##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM474488v1
#!genome-build-accession NCBI_Assembly:GCF_004744885.1
#!annotation-date 08/16/2025 10:52:59
#!annotation-source NCBI RefSeq GCF_004744885.1-RS_2025_08_16
##sequence-region NZ_PYJR01000131.1 1 4298
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000131.1	RefSeq	region	1	4298	.	+	.	ID=NZ_PYJR01000131.1:1..4298;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000131.1	RefSeq	gene	1	190	.	-	.	ID=gene-C9E94_RS19490;Name=C9E94_RS19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19490;old_locus_tag=C9E94_19985;partial=true;start_range=.,1
NZ_PYJR01000131.1	Protein Homology	CDS	1	190	.	-	0	ID=cds-WP_021498352.1;Parent=gene-C9E94_RS19490;Dbxref=GenBank:WP_021498352.1;Name=WP_021498352.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=C9E94_RS19490;partial=true;product=GTP-binding protein;protein_id=WP_021498352.1;start_range=.,1;transl_table=11
NZ_PYJR01000131.1	RefSeq	gene	306	381	.	-	.	ID=gene-C9E94_RS19495;Name=C9E94_RS19495;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS19495;old_locus_tag=C9E94_19990
NZ_PYJR01000131.1	tRNAscan-SE	tRNA	306	381	.	-	.	ID=rna-C9E94_RS19495;Parent=gene-C9E94_RS19495;anticodon=(pos:complement(346..348));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS19495;product=tRNA-Thr
NZ_PYJR01000131.1	tRNAscan-SE	exon	306	381	.	-	.	ID=exon-C9E94_RS19495-1;Parent=rna-C9E94_RS19495;anticodon=(pos:complement(346..348));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS19495;product=tRNA-Thr
NZ_PYJR01000131.1	RefSeq	gene	388	462	.	-	.	ID=gene-C9E94_RS19500;Name=C9E94_RS19500;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS19500;old_locus_tag=C9E94_19995
NZ_PYJR01000131.1	tRNAscan-SE	tRNA	388	462	.	-	.	ID=rna-C9E94_RS19500;Parent=gene-C9E94_RS19500;anticodon=(pos:complement(427..429));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS19500;product=tRNA-Gly
NZ_PYJR01000131.1	tRNAscan-SE	exon	388	462	.	-	.	ID=exon-C9E94_RS19500-1;Parent=rna-C9E94_RS19500;anticodon=(pos:complement(427..429));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS19500;product=tRNA-Gly
NZ_PYJR01000131.1	RefSeq	gene	579	663	.	-	.	ID=gene-C9E94_RS19505;Name=C9E94_RS19505;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS19505;old_locus_tag=C9E94_20000
NZ_PYJR01000131.1	tRNAscan-SE	tRNA	579	663	.	-	.	ID=rna-C9E94_RS19505;Parent=gene-C9E94_RS19505;anticodon=(pos:complement(627..629));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS19505;product=tRNA-Tyr
NZ_PYJR01000131.1	tRNAscan-SE	exon	579	663	.	-	.	ID=exon-C9E94_RS19505-1;Parent=rna-C9E94_RS19505;anticodon=(pos:complement(627..629));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS19505;product=tRNA-Tyr
NZ_PYJR01000131.1	RefSeq	gene	672	747	.	-	.	ID=gene-C9E94_RS19510;Name=C9E94_RS19510;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS19510;old_locus_tag=C9E94_20005
NZ_PYJR01000131.1	tRNAscan-SE	tRNA	672	747	.	-	.	ID=rna-C9E94_RS19510;Parent=gene-C9E94_RS19510;anticodon=(pos:complement(712..714));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS19510;product=tRNA-Thr
NZ_PYJR01000131.1	tRNAscan-SE	exon	672	747	.	-	.	ID=exon-C9E94_RS19510-1;Parent=rna-C9E94_RS19510;anticodon=(pos:complement(712..714));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS19510;product=tRNA-Thr
NZ_PYJR01000131.1	RefSeq	gene	767	940	.	+	.	ID=gene-C9E94_RS19515;Name=C9E94_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19515;old_locus_tag=C9E94_20010
NZ_PYJR01000131.1	Protein Homology	CDS	767	940	.	+	0	ID=cds-WP_001541267.1;Parent=gene-C9E94_RS19515;Dbxref=GenBank:WP_001541267.1;Name=WP_001541267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463014.1;locus_tag=C9E94_RS19515;product=hypothetical protein;protein_id=WP_001541267.1;transl_table=11
NZ_PYJR01000131.1	RefSeq	gene	1149	2099	.	+	.	ID=gene-C9E94_RS19520;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=C9E94_RS19520;old_locus_tag=C9E94_20020
NZ_PYJR01000131.1	Protein Homology	CDS	1149	2099	.	+	0	ID=cds-WP_000023069.1;Parent=gene-C9E94_RS19520;Dbxref=GenBank:WP_000023069.1;Name=WP_000023069.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=C9E94_RS19520;product=type I pantothenate kinase;protein_id=WP_000023069.1;transl_table=11
NZ_PYJR01000131.1	RefSeq	gene	2134	3096	.	-	.	ID=gene-C9E94_RS19525;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=C9E94_RS19525;old_locus_tag=C9E94_20025
NZ_PYJR01000131.1	Protein Homology	CDS	2134	3096	.	-	0	ID=cds-WP_000655752.1;Parent=gene-C9E94_RS19525;Dbxref=GenBank:WP_000655752.1;Name=WP_000655752.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463012.1;locus_tag=C9E94_RS19525;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_000655752.1;transl_table=11
NZ_PYJR01000131.1	RefSeq	gene	3093	4121	.	-	.	ID=gene-C9E94_RS19530;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=C9E94_RS19530;old_locus_tag=C9E94_20030
NZ_PYJR01000131.1	Protein Homology	CDS	3093	4121	.	-	0	ID=cds-WP_000149795.1;Parent=gene-C9E94_RS19530;Dbxref=GenBank:WP_000149795.1;Name=WP_000149795.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463011.1;locus_tag=C9E94_RS19530;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_000149795.1;transl_table=11
##sequence-region NZ_PYJR01000118.1 1 2931
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000118.1	RefSeq	region	1	2931	.	+	.	ID=NZ_PYJR01000118.1:1..2931;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000118.1	RefSeq	gene	276	638	.	+	.	ID=gene-C9E94_RS17900;Name=C9E94_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17900;old_locus_tag=C9E94_18335
NZ_PYJR01000118.1	Protein Homology	CDS	276	638	.	+	0	ID=cds-WP_000472034.1;Parent=gene-C9E94_RS17900;Dbxref=GenBank:WP_000472034.1;Name=WP_000472034.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461352.1;locus_tag=C9E94_RS17900;product=MerR family transcriptional regulator;protein_id=WP_000472034.1;transl_table=11
NZ_PYJR01000118.1	RefSeq	gene	640	1032	.	+	.	ID=gene-C9E94_RS17905;Name=C9E94_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17905;old_locus_tag=C9E94_18340
NZ_PYJR01000118.1	Protein Homology	CDS	640	1032	.	+	0	ID=cds-WP_000826514.1;Parent=gene-C9E94_RS17905;Dbxref=GenBank:WP_000826514.1;Name=WP_000826514.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461353.1;locus_tag=C9E94_RS17905;product=MerR family transcriptional regulator;protein_id=WP_000826514.1;transl_table=11
NZ_PYJR01000118.1	RefSeq	gene	1086	2501	.	-	.	ID=gene-C9E94_RS17910;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=C9E94_RS17910;old_locus_tag=C9E94_18345
NZ_PYJR01000118.1	Protein Homology	CDS	1086	2501	.	-	0	ID=cds-WP_000695623.1;Parent=gene-C9E94_RS17910;Dbxref=GenBank:WP_000695623.1;Name=WP_000695623.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461354.1;locus_tag=C9E94_RS17910;product=glutamate--tRNA ligase;protein_id=WP_000695623.1;transl_table=11
NZ_PYJR01000118.1	RefSeq	gene	2760	2835	.	+	.	ID=gene-C9E94_RS17915;Name=C9E94_RS17915;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS17915;old_locus_tag=C9E94_18350
NZ_PYJR01000118.1	tRNAscan-SE	tRNA	2760	2835	.	+	.	ID=rna-C9E94_RS17915;Parent=gene-C9E94_RS17915;anticodon=(pos:2793..2795);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS17915;product=tRNA-Val
NZ_PYJR01000118.1	tRNAscan-SE	exon	2760	2835	.	+	.	ID=exon-C9E94_RS17915-1;Parent=rna-C9E94_RS17915;anticodon=(pos:2793..2795);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS17915;product=tRNA-Val
##sequence-region NZ_PYJR01000043.1 1 2427
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000043.1	RefSeq	region	1	2427	.	+	.	ID=NZ_PYJR01000043.1:1..2427;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000043.1	RefSeq	gene	134	1015	.	+	.	ID=gene-C9E94_RS05335;Name=C9E94_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05335;old_locus_tag=C9E94_05480
NZ_PYJR01000043.1	Protein Homology	CDS	134	1015	.	+	0	ID=cds-WP_135400853.1;Parent=gene-C9E94_RS05335;Dbxref=GenBank:WP_135400853.1;Name=WP_135400853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517106.1;locus_tag=C9E94_RS05335;product=integrase domain-containing protein;protein_id=WP_135400853.1;transl_table=11
NZ_PYJR01000043.1	RefSeq	gene	1500	2427	.	+	.	ID=gene-C9E94_RS05340;Name=C9E94_RS05340;end_range=2427,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05340;old_locus_tag=C9E94_05485;partial=true
NZ_PYJR01000043.1	Protein Homology	CDS	1500	2427	.	+	0	ID=cds-WP_135400854.1;Parent=gene-C9E94_RS05340;Dbxref=GenBank:WP_135400854.1;Name=WP_135400854.1;Ontology_term=GO:0006231,GO:0032259,GO:0004799,GO:0008168,GO:0016740;end_range=2427,.;gbkey=CDS;go_function=thymidylate synthase activity|0004799||IEA,methyltransferase activity|0008168||IEA,transferase activity|0016740||IEA;go_process=dTMP biosynthetic process|0006231||IEA,methylation|0032259||IEA;inference=COORDINATES: protein motif:HMM:NF012524.6;locus_tag=C9E94_RS05340;partial=true;product=thymidylate synthase;protein_id=WP_135400854.1;transl_table=11
##sequence-region NZ_PYJR01000035.1 1 2394
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000035.1	RefSeq	region	1	2394	.	+	.	ID=NZ_PYJR01000035.1:1..2394;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000035.1	RefSeq	gene	61	255	.	+	.	ID=gene-C9E94_RS03865;Name=C9E94_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03865;old_locus_tag=C9E94_03955
NZ_PYJR01000035.1	GeneMarkS-2+	CDS	61	255	.	+	0	ID=cds-WP_000525382.1;Parent=gene-C9E94_RS03865;Dbxref=GenBank:WP_000525382.1;Name=WP_000525382.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS03865;product=hypothetical protein;protein_id=WP_000525382.1;transl_table=11
NZ_PYJR01000035.1	RefSeq	gene	413	868	.	-	.	ID=gene-C9E94_RS03875;Name=C9E94_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03875;old_locus_tag=C9E94_03960
NZ_PYJR01000035.1	Protein Homology	CDS	413	868	.	-	0	ID=cds-WP_000128242.1;Parent=gene-C9E94_RS03875;Dbxref=GenBank:WP_000128242.1;Name=WP_000128242.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462082.1;locus_tag=C9E94_RS03875;product=HIT family protein;protein_id=WP_000128242.1;transl_table=11
NZ_PYJR01000035.1	RefSeq	pseudogene	913	2392	.	-	.	ID=gene-C9E94_RS03880;Name=C9E94_RS03880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS03880;old_locus_tag=C9E94_03965;pseudo=true
NZ_PYJR01000035.1	Protein Homology	CDS	913	2392	.	-	0	ID=cds-C9E94_RS03880;Parent=gene-C9E94_RS03880;Note=frameshifted;Ontology_term=GO:0006820,GO:0008509,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462081.3;locus_tag=C9E94_RS03880;product=DASS family sodium-coupled anion symporter;pseudo=true;transl_table=11
##sequence-region NZ_PYJR01000014.1 1 2354
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000014.1	RefSeq	region	1	2354	.	+	.	ID=NZ_PYJR01000014.1:1..2354;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000014.1	RefSeq	gene	41	688	.	+	.	ID=gene-C9E94_RS01395;Name=C9E94_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01395;old_locus_tag=C9E94_01425
NZ_PYJR01000014.1	Protein Homology	CDS	41	688	.	+	0	ID=cds-WP_000983441.1;Parent=gene-C9E94_RS01395;Dbxref=GenBank:WP_000983441.1;Name=WP_000983441.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462129.1;locus_tag=C9E94_RS01395;product=PadR family transcriptional regulator;protein_id=WP_000983441.1;transl_table=11
NZ_PYJR01000014.1	RefSeq	gene	685	2250	.	-	.	ID=gene-C9E94_RS01400;Name=C9E94_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01400;old_locus_tag=C9E94_01430
NZ_PYJR01000014.1	Protein Homology	CDS	685	2250	.	-	0	ID=cds-WP_000478472.1;Parent=gene-C9E94_RS01400;Dbxref=GenBank:WP_000478472.1;Name=WP_000478472.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462130.1;locus_tag=C9E94_RS01400;product=methyl-accepting chemotaxis protein;protein_id=WP_000478472.1;transl_table=11
##sequence-region NZ_PYJR01000077.1 1 2221
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000077.1	RefSeq	region	1	2221	.	+	.	ID=NZ_PYJR01000077.1:1..2221;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000077.1	RefSeq	pseudogene	1	494	.	+	.	ID=gene-C9E94_RS09865;Name=C9E94_RS09865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS09865;old_locus_tag=C9E94_10080;partial=true;pseudo=true;start_range=.,1
NZ_PYJR01000077.1	Protein Homology	CDS	1	494	.	+	2	ID=cds-C9E94_RS09865;Parent=gene-C9E94_RS09865;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459551.1;locus_tag=C9E94_RS09865;partial=true;product=glycosyltransferase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYJR01000077.1	RefSeq	gene	494	964	.	+	.	ID=gene-C9E94_RS09870;Name=C9E94_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09870;old_locus_tag=C9E94_10085
NZ_PYJR01000077.1	GeneMarkS-2+	CDS	494	964	.	+	0	ID=cds-WP_115285268.1;Parent=gene-C9E94_RS09870;Dbxref=GenBank:WP_115285268.1;Name=WP_115285268.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS09870;product=hypothetical protein;protein_id=WP_115285268.1;transl_table=11
NZ_PYJR01000077.1	RefSeq	gene	951	2198	.	+	.	ID=gene-C9E94_RS09875;Name=C9E94_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09875;old_locus_tag=C9E94_10090
NZ_PYJR01000077.1	Protein Homology	CDS	951	2198	.	+	0	ID=cds-WP_135400968.1;Parent=gene-C9E94_RS09875;Dbxref=GenBank:WP_135400968.1;Name=WP_135400968.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039639.5;locus_tag=C9E94_RS09875;product=DUF6056 family protein;protein_id=WP_135400968.1;transl_table=11
##sequence-region NZ_PYJR01000036.1 1 2118
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000036.1	RefSeq	region	1	2118	.	+	.	ID=NZ_PYJR01000036.1:1..2118;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000036.1	RefSeq	pseudogene	1	1213	.	+	.	ID=gene-C9E94_RS03885;Name=siiF;gbkey=Gene;gene=siiF;gene_biotype=pseudogene;locus_tag=C9E94_RS03885;old_locus_tag=C9E94_03970;partial=true;pseudo=true;start_range=.,1
NZ_PYJR01000036.1	Protein Homology	CDS	1	1213	.	+	1	ID=cds-C9E94_RS03885;Parent=gene-C9E94_RS03885;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=siiF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954991.1;locus_tag=C9E94_RS03885;partial=true;product=SPI-4 type I secretion system protein SiiF;pseudo=true;start_range=.,1;transl_table=11
NZ_PYJR01000036.1	RefSeq	gene	1490	1771	.	-	.	ID=gene-C9E94_RS03890;Name=C9E94_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03890;old_locus_tag=C9E94_03975
NZ_PYJR01000036.1	Protein Homology	CDS	1490	1771	.	-	0	ID=cds-WP_000719058.1;Parent=gene-C9E94_RS03890;Dbxref=GenBank:WP_000719058.1;Name=WP_000719058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463128.1;locus_tag=C9E94_RS03890;product=YjcB family protein;protein_id=WP_000719058.1;transl_table=11
##sequence-region NZ_PYJR01000130.1 1 1821
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000130.1	RefSeq	region	1	1821	.	+	.	ID=NZ_PYJR01000130.1:1..1821;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000130.1	RefSeq	gene	87	542	.	-	.	ID=gene-C9E94_RS19480;Name=C9E94_RS19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19480;old_locus_tag=C9E94_19975
NZ_PYJR01000130.1	Protein Homology	CDS	87	542	.	-	0	ID=cds-WP_135401188.1;Parent=gene-C9E94_RS19480;Dbxref=GenBank:WP_135401188.1;Name=WP_135401188.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463046.1;locus_tag=C9E94_RS19480;product=acetyltransferase;protein_id=WP_135401188.1;transl_table=11
NZ_PYJR01000130.1	RefSeq	gene	699	1628	.	+	.	ID=gene-C9E94_RS19485;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=C9E94_RS19485;old_locus_tag=C9E94_19980
NZ_PYJR01000130.1	Protein Homology	CDS	699	1628	.	+	0	ID=cds-WP_001122767.1;Parent=gene-C9E94_RS19485;Dbxref=GenBank:WP_001122767.1;Name=WP_001122767.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=C9E94_RS19485;product=homoserine O-acetyltransferase MetA;protein_id=WP_001122767.1;transl_table=11
##sequence-region NZ_PYJR01000121.1 1 1815
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000121.1	RefSeq	region	1	1815	.	+	.	ID=NZ_PYJR01000121.1:1..1815;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000121.1	RefSeq	gene	104	529	.	+	.	ID=gene-C9E94_RS18120;Name=C9E94_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18120;old_locus_tag=C9E94_18555
NZ_PYJR01000121.1	Protein Homology	CDS	104	529	.	+	0	ID=cds-WP_024143826.1;Parent=gene-C9E94_RS18120;Dbxref=GenBank:WP_024143826.1;Name=WP_024143826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015675523.1;locus_tag=C9E94_RS18120;product=hypothetical protein;protein_id=WP_024143826.1;transl_table=11
NZ_PYJR01000121.1	RefSeq	gene	526	1746	.	-	.	ID=gene-C9E94_RS18125;Name=C9E94_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18125;old_locus_tag=C9E94_18560
NZ_PYJR01000121.1	Protein Homology	CDS	526	1746	.	-	0	ID=cds-WP_000343758.1;Parent=gene-C9E94_RS18125;Dbxref=GenBank:WP_000343758.1;Name=WP_000343758.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_065945178.1;locus_tag=C9E94_RS18125;product=ISL3 family transposase;protein_id=WP_000343758.1;transl_table=11
##sequence-region NZ_PYJR01000052.1 1 96935
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000052.1	RefSeq	region	1	96935	.	+	.	ID=NZ_PYJR01000052.1:1..96935;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000052.1	RefSeq	gene	64	179	.	+	.	ID=gene-C9E94_RS06705;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9E94_RS06705;old_locus_tag=C9E94_06875
NZ_PYJR01000052.1	cmsearch	rRNA	64	179	.	+	.	ID=rna-C9E94_RS06705;Parent=gene-C9E94_RS06705;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS06705;product=5S ribosomal RNA
NZ_PYJR01000052.1	cmsearch	exon	64	179	.	+	.	ID=exon-C9E94_RS06705-1;Parent=rna-C9E94_RS06705;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS06705;product=5S ribosomal RNA
NZ_PYJR01000052.1	RefSeq	gene	388	843	.	+	.	ID=gene-C9E94_RS06710;Name=C9E94_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06710;old_locus_tag=C9E94_06880
NZ_PYJR01000052.1	Protein Homology	CDS	388	843	.	+	0	ID=cds-WP_000985653.1;Parent=gene-C9E94_RS06710;Dbxref=GenBank:WP_000985653.1;Name=WP_000985653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461590.1;locus_tag=C9E94_RS06710;product=DUF4385 domain-containing protein;protein_id=WP_000985653.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	947	2248	.	+	.	ID=gene-C9E94_RS06715;Name=C9E94_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06715;old_locus_tag=C9E94_06885
NZ_PYJR01000052.1	Protein Homology	CDS	947	2248	.	+	0	ID=cds-WP_000807818.1;Parent=gene-C9E94_RS06715;Dbxref=GenBank:WP_000807818.1;Name=WP_000807818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461589.1;locus_tag=C9E94_RS06715;product=MFS transporter;protein_id=WP_000807818.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	2245	2568	.	-	.	ID=gene-C9E94_RS06720;Name=C9E94_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06720;old_locus_tag=C9E94_06890
NZ_PYJR01000052.1	Protein Homology	CDS	2245	2568	.	-	0	ID=cds-WP_001264473.1;Parent=gene-C9E94_RS06720;Dbxref=GenBank:WP_001264473.1;Name=WP_001264473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461588.1;locus_tag=C9E94_RS06720;product=YfiM family lipoprotein;protein_id=WP_001264473.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	2613	3968	.	-	.	ID=gene-C9E94_RS06725;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=C9E94_RS06725;old_locus_tag=C9E94_06895
NZ_PYJR01000052.1	Protein Homology	CDS	2613	3968	.	-	0	ID=cds-WP_000949286.1;Parent=gene-C9E94_RS06725;Dbxref=GenBank:WP_000949286.1;Name=WP_000949286.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=C9E94_RS06725;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_000949286.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	4083	6743	.	-	.	ID=gene-C9E94_RS06730;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=C9E94_RS06730;old_locus_tag=C9E94_06900
NZ_PYJR01000052.1	Protein Homology	CDS	4083	6743	.	-	0	ID=cds-WP_076727029.1;Parent=gene-C9E94_RS06730;Dbxref=GenBank:WP_076727029.1;Name=WP_076727029.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=C9E94_RS06730;product=protein lysine acetyltransferase;protein_id=WP_076727029.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	6797	7477	.	-	.	ID=gene-C9E94_RS06735;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=C9E94_RS06735;old_locus_tag=C9E94_06905
NZ_PYJR01000052.1	Protein Homology	CDS	6797	7477	.	-	0	ID=cds-WP_000183642.1;Parent=gene-C9E94_RS06735;Dbxref=GenBank:WP_000183642.1;Name=WP_000183642.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461585.1;locus_tag=C9E94_RS06735;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_000183642.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	7550	7969	.	-	.	ID=gene-C9E94_RS06740;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=C9E94_RS06740;old_locus_tag=C9E94_06910
NZ_PYJR01000052.1	Protein Homology	CDS	7550	7969	.	-	0	ID=cds-WP_001098732.1;Parent=gene-C9E94_RS06740;Dbxref=GenBank:WP_001098732.1;Name=WP_001098732.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461584.1;locus_tag=C9E94_RS06740;product=thioredoxin TrxC;protein_id=WP_001098732.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	8173	9210	.	+	.	ID=gene-C9E94_RS06745;Name=C9E94_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06745;old_locus_tag=C9E94_06915
NZ_PYJR01000052.1	Protein Homology	CDS	8173	9210	.	+	0	ID=cds-WP_000997368.1;Parent=gene-C9E94_RS06745;Dbxref=GenBank:WP_000997368.1;Name=WP_000997368.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461583.1;locus_tag=C9E94_RS06745;product=tRNA/rRNA methyltransferase;protein_id=WP_000997368.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	9327	10016	.	-	.	ID=gene-C9E94_RS06750;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=C9E94_RS06750;old_locus_tag=C9E94_06920
NZ_PYJR01000052.1	Protein Homology	CDS	9327	10016	.	-	0	ID=cds-WP_000179978.1;Parent=gene-C9E94_RS06750;Dbxref=GenBank:WP_000179978.1;Name=WP_000179978.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461582.1;locus_tag=C9E94_RS06750;product=uracil-DNA glycosylase;protein_id=WP_000179978.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	10335	10718	.	+	.	ID=gene-C9E94_RS06755;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=C9E94_RS06755;old_locus_tag=C9E94_06925
NZ_PYJR01000052.1	Protein Homology	CDS	10335	10718	.	+	0	ID=cds-WP_000627811.1;Parent=gene-C9E94_RS06755;Dbxref=GenBank:WP_000627811.1;Name=WP_000627811.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=C9E94_RS06755;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627811.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	10780	11367	.	-	.	ID=gene-C9E94_RS06760;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=C9E94_RS06760;old_locus_tag=C9E94_06930
NZ_PYJR01000052.1	Protein Homology	CDS	10780	11367	.	-	0	ID=cds-WP_000188410.1;Parent=gene-C9E94_RS06760;Dbxref=GenBank:WP_000188410.1;Name=WP_000188410.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461580.1;locus_tag=C9E94_RS06760;product=cysteine/O-acetylserine transporter;protein_id=WP_000188410.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	11470	12369	.	+	.	ID=gene-C9E94_RS06765;Name=C9E94_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06765;old_locus_tag=C9E94_06935
NZ_PYJR01000052.1	Protein Homology	CDS	11470	12369	.	+	0	ID=cds-WP_000365861.1;Parent=gene-C9E94_RS06765;Dbxref=GenBank:WP_000365861.1;Name=WP_000365861.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461579.1;locus_tag=C9E94_RS06765;product=LysR family transcriptional regulator;protein_id=WP_000365861.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	12387	13715	.	-	.	ID=gene-C9E94_RS06770;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=C9E94_RS06770;old_locus_tag=C9E94_06940
NZ_PYJR01000052.1	Protein Homology	CDS	12387	13715	.	-	0	ID=cds-WP_023218617.1;Parent=gene-C9E94_RS06770;Dbxref=GenBank:WP_023218617.1;Name=WP_023218617.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461578.1;locus_tag=C9E94_RS06770;product=ATP-dependent RNA helicase SrmB;protein_id=WP_023218617.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	13845	14582	.	+	.	ID=gene-C9E94_RS06775;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=C9E94_RS06775;old_locus_tag=C9E94_06945
NZ_PYJR01000052.1	Protein Homology	CDS	13845	14582	.	+	0	ID=cds-WP_000083347.1;Parent=gene-C9E94_RS06775;Dbxref=GenBank:WP_000083347.1;Name=WP_000083347.1;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461577.1;locus_tag=C9E94_RS06775;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_000083347.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	14567	16189	.	-	.	ID=gene-C9E94_RS06780;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=C9E94_RS06780;old_locus_tag=C9E94_06950
NZ_PYJR01000052.1	Protein Homology	CDS	14567	16189	.	-	0	ID=cds-WP_000989184.1;Parent=gene-C9E94_RS06780;Dbxref=GenBank:WP_000989184.1;Name=WP_000989184.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461576.1;locus_tag=C9E94_RS06780;product=L-aspartate oxidase;protein_id=WP_000989184.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	16454	16618	.	+	.	ID=gene-C9E94_RS06790;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=C9E94_RS06790
NZ_PYJR01000052.1	Protein Homology	CDS	16454	16618	.	+	0	ID=cds-WP_014344135.1;Parent=gene-C9E94_RS06790;Dbxref=GenBank:WP_014344135.1;Name=WP_014344135.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344135.1;locus_tag=C9E94_RS06790;product=rpoE leader peptide RseD;protein_id=WP_014344135.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	16615	17190	.	+	.	ID=gene-C9E94_RS06795;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=C9E94_RS06795;old_locus_tag=C9E94_06960
NZ_PYJR01000052.1	Protein Homology	CDS	16615	17190	.	+	0	ID=cds-WP_000003307.1;Parent=gene-C9E94_RS06795;Dbxref=GenBank:WP_000003307.1;Name=WP_000003307.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=C9E94_RS06795;product=RNA polymerase sigma factor RpoE;protein_id=WP_000003307.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	17222	17872	.	+	.	ID=gene-C9E94_RS06800;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=C9E94_RS06800;old_locus_tag=C9E94_06965
NZ_PYJR01000052.1	Protein Homology	CDS	17222	17872	.	+	0	ID=cds-WP_020839156.1;Parent=gene-C9E94_RS06800;Dbxref=GenBank:WP_020839156.1;Name=WP_020839156.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461574.1;locus_tag=C9E94_RS06800;product=anti-sigma-E factor RseA;protein_id=WP_020839156.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	17872	18828	.	+	.	ID=gene-C9E94_RS06805;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=C9E94_RS06805;old_locus_tag=C9E94_06970
NZ_PYJR01000052.1	Protein Homology	CDS	17872	18828	.	+	0	ID=cds-WP_023201326.1;Parent=gene-C9E94_RS06805;Dbxref=GenBank:WP_023201326.1;Name=WP_023201326.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461573.1;locus_tag=C9E94_RS06805;product=sigma-E factor regulatory protein RseB;protein_id=WP_023201326.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	18825	19304	.	+	.	ID=gene-C9E94_RS06810;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=C9E94_RS06810;old_locus_tag=C9E94_06975
NZ_PYJR01000052.1	Protein Homology	CDS	18825	19304	.	+	0	ID=cds-WP_135400892.1;Parent=gene-C9E94_RS06810;Dbxref=GenBank:WP_135400892.1;Name=WP_135400892.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461572.1;locus_tag=C9E94_RS06810;product=SoxR-reducing system protein RseC;protein_id=WP_135400892.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	19556	21355	.	+	.	ID=gene-C9E94_RS06820;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=C9E94_RS06820;old_locus_tag=C9E94_06985
NZ_PYJR01000052.1	Protein Homology	CDS	19556	21355	.	+	0	ID=cds-WP_000790154.1;Parent=gene-C9E94_RS06820;Dbxref=GenBank:WP_000790154.1;Name=WP_000790154.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461518.1;locus_tag=C9E94_RS06820;product=translation elongation factor 4;protein_id=WP_000790154.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	21372	22346	.	+	.	ID=gene-C9E94_RS06825;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=C9E94_RS06825;old_locus_tag=C9E94_06990
NZ_PYJR01000052.1	Protein Homology	CDS	21372	22346	.	+	0	ID=cds-WP_000002559.1;Parent=gene-C9E94_RS06825;Dbxref=GenBank:WP_000002559.1;Name=WP_000002559.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461517.1;locus_tag=C9E94_RS06825;product=signal peptidase I;protein_id=WP_000002559.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	22620	23300	.	+	.	ID=gene-C9E94_RS06830;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=C9E94_RS06830;old_locus_tag=C9E94_07000
NZ_PYJR01000052.1	Protein Homology	CDS	22620	23300	.	+	0	ID=cds-WP_001068341.1;Parent=gene-C9E94_RS06830;Dbxref=GenBank:WP_001068341.1;Name=WP_001068341.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=C9E94_RS06830;product=ribonuclease III;protein_id=WP_001068341.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	23297	24202	.	+	.	ID=gene-C9E94_RS06835;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=C9E94_RS06835;old_locus_tag=C9E94_07005
NZ_PYJR01000052.1	Protein Homology	CDS	23297	24202	.	+	0	ID=cds-WP_000102232.1;Parent=gene-C9E94_RS06835;Dbxref=GenBank:WP_000102232.1;Name=WP_000102232.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461515.1;locus_tag=C9E94_RS06835;product=GTPase Era;protein_id=WP_000102232.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	24214	24942	.	+	.	ID=gene-C9E94_RS06840;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=C9E94_RS06840;old_locus_tag=C9E94_07010
NZ_PYJR01000052.1	Protein Homology	CDS	24214	24942	.	+	0	ID=cds-WP_000399380.1;Parent=gene-C9E94_RS06840;Dbxref=GenBank:WP_000399380.1;Name=WP_000399380.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461514.1;locus_tag=C9E94_RS06840;product=DNA repair protein RecO;protein_id=WP_000399380.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	24954	25685	.	+	.	ID=gene-C9E94_RS06845;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=C9E94_RS06845;old_locus_tag=C9E94_07015
NZ_PYJR01000052.1	Protein Homology	CDS	24954	25685	.	+	0	ID=cds-WP_000818972.1;Parent=gene-C9E94_RS06845;Dbxref=GenBank:WP_000818972.1;Name=WP_000818972.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461513.1;locus_tag=C9E94_RS06845;product=pyridoxine 5'-phosphate synthase;protein_id=WP_000818972.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	25685	26065	.	+	.	ID=gene-C9E94_RS06850;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=C9E94_RS06850;old_locus_tag=C9E94_07020
NZ_PYJR01000052.1	Protein Homology	CDS	25685	26065	.	+	0	ID=cds-WP_000986043.1;Parent=gene-C9E94_RS06850;Dbxref=GenBank:WP_000986043.1;Name=WP_000986043.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461512.1;locus_tag=C9E94_RS06850;product=holo-ACP synthase;protein_id=WP_000986043.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	26177	26437	.	-	.	ID=gene-C9E94_RS06855;Name=C9E94_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06855;old_locus_tag=C9E94_07025
NZ_PYJR01000052.1	Protein Homology	CDS	26177	26437	.	-	0	ID=cds-WP_001196290.1;Parent=gene-C9E94_RS06855;Dbxref=GenBank:WP_001196290.1;Name=WP_001196290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461511.1;locus_tag=C9E94_RS06855;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_001196290.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	26475	27401	.	-	.	ID=gene-C9E94_RS06860;Name=C9E94_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06860;old_locus_tag=C9E94_07030
NZ_PYJR01000052.1	Protein Homology	CDS	26475	27401	.	-	0	ID=cds-WP_001022463.1;Parent=gene-C9E94_RS06860;Dbxref=GenBank:WP_001022463.1;Name=WP_001022463.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461510.1;locus_tag=C9E94_RS06860;product=LysR family transcriptional regulator;protein_id=WP_001022463.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	27517	28713	.	+	.	ID=gene-C9E94_RS06865;Name=C9E94_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06865;old_locus_tag=C9E94_07035
NZ_PYJR01000052.1	Protein Homology	CDS	27517	28713	.	+	0	ID=cds-WP_001276365.1;Parent=gene-C9E94_RS06865;Dbxref=GenBank:WP_001276365.1;Name=WP_001276365.1;Ontology_term=GO:0015129;gbkey=CDS;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461509.1;locus_tag=C9E94_RS06865;product=L-lactate MFS transporter;protein_id=WP_001276365.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	28735	29652	.	+	.	ID=gene-C9E94_RS06870;Name=C9E94_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06870;old_locus_tag=C9E94_07040
NZ_PYJR01000052.1	Protein Homology	CDS	28735	29652	.	+	0	ID=cds-WP_000684022.1;Parent=gene-C9E94_RS06870;Dbxref=GenBank:WP_000684022.1;Name=WP_000684022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461508.1;locus_tag=C9E94_RS06870;product=oxidoreductase;protein_id=WP_000684022.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	29691	30539	.	-	.	ID=gene-C9E94_RS06875;Name=C9E94_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06875;old_locus_tag=C9E94_07045
NZ_PYJR01000052.1	Protein Homology	CDS	29691	30539	.	-	0	ID=cds-WP_080214248.1;Parent=gene-C9E94_RS06875;Dbxref=GenBank:WP_080214248.1;Name=WP_080214248.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461507.1;locus_tag=C9E94_RS06875;product=MurR/RpiR family transcriptional regulator;protein_id=WP_080214248.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	30655	31548	.	+	.	ID=gene-C9E94_RS06880;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=C9E94_RS06880;old_locus_tag=C9E94_07050
NZ_PYJR01000052.1	Protein Homology	CDS	30655	31548	.	+	0	ID=cds-WP_001048534.1;Parent=gene-C9E94_RS06880;Dbxref=GenBank:WP_001048534.1;Name=WP_001048534.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461506.1;locus_tag=C9E94_RS06880;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_001048534.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	31559	32920	.	+	.	ID=gene-C9E94_RS06885;Name=C9E94_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06885;old_locus_tag=C9E94_07055
NZ_PYJR01000052.1	Protein Homology	CDS	31559	32920	.	+	0	ID=cds-WP_000361660.1;Parent=gene-C9E94_RS06885;Dbxref=GenBank:WP_000361660.1;Name=WP_000361660.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461505.1;locus_tag=C9E94_RS06885;product=PTS transporter subunit EIIC;protein_id=WP_000361660.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	32924	33559	.	+	.	ID=gene-C9E94_RS06890;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=C9E94_RS06890;old_locus_tag=C9E94_07060
NZ_PYJR01000052.1	Protein Homology	CDS	32924	33559	.	+	0	ID=cds-WP_000253558.1;Parent=gene-C9E94_RS06890;Dbxref=GenBank:WP_000253558.1;Name=WP_000253558.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=C9E94_RS06890;product=phosphatidylglycerophosphatase C;protein_id=WP_000253558.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	33584	34135	.	+	.	ID=gene-C9E94_RS06895;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=C9E94_RS06895;old_locus_tag=C9E94_07065
NZ_PYJR01000052.1	Protein Homology	CDS	33584	34135	.	+	0	ID=cds-WP_135400893.1;Parent=gene-C9E94_RS06895;Dbxref=GenBank:WP_135400893.1;Name=WP_135400893.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461503.1;locus_tag=C9E94_RS06895;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_135400893.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	34186	35730	.	-	.	ID=gene-C9E94_RS06900;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=C9E94_RS06900;old_locus_tag=C9E94_07070
NZ_PYJR01000052.1	Protein Homology	CDS	34186	35730	.	-	0	ID=cds-WP_000734241.1;Parent=gene-C9E94_RS06900;Dbxref=GenBank:WP_000734241.1;Name=WP_000734241.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=C9E94_RS06900;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_000734241.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	35731	35961	.	-	.	ID=gene-C9E94_RS06905;Name=C9E94_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06905;old_locus_tag=C9E94_07075
NZ_PYJR01000052.1	Protein Homology	CDS	35731	35961	.	-	0	ID=cds-WP_001667158.1;Parent=gene-C9E94_RS06905;Dbxref=GenBank:WP_001667158.1;Name=WP_001667158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669324.1;locus_tag=C9E94_RS06905;product=hypothetical protein;protein_id=WP_001667158.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	35986	39873	.	+	.	ID=gene-C9E94_RS06910;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=C9E94_RS06910;old_locus_tag=C9E94_07080
NZ_PYJR01000052.1	Protein Homology	CDS	35986	39873	.	+	0	ID=cds-WP_135400894.1;Parent=gene-C9E94_RS06910;Dbxref=GenBank:WP_135400894.1;Name=WP_135400894.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461500.1;locus_tag=C9E94_RS06910;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_135400894.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	40523	41953	.	+	.	ID=gene-C9E94_RS06915;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=C9E94_RS06915;old_locus_tag=C9E94_07085
NZ_PYJR01000052.1	Protein Homology	CDS	40523	41953	.	+	0	ID=cds-WP_001676035.1;Parent=gene-C9E94_RS06915;Dbxref=GenBank:WP_001676035.1;Name=WP_001676035.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001676035.1;locus_tag=C9E94_RS06915;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_001676035.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	41955	42719	.	+	.	ID=gene-C9E94_RS06920;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=C9E94_RS06920;old_locus_tag=C9E94_07090
NZ_PYJR01000052.1	Protein Homology	CDS	41955	42719	.	+	0	ID=cds-WP_111742263.1;Parent=gene-C9E94_RS06920;Dbxref=GenBank:WP_111742263.1;Name=WP_111742263.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461498.1;locus_tag=C9E94_RS06920;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_111742263.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	42719	44053	.	+	.	ID=gene-C9E94_RS06925;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=C9E94_RS06925;old_locus_tag=C9E94_07095
NZ_PYJR01000052.1	Protein Homology	CDS	42719	44053	.	+	0	ID=cds-WP_024131115.1;Parent=gene-C9E94_RS06925;Dbxref=GenBank:WP_024131115.1;Name=WP_024131115.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311447.1;locus_tag=C9E94_RS06925;product=two-component system response regulator GlrR;protein_id=WP_024131115.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	44130	44468	.	+	.	ID=gene-C9E94_RS06930;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=C9E94_RS06930;old_locus_tag=C9E94_07100
NZ_PYJR01000052.1	Protein Homology	CDS	44130	44468	.	+	0	ID=cds-WP_000717694.1;Parent=gene-C9E94_RS06930;Dbxref=GenBank:WP_000717694.1;Name=WP_000717694.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=C9E94_RS06930;product=nitrogen regulatory protein P-II;protein_id=WP_000717694.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	44517	45977	.	-	.	ID=gene-C9E94_RS06935;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=C9E94_RS06935;old_locus_tag=C9E94_07105
NZ_PYJR01000052.1	Protein Homology	CDS	44517	45977	.	-	0	ID=cds-WP_023209430.1;Parent=gene-C9E94_RS06935;Dbxref=GenBank:WP_023209430.1;Name=WP_023209430.1;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461495.1;locus_tag=C9E94_RS06935;product=dipeptide permease DtpD;protein_id=WP_023209430.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	46033	48177	.	-	.	ID=gene-C9E94_RS06940;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=C9E94_RS06940;old_locus_tag=C9E94_07110
NZ_PYJR01000052.1	Protein Homology	CDS	46033	48177	.	-	0	ID=cds-WP_001100652.1;Parent=gene-C9E94_RS06940;Dbxref=GenBank:WP_001100652.1;Name=WP_001100652.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461494.1;locus_tag=C9E94_RS06940;product=lysine decarboxylase CadA;protein_id=WP_001100652.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	48260	49591	.	-	.	ID=gene-C9E94_RS06945;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=C9E94_RS06945;old_locus_tag=C9E94_07115
NZ_PYJR01000052.1	Protein Homology	CDS	48260	49591	.	-	0	ID=cds-WP_000100008.1;Parent=gene-C9E94_RS06945;Dbxref=GenBank:WP_000100008.1;Name=WP_000100008.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461493.1;locus_tag=C9E94_RS06945;product=cadaverine/lysine antiporter;protein_id=WP_000100008.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	49952	51496	.	-	.	ID=gene-C9E94_RS06950;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=C9E94_RS06950;old_locus_tag=C9E94_07120
NZ_PYJR01000052.1	Protein Homology	CDS	49952	51496	.	-	0	ID=cds-WP_001187150.1;Parent=gene-C9E94_RS06950;Dbxref=GenBank:WP_001187150.1;Name=WP_001187150.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=cadC;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461492.1;locus_tag=C9E94_RS06950;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_001187150.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	51678	52868	.	-	.	ID=gene-C9E94_RS06955;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=C9E94_RS06955;old_locus_tag=C9E94_07125
NZ_PYJR01000052.1	Protein Homology	CDS	51678	52868	.	-	0	ID=cds-WP_000883146.1;Parent=gene-C9E94_RS06955;Dbxref=GenBank:WP_000883146.1;Name=WP_000883146.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461491.1;locus_tag=C9E94_RS06955;product=NO-inducible flavohemoprotein;protein_id=WP_000883146.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	53193	54446	.	+	.	ID=gene-C9E94_RS06960;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=C9E94_RS06960;old_locus_tag=C9E94_07130
NZ_PYJR01000052.1	Protein Homology	CDS	53193	54446	.	+	0	ID=cds-WP_000919178.1;Parent=gene-C9E94_RS06960;Dbxref=GenBank:WP_000919178.1;Name=WP_000919178.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=C9E94_RS06960;product=serine hydroxymethyltransferase;protein_id=WP_000919178.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	54642	55781	.	+	.	ID=gene-C9E94_RS06965;Name=C9E94_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06965;old_locus_tag=C9E94_07135
NZ_PYJR01000052.1	Protein Homology	CDS	54642	55781	.	+	0	ID=cds-WP_001173729.1;Parent=gene-C9E94_RS06965;Dbxref=GenBank:WP_001173729.1;Name=WP_001173729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461489.1;locus_tag=C9E94_RS06965;product=3-phenylpropionate MFS transporter;protein_id=WP_001173729.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	55776	57053	.	-	.	ID=gene-C9E94_RS06970;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=C9E94_RS06970;old_locus_tag=C9E94_07140
NZ_PYJR01000052.1	Protein Homology	CDS	55776	57053	.	-	0	ID=cds-WP_000982961.1;Parent=gene-C9E94_RS06970;Dbxref=GenBank:WP_000982961.1;Name=WP_000982961.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461488.1;locus_tag=C9E94_RS06970;product=stationary phase inducible protein CsiE;protein_id=WP_000982961.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	57179	57817	.	+	.	ID=gene-C9E94_RS06975;Name=C9E94_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06975;old_locus_tag=C9E94_07145
NZ_PYJR01000052.1	Protein Homology	CDS	57179	57817	.	+	0	ID=cds-WP_000805728.1;Parent=gene-C9E94_RS06975;Dbxref=GenBank:WP_000805728.1;Name=WP_000805728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461487.1;locus_tag=C9E94_RS06975;product=DUF1007 family protein;protein_id=WP_000805728.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	57808	58794	.	+	.	ID=gene-C9E94_RS06980;Name=C9E94_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06980;old_locus_tag=C9E94_07150
NZ_PYJR01000052.1	Protein Homology	CDS	57808	58794	.	+	0	ID=cds-WP_001581922.1;Parent=gene-C9E94_RS06980;Dbxref=GenBank:WP_001581922.1;Name=WP_001581922.1;Ontology_term=GO:0035444,GO:0015099,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=nickel cation transmembrane transport|0035444||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461486.1;locus_tag=C9E94_RS06980;product=nickel/cobalt transporter;protein_id=WP_001581922.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	58795	59808	.	-	.	ID=gene-C9E94_RS06985;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=protein_coding;locus_tag=C9E94_RS06985;old_locus_tag=C9E94_07155
NZ_PYJR01000052.1	Protein Homology	CDS	58795	59808	.	-	0	ID=cds-WP_000020685.1;Parent=gene-C9E94_RS06985;Dbxref=GenBank:WP_000020685.1;Name=WP_000020685.1;Ontology_term=GO:0006790,GO:0016002;gbkey=CDS;gene=asrC;go_function=sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461485.1;locus_tag=C9E94_RS06985;product=sulfite reductase subunit C;protein_id=WP_000020685.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	59820	60638	.	-	.	ID=gene-C9E94_RS06990;Name=asrB;gbkey=Gene;gene=asrB;gene_biotype=protein_coding;locus_tag=C9E94_RS06990;old_locus_tag=C9E94_07160
NZ_PYJR01000052.1	Protein Homology	CDS	59820	60638	.	-	0	ID=cds-WP_000017587.1;Parent=gene-C9E94_RS06990;Dbxref=GenBank:WP_000017587.1;Name=WP_000017587.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrB;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461484.1;locus_tag=C9E94_RS06990;product=anaerobic sulfite reductase subunit AsrB;protein_id=WP_000017587.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	60642	61685	.	-	.	ID=gene-C9E94_RS06995;Name=asrA;gbkey=Gene;gene=asrA;gene_biotype=protein_coding;locus_tag=C9E94_RS06995;old_locus_tag=C9E94_07165
NZ_PYJR01000052.1	Protein Homology	CDS	60642	61685	.	-	0	ID=cds-WP_000985209.1;Parent=gene-C9E94_RS06995;Dbxref=GenBank:WP_000985209.1;Name=WP_000985209.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrA;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461483.1;locus_tag=C9E94_RS06995;product=anaerobic sulfite reductase subunit AsrA;protein_id=WP_000985209.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	61867	62745	.	-	.	ID=gene-C9E94_RS07000;Name=C9E94_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07000;old_locus_tag=C9E94_07170
NZ_PYJR01000052.1	Protein Homology	CDS	61867	62745	.	-	0	ID=cds-WP_000174944.1;Parent=gene-C9E94_RS07000;Dbxref=GenBank:WP_000174944.1;Name=WP_000174944.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461482.1;locus_tag=C9E94_RS07000;product=alpha/beta hydrolase;protein_id=WP_000174944.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	62890	63693	.	-	.	ID=gene-C9E94_RS07005;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=C9E94_RS07005;old_locus_tag=C9E94_07175
NZ_PYJR01000052.1	Protein Homology	CDS	62890	63693	.	-	0	ID=cds-WP_000553473.1;Parent=gene-C9E94_RS07005;Dbxref=GenBank:WP_000553473.1;Name=WP_000553473.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=C9E94_RS07005;product=inositol-1-monophosphatase;protein_id=WP_000553473.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	63812	64543	.	+	.	ID=gene-C9E94_RS07010;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=C9E94_RS07010;old_locus_tag=C9E94_07180
NZ_PYJR01000052.1	Protein Homology	CDS	63812	64543	.	+	0	ID=cds-WP_000940032.1;Parent=gene-C9E94_RS07010;Dbxref=GenBank:WP_000940032.1;Name=WP_000940032.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461480.1;locus_tag=C9E94_RS07010;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_000940032.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	64703	65197	.	+	.	ID=gene-C9E94_RS07015;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=C9E94_RS07015;old_locus_tag=C9E94_07185
NZ_PYJR01000052.1	Protein Homology	CDS	64703	65197	.	+	0	ID=cds-WP_001241346.1;Parent=gene-C9E94_RS07015;Dbxref=GenBank:WP_001241346.1;Name=WP_001241346.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241352.1;locus_tag=C9E94_RS07015;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241346.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	65378	66592	.	+	.	ID=gene-C9E94_RS07020;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=C9E94_RS07020;old_locus_tag=C9E94_07190
NZ_PYJR01000052.1	Protein Homology	CDS	65378	66592	.	+	0	ID=cds-WP_000775263.1;Parent=gene-C9E94_RS07020;Dbxref=GenBank:WP_000775263.1;Name=WP_000775263.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=C9E94_RS07020;product=cysteine desulfurase;protein_id=WP_000775263.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	66620	67006	.	+	.	ID=gene-C9E94_RS07025;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=C9E94_RS07025;old_locus_tag=C9E94_07195
NZ_PYJR01000052.1	Protein Homology	CDS	66620	67006	.	+	0	ID=cds-WP_000331704.1;Parent=gene-C9E94_RS07025;Dbxref=GenBank:WP_000331704.1;Name=WP_000331704.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=C9E94_RS07025;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_000331704.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	67035	67358	.	+	.	ID=gene-C9E94_RS07030;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=C9E94_RS07030;old_locus_tag=C9E94_07200
NZ_PYJR01000052.1	Protein Homology	CDS	67035	67358	.	+	0	ID=cds-WP_000028952.1;Parent=gene-C9E94_RS07030;Dbxref=GenBank:WP_000028952.1;Name=WP_000028952.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461476.1;locus_tag=C9E94_RS07030;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_000028952.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	67554	68069	.	+	.	ID=gene-C9E94_RS07035;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=C9E94_RS07035;old_locus_tag=C9E94_07205
NZ_PYJR01000052.1	Protein Homology	CDS	67554	68069	.	+	0	ID=cds-WP_000384398.1;Parent=gene-C9E94_RS07035;Dbxref=GenBank:WP_000384398.1;Name=WP_000384398.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461475.1;locus_tag=C9E94_RS07035;product=co-chaperone HscB;protein_id=WP_000384398.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	68082	69932	.	+	.	ID=gene-C9E94_RS07040;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=C9E94_RS07040;old_locus_tag=C9E94_07210
NZ_PYJR01000052.1	Protein Homology	CDS	68082	69932	.	+	0	ID=cds-WP_001196669.1;Parent=gene-C9E94_RS07040;Dbxref=GenBank:WP_001196669.1;Name=WP_001196669.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=C9E94_RS07040;product=Fe-S protein assembly chaperone HscA;protein_id=WP_001196669.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	69934	70269	.	+	.	ID=gene-C9E94_RS07045;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=C9E94_RS07045;old_locus_tag=C9E94_07215
NZ_PYJR01000052.1	Protein Homology	CDS	69934	70269	.	+	0	ID=cds-WP_001124466.1;Parent=gene-C9E94_RS07045;Dbxref=GenBank:WP_001124466.1;Name=WP_001124466.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=C9E94_RS07045;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_001124466.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	70281	70481	.	+	.	ID=gene-C9E94_RS07050;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=C9E94_RS07050;old_locus_tag=C9E94_07220
NZ_PYJR01000052.1	Protein Homology	CDS	70281	70481	.	+	0	ID=cds-WP_000523621.1;Parent=gene-C9E94_RS07050;Dbxref=GenBank:WP_000523621.1;Name=WP_000523621.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=C9E94_RS07050;product=Fe-S cluster assembly protein IscX;protein_id=WP_000523621.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	70535	71818	.	+	.	ID=gene-C9E94_RS07055;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=C9E94_RS07055;old_locus_tag=C9E94_07225
NZ_PYJR01000052.1	Protein Homology	CDS	70535	71818	.	+	0	ID=cds-WP_000133536.1;Parent=gene-C9E94_RS07055;Dbxref=GenBank:WP_000133536.1;Name=WP_000133536.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461471.1;locus_tag=C9E94_RS07055;product=aminopeptidase PepB;protein_id=WP_000133536.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	71928	72704	.	+	.	ID=gene-C9E94_RS07060;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=C9E94_RS07060;old_locus_tag=C9E94_07235
NZ_PYJR01000052.1	Protein Homology	CDS	71928	72704	.	+	0	ID=cds-WP_001533245.1;Parent=gene-C9E94_RS07060;Dbxref=GenBank:WP_001533245.1;Name=WP_001533245.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311415.2;locus_tag=C9E94_RS07060;product=enhanced serine sensitivity protein SseB;protein_id=WP_001533245.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	72741	72857	.	-	.	ID=gene-C9E94_RS23780;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=C9E94_RS23780
NZ_PYJR01000052.1	Protein Homology	CDS	72741	72857	.	-	0	ID=cds-WP_350028759.1;Parent=gene-C9E94_RS23780;Dbxref=GenBank:WP_350028759.1;Name=WP_350028759.1;gbkey=CDS;gene=timP;inference=COORDINATES: protein motif:HMM:NF040796.1;locus_tag=C9E94_RS23780;product=small toxic inner membrane protein TimP;protein_id=WP_350028759.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	73273	73941	.	-	.	ID=gene-C9E94_RS07070;Name=C9E94_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07070;old_locus_tag=C9E94_07245
NZ_PYJR01000052.1	Protein Homology	CDS	73273	73941	.	-	0	ID=cds-WP_000355384.1;Parent=gene-C9E94_RS07070;Dbxref=GenBank:WP_000355384.1;Name=WP_000355384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461469.1;locus_tag=C9E94_RS07070;product=DUF5066 family protein;protein_id=WP_000355384.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	73983	74207	.	+	.	ID=gene-C9E94_RS07075;Name=C9E94_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07075;old_locus_tag=C9E94_07250
NZ_PYJR01000052.1	Protein Homology	CDS	73983	74207	.	+	0	ID=cds-WP_024150369.1;Parent=gene-C9E94_RS07075;Dbxref=GenBank:WP_024150369.1;Name=WP_024150369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344128.1;locus_tag=C9E94_RS07075;product=hypothetical protein;protein_id=WP_024150369.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	74187	75029	.	-	.	ID=gene-C9E94_RS07080;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=C9E94_RS07080;old_locus_tag=C9E94_07255
NZ_PYJR01000052.1	Protein Homology	CDS	74187	75029	.	-	0	ID=cds-WP_000205241.1;Parent=gene-C9E94_RS07080;Dbxref=GenBank:WP_000205241.1;Name=WP_000205241.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461468.1;locus_tag=C9E94_RS07080;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_000205241.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	75238	80172	.	+	.	ID=gene-C9E94_RS07085;Name=C9E94_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07085;old_locus_tag=C9E94_07260
NZ_PYJR01000052.1	Protein Homology	CDS	75238	80172	.	+	0	ID=cds-WP_135400895.1;Parent=gene-C9E94_RS07085;Dbxref=GenBank:WP_135400895.1;Name=WP_135400895.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461467.1;locus_tag=C9E94_RS07085;product=alpha-2-macroglobulin family protein;protein_id=WP_135400895.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	80173	82488	.	+	.	ID=gene-C9E94_RS07090;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=C9E94_RS07090;old_locus_tag=C9E94_07265
NZ_PYJR01000052.1	Protein Homology	CDS	80173	82488	.	+	0	ID=cds-WP_135400896.1;Parent=gene-C9E94_RS07090;Dbxref=GenBank:WP_135400896.1;Name=WP_135400896.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=C9E94_RS07090;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_135400896.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	82644	85022	.	+	.	ID=gene-C9E94_RS07095;Name=C9E94_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07095;old_locus_tag=C9E94_07270
NZ_PYJR01000052.1	Protein Homology	CDS	82644	85022	.	+	0	ID=cds-WP_369598037.1;Parent=gene-C9E94_RS07095;Dbxref=GenBank:WP_369598037.1;Name=WP_369598037.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664463.1;locus_tag=C9E94_RS07095;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_369598037.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	85019	85648	.	+	.	ID=gene-C9E94_RS07100;Name=C9E94_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07100;old_locus_tag=C9E94_07275
NZ_PYJR01000052.1	Protein Homology	CDS	85019	85648	.	+	0	ID=cds-WP_000077436.1;Parent=gene-C9E94_RS07100;Dbxref=GenBank:WP_000077436.1;Name=WP_000077436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461464.1;locus_tag=C9E94_RS07100;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_000077436.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	85641	86450	.	+	.	ID=gene-C9E94_RS07105;Name=C9E94_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07105;old_locus_tag=C9E94_07280
NZ_PYJR01000052.1	Protein Homology	CDS	85641	86450	.	+	0	ID=cds-WP_000544875.1;Parent=gene-C9E94_RS07105;Dbxref=GenBank:WP_000544875.1;Name=WP_000544875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461463.2;locus_tag=C9E94_RS07105;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000544875.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	86450	87313	.	+	.	ID=gene-C9E94_RS07110;Name=C9E94_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07110;old_locus_tag=C9E94_07285
NZ_PYJR01000052.1	Protein Homology	CDS	86450	87313	.	+	0	ID=cds-WP_023994422.1;Parent=gene-C9E94_RS07110;Dbxref=GenBank:WP_023994422.1;Name=WP_023994422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461462.1;locus_tag=C9E94_RS07110;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_023994422.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	87434	87865	.	+	.	ID=gene-C9E94_RS07115;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=C9E94_RS07115;old_locus_tag=C9E94_07290
NZ_PYJR01000052.1	Protein Homology	CDS	87434	87865	.	+	0	ID=cds-WP_000963846.1;Parent=gene-C9E94_RS07115;Dbxref=GenBank:WP_000963846.1;Name=WP_000963846.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=C9E94_RS07115;product=nucleoside-diphosphate kinase;protein_id=WP_000963846.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	88072	89238	.	+	.	ID=gene-C9E94_RS07120;Name=C9E94_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07120;old_locus_tag=C9E94_07295
NZ_PYJR01000052.1	Protein Homology	CDS	88072	89238	.	+	0	ID=cds-WP_000003206.1;Parent=gene-C9E94_RS07120;Dbxref=GenBank:WP_000003206.1;Name=WP_000003206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461460.1;locus_tag=C9E94_RS07120;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_000003206.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	89530	90534	.	+	.	ID=gene-C9E94_RS07125;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=C9E94_RS07125;old_locus_tag=C9E94_07305
NZ_PYJR01000052.1	Protein Homology	CDS	89530	90534	.	+	0	ID=cds-WP_023993597.1;Parent=gene-C9E94_RS07125;Dbxref=GenBank:WP_023993597.1;Name=WP_023993597.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461459.1;locus_tag=C9E94_RS07125;product=cytoskeleton protein RodZ;protein_id=WP_023993597.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	90561	91679	.	+	.	ID=gene-C9E94_RS07130;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=C9E94_RS07130;old_locus_tag=C9E94_07310
NZ_PYJR01000052.1	Protein Homology	CDS	90561	91679	.	+	0	ID=cds-WP_000551804.1;Parent=gene-C9E94_RS07130;Dbxref=GenBank:WP_000551804.1;Name=WP_000551804.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461458.1;locus_tag=C9E94_RS07130;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_000551804.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	91790	93064	.	+	.	ID=gene-C9E94_RS07135;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=C9E94_RS07135;old_locus_tag=C9E94_07315
NZ_PYJR01000052.1	Protein Homology	CDS	91790	93064	.	+	0	ID=cds-WP_001107139.1;Parent=gene-C9E94_RS07135;Dbxref=GenBank:WP_001107139.1;Name=WP_001107139.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461457.1;locus_tag=C9E94_RS07135;product=histidine--tRNA ligase;protein_id=WP_001107139.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	93078	93698	.	+	.	ID=gene-C9E94_RS07140;Name=C9E94_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07140;old_locus_tag=C9E94_07320
NZ_PYJR01000052.1	Protein Homology	CDS	93078	93698	.	+	0	ID=cds-WP_000409190.1;Parent=gene-C9E94_RS07140;Dbxref=GenBank:WP_000409190.1;Name=WP_000409190.1;Ontology_term=GO:0005515,GO:0044877;gbkey=CDS;go_function=protein binding|0005515||IEA,protein-containing complex binding|0044877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461456.1;locus_tag=C9E94_RS07140;product=YfgM family protein;protein_id=WP_000409190.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	93709	94887	.	+	.	ID=gene-C9E94_RS07145;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=C9E94_RS07145;old_locus_tag=C9E94_07325
NZ_PYJR01000052.1	Protein Homology	CDS	93709	94887	.	+	0	ID=cds-WP_001177072.1;Parent=gene-C9E94_RS07145;Dbxref=GenBank:WP_001177072.1;Name=WP_001177072.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461455.1;locus_tag=C9E94_RS07145;product=outer membrane protein assembly factor BamB;protein_id=WP_001177072.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	95004	96476	.	+	.	ID=gene-C9E94_RS07150;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=C9E94_RS07150;old_locus_tag=C9E94_07330
NZ_PYJR01000052.1	Protein Homology	CDS	95004	96476	.	+	0	ID=cds-WP_000249411.1;Parent=gene-C9E94_RS07150;Dbxref=GenBank:WP_000249411.1;Name=WP_000249411.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=C9E94_RS07150;product=ribosome biogenesis GTPase Der;protein_id=WP_000249411.1;transl_table=11
NZ_PYJR01000052.1	RefSeq	gene	96565	96786	.	+	.	ID=gene-C9E94_RS07155;Name=C9E94_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07155;old_locus_tag=C9E94_07335
NZ_PYJR01000052.1	Protein Homology	CDS	96565	96786	.	+	0	ID=cds-WP_079950079.1;Parent=gene-C9E94_RS07155;Dbxref=GenBank:WP_079950079.1;Name=WP_079950079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461453.1;locus_tag=C9E94_RS07155;product=zinc ribbon domain-containing protein;protein_id=WP_079950079.1;transl_table=11
##sequence-region NZ_PYJR01000123.1 1 1794
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000123.1	RefSeq	region	1	1794	.	+	.	ID=NZ_PYJR01000123.1:1..1794;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000123.1	RefSeq	gene	204	1745	.	+	.	ID=gene-C9E94_RS18140;Name=C9E94_RS18140;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9E94_RS18140;old_locus_tag=C9E94_18575
NZ_PYJR01000123.1	cmsearch	rRNA	204	1745	.	+	.	ID=rna-C9E94_RS18140;Parent=gene-C9E94_RS18140;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS18140;product=16S ribosomal RNA
NZ_PYJR01000123.1	cmsearch	exon	204	1745	.	+	.	ID=exon-C9E94_RS18140-1;Parent=rna-C9E94_RS18140;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS18140;product=16S ribosomal RNA
##sequence-region NZ_PYJR01000004.1 1 1737
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000004.1	RefSeq	region	1	1737	.	+	.	ID=NZ_PYJR01000004.1:1..1737;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000004.1	RefSeq	gene	13	1737	.	-	.	ID=gene-C9E94_RS00110;Name=C9E94_RS00110;end_range=1737,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9E94_RS00110;old_locus_tag=C9E94_00110;partial=true
NZ_PYJR01000004.1	cmsearch	rRNA	13	1737	.	-	.	ID=rna-C9E94_RS00110;Parent=gene-C9E94_RS00110;Dbxref=RFAM:RF02541;end_range=1737,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS00110;partial=true;product=23S ribosomal RNA
NZ_PYJR01000004.1	cmsearch	exon	13	1737	.	-	.	ID=exon-C9E94_RS00110-1;Parent=rna-C9E94_RS00110;Dbxref=RFAM:RF02541;end_range=1737,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS00110;partial=true;product=23S ribosomal RNA
##sequence-region NZ_PYJR01000067.1 1 1443
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000067.1	RefSeq	region	1	1443	.	+	.	ID=NZ_PYJR01000067.1:1..1443;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000067.1	RefSeq	gene	1	526	.	-	.	ID=gene-C9E94_RS09045;Name=C9E94_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09045;old_locus_tag=C9E94_09250;partial=true;start_range=.,1
NZ_PYJR01000067.1	Protein Homology	CDS	1	526	.	-	0	ID=cds-WP_255123262.1;Parent=gene-C9E94_RS09045;Dbxref=GenBank:WP_255123262.1;Name=WP_255123262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000472517.1;locus_tag=C9E94_RS09045;partial=true;product=haloacid dehalogenase-like hydrolase;protein_id=WP_255123262.1;start_range=.,1;transl_table=11
NZ_PYJR01000067.1	RefSeq	gene	586	1443	.	-	.	ID=gene-C9E94_RS09050;Name=C9E94_RS09050;end_range=1443,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09050;old_locus_tag=C9E94_09255;partial=true
NZ_PYJR01000067.1	Protein Homology	CDS	586	1443	.	-	0	ID=cds-WP_135400951.1;Parent=gene-C9E94_RS09050;Dbxref=GenBank:WP_135400951.1;Name=WP_135400951.1;Ontology_term=GO:0016757;end_range=1443,.;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200009.1;locus_tag=C9E94_RS09050;partial=true;product=glycosyltransferase family 2 protein;protein_id=WP_135400951.1;transl_table=11
##sequence-region NZ_PYJR01000068.1 1 1399
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000068.1	RefSeq	region	1	1399	.	+	.	ID=NZ_PYJR01000068.1:1..1399;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000068.1	RefSeq	gene	581	1399	.	+	.	ID=gene-C9E94_RS09055;Name=C9E94_RS09055;end_range=1399,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09055;old_locus_tag=C9E94_09265;partial=true
NZ_PYJR01000068.1	Protein Homology	CDS	581	1399	.	+	0	ID=cds-WP_135400952.1;Parent=gene-C9E94_RS09055;Dbxref=GenBank:WP_135400952.1;Name=WP_135400952.1;end_range=1399,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000332896.1;locus_tag=C9E94_RS09055;partial=true;product=glycosyltransferase;protein_id=WP_135400952.1;transl_table=11
##sequence-region NZ_PYJR01000090.1 1 1332
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000090.1	RefSeq	region	1	1332	.	+	.	ID=NZ_PYJR01000090.1:1..1332;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000090.1	RefSeq	gene	41	1332	.	+	.	ID=gene-C9E94_RS12015;Name=C9E94_RS12015;end_range=1332,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12015;old_locus_tag=C9E94_12285;partial=true
NZ_PYJR01000090.1	Protein Homology	CDS	41	1332	.	+	0	ID=cds-WP_135401044.1;Parent=gene-C9E94_RS12015;Dbxref=GenBank:WP_135401044.1;Name=WP_135401044.1;Ontology_term=GO:0008755,GO:0016020;end_range=1332,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=O antigen polymerase activity|0008755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000397237.1;locus_tag=C9E94_RS12015;partial=true;product=O-antigen polymerase;protein_id=WP_135401044.1;transl_table=11
##sequence-region NZ_PYJR01000132.1 1 1205
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000132.1	RefSeq	region	1	1205	.	+	.	ID=NZ_PYJR01000132.1:1..1205;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000132.1	RefSeq	gene	43	1205	.	+	.	ID=gene-C9E94_RS19540;Name=C9E94_RS19540;end_range=1205,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19540;old_locus_tag=C9E94_20035;partial=true
NZ_PYJR01000132.1	Protein Homology	CDS	43	1205	.	+	0	ID=cds-WP_135401189.1;Parent=gene-C9E94_RS19540;Dbxref=GenBank:WP_135401189.1;Name=WP_135401189.1;end_range=1205,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=C9E94_RS19540;partial=true;product=oxaloacetate decarboxylase subunit beta;protein_id=WP_135401189.1;transl_table=11
##sequence-region NZ_PYJR01000122.1 1 1070
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000122.1	RefSeq	region	1	1070	.	+	.	ID=NZ_PYJR01000122.1:1..1070;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000122.1	RefSeq	gene	233	595	.	+	.	ID=gene-C9E94_RS18130;Name=C9E94_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18130;old_locus_tag=C9E94_18565
NZ_PYJR01000122.1	Protein Homology	CDS	233	595	.	+	0	ID=cds-WP_135401162.1;Parent=gene-C9E94_RS18130;Dbxref=GenBank:WP_135401162.1;Name=WP_135401162.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459552.1;locus_tag=C9E94_RS18130;product=GtrA family protein;protein_id=WP_135401162.1;transl_table=11
NZ_PYJR01000122.1	RefSeq	gene	592	1070	.	+	.	ID=gene-C9E94_RS18135;Name=C9E94_RS18135;end_range=1070,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18135;old_locus_tag=C9E94_18570;partial=true
NZ_PYJR01000122.1	Protein Homology	CDS	592	1070	.	+	0	ID=cds-WP_073850703.1;Parent=gene-C9E94_RS18135;Dbxref=GenBank:WP_073850703.1;Name=WP_073850703.1;Ontology_term=GO:0016757;end_range=1070,.;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459551.1;locus_tag=C9E94_RS18135;partial=true;product=glycosyltransferase family 2 protein;protein_id=WP_073850703.1;transl_table=11
##sequence-region NZ_PYJR01000026.1 1 968
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000026.1	RefSeq	region	1	968	.	+	.	ID=NZ_PYJR01000026.1:1..968;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000026.1	RefSeq	gene	1	968	.	-	.	ID=gene-C9E94_RS02410;Name=tuf;end_range=968,.;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=C9E94_RS02410;old_locus_tag=C9E94_02480;partial=true;start_range=.,1
NZ_PYJR01000026.1	Protein Homology	CDS	1	968	.	-	0	ID=cds-WP_001672510.1;Parent=gene-C9E94_RS02410;Dbxref=GenBank:WP_001672510.1;Name=WP_001672510.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;end_range=968,.;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=C9E94_RS02410;partial=true;product=elongation factor Tu;protein_id=WP_001672510.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYJR01000125.1 1 930
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000125.1	RefSeq	region	1	930	.	+	.	ID=NZ_PYJR01000125.1:1..930;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000125.1	RefSeq	gene	1	930	.	+	.	ID=gene-C9E94_RS18195;Name=C9E94_RS18195;end_range=930,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18195;old_locus_tag=C9E94_18635;partial=true;start_range=.,1
NZ_PYJR01000125.1	GeneMarkS-2+	CDS	1	930	.	+	1	ID=cds-WP_135401163.1;Parent=gene-C9E94_RS18195;Dbxref=GenBank:WP_135401163.1;Name=WP_135401163.1;end_range=930,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS18195;partial=true;product=O-antigen translocase;protein_id=WP_135401163.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYJR01000047.1 1 827
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000047.1	RefSeq	region	1	827	.	+	.	ID=NZ_PYJR01000047.1:1..827;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000047.1	RefSeq	pseudogene	1	827	.	+	.	ID=gene-C9E94_RS06115;Name=C9E94_RS06115;end_range=827,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS06115;old_locus_tag=C9E94_06275;partial=true;pseudo=true;start_range=.,1
NZ_PYJR01000047.1	Protein Homology	CDS	1	827	.	+	0	ID=cds-C9E94_RS06115;Parent=gene-C9E94_RS06115;Note=catalyzes the formation of pyruvate from oxaloacetate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=827,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9E94_RS06115;partial=true;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYJR01000049.1 1 96698
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000049.1	RefSeq	region	1	96698	.	+	.	ID=NZ_PYJR01000049.1:1..96698;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000049.1	RefSeq	gene	190	564	.	-	.	ID=gene-C9E94_RS06155;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=C9E94_RS06155;old_locus_tag=C9E94_06315
NZ_PYJR01000049.1	cmsearch	RNase_P_RNA	190	564	.	-	.	ID=rna-C9E94_RS06155;Parent=gene-C9E94_RS06155;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS06155;product=RNase P RNA component class A
NZ_PYJR01000049.1	cmsearch	exon	190	564	.	-	.	ID=exon-C9E94_RS06155-1;Parent=rna-C9E94_RS06155;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS06155;product=RNase P RNA component class A
NZ_PYJR01000049.1	RefSeq	gene	597	1742	.	-	.	ID=gene-C9E94_RS06160;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=C9E94_RS06160;old_locus_tag=C9E94_06320
NZ_PYJR01000049.1	Protein Homology	CDS	597	1742	.	-	0	ID=cds-WP_000706465.1;Parent=gene-C9E94_RS06160;Dbxref=GenBank:WP_000706465.1;Name=WP_000706465.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462160.1;locus_tag=C9E94_RS06160;product=glycerate 2-kinase;protein_id=WP_000706465.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	1840	2730	.	-	.	ID=gene-C9E94_RS06165;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=C9E94_RS06165;old_locus_tag=C9E94_06325
NZ_PYJR01000049.1	Protein Homology	CDS	1840	2730	.	-	0	ID=cds-WP_000178106.1;Parent=gene-C9E94_RS06165;Dbxref=GenBank:WP_000178106.1;Name=WP_000178106.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=C9E94_RS06165;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000178106.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	2756	3526	.	-	.	ID=gene-C9E94_RS06170;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=C9E94_RS06170;old_locus_tag=C9E94_06330
NZ_PYJR01000049.1	Protein Homology	CDS	2756	3526	.	-	0	ID=cds-WP_001057715.1;Parent=gene-C9E94_RS06170;Dbxref=GenBank:WP_001057715.1;Name=WP_001057715.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462162.1;locus_tag=C9E94_RS06170;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_001057715.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	4056	5627	.	+	.	ID=gene-C9E94_RS06175;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=C9E94_RS06175;old_locus_tag=C9E94_06335
NZ_PYJR01000049.1	Protein Homology	CDS	4056	5627	.	+	0	ID=cds-WP_001273722.1;Parent=gene-C9E94_RS06175;Dbxref=GenBank:WP_001273722.1;Name=WP_001273722.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462163.1;locus_tag=C9E94_RS06175;product=galactarate dehydratase;protein_id=WP_001273722.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	5885	6739	.	+	.	ID=gene-C9E94_RS06180;Name=C9E94_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06180;old_locus_tag=C9E94_06340
NZ_PYJR01000049.1	Protein Homology	CDS	5885	6739	.	+	0	ID=cds-WP_000469979.1;Parent=gene-C9E94_RS06180;Dbxref=GenBank:WP_000469979.1;Name=WP_000469979.1;Ontology_term=GO:0005975,GO:0008270,GO:0009025;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462166.1;locus_tag=C9E94_RS06180;product=tagatose bisphosphate family class II aldolase;protein_id=WP_000469979.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	6859	8130	.	+	.	ID=gene-C9E94_RS06185;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=C9E94_RS06185;old_locus_tag=C9E94_06345
NZ_PYJR01000049.1	Protein Homology	CDS	6859	8130	.	+	0	ID=cds-WP_000658736.1;Parent=gene-C9E94_RS06185;Dbxref=GenBank:WP_000658736.1;Name=WP_000658736.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462170.1;locus_tag=C9E94_RS06185;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WP_000658736.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	8145	8609	.	+	.	ID=gene-C9E94_RS06190;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=C9E94_RS06190;old_locus_tag=C9E94_06350
NZ_PYJR01000049.1	Protein Homology	CDS	8145	8609	.	+	0	ID=cds-WP_000080445.1;Parent=gene-C9E94_RS06190;Dbxref=GenBank:WP_000080445.1;Name=WP_000080445.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462171.1;locus_tag=C9E94_RS06190;product=PTS galactitol transporter subunit IIA;protein_id=WP_000080445.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	8640	8924	.	+	.	ID=gene-C9E94_RS06195;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=C9E94_RS06195;old_locus_tag=C9E94_06355
NZ_PYJR01000049.1	Protein Homology	CDS	8640	8924	.	+	0	ID=cds-WP_000824293.1;Parent=gene-C9E94_RS06195;Dbxref=GenBank:WP_000824293.1;Name=WP_000824293.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462172.1;locus_tag=C9E94_RS06195;product=PTS galactitol transporter subunit IIB;protein_id=WP_000824293.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	8928	10301	.	+	.	ID=gene-C9E94_RS06200;Name=C9E94_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06200;old_locus_tag=C9E94_06360
NZ_PYJR01000049.1	Protein Homology	CDS	8928	10301	.	+	0	ID=cds-WP_000490601.1;Parent=gene-C9E94_RS06200;Dbxref=GenBank:WP_000490601.1;Name=WP_000490601.1;Ontology_term=GO:0009401,GO:0015796,GO:0015577,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=galactitol transmembrane transporter activity|0015577||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,galactitol transmembrane transport|0015796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462173.1;locus_tag=C9E94_RS06200;product=galactitol-specific PTS transporter subunit IIC;protein_id=WP_000490601.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	10345	11388	.	+	.	ID=gene-C9E94_RS06205;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=C9E94_RS06205;old_locus_tag=C9E94_06365
NZ_PYJR01000049.1	Protein Homology	CDS	10345	11388	.	+	0	ID=cds-WP_000844165.1;Parent=gene-C9E94_RS06205;Dbxref=GenBank:WP_000844165.1;Name=WP_000844165.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462174.1;locus_tag=C9E94_RS06205;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_000844165.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	11499	12272	.	+	.	ID=gene-C9E94_RS06210;Name=C9E94_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06210;old_locus_tag=C9E94_06370
NZ_PYJR01000049.1	Protein Homology	CDS	11499	12272	.	+	0	ID=cds-WP_001083899.1;Parent=gene-C9E94_RS06210;Dbxref=GenBank:WP_001083899.1;Name=WP_001083899.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462175.1;locus_tag=C9E94_RS06210;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001083899.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	12430	13293	.	-	.	ID=gene-C9E94_RS06215;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=C9E94_RS06215;old_locus_tag=C9E94_06375
NZ_PYJR01000049.1	Protein Homology	CDS	12430	13293	.	-	0	ID=cds-WP_000812295.1;Parent=gene-C9E94_RS06215;Dbxref=GenBank:WP_000812295.1;Name=WP_000812295.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462176.1;locus_tag=C9E94_RS06215;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_000812295.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	13357	15399	.	+	.	ID=gene-C9E94_RS06220;Name=C9E94_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06220;old_locus_tag=C9E94_06380
NZ_PYJR01000049.1	Protein Homology	CDS	13357	15399	.	+	0	ID=cds-WP_000249227.1;Parent=gene-C9E94_RS06220;Dbxref=GenBank:WP_000249227.1;Name=WP_000249227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=C9E94_RS06220;product=penicillin-binding protein activator;protein_id=WP_000249227.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	15357	15752	.	+	.	ID=gene-C9E94_RS06225;Name=C9E94_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06225;old_locus_tag=C9E94_06385
NZ_PYJR01000049.1	Protein Homology	CDS	15357	15752	.	+	0	ID=cds-WP_000057285.1;Parent=gene-C9E94_RS06225;Dbxref=GenBank:WP_000057285.1;Name=WP_000057285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462178.1;locus_tag=C9E94_RS06225;product=YraN family protein;protein_id=WP_000057285.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	15774	16364	.	+	.	ID=gene-C9E94_RS06230;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=C9E94_RS06230;old_locus_tag=C9E94_06390
NZ_PYJR01000049.1	Protein Homology	CDS	15774	16364	.	+	0	ID=cds-WP_000893481.1;Parent=gene-C9E94_RS06230;Dbxref=GenBank:WP_000893481.1;Name=WP_000893481.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462179.1;locus_tag=C9E94_RS06230;product=DnaA initiator-associating protein DiaA;protein_id=WP_000893481.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	16374	16949	.	+	.	ID=gene-C9E94_RS06235;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=C9E94_RS06235;old_locus_tag=C9E94_06395
NZ_PYJR01000049.1	Protein Homology	CDS	16374	16949	.	+	0	ID=cds-WP_000643280.1;Parent=gene-C9E94_RS06235;Dbxref=GenBank:WP_000643280.1;Name=WP_000643280.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462180.1;locus_tag=C9E94_RS06235;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_000643280.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	17016	17651	.	-	.	ID=gene-C9E94_RS06240;Name=C9E94_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06240;old_locus_tag=C9E94_06400
NZ_PYJR01000049.1	Protein Homology	CDS	17016	17651	.	-	0	ID=cds-WP_001517952.1;Parent=gene-C9E94_RS06240;Dbxref=GenBank:WP_001517952.1;Name=WP_001517952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084527.1;locus_tag=C9E94_RS06240;product=NAD(P)H-binding protein;protein_id=WP_001517952.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	17782	18300	.	+	.	ID=gene-C9E94_RS06245;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=C9E94_RS06245;old_locus_tag=C9E94_06405
NZ_PYJR01000049.1	Protein Homology	CDS	17782	18300	.	+	0	ID=cds-WP_000037599.1;Parent=gene-C9E94_RS06245;Dbxref=GenBank:WP_000037599.1;Name=WP_000037599.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462182.1;locus_tag=C9E94_RS06245;product=protein/nucleic acid deglycase;protein_id=WP_000037599.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	18280	18723	.	-	.	ID=gene-C9E94_RS06250;Name=C9E94_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06250;old_locus_tag=C9E94_06410
NZ_PYJR01000049.1	Protein Homology	CDS	18280	18723	.	-	0	ID=cds-WP_000380404.1;Parent=gene-C9E94_RS06250;Dbxref=GenBank:WP_000380404.1;Name=WP_000380404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462183.1;locus_tag=C9E94_RS06250;product=YhbP family protein;protein_id=WP_000380404.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	18761	19078	.	+	.	ID=gene-C9E94_RS06255;Name=C9E94_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06255;old_locus_tag=C9E94_06415
NZ_PYJR01000049.1	Protein Homology	CDS	18761	19078	.	+	0	ID=cds-WP_000928379.1;Parent=gene-C9E94_RS06255;Dbxref=GenBank:WP_000928379.1;Name=WP_000928379.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462184.3;locus_tag=C9E94_RS06255;product=GIY-YIG nuclease family protein;protein_id=WP_000928379.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	19065	19568	.	-	.	ID=gene-C9E94_RS06260;Name=C9E94_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06260;old_locus_tag=C9E94_06420
NZ_PYJR01000049.1	Protein Homology	CDS	19065	19568	.	-	0	ID=cds-WP_000908562.1;Parent=gene-C9E94_RS06260;Dbxref=GenBank:WP_000908562.1;Name=WP_000908562.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462185.1;locus_tag=C9E94_RS06260;product=GNAT family N-acetyltransferase;protein_id=WP_000908562.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	19562	20086	.	-	.	ID=gene-C9E94_RS06265;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=C9E94_RS06265;old_locus_tag=C9E94_06425
NZ_PYJR01000049.1	Protein Homology	CDS	19562	20086	.	-	0	ID=cds-WP_000884721.1;Parent=gene-C9E94_RS06265;Dbxref=GenBank:WP_000884721.1;Name=WP_000884721.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462186.1;locus_tag=C9E94_RS06265;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_000884721.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	20303	21298	.	+	.	ID=gene-C9E94_RS06270;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=C9E94_RS06270;old_locus_tag=C9E94_06430
NZ_PYJR01000049.1	Protein Homology	CDS	20303	21298	.	+	0	ID=cds-WP_000421309.1;Parent=gene-C9E94_RS06270;Dbxref=GenBank:WP_000421309.1;Name=WP_000421309.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=C9E94_RS06270;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_000421309.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	21307	22185	.	+	.	ID=gene-C9E94_RS06275;Name=C9E94_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06275;old_locus_tag=C9E94_06435
NZ_PYJR01000049.1	Protein Homology	CDS	21307	22185	.	+	0	ID=cds-WP_000877715.1;Parent=gene-C9E94_RS06275;Dbxref=GenBank:WP_000877715.1;Name=WP_000877715.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312067.2;locus_tag=C9E94_RS06275;product=U32 family peptidase;protein_id=WP_000877715.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	22363	23370	.	+	.	ID=gene-C9E94_RS06280;Name=C9E94_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06280;old_locus_tag=C9E94_06440
NZ_PYJR01000049.1	Protein Homology	CDS	22363	23370	.	+	0	ID=cds-WP_000130422.1;Parent=gene-C9E94_RS06280;Dbxref=GenBank:WP_000130422.1;Name=WP_000130422.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462189.1;locus_tag=C9E94_RS06280;product=luciferase-like monooxygenase;protein_id=WP_000130422.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	23461	24705	.	-	.	ID=gene-C9E94_RS06285;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=C9E94_RS06285;old_locus_tag=C9E94_06445
NZ_PYJR01000049.1	Protein Homology	CDS	23461	24705	.	-	0	ID=cds-WP_000224393.1;Parent=gene-C9E94_RS06285;Dbxref=GenBank:WP_000224393.1;Name=WP_000224393.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462192.1;locus_tag=C9E94_RS06285;product=tryptophan permease;protein_id=WP_000224393.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	24859	26748	.	-	.	ID=gene-C9E94_RS06290;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=C9E94_RS06290;old_locus_tag=C9E94_06450
NZ_PYJR01000049.1	Protein Homology	CDS	24859	26748	.	-	0	ID=cds-WP_000807248.1;Parent=gene-C9E94_RS06290;Dbxref=GenBank:WP_000807248.1;Name=WP_000807248.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312070.2;locus_tag=C9E94_RS06290;product=ATP-dependent RNA helicase DeaD;protein_id=WP_000807248.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	26741	26821	.	-	.	ID=gene-C9E94_RS06295;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=C9E94_RS06295
NZ_PYJR01000049.1	Protein Homology	CDS	26741	26821	.	-	0	ID=cds-WP_010723222.1;Parent=gene-C9E94_RS06295;Dbxref=GenBank:WP_010723222.1;Name=WP_010723222.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=C9E94_RS06295;product=protein YrbN;protein_id=WP_010723222.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	26927	27811	.	-	.	ID=gene-C9E94_RS06300;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=C9E94_RS06300;old_locus_tag=C9E94_06455
NZ_PYJR01000049.1	Protein Homology	CDS	26927	27811	.	-	0	ID=cds-WP_000802069.1;Parent=gene-C9E94_RS06300;Dbxref=GenBank:WP_000802069.1;Name=WP_000802069.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=C9E94_RS06300;product=lipoprotein NlpI;protein_id=WP_000802069.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	27921	30056	.	-	.	ID=gene-C9E94_RS06305;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=C9E94_RS06305;old_locus_tag=C9E94_06460
NZ_PYJR01000049.1	Protein Homology	CDS	27921	30056	.	-	0	ID=cds-WP_001670767.1;Parent=gene-C9E94_RS06305;Dbxref=GenBank:WP_001670767.1;Name=WP_001670767.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462195.1;locus_tag=C9E94_RS06305;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_001670767.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	30298	30567	.	-	.	ID=gene-C9E94_RS06310;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=C9E94_RS06310;old_locus_tag=C9E94_06465
NZ_PYJR01000049.1	Protein Homology	CDS	30298	30567	.	-	0	ID=cds-WP_000059465.1;Parent=gene-C9E94_RS06310;Dbxref=GenBank:WP_000059465.1;Name=WP_000059465.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=C9E94_RS06310;product=30S ribosomal protein S15;protein_id=WP_000059465.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	30718	31662	.	-	.	ID=gene-C9E94_RS06315;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=C9E94_RS06315;old_locus_tag=C9E94_06470
NZ_PYJR01000049.1	Protein Homology	CDS	30718	31662	.	-	0	ID=cds-WP_000089668.1;Parent=gene-C9E94_RS06315;Dbxref=GenBank:WP_000089668.1;Name=WP_000089668.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462197.1;locus_tag=C9E94_RS06315;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_000089668.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	31662	32063	.	-	.	ID=gene-C9E94_RS06320;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=C9E94_RS06320;old_locus_tag=C9E94_06475
NZ_PYJR01000049.1	Protein Homology	CDS	31662	32063	.	-	0	ID=cds-WP_001040200.1;Parent=gene-C9E94_RS06320;Dbxref=GenBank:WP_001040200.1;Name=WP_001040200.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=C9E94_RS06320;product=30S ribosome-binding factor RbfA;protein_id=WP_001040200.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	32284	34962	.	-	.	ID=gene-C9E94_RS06325;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=C9E94_RS06325;old_locus_tag=C9E94_06480
NZ_PYJR01000049.1	Protein Homology	CDS	32284	34962	.	-	0	ID=cds-WP_000133064.1;Parent=gene-C9E94_RS06325;Dbxref=GenBank:WP_000133064.1;Name=WP_000133064.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462199.1;locus_tag=C9E94_RS06325;product=translation initiation factor IF-2;protein_id=WP_000133064.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	34987	36489	.	-	.	ID=gene-C9E94_RS06330;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=C9E94_RS06330;old_locus_tag=C9E94_06485
NZ_PYJR01000049.1	Protein Homology	CDS	34987	36489	.	-	0	ID=cds-WP_001031038.1;Parent=gene-C9E94_RS06330;Dbxref=GenBank:WP_001031038.1;Name=WP_001031038.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=C9E94_RS06330;product=transcription termination factor NusA;protein_id=WP_001031038.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	36517	36969	.	-	.	ID=gene-C9E94_RS06335;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=C9E94_RS06335;old_locus_tag=C9E94_06490
NZ_PYJR01000049.1	Protein Homology	CDS	36517	36969	.	-	0	ID=cds-WP_000105461.1;Parent=gene-C9E94_RS06335;Dbxref=GenBank:WP_000105461.1;Name=WP_000105461.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=C9E94_RS06335;product=ribosome maturation factor RimP;protein_id=WP_000105461.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	37177	37253	.	-	.	ID=gene-C9E94_RS06340;Name=C9E94_RS06340;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS06340;old_locus_tag=C9E94_06495
NZ_PYJR01000049.1	tRNAscan-SE	tRNA	37177	37253	.	-	.	ID=rna-C9E94_RS06340;Parent=gene-C9E94_RS06340;anticodon=(pos:complement(37217..37219));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS06340;product=tRNA-Met
NZ_PYJR01000049.1	tRNAscan-SE	exon	37177	37253	.	-	.	ID=exon-C9E94_RS06340-1;Parent=rna-C9E94_RS06340;anticodon=(pos:complement(37217..37219));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS06340;product=tRNA-Met
NZ_PYJR01000049.1	RefSeq	gene	37597	38940	.	+	.	ID=gene-C9E94_RS06345;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=C9E94_RS06345;old_locus_tag=C9E94_06500
NZ_PYJR01000049.1	Protein Homology	CDS	37597	38940	.	+	0	ID=cds-WP_000207657.1;Parent=gene-C9E94_RS06345;Dbxref=GenBank:WP_000207657.1;Name=WP_000207657.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=C9E94_RS06345;product=argininosuccinate synthase;protein_id=WP_000207657.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	39026	40090	.	-	.	ID=gene-C9E94_RS06350;Name=C9E94_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06350;old_locus_tag=C9E94_06505
NZ_PYJR01000049.1	Protein Homology	CDS	39026	40090	.	-	0	ID=cds-WP_000051504.1;Parent=gene-C9E94_RS06350;Dbxref=GenBank:WP_000051504.1;Name=WP_000051504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462203.1;locus_tag=C9E94_RS06350;product=DUF1963 domain-containing protein;protein_id=WP_000051504.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	40426	40512	.	-	.	ID=gene-C9E94_RS06355;Name=C9E94_RS06355;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS06355;old_locus_tag=C9E94_06510
NZ_PYJR01000049.1	tRNAscan-SE	tRNA	40426	40512	.	-	.	ID=rna-C9E94_RS06355;Parent=gene-C9E94_RS06355;anticodon=(pos:complement(40476..40478));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS06355;product=tRNA-Leu
NZ_PYJR01000049.1	tRNAscan-SE	exon	40426	40512	.	-	.	ID=exon-C9E94_RS06355-1;Parent=rna-C9E94_RS06355;anticodon=(pos:complement(40476..40478));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS06355;product=tRNA-Leu
NZ_PYJR01000049.1	RefSeq	gene	40526	40858	.	-	.	ID=gene-C9E94_RS06360;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=C9E94_RS06360;old_locus_tag=C9E94_06515
NZ_PYJR01000049.1	Protein Homology	CDS	40526	40858	.	-	0	ID=cds-WP_000272680.1;Parent=gene-C9E94_RS06360;Dbxref=GenBank:WP_000272680.1;Name=WP_000272680.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462204.1;locus_tag=C9E94_RS06360;product=preprotein translocase subunit SecG;protein_id=WP_000272680.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	41081	42418	.	-	.	ID=gene-C9E94_RS06365;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=C9E94_RS06365;old_locus_tag=C9E94_06520
NZ_PYJR01000049.1	Protein Homology	CDS	41081	42418	.	-	0	ID=cds-WP_000071169.1;Parent=gene-C9E94_RS06365;Dbxref=GenBank:WP_000071169.1;Name=WP_000071169.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462205.1;locus_tag=C9E94_RS06365;product=phosphoglucosamine mutase;protein_id=WP_000071169.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	42411	43259	.	-	.	ID=gene-C9E94_RS06370;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=C9E94_RS06370;old_locus_tag=C9E94_06525
NZ_PYJR01000049.1	Protein Homology	CDS	42411	43259	.	-	0	ID=cds-WP_135400883.1;Parent=gene-C9E94_RS06370;Dbxref=GenBank:WP_135400883.1;Name=WP_135400883.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462206.1;locus_tag=C9E94_RS06370;product=dihydropteroate synthase;protein_id=WP_135400883.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	43364	45298	.	-	.	ID=gene-C9E94_RS06375;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=C9E94_RS06375;old_locus_tag=C9E94_06530
NZ_PYJR01000049.1	Protein Homology	CDS	43364	45298	.	-	0	ID=cds-WP_001107481.1;Parent=gene-C9E94_RS06375;Dbxref=GenBank:WP_001107481.1;Name=WP_001107481.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=C9E94_RS06375;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001107481.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	45402	46028	.	-	.	ID=gene-C9E94_RS06380;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=C9E94_RS06380;old_locus_tag=C9E94_06540
NZ_PYJR01000049.1	Protein Homology	CDS	45402	46028	.	-	0	ID=cds-WP_135400884.1;Parent=gene-C9E94_RS06380;Dbxref=GenBank:WP_135400884.1;Name=WP_135400884.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462208.1;locus_tag=C9E94_RS06380;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_135400884.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	46155	46448	.	+	.	ID=gene-C9E94_RS06385;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=C9E94_RS06385;old_locus_tag=C9E94_06545
NZ_PYJR01000049.1	Protein Homology	CDS	46155	46448	.	+	0	ID=cds-WP_001592995.1;Parent=gene-C9E94_RS06385;Dbxref=GenBank:WP_001592995.1;Name=WP_001592995.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=C9E94_RS06385;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001592995.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	46604	47080	.	-	.	ID=gene-C9E94_RS06390;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=C9E94_RS06390;old_locus_tag=C9E94_06550
NZ_PYJR01000049.1	Protein Homology	CDS	46604	47080	.	-	0	ID=cds-WP_001148008.1;Parent=gene-C9E94_RS06390;Dbxref=GenBank:WP_001148008.1;Name=WP_001148008.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=C9E94_RS06390;product=transcription elongation factor GreA;protein_id=WP_001148008.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	47328	48761	.	+	.	ID=gene-C9E94_RS06395;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=C9E94_RS06395;old_locus_tag=C9E94_06555
NZ_PYJR01000049.1	Protein Homology	CDS	47328	48761	.	+	0	ID=cds-WP_001212675.1;Parent=gene-C9E94_RS06395;Dbxref=GenBank:WP_001212675.1;Name=WP_001212675.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462211.1;locus_tag=C9E94_RS06395;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_001212675.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	48892	50064	.	-	.	ID=gene-C9E94_RS06400;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=C9E94_RS06400;old_locus_tag=C9E94_06560
NZ_PYJR01000049.1	Protein Homology	CDS	48892	50064	.	-	0	ID=cds-WP_000673556.1;Parent=gene-C9E94_RS06400;Dbxref=GenBank:WP_000673556.1;Name=WP_000673556.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462212.1;locus_tag=C9E94_RS06400;product=Obg family GTPase CgtA;protein_id=WP_000673556.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	50080	51045	.	-	.	ID=gene-C9E94_RS06405;Name=C9E94_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06405;old_locus_tag=C9E94_06565
NZ_PYJR01000049.1	Protein Homology	CDS	50080	51045	.	-	0	ID=cds-WP_000813052.1;Parent=gene-C9E94_RS06405;Dbxref=GenBank:WP_000813052.1;Name=WP_000813052.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=C9E94_RS06405;product=DMT family transporter;protein_id=WP_000813052.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	51175	51432	.	-	.	ID=gene-C9E94_RS06410;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=C9E94_RS06410;old_locus_tag=C9E94_06570
NZ_PYJR01000049.1	Protein Homology	CDS	51175	51432	.	-	0	ID=cds-WP_000940593.1;Parent=gene-C9E94_RS06410;Dbxref=GenBank:WP_000940593.1;Name=WP_000940593.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=C9E94_RS06410;product=50S ribosomal protein L27;protein_id=WP_000940593.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	51452	51763	.	-	.	ID=gene-C9E94_RS06415;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=C9E94_RS06415;old_locus_tag=C9E94_06575
NZ_PYJR01000049.1	Protein Homology	CDS	51452	51763	.	-	0	ID=cds-WP_000271396.1;Parent=gene-C9E94_RS06415;Dbxref=GenBank:WP_000271396.1;Name=WP_000271396.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=C9E94_RS06415;product=50S ribosomal protein L21;protein_id=WP_000271396.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	52021	52992	.	+	.	ID=gene-C9E94_RS06420;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=C9E94_RS06420;old_locus_tag=C9E94_06580
NZ_PYJR01000049.1	Protein Homology	CDS	52021	52992	.	+	0	ID=cds-WP_001047354.1;Parent=gene-C9E94_RS06420;Dbxref=GenBank:WP_001047354.1;Name=WP_001047354.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462215.1;locus_tag=C9E94_RS06420;product=octaprenyl diphosphate synthase;protein_id=WP_001047354.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	53224	53511	.	+	.	ID=gene-C9E94_RS06425;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=C9E94_RS06425;old_locus_tag=C9E94_06585
NZ_PYJR01000049.1	Protein Homology	CDS	53224	53511	.	+	0	ID=cds-WP_000444167.1;Parent=gene-C9E94_RS06425;Dbxref=GenBank:WP_000444167.1;Name=WP_000444167.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462216.1;locus_tag=C9E94_RS06425;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_000444167.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	53570	54829	.	-	.	ID=gene-C9E94_RS06430;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=C9E94_RS06430;old_locus_tag=C9E94_06590
NZ_PYJR01000049.1	Protein Homology	CDS	53570	54829	.	-	0	ID=cds-WP_000357288.1;Parent=gene-C9E94_RS06430;Dbxref=GenBank:WP_000357288.1;Name=WP_000357288.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462217.1;locus_tag=C9E94_RS06430;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357288.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	54883	55137	.	-	.	ID=gene-C9E94_RS06435;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=C9E94_RS06435;old_locus_tag=C9E94_06595
NZ_PYJR01000049.1	Protein Homology	CDS	54883	55137	.	-	0	ID=cds-WP_001518349.1;Parent=gene-C9E94_RS06435;Dbxref=GenBank:WP_001518349.1;Name=WP_001518349.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=C9E94_RS06435;product=BolA family iron metabolism protein IbaG;protein_id=WP_001518349.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	55325	55621	.	-	.	ID=gene-C9E94_RS06440;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=C9E94_RS06440;old_locus_tag=C9E94_06600
NZ_PYJR01000049.1	Protein Homology	CDS	55325	55621	.	-	0	ID=cds-WP_000188844.1;Parent=gene-C9E94_RS06440;Dbxref=GenBank:WP_000188844.1;Name=WP_000188844.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462219.1;locus_tag=C9E94_RS06440;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_000188844.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	55621	56256	.	-	.	ID=gene-C9E94_RS06445;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=C9E94_RS06445;old_locus_tag=C9E94_06605
NZ_PYJR01000049.1	Protein Homology	CDS	55621	56256	.	-	0	ID=cds-WP_135400885.1;Parent=gene-C9E94_RS06445;Dbxref=GenBank:WP_135400885.1;Name=WP_135400885.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462220.1;locus_tag=C9E94_RS06445;product=phospholipid-binding protein MlaC;protein_id=WP_135400885.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	56275	56826	.	-	.	ID=gene-C9E94_RS06450;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=C9E94_RS06450;old_locus_tag=C9E94_06610
NZ_PYJR01000049.1	Protein Homology	CDS	56275	56826	.	-	0	ID=cds-WP_001193591.1;Parent=gene-C9E94_RS06450;Dbxref=GenBank:WP_001193591.1;Name=WP_001193591.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462221.1;locus_tag=C9E94_RS06450;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_001193591.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	56831	57613	.	-	.	ID=gene-C9E94_RS06455;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=C9E94_RS06455;old_locus_tag=C9E94_06615
NZ_PYJR01000049.1	Protein Homology	CDS	56831	57613	.	-	0	ID=cds-WP_000925786.1;Parent=gene-C9E94_RS06455;Dbxref=GenBank:WP_000925786.1;Name=WP_000925786.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=C9E94_RS06455;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_000925786.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	57621	58433	.	-	.	ID=gene-C9E94_RS06460;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=C9E94_RS06460;old_locus_tag=C9E94_06620
NZ_PYJR01000049.1	Protein Homology	CDS	57621	58433	.	-	0	ID=cds-WP_000531566.1;Parent=gene-C9E94_RS06460;Dbxref=GenBank:WP_000531566.1;Name=WP_000531566.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462223.1;locus_tag=C9E94_RS06460;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_000531566.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	58646	59623	.	+	.	ID=gene-C9E94_RS06465;Name=C9E94_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06465;old_locus_tag=C9E94_06625
NZ_PYJR01000049.1	Protein Homology	CDS	58646	59623	.	+	0	ID=cds-WP_000922736.1;Parent=gene-C9E94_RS06465;Dbxref=GenBank:WP_000922736.1;Name=WP_000922736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462224.1;locus_tag=C9E94_RS06465;product=calcium/sodium antiporter;protein_id=WP_000922736.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	59637	60623	.	+	.	ID=gene-C9E94_RS06470;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=C9E94_RS06470;old_locus_tag=C9E94_06630
NZ_PYJR01000049.1	Protein Homology	CDS	59637	60623	.	+	0	ID=cds-WP_023206689.1;Parent=gene-C9E94_RS06470;Dbxref=GenBank:WP_023206689.1;Name=WP_023206689.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462225.1;locus_tag=C9E94_RS06470;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_023206689.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	60644	61210	.	+	.	ID=gene-C9E94_RS06475;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=C9E94_RS06475;old_locus_tag=C9E94_06635
NZ_PYJR01000049.1	Protein Homology	CDS	60644	61210	.	+	0	ID=cds-WP_000030029.1;Parent=gene-C9E94_RS06475;Dbxref=GenBank:WP_000030029.1;Name=WP_000030029.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462226.1;locus_tag=C9E94_RS06475;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_000030029.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	61207	61782	.	+	.	ID=gene-C9E94_RS06480;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=C9E94_RS06480;old_locus_tag=C9E94_06640
NZ_PYJR01000049.1	Protein Homology	CDS	61207	61782	.	+	0	ID=cds-WP_000047845.1;Parent=gene-C9E94_RS06480;Dbxref=GenBank:WP_000047845.1;Name=WP_000047845.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462227.1;locus_tag=C9E94_RS06480;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000047845.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	61751	62305	.	+	.	ID=gene-C9E94_RS06485;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=C9E94_RS06485;old_locus_tag=C9E94_06645
NZ_PYJR01000049.1	Protein Homology	CDS	61751	62305	.	+	0	ID=cds-WP_000669770.1;Parent=gene-C9E94_RS06485;Dbxref=GenBank:WP_000669770.1;Name=WP_000669770.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462228.1;locus_tag=C9E94_RS06485;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_000669770.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	62312	63037	.	+	.	ID=gene-C9E94_RS06490;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=C9E94_RS06490;old_locus_tag=C9E94_06650
NZ_PYJR01000049.1	Protein Homology	CDS	62312	63037	.	+	0	ID=cds-WP_000224104.1;Parent=gene-C9E94_RS06490;Dbxref=GenBank:WP_000224104.1;Name=WP_000224104.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=C9E94_RS06490;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_000224104.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	63085	64518	.	+	.	ID=gene-C9E94_RS06495;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=C9E94_RS06495;old_locus_tag=C9E94_06655
NZ_PYJR01000049.1	Protein Homology	CDS	63085	64518	.	+	0	ID=cds-WP_000809018.1;Parent=gene-C9E94_RS06495;Dbxref=GenBank:WP_000809018.1;Name=WP_000809018.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462230.1;locus_tag=C9E94_RS06495;product=RNA polymerase factor sigma-54;protein_id=WP_000809018.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	64541	64828	.	+	.	ID=gene-C9E94_RS06500;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=C9E94_RS06500;old_locus_tag=C9E94_06660
NZ_PYJR01000049.1	Protein Homology	CDS	64541	64828	.	+	0	ID=cds-WP_001176589.1;Parent=gene-C9E94_RS06500;Dbxref=GenBank:WP_001176589.1;Name=WP_001176589.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462231.1;locus_tag=C9E94_RS06500;product=ribosome hibernation promoting factor;protein_id=WP_001176589.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	64946	65437	.	+	.	ID=gene-C9E94_RS06505;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=C9E94_RS06505;old_locus_tag=C9E94_06665
NZ_PYJR01000049.1	Protein Homology	CDS	64946	65437	.	+	0	ID=cds-WP_024155356.1;Parent=gene-C9E94_RS06505;Dbxref=GenBank:WP_024155356.1;Name=WP_024155356.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462232.1;locus_tag=C9E94_RS06505;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_024155356.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	65483	66337	.	+	.	ID=gene-C9E94_RS06510;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=C9E94_RS06510;old_locus_tag=C9E94_06670
NZ_PYJR01000049.1	Protein Homology	CDS	65483	66337	.	+	0	ID=cds-WP_000243749.1;Parent=gene-C9E94_RS06510;Dbxref=GenBank:WP_000243749.1;Name=WP_000243749.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462233.1;locus_tag=C9E94_RS06510;product=RNase adapter RapZ;protein_id=WP_000243749.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	66334	66606	.	+	.	ID=gene-C9E94_RS06515;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=C9E94_RS06515;old_locus_tag=C9E94_06675
NZ_PYJR01000049.1	Protein Homology	CDS	66334	66606	.	+	0	ID=cds-WP_000216797.1;Parent=gene-C9E94_RS06515;Dbxref=GenBank:WP_000216797.1;Name=WP_000216797.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=C9E94_RS06515;product=PTS phosphocarrier protein NPr;protein_id=WP_000216797.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	66856	67488	.	+	.	ID=gene-C9E94_RS06525;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=C9E94_RS06525;old_locus_tag=C9E94_06685
NZ_PYJR01000049.1	Protein Homology	CDS	66856	67488	.	+	0	ID=cds-WP_023219250.1;Parent=gene-C9E94_RS06525;Dbxref=GenBank:WP_023219250.1;Name=WP_023219250.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462235.1;locus_tag=C9E94_RS06525;product=PhoP regulatory network protein YrbL;protein_id=WP_023219250.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	67562	68290	.	-	.	ID=gene-C9E94_RS06530;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=C9E94_RS06530;old_locus_tag=C9E94_06690
NZ_PYJR01000049.1	Protein Homology	CDS	67562	68290	.	-	0	ID=cds-WP_000044653.1;Parent=gene-C9E94_RS06530;Dbxref=GenBank:WP_000044653.1;Name=WP_000044653.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462236.1;locus_tag=C9E94_RS06530;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_000044653.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	68287	68940	.	-	.	ID=gene-C9E94_RS06535;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=C9E94_RS06535;old_locus_tag=C9E94_06695
NZ_PYJR01000049.1	Protein Homology	CDS	68287	68940	.	-	0	ID=cds-WP_135400886.1;Parent=gene-C9E94_RS06535;Dbxref=GenBank:WP_135400886.1;Name=WP_135400886.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462237.1;locus_tag=C9E94_RS06535;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_135400886.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	69167	71503	.	-	.	ID=gene-C9E94_RS06540;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=C9E94_RS06540;old_locus_tag=C9E94_06700
NZ_PYJR01000049.1	Protein Homology	CDS	69167	71503	.	-	0	ID=cds-WP_000809826.1;Parent=gene-C9E94_RS06540;Dbxref=GenBank:WP_000809826.1;Name=WP_000809826.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462238.1;locus_tag=C9E94_RS06540;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_000809826.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	71597	72526	.	-	.	ID=gene-C9E94_RS06545;Name=C9E94_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06545;old_locus_tag=C9E94_06705
NZ_PYJR01000049.1	Protein Homology	CDS	71597	72526	.	-	0	ID=cds-WP_001176892.1;Parent=gene-C9E94_RS06545;Dbxref=GenBank:WP_001176892.1;Name=WP_001176892.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462239.1;locus_tag=C9E94_RS06545;product=TIGR01212 family radical SAM protein;protein_id=WP_001176892.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	73198	77658	.	+	.	ID=gene-C9E94_RS06550;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=C9E94_RS06550;old_locus_tag=C9E94_06715
NZ_PYJR01000049.1	Protein Homology	CDS	73198	77658	.	+	0	ID=cds-WP_000965014.1;Parent=gene-C9E94_RS06550;Dbxref=GenBank:WP_000965014.1;Name=WP_000965014.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=C9E94_RS06550;product=glutamate synthase large subunit;protein_id=WP_000965014.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	77668	79086	.	+	.	ID=gene-C9E94_RS06555;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=C9E94_RS06555;old_locus_tag=C9E94_06720
NZ_PYJR01000049.1	Protein Homology	CDS	77668	79086	.	+	0	ID=cds-WP_135400887.1;Parent=gene-C9E94_RS06555;Dbxref=GenBank:WP_135400887.1;Name=WP_135400887.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=C9E94_RS06555;product=glutamate synthase subunit GltD;protein_id=WP_135400887.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	79294	80397	.	+	.	ID=gene-C9E94_RS06560;Name=C9E94_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06560;old_locus_tag=C9E94_06725
NZ_PYJR01000049.1	Protein Homology	CDS	79294	80397	.	+	0	ID=cds-WP_135400888.1;Parent=gene-C9E94_RS06560;Dbxref=GenBank:WP_135400888.1;Name=WP_135400888.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462242.1;locus_tag=C9E94_RS06560;product=PDDEXK nuclease domain-containing protein;protein_id=WP_135400888.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	80513	81766	.	+	.	ID=gene-C9E94_RS06565;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=C9E94_RS06565;old_locus_tag=C9E94_06730
NZ_PYJR01000049.1	Protein Homology	CDS	80513	81766	.	+	0	ID=cds-WP_135400889.1;Parent=gene-C9E94_RS06565;Dbxref=GenBank:WP_135400889.1;Name=WP_135400889.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462243.1;locus_tag=C9E94_RS06565;product=cytosine permease;protein_id=WP_135400889.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	81753	83033	.	+	.	ID=gene-C9E94_RS06570;Name=C9E94_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06570;old_locus_tag=C9E94_06735
NZ_PYJR01000049.1	Protein Homology	CDS	81753	83033	.	+	0	ID=cds-WP_135400890.1;Parent=gene-C9E94_RS06570;Dbxref=GenBank:WP_135400890.1;Name=WP_135400890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462244.1;locus_tag=C9E94_RS06570;product=cytosine deaminase;protein_id=WP_135400890.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	83116	83583	.	-	.	ID=gene-C9E94_RS06575;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=C9E94_RS06575;old_locus_tag=C9E94_06740
NZ_PYJR01000049.1	Protein Homology	CDS	83116	83583	.	-	0	ID=cds-WP_000979900.1;Parent=gene-C9E94_RS06575;Dbxref=GenBank:WP_000979900.1;Name=WP_000979900.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462245.1;locus_tag=C9E94_RS06575;product=N-acetylneuraminate anomerase;protein_id=WP_000979900.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	83580	84455	.	-	.	ID=gene-C9E94_RS06580;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=C9E94_RS06580;old_locus_tag=C9E94_06745
NZ_PYJR01000049.1	Protein Homology	CDS	83580	84455	.	-	0	ID=cds-WP_023243675.1;Parent=gene-C9E94_RS06580;Dbxref=GenBank:WP_023243675.1;Name=WP_023243675.1;Ontology_term=GO:0019262,GO:0005524,GO:0009384;gbkey=CDS;gene=nanK;go_function=ATP binding|0005524||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462246.1;locus_tag=C9E94_RS06580;product=N-acetylmannosamine kinase;protein_id=WP_023243675.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	84452	85141	.	-	.	ID=gene-C9E94_RS06585;Name=C9E94_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06585;old_locus_tag=C9E94_06750
NZ_PYJR01000049.1	Protein Homology	CDS	84452	85141	.	-	0	ID=cds-WP_000054444.1;Parent=gene-C9E94_RS06585;Dbxref=GenBank:WP_000054444.1;Name=WP_000054444.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462247.1;locus_tag=C9E94_RS06585;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054444.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	85188	86678	.	-	.	ID=gene-C9E94_RS06590;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=C9E94_RS06590;old_locus_tag=C9E94_06755
NZ_PYJR01000049.1	Protein Homology	CDS	85188	86678	.	-	0	ID=cds-WP_000108071.1;Parent=gene-C9E94_RS06590;Dbxref=GenBank:WP_000108071.1;Name=WP_000108071.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462248.1;locus_tag=C9E94_RS06590;product=sialic acid transporter NanT;protein_id=WP_000108071.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	86794	87687	.	-	.	ID=gene-C9E94_RS06595;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=C9E94_RS06595;old_locus_tag=C9E94_06760
NZ_PYJR01000049.1	Protein Homology	CDS	86794	87687	.	-	0	ID=cds-WP_135400891.1;Parent=gene-C9E94_RS06595;Dbxref=GenBank:WP_135400891.1;Name=WP_135400891.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462249.1;locus_tag=C9E94_RS06595;product=N-acetylneuraminate lyase;protein_id=WP_135400891.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	87822	88613	.	-	.	ID=gene-C9E94_RS06600;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=C9E94_RS06600;old_locus_tag=C9E94_06765
NZ_PYJR01000049.1	Protein Homology	CDS	87822	88613	.	-	0	ID=cds-WP_000382926.1;Parent=gene-C9E94_RS06600;Dbxref=GenBank:WP_000382926.1;Name=WP_000382926.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462250.1;locus_tag=C9E94_RS06600;product=transcriptional regulator NanR;protein_id=WP_000382926.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	88722	89222	.	-	.	ID=gene-C9E94_RS06605;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=C9E94_RS06605;old_locus_tag=C9E94_06770
NZ_PYJR01000049.1	Protein Homology	CDS	88722	89222	.	-	0	ID=cds-WP_000366112.1;Parent=gene-C9E94_RS06605;Dbxref=GenBank:WP_000366112.1;Name=WP_000366112.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462251.1;locus_tag=C9E94_RS06605;product=ClpXP protease specificity-enhancing factor;protein_id=WP_000366112.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	89228	89866	.	-	.	ID=gene-C9E94_RS06610;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=C9E94_RS06610;old_locus_tag=C9E94_06775
NZ_PYJR01000049.1	Protein Homology	CDS	89228	89866	.	-	0	ID=cds-WP_000257298.1;Parent=gene-C9E94_RS06610;Dbxref=GenBank:WP_000257298.1;Name=WP_000257298.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=C9E94_RS06610;product=stringent starvation protein SspA;protein_id=WP_000257298.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	90180	90572	.	-	.	ID=gene-C9E94_RS06615;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=C9E94_RS06615;old_locus_tag=C9E94_06785
NZ_PYJR01000049.1	Protein Homology	CDS	90180	90572	.	-	0	ID=cds-WP_000829815.1;Parent=gene-C9E94_RS06615;Dbxref=GenBank:WP_000829815.1;Name=WP_000829815.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=C9E94_RS06615;product=30S ribosomal protein S9;protein_id=WP_000829815.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	90588	91016	.	-	.	ID=gene-C9E94_RS06620;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=C9E94_RS06620;old_locus_tag=C9E94_06790
NZ_PYJR01000049.1	Protein Homology	CDS	90588	91016	.	-	0	ID=cds-WP_000847559.1;Parent=gene-C9E94_RS06620;Dbxref=GenBank:WP_000847559.1;Name=WP_000847559.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=C9E94_RS06620;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	91318	92442	.	-	.	ID=gene-C9E94_RS06625;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=C9E94_RS06625;old_locus_tag=C9E94_06795
NZ_PYJR01000049.1	Protein Homology	CDS	91318	92442	.	-	0	ID=cds-WP_001191218.1;Parent=gene-C9E94_RS06625;Dbxref=GenBank:WP_001191218.1;Name=WP_001191218.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462256.1;locus_tag=C9E94_RS06625;product=cell division protein ZapE;protein_id=WP_001191218.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	92635	93033	.	+	.	ID=gene-C9E94_RS06630;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=C9E94_RS06630;old_locus_tag=C9E94_06800
NZ_PYJR01000049.1	Protein Homology	CDS	92635	93033	.	+	0	ID=cds-WP_001519074.1;Parent=gene-C9E94_RS06630;Dbxref=GenBank:WP_001519074.1;Name=WP_001519074.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=C9E94_RS06630;product=Z-ring associated protein ZapG;protein_id=WP_001519074.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	93190	94557	.	+	.	ID=gene-C9E94_RS06635;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=C9E94_RS06635;old_locus_tag=C9E94_06805
NZ_PYJR01000049.1	Protein Homology	CDS	93190	94557	.	+	0	ID=cds-WP_000716690.1;Parent=gene-C9E94_RS06635;Dbxref=GenBank:WP_000716690.1;Name=WP_000716690.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462258.1;locus_tag=C9E94_RS06635;product=serine endoprotease DegQ;protein_id=WP_000716690.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	94650	95720	.	+	.	ID=gene-C9E94_RS06640;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=C9E94_RS06640;old_locus_tag=C9E94_06810
NZ_PYJR01000049.1	Protein Homology	CDS	94650	95720	.	+	0	ID=cds-WP_000497732.1;Parent=gene-C9E94_RS06640;Dbxref=GenBank:WP_000497732.1;Name=WP_000497732.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462259.1;locus_tag=C9E94_RS06640;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_000497732.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	95754	96485	.	-	.	ID=gene-C9E94_RS06645;Name=C9E94_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06645;old_locus_tag=C9E94_06815
NZ_PYJR01000049.1	Protein Homology	CDS	95754	96485	.	-	0	ID=cds-WP_000602026.1;Parent=gene-C9E94_RS06645;Dbxref=GenBank:WP_000602026.1;Name=WP_000602026.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462260.1;locus_tag=C9E94_RS06645;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_000602026.1;transl_table=11
NZ_PYJR01000049.1	RefSeq	gene	96505	96698	.	-	.	ID=gene-C9E94_RS06650;Name=C9E94_RS06650;end_range=96698,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06650;old_locus_tag=C9E94_06820;partial=true
NZ_PYJR01000049.1	Protein Homology	CDS	96505	96698	.	-	2	ID=cds-WP_074421874.1;Parent=gene-C9E94_RS06650;Dbxref=GenBank:WP_074421874.1;Name=WP_074421874.1;Ontology_term=GO:0006814,GO:0016829;end_range=96698,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=C9E94_RS06650;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_074421874.1;transl_table=11
##sequence-region NZ_PYJR01000111.1 1 757
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000111.1	RefSeq	region	1	757	.	+	.	ID=NZ_PYJR01000111.1:1..757;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000111.1	RefSeq	pseudogene	301	757	.	+	.	ID=gene-C9E94_RS16585;Name=C9E94_RS16585;end_range=757,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS16585;old_locus_tag=C9E94_16975;partial=true;pseudo=true
NZ_PYJR01000111.1	Protein Homology	CDS	301	757	.	+	0	ID=cds-C9E94_RS16585;Parent=gene-C9E94_RS16585;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=757,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462381.1;locus_tag=C9E94_RS16585;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYJR01000050.1 1 673
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000050.1	RefSeq	region	1	673	.	+	.	ID=NZ_PYJR01000050.1:1..673;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000050.1	RefSeq	gene	65	523	.	-	.	ID=gene-C9E94_RS06660;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=C9E94_RS06660;old_locus_tag=C9E94_06830
NZ_PYJR01000050.1	Protein Homology	CDS	65	523	.	-	0	ID=cds-WP_000502120.1;Parent=gene-C9E94_RS06660;Dbxref=GenBank:WP_000502120.1;Name=WP_000502120.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=C9E94_RS06660;product=IS200/IS605-like element IS200F family transposase;protein_id=WP_000502120.1;transl_table=11
NZ_PYJR01000050.1	RefSeq	gene	480	673	.	-	.	ID=gene-C9E94_RS23435;Name=C9E94_RS23435;end_range=673,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23435;old_locus_tag=C9E94_06835;partial=true
NZ_PYJR01000050.1	GeneMarkS-2+	CDS	480	673	.	-	2	ID=cds-WP_000397091.1;Parent=gene-C9E94_RS23435;Dbxref=GenBank:WP_000397091.1;Name=WP_000397091.1;end_range=673,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS23435;partial=true;product=hypothetical protein;protein_id=WP_000397091.1;transl_table=11
##sequence-region NZ_PYJR01000116.1 1 662
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000116.1	RefSeq	region	1	662	.	+	.	ID=NZ_PYJR01000116.1:1..662;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000116.1	RefSeq	gene	1	540	.	-	.	ID=gene-C9E94_RS17480;Name=C9E94_RS17480;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9E94_RS17480;old_locus_tag=C9E94_17905;partial=true;start_range=.,1
NZ_PYJR01000116.1	cmsearch	rRNA	1	540	.	-	.	ID=rna-C9E94_RS17480;Parent=gene-C9E94_RS17480;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS17480;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_PYJR01000116.1	cmsearch	exon	1	540	.	-	.	ID=exon-C9E94_RS17480-1;Parent=rna-C9E94_RS17480;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS17480;partial=true;product=23S ribosomal RNA;start_range=.,1
##sequence-region NZ_PYJR01000011.1 1 617
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000011.1	RefSeq	region	1	617	.	+	.	ID=NZ_PYJR01000011.1:1..617;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000011.1	RefSeq	gene	1	617	.	-	.	ID=gene-C9E94_RS00940;Name=C9E94_RS00940;end_range=617,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9E94_RS00940;old_locus_tag=C9E94_00955;partial=true;start_range=.,1
NZ_PYJR01000011.1	cmsearch	rRNA	1	617	.	-	.	ID=rna-C9E94_RS00940;Parent=gene-C9E94_RS00940;Dbxref=RFAM:RF02541;end_range=617,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS00940;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_PYJR01000011.1	cmsearch	exon	1	617	.	-	.	ID=exon-C9E94_RS00940-1;Parent=rna-C9E94_RS00940;Dbxref=RFAM:RF02541;end_range=617,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS00940;partial=true;product=23S ribosomal RNA;start_range=.,1
##sequence-region NZ_PYJR01000024.1 1 570
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000024.1	RefSeq	region	1	570	.	+	.	ID=NZ_PYJR01000024.1:1..570;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000024.1	RefSeq	gene	1	478	.	-	.	ID=gene-C9E94_RS02190;Name=C9E94_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02190;old_locus_tag=C9E94_02245;partial=true;start_range=.,1
NZ_PYJR01000024.1	Protein Homology	CDS	1	478	.	-	0	ID=cds-WP_135369472.1;Parent=gene-C9E94_RS02190;Dbxref=GenBank:WP_135369472.1;Name=WP_135369472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460589.1;locus_tag=C9E94_RS02190;partial=true;product=hypothetical protein;protein_id=WP_135369472.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYJR01000018.1 1 495
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000018.1	RefSeq	region	1	495	.	+	.	ID=NZ_PYJR01000018.1:1..495;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000018.1	RefSeq	pseudogene	1	495	.	-	.	ID=gene-C9E94_RS01510;Name=C9E94_RS01510;end_range=495,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS01510;old_locus_tag=C9E94_01545;partial=true;pseudo=true;start_range=.,1
NZ_PYJR01000018.1	Protein Homology	CDS	1	495	.	-	2	ID=cds-C9E94_RS01510;Parent=gene-C9E94_RS01510;Note=catalyzes the formation of pyruvate from oxaloacetate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=495,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9E94_RS01510;partial=true;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYJR01000044.1 1 456
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000044.1	RefSeq	region	1	456	.	+	.	ID=NZ_PYJR01000044.1:1..456;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000044.1	RefSeq	pseudogene	1	456	.	+	.	ID=gene-C9E94_RS05345;Name=C9E94_RS05345;end_range=456,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS05345;old_locus_tag=C9E94_05490;partial=true;pseudo=true;start_range=.,1
NZ_PYJR01000044.1	Protein Homology	CDS	1	456	.	+	0	ID=cds-C9E94_RS05345;Parent=gene-C9E94_RS05345;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=456,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463127.1;locus_tag=C9E94_RS05345;partial=true;product=peptidase domain-containing ABC transporter;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYJR01000016.1 1 452
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000016.1	RefSeq	region	1	452	.	+	.	ID=NZ_PYJR01000016.1:1..452;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000016.1	RefSeq	gene	76	152	.	+	.	ID=gene-C9E94_RS01495;Name=C9E94_RS01495;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS01495;old_locus_tag=C9E94_01530
NZ_PYJR01000016.1	tRNAscan-SE	tRNA	76	152	.	+	.	ID=rna-C9E94_RS01495;Parent=gene-C9E94_RS01495;anticodon=(pos:110..112);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS01495;product=tRNA-Ile
NZ_PYJR01000016.1	tRNAscan-SE	exon	76	152	.	+	.	ID=exon-C9E94_RS01495-1;Parent=rna-C9E94_RS01495;anticodon=(pos:110..112);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS01495;product=tRNA-Ile
NZ_PYJR01000016.1	RefSeq	gene	262	337	.	+	.	ID=gene-C9E94_RS01500;Name=C9E94_RS01500;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS01500;old_locus_tag=C9E94_01535
NZ_PYJR01000016.1	tRNAscan-SE	tRNA	262	337	.	+	.	ID=rna-C9E94_RS01500;Parent=gene-C9E94_RS01500;anticodon=(pos:295..297);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS01500;product=tRNA-Ala
NZ_PYJR01000016.1	tRNAscan-SE	exon	262	337	.	+	.	ID=exon-C9E94_RS01500-1;Parent=rna-C9E94_RS01500;anticodon=(pos:295..297);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS01500;product=tRNA-Ala
##sequence-region NZ_PYJR01000060.1 1 430
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000060.1	RefSeq	region	1	430	.	+	.	ID=NZ_PYJR01000060.1:1..430;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
##sequence-region NZ_PYJR01000117.1 1 94372
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000117.1	RefSeq	region	1	94372	.	+	.	ID=NZ_PYJR01000117.1:1..94372;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000117.1	RefSeq	gene	40	579	.	+	.	ID=gene-C9E94_RS17485;Name=stiA;gbkey=Gene;gene=stiA;gene_biotype=protein_coding;locus_tag=C9E94_RS17485;old_locus_tag=C9E94_17910
NZ_PYJR01000117.1	Protein Homology	CDS	40	579	.	+	0	ID=cds-WP_000777532.1;Parent=gene-C9E94_RS17485;Dbxref=GenBank:WP_000777532.1;Name=WP_000777532.1;gbkey=CDS;gene=stiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459182.1;locus_tag=C9E94_RS17485;product=Sti fimbria major subunit StiA;protein_id=WP_000777532.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	626	1309	.	+	.	ID=gene-C9E94_RS17490;Name=stiB;gbkey=Gene;gene=stiB;gene_biotype=protein_coding;locus_tag=C9E94_RS17490;old_locus_tag=C9E94_17915
NZ_PYJR01000117.1	Protein Homology	CDS	626	1309	.	+	0	ID=cds-WP_001086413.1;Parent=gene-C9E94_RS17490;Dbxref=GenBank:WP_001086413.1;Name=WP_001086413.1;gbkey=CDS;gene=stiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459181.1;locus_tag=C9E94_RS17490;product=fimbrial biogenesis chaperone StiB;protein_id=WP_001086413.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	1336	3882	.	+	.	ID=gene-C9E94_RS17495;Name=C9E94_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17495;old_locus_tag=C9E94_17920
NZ_PYJR01000117.1	Protein Homology	CDS	1336	3882	.	+	0	ID=cds-WP_135401146.1;Parent=gene-C9E94_RS17495;Dbxref=GenBank:WP_135401146.1;Name=WP_135401146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459180.1;locus_tag=C9E94_RS17495;product=fimbrial outer membrane usher protein;protein_id=WP_135401146.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	3891	4970	.	+	.	ID=gene-C9E94_RS17500;Name=C9E94_RS17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17500;old_locus_tag=C9E94_17925
NZ_PYJR01000117.1	Protein Homology	CDS	3891	4970	.	+	0	ID=cds-WP_000794042.1;Parent=gene-C9E94_RS17500;Dbxref=GenBank:WP_000794042.1;Name=WP_000794042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459179.1;locus_tag=C9E94_RS17500;product=fimbrial protein;protein_id=WP_000794042.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	5084	5854	.	-	.	ID=gene-C9E94_RS17505;Name=C9E94_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17505;old_locus_tag=C9E94_17930
NZ_PYJR01000117.1	Protein Homology	CDS	5084	5854	.	-	0	ID=cds-WP_000983416.1;Parent=gene-C9E94_RS17505;Dbxref=GenBank:WP_000983416.1;Name=WP_000983416.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=C9E94_RS17505;product=ABC transporter permease;protein_id=WP_000983416.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	5851	6777	.	-	.	ID=gene-C9E94_RS17510;Name=C9E94_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17510;old_locus_tag=C9E94_17935
NZ_PYJR01000117.1	Protein Homology	CDS	5851	6777	.	-	0	ID=cds-WP_000150628.1;Parent=gene-C9E94_RS17510;Dbxref=GenBank:WP_000150628.1;Name=WP_000150628.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459177.1;locus_tag=C9E94_RS17510;product=ABC transporter ATP-binding protein;protein_id=WP_000150628.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	6886	7548	.	+	.	ID=gene-C9E94_RS17515;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=C9E94_RS17515;old_locus_tag=C9E94_17940
NZ_PYJR01000117.1	Protein Homology	CDS	6886	7548	.	+	0	ID=cds-WP_000651591.1;Parent=gene-C9E94_RS17515;Dbxref=GenBank:WP_000651591.1;Name=WP_000651591.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459176.1;locus_tag=C9E94_RS17515;product=carbonate dehydratase;protein_id=WP_000651591.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	7606	8142	.	-	.	ID=gene-C9E94_RS17520;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=C9E94_RS17520;old_locus_tag=C9E94_17945
NZ_PYJR01000117.1	Protein Homology	CDS	7606	8142	.	-	0	ID=cds-WP_000683342.1;Parent=gene-C9E94_RS17520;Dbxref=GenBank:WP_000683342.1;Name=WP_000683342.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=C9E94_RS17520;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683342.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	8348	10738	.	+	.	ID=gene-C9E94_RS17525;Name=C9E94_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17525;old_locus_tag=C9E94_17950
NZ_PYJR01000117.1	Protein Homology	CDS	8348	10738	.	+	0	ID=cds-WP_000829737.1;Parent=gene-C9E94_RS17525;Dbxref=GenBank:WP_000829737.1;Name=WP_000829737.1;Ontology_term=GO:0016614,GO:0048038,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459174.1;locus_tag=C9E94_RS17525;product=glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase;protein_id=WP_000829737.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	10816	12426	.	-	.	ID=gene-C9E94_RS17530;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=C9E94_RS17530;old_locus_tag=C9E94_17955
NZ_PYJR01000117.1	Protein Homology	CDS	10816	12426	.	-	0	ID=cds-WP_000946046.1;Parent=gene-C9E94_RS17530;Dbxref=GenBank:WP_000946046.1;Name=WP_000946046.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459173.1;locus_tag=C9E94_RS17530;product=multicopper oxidase CueO;protein_id=WP_000946046.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	12628	12975	.	+	.	ID=gene-C9E94_RS17535;Name=C9E94_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17535;old_locus_tag=C9E94_17960
NZ_PYJR01000117.1	Protein Homology	CDS	12628	12975	.	+	0	ID=cds-WP_000846613.1;Parent=gene-C9E94_RS17535;Dbxref=GenBank:WP_000846613.1;Name=WP_000846613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459172.1;locus_tag=C9E94_RS17535;product=YacC family pilotin-like protein;protein_id=WP_000846613.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	13082	13942	.	+	.	ID=gene-C9E94_RS17540;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=C9E94_RS17540;old_locus_tag=C9E94_17965
NZ_PYJR01000117.1	Protein Homology	CDS	13082	13942	.	+	0	ID=cds-WP_000829968.1;Parent=gene-C9E94_RS17540;Dbxref=GenBank:WP_000829968.1;Name=WP_000829968.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459171.1;locus_tag=C9E94_RS17540;product=polyamine aminopropyltransferase;protein_id=WP_000829968.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	13963	14757	.	+	.	ID=gene-C9E94_RS17545;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=C9E94_RS17545;old_locus_tag=C9E94_17970
NZ_PYJR01000117.1	Protein Homology	CDS	13963	14757	.	+	0	ID=cds-WP_000734276.1;Parent=gene-C9E94_RS17545;Dbxref=GenBank:WP_000734276.1;Name=WP_000734276.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459170.1;locus_tag=C9E94_RS17545;product=adenosylmethionine decarboxylase;protein_id=WP_000734276.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	14787	15554	.	-	.	ID=gene-C9E94_RS17550;Name=C9E94_RS17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17550;old_locus_tag=C9E94_17975
NZ_PYJR01000117.1	Protein Homology	CDS	14787	15554	.	-	0	ID=cds-WP_000678254.1;Parent=gene-C9E94_RS17550;Dbxref=GenBank:WP_000678254.1;Name=WP_000678254.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459169.1;locus_tag=C9E94_RS17550;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000678254.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	15564	16547	.	-	.	ID=gene-C9E94_RS17555;Name=C9E94_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17555;old_locus_tag=C9E94_17980
NZ_PYJR01000117.1	Protein Homology	CDS	15564	16547	.	-	0	ID=cds-WP_000448753.1;Parent=gene-C9E94_RS17555;Dbxref=GenBank:WP_000448753.1;Name=WP_000448753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459168.1;locus_tag=C9E94_RS17555;product=D-threonate 4-phosphate dehydrogenase;protein_id=WP_000448753.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	16537	17808	.	-	.	ID=gene-C9E94_RS17560;Name=dtnK;gbkey=Gene;gene=dtnK;gene_biotype=protein_coding;locus_tag=C9E94_RS17560;old_locus_tag=C9E94_17985
NZ_PYJR01000117.1	Protein Homology	CDS	16537	17808	.	-	0	ID=cds-WP_135401147.1;Parent=gene-C9E94_RS17560;Dbxref=GenBank:WP_135401147.1;Name=WP_135401147.1;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;gene=dtnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459167.1;locus_tag=C9E94_RS17560;product=D-threonate kinase;protein_id=WP_135401147.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	17805	18758	.	-	.	ID=gene-C9E94_RS17565;Name=C9E94_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17565;old_locus_tag=C9E94_17990
NZ_PYJR01000117.1	Protein Homology	CDS	17805	18758	.	-	0	ID=cds-WP_001022089.1;Parent=gene-C9E94_RS17565;Dbxref=GenBank:WP_001022089.1;Name=WP_001022089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459166.1;locus_tag=C9E94_RS17565;product=2-keto-3-deoxygluconate permease 1;protein_id=WP_001022089.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	18993	19355	.	-	.	ID=gene-C9E94_RS17570;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=C9E94_RS17570;old_locus_tag=C9E94_17995
NZ_PYJR01000117.1	Protein Homology	CDS	18993	19355	.	-	0	ID=cds-WP_000384308.1;Parent=gene-C9E94_RS17570;Dbxref=GenBank:WP_000384308.1;Name=WP_000384308.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459165.1;locus_tag=C9E94_RS17570;product=protein YacL;protein_id=WP_000384308.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	19626	19949	.	+	.	ID=gene-C9E94_RS17575;Name=C9E94_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17575;old_locus_tag=C9E94_18000
NZ_PYJR01000117.1	Protein Homology	CDS	19626	19949	.	+	0	ID=cds-WP_001101536.1;Parent=gene-C9E94_RS17575;Dbxref=GenBank:WP_001101536.1;Name=WP_001101536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101536.1;locus_tag=C9E94_RS17575;product=low molecular weight protein tyrosine phosphatase family protein;protein_id=WP_001101536.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	20359	20823	.	+	.	ID=gene-C9E94_RS17580;Name=C9E94_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17580;old_locus_tag=C9E94_18005
NZ_PYJR01000117.1	Protein Homology	CDS	20359	20823	.	+	0	ID=cds-WP_020999941.1;Parent=gene-C9E94_RS17580;Dbxref=GenBank:WP_020999941.1;Name=WP_020999941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110434.1;locus_tag=C9E94_RS17580;product=hypothetical protein;protein_id=WP_020999941.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	20863	23460	.	-	.	ID=gene-C9E94_RS17585;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=C9E94_RS17585;old_locus_tag=C9E94_18010
NZ_PYJR01000117.1	Protein Homology	CDS	20863	23460	.	-	0	ID=cds-WP_000888951.1;Parent=gene-C9E94_RS17585;Dbxref=GenBank:WP_000888951.1;Name=WP_000888951.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080489.1;locus_tag=C9E94_RS17585;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_000888951.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	23849	25474	.	+	.	ID=gene-C9E94_RS17590;Name=C9E94_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17590;old_locus_tag=C9E94_18020
NZ_PYJR01000117.1	Protein Homology	CDS	23849	25474	.	+	0	ID=cds-WP_135401148.1;Parent=gene-C9E94_RS17590;Dbxref=GenBank:WP_135401148.1;Name=WP_135401148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459162.2;locus_tag=C9E94_RS17590;product=DUF3300 domain-containing protein;protein_id=WP_135401148.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	25487	26278	.	+	.	ID=gene-C9E94_RS17595;Name=C9E94_RS17595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17595;old_locus_tag=C9E94_18025
NZ_PYJR01000117.1	Protein Homology	CDS	25487	26278	.	+	0	ID=cds-WP_000757452.1;Parent=gene-C9E94_RS17595;Dbxref=GenBank:WP_000757452.1;Name=WP_000757452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459161.1;locus_tag=C9E94_RS17595;product=DUF2950 family protein;protein_id=WP_000757452.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	26316	26600	.	-	.	ID=gene-C9E94_RS17600;Name=C9E94_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17600;old_locus_tag=C9E94_18030
NZ_PYJR01000117.1	Protein Homology	CDS	26316	26600	.	-	0	ID=cds-WP_000765363.1;Parent=gene-C9E94_RS17600;Dbxref=GenBank:WP_000765363.1;Name=WP_000765363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459160.1;locus_tag=C9E94_RS17600;product=outer membrane protein;protein_id=WP_000765363.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	26889	28313	.	-	.	ID=gene-C9E94_RS17605;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=C9E94_RS17605;old_locus_tag=C9E94_18035
NZ_PYJR01000117.1	Protein Homology	CDS	26889	28313	.	-	0	ID=cds-WP_001519338.1;Parent=gene-C9E94_RS17605;Dbxref=GenBank:WP_001519338.1;Name=WP_001519338.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=C9E94_RS17605;product=dihydrolipoyl dehydrogenase;protein_id=WP_001519338.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	28515	30395	.	-	.	ID=gene-C9E94_RS17610;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=C9E94_RS17610;old_locus_tag=C9E94_18040
NZ_PYJR01000117.1	Protein Homology	CDS	28515	30395	.	-	0	ID=cds-WP_135401149.1;Parent=gene-C9E94_RS17610;Dbxref=GenBank:WP_135401149.1;Name=WP_135401149.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459158.2;locus_tag=C9E94_RS17610;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_135401149.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	30410	33073	.	-	.	ID=gene-C9E94_RS17615;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=C9E94_RS17615;old_locus_tag=C9E94_18045
NZ_PYJR01000117.1	Protein Homology	CDS	30410	33073	.	-	0	ID=cds-WP_000003840.1;Parent=gene-C9E94_RS17615;Dbxref=GenBank:WP_000003840.1;Name=WP_000003840.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=C9E94_RS17615;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_000003840.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	33233	33997	.	-	.	ID=gene-C9E94_RS17620;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=C9E94_RS17620;old_locus_tag=C9E94_18050
NZ_PYJR01000117.1	Protein Homology	CDS	33233	33997	.	-	0	ID=cds-WP_000331771.1;Parent=gene-C9E94_RS17620;Dbxref=GenBank:WP_000331771.1;Name=WP_000331771.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459156.1;locus_tag=C9E94_RS17620;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_000331771.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	34560	35933	.	+	.	ID=gene-C9E94_RS17625;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=C9E94_RS17625;old_locus_tag=C9E94_18055
NZ_PYJR01000117.1	Protein Homology	CDS	34560	35933	.	+	0	ID=cds-WP_000969487.1;Parent=gene-C9E94_RS17625;Dbxref=GenBank:WP_000969487.1;Name=WP_000969487.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459155.1;locus_tag=C9E94_RS17625;product=aromatic amino acid transporter AroP;protein_id=WP_000969487.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	36097	37503	.	+	.	ID=gene-C9E94_RS17630;Name=C9E94_RS17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17630;old_locus_tag=C9E94_18060
NZ_PYJR01000117.1	Protein Homology	CDS	36097	37503	.	+	0	ID=cds-WP_000357539.1;Parent=gene-C9E94_RS17630;Dbxref=GenBank:WP_000357539.1;Name=WP_000357539.1;Ontology_term=GO:0006812,GO:0008643,GO:0015486,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glycoside-pentoside-hexuronide:cation symporter activity|0015486||IEA;go_process=monoatomic cation transport|0006812||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459154.1;locus_tag=C9E94_RS17630;product=glycoside-pentoside-hexuronide (GPH):cation symporter;protein_id=WP_000357539.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	37503	38453	.	+	.	ID=gene-C9E94_RS17635;Name=C9E94_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17635;old_locus_tag=C9E94_18065
NZ_PYJR01000117.1	Protein Homology	CDS	37503	38453	.	+	0	ID=cds-WP_135401150.1;Parent=gene-C9E94_RS17635;Dbxref=GenBank:WP_135401150.1;Name=WP_135401150.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459153.1;locus_tag=C9E94_RS17635;product=glycoside hydrolase family 43 protein;protein_id=WP_135401150.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	38545	39399	.	-	.	ID=gene-C9E94_RS17640;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=C9E94_RS17640;old_locus_tag=C9E94_18070
NZ_PYJR01000117.1	Protein Homology	CDS	38545	39399	.	-	0	ID=cds-WP_000172039.1;Parent=gene-C9E94_RS17640;Dbxref=GenBank:WP_000172039.1;Name=WP_000172039.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459152.1;locus_tag=C9E94_RS17640;product=beta-lactamase regulator AmpE;protein_id=WP_000172039.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	39396	39959	.	-	.	ID=gene-C9E94_RS17645;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=C9E94_RS17645;old_locus_tag=C9E94_18075
NZ_PYJR01000117.1	Protein Homology	CDS	39396	39959	.	-	0	ID=cds-WP_000936326.1;Parent=gene-C9E94_RS17645;Dbxref=GenBank:WP_000936326.1;Name=WP_000936326.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459151.1;locus_tag=C9E94_RS17645;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000936326.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	40047	40940	.	+	.	ID=gene-C9E94_RS17650;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=C9E94_RS17650;old_locus_tag=C9E94_18080
NZ_PYJR01000117.1	Protein Homology	CDS	40047	40940	.	+	0	ID=cds-WP_001135136.1;Parent=gene-C9E94_RS17650;Dbxref=GenBank:WP_001135136.1;Name=WP_001135136.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308140.1;locus_tag=C9E94_RS17650;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_001135136.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	41162	41599	.	+	.	ID=gene-C9E94_RS17660;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=C9E94_RS17660;old_locus_tag=C9E94_18090
NZ_PYJR01000117.1	Protein Homology	CDS	41162	41599	.	+	0	ID=cds-WP_000414989.1;Parent=gene-C9E94_RS17660;Dbxref=GenBank:WP_000414989.1;Name=WP_000414989.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459149.1;locus_tag=C9E94_RS17660;product=prepilin peptidase-dependent pilin;protein_id=WP_000414989.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	41609	42994	.	+	.	ID=gene-C9E94_RS17665;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=C9E94_RS17665;old_locus_tag=C9E94_18095
NZ_PYJR01000117.1	Protein Homology	CDS	41609	42994	.	+	0	ID=cds-WP_135401151.1;Parent=gene-C9E94_RS17665;Dbxref=GenBank:WP_135401151.1;Name=WP_135401151.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459148.1;locus_tag=C9E94_RS17665;product=type II secretion system protein GspE;protein_id=WP_135401151.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	42984	44186	.	+	.	ID=gene-C9E94_RS17670;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=C9E94_RS17670;old_locus_tag=C9E94_18100
NZ_PYJR01000117.1	Protein Homology	CDS	42984	44186	.	+	0	ID=cds-WP_115409279.1;Parent=gene-C9E94_RS17670;Dbxref=GenBank:WP_115409279.1;Name=WP_115409279.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459147.1;locus_tag=C9E94_RS17670;product=protein transport protein HofC;protein_id=WP_115409279.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	44217	45260	.	-	.	ID=gene-C9E94_RS17675;Name=C9E94_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17675;old_locus_tag=C9E94_18105
NZ_PYJR01000117.1	Protein Homology	CDS	44217	45260	.	-	0	ID=cds-WP_001217365.1;Parent=gene-C9E94_RS17675;Dbxref=GenBank:WP_001217365.1;Name=WP_001217365.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=C9E94_RS17675;product=GMP reductase;protein_id=WP_001217365.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	45486	46106	.	+	.	ID=gene-C9E94_RS17680;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=C9E94_RS17680;old_locus_tag=C9E94_18110
NZ_PYJR01000117.1	Protein Homology	CDS	45486	46106	.	+	0	ID=cds-WP_001270913.1;Parent=gene-C9E94_RS17680;Dbxref=GenBank:WP_001270913.1;Name=WP_001270913.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459145.1;locus_tag=C9E94_RS17680;product=dephospho-CoA kinase;protein_id=WP_001270913.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	46106	46849	.	+	.	ID=gene-C9E94_RS17685;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=C9E94_RS17685;old_locus_tag=C9E94_18115
NZ_PYJR01000117.1	Protein Homology	CDS	46106	46849	.	+	0	ID=cds-WP_000557441.1;Parent=gene-C9E94_RS17685;Dbxref=GenBank:WP_000557441.1;Name=WP_000557441.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459144.1;locus_tag=C9E94_RS17685;product=cell division protein ZapD;protein_id=WP_000557441.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	46859	47050	.	+	.	ID=gene-C9E94_RS17690;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=C9E94_RS17690;old_locus_tag=C9E94_18120
NZ_PYJR01000117.1	Protein Homology	CDS	46859	47050	.	+	0	ID=cds-WP_001286419.1;Parent=gene-C9E94_RS17690;Dbxref=GenBank:WP_001286419.1;Name=WP_001286419.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459143.1;locus_tag=C9E94_RS17690;product=DNA gyrase inhibitor YacG;protein_id=WP_001286419.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	pseudogene	47047	48019	.	-	.	ID=gene-C9E94_RS17695;Name=C9E94_RS17695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS17695;old_locus_tag=C9E94_18125;pseudo=true
NZ_PYJR01000117.1	Protein Homology	CDS	47047	48019	.	-	0	ID=cds-C9E94_RS17695;Parent=gene-C9E94_RS17695;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697068.1;locus_tag=C9E94_RS17695;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	48105	49094	.	+	.	ID=gene-C9E94_RS17700;Name=C9E94_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17700;old_locus_tag=C9E94_18130
NZ_PYJR01000117.1	Protein Homology	CDS	48105	49094	.	+	0	ID=cds-WP_001200034.1;Parent=gene-C9E94_RS17700;Dbxref=GenBank:WP_001200034.1;Name=WP_001200034.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200034.1;locus_tag=C9E94_RS17700;product=aldo/keto reductase;protein_id=WP_001200034.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	49128	49523	.	-	.	ID=gene-C9E94_RS17705;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=C9E94_RS17705;old_locus_tag=C9E94_18135
NZ_PYJR01000117.1	Protein Homology	CDS	49128	49523	.	-	0	ID=cds-WP_000736060.1;Parent=gene-C9E94_RS17705;Dbxref=GenBank:WP_000736060.1;Name=WP_000736060.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000736055.1;locus_tag=C9E94_RS17705;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_000736060.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	49679	52384	.	-	.	ID=gene-C9E94_RS17710;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=C9E94_RS17710;old_locus_tag=C9E94_18140
NZ_PYJR01000117.1	Protein Homology	CDS	49679	52384	.	-	0	ID=cds-WP_000905756.1;Parent=gene-C9E94_RS17710;Dbxref=GenBank:WP_000905756.1;Name=WP_000905756.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459141.1;locus_tag=C9E94_RS17710;product=preprotein translocase subunit SecA;protein_id=WP_000905756.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	52446	52943	.	-	.	ID=gene-C9E94_RS17715;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=C9E94_RS17715;old_locus_tag=C9E94_18145
NZ_PYJR01000117.1	Protein Homology	CDS	52446	52943	.	-	0	ID=cds-WP_000014336.1;Parent=gene-C9E94_RS17715;Dbxref=GenBank:WP_000014336.1;Name=WP_000014336.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308128.2;locus_tag=C9E94_RS17715;product=secA translation cis-regulator SecM;protein_id=WP_000014336.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	53221	54138	.	-	.	ID=gene-C9E94_RS17720;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=C9E94_RS17720;old_locus_tag=C9E94_18150
NZ_PYJR01000117.1	Protein Homology	CDS	53221	54138	.	-	0	ID=cds-WP_000595487.1;Parent=gene-C9E94_RS17720;Dbxref=GenBank:WP_000595487.1;Name=WP_000595487.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459139.1;locus_tag=C9E94_RS17720;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_000595487.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	54239	55390	.	-	.	ID=gene-C9E94_RS17725;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=C9E94_RS17725;old_locus_tag=C9E94_18155
NZ_PYJR01000117.1	Protein Homology	CDS	54239	55390	.	-	0	ID=cds-WP_000462785.1;Parent=gene-C9E94_RS17725;Dbxref=GenBank:WP_000462785.1;Name=WP_000462785.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=C9E94_RS17725;product=cell division protein FtsZ;protein_id=WP_000462785.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	55451	56713	.	-	.	ID=gene-C9E94_RS17730;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=C9E94_RS17730;old_locus_tag=C9E94_18160
NZ_PYJR01000117.1	Protein Homology	CDS	55451	56713	.	-	0	ID=cds-WP_000588463.1;Parent=gene-C9E94_RS17730;Dbxref=GenBank:WP_000588463.1;Name=WP_000588463.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459137.1;locus_tag=C9E94_RS17730;product=cell division protein FtsA;protein_id=WP_000588463.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	56710	57540	.	-	.	ID=gene-C9E94_RS17735;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=C9E94_RS17735;old_locus_tag=C9E94_18165
NZ_PYJR01000117.1	Protein Homology	CDS	56710	57540	.	-	0	ID=cds-WP_000075728.1;Parent=gene-C9E94_RS17735;Dbxref=GenBank:WP_000075728.1;Name=WP_000075728.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459136.1;locus_tag=C9E94_RS17735;product=cell division protein FtsQ;protein_id=WP_000075728.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	57542	58462	.	-	.	ID=gene-C9E94_RS17740;Name=C9E94_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17740;old_locus_tag=C9E94_18170
NZ_PYJR01000117.1	Protein Homology	CDS	57542	58462	.	-	0	ID=cds-WP_000763894.1;Parent=gene-C9E94_RS17740;Dbxref=GenBank:WP_000763894.1;Name=WP_000763894.1;Ontology_term=GO:0009252,GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459135.1;locus_tag=C9E94_RS17740;product=D-alanine--D-alanine ligase;protein_id=WP_000763894.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	58455	59930	.	-	.	ID=gene-C9E94_RS17745;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=C9E94_RS17745;old_locus_tag=C9E94_18175
NZ_PYJR01000117.1	Protein Homology	CDS	58455	59930	.	-	0	ID=cds-WP_001096072.1;Parent=gene-C9E94_RS17745;Dbxref=GenBank:WP_001096072.1;Name=WP_001096072.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459134.1;locus_tag=C9E94_RS17745;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_001096072.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	60049	61116	.	-	.	ID=gene-C9E94_RS17750;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=C9E94_RS17750;old_locus_tag=C9E94_18180
NZ_PYJR01000117.1	Protein Homology	CDS	60049	61116	.	-	0	ID=cds-WP_000016613.1;Parent=gene-C9E94_RS17750;Dbxref=GenBank:WP_000016613.1;Name=WP_000016613.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=C9E94_RS17750;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_000016613.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	61113	62357	.	-	.	ID=gene-C9E94_RS17755;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=C9E94_RS17755;old_locus_tag=C9E94_18185
NZ_PYJR01000117.1	Protein Homology	CDS	61113	62357	.	-	0	ID=cds-WP_001239803.1;Parent=gene-C9E94_RS17755;Dbxref=GenBank:WP_001239803.1;Name=WP_001239803.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459132.1;locus_tag=C9E94_RS17755;product=cell division protein FtsW;protein_id=WP_001239803.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	62357	63673	.	-	.	ID=gene-C9E94_RS17760;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=C9E94_RS17760;old_locus_tag=C9E94_18190
NZ_PYJR01000117.1	Protein Homology	CDS	62357	63673	.	-	0	ID=cds-WP_000796445.1;Parent=gene-C9E94_RS17760;Dbxref=GenBank:WP_000796445.1;Name=WP_000796445.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=C9E94_RS17760;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_000796445.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	63676	64758	.	-	.	ID=gene-C9E94_RS17765;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=C9E94_RS17765;old_locus_tag=C9E94_18195
NZ_PYJR01000117.1	Protein Homology	CDS	63676	64758	.	-	0	ID=cds-WP_000964141.1;Parent=gene-C9E94_RS17765;Dbxref=GenBank:WP_000964141.1;Name=WP_000964141.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=C9E94_RS17765;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000964141.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	64752	66110	.	-	.	ID=gene-C9E94_RS17770;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=C9E94_RS17770;old_locus_tag=C9E94_18200
NZ_PYJR01000117.1	Protein Homology	CDS	64752	66110	.	-	0	ID=cds-WP_000626636.1;Parent=gene-C9E94_RS17770;Dbxref=GenBank:WP_000626636.1;Name=WP_000626636.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459129.1;locus_tag=C9E94_RS17770;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_000626636.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	66107	67594	.	-	.	ID=gene-C9E94_RS17775;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=C9E94_RS17775;old_locus_tag=C9E94_18205
NZ_PYJR01000117.1	Protein Homology	CDS	66107	67594	.	-	0	ID=cds-WP_080203758.1;Parent=gene-C9E94_RS17775;Dbxref=GenBank:WP_080203758.1;Name=WP_080203758.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459128.1;locus_tag=C9E94_RS17775;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_080203758.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	67581	69347	.	-	.	ID=gene-C9E94_RS17780;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=C9E94_RS17780;old_locus_tag=C9E94_18210
NZ_PYJR01000117.1	Protein Homology	CDS	67581	69347	.	-	0	ID=cds-WP_000642235.1;Parent=gene-C9E94_RS17780;Dbxref=GenBank:WP_000642235.1;Name=WP_000642235.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=C9E94_RS17780;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000642235.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	69363	69728	.	-	.	ID=gene-C9E94_RS17785;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=C9E94_RS17785;old_locus_tag=C9E94_18215
NZ_PYJR01000117.1	Protein Homology	CDS	69363	69728	.	-	0	ID=cds-WP_000625651.1;Parent=gene-C9E94_RS17785;Dbxref=GenBank:WP_000625651.1;Name=WP_000625651.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=C9E94_RS17785;product=cell division protein FtsL;protein_id=WP_000625651.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	69725	70666	.	-	.	ID=gene-C9E94_RS17790;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=C9E94_RS17790;old_locus_tag=C9E94_18220
NZ_PYJR01000117.1	Protein Homology	CDS	69725	70666	.	-	0	ID=cds-WP_000970444.1;Parent=gene-C9E94_RS17790;Dbxref=GenBank:WP_000970444.1;Name=WP_000970444.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=C9E94_RS17790;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000970444.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	70668	71126	.	-	.	ID=gene-C9E94_RS17795;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=C9E94_RS17795;old_locus_tag=C9E94_18225
NZ_PYJR01000117.1	Protein Homology	CDS	70668	71126	.	-	0	ID=cds-WP_000488294.1;Parent=gene-C9E94_RS17795;Dbxref=GenBank:WP_000488294.1;Name=WP_000488294.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=C9E94_RS17795;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_000488294.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	71732	72736	.	-	.	ID=gene-C9E94_RS17800;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=C9E94_RS17800;old_locus_tag=C9E94_18230
NZ_PYJR01000117.1	Protein Homology	CDS	71732	72736	.	-	0	ID=cds-WP_000762392.1;Parent=gene-C9E94_RS17800;Dbxref=GenBank:WP_000762392.1;Name=WP_000762392.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459123.1;locus_tag=C9E94_RS17800;product=catabolite repressor/activator;protein_id=WP_000762392.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	73020	73511	.	-	.	ID=gene-C9E94_RS17805;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=C9E94_RS17805;old_locus_tag=C9E94_18235
NZ_PYJR01000117.1	Protein Homology	CDS	73020	73511	.	-	0	ID=cds-WP_001563086.1;Parent=gene-C9E94_RS17805;Dbxref=GenBank:WP_001563086.1;Name=WP_001563086.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=C9E94_RS17805;product=acetolactate synthase small subunit;protein_id=WP_001563086.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	73514	75238	.	-	.	ID=gene-C9E94_RS17810;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=C9E94_RS17810;old_locus_tag=C9E94_18240
NZ_PYJR01000117.1	Protein Homology	CDS	73514	75238	.	-	0	ID=cds-WP_167853656.1;Parent=gene-C9E94_RS17810;Dbxref=GenBank:WP_167853656.1;Name=WP_167853656.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=C9E94_RS17810;product=acetolactate synthase 3 large subunit;protein_id=WP_167853656.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	75560	76504	.	-	.	ID=gene-C9E94_RS17815;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=C9E94_RS17815;old_locus_tag=C9E94_18245
NZ_PYJR01000117.1	Protein Homology	CDS	75560	76504	.	-	0	ID=cds-WP_001115420.1;Parent=gene-C9E94_RS17815;Dbxref=GenBank:WP_001115420.1;Name=WP_001115420.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459120.1;locus_tag=C9E94_RS17815;product=transcriptional regulator LeuO;protein_id=WP_001115420.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	77161	77247	.	+	.	ID=gene-C9E94_RS17820;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=C9E94_RS17820;old_locus_tag=C9E94_18250
NZ_PYJR01000117.1	Protein Homology	CDS	77161	77247	.	+	0	ID=cds-WP_001575587.1;Parent=gene-C9E94_RS17820;Dbxref=GenBank:WP_001575587.1;Name=WP_001575587.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459119.1;locus_tag=C9E94_RS17820;product=leu operon leader peptide;protein_id=WP_001575587.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	77335	78906	.	+	.	ID=gene-C9E94_RS17825;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=C9E94_RS17825;old_locus_tag=C9E94_18255
NZ_PYJR01000117.1	Protein Homology	CDS	77335	78906	.	+	0	ID=cds-WP_000082819.1;Parent=gene-C9E94_RS17825;Dbxref=GenBank:WP_000082819.1;Name=WP_000082819.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=C9E94_RS17825;product=2-isopropylmalate synthase;protein_id=WP_000082819.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	78906	79997	.	+	.	ID=gene-C9E94_RS17830;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=C9E94_RS17830;old_locus_tag=C9E94_18260
NZ_PYJR01000117.1	Protein Homology	CDS	78906	79997	.	+	0	ID=cds-WP_000042336.1;Parent=gene-C9E94_RS17830;Dbxref=GenBank:WP_000042336.1;Name=WP_000042336.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=C9E94_RS17830;product=3-isopropylmalate dehydrogenase;protein_id=WP_000042336.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	80000	81400	.	+	.	ID=gene-C9E94_RS17835;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=C9E94_RS17835;old_locus_tag=C9E94_18265
NZ_PYJR01000117.1	Protein Homology	CDS	80000	81400	.	+	0	ID=cds-WP_135401152.1;Parent=gene-C9E94_RS17835;Dbxref=GenBank:WP_135401152.1;Name=WP_135401152.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459116.1;locus_tag=C9E94_RS17835;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_135401152.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	81411	82016	.	+	.	ID=gene-C9E94_RS17840;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=C9E94_RS17840;old_locus_tag=C9E94_18270
NZ_PYJR01000117.1	Protein Homology	CDS	81411	82016	.	+	0	ID=cds-WP_000818267.1;Parent=gene-C9E94_RS17840;Dbxref=GenBank:WP_000818267.1;Name=WP_000818267.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459115.1;locus_tag=C9E94_RS17840;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000818267.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	82352	82474	.	-	.	ID=gene-C9E94_RS17845;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=C9E94_RS17845;old_locus_tag=C9E94_18275
NZ_PYJR01000117.1	Protein Homology	CDS	82352	82474	.	-	0	ID=cds-WP_001248755.1;Parent=gene-C9E94_RS17845;Dbxref=GenBank:WP_001248755.1;Name=WP_001248755.1;Ontology_term=GO:0046325;gbkey=CDS;gene=sgrT;go_process=negative regulation of D-glucose import|0046325||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248755.1;locus_tag=C9E94_RS17845;product=glucose uptake inhibitor SgrT;protein_id=WP_001248755.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	82567	84225	.	+	.	ID=gene-C9E94_RS17850;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=C9E94_RS17850;old_locus_tag=C9E94_18280
NZ_PYJR01000117.1	Protein Homology	CDS	82567	84225	.	+	0	ID=cds-WP_001139028.1;Parent=gene-C9E94_RS17850;Dbxref=GenBank:WP_001139028.1;Name=WP_001139028.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459114.1;locus_tag=C9E94_RS17850;product=HTH-type transcriptional regulator SgrR;protein_id=WP_001139028.1;transl_table=11
NZ_PYJR01000117.1	cmsearch	riboswitch	84272	84371	.	+	.	ID=id-NZ_PYJR01000117.1:84272..84371;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PYJR01000117.1	RefSeq	gene	84403	85386	.	+	.	ID=gene-C9E94_RS17855;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=C9E94_RS17855;old_locus_tag=C9E94_18285
NZ_PYJR01000117.1	Protein Homology	CDS	84403	85386	.	+	0	ID=cds-WP_000915326.1;Parent=gene-C9E94_RS17855;Dbxref=GenBank:WP_000915326.1;Name=WP_000915326.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459113.1;locus_tag=C9E94_RS17855;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_000915326.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	85362	86972	.	+	.	ID=gene-C9E94_RS17860;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=C9E94_RS17860;old_locus_tag=C9E94_18290
NZ_PYJR01000117.1	Protein Homology	CDS	85362	86972	.	+	0	ID=cds-WP_135401153.1;Parent=gene-C9E94_RS17860;Dbxref=GenBank:WP_135401153.1;Name=WP_135401153.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459112.1;locus_tag=C9E94_RS17860;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_135401153.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	86956	87663	.	+	.	ID=gene-C9E94_RS17865;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=C9E94_RS17865;old_locus_tag=C9E94_18295
NZ_PYJR01000117.1	Protein Homology	CDS	86956	87663	.	+	0	ID=cds-WP_000915976.1;Parent=gene-C9E94_RS17865;Dbxref=GenBank:WP_000915976.1;Name=WP_000915976.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459111.1;locus_tag=C9E94_RS17865;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_000915976.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	87702	88469	.	-	.	ID=gene-C9E94_RS17870;Name=C9E94_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17870;old_locus_tag=C9E94_18300
NZ_PYJR01000117.1	Protein Homology	CDS	87702	88469	.	-	0	ID=cds-WP_001148369.1;Parent=gene-C9E94_RS17870;Dbxref=GenBank:WP_001148369.1;Name=WP_001148369.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459110.1;locus_tag=C9E94_RS17870;product=DedA family protein;protein_id=WP_001148369.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	88588	89433	.	-	.	ID=gene-C9E94_RS17875;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=C9E94_RS17875;old_locus_tag=C9E94_18305
NZ_PYJR01000117.1	Protein Homology	CDS	88588	89433	.	-	0	ID=cds-WP_000852387.1;Parent=gene-C9E94_RS17875;Dbxref=GenBank:WP_000852387.1;Name=WP_000852387.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459109.1;locus_tag=C9E94_RS17875;product=arabinose operon transcriptional regulator AraC;protein_id=WP_000852387.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	89773	91482	.	+	.	ID=gene-C9E94_RS17880;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=C9E94_RS17880;old_locus_tag=C9E94_18310
NZ_PYJR01000117.1	Protein Homology	CDS	89773	91482	.	+	0	ID=cds-WP_031605842.1;Parent=gene-C9E94_RS17880;Dbxref=GenBank:WP_031605842.1;Name=WP_031605842.1;Ontology_term=GO:0019568,GO:0005524,GO:0008741;gbkey=CDS;gene=araB;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459108.1;locus_tag=C9E94_RS17880;product=ribulokinase;protein_id=WP_031605842.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	91493	92995	.	+	.	ID=gene-C9E94_RS17885;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=C9E94_RS17885;old_locus_tag=C9E94_18315
NZ_PYJR01000117.1	Protein Homology	CDS	91493	92995	.	+	0	ID=cds-WP_000151693.1;Parent=gene-C9E94_RS17885;Dbxref=GenBank:WP_000151693.1;Name=WP_000151693.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459107.1;locus_tag=C9E94_RS17885;product=L-arabinose isomerase;protein_id=WP_000151693.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	93136	93831	.	+	.	ID=gene-C9E94_RS17890;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=C9E94_RS17890;old_locus_tag=C9E94_18320
NZ_PYJR01000117.1	Protein Homology	CDS	93136	93831	.	+	0	ID=cds-WP_000888683.1;Parent=gene-C9E94_RS17890;Dbxref=GenBank:WP_000888683.1;Name=WP_000888683.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459106.1;locus_tag=C9E94_RS17890;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000888683.1;transl_table=11
NZ_PYJR01000117.1	RefSeq	gene	93837	94256	.	-	.	ID=gene-C9E94_RS17895;Name=C9E94_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17895;old_locus_tag=C9E94_18325
NZ_PYJR01000117.1	Protein Homology	CDS	93837	94256	.	-	0	ID=cds-WP_001103156.1;Parent=gene-C9E94_RS17895;Dbxref=GenBank:WP_001103156.1;Name=WP_001103156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459105.1;locus_tag=C9E94_RS17895;product=DUF4751 family protein;protein_id=WP_001103156.1;transl_table=11
##sequence-region NZ_PYJR01000010.1 1 397
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000010.1	RefSeq	region	1	397	.	+	.	ID=NZ_PYJR01000010.1:1..397;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000010.1	RefSeq	gene	1	94	.	-	.	ID=gene-C9E94_RS00925;Name=C9E94_RS00925;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E94_RS00925;old_locus_tag=C9E94_00940;partial=true;start_range=.,1
NZ_PYJR01000010.1	cmsearch	ncRNA	1	94	.	-	.	ID=rna-C9E94_RS00925;Parent=gene-C9E94_RS00925;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS00925;partial=true;product=RtT sRNA;start_range=.,1
NZ_PYJR01000010.1	cmsearch	exon	1	94	.	-	.	ID=exon-C9E94_RS00925-1;Parent=rna-C9E94_RS00925;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS00925;partial=true;product=RtT sRNA;start_range=.,1
NZ_PYJR01000010.1	RefSeq	gene	138	268	.	-	.	ID=gene-C9E94_RS00930;Name=C9E94_RS00930;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E94_RS00930;old_locus_tag=C9E94_00945
NZ_PYJR01000010.1	cmsearch	ncRNA	138	268	.	-	.	ID=rna-C9E94_RS00930;Parent=gene-C9E94_RS00930;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS00930;product=RtT sRNA
NZ_PYJR01000010.1	cmsearch	exon	138	268	.	-	.	ID=exon-C9E94_RS00930-1;Parent=rna-C9E94_RS00930;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS00930;product=RtT sRNA
NZ_PYJR01000010.1	RefSeq	gene	312	396	.	-	.	ID=gene-C9E94_RS00935;Name=C9E94_RS00935;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS00935;old_locus_tag=C9E94_00950
NZ_PYJR01000010.1	tRNAscan-SE	tRNA	312	396	.	-	.	ID=rna-C9E94_RS00935;Parent=gene-C9E94_RS00935;anticodon=(pos:complement(360..362));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS00935;product=tRNA-Tyr
NZ_PYJR01000010.1	tRNAscan-SE	exon	312	396	.	-	.	ID=exon-C9E94_RS00935-1;Parent=rna-C9E94_RS00935;anticodon=(pos:complement(360..362));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS00935;product=tRNA-Tyr
##sequence-region NZ_PYJR01000020.1 1 387
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000020.1	RefSeq	region	1	387	.	+	.	ID=NZ_PYJR01000020.1:1..387;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000020.1	RefSeq	pseudogene	1	387	.	+	.	ID=gene-C9E94_RS01665;Name=C9E94_RS01665;end_range=387,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS01665;old_locus_tag=C9E94_01700;partial=true;pseudo=true;start_range=.,1
NZ_PYJR01000020.1	Protein Homology	CDS	1	387	.	+	2	ID=cds-C9E94_RS01665;Parent=gene-C9E94_RS01665;Note=catalyzes the formation of pyruvate from oxaloacetate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=387,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9E94_RS01665;partial=true;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYJR01000104.1 1 357
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000104.1	RefSeq	region	1	357	.	+	.	ID=NZ_PYJR01000104.1:1..357;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000104.1	RefSeq	gene	1	329	.	+	.	ID=gene-C9E94_RS15415;Name=C9E94_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15415;old_locus_tag=C9E94_15790;partial=true;start_range=.,1
NZ_PYJR01000104.1	Protein Homology	CDS	1	329	.	+	2	ID=cds-WP_135401120.1;Parent=gene-C9E94_RS15415;Dbxref=GenBank:WP_135401120.1;Name=WP_135401120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9E94_RS15415;partial=true;product=biotin/lipoyl-containing protein;protein_id=WP_135401120.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYJR01000022.1 1 351
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000022.1	RefSeq	region	1	351	.	+	.	ID=NZ_PYJR01000022.1:1..351;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000022.1	RefSeq	gene	1	351	.	-	.	ID=gene-C9E94_RS02060;Name=C9E94_RS02060;end_range=351,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02060;old_locus_tag=C9E94_02115;partial=true;start_range=.,1
NZ_PYJR01000022.1	Protein Homology	CDS	1	351	.	-	0	ID=cds-WP_439897084.1;Parent=gene-C9E94_RS02060;Dbxref=GenBank:WP_439897084.1;Name=WP_439897084.1;Ontology_term=GO:0071973,GO:0005198;end_range=351,.;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461698.1;locus_tag=C9E94_RS02060;partial=true;product=flagellin N-terminal helical domain-containing protein;protein_id=WP_439897084.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYJR01000134.1 1 351
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000134.1	RefSeq	region	1	351	.	+	.	ID=NZ_PYJR01000134.1:1..351;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000134.1	RefSeq	gene	1	323	.	+	.	ID=gene-C9E94_RS21635;Name=C9E94_RS21635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21635;old_locus_tag=C9E94_22185;partial=true;start_range=.,1
NZ_PYJR01000134.1	Protein Homology	CDS	1	323	.	+	2	ID=cds-WP_135401224.1;Parent=gene-C9E94_RS21635;Dbxref=GenBank:WP_135401224.1;Name=WP_135401224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9E94_RS21635;partial=true;product=biotin/lipoyl-containing protein;protein_id=WP_135401224.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYJR01000064.1 1 293
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000064.1	RefSeq	region	1	293	.	+	.	ID=NZ_PYJR01000064.1:1..293;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000064.1	RefSeq	gene	92	167	.	+	.	ID=gene-C9E94_RS08710;Name=C9E94_RS08710;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS08710;old_locus_tag=C9E94_08900
NZ_PYJR01000064.1	tRNAscan-SE	tRNA	92	167	.	+	.	ID=rna-C9E94_RS08710;Parent=gene-C9E94_RS08710;anticodon=(pos:126..128);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS08710;product=tRNA-Glu
NZ_PYJR01000064.1	tRNAscan-SE	exon	92	167	.	+	.	ID=exon-C9E94_RS08710-1;Parent=rna-C9E94_RS08710;anticodon=(pos:126..128);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS08710;product=tRNA-Glu
##sequence-region NZ_PYJR01000017.1 1 288
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000017.1	RefSeq	region	1	288	.	+	.	ID=NZ_PYJR01000017.1:1..288;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000017.1	RefSeq	gene	212	287	.	+	.	ID=gene-C9E94_RS01505;Name=C9E94_RS01505;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS01505;old_locus_tag=C9E94_01540
NZ_PYJR01000017.1	tRNAscan-SE	tRNA	212	287	.	+	.	ID=rna-C9E94_RS01505;Parent=gene-C9E94_RS01505;anticodon=(pos:245..247);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS01505;product=tRNA-Gly
NZ_PYJR01000017.1	tRNAscan-SE	exon	212	287	.	+	.	ID=exon-C9E94_RS01505-1;Parent=rna-C9E94_RS01505;anticodon=(pos:245..247);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS01505;product=tRNA-Gly
##sequence-region NZ_PYJR01000001.1 1 253
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000001.1	RefSeq	region	1	253	.	+	.	ID=NZ_PYJR01000001.1:1..253;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000001.1	RefSeq	gene	82	168	.	+	.	ID=gene-C9E94_RS00005;Name=C9E94_RS00005;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS00005;old_locus_tag=C9E94_00005
NZ_PYJR01000001.1	tRNAscan-SE	tRNA	82	168	.	+	.	ID=rna-C9E94_RS00005;Parent=gene-C9E94_RS00005;anticodon=(pos:116..118);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS00005;product=tRNA-Leu
NZ_PYJR01000001.1	tRNAscan-SE	exon	82	168	.	+	.	ID=exon-C9E94_RS00005-1;Parent=rna-C9E94_RS00005;anticodon=(pos:116..118);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS00005;product=tRNA-Leu
##sequence-region NZ_PYJR01000009.1 1 249
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000009.1	RefSeq	region	1	249	.	+	.	ID=NZ_PYJR01000009.1:1..249;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000009.1	RefSeq	gene	1	152	.	+	.	ID=gene-C9E94_RS00920;Name=C9E94_RS00920;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E94_RS00920;old_locus_tag=C9E94_00935;partial=true;start_range=.,1
NZ_PYJR01000009.1	cmsearch	ncRNA	1	152	.	+	.	ID=rna-C9E94_RS00920;Parent=gene-C9E94_RS00920;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS00920;partial=true;product=RtT sRNA;start_range=.,1
NZ_PYJR01000009.1	cmsearch	exon	1	152	.	+	.	ID=exon-C9E94_RS00920-1;Parent=rna-C9E94_RS00920;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS00920;partial=true;product=RtT sRNA;start_range=.,1
##sequence-region NZ_PYJR01000059.1 1 248
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000059.1	RefSeq	region	1	248	.	+	.	ID=NZ_PYJR01000059.1:1..248;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000059.1	RefSeq	pseudogene	1	163	.	-	.	ID=gene-C9E94_RS07890;Name=C9E94_RS07890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS07890;old_locus_tag=C9E94_08070;partial=true;pseudo=true;start_range=.,1
NZ_PYJR01000059.1	Protein Homology	CDS	1	163	.	-	0	ID=cds-C9E94_RS07890;Parent=gene-C9E94_RS07890;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9E94_RS07890;partial=true;product=oxaloacetate decarboxylase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYJR01000059.1	RefSeq	pseudogene	179	248	.	-	.	ID=gene-C9E94_RS07895;Name=C9E94_RS07895;end_range=248,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS07895;old_locus_tag=C9E94_08075;partial=true;pseudo=true
NZ_PYJR01000059.1	Protein Homology	CDS	179	248	.	-	1	ID=cds-C9E94_RS07895;Parent=gene-C9E94_RS07895;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=248,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462263.1;locus_tag=C9E94_RS07895;partial=true;product=oxaloacetate decarboxylase subunit gamma;pseudo=true;transl_table=11
##sequence-region NZ_PYJR01000031.1 1 90744
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000031.1	RefSeq	region	1	90744	.	+	.	ID=NZ_PYJR01000031.1:1..90744;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000031.1	RefSeq	gene	346	1566	.	+	.	ID=gene-C9E94_RS02835;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=C9E94_RS02835;old_locus_tag=C9E94_02910
NZ_PYJR01000031.1	Protein Homology	CDS	346	1566	.	+	0	ID=cds-WP_000410844.1;Parent=gene-C9E94_RS02835;Dbxref=GenBank:WP_000410844.1;Name=WP_000410844.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=L-arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463327.1;locus_tag=C9E94_RS02835;product=arginine deiminase;protein_id=WP_000410844.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	1577	2509	.	+	.	ID=gene-C9E94_RS02840;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=C9E94_RS02840;old_locus_tag=C9E94_02915
NZ_PYJR01000031.1	Protein Homology	CDS	1577	2509	.	+	0	ID=cds-WP_000428751.1;Parent=gene-C9E94_RS02840;Dbxref=GenBank:WP_000428751.1;Name=WP_000428751.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463326.1;locus_tag=C9E94_RS02840;product=carbamate kinase;protein_id=WP_000428751.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	2621	3625	.	+	.	ID=gene-C9E94_RS02845;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=C9E94_RS02845;old_locus_tag=C9E94_02920
NZ_PYJR01000031.1	Protein Homology	CDS	2621	3625	.	+	0	ID=cds-WP_000237031.1;Parent=gene-C9E94_RS02845;Dbxref=GenBank:WP_000237031.1;Name=WP_000237031.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463325.1;locus_tag=C9E94_RS02845;product=ornithine carbamoyltransferase;protein_id=WP_000237031.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	3681	5084	.	+	.	ID=gene-C9E94_RS02850;Name=C9E94_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02850;old_locus_tag=C9E94_02925
NZ_PYJR01000031.1	Protein Homology	CDS	3681	5084	.	+	0	ID=cds-WP_000514435.1;Parent=gene-C9E94_RS02850;Dbxref=GenBank:WP_000514435.1;Name=WP_000514435.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463324.1;locus_tag=C9E94_RS02850;product=YfcC family protein;protein_id=WP_000514435.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	5271	5759	.	+	.	ID=gene-C9E94_RS02855;Name=C9E94_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02855;old_locus_tag=C9E94_02930
NZ_PYJR01000031.1	Protein Homology	CDS	5271	5759	.	+	0	ID=cds-WP_000666051.1;Parent=gene-C9E94_RS02855;Dbxref=GenBank:WP_000666051.1;Name=WP_000666051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463323.1;locus_tag=C9E94_RS02855;product=arginine repressor;protein_id=WP_000666051.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	pseudogene	5729	5870	.	-	.	ID=gene-C9E94_RS02860;Name=C9E94_RS02860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS02860;old_locus_tag=C9E94_02935;pseudo=true
NZ_PYJR01000031.1	Protein Homology	CDS	5729	5870	.	-	0	ID=cds-C9E94_RS02860;Parent=gene-C9E94_RS02860;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453732.1;locus_tag=C9E94_RS02860;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	5850	5951	.	+	.	ID=gene-C9E94_RS02865;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=C9E94_RS02865;old_locus_tag=C9E94_02940
NZ_PYJR01000031.1	Protein Homology	CDS	5850	5951	.	+	0	ID=cds-WP_135400801.1;Parent=gene-C9E94_RS02865;Dbxref=GenBank:WP_135400801.1;Name=WP_135400801.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=C9E94_RS02865;product=pyr operon leader peptide;protein_id=WP_135400801.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	5987	6922	.	+	.	ID=gene-C9E94_RS02870;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=C9E94_RS02870;old_locus_tag=C9E94_02945
NZ_PYJR01000031.1	Protein Homology	CDS	5987	6922	.	+	0	ID=cds-WP_000013055.1;Parent=gene-C9E94_RS02870;Dbxref=GenBank:WP_000013055.1;Name=WP_000013055.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463320.1;locus_tag=C9E94_RS02870;product=aspartate carbamoyltransferase;protein_id=WP_000013055.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	6935	7396	.	+	.	ID=gene-C9E94_RS02875;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=C9E94_RS02875;old_locus_tag=C9E94_02950
NZ_PYJR01000031.1	Protein Homology	CDS	6935	7396	.	+	0	ID=cds-WP_000148567.1;Parent=gene-C9E94_RS02875;Dbxref=GenBank:WP_000148567.1;Name=WP_000148567.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=C9E94_RS02875;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_000148567.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	7473	7859	.	+	.	ID=gene-C9E94_RS02880;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=C9E94_RS02880;old_locus_tag=C9E94_02955
NZ_PYJR01000031.1	Protein Homology	CDS	7473	7859	.	+	0	ID=cds-WP_000047544.1;Parent=gene-C9E94_RS02880;Dbxref=GenBank:WP_000047544.1;Name=WP_000047544.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463318.1;locus_tag=C9E94_RS02880;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_000047544.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	7934	8380	.	+	.	ID=gene-C9E94_RS02885;Name=C9E94_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02885;old_locus_tag=C9E94_02960
NZ_PYJR01000031.1	Protein Homology	CDS	7934	8380	.	+	0	ID=cds-WP_135400802.1;Parent=gene-C9E94_RS02885;Dbxref=GenBank:WP_135400802.1;Name=WP_135400802.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463317.1;locus_tag=C9E94_RS02885;product=transposase;protein_id=WP_135400802.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	8496	11204	.	-	.	ID=gene-C9E94_RS02890;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=C9E94_RS02890;old_locus_tag=C9E94_02965
NZ_PYJR01000031.1	Protein Homology	CDS	8496	11204	.	-	0	ID=cds-WP_135400803.1;Parent=gene-C9E94_RS02890;Dbxref=GenBank:WP_135400803.1;Name=WP_135400803.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=C9E94_RS02890;product=magnesium-translocating P-type ATPase;protein_id=WP_135400803.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	11345	11443	.	-	.	ID=gene-C9E94_RS23775;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=C9E94_RS23775
NZ_PYJR01000031.1	Protein Homology	CDS	11345	11443	.	-	0	ID=cds-WP_105789234.1;Parent=gene-C9E94_RS23775;Dbxref=GenBank:WP_105789234.1;Name=WP_105789234.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: protein motif:HMM:NF028369.6;locus_tag=C9E94_RS23775;product=mgtA regulatory leader peptide MgtL;protein_id=WP_105789234.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	11588	12535	.	+	.	ID=gene-C9E94_RS02900;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=C9E94_RS02900;old_locus_tag=C9E94_02970
NZ_PYJR01000031.1	Protein Homology	CDS	11588	12535	.	+	0	ID=cds-WP_001621944.1;Parent=gene-C9E94_RS02900;Dbxref=GenBank:WP_001621944.1;Name=WP_001621944.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463315.1;locus_tag=C9E94_RS02900;product=trehalose operon repressor TreR;protein_id=WP_001621944.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	12673	14091	.	+	.	ID=gene-C9E94_RS02905;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=C9E94_RS02905;old_locus_tag=C9E94_02975
NZ_PYJR01000031.1	Protein Homology	CDS	12673	14091	.	+	0	ID=cds-WP_000048828.1;Parent=gene-C9E94_RS02905;Dbxref=GenBank:WP_000048828.1;Name=WP_000048828.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224799.1;locus_tag=C9E94_RS02905;product=PTS trehalose transporter subunit IIBC;protein_id=WP_000048828.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	14141	15793	.	+	.	ID=gene-C9E94_RS02910;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=C9E94_RS02910;old_locus_tag=C9E94_02980
NZ_PYJR01000031.1	Protein Homology	CDS	14141	15793	.	+	0	ID=cds-WP_000155049.1;Parent=gene-C9E94_RS02910;Dbxref=GenBank:WP_000155049.1;Name=WP_000155049.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463314.1;locus_tag=C9E94_RS02910;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_000155049.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	16202	18340	.	+	.	ID=gene-C9E94_RS02915;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=C9E94_RS02915;old_locus_tag=C9E94_02985
NZ_PYJR01000031.1	Protein Homology	CDS	16202	18340	.	+	0	ID=cds-WP_000187818.1;Parent=gene-C9E94_RS02915;Dbxref=GenBank:WP_000187818.1;Name=WP_000187818.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463313.1;locus_tag=C9E94_RS02915;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_000187818.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	18557	19021	.	+	.	ID=gene-C9E94_RS02920;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=C9E94_RS02920;old_locus_tag=C9E94_02990
NZ_PYJR01000031.1	Protein Homology	CDS	18557	19021	.	+	0	ID=cds-WP_001009173.1;Parent=gene-C9E94_RS02920;Dbxref=GenBank:WP_001009173.1;Name=WP_001009173.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=C9E94_RS02920;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_001009173.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	19025	19309	.	-	.	ID=gene-C9E94_RS02925;Name=C9E94_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02925;old_locus_tag=C9E94_02995
NZ_PYJR01000031.1	Protein Homology	CDS	19025	19309	.	-	0	ID=cds-WP_000220575.1;Parent=gene-C9E94_RS02925;Dbxref=GenBank:WP_000220575.1;Name=WP_000220575.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463311.1;locus_tag=C9E94_RS02925;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_000220575.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	19299	19541	.	-	.	ID=gene-C9E94_RS02930;Name=C9E94_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02930;old_locus_tag=C9E94_03000
NZ_PYJR01000031.1	Protein Homology	CDS	19299	19541	.	-	0	ID=cds-WP_000212724.1;Parent=gene-C9E94_RS02930;Dbxref=GenBank:WP_000212724.1;Name=WP_000212724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463310.1;locus_tag=C9E94_RS02930;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_000212724.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	19619	21532	.	-	.	ID=gene-C9E94_RS02935;Name=C9E94_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02935;old_locus_tag=C9E94_03005
NZ_PYJR01000031.1	Protein Homology	CDS	19619	21532	.	-	0	ID=cds-WP_167853639.1;Parent=gene-C9E94_RS02935;Dbxref=GenBank:WP_167853639.1;Name=WP_167853639.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463309.1;locus_tag=C9E94_RS02935;product=BglG family transcription antiterminator;protein_id=WP_167853639.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	21549	22289	.	-	.	ID=gene-C9E94_RS02940;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=C9E94_RS02940;old_locus_tag=C9E94_03010
NZ_PYJR01000031.1	Protein Homology	CDS	21549	22289	.	-	0	ID=cds-WP_000779263.1;Parent=gene-C9E94_RS02940;Dbxref=GenBank:WP_000779263.1;Name=WP_000779263.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463308.2;locus_tag=C9E94_RS02940;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000779263.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	22286	23404	.	-	.	ID=gene-C9E94_RS02945;Name=C9E94_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02945;old_locus_tag=C9E94_03015
NZ_PYJR01000031.1	Protein Homology	CDS	22286	23404	.	-	0	ID=cds-WP_001139183.1;Parent=gene-C9E94_RS02945;Dbxref=GenBank:WP_001139183.1;Name=WP_001139183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463307.1;locus_tag=C9E94_RS02945;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WP_001139183.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	23388	24521	.	-	.	ID=gene-C9E94_RS02950;Name=C9E94_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02950;old_locus_tag=C9E94_03020
NZ_PYJR01000031.1	Protein Homology	CDS	23388	24521	.	-	0	ID=cds-WP_023257225.1;Parent=gene-C9E94_RS02950;Dbxref=GenBank:WP_023257225.1;Name=WP_023257225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463306.1;locus_tag=C9E94_RS02950;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WP_023257225.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	24580	25224	.	-	.	ID=gene-C9E94_RS02955;Name=C9E94_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02955;old_locus_tag=C9E94_03025
NZ_PYJR01000031.1	Protein Homology	CDS	24580	25224	.	-	0	ID=cds-WP_000392128.1;Parent=gene-C9E94_RS02955;Dbxref=GenBank:WP_000392128.1;Name=WP_000392128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463305.1;locus_tag=C9E94_RS02955;product=DUF4310 family protein;protein_id=WP_000392128.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	25236	26012	.	-	.	ID=gene-C9E94_RS02960;Name=C9E94_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02960;old_locus_tag=C9E94_03030
NZ_PYJR01000031.1	Protein Homology	CDS	25236	26012	.	-	0	ID=cds-WP_000478571.1;Parent=gene-C9E94_RS02960;Dbxref=GenBank:WP_000478571.1;Name=WP_000478571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463304.1;locus_tag=C9E94_RS02960;product=DUF4311 domain-containing protein;protein_id=WP_000478571.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	26035	26337	.	-	.	ID=gene-C9E94_RS02965;Name=C9E94_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02965;old_locus_tag=C9E94_03035
NZ_PYJR01000031.1	Protein Homology	CDS	26035	26337	.	-	0	ID=cds-WP_000975187.1;Parent=gene-C9E94_RS02965;Dbxref=GenBank:WP_000975187.1;Name=WP_000975187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463303.1;locus_tag=C9E94_RS02965;product=DUF4312 family protein;protein_id=WP_000975187.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	26337	26699	.	-	.	ID=gene-C9E94_RS02970;Name=C9E94_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02970;old_locus_tag=C9E94_03040
NZ_PYJR01000031.1	Protein Homology	CDS	26337	26699	.	-	0	ID=cds-WP_135400805.1;Parent=gene-C9E94_RS02970;Dbxref=GenBank:WP_135400805.1;Name=WP_135400805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463302.1;locus_tag=C9E94_RS02970;product=SFCGS family glycine-rich protein;protein_id=WP_135400805.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	26710	27048	.	-	.	ID=gene-C9E94_RS02975;Name=C9E94_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02975;old_locus_tag=C9E94_03045
NZ_PYJR01000031.1	Protein Homology	CDS	26710	27048	.	-	0	ID=cds-WP_001255104.1;Parent=gene-C9E94_RS02975;Dbxref=GenBank:WP_001255104.1;Name=WP_001255104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463301.1;locus_tag=C9E94_RS02975;product=glycine dehydrogenase;protein_id=WP_001255104.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	27336	27722	.	-	.	ID=gene-C9E94_RS02980;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=C9E94_RS02980;old_locus_tag=C9E94_03050
NZ_PYJR01000031.1	Protein Homology	CDS	27336	27722	.	-	0	ID=cds-WP_001232231.1;Parent=gene-C9E94_RS02980;Dbxref=GenBank:WP_001232231.1;Name=WP_001232231.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463300.1;locus_tag=C9E94_RS02980;product=cytochrome b562;protein_id=WP_001232231.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	27821	29173	.	-	.	ID=gene-C9E94_RS02985;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=C9E94_RS02985;old_locus_tag=C9E94_03055
NZ_PYJR01000031.1	Protein Homology	CDS	27821	29173	.	-	0	ID=cds-WP_058805577.1;Parent=gene-C9E94_RS02985;Dbxref=GenBank:WP_058805577.1;Name=WP_058805577.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463299.1;locus_tag=C9E94_RS02985;product=metalloprotease PmbA;protein_id=WP_058805577.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	29269	29820	.	+	.	ID=gene-C9E94_RS02990;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=C9E94_RS02990;old_locus_tag=C9E94_03060
NZ_PYJR01000031.1	Protein Homology	CDS	29269	29820	.	+	0	ID=cds-WP_000166287.1;Parent=gene-C9E94_RS02990;Dbxref=GenBank:WP_000166287.1;Name=WP_000166287.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463298.1;locus_tag=C9E94_RS02990;product=ribosome biogenesis factor YjgA;protein_id=WP_000166287.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	29927	31300	.	-	.	ID=gene-C9E94_RS02995;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=C9E94_RS02995;old_locus_tag=C9E94_03065
NZ_PYJR01000031.1	Protein Homology	CDS	29927	31300	.	-	0	ID=cds-WP_001219832.1;Parent=gene-C9E94_RS02995;Dbxref=GenBank:WP_001219832.1;Name=WP_001219832.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001219850.1;locus_tag=C9E94_RS02995;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_001219832.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	31475	32473	.	+	.	ID=gene-C9E94_RS03000;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=C9E94_RS03000;old_locus_tag=C9E94_03070
NZ_PYJR01000031.1	Protein Homology	CDS	31475	32473	.	+	0	ID=cds-WP_000853764.1;Parent=gene-C9E94_RS03000;Dbxref=GenBank:WP_000853764.1;Name=WP_000853764.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=C9E94_RS03000;product=class 1 fructose-bisphosphatase;protein_id=WP_000853764.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	32700	33230	.	+	.	ID=gene-C9E94_RS03005;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=C9E94_RS03005;old_locus_tag=C9E94_03075
NZ_PYJR01000031.1	Protein Homology	CDS	32700	33230	.	+	0	ID=cds-WP_000055079.1;Parent=gene-C9E94_RS03005;Dbxref=GenBank:WP_000055079.1;Name=WP_000055079.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=C9E94_RS03005;product=inorganic diphosphatase;protein_id=WP_000055079.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	33640	34803	.	+	.	ID=gene-C9E94_RS03010;Name=C9E94_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03010;old_locus_tag=C9E94_03080
NZ_PYJR01000031.1	Protein Homology	CDS	33640	34803	.	+	0	ID=cds-WP_023201876.1;Parent=gene-C9E94_RS03010;Dbxref=GenBank:WP_023201876.1;Name=WP_023201876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463274.1;locus_tag=C9E94_RS03010;product=metallo-dependent hydrolase;protein_id=WP_023201876.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	34800	36008	.	+	.	ID=gene-C9E94_RS03015;Name=C9E94_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03015;old_locus_tag=C9E94_03085
NZ_PYJR01000031.1	Protein Homology	CDS	34800	36008	.	+	0	ID=cds-WP_064047083.1;Parent=gene-C9E94_RS03015;Dbxref=GenBank:WP_064047083.1;Name=WP_064047083.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000200805.1;locus_tag=C9E94_RS03015;product=MFS transporter;protein_id=WP_064047083.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	36062	36406	.	-	.	ID=gene-C9E94_RS03020;Name=C9E94_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03020;old_locus_tag=C9E94_03090
NZ_PYJR01000031.1	Protein Homology	CDS	36062	36406	.	-	0	ID=cds-WP_001219167.1;Parent=gene-C9E94_RS03020;Dbxref=GenBank:WP_001219167.1;Name=WP_001219167.1;Ontology_term=GO:0061929;gbkey=CDS;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463272.1;locus_tag=C9E94_RS03020;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_001219167.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	36409	40188	.	-	.	ID=gene-C9E94_RS03025;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=C9E94_RS03025;old_locus_tag=C9E94_03095
NZ_PYJR01000031.1	Protein Homology	CDS	36409	40188	.	-	0	ID=cds-WP_000060827.1;Parent=gene-C9E94_RS03025;Dbxref=GenBank:WP_000060827.1;Name=WP_000060827.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=C9E94_RS03025;product=autotransporter assembly complex protein TamB;protein_id=WP_000060827.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	40185	41918	.	-	.	ID=gene-C9E94_RS03030;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=C9E94_RS03030;old_locus_tag=C9E94_03100
NZ_PYJR01000031.1	Protein Homology	CDS	40185	41918	.	-	0	ID=cds-WP_001120235.1;Parent=gene-C9E94_RS03030;Dbxref=GenBank:WP_001120235.1;Name=WP_001120235.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463270.1;locus_tag=C9E94_RS03030;product=autotransporter assembly complex protein TamA;protein_id=WP_001120235.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	42131	42769	.	+	.	ID=gene-C9E94_RS03035;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=C9E94_RS03035;old_locus_tag=C9E94_03105
NZ_PYJR01000031.1	Protein Homology	CDS	42131	42769	.	+	0	ID=cds-WP_000051467.1;Parent=gene-C9E94_RS03035;Dbxref=GenBank:WP_000051467.1;Name=WP_000051467.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463269.1;locus_tag=C9E94_RS03035;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_000051467.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	42952	44295	.	+	.	ID=gene-C9E94_RS03040;Name=C9E94_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03040;old_locus_tag=C9E94_03110
NZ_PYJR01000031.1	Protein Homology	CDS	42952	44295	.	+	0	ID=cds-WP_000934974.1;Parent=gene-C9E94_RS03040;Dbxref=GenBank:WP_000934974.1;Name=WP_000934974.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463268.1;locus_tag=C9E94_RS03040;product=hemolysin family protein;protein_id=WP_000934974.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	44380	44586	.	-	.	ID=gene-C9E94_RS03045;Name=C9E94_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03045;old_locus_tag=C9E94_03115
NZ_PYJR01000031.1	Protein Homology	CDS	44380	44586	.	-	0	ID=cds-WP_000689229.1;Parent=gene-C9E94_RS03045;Dbxref=GenBank:WP_000689229.1;Name=WP_000689229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=C9E94_RS03045;product=DUF1107 domain-containing protein;protein_id=WP_000689229.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	44913	45470	.	+	.	ID=gene-C9E94_RS03055;Name=C9E94_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03055;old_locus_tag=C9E94_03125
NZ_PYJR01000031.1	Protein Homology	CDS	44913	45470	.	+	0	ID=cds-WP_000175300.1;Parent=gene-C9E94_RS03055;Dbxref=GenBank:WP_000175300.1;Name=WP_000175300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463266.1;locus_tag=C9E94_RS03055;product=YtfJ family protein;protein_id=WP_000175300.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	45460	46200	.	-	.	ID=gene-C9E94_RS03060;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=C9E94_RS03060;old_locus_tag=C9E94_03130
NZ_PYJR01000031.1	Protein Homology	CDS	45460	46200	.	-	0	ID=cds-WP_000893398.1;Parent=gene-C9E94_RS03060;Dbxref=GenBank:WP_000893398.1;Name=WP_000893398.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=C9E94_RS03060;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000893398.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	46468	48411	.	+	.	ID=gene-C9E94_RS03070;Name=C9E94_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03070;old_locus_tag=C9E94_03140
NZ_PYJR01000031.1	Protein Homology	CDS	46468	48411	.	+	0	ID=cds-WP_000589386.1;Parent=gene-C9E94_RS03070;Dbxref=GenBank:WP_000589386.1;Name=WP_000589386.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463264.1;locus_tag=C9E94_RS03070;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_000589386.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	48469	48855	.	-	.	ID=gene-C9E94_RS03075;Name=C9E94_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03075;old_locus_tag=C9E94_03145
NZ_PYJR01000031.1	Protein Homology	CDS	48469	48855	.	-	0	ID=cds-WP_001201294.1;Parent=gene-C9E94_RS03075;Dbxref=GenBank:WP_001201294.1;Name=WP_001201294.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463263.1;locus_tag=C9E94_RS03075;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_001201294.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	48943	49791	.	+	.	ID=gene-C9E94_RS03080;Name=C9E94_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03080;old_locus_tag=C9E94_03150
NZ_PYJR01000031.1	Protein Homology	CDS	48943	49791	.	+	0	ID=cds-WP_079842652.1;Parent=gene-C9E94_RS03080;Dbxref=GenBank:WP_079842652.1;Name=WP_079842652.1;Ontology_term=GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463262.1;locus_tag=C9E94_RS03080;product=SDR family oxidoreductase;protein_id=WP_079842652.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	49872	50837	.	+	.	ID=gene-C9E94_RS03085;Name=C9E94_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03085;old_locus_tag=C9E94_03155
NZ_PYJR01000031.1	Protein Homology	CDS	49872	50837	.	+	0	ID=cds-WP_000623290.1;Parent=gene-C9E94_RS03085;Dbxref=GenBank:WP_000623290.1;Name=WP_000623290.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463261.1;locus_tag=C9E94_RS03085;product=DMT family transporter;protein_id=WP_000623290.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	50940	51602	.	+	.	ID=gene-C9E94_RS03090;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=C9E94_RS03090;old_locus_tag=C9E94_03160
NZ_PYJR01000031.1	Protein Homology	CDS	50940	51602	.	+	0	ID=cds-WP_000331471.1;Parent=gene-C9E94_RS03090;Dbxref=GenBank:WP_000331471.1;Name=WP_000331471.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463260.1;locus_tag=C9E94_RS03090;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_000331471.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	51714	53123	.	-	.	ID=gene-C9E94_RS03095;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=C9E94_RS03095;old_locus_tag=C9E94_03165
NZ_PYJR01000031.1	Protein Homology	CDS	51714	53123	.	-	0	ID=cds-WP_000228322.1;Parent=gene-C9E94_RS03095;Dbxref=GenBank:WP_000228322.1;Name=WP_000228322.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463259.1;locus_tag=C9E94_RS03095;product=D-serine/D-alanine/glycine transporter;protein_id=WP_000228322.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	53419	54039	.	-	.	ID=gene-C9E94_RS03100;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=C9E94_RS03100;old_locus_tag=C9E94_03170
NZ_PYJR01000031.1	Protein Homology	CDS	53419	54039	.	-	0	ID=cds-WP_000235161.1;Parent=gene-C9E94_RS03100;Dbxref=GenBank:WP_000235161.1;Name=WP_000235161.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=C9E94_RS03100;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000235161.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	54259	54894	.	+	.	ID=gene-C9E94_RS03105;Name=C9E94_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03105;old_locus_tag=C9E94_03180
NZ_PYJR01000031.1	Protein Homology	CDS	54259	54894	.	+	0	ID=cds-WP_001119446.1;Parent=gene-C9E94_RS03105;Dbxref=GenBank:WP_001119446.1;Name=WP_001119446.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463257.1;locus_tag=C9E94_RS03105;product=OapA family protein;protein_id=WP_001119446.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	54944	55870	.	-	.	ID=gene-C9E94_RS03110;Name=C9E94_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03110;old_locus_tag=C9E94_03185
NZ_PYJR01000031.1	Protein Homology	CDS	54944	55870	.	-	0	ID=cds-WP_000381070.1;Parent=gene-C9E94_RS03110;Dbxref=GenBank:WP_000381070.1;Name=WP_000381070.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463256.1;locus_tag=C9E94_RS03110;product=DMT family transporter;protein_id=WP_000381070.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	56018	56467	.	-	.	ID=gene-C9E94_RS03115;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=C9E94_RS03115;old_locus_tag=C9E94_03190
NZ_PYJR01000031.1	Protein Homology	CDS	56018	56467	.	-	0	ID=cds-WP_001196059.1;Parent=gene-C9E94_RS03115;Dbxref=GenBank:WP_001196059.1;Name=WP_001196059.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=C9E94_RS03115;product=50S ribosomal protein L9;protein_id=WP_001196059.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	56509	56736	.	-	.	ID=gene-C9E94_RS03120;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=C9E94_RS03120;old_locus_tag=C9E94_03195
NZ_PYJR01000031.1	Protein Homology	CDS	56509	56736	.	-	0	ID=cds-WP_000135199.1;Parent=gene-C9E94_RS03120;Dbxref=GenBank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=C9E94_RS03120;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	56741	57055	.	-	.	ID=gene-C9E94_RS03125;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=C9E94_RS03125;old_locus_tag=C9E94_03200
NZ_PYJR01000031.1	Protein Homology	CDS	56741	57055	.	-	0	ID=cds-WP_001519453.1;Parent=gene-C9E94_RS03125;Dbxref=GenBank:WP_001519453.1;Name=WP_001519453.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463253.1;locus_tag=C9E94_RS03125;product=primosomal replication protein N;protein_id=WP_001519453.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	57062	57457	.	-	.	ID=gene-C9E94_RS03130;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=C9E94_RS03130;old_locus_tag=C9E94_03205
NZ_PYJR01000031.1	Protein Homology	CDS	57062	57457	.	-	0	ID=cds-WP_001216673.1;Parent=gene-C9E94_RS03130;Dbxref=GenBank:WP_001216673.1;Name=WP_001216673.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=C9E94_RS03130;product=30S ribosomal protein S6;protein_id=WP_001216673.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	57844	58119	.	+	.	ID=gene-C9E94_RS03135;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=C9E94_RS03135;old_locus_tag=C9E94_03210
NZ_PYJR01000031.1	Protein Homology	CDS	57844	58119	.	+	0	ID=cds-WP_000466074.1;Parent=gene-C9E94_RS03135;Dbxref=GenBank:WP_000466074.1;Name=WP_000466074.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313202.1;locus_tag=C9E94_RS03135;product=DUF1471 family protein YjfY;protein_id=WP_000466074.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	58173	58730	.	-	.	ID=gene-C9E94_RS03140;Name=C9E94_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03140;old_locus_tag=C9E94_03215
NZ_PYJR01000031.1	Protein Homology	CDS	58173	58730	.	-	0	ID=cds-WP_000026294.1;Parent=gene-C9E94_RS03140;Dbxref=GenBank:WP_000026294.1;Name=WP_000026294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006911310.1;locus_tag=C9E94_RS03140;product=YagU family protein;protein_id=WP_000026294.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	58818	59504	.	-	.	ID=gene-C9E94_RS03145;Name=C9E94_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03145;old_locus_tag=C9E94_03220
NZ_PYJR01000031.1	Protein Homology	CDS	58818	59504	.	-	0	ID=cds-WP_001170770.1;Parent=gene-C9E94_RS03145;Dbxref=GenBank:WP_001170770.1;Name=WP_001170770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463249.1;locus_tag=C9E94_RS03145;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_001170770.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	59504	60358	.	-	.	ID=gene-C9E94_RS03150;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=C9E94_RS03150;old_locus_tag=C9E94_03225
NZ_PYJR01000031.1	Protein Homology	CDS	59504	60358	.	-	0	ID=cds-WP_000949530.1;Parent=gene-C9E94_RS03150;Dbxref=GenBank:WP_000949530.1;Name=WP_000949530.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463248.1;locus_tag=C9E94_RS03150;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WP_000949530.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	60368	61018	.	-	.	ID=gene-C9E94_RS03155;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=C9E94_RS03155;old_locus_tag=C9E94_03230
NZ_PYJR01000031.1	Protein Homology	CDS	60368	61018	.	-	0	ID=cds-WP_000056761.1;Parent=gene-C9E94_RS03155;Dbxref=GenBank:WP_000056761.1;Name=WP_000056761.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463247.1;locus_tag=C9E94_RS03155;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000056761.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	61032	61496	.	-	.	ID=gene-C9E94_RS03160;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=C9E94_RS03160;old_locus_tag=C9E94_03235
NZ_PYJR01000031.1	Protein Homology	CDS	61032	61496	.	-	0	ID=cds-WP_000776531.1;Parent=gene-C9E94_RS03160;Dbxref=GenBank:WP_000776531.1;Name=WP_000776531.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463246.1;locus_tag=C9E94_RS03160;product=PTS ascorbate transporter subunit IIA;protein_id=WP_000776531.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	61506	61811	.	-	.	ID=gene-C9E94_RS03165;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=C9E94_RS03165;old_locus_tag=C9E94_03240
NZ_PYJR01000031.1	Protein Homology	CDS	61506	61811	.	-	0	ID=cds-WP_000218358.1;Parent=gene-C9E94_RS03165;Dbxref=GenBank:WP_000218358.1;Name=WP_000218358.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463245.1;locus_tag=C9E94_RS03165;product=PTS ascorbate transporter subunit IIB;protein_id=WP_000218358.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	61827	63224	.	-	.	ID=gene-C9E94_RS03170;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=C9E94_RS03170;old_locus_tag=C9E94_03245
NZ_PYJR01000031.1	Protein Homology	CDS	61827	63224	.	-	0	ID=cds-WP_000404873.1;Parent=gene-C9E94_RS03170;Dbxref=GenBank:WP_000404873.1;Name=WP_000404873.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=C9E94_RS03170;product=PTS ascorbate transporter subunit IIC;protein_id=WP_000404873.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	63587	64651	.	+	.	ID=gene-C9E94_RS03175;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=C9E94_RS03175;old_locus_tag=C9E94_03250
NZ_PYJR01000031.1	Protein Homology	CDS	63587	64651	.	+	0	ID=cds-WP_000049161.1;Parent=gene-C9E94_RS03175;Dbxref=GenBank:WP_000049161.1;Name=WP_000049161.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=C9E94_RS03175;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_000049161.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	64756	65511	.	+	.	ID=gene-C9E94_RS03180;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=C9E94_RS03180;old_locus_tag=C9E94_03255
NZ_PYJR01000031.1	Protein Homology	CDS	64756	65511	.	+	0	ID=cds-WP_000133618.1;Parent=gene-C9E94_RS03180;Dbxref=GenBank:WP_000133618.1;Name=WP_000133618.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463242.1;locus_tag=C9E94_RS03180;product=HTH-type transcriptional regulator UlaR;protein_id=WP_000133618.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	65508	66257	.	-	.	ID=gene-C9E94_RS03185;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=C9E94_RS03185;old_locus_tag=C9E94_03260
NZ_PYJR01000031.1	Protein Homology	CDS	65508	66257	.	-	0	ID=cds-WP_135400806.1;Parent=gene-C9E94_RS03185;Dbxref=GenBank:WP_135400806.1;Name=WP_135400806.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463241.1;locus_tag=C9E94_RS03185;product=esterase;protein_id=WP_135400806.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	66441	66770	.	+	.	ID=gene-C9E94_RS03190;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=C9E94_RS03190;old_locus_tag=C9E94_03265
NZ_PYJR01000031.1	Protein Homology	CDS	66441	66770	.	+	0	ID=cds-WP_000586836.1;Parent=gene-C9E94_RS03190;Dbxref=GenBank:WP_000586836.1;Name=WP_000586836.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463240.1;locus_tag=C9E94_RS03190;product=biofilm peroxide resistance protein BsmA;protein_id=WP_000586836.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	66901	67176	.	+	.	ID=gene-C9E94_RS03195;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=C9E94_RS03195;old_locus_tag=C9E94_03270
NZ_PYJR01000031.1	Protein Homology	CDS	66901	67176	.	+	0	ID=cds-WP_001518964.1;Parent=gene-C9E94_RS03195;Dbxref=GenBank:WP_001518964.1;Name=WP_001518964.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134428.1;locus_tag=C9E94_RS03195;product=DUF1471 family protease activator YjfN;protein_id=WP_001518964.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	67221	68843	.	-	.	ID=gene-C9E94_RS03200;Name=C9E94_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03200;old_locus_tag=C9E94_03275
NZ_PYJR01000031.1	Protein Homology	CDS	67221	68843	.	-	0	ID=cds-WP_000118980.1;Parent=gene-C9E94_RS03200;Dbxref=GenBank:WP_000118980.1;Name=WP_000118980.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463238.3;locus_tag=C9E94_RS03200;product=isovaleryl-CoA dehydrogenase;protein_id=WP_000118980.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	68928	70091	.	-	.	ID=gene-C9E94_RS03205;Name=C9E94_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03205;old_locus_tag=C9E94_03280
NZ_PYJR01000031.1	Protein Homology	CDS	68928	70091	.	-	0	ID=cds-WP_000943930.1;Parent=gene-C9E94_RS03205;Dbxref=GenBank:WP_000943930.1;Name=WP_000943930.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463237.1;locus_tag=C9E94_RS03205;product=glutathionylspermidine synthase family protein;protein_id=WP_000943930.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	70094	70732	.	-	.	ID=gene-C9E94_RS03210;Name=C9E94_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03210;old_locus_tag=C9E94_03285
NZ_PYJR01000031.1	Protein Homology	CDS	70094	70732	.	-	0	ID=cds-WP_001085598.1;Parent=gene-C9E94_RS03210;Dbxref=GenBank:WP_001085598.1;Name=WP_001085598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463236.1;locus_tag=C9E94_RS03210;product=DUF1190 domain-containing protein;protein_id=WP_001085598.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	70742	71140	.	-	.	ID=gene-C9E94_RS03215;Name=C9E94_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03215;old_locus_tag=C9E94_03290
NZ_PYJR01000031.1	Protein Homology	CDS	70742	71140	.	-	0	ID=cds-WP_000547737.1;Parent=gene-C9E94_RS03215;Dbxref=GenBank:WP_000547737.1;Name=WP_000547737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463235.1;locus_tag=C9E94_RS03215;product=DUF350 domain-containing protein;protein_id=WP_000547737.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	71158	71841	.	-	.	ID=gene-C9E94_RS03220;Name=C9E94_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03220;old_locus_tag=C9E94_03295
NZ_PYJR01000031.1	Protein Homology	CDS	71158	71841	.	-	0	ID=cds-WP_000090294.1;Parent=gene-C9E94_RS03220;Dbxref=GenBank:WP_000090294.1;Name=WP_000090294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463234.3;locus_tag=C9E94_RS03220;product=YjfK family protein;protein_id=WP_000090294.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	pseudogene	71964	72065	.	-	.	ID=gene-C9E94_RS23570;Name=C9E94_RS23570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23570;partial=true;pseudo=true;start_range=.,71964
NZ_PYJR01000031.1	Protein Homology	CDS	71964	72065	.	-	0	ID=cds-C9E94_RS23570;Parent=gene-C9E94_RS23570;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463233.1;locus_tag=C9E94_RS23570;partial=true;product=hypothetical protein;pseudo=true;start_range=.,71964;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	72065	72763	.	-	.	ID=gene-C9E94_RS03225;Name=C9E94_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03225;old_locus_tag=C9E94_03300
NZ_PYJR01000031.1	Protein Homology	CDS	72065	72763	.	-	0	ID=cds-WP_000511981.1;Parent=gene-C9E94_RS03225;Dbxref=GenBank:WP_000511981.1;Name=WP_000511981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463232.1;locus_tag=C9E94_RS03225;product=PspA/IM30 family protein;protein_id=WP_000511981.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	72778	73182	.	-	.	ID=gene-C9E94_RS03230;Name=C9E94_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03230;old_locus_tag=C9E94_03305
NZ_PYJR01000031.1	Protein Homology	CDS	72778	73182	.	-	0	ID=cds-WP_000312605.1;Parent=gene-C9E94_RS03230;Dbxref=GenBank:WP_000312605.1;Name=WP_000312605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463231.1;locus_tag=C9E94_RS03230;product=YjfI family protein;protein_id=WP_000312605.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	73314	74045	.	-	.	ID=gene-C9E94_RS03235;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=C9E94_RS03235;old_locus_tag=C9E94_03310
NZ_PYJR01000031.1	Protein Homology	CDS	73314	74045	.	-	0	ID=cds-WP_001293277.1;Parent=gene-C9E94_RS03235;Dbxref=GenBank:WP_001293277.1;Name=WP_001293277.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463230.1;locus_tag=C9E94_RS03235;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_001293277.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	74136	76574	.	-	.	ID=gene-C9E94_RS03240;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=C9E94_RS03240;old_locus_tag=C9E94_03315
NZ_PYJR01000031.1	Protein Homology	CDS	74136	76574	.	-	0	ID=cds-WP_000076361.1;Parent=gene-C9E94_RS03240;Dbxref=GenBank:WP_000076361.1;Name=WP_000076361.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463229.1;locus_tag=C9E94_RS03240;product=ribonuclease R;protein_id=WP_000076361.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	76612	77037	.	-	.	ID=gene-C9E94_RS03245;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=C9E94_RS03245;old_locus_tag=C9E94_03320
NZ_PYJR01000031.1	Protein Homology	CDS	76612	77037	.	-	0	ID=cds-WP_001177632.1;Parent=gene-C9E94_RS03245;Dbxref=GenBank:WP_001177632.1;Name=WP_001177632.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=C9E94_RS03245;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_001177632.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	77257	78555	.	-	.	ID=gene-C9E94_RS03255;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=C9E94_RS03255;old_locus_tag=C9E94_03330
NZ_PYJR01000031.1	Protein Homology	CDS	77257	78555	.	-	0	ID=cds-WP_000527976.1;Parent=gene-C9E94_RS03255;Dbxref=GenBank:WP_000527976.1;Name=WP_000527976.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=C9E94_RS03255;product=adenylosuccinate synthase;protein_id=WP_000527976.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	78658	78855	.	-	.	ID=gene-C9E94_RS03260;Name=C9E94_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03260;old_locus_tag=C9E94_03335
NZ_PYJR01000031.1	Protein Homology	CDS	78658	78855	.	-	0	ID=cds-WP_001089290.1;Parent=gene-C9E94_RS03260;Dbxref=GenBank:WP_001089290.1;Name=WP_001089290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463226.1;locus_tag=C9E94_RS03260;product=DUF2065 domain-containing protein;protein_id=WP_001089290.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	78934	79938	.	-	.	ID=gene-C9E94_RS03265;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=C9E94_RS03265;old_locus_tag=C9E94_03340
NZ_PYJR01000031.1	Protein Homology	CDS	78934	79938	.	-	0	ID=cds-WP_001232417.1;Parent=gene-C9E94_RS03265;Dbxref=GenBank:WP_001232417.1;Name=WP_001232417.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463225.1;locus_tag=C9E94_RS03265;product=protease modulator HflC;protein_id=WP_001232417.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	79941	81200	.	-	.	ID=gene-C9E94_RS03270;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=C9E94_RS03270;old_locus_tag=C9E94_03345
NZ_PYJR01000031.1	Protein Homology	CDS	79941	81200	.	-	0	ID=cds-WP_000312505.1;Parent=gene-C9E94_RS03270;Dbxref=GenBank:WP_000312505.1;Name=WP_000312505.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463224.1;locus_tag=C9E94_RS03270;product=FtsH protease activity modulator HflK;protein_id=WP_000312505.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	81415	82695	.	-	.	ID=gene-C9E94_RS03275;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=C9E94_RS03275;old_locus_tag=C9E94_03350
NZ_PYJR01000031.1	Protein Homology	CDS	81415	82695	.	-	0	ID=cds-WP_000460338.1;Parent=gene-C9E94_RS03275;Dbxref=GenBank:WP_000460338.1;Name=WP_000460338.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463223.1;locus_tag=C9E94_RS03275;product=ribosome rescue GTPase HflX;protein_id=WP_000460338.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	82767	83075	.	-	.	ID=gene-C9E94_RS03280;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=C9E94_RS03280;old_locus_tag=C9E94_03355
NZ_PYJR01000031.1	Protein Homology	CDS	82767	83075	.	-	0	ID=cds-WP_001051875.1;Parent=gene-C9E94_RS03280;Dbxref=GenBank:WP_001051875.1;Name=WP_001051875.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463222.1;locus_tag=C9E94_RS03280;product=RNA chaperone Hfq;protein_id=WP_001051875.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	83158	84108	.	-	.	ID=gene-C9E94_RS03285;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=C9E94_RS03285;old_locus_tag=C9E94_03360
NZ_PYJR01000031.1	Protein Homology	CDS	83158	84108	.	-	0	ID=cds-WP_001000734.1;Parent=gene-C9E94_RS03285;Dbxref=GenBank:WP_001000734.1;Name=WP_001000734.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463221.1;locus_tag=C9E94_RS03285;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001000734.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	84101	85957	.	-	.	ID=gene-C9E94_RS03290;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=C9E94_RS03290;old_locus_tag=C9E94_03365
NZ_PYJR01000031.1	Protein Homology	CDS	84101	85957	.	-	0	ID=cds-WP_001122550.1;Parent=gene-C9E94_RS03290;Dbxref=GenBank:WP_001122550.1;Name=WP_001122550.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463220.1;locus_tag=C9E94_RS03290;product=DNA mismatch repair endonuclease MutL;protein_id=WP_001122550.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	85967	87286	.	-	.	ID=gene-C9E94_RS03295;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=C9E94_RS03295;old_locus_tag=C9E94_03370
NZ_PYJR01000031.1	Protein Homology	CDS	85967	87286	.	-	0	ID=cds-WP_135400807.1;Parent=gene-C9E94_RS03295;Dbxref=GenBank:WP_135400807.1;Name=WP_135400807.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463219.1;locus_tag=C9E94_RS03295;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_135400807.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	87303	87764	.	-	.	ID=gene-C9E94_RS03300;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=C9E94_RS03300;old_locus_tag=C9E94_03375
NZ_PYJR01000031.1	Protein Homology	CDS	87303	87764	.	-	0	ID=cds-WP_000981984.1;Parent=gene-C9E94_RS03300;Dbxref=GenBank:WP_000981984.1;Name=WP_000981984.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463218.1;locus_tag=C9E94_RS03300;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_000981984.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	87736	89283	.	-	.	ID=gene-C9E94_RS03305;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=C9E94_RS03305;old_locus_tag=C9E94_03380
NZ_PYJR01000031.1	Protein Homology	CDS	87736	89283	.	-	0	ID=cds-WP_000968675.1;Parent=gene-C9E94_RS03305;Dbxref=GenBank:WP_000968675.1;Name=WP_000968675.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463217.1;locus_tag=C9E94_RS03305;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_000968675.1;transl_table=11
NZ_PYJR01000031.1	RefSeq	gene	89282	90421	.	+	.	ID=gene-C9E94_RS03310;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=C9E94_RS03310;old_locus_tag=C9E94_03385
NZ_PYJR01000031.1	Protein Homology	CDS	89282	90421	.	+	0	ID=cds-WP_023195971.1;Parent=gene-C9E94_RS03310;Dbxref=GenBank:WP_023195971.1;Name=WP_023195971.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=C9E94_RS03310;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_023195971.1;transl_table=11
##sequence-region NZ_PYJR01000006.1 1 232
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000006.1	RefSeq	region	1	232	.	+	.	ID=NZ_PYJR01000006.1:1..232;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
##sequence-region NZ_PYJR01000029.1 1 232
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000029.1	RefSeq	region	1	232	.	+	.	ID=NZ_PYJR01000029.1:1..232;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000029.1	RefSeq	gene	96	171	.	-	.	ID=gene-C9E94_RS02790;Name=C9E94_RS02790;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS02790;old_locus_tag=C9E94_02865
NZ_PYJR01000029.1	tRNAscan-SE	tRNA	96	171	.	-	.	ID=rna-C9E94_RS02790;Parent=gene-C9E94_RS02790;anticodon=(pos:complement(136..138));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS02790;product=tRNA-Thr
NZ_PYJR01000029.1	tRNAscan-SE	exon	96	171	.	-	.	ID=exon-C9E94_RS02790-1;Parent=rna-C9E94_RS02790;anticodon=(pos:complement(136..138));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS02790;product=tRNA-Thr
##sequence-region NZ_PYJR01000069.1 1 223
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000069.1	RefSeq	region	1	223	.	+	.	ID=NZ_PYJR01000069.1:1..223;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000069.1	RefSeq	gene	1	223	.	-	.	ID=gene-C9E94_RS09060;Name=C9E94_RS09060;end_range=223,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9E94_RS09060;old_locus_tag=C9E94_09270;partial=true;start_range=.,1
NZ_PYJR01000069.1	cmsearch	rRNA	1	223	.	-	.	ID=rna-C9E94_RS09060;Parent=gene-C9E94_RS09060;Dbxref=RFAM:RF02541;end_range=223,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS09060;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_PYJR01000069.1	cmsearch	exon	1	223	.	-	.	ID=exon-C9E94_RS09060-1;Parent=rna-C9E94_RS09060;Dbxref=RFAM:RF02541;end_range=223,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS09060;partial=true;product=23S ribosomal RNA;start_range=.,1
##sequence-region NZ_PYJR01000033.1 1 204
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000033.1	RefSeq	region	1	204	.	+	.	ID=NZ_PYJR01000033.1:1..204;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000033.1	RefSeq	gene	8	144	.	+	.	ID=gene-C9E94_RS03320;Name=C9E94_RS03320;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E94_RS03320;old_locus_tag=C9E94_03395
NZ_PYJR01000033.1	cmsearch	ncRNA	8	144	.	+	.	ID=rna-C9E94_RS03320;Parent=gene-C9E94_RS03320;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS03320;product=RtT sRNA
NZ_PYJR01000033.1	cmsearch	exon	8	144	.	+	.	ID=exon-C9E94_RS03320-1;Parent=rna-C9E94_RS03320;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS03320;product=RtT sRNA
##sequence-region NZ_PYJR01000032.1 1 203
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000032.1	RefSeq	region	1	203	.	+	.	ID=NZ_PYJR01000032.1:1..203;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
##sequence-region NZ_PYJR01000057.1 1 89300
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000057.1	RefSeq	region	1	89300	.	+	.	ID=NZ_PYJR01000057.1:1..89300;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000057.1	RefSeq	pseudogene	1	806	.	-	.	ID=gene-C9E94_RS07435;Name=C9E94_RS07435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS07435;old_locus_tag=C9E94_07615;partial=true;pseudo=true;start_range=.,1
NZ_PYJR01000057.1	Protein Homology	CDS	1	806	.	-	0	ID=cds-C9E94_RS07435;Parent=gene-C9E94_RS07435;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460513.1;locus_tag=C9E94_RS07435;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	1064	2071	.	+	.	ID=gene-C9E94_RS07440;Name=C9E94_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07440;old_locus_tag=C9E94_07620
NZ_PYJR01000057.1	Protein Homology	CDS	1064	2071	.	+	0	ID=cds-WP_000201080.1;Parent=gene-C9E94_RS07440;Dbxref=GenBank:WP_000201080.1;Name=WP_000201080.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460514.1;locus_tag=C9E94_RS07440;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000201080.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	2215	3666	.	+	.	ID=gene-C9E94_RS07445;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=C9E94_RS07445;old_locus_tag=C9E94_07625
NZ_PYJR01000057.1	Protein Homology	CDS	2215	3666	.	+	0	ID=cds-WP_001276631.1;Parent=gene-C9E94_RS07445;Dbxref=GenBank:WP_001276631.1;Name=WP_001276631.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460515.1;locus_tag=C9E94_RS07445;product=Na+/H+ antiporter NhaC;protein_id=WP_001276631.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	3679	4881	.	+	.	ID=gene-C9E94_RS07450;Name=C9E94_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07450;old_locus_tag=C9E94_07630
NZ_PYJR01000057.1	Protein Homology	CDS	3679	4881	.	+	0	ID=cds-WP_000347163.1;Parent=gene-C9E94_RS07450;Dbxref=GenBank:WP_000347163.1;Name=WP_000347163.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460516.1;locus_tag=C9E94_RS07450;product=MalY/PatB family protein;protein_id=WP_000347163.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	4994	7069	.	-	.	ID=gene-C9E94_RS07455;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=C9E94_RS07455;old_locus_tag=C9E94_07635
NZ_PYJR01000057.1	Protein Homology	CDS	4994	7069	.	-	0	ID=cds-WP_135400908.1;Parent=gene-C9E94_RS07455;Dbxref=GenBank:WP_135400908.1;Name=WP_135400908.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460517.1;locus_tag=C9E94_RS07455;product=glycogen debranching protein GlgX;protein_id=WP_135400908.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	7126	9654	.	-	.	ID=gene-C9E94_RS07460;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=C9E94_RS07460;old_locus_tag=C9E94_07640
NZ_PYJR01000057.1	Protein Homology	CDS	7126	9654	.	-	0	ID=cds-WP_135400909.1;Parent=gene-C9E94_RS07460;Dbxref=GenBank:WP_135400909.1;Name=WP_135400909.1;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=C9E94_RS07460;product=malto-oligosyltrehalose synthase;protein_id=WP_135400909.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	9651	11435	.	-	.	ID=gene-C9E94_RS07465;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=C9E94_RS07465;old_locus_tag=C9E94_07645
NZ_PYJR01000057.1	Protein Homology	CDS	9651	11435	.	-	0	ID=cds-WP_135400910.1;Parent=gene-C9E94_RS07465;Dbxref=GenBank:WP_135400910.1;Name=WP_135400910.1;Ontology_term=GO:0005992,GO:0033942;gbkey=CDS;gene=treZ;go_function=4-alpha-D-(1->4)-alpha-D-glucanotrehalose trehalohydrolase activity|0033942||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460519.1;locus_tag=C9E94_RS07465;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_135400910.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	11564	12349	.	-	.	ID=gene-C9E94_RS07470;Name=C9E94_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07470;old_locus_tag=C9E94_07650
NZ_PYJR01000057.1	Protein Homology	CDS	11564	12349	.	-	0	ID=cds-WP_000698599.1;Parent=gene-C9E94_RS07470;Dbxref=GenBank:WP_000698599.1;Name=WP_000698599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460520.1;locus_tag=C9E94_RS07470;product=OBAP family protein;protein_id=WP_000698599.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	12492	12821	.	-	.	ID=gene-C9E94_RS07475;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=C9E94_RS07475;old_locus_tag=C9E94_07655
NZ_PYJR01000057.1	Protein Homology	CDS	12492	12821	.	-	0	ID=cds-WP_001032161.1;Parent=gene-C9E94_RS07475;Dbxref=GenBank:WP_001032161.1;Name=WP_001032161.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460521.1;locus_tag=C9E94_RS07475;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001032161.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	13171	13602	.	-	.	ID=gene-C9E94_RS07480;Name=C9E94_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07480;old_locus_tag=C9E94_07660
NZ_PYJR01000057.1	Protein Homology	CDS	13171	13602	.	-	0	ID=cds-WP_000152297.1;Parent=gene-C9E94_RS07480;Dbxref=GenBank:WP_000152297.1;Name=WP_000152297.1;Ontology_term=GO:0006972,GO:0006979,GO:0033194,GO:0004601,GO:0051920,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=peroxidase activity|0004601||IEA,peroxiredoxin activity|0051920||IEA;go_process=hyperosmotic response|0006972||IEA,response to oxidative stress|0006979||IEA,response to hydroperoxide|0033194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460522.1;locus_tag=C9E94_RS07480;product=OsmC family protein;protein_id=WP_000152297.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	14113	14328	.	+	.	ID=gene-C9E94_RS07485;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=C9E94_RS07485;old_locus_tag=C9E94_07665
NZ_PYJR01000057.1	Protein Homology	CDS	14113	14328	.	+	0	ID=cds-WP_000495700.1;Parent=gene-C9E94_RS07485;Dbxref=GenBank:WP_000495700.1;Name=WP_000495700.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460523.1;locus_tag=C9E94_RS07485;product=biofilm-dependent modulation protein;protein_id=WP_000495700.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	14423	14566	.	+	.	ID=gene-C9E94_RS07490;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=C9E94_RS07490;old_locus_tag=C9E94_07670
NZ_PYJR01000057.1	Protein Homology	CDS	14423	14566	.	+	0	ID=cds-WP_000841559.1;Parent=gene-C9E94_RS07490;Dbxref=GenBank:WP_000841559.1;Name=WP_000841559.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460524.1;locus_tag=C9E94_RS07490;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841559.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	14743	16440	.	+	.	ID=gene-C9E94_RS07495;Name=C9E94_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07495;old_locus_tag=C9E94_07675
NZ_PYJR01000057.1	Protein Homology	CDS	14743	16440	.	+	0	ID=cds-WP_000450511.1;Parent=gene-C9E94_RS07495;Dbxref=GenBank:WP_000450511.1;Name=WP_000450511.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=C9E94_RS07495;product=NAD-dependent malic enzyme;protein_id=WP_000450511.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	16722	17732	.	+	.	ID=gene-C9E94_RS07500;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=C9E94_RS07500;old_locus_tag=C9E94_07680
NZ_PYJR01000057.1	Protein Homology	CDS	16722	17732	.	+	0	ID=cds-WP_000642447.1;Parent=gene-C9E94_RS07500;Dbxref=GenBank:WP_000642447.1;Name=WP_000642447.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460526.1;locus_tag=C9E94_RS07500;product=alcohol dehydrogenase AdhP;protein_id=WP_000642447.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	17823	18479	.	-	.	ID=gene-C9E94_RS07505;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=C9E94_RS07505;old_locus_tag=C9E94_07685
NZ_PYJR01000057.1	Protein Homology	CDS	17823	18479	.	-	0	ID=cds-WP_000045658.1;Parent=gene-C9E94_RS07505;Dbxref=GenBank:WP_000045658.1;Name=WP_000045658.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460527.1;locus_tag=C9E94_RS07505;product=formate dehydrogenase-N subunit gamma;protein_id=WP_000045658.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	18472	19356	.	-	.	ID=gene-C9E94_RS07510;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=C9E94_RS07510;old_locus_tag=C9E94_07690
NZ_PYJR01000057.1	Protein Homology	CDS	18472	19356	.	-	0	ID=cds-WP_000061599.1;Parent=gene-C9E94_RS07510;Dbxref=GenBank:WP_000061599.1;Name=WP_000061599.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460528.1;locus_tag=C9E94_RS07510;product=formate dehydrogenase subunit beta;protein_id=WP_000061599.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	19370	22417	.	-	.	ID=gene-C9E94_RS07515;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=C9E94_RS07515;old_locus_tag=C9E94_07695
NZ_PYJR01000057.1	Protein Homology	CDS	19370	22417	.	-	0	ID=cds-WP_077910775.1;Parent=gene-C9E94_RS07515;Dbxref=GenBank:WP_077910775.1;Name=WP_077910775.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=C9E94_RS07515;product=formate dehydrogenase-N subunit alpha;protein_id=WP_077910775.1;transl_except=(pos:complement(21830..21832)%2Caa:Sec);transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	22695	23576	.	+	.	ID=gene-C9E94_RS07520;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=C9E94_RS07520;old_locus_tag=C9E94_07700
NZ_PYJR01000057.1	Protein Homology	CDS	22695	23576	.	+	0	ID=cds-WP_000203799.1;Parent=gene-C9E94_RS07520;Dbxref=GenBank:WP_000203799.1;Name=WP_000203799.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203799.1;locus_tag=C9E94_RS07520;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WP_000203799.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	24101	25189	.	+	.	ID=gene-C9E94_RS07530;Name=ompD;gbkey=Gene;gene=ompD;gene_biotype=protein_coding;locus_tag=C9E94_RS07530;old_locus_tag=C9E94_07710
NZ_PYJR01000057.1	Protein Homology	CDS	24101	25189	.	+	0	ID=cds-WP_000769035.1;Parent=gene-C9E94_RS07530;Dbxref=GenBank:WP_000769035.1;Name=WP_000769035.1;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=C9E94_RS07530;product=porin OmpD;protein_id=WP_000769035.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	25333	25713	.	+	.	ID=gene-C9E94_RS07535;Name=C9E94_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07535;old_locus_tag=C9E94_07715
NZ_PYJR01000057.1	Protein Homology	CDS	25333	25713	.	+	0	ID=cds-WP_014343841.1;Parent=gene-C9E94_RS07535;Dbxref=GenBank:WP_014343841.1;Name=WP_014343841.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460532.3;locus_tag=C9E94_RS07535;product=GFA family protein;protein_id=WP_014343841.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	25738	27225	.	-	.	ID=gene-C9E94_RS07540;Name=smvA;gbkey=Gene;gene=smvA;gene_biotype=protein_coding;locus_tag=C9E94_RS07540;old_locus_tag=C9E94_07720
NZ_PYJR01000057.1	Protein Homology	CDS	25738	27225	.	-	0	ID=cds-WP_135400911.1;Parent=gene-C9E94_RS07540;Dbxref=GenBank:WP_135400911.1;Name=WP_135400911.1;gbkey=CDS;gene=smvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460533.1;locus_tag=C9E94_RS07540;product=methyl viologen efflux MFS transporter SmvA;protein_id=WP_135400911.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	27343	27921	.	+	.	ID=gene-C9E94_RS07545;Name=C9E94_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07545;old_locus_tag=C9E94_07725
NZ_PYJR01000057.1	Protein Homology	CDS	27343	27921	.	+	0	ID=cds-WP_000121044.1;Parent=gene-C9E94_RS07545;Dbxref=GenBank:WP_000121044.1;Name=WP_000121044.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460534.1;locus_tag=C9E94_RS07545;product=TetR family transcriptional regulator;protein_id=WP_000121044.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	28135	29523	.	+	.	ID=gene-C9E94_RS07550;Name=C9E94_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07550;old_locus_tag=C9E94_07730
NZ_PYJR01000057.1	Protein Homology	CDS	28135	29523	.	+	0	ID=cds-WP_135400912.1;Parent=gene-C9E94_RS07550;Dbxref=GenBank:WP_135400912.1;Name=WP_135400912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460535.1;locus_tag=C9E94_RS07550;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_135400912.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	29615	33355	.	+	.	ID=gene-C9E94_RS07555;Name=C9E94_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07555;old_locus_tag=C9E94_07735
NZ_PYJR01000057.1	Protein Homology	CDS	29615	33355	.	+	0	ID=cds-WP_000040396.1;Parent=gene-C9E94_RS07555;Dbxref=GenBank:WP_000040396.1;Name=WP_000040396.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=C9E94_RS07555;product=nitrate reductase subunit alpha;protein_id=WP_000040396.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	33352	34896	.	+	.	ID=gene-C9E94_RS07560;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=C9E94_RS07560;old_locus_tag=C9E94_07740
NZ_PYJR01000057.1	Protein Homology	CDS	33352	34896	.	+	0	ID=cds-WP_000702596.1;Parent=gene-C9E94_RS07560;Dbxref=GenBank:WP_000702596.1;Name=WP_000702596.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460537.1;locus_tag=C9E94_RS07560;product=nitrate reductase subunit beta;protein_id=WP_000702596.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	34896	35591	.	+	.	ID=gene-C9E94_RS07565;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=C9E94_RS07565;old_locus_tag=C9E94_07745
NZ_PYJR01000057.1	Protein Homology	CDS	34896	35591	.	+	0	ID=cds-WP_001166300.1;Parent=gene-C9E94_RS07565;Dbxref=GenBank:WP_001166300.1;Name=WP_001166300.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460538.1;locus_tag=C9E94_RS07565;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_001166300.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	35588	36268	.	+	.	ID=gene-C9E94_RS07570;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=C9E94_RS07570;old_locus_tag=C9E94_07750
NZ_PYJR01000057.1	Protein Homology	CDS	35588	36268	.	+	0	ID=cds-WP_000617106.1;Parent=gene-C9E94_RS07570;Dbxref=GenBank:WP_000617106.1;Name=WP_000617106.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460539.1;locus_tag=C9E94_RS07570;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000617106.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	36374	37267	.	+	.	ID=gene-C9E94_RS07575;Name=C9E94_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07575;old_locus_tag=C9E94_07755
NZ_PYJR01000057.1	Protein Homology	CDS	36374	37267	.	+	0	ID=cds-WP_000804298.1;Parent=gene-C9E94_RS07575;Dbxref=GenBank:WP_000804298.1;Name=WP_000804298.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460540.1;locus_tag=C9E94_RS07575;product=PhzF family isomerase;protein_id=WP_000804298.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	37303	38148	.	-	.	ID=gene-C9E94_RS07580;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=C9E94_RS07580;old_locus_tag=C9E94_07760
NZ_PYJR01000057.1	Protein Homology	CDS	37303	38148	.	-	0	ID=cds-WP_000200329.1;Parent=gene-C9E94_RS07580;Dbxref=GenBank:WP_000200329.1;Name=WP_000200329.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460541.1;locus_tag=C9E94_RS07580;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_000200329.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	38431	39063	.	-	.	ID=gene-C9E94_RS07585;Name=steA;gbkey=Gene;gene=steA;gene_biotype=protein_coding;locus_tag=C9E94_RS07585;old_locus_tag=C9E94_07765
NZ_PYJR01000057.1	Protein Homology	CDS	38431	39063	.	-	0	ID=cds-WP_001147138.1;Parent=gene-C9E94_RS07585;Dbxref=GenBank:WP_001147138.1;Name=WP_001147138.1;gbkey=CDS;gene=steA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460542.1;locus_tag=C9E94_RS07585;product=type III secretion system effector SteA;protein_id=WP_001147138.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	39576	41069	.	+	.	ID=gene-C9E94_RS07595;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=C9E94_RS07595;old_locus_tag=C9E94_07775
NZ_PYJR01000057.1	Protein Homology	CDS	39576	41069	.	+	0	ID=cds-WP_000857112.1;Parent=gene-C9E94_RS07595;Dbxref=GenBank:WP_000857112.1;Name=WP_000857112.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460543.1;locus_tag=C9E94_RS07595;product=L-asparagine permease;protein_id=WP_000857112.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	41146	41367	.	-	.	ID=gene-C9E94_RS07600;Name=C9E94_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07600;old_locus_tag=C9E94_07780
NZ_PYJR01000057.1	Protein Homology	CDS	41146	41367	.	-	0	ID=cds-WP_000732362.1;Parent=gene-C9E94_RS07600;Dbxref=GenBank:WP_000732362.1;Name=WP_000732362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460544.1;locus_tag=C9E94_RS07600;product=YgdI/YgdR family lipoprotein;protein_id=WP_000732362.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	41512	42573	.	-	.	ID=gene-C9E94_RS07605;Name=yncE;gbkey=Gene;gene=yncE;gene_biotype=protein_coding;locus_tag=C9E94_RS07605;old_locus_tag=C9E94_07785
NZ_PYJR01000057.1	Protein Homology	CDS	41512	42573	.	-	0	ID=cds-WP_023254360.1;Parent=gene-C9E94_RS07605;Dbxref=GenBank:WP_023254360.1;Name=WP_023254360.1;gbkey=CDS;gene=yncE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460545.1;locus_tag=C9E94_RS07605;product=7-bladed beta-propeller protein YncE;protein_id=WP_023254360.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	42837	44957	.	+	.	ID=gene-C9E94_RS07610;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=protein_coding;locus_tag=C9E94_RS07610;old_locus_tag=C9E94_07790
NZ_PYJR01000057.1	Protein Homology	CDS	42837	44957	.	+	0	ID=cds-WP_135400913.1;Parent=gene-C9E94_RS07610;Dbxref=GenBank:WP_135400913.1;Name=WP_135400913.1;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460546.1;locus_tag=C9E94_RS07610;product=TonB-dependent receptor PqqU;protein_id=WP_135400913.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	45013	45678	.	-	.	ID=gene-C9E94_RS07615;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=C9E94_RS07615;old_locus_tag=C9E94_07795
NZ_PYJR01000057.1	Protein Homology	CDS	45013	45678	.	-	0	ID=cds-WP_001119592.1;Parent=gene-C9E94_RS07615;Dbxref=GenBank:WP_001119592.1;Name=WP_001119592.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460547.1;locus_tag=C9E94_RS07615;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=WP_001119592.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	46012	47049	.	-	.	ID=gene-C9E94_RS07620;Name=C9E94_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07620;old_locus_tag=C9E94_07800
NZ_PYJR01000057.1	Protein Homology	CDS	46012	47049	.	-	0	ID=cds-WP_135400914.1;Parent=gene-C9E94_RS07620;Dbxref=GenBank:WP_135400914.1;Name=WP_135400914.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517827.1;locus_tag=C9E94_RS07620;product=NADP-dependent oxidoreductase;protein_id=WP_135400914.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	47274	47789	.	+	.	ID=gene-C9E94_RS07625;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=C9E94_RS07625;old_locus_tag=C9E94_07805
NZ_PYJR01000057.1	Protein Homology	CDS	47274	47789	.	+	0	ID=cds-WP_000155373.1;Parent=gene-C9E94_RS07625;Dbxref=GenBank:WP_000155373.1;Name=WP_000155373.1;Note=Keep exception level- 87%25 similar to E. coli K12 P76112%2C different gene symbol;gbkey=CDS;gene=mddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460549.1;locus_tag=C9E94_RS07625;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=WP_000155373.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	47789	48238	.	+	.	ID=gene-C9E94_RS07630;Name=C9E94_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07630;old_locus_tag=C9E94_07810
NZ_PYJR01000057.1	Protein Homology	CDS	47789	48238	.	+	0	ID=cds-WP_001076571.1;Parent=gene-C9E94_RS07630;Dbxref=GenBank:WP_001076571.1;Name=WP_001076571.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460550.1;locus_tag=C9E94_RS07630;product=DMT family transporter;protein_id=WP_001076571.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	48243	48476	.	-	.	ID=gene-C9E94_RS07635;Name=C9E94_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07635;old_locus_tag=C9E94_07815
NZ_PYJR01000057.1	Protein Homology	CDS	48243	48476	.	-	0	ID=cds-WP_000018720.1;Parent=gene-C9E94_RS07635;Dbxref=GenBank:WP_000018720.1;Name=WP_000018720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460551.1;locus_tag=C9E94_RS07635;product=YdcY family protein;protein_id=WP_000018720.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	48700	50019	.	+	.	ID=gene-C9E94_RS07640;Name=srfA;gbkey=Gene;gene=srfA;gene_biotype=protein_coding;locus_tag=C9E94_RS07640;old_locus_tag=C9E94_07820
NZ_PYJR01000057.1	Protein Homology	CDS	48700	50019	.	+	0	ID=cds-WP_135400915.1;Parent=gene-C9E94_RS07640;Dbxref=GenBank:WP_135400915.1;Name=WP_135400915.1;gbkey=CDS;gene=srfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=C9E94_RS07640;product=virulence-associated effector SrfA;protein_id=WP_135400915.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	50024	53005	.	+	.	ID=gene-C9E94_RS07645;Name=C9E94_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07645;old_locus_tag=C9E94_07825
NZ_PYJR01000057.1	Protein Homology	CDS	50024	53005	.	+	0	ID=cds-WP_135400916.1;Parent=gene-C9E94_RS07645;Dbxref=GenBank:WP_135400916.1;Name=WP_135400916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=C9E94_RS07645;product=virulence factor SrfB;protein_id=WP_135400916.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	53002	55146	.	+	.	ID=gene-C9E94_RS07650;Name=srfC;gbkey=Gene;gene=srfC;gene_biotype=protein_coding;locus_tag=C9E94_RS07650;old_locus_tag=C9E94_07830
NZ_PYJR01000057.1	Protein Homology	CDS	53002	55146	.	+	0	ID=cds-WP_135400917.1;Parent=gene-C9E94_RS07650;Dbxref=GenBank:WP_135400917.1;Name=WP_135400917.1;gbkey=CDS;gene=srfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460554.1;locus_tag=C9E94_RS07650;product=virulence-associated effector SrfC;protein_id=WP_135400917.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	55191	55364	.	-	.	ID=gene-C9E94_RS07655;Name=C9E94_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07655;old_locus_tag=C9E94_07835
NZ_PYJR01000057.1	Protein Homology	CDS	55191	55364	.	-	0	ID=cds-WP_000171943.1;Parent=gene-C9E94_RS07655;Dbxref=GenBank:WP_000171943.1;Name=WP_000171943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=C9E94_RS07655;product=GhoT/OrtT family toxin;protein_id=WP_000171943.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	55563	55658	.	+	.	ID=gene-C9E94_RS07660;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=C9E94_RS07660;old_locus_tag=C9E94_07840
NZ_PYJR01000057.1	Protein Homology	CDS	55563	55658	.	+	0	ID=cds-WP_001103198.1;Parent=gene-C9E94_RS07660;Dbxref=GenBank:WP_001103198.1;Name=WP_001103198.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103198.1;locus_tag=C9E94_RS07660;product=stress response membrane protein YncL;protein_id=WP_001103198.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	55763	57208	.	-	.	ID=gene-C9E94_RS07665;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=C9E94_RS07665;old_locus_tag=C9E94_07845
NZ_PYJR01000057.1	Protein Homology	CDS	55763	57208	.	-	0	ID=cds-WP_000158093.1;Parent=gene-C9E94_RS07665;Dbxref=GenBank:WP_000158093.1;Name=WP_000158093.1;Ontology_term=GO:0009447,GO:0019145,GO:0051287;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase (NAD+) activity|0019145||IEA,NAD binding|0051287||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460556.3;locus_tag=C9E94_RS07665;product=aminobutyraldehyde dehydrogenase;protein_id=WP_000158093.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	57323	58747	.	-	.	ID=gene-C9E94_RS07670;Name=ycdR;gbkey=Gene;gene=ycdR;gene_biotype=protein_coding;locus_tag=C9E94_RS07670;old_locus_tag=C9E94_07850
NZ_PYJR01000057.1	Protein Homology	CDS	57323	58747	.	-	0	ID=cds-WP_000760698.1;Parent=gene-C9E94_RS07670;Dbxref=GenBank:WP_000760698.1;Name=WP_000760698.1;gbkey=CDS;gene=ycdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460557.1;locus_tag=C9E94_RS07670;product=GntR family transcriptional regulator YdcR;protein_id=WP_000760698.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	58883	59653	.	-	.	ID=gene-C9E94_RS07675;Name=C9E94_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07675;old_locus_tag=C9E94_07855
NZ_PYJR01000057.1	Protein Homology	CDS	58883	59653	.	-	0	ID=cds-WP_094889267.1;Parent=gene-C9E94_RS07675;Dbxref=GenBank:WP_094889267.1;Name=WP_094889267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460558.1;locus_tag=C9E94_RS07675;product=M15 family metallopeptidase;protein_id=WP_094889267.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	pseudogene	59912	60143	.	-	.	ID=gene-C9E94_RS07680;Name=C9E94_RS07680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS07680;old_locus_tag=C9E94_07860;pseudo=true
NZ_PYJR01000057.1	Protein Homology	CDS	59912	60143	.	-	0	ID=cds-C9E94_RS07680;Parent=gene-C9E94_RS07680;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448018.1;locus_tag=C9E94_RS07680;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	60176	60574	.	-	.	ID=gene-C9E94_RS07685;Name=ugtL;gbkey=Gene;gene=ugtL;gene_biotype=protein_coding;locus_tag=C9E94_RS07685;old_locus_tag=C9E94_07865
NZ_PYJR01000057.1	Protein Homology	CDS	60176	60574	.	-	0	ID=cds-WP_094889268.1;Parent=gene-C9E94_RS07685;Dbxref=GenBank:WP_094889268.1;Name=WP_094889268.1;gbkey=CDS;gene=ugtL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460560.1;locus_tag=C9E94_RS07685;product=regulatory protein UgtL;protein_id=WP_094889268.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	61101	62051	.	+	.	ID=gene-C9E94_RS07690;Name=sifB;gbkey=Gene;gene=sifB;gene_biotype=protein_coding;locus_tag=C9E94_RS07690;old_locus_tag=C9E94_07870
NZ_PYJR01000057.1	Protein Homology	CDS	61101	62051	.	+	0	ID=cds-WP_135400918.1;Parent=gene-C9E94_RS07690;Dbxref=GenBank:WP_135400918.1;Name=WP_135400918.1;gbkey=CDS;gene=sifB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460561.1;locus_tag=C9E94_RS07690;product=SPI-2 type III secretion system effector SifB;protein_id=WP_135400918.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	62324	62554	.	+	.	ID=gene-C9E94_RS07695;Name=C9E94_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07695;old_locus_tag=C9E94_07875
NZ_PYJR01000057.1	Protein Homology	CDS	62324	62554	.	+	0	ID=cds-WP_001537894.1;Parent=gene-C9E94_RS07695;Dbxref=GenBank:WP_001537894.1;Name=WP_001537894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460562.1;locus_tag=C9E94_RS07695;product=YncJ family protein;protein_id=WP_001537894.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	62555	64519	.	-	.	ID=gene-C9E94_RS07700;Name=C9E94_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07700;old_locus_tag=C9E94_07880
NZ_PYJR01000057.1	Protein Homology	CDS	62555	64519	.	-	0	ID=cds-WP_001249745.1;Parent=gene-C9E94_RS07700;Dbxref=GenBank:WP_001249745.1;Name=WP_001249745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460563.1;locus_tag=C9E94_RS07700;product=peptidase U32 family protein;protein_id=WP_001249745.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	64598	65134	.	-	.	ID=gene-C9E94_RS07705;Name=C9E94_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07705;old_locus_tag=C9E94_07885
NZ_PYJR01000057.1	Protein Homology	CDS	64598	65134	.	-	0	ID=cds-WP_023208751.1;Parent=gene-C9E94_RS07705;Dbxref=GenBank:WP_023208751.1;Name=WP_023208751.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460564.1;locus_tag=C9E94_RS07705;product=helix-turn-helix domain-containing protein;protein_id=WP_023208751.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	65226	66404	.	+	.	ID=gene-C9E94_RS07710;Name=C9E94_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07710;old_locus_tag=C9E94_07890
NZ_PYJR01000057.1	Protein Homology	CDS	65226	66404	.	+	0	ID=cds-WP_045717715.1;Parent=gene-C9E94_RS07710;Dbxref=GenBank:WP_045717715.1;Name=WP_045717715.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460565.1;locus_tag=C9E94_RS07710;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_045717715.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	66458	67126	.	-	.	ID=gene-C9E94_RS07715;Name=C9E94_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07715;old_locus_tag=C9E94_07895
NZ_PYJR01000057.1	Protein Homology	CDS	66458	67126	.	-	0	ID=cds-WP_001259025.1;Parent=gene-C9E94_RS07715;Dbxref=GenBank:WP_001259025.1;Name=WP_001259025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460566.1;locus_tag=C9E94_RS07715;product=DUF3313 domain-containing protein;protein_id=WP_001259025.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	67283	67879	.	-	.	ID=gene-C9E94_RS07720;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=C9E94_RS07720;old_locus_tag=C9E94_07900
NZ_PYJR01000057.1	Protein Homology	CDS	67283	67879	.	-	0	ID=cds-WP_000218280.1;Parent=gene-C9E94_RS07720;Dbxref=GenBank:WP_000218280.1;Name=WP_000218280.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460567.1;locus_tag=C9E94_RS07720;product=tellurite resistance methyltransferase TehB;protein_id=WP_000218280.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	67866	68879	.	-	.	ID=gene-C9E94_RS07725;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=C9E94_RS07725;old_locus_tag=C9E94_07905
NZ_PYJR01000057.1	Protein Homology	CDS	67866	68879	.	-	0	ID=cds-WP_135400919.1;Parent=gene-C9E94_RS07725;Dbxref=GenBank:WP_135400919.1;Name=WP_135400919.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460568.1;locus_tag=C9E94_RS07725;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_135400919.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	68986	69966	.	+	.	ID=gene-C9E94_RS07730;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=C9E94_RS07730;old_locus_tag=C9E94_07910
NZ_PYJR01000057.1	Protein Homology	CDS	68986	69966	.	+	0	ID=cds-WP_135400920.1;Parent=gene-C9E94_RS07730;Dbxref=GenBank:WP_135400920.1;Name=WP_135400920.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460569.1;locus_tag=C9E94_RS07730;product=YdcK family protein;protein_id=WP_135400920.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	69963	70502	.	-	.	ID=gene-C9E94_RS07735;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=C9E94_RS07735;old_locus_tag=C9E94_07915
NZ_PYJR01000057.1	Protein Homology	CDS	69963	70502	.	-	0	ID=cds-WP_135400921.1;Parent=gene-C9E94_RS07735;Dbxref=GenBank:WP_135400921.1;Name=WP_135400921.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460570.1;locus_tag=C9E94_RS07735;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_135400921.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	70719	71837	.	+	.	ID=gene-C9E94_RS07740;Name=C9E94_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07740;old_locus_tag=C9E94_07920
NZ_PYJR01000057.1	Protein Homology	CDS	70719	71837	.	+	0	ID=cds-WP_000144625.1;Parent=gene-C9E94_RS07740;Dbxref=GenBank:WP_000144625.1;Name=WP_000144625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460571.1;locus_tag=C9E94_RS07740;product=M42 family metallopeptidase;protein_id=WP_000144625.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	71834	72115	.	+	.	ID=gene-C9E94_RS07745;Name=sgcB;gbkey=Gene;gene=sgcB;gene_biotype=protein_coding;locus_tag=C9E94_RS07745;old_locus_tag=C9E94_07925
NZ_PYJR01000057.1	Protein Homology	CDS	71834	72115	.	+	0	ID=cds-WP_000976132.1;Parent=gene-C9E94_RS07745;Dbxref=GenBank:WP_000976132.1;Name=WP_000976132.1;gbkey=CDS;gene=sgcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460572.1;locus_tag=C9E94_RS07745;product=PTS sugar transporter subunit IIB SgcB;protein_id=WP_000976132.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	72126	73439	.	+	.	ID=gene-C9E94_RS07750;Name=sgcC;gbkey=Gene;gene=sgcC;gene_biotype=protein_coding;locus_tag=C9E94_RS07750;old_locus_tag=C9E94_07930
NZ_PYJR01000057.1	Protein Homology	CDS	72126	73439	.	+	0	ID=cds-WP_045717713.1;Parent=gene-C9E94_RS07750;Dbxref=GenBank:WP_045717713.1;Name=WP_045717713.1;gbkey=CDS;gene=sgcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460573.1;locus_tag=C9E94_RS07750;product=PTS sugar transporter subunit IIC SgcC;protein_id=WP_045717713.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	73453	74259	.	+	.	ID=gene-C9E94_RS07755;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=C9E94_RS07755;old_locus_tag=C9E94_07935
NZ_PYJR01000057.1	Protein Homology	CDS	73453	74259	.	+	0	ID=cds-WP_000118615.1;Parent=gene-C9E94_RS07755;Dbxref=GenBank:WP_000118615.1;Name=WP_000118615.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460574.1;locus_tag=C9E94_RS07755;product=BtpA family protein SgcQ;protein_id=WP_000118615.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	74391	74828	.	+	.	ID=gene-C9E94_RS07760;Name=sgcA;gbkey=Gene;gene=sgcA;gene_biotype=protein_coding;locus_tag=C9E94_RS07760;old_locus_tag=C9E94_07940
NZ_PYJR01000057.1	Protein Homology	CDS	74391	74828	.	+	0	ID=cds-WP_000606458.1;Parent=gene-C9E94_RS07760;Dbxref=GenBank:WP_000606458.1;Name=WP_000606458.1;gbkey=CDS;gene=sgcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460575.1;locus_tag=C9E94_RS07760;product=SgcA family PTS sugar transporter subunit IIA;protein_id=WP_000606458.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	74840	75472	.	+	.	ID=gene-C9E94_RS07765;Name=C9E94_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07765;old_locus_tag=C9E94_07945
NZ_PYJR01000057.1	Protein Homology	CDS	74840	75472	.	+	0	ID=cds-WP_126524126.1;Parent=gene-C9E94_RS07765;Dbxref=GenBank:WP_126524126.1;Name=WP_126524126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460576.1;locus_tag=C9E94_RS07765;product=ribulose-phosphate 3 epimerase family protein;protein_id=WP_126524126.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	75488	76279	.	+	.	ID=gene-C9E94_RS07770;Name=C9E94_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07770;old_locus_tag=C9E94_07950
NZ_PYJR01000057.1	Protein Homology	CDS	75488	76279	.	+	0	ID=cds-WP_001670738.1;Parent=gene-C9E94_RS07770;Dbxref=GenBank:WP_001670738.1;Name=WP_001670738.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460577.1;locus_tag=C9E94_RS07770;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001670738.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	76279	76716	.	+	.	ID=gene-C9E94_RS07775;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=C9E94_RS07775;old_locus_tag=C9E94_07955
NZ_PYJR01000057.1	Protein Homology	CDS	76279	76716	.	+	0	ID=cds-WP_023215744.1;Parent=gene-C9E94_RS07775;Dbxref=GenBank:WP_023215744.1;Name=WP_023215744.1;gbkey=CDS;gene=aac(6');inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=C9E94_RS07775;product=cryptic aminoglycoside N-acetyltransferase AAC(6')-Iy/Iaa;protein_id=WP_023215744.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	76763	77965	.	-	.	ID=gene-C9E94_RS07780;Name=C9E94_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07780;old_locus_tag=C9E94_07960
NZ_PYJR01000057.1	Protein Homology	CDS	76763	77965	.	-	0	ID=cds-WP_135400922.1;Parent=gene-C9E94_RS07780;Dbxref=GenBank:WP_135400922.1;Name=WP_135400922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460579.1;locus_tag=C9E94_RS07780;product=lactate oxidase;protein_id=WP_135400922.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	77977	78552	.	-	.	ID=gene-C9E94_RS07785;Name=C9E94_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07785;old_locus_tag=C9E94_07965
NZ_PYJR01000057.1	Protein Homology	CDS	77977	78552	.	-	0	ID=cds-WP_001024319.1;Parent=gene-C9E94_RS07785;Dbxref=GenBank:WP_001024319.1;Name=WP_001024319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460580.1;locus_tag=C9E94_RS07785;product=YceI family protein;protein_id=WP_001024319.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	78748	80403	.	-	.	ID=gene-C9E94_RS07790;Name=C9E94_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07790;old_locus_tag=C9E94_07970
NZ_PYJR01000057.1	Protein Homology	CDS	78748	80403	.	-	0	ID=cds-WP_080250317.1;Parent=gene-C9E94_RS07790;Dbxref=GenBank:WP_080250317.1;Name=WP_080250317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460581.1;locus_tag=C9E94_RS07790;product=glucan biosynthesis protein D;protein_id=WP_080250317.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	80623	82131	.	-	.	ID=gene-C9E94_RS07795;Name=C9E94_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07795;old_locus_tag=C9E94_07975
NZ_PYJR01000057.1	Protein Homology	CDS	80623	82131	.	-	0	ID=cds-WP_135400923.1;Parent=gene-C9E94_RS07795;Dbxref=GenBank:WP_135400923.1;Name=WP_135400923.1;Ontology_term=GO:0016298,GO:0052689;gbkey=CDS;go_function=lipase activity|0016298||IEA,carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460582.1;locus_tag=C9E94_RS07795;product=carboxylesterase/lipase family protein;protein_id=WP_135400923.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	82180	83523	.	-	.	ID=gene-C9E94_RS07800;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=C9E94_RS07800;old_locus_tag=C9E94_07980
NZ_PYJR01000057.1	Protein Homology	CDS	82180	83523	.	-	0	ID=cds-WP_000024092.1;Parent=gene-C9E94_RS07800;Dbxref=GenBank:WP_000024092.1;Name=WP_000024092.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=C9E94_RS07800;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=WP_000024092.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	83816	84739	.	+	.	ID=gene-C9E94_RS07805;Name=C9E94_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07805;old_locus_tag=C9E94_07985
NZ_PYJR01000057.1	Protein Homology	CDS	83816	84739	.	+	0	ID=cds-WP_135400924.1;Parent=gene-C9E94_RS07805;Dbxref=GenBank:WP_135400924.1;Name=WP_135400924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460584.1;locus_tag=C9E94_RS07805;product=LysR substrate-binding domain-containing protein;protein_id=WP_135400924.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	84800	86425	.	-	.	ID=gene-C9E94_RS07810;Name=C9E94_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07810;old_locus_tag=C9E94_07990
NZ_PYJR01000057.1	Protein Homology	CDS	84800	86425	.	-	0	ID=cds-WP_000528480.1;Parent=gene-C9E94_RS07810;Dbxref=GenBank:WP_000528480.1;Name=WP_000528480.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=C9E94_RS07810;product=methyl-accepting chemotaxis protein;protein_id=WP_000528480.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	86594	87712	.	-	.	ID=gene-C9E94_RS07820;Name=C9E94_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07820;old_locus_tag=C9E94_08000
NZ_PYJR01000057.1	Protein Homology	CDS	86594	87712	.	-	0	ID=cds-WP_000842142.1;Parent=gene-C9E94_RS07820;Dbxref=GenBank:WP_000842142.1;Name=WP_000842142.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=C9E94_RS07820;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_000842142.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	87744	88019	.	-	.	ID=gene-C9E94_RS07825;Name=C9E94_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07825;old_locus_tag=C9E94_08005
NZ_PYJR01000057.1	Protein Homology	CDS	87744	88019	.	-	0	ID=cds-WP_001120770.1;Parent=gene-C9E94_RS07825;Dbxref=GenBank:WP_001120770.1;Name=WP_001120770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=C9E94_RS07825;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_001120770.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	gene	88542	88943	.	+	.	ID=gene-C9E94_RS07830;Name=steB;gbkey=Gene;gene=steB;gene_biotype=protein_coding;locus_tag=C9E94_RS07830;old_locus_tag=C9E94_08010
NZ_PYJR01000057.1	Protein Homology	CDS	88542	88943	.	+	0	ID=cds-WP_135400925.1;Parent=gene-C9E94_RS07830;Dbxref=GenBank:WP_135400925.1;Name=WP_135400925.1;gbkey=CDS;gene=steB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448047.1;locus_tag=C9E94_RS07830;product=type III secretion system effector SteB;protein_id=WP_135400925.1;transl_table=11
NZ_PYJR01000057.1	RefSeq	pseudogene	89072	89300	.	-	.	ID=gene-C9E94_RS07835;Name=C9E94_RS07835;end_range=89300,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS07835;old_locus_tag=C9E94_08015;partial=true;pseudo=true
NZ_PYJR01000057.1	Protein Homology	CDS	89072	89300	.	-	1	ID=cds-C9E94_RS07835;Parent=gene-C9E94_RS07835;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=89300,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460589.1;locus_tag=C9E94_RS07835;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYJR01000081.1 1 88881
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000081.1	RefSeq	region	1	88881	.	+	.	ID=NZ_PYJR01000081.1:1..88881;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000081.1	RefSeq	gene	258	941	.	+	.	ID=gene-C9E94_RS10300;Name=C9E94_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10300;old_locus_tag=C9E94_10520
NZ_PYJR01000081.1	Protein Homology	CDS	258	941	.	+	0	ID=cds-WP_000378721.1;Parent=gene-C9E94_RS10300;Dbxref=GenBank:WP_000378721.1;Name=WP_000378721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462932.3;locus_tag=C9E94_RS10300;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_000378721.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	1099	2406	.	-	.	ID=gene-C9E94_RS10305;Name=C9E94_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10305;old_locus_tag=C9E94_10525
NZ_PYJR01000081.1	Protein Homology	CDS	1099	2406	.	-	0	ID=cds-WP_000566800.1;Parent=gene-C9E94_RS10305;Dbxref=GenBank:WP_000566800.1;Name=WP_000566800.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462933.1;locus_tag=C9E94_RS10305;product=TRAP transporter large permease;protein_id=WP_000566800.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	2399	2914	.	-	.	ID=gene-C9E94_RS10310;Name=C9E94_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10310;old_locus_tag=C9E94_10530
NZ_PYJR01000081.1	Protein Homology	CDS	2399	2914	.	-	0	ID=cds-WP_001091413.1;Parent=gene-C9E94_RS10310;Dbxref=GenBank:WP_001091413.1;Name=WP_001091413.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462934.1;locus_tag=C9E94_RS10310;product=TRAP transporter small permease;protein_id=WP_001091413.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	2933	3916	.	-	.	ID=gene-C9E94_RS10315;Name=C9E94_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10315;old_locus_tag=C9E94_10535
NZ_PYJR01000081.1	Protein Homology	CDS	2933	3916	.	-	0	ID=cds-WP_000812819.1;Parent=gene-C9E94_RS10315;Dbxref=GenBank:WP_000812819.1;Name=WP_000812819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=C9E94_RS10315;product=TRAP transporter substrate-binding protein;protein_id=WP_000812819.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	4245	4865	.	+	.	ID=gene-C9E94_RS10320;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=C9E94_RS10320;old_locus_tag=C9E94_10540
NZ_PYJR01000081.1	Protein Homology	CDS	4245	4865	.	+	0	ID=cds-WP_000122632.1;Parent=gene-C9E94_RS10320;Dbxref=GenBank:WP_000122632.1;Name=WP_000122632.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=C9E94_RS10320;product=superoxide dismutase [Mn];protein_id=WP_000122632.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	4935	5624	.	+	.	ID=gene-C9E94_RS10325;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=C9E94_RS10325;old_locus_tag=C9E94_10545
NZ_PYJR01000081.1	Protein Homology	CDS	4935	5624	.	+	0	ID=cds-WP_023204364.1;Parent=gene-C9E94_RS10325;Dbxref=GenBank:WP_023204364.1;Name=WP_023204364.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559227.1;locus_tag=C9E94_RS10325;product=6-hydroxyaminopurine reductase;protein_id=WP_023204364.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	5636	6031	.	+	.	ID=gene-C9E94_RS10330;Name=C9E94_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10330;old_locus_tag=C9E94_10550
NZ_PYJR01000081.1	Protein Homology	CDS	5636	6031	.	+	0	ID=cds-WP_000133442.1;Parent=gene-C9E94_RS10330;Dbxref=GenBank:WP_000133442.1;Name=WP_000133442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462938.1;locus_tag=C9E94_RS10330;product=nuclear transport factor 2 family protein;protein_id=WP_000133442.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	6152	6355	.	+	.	ID=gene-C9E94_RS10335;Name=C9E94_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10335;old_locus_tag=C9E94_10555
NZ_PYJR01000081.1	Protein Homology	CDS	6152	6355	.	+	0	ID=cds-WP_000338671.1;Parent=gene-C9E94_RS10335;Dbxref=GenBank:WP_000338671.1;Name=WP_000338671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000338671.1;locus_tag=C9E94_RS10335;product=hypothetical protein;protein_id=WP_000338671.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	6403	7776	.	-	.	ID=gene-C9E94_RS10340;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=C9E94_RS10340;old_locus_tag=C9E94_10560
NZ_PYJR01000081.1	Protein Homology	CDS	6403	7776	.	-	0	ID=cds-WP_000580402.1;Parent=gene-C9E94_RS10340;Dbxref=GenBank:WP_000580402.1;Name=WP_000580402.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462939.1;locus_tag=C9E94_RS10340;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_000580402.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	7773	8471	.	-	.	ID=gene-C9E94_RS10345;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=C9E94_RS10345;old_locus_tag=C9E94_10565
NZ_PYJR01000081.1	Protein Homology	CDS	7773	8471	.	-	0	ID=cds-WP_001033731.1;Parent=gene-C9E94_RS10345;Dbxref=GenBank:WP_001033731.1;Name=WP_001033731.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=C9E94_RS10345;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_001033731.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	8622	9122	.	+	.	ID=gene-C9E94_RS10350;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=C9E94_RS10350;old_locus_tag=C9E94_10570
NZ_PYJR01000081.1	Protein Homology	CDS	8622	9122	.	+	0	ID=cds-WP_001233463.1;Parent=gene-C9E94_RS10350;Dbxref=GenBank:WP_001233463.1;Name=WP_001233463.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462941.1;locus_tag=C9E94_RS10350;product=cell-envelope stress modulator CpxP;protein_id=WP_001233463.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	9270	10172	.	+	.	ID=gene-C9E94_RS10355;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=C9E94_RS10355;old_locus_tag=C9E94_10575
NZ_PYJR01000081.1	Protein Homology	CDS	9270	10172	.	+	0	ID=cds-WP_001077320.1;Parent=gene-C9E94_RS10355;Dbxref=GenBank:WP_001077320.1;Name=WP_001077320.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462942.1;locus_tag=C9E94_RS10355;product=CDF family cation-efflux transporter FieF;protein_id=WP_001077320.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	10357	11319	.	+	.	ID=gene-C9E94_RS10360;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=C9E94_RS10360;old_locus_tag=C9E94_10580
NZ_PYJR01000081.1	Protein Homology	CDS	10357	11319	.	+	0	ID=cds-WP_000591793.1;Parent=gene-C9E94_RS10360;Dbxref=GenBank:WP_000591793.1;Name=WP_000591793.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=C9E94_RS10360;product=6-phosphofructokinase;protein_id=WP_000591793.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	11523	12512	.	+	.	ID=gene-C9E94_RS10365;Name=C9E94_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10365;old_locus_tag=C9E94_10585
NZ_PYJR01000081.1	Protein Homology	CDS	11523	12512	.	+	0	ID=cds-WP_000758711.1;Parent=gene-C9E94_RS10365;Dbxref=GenBank:WP_000758711.1;Name=WP_000758711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=C9E94_RS10365;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_000758711.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	12613	13368	.	+	.	ID=gene-C9E94_RS10370;Name=C9E94_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10370;old_locus_tag=C9E94_10590
NZ_PYJR01000081.1	Protein Homology	CDS	12613	13368	.	+	0	ID=cds-WP_000750762.1;Parent=gene-C9E94_RS10370;Dbxref=GenBank:WP_000750762.1;Name=WP_000750762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=C9E94_RS10370;product=CDP-diacylglycerol diphosphatase;protein_id=WP_000750762.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	13632	14966	.	+	.	ID=gene-C9E94_RS10375;Name=C9E94_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10375;old_locus_tag=C9E94_10595
NZ_PYJR01000081.1	Protein Homology	CDS	13632	14966	.	+	0	ID=cds-WP_000777314.1;Parent=gene-C9E94_RS10375;Dbxref=GenBank:WP_000777314.1;Name=WP_000777314.1;Ontology_term=GO:0008643,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=C9E94_RS10375;product=MFS transporter;protein_id=WP_000777314.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	14977	15936	.	+	.	ID=gene-C9E94_RS10380;Name=C9E94_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10380;old_locus_tag=C9E94_10600
NZ_PYJR01000081.1	Protein Homology	CDS	14977	15936	.	+	0	ID=cds-WP_135400989.1;Parent=gene-C9E94_RS10380;Dbxref=GenBank:WP_135400989.1;Name=WP_135400989.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462947.1;locus_tag=C9E94_RS10380;product=aminoimidazole riboside kinase;protein_id=WP_135400989.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	15946	16986	.	+	.	ID=gene-C9E94_RS10385;Name=C9E94_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10385;old_locus_tag=C9E94_10605
NZ_PYJR01000081.1	Protein Homology	CDS	15946	16986	.	+	0	ID=cds-WP_021000986.1;Parent=gene-C9E94_RS10385;Dbxref=GenBank:WP_021000986.1;Name=WP_021000986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462948.1;locus_tag=C9E94_RS10385;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_021000986.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	17049	17771	.	+	.	ID=gene-C9E94_RS10390;Name=C9E94_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10390;old_locus_tag=C9E94_10610
NZ_PYJR01000081.1	Protein Homology	CDS	17049	17771	.	+	0	ID=cds-WP_001528882.1;Parent=gene-C9E94_RS10390;Dbxref=GenBank:WP_001528882.1;Name=WP_001528882.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462949.1;locus_tag=C9E94_RS10390;product=GntR family transcriptional regulator;protein_id=WP_001528882.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	pseudogene	17869	17997	.	+	.	ID=gene-C9E94_RS23460;Name=C9E94_RS23460;end_range=17997,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23460;old_locus_tag=C9E94_10615;partial=true;pseudo=true
NZ_PYJR01000081.1	Protein Homology	CDS	17869	17997	.	+	0	ID=cds-C9E94_RS23460;Parent=gene-C9E94_RS23460;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=17997,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000061010.1;locus_tag=C9E94_RS23460;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYJR01000081.1	RefSeq	pseudogene	18046	18186	.	+	.	ID=gene-C9E94_RS23465;Name=C9E94_RS23465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23465;old_locus_tag=C9E94_10620;partial=true;pseudo=true;start_range=.,18046
NZ_PYJR01000081.1	Protein Homology	CDS	18046	18186	.	+	0	ID=cds-C9E94_RS23465;Parent=gene-C9E94_RS23465;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008654,GO:0008715,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=C9E94_RS23465;partial=true;product=CDP-diacylglycerol diphosphatase;pseudo=true;start_range=.,18046;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	18276	18626	.	-	.	ID=gene-C9E94_RS10405;Name=C9E94_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10405;old_locus_tag=C9E94_10625
NZ_PYJR01000081.1	Protein Homology	CDS	18276	18626	.	-	0	ID=cds-WP_001173083.1;Parent=gene-C9E94_RS10405;Dbxref=GenBank:WP_001173083.1;Name=WP_001173083.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742380.1;locus_tag=C9E94_RS10405;product=cupin domain-containing protein;protein_id=WP_001173083.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	18640	20232	.	-	.	ID=gene-C9E94_RS10410;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=C9E94_RS10410;old_locus_tag=C9E94_10630
NZ_PYJR01000081.1	Protein Homology	CDS	18640	20232	.	-	0	ID=cds-WP_000113085.1;Parent=gene-C9E94_RS10410;Dbxref=GenBank:WP_000113085.1;Name=WP_000113085.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462953.1;locus_tag=C9E94_RS10410;product=autoinducer-2 kinase;protein_id=WP_000113085.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	20319	21278	.	-	.	ID=gene-C9E94_RS10415;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=C9E94_RS10415;old_locus_tag=C9E94_10635
NZ_PYJR01000081.1	Protein Homology	CDS	20319	21278	.	-	0	ID=cds-WP_001283049.1;Parent=gene-C9E94_RS10415;Dbxref=GenBank:WP_001283049.1;Name=WP_001283049.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462954.1;locus_tag=C9E94_RS10415;product=transcriptional regulator LsrR;protein_id=WP_001283049.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	21534	23069	.	+	.	ID=gene-C9E94_RS10420;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=C9E94_RS10420;old_locus_tag=C9E94_10640
NZ_PYJR01000081.1	Protein Homology	CDS	21534	23069	.	+	0	ID=cds-WP_135400990.1;Parent=gene-C9E94_RS10420;Dbxref=GenBank:WP_135400990.1;Name=WP_135400990.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462955.1;locus_tag=C9E94_RS10420;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_135400990.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	23063	24106	.	+	.	ID=gene-C9E94_RS10425;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=C9E94_RS10425;old_locus_tag=C9E94_10645
NZ_PYJR01000081.1	Protein Homology	CDS	23063	24106	.	+	0	ID=cds-WP_000911133.1;Parent=gene-C9E94_RS10425;Dbxref=GenBank:WP_000911133.1;Name=WP_000911133.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462956.1;locus_tag=C9E94_RS10425;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_000911133.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	24103	25104	.	+	.	ID=gene-C9E94_RS10430;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=C9E94_RS10430;old_locus_tag=C9E94_10650
NZ_PYJR01000081.1	Protein Homology	CDS	24103	25104	.	+	0	ID=cds-WP_000981826.1;Parent=gene-C9E94_RS10430;Dbxref=GenBank:WP_000981826.1;Name=WP_000981826.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462957.1;locus_tag=C9E94_RS10430;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WP_000981826.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	25133	26155	.	+	.	ID=gene-C9E94_RS10435;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=C9E94_RS10435;old_locus_tag=C9E94_10655
NZ_PYJR01000081.1	Protein Homology	CDS	25133	26155	.	+	0	ID=cds-WP_000090737.1;Parent=gene-C9E94_RS10435;Dbxref=GenBank:WP_000090737.1;Name=WP_000090737.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462958.1;locus_tag=C9E94_RS10435;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_000090737.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	26184	27059	.	+	.	ID=gene-C9E94_RS10440;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=C9E94_RS10440;old_locus_tag=C9E94_10660
NZ_PYJR01000081.1	Protein Homology	CDS	26184	27059	.	+	0	ID=cds-WP_000774146.1;Parent=gene-C9E94_RS10440;Dbxref=GenBank:WP_000774146.1;Name=WP_000774146.1;gbkey=CDS;gene=lsrF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774144.1;locus_tag=C9E94_RS10440;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase LsrF;protein_id=WP_000774146.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	27142	27432	.	+	.	ID=gene-C9E94_RS10445;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=C9E94_RS10445;old_locus_tag=C9E94_10665
NZ_PYJR01000081.1	Protein Homology	CDS	27142	27432	.	+	0	ID=cds-WP_001543603.1;Parent=gene-C9E94_RS10445;Dbxref=GenBank:WP_001543603.1;Name=WP_001543603.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=C9E94_RS10445;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_001543603.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	27442	28206	.	+	.	ID=gene-C9E94_RS10450;Name=C9E94_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10450;old_locus_tag=C9E94_10670
NZ_PYJR01000081.1	Protein Homology	CDS	27442	28206	.	+	0	ID=cds-WP_135400991.1;Parent=gene-C9E94_RS10450;Dbxref=GenBank:WP_135400991.1;Name=WP_135400991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462961.1;locus_tag=C9E94_RS10450;product=epimerase;protein_id=WP_135400991.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	28298	29065	.	-	.	ID=gene-C9E94_RS10455;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=C9E94_RS10455;old_locus_tag=C9E94_10675
NZ_PYJR01000081.1	Protein Homology	CDS	28298	29065	.	-	0	ID=cds-WP_001216339.1;Parent=gene-C9E94_RS10455;Dbxref=GenBank:WP_001216339.1;Name=WP_001216339.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462962.1;locus_tag=C9E94_RS10455;product=triose-phosphate isomerase;protein_id=WP_001216339.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	29178	29774	.	-	.	ID=gene-C9E94_RS10460;Name=C9E94_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10460;old_locus_tag=C9E94_10680
NZ_PYJR01000081.1	Protein Homology	CDS	29178	29774	.	-	0	ID=cds-WP_000802241.1;Parent=gene-C9E94_RS10460;Dbxref=GenBank:WP_000802241.1;Name=WP_000802241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462963.1;locus_tag=C9E94_RS10460;product=YiiQ family protein;protein_id=WP_000802241.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	29875	30303	.	+	.	ID=gene-C9E94_RS10465;Name=C9E94_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10465;old_locus_tag=C9E94_10685
NZ_PYJR01000081.1	Protein Homology	CDS	29875	30303	.	+	0	ID=cds-WP_000155237.1;Parent=gene-C9E94_RS10465;Dbxref=GenBank:WP_000155237.1;Name=WP_000155237.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462964.1;locus_tag=C9E94_RS10465;product=DUF805 domain-containing protein;protein_id=WP_000155237.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	30410	31156	.	-	.	ID=gene-C9E94_RS10470;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=C9E94_RS10470;old_locus_tag=C9E94_10690
NZ_PYJR01000081.1	Protein Homology	CDS	30410	31156	.	-	0	ID=cds-WP_000796304.1;Parent=gene-C9E94_RS10470;Dbxref=GenBank:WP_000796304.1;Name=WP_000796304.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462965.1;locus_tag=C9E94_RS10470;product=ferredoxin--NADP(+) reductase;protein_id=WP_000796304.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	31253	32263	.	-	.	ID=gene-C9E94_RS10475;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=C9E94_RS10475;old_locus_tag=C9E94_10695
NZ_PYJR01000081.1	Protein Homology	CDS	31253	32263	.	-	0	ID=cds-WP_001250617.1;Parent=gene-C9E94_RS10475;Dbxref=GenBank:WP_001250617.1;Name=WP_001250617.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462966.1;locus_tag=C9E94_RS10475;product=class II fructose-bisphosphatase;protein_id=WP_001250617.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	32375	33883	.	-	.	ID=gene-C9E94_RS10480;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=C9E94_RS10480;old_locus_tag=C9E94_10700
NZ_PYJR01000081.1	Protein Homology	CDS	32375	33883	.	-	0	ID=cds-WP_000136809.1;Parent=gene-C9E94_RS10480;Dbxref=GenBank:WP_000136809.1;Name=WP_000136809.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462967.1;locus_tag=C9E94_RS10480;product=glycerol kinase GlpK;protein_id=WP_000136809.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	33904	34749	.	-	.	ID=gene-C9E94_RS10485;Name=C9E94_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10485;old_locus_tag=C9E94_10705
NZ_PYJR01000081.1	Protein Homology	CDS	33904	34749	.	-	0	ID=cds-WP_000084285.1;Parent=gene-C9E94_RS10485;Dbxref=GenBank:WP_000084285.1;Name=WP_000084285.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462968.1;locus_tag=C9E94_RS10485;product=MIP/aquaporin family protein;protein_id=WP_000084285.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	35148	35387	.	+	.	ID=gene-C9E94_RS10490;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=C9E94_RS10490;old_locus_tag=C9E94_10710
NZ_PYJR01000081.1	Protein Homology	CDS	35148	35387	.	+	0	ID=cds-WP_000051370.1;Parent=gene-C9E94_RS10490;Dbxref=GenBank:WP_000051370.1;Name=WP_000051370.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229475.1;locus_tag=C9E94_RS10490;product=septal ring assembly protein ZapB;protein_id=WP_000051370.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	35609	36094	.	-	.	ID=gene-C9E94_RS10495;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=C9E94_RS10495;old_locus_tag=C9E94_10715
NZ_PYJR01000081.1	Protein Homology	CDS	35609	36094	.	-	0	ID=cds-WP_000872918.1;Parent=gene-C9E94_RS10495;Dbxref=GenBank:WP_000872918.1;Name=WP_000872918.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=C9E94_RS10495;product=ribonuclease E activity regulator RraA;protein_id=WP_000872918.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	36187	37116	.	-	.	ID=gene-C9E94_RS10500;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=C9E94_RS10500;old_locus_tag=C9E94_10720
NZ_PYJR01000081.1	Protein Homology	CDS	36187	37116	.	-	0	ID=cds-WP_000139639.1;Parent=gene-C9E94_RS10500;Dbxref=GenBank:WP_000139639.1;Name=WP_000139639.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462971.1;locus_tag=C9E94_RS10500;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_000139639.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	37183	38514	.	-	.	ID=gene-C9E94_RS10505;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=C9E94_RS10505;old_locus_tag=C9E94_10725
NZ_PYJR01000081.1	Protein Homology	CDS	37183	38514	.	-	0	ID=cds-WP_001293360.1;Parent=gene-C9E94_RS10505;Dbxref=GenBank:WP_001293360.1;Name=WP_001293360.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=C9E94_RS10505;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_001293360.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	38524	39054	.	-	.	ID=gene-C9E94_RS10510;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=C9E94_RS10510;old_locus_tag=C9E94_10730
NZ_PYJR01000081.1	Protein Homology	CDS	38524	39054	.	-	0	ID=cds-WP_111753896.1;Parent=gene-C9E94_RS10510;Dbxref=GenBank:WP_111753896.1;Name=WP_111753896.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462973.1;locus_tag=C9E94_RS10510;product=ATP-dependent protease subunit HslV;protein_id=WP_111753896.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	39146	40135	.	-	.	ID=gene-C9E94_RS10515;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=C9E94_RS10515;old_locus_tag=C9E94_10735
NZ_PYJR01000081.1	Protein Homology	CDS	39146	40135	.	-	0	ID=cds-WP_063874664.1;Parent=gene-C9E94_RS10515;Dbxref=GenBank:WP_063874664.1;Name=WP_063874664.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462974.1;locus_tag=C9E94_RS10515;product=cell division protein FtsN;protein_id=WP_063874664.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	40229	41254	.	-	.	ID=gene-C9E94_RS10520;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=C9E94_RS10520;old_locus_tag=C9E94_10740
NZ_PYJR01000081.1	Protein Homology	CDS	40229	41254	.	-	0	ID=cds-WP_000841337.1;Parent=gene-C9E94_RS10520;Dbxref=GenBank:WP_000841337.1;Name=WP_000841337.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462975.1;locus_tag=C9E94_RS10520;product=DNA-binding transcriptional regulator CytR;protein_id=WP_000841337.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	41409	43607	.	-	.	ID=gene-C9E94_RS10525;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=C9E94_RS10525;old_locus_tag=C9E94_10745
NZ_PYJR01000081.1	Protein Homology	CDS	41409	43607	.	-	0	ID=cds-WP_000109397.1;Parent=gene-C9E94_RS10525;Dbxref=GenBank:WP_000109397.1;Name=WP_000109397.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462976.1;locus_tag=C9E94_RS10525;product=primosomal protein N';protein_id=WP_000109397.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	43811	44023	.	+	.	ID=gene-C9E94_RS10530;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=C9E94_RS10530;old_locus_tag=C9E94_10750
NZ_PYJR01000081.1	Protein Homology	CDS	43811	44023	.	+	0	ID=cds-WP_000715284.1;Parent=gene-C9E94_RS10530;Dbxref=GenBank:WP_000715284.1;Name=WP_000715284.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462977.1;locus_tag=C9E94_RS10530;product=50S ribosomal protein L31;protein_id=WP_000715284.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	44068	44730	.	-	.	ID=gene-C9E94_RS10535;Name=C9E94_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10535;old_locus_tag=C9E94_10755
NZ_PYJR01000081.1	Protein Homology	CDS	44068	44730	.	-	0	ID=cds-WP_000792803.1;Parent=gene-C9E94_RS10535;Dbxref=GenBank:WP_000792803.1;Name=WP_000792803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462978.1;locus_tag=C9E94_RS10535;product=TIGR02117 family protein;protein_id=WP_000792803.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	44931	46721	.	-	.	ID=gene-C9E94_RS10540;Name=C9E94_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10540;old_locus_tag=C9E94_10760
NZ_PYJR01000081.1	Protein Homology	CDS	44931	46721	.	-	0	ID=cds-WP_000899644.1;Parent=gene-C9E94_RS10540;Dbxref=GenBank:WP_000899644.1;Name=WP_000899644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=C9E94_RS10540;product=aryl-sulfate sulfotransferase;protein_id=WP_000899644.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	47177	47494	.	-	.	ID=gene-C9E94_RS10545;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=C9E94_RS10545;old_locus_tag=C9E94_10765
NZ_PYJR01000081.1	Protein Homology	CDS	47177	47494	.	-	0	ID=cds-WP_000852811.1;Parent=gene-C9E94_RS10545;Dbxref=GenBank:WP_000852811.1;Name=WP_000852811.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=C9E94_RS10545;product=met regulon transcriptional regulator MetJ;protein_id=WP_000852811.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	47759	48919	.	+	.	ID=gene-C9E94_RS10550;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=C9E94_RS10550;old_locus_tag=C9E94_10770
NZ_PYJR01000081.1	Protein Homology	CDS	47759	48919	.	+	0	ID=cds-WP_061378739.1;Parent=gene-C9E94_RS10550;Dbxref=GenBank:WP_061378739.1;Name=WP_061378739.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462981.1;locus_tag=C9E94_RS10550;product=cystathionine gamma-synthase;protein_id=WP_061378739.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	48922	51354	.	+	.	ID=gene-C9E94_RS10555;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;locus_tag=C9E94_RS10555;old_locus_tag=C9E94_10775
NZ_PYJR01000081.1	Protein Homology	CDS	48922	51354	.	+	0	ID=cds-WP_061378740.1;Parent=gene-C9E94_RS10555;Dbxref=GenBank:WP_061378740.1;Name=WP_061378740.1;gbkey=CDS;gene=metL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=C9E94_RS10555;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_061378740.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	51470	52327	.	-	.	ID=gene-C9E94_RS10560;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=C9E94_RS10560;old_locus_tag=C9E94_10780
NZ_PYJR01000081.1	Protein Homology	CDS	51470	52327	.	-	0	ID=cds-WP_061378741.1;Parent=gene-C9E94_RS10560;Dbxref=GenBank:WP_061378741.1;Name=WP_061378741.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462983.1;locus_tag=C9E94_RS10560;product=small-conductance mechanosensitive channel MscS;protein_id=WP_061378741.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	52330	53328	.	-	.	ID=gene-C9E94_RS10565;Name=C9E94_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10565;old_locus_tag=C9E94_10785
NZ_PYJR01000081.1	Protein Homology	CDS	52330	53328	.	-	0	ID=cds-WP_000406814.1;Parent=gene-C9E94_RS10565;Dbxref=GenBank:WP_000406814.1;Name=WP_000406814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406820.1;locus_tag=C9E94_RS10565;product=hypothetical protein;protein_id=WP_000406814.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	53563	54687	.	-	.	ID=gene-C9E94_RS10570;Name=C9E94_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10570;old_locus_tag=C9E94_10790
NZ_PYJR01000081.1	Protein Homology	CDS	53563	54687	.	-	0	ID=cds-WP_001134808.1;Parent=gene-C9E94_RS10570;Dbxref=GenBank:WP_001134808.1;Name=WP_001134808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462984.1;locus_tag=C9E94_RS10570;product=hypothetical protein;protein_id=WP_001134808.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	54823	56379	.	+	.	ID=gene-C9E94_RS10575;Name=C9E94_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10575;old_locus_tag=C9E94_10795
NZ_PYJR01000081.1	Protein Homology	CDS	54823	56379	.	+	0	ID=cds-WP_058216650.1;Parent=gene-C9E94_RS10575;Dbxref=GenBank:WP_058216650.1;Name=WP_058216650.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462985.1;locus_tag=C9E94_RS10575;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_058216650.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	56574	57464	.	+	.	ID=gene-C9E94_RS10580;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=C9E94_RS10580;old_locus_tag=C9E94_10800
NZ_PYJR01000081.1	Protein Homology	CDS	56574	57464	.	+	0	ID=cds-WP_000007507.1;Parent=gene-C9E94_RS10580;Dbxref=GenBank:WP_000007507.1;Name=WP_000007507.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase [NAD(P)H] activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462986.1;locus_tag=C9E94_RS10580;product=methylenetetrahydrofolate reductase;protein_id=WP_000007507.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	57629	59809	.	+	.	ID=gene-C9E94_RS10585;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=C9E94_RS10585;old_locus_tag=C9E94_10805
NZ_PYJR01000081.1	Protein Homology	CDS	57629	59809	.	+	0	ID=cds-WP_135400992.1;Parent=gene-C9E94_RS10585;Dbxref=GenBank:WP_135400992.1;Name=WP_135400992.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462987.1;locus_tag=C9E94_RS10585;product=catalase/peroxidase HPI;protein_id=WP_135400992.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	59867	60490	.	-	.	ID=gene-C9E94_RS10590;Name=C9E94_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10590;old_locus_tag=C9E94_10810
NZ_PYJR01000081.1	Protein Homology	CDS	59867	60490	.	-	0	ID=cds-WP_000666689.1;Parent=gene-C9E94_RS10590;Dbxref=GenBank:WP_000666689.1;Name=WP_000666689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462988.1;locus_tag=C9E94_RS10590;product=DUF1287 domain-containing protein;protein_id=WP_000666689.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	60749	61852	.	-	.	ID=gene-C9E94_RS10595;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=C9E94_RS10595;old_locus_tag=C9E94_10815
NZ_PYJR01000081.1	Protein Homology	CDS	60749	61852	.	-	0	ID=cds-WP_000374031.1;Parent=gene-C9E94_RS10595;Dbxref=GenBank:WP_000374031.1;Name=WP_000374031.1;Ontology_term=GO:0019588,GO:0051596,GO:0008888,GO:0019147;gbkey=CDS;gene=gldA;go_function=glycerol dehydrogenase (NAD+) activity|0008888||IEA,(R)-aminopropanol dehydrogenase activity|0019147||IEA;go_process=anaerobic glycerol catabolic process|0019588||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462989.1;locus_tag=C9E94_RS10595;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=WP_000374031.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	61864	62526	.	-	.	ID=gene-C9E94_RS10600;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=C9E94_RS10600;old_locus_tag=C9E94_10820
NZ_PYJR01000081.1	Protein Homology	CDS	61864	62526	.	-	0	ID=cds-WP_000424866.1;Parent=gene-C9E94_RS10600;Dbxref=GenBank:WP_000424866.1;Name=WP_000424866.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462990.1;locus_tag=C9E94_RS10600;product=fructose-6-phosphate aldolase;protein_id=WP_000424866.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	62537	65038	.	-	.	ID=gene-C9E94_RS10605;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=C9E94_RS10605;old_locus_tag=C9E94_10825
NZ_PYJR01000081.1	Protein Homology	CDS	62537	65038	.	-	0	ID=cds-WP_001128493.1;Parent=gene-C9E94_RS10605;Dbxref=GenBank:WP_001128493.1;Name=WP_001128493.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462991.1;locus_tag=C9E94_RS10605;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_001128493.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	65347	66426	.	+	.	ID=gene-C9E94_RS10610;Name=C9E94_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10610;old_locus_tag=C9E94_10830
NZ_PYJR01000081.1	Protein Homology	CDS	65347	66426	.	+	0	ID=cds-WP_000661597.1;Parent=gene-C9E94_RS10610;Dbxref=GenBank:WP_000661597.1;Name=WP_000661597.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462992.1;locus_tag=C9E94_RS10610;product=PTS fructose transporter subunit EIIC;protein_id=WP_000661597.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	66441	66761	.	+	.	ID=gene-C9E94_RS10615;Name=C9E94_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10615;old_locus_tag=C9E94_10835
NZ_PYJR01000081.1	Protein Homology	CDS	66441	66761	.	+	0	ID=cds-WP_000161258.1;Parent=gene-C9E94_RS10615;Dbxref=GenBank:WP_000161258.1;Name=WP_000161258.1;Ontology_term=GO:0009401,GO:0022877;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462993.1;locus_tag=C9E94_RS10615;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000161258.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	66860	69157	.	+	.	ID=gene-C9E94_RS10620;Name=C9E94_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10620;old_locus_tag=C9E94_10840
NZ_PYJR01000081.1	Protein Homology	CDS	66860	69157	.	+	0	ID=cds-WP_000149714.1;Parent=gene-C9E94_RS10620;Dbxref=GenBank:WP_000149714.1;Name=WP_000149714.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462994.1;locus_tag=C9E94_RS10620;product=formate C-acetyltransferase;protein_id=WP_000149714.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	69123	70001	.	+	.	ID=gene-C9E94_RS10625;Name=C9E94_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10625;old_locus_tag=C9E94_10845
NZ_PYJR01000081.1	Protein Homology	CDS	69123	70001	.	+	0	ID=cds-WP_000171724.1;Parent=gene-C9E94_RS10625;Dbxref=GenBank:WP_000171724.1;Name=WP_000171724.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462995.1;locus_tag=C9E94_RS10625;product=[formate-C-acetyltransferase]-activating enzyme;protein_id=WP_000171724.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	70003	70356	.	+	.	ID=gene-C9E94_RS10630;Name=C9E94_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10630;old_locus_tag=C9E94_10850
NZ_PYJR01000081.1	Protein Homology	CDS	70003	70356	.	+	0	ID=cds-WP_000290522.1;Parent=gene-C9E94_RS10630;Dbxref=GenBank:WP_000290522.1;Name=WP_000290522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462996.1;locus_tag=C9E94_RS10630;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000290522.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	70343	71194	.	-	.	ID=gene-C9E94_RS10635;Name=C9E94_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10635;old_locus_tag=C9E94_10855
NZ_PYJR01000081.1	Protein Homology	CDS	70343	71194	.	-	0	ID=cds-WP_135400993.1;Parent=gene-C9E94_RS10635;Dbxref=GenBank:WP_135400993.1;Name=WP_135400993.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462997.1;locus_tag=C9E94_RS10635;product=helix-turn-helix transcriptional regulator;protein_id=WP_135400993.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	71355	73088	.	-	.	ID=gene-C9E94_RS10640;Name=C9E94_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10640;old_locus_tag=C9E94_10860
NZ_PYJR01000081.1	Protein Homology	CDS	71355	73088	.	-	0	ID=cds-WP_001192092.1;Parent=gene-C9E94_RS10640;Dbxref=GenBank:WP_001192092.1;Name=WP_001192092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462998.1;locus_tag=C9E94_RS10640;product=phosphoethanolamine transferase CptA;protein_id=WP_001192092.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	73299	75950	.	-	.	ID=gene-C9E94_RS10645;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=C9E94_RS10645;old_locus_tag=C9E94_10865
NZ_PYJR01000081.1	Protein Homology	CDS	73299	75950	.	-	0	ID=cds-WP_001005548.1;Parent=gene-C9E94_RS10645;Dbxref=GenBank:WP_001005548.1;Name=WP_001005548.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=C9E94_RS10645;product=phosphoenolpyruvate carboxylase;protein_id=WP_001005548.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	76319	77470	.	-	.	ID=gene-C9E94_RS10650;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=C9E94_RS10650;old_locus_tag=C9E94_10875
NZ_PYJR01000081.1	Protein Homology	CDS	76319	77470	.	-	0	ID=cds-WP_000800208.1;Parent=gene-C9E94_RS10650;Dbxref=GenBank:WP_000800208.1;Name=WP_000800208.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463000.1;locus_tag=C9E94_RS10650;product=acetylornithine deacetylase;protein_id=WP_000800208.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	77559	78563	.	+	.	ID=gene-C9E94_RS10655;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=C9E94_RS10655;old_locus_tag=C9E94_10880
NZ_PYJR01000081.1	Protein Homology	CDS	77559	78563	.	+	0	ID=cds-WP_000935332.1;Parent=gene-C9E94_RS10655;Dbxref=GenBank:WP_000935332.1;Name=WP_000935332.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=C9E94_RS10655;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_000935332.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	78571	79347	.	+	.	ID=gene-C9E94_RS10660;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=C9E94_RS10660;old_locus_tag=C9E94_10885
NZ_PYJR01000081.1	Protein Homology	CDS	78571	79347	.	+	0	ID=cds-WP_001575262.1;Parent=gene-C9E94_RS10660;Dbxref=GenBank:WP_001575262.1;Name=WP_001575262.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=C9E94_RS10660;product=acetylglutamate kinase;protein_id=WP_001575262.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	79465	80841	.	+	.	ID=gene-C9E94_RS10665;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=C9E94_RS10665;old_locus_tag=C9E94_10890
NZ_PYJR01000081.1	Protein Homology	CDS	79465	80841	.	+	0	ID=cds-WP_010835126.1;Parent=gene-C9E94_RS10665;Dbxref=GenBank:WP_010835126.1;Name=WP_010835126.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463003.1;locus_tag=C9E94_RS10665;product=argininosuccinate lyase;protein_id=WP_010835126.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	81125	82042	.	+	.	ID=gene-C9E94_RS10675;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=C9E94_RS10675;old_locus_tag=C9E94_10900
NZ_PYJR01000081.1	Protein Homology	CDS	81125	82042	.	+	0	ID=cds-WP_001025919.1;Parent=gene-C9E94_RS10675;Dbxref=GenBank:WP_001025919.1;Name=WP_001025919.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=C9E94_RS10675;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_001025919.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	82025	83425	.	-	.	ID=gene-C9E94_RS10680;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=C9E94_RS10680;old_locus_tag=C9E94_10905
NZ_PYJR01000081.1	Protein Homology	CDS	82025	83425	.	-	0	ID=cds-WP_001120791.1;Parent=gene-C9E94_RS10680;Dbxref=GenBank:WP_001120791.1;Name=WP_001120791.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=C9E94_RS10680;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_001120791.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	83624	84259	.	+	.	ID=gene-C9E94_RS10685;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=C9E94_RS10685;old_locus_tag=C9E94_10915
NZ_PYJR01000081.1	Protein Homology	CDS	83624	84259	.	+	0	ID=cds-WP_000971958.1;Parent=gene-C9E94_RS10685;Dbxref=GenBank:WP_000971958.1;Name=WP_000971958.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463006.3;locus_tag=C9E94_RS10685;product=HTH-type transcriptional repressor FabR;protein_id=WP_000971958.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	84275	84634	.	+	.	ID=gene-C9E94_RS10690;Name=C9E94_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10690;old_locus_tag=C9E94_10920
NZ_PYJR01000081.1	Protein Homology	CDS	84275	84634	.	+	0	ID=cds-WP_000813838.1;Parent=gene-C9E94_RS10690;Dbxref=GenBank:WP_000813838.1;Name=WP_000813838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463007.1;locus_tag=C9E94_RS10690;product=YijD family membrane protein;protein_id=WP_000813838.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	84681	85781	.	-	.	ID=gene-C9E94_RS10695;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=C9E94_RS10695;old_locus_tag=C9E94_10925
NZ_PYJR01000081.1	Protein Homology	CDS	84681	85781	.	-	0	ID=cds-WP_023200574.1;Parent=gene-C9E94_RS10695;Dbxref=GenBank:WP_023200574.1;Name=WP_023200574.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463008.1;locus_tag=C9E94_RS10695;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_023200574.1;transl_table=11
NZ_PYJR01000081.1	cmsearch	riboswitch	85896	86088	.	+	.	ID=id-NZ_PYJR01000081.1:85896..86088;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PYJR01000081.1	RefSeq	gene	86155	87999	.	+	.	ID=gene-C9E94_RS10700;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=C9E94_RS10700;old_locus_tag=C9E94_10930
NZ_PYJR01000081.1	Protein Homology	CDS	86155	87999	.	+	0	ID=cds-WP_000591403.1;Parent=gene-C9E94_RS10700;Dbxref=GenBank:WP_000591403.1;Name=WP_000591403.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463009.1;locus_tag=C9E94_RS10700;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_000591403.1;transl_table=11
NZ_PYJR01000081.1	RefSeq	gene	87944	88795	.	+	.	ID=gene-C9E94_RS10705;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=C9E94_RS10705;old_locus_tag=C9E94_10935
NZ_PYJR01000081.1	Protein Homology	CDS	87944	88795	.	+	0	ID=cds-WP_000201804.1;Parent=gene-C9E94_RS10705;Dbxref=GenBank:WP_000201804.1;Name=WP_000201804.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463010.1;locus_tag=C9E94_RS10705;product=glutamate racemase;protein_id=WP_000201804.1;transl_table=11
##sequence-region NZ_PYJR01000005.1 1 84092
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000005.1	RefSeq	region	1	84092	.	+	.	ID=NZ_PYJR01000005.1:1..84092;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000005.1	RefSeq	gene	139	1155	.	-	.	ID=gene-C9E94_RS23325;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=C9E94_RS23325;old_locus_tag=C9E94_00115
NZ_PYJR01000005.1	Protein Homology	CDS	139	1155	.	-	0	ID=cds-WP_000209756.1;Parent=gene-C9E94_RS23325;Dbxref=GenBank:WP_000209756.1;Name=WP_000209756.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463432.1;locus_tag=C9E94_RS23325;product=lipoate--protein ligase LplA;protein_id=WP_000209756.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	1189	1833	.	-	.	ID=gene-C9E94_RS23330;Name=C9E94_RS23330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23330;old_locus_tag=C9E94_00120
NZ_PYJR01000005.1	Protein Homology	CDS	1189	1833	.	-	0	ID=cds-WP_000090067.1;Parent=gene-C9E94_RS23330;Dbxref=GenBank:WP_000090067.1;Name=WP_000090067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463433.2;locus_tag=C9E94_RS23330;product=YtjB family periplasmic protein;protein_id=WP_000090067.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	1950	2918	.	+	.	ID=gene-C9E94_RS00125;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=C9E94_RS00125;old_locus_tag=C9E94_00130
NZ_PYJR01000005.1	Protein Homology	CDS	1950	2918	.	+	0	ID=cds-WP_001132983.1;Parent=gene-C9E94_RS00125;Dbxref=GenBank:WP_001132983.1;Name=WP_001132983.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463434.1;locus_tag=C9E94_RS00125;product=phosphoserine phosphatase;protein_id=WP_001132983.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	3002	4384	.	+	.	ID=gene-C9E94_RS00130;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=C9E94_RS00130;old_locus_tag=C9E94_00135
NZ_PYJR01000005.1	Protein Homology	CDS	3002	4384	.	+	0	ID=cds-WP_001029710.1;Parent=gene-C9E94_RS00130;Dbxref=GenBank:WP_001029710.1;Name=WP_001029710.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=C9E94_RS00130;product=DNA repair protein RadA;protein_id=WP_001029710.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	4535	5767	.	+	.	ID=gene-C9E94_RS00135;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=C9E94_RS00135;old_locus_tag=C9E94_00140
NZ_PYJR01000005.1	Protein Homology	CDS	4535	5767	.	+	0	ID=cds-WP_001532645.1;Parent=gene-C9E94_RS00135;Dbxref=GenBank:WP_001532645.1;Name=WP_001532645.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=C9E94_RS00135;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_001532645.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	5885	7552	.	-	.	ID=gene-C9E94_RS00140;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=C9E94_RS00140;old_locus_tag=C9E94_00145
NZ_PYJR01000005.1	Protein Homology	CDS	5885	7552	.	-	0	ID=cds-WP_000046770.1;Parent=gene-C9E94_RS00140;Dbxref=GenBank:WP_000046770.1;Name=WP_000046770.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=C9E94_RS00140;product=energy-dependent translational throttle protein EttA;protein_id=WP_000046770.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	7728	9698	.	+	.	ID=gene-C9E94_RS00145;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=C9E94_RS00145;old_locus_tag=C9E94_00155
NZ_PYJR01000005.1	Protein Homology	CDS	7728	9698	.	+	0	ID=cds-WP_440980428.1;Parent=gene-C9E94_RS00145;Dbxref=GenBank:WP_440980428.1;Name=WP_440980428.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155637.1;locus_tag=C9E94_RS00145;product=murein transglycosylase;protein_id=WP_440980428.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	9756	10082	.	+	.	ID=gene-C9E94_RS00150;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=C9E94_RS00150;old_locus_tag=C9E94_00160
NZ_PYJR01000005.1	Protein Homology	CDS	9756	10082	.	+	0	ID=cds-WP_000192003.1;Parent=gene-C9E94_RS00150;Dbxref=GenBank:WP_000192003.1;Name=WP_000192003.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463439.1;locus_tag=C9E94_RS00150;product=trp operon repressor;protein_id=WP_000192003.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	10184	10699	.	-	.	ID=gene-C9E94_RS00155;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=C9E94_RS00155;old_locus_tag=C9E94_00165
NZ_PYJR01000005.1	Protein Homology	CDS	10184	10699	.	-	0	ID=cds-WP_020437674.1;Parent=gene-C9E94_RS00155;Dbxref=GenBank:WP_020437674.1;Name=WP_020437674.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463440.1;locus_tag=C9E94_RS00155;product=inosine/xanthosine triphosphatase;protein_id=WP_020437674.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	10748	11395	.	+	.	ID=gene-C9E94_RS00160;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=C9E94_RS00160;old_locus_tag=C9E94_00170
NZ_PYJR01000005.1	Protein Homology	CDS	10748	11395	.	+	0	ID=cds-WP_000942363.1;Parent=gene-C9E94_RS00160;Dbxref=GenBank:WP_000942363.1;Name=WP_000942363.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463441.1;locus_tag=C9E94_RS00160;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_000942363.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	11392	12261	.	-	.	ID=gene-C9E94_RS00165;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=C9E94_RS00165;old_locus_tag=C9E94_00175
NZ_PYJR01000005.1	Protein Homology	CDS	11392	12261	.	-	0	ID=cds-WP_000371685.1;Parent=gene-C9E94_RS00165;Dbxref=GenBank:WP_000371685.1;Name=WP_000371685.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463442.1;locus_tag=C9E94_RS00165;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_000371685.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	12473	12946	.	+	.	ID=gene-C9E94_RS00170;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=C9E94_RS00170;old_locus_tag=C9E94_00180
NZ_PYJR01000005.1	Protein Homology	CDS	12473	12946	.	+	0	ID=cds-WP_000875811.1;Parent=gene-C9E94_RS00170;Dbxref=GenBank:WP_000875811.1;Name=WP_000875811.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463443.1;locus_tag=C9E94_RS00170;product=protein CreA;protein_id=WP_000875811.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	12959	13648	.	+	.	ID=gene-C9E94_RS00175;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=C9E94_RS00175;old_locus_tag=C9E94_00185
NZ_PYJR01000005.1	Protein Homology	CDS	12959	13648	.	+	0	ID=cds-WP_001187046.1;Parent=gene-C9E94_RS00175;Dbxref=GenBank:WP_001187046.1;Name=WP_001187046.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463444.1;locus_tag=C9E94_RS00175;product=two-component system response regulator CreB;protein_id=WP_001187046.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	13648	15072	.	+	.	ID=gene-C9E94_RS00180;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=C9E94_RS00180;old_locus_tag=C9E94_00190
NZ_PYJR01000005.1	Protein Homology	CDS	13648	15072	.	+	0	ID=cds-WP_017441769.1;Parent=gene-C9E94_RS00180;Dbxref=GenBank:WP_017441769.1;Name=WP_017441769.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463445.1;locus_tag=C9E94_RS00180;product=two-component system sensor histidine kinase CreC;protein_id=WP_017441769.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	15130	16479	.	+	.	ID=gene-C9E94_RS00185;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=C9E94_RS00185;old_locus_tag=C9E94_00195
NZ_PYJR01000005.1	Protein Homology	CDS	15130	16479	.	+	0	ID=cds-WP_000920383.1;Parent=gene-C9E94_RS00185;Dbxref=GenBank:WP_000920383.1;Name=WP_000920383.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463446.1;locus_tag=C9E94_RS00185;product=cell envelope integrity protein CreD;protein_id=WP_000920383.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	16537	17622	.	-	.	ID=gene-C9E94_RS00190;Name=sthE;gbkey=Gene;gene=sthE;gene_biotype=protein_coding;locus_tag=C9E94_RS00190;old_locus_tag=C9E94_00200
NZ_PYJR01000005.1	Protein Homology	CDS	16537	17622	.	-	0	ID=cds-WP_021001129.1;Parent=gene-C9E94_RS00190;Dbxref=GenBank:WP_021001129.1;Name=WP_021001129.1;gbkey=CDS;gene=sthE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463447.1;locus_tag=C9E94_RS00190;product=fimbrial major subunit SthE;protein_id=WP_021001129.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	17663	18220	.	-	.	ID=gene-C9E94_RS00195;Name=C9E94_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00195;old_locus_tag=C9E94_00205
NZ_PYJR01000005.1	Protein Homology	CDS	17663	18220	.	-	0	ID=cds-WP_135400724.1;Parent=gene-C9E94_RS00195;Dbxref=GenBank:WP_135400724.1;Name=WP_135400724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463448.1;locus_tag=C9E94_RS00195;product=fimbrial protein;protein_id=WP_135400724.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	18238	20775	.	-	.	ID=gene-C9E94_RS00200;Name=C9E94_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00200;old_locus_tag=C9E94_00210
NZ_PYJR01000005.1	Protein Homology	CDS	18238	20775	.	-	0	ID=cds-WP_135400725.1;Parent=gene-C9E94_RS00200;Dbxref=GenBank:WP_135400725.1;Name=WP_135400725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=C9E94_RS00200;product=fimbrial outer membrane usher protein;protein_id=WP_135400725.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	20821	21504	.	-	.	ID=gene-C9E94_RS00205;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=C9E94_RS00205;old_locus_tag=C9E94_00215
NZ_PYJR01000005.1	Protein Homology	CDS	20821	21504	.	-	0	ID=cds-WP_000680522.1;Parent=gene-C9E94_RS00205;Dbxref=GenBank:WP_000680522.1;Name=WP_000680522.1;gbkey=CDS;gene=sthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463450.1;locus_tag=C9E94_RS00205;product=fimbrial biogenesis chaperone SthA;protein_id=WP_000680522.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	21575	22120	.	-	.	ID=gene-C9E94_RS00210;Name=C9E94_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00210;old_locus_tag=C9E94_00220
NZ_PYJR01000005.1	Protein Homology	CDS	21575	22120	.	-	0	ID=cds-WP_000482239.1;Parent=gene-C9E94_RS00210;Dbxref=GenBank:WP_000482239.1;Name=WP_000482239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463451.1;locus_tag=C9E94_RS00210;product=fimbrial protein;protein_id=WP_000482239.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	22459	23130	.	-	.	ID=gene-C9E94_RS00215;Name=C9E94_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00215;old_locus_tag=C9E94_00225
NZ_PYJR01000005.1	Protein Homology	CDS	22459	23130	.	-	0	ID=cds-WP_000811635.1;Parent=gene-C9E94_RS00215;Dbxref=GenBank:WP_000811635.1;Name=WP_000811635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463452.1;locus_tag=C9E94_RS00215;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000811635.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	23514	23828	.	-	.	ID=gene-C9E94_RS00220;Name=C9E94_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00220;old_locus_tag=C9E94_00230
NZ_PYJR01000005.1	Protein Homology	CDS	23514	23828	.	-	0	ID=cds-WP_000749515.1;Parent=gene-C9E94_RS00220;Dbxref=GenBank:WP_000749515.1;Name=WP_000749515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463453.1;locus_tag=C9E94_RS00220;product=hypothetical protein;protein_id=WP_000749515.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	24095	24811	.	-	.	ID=gene-C9E94_RS00225;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=C9E94_RS00225;old_locus_tag=C9E94_00235
NZ_PYJR01000005.1	Protein Homology	CDS	24095	24811	.	-	0	ID=cds-WP_001194359.1;Parent=gene-C9E94_RS00225;Dbxref=GenBank:WP_001194359.1;Name=WP_001194359.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=C9E94_RS00225;product=two-component system response regulator ArcA;protein_id=WP_001194359.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	24907	25047	.	+	.	ID=gene-C9E94_RS00230;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=C9E94_RS00230;old_locus_tag=C9E94_00240
NZ_PYJR01000005.1	Protein Homology	CDS	24907	25047	.	+	0	ID=cds-WP_001541509.1;Parent=gene-C9E94_RS00230;Dbxref=GenBank:WP_001541509.1;Name=WP_001541509.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463455.1;locus_tag=C9E94_RS00230;product=protein YjjY;protein_id=WP_001541509.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	25447	26133	.	+	.	ID=gene-C9E94_RS00235;Name=C9E94_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00235;old_locus_tag=C9E94_00245
NZ_PYJR01000005.1	Protein Homology	CDS	25447	26133	.	+	0	ID=cds-WP_001266780.1;Parent=gene-C9E94_RS00235;Dbxref=GenBank:WP_001266780.1;Name=WP_001266780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463456.1;locus_tag=C9E94_RS00235;product=tRNA/rRNA methyltransferase;protein_id=WP_001266780.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	26347	26412	.	+	.	ID=gene-C9E94_RS00240;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=C9E94_RS00240;old_locus_tag=C9E94_00250
NZ_PYJR01000005.1	Protein Homology	CDS	26347	26412	.	+	0	ID=cds-WP_001575544.1;Parent=gene-C9E94_RS00240;Dbxref=GenBank:WP_001575544.1;Name=WP_001575544.1;Ontology_term=GO:0009088,GO:0031554,GO:0031556;gbkey=CDS;gene=thrL;go_process=threonine biosynthetic process|0009088||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459006.1;locus_tag=C9E94_RS00240;product=thr operon leader peptide;protein_id=WP_001575544.1;transl_table=11
NZ_PYJR01000005.1	cmsearch	sequence_feature	26348	26468	.	+	.	ID=id-NZ_PYJR01000005.1:26348..26468;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PYJR01000005.1	RefSeq	gene	26494	28956	.	+	.	ID=gene-C9E94_RS00245;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=C9E94_RS00245;old_locus_tag=C9E94_00255
NZ_PYJR01000005.1	Protein Homology	CDS	26494	28956	.	+	0	ID=cds-WP_001264681.1;Parent=gene-C9E94_RS00245;Dbxref=GenBank:WP_001264681.1;Name=WP_001264681.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=C9E94_RS00245;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_001264681.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	28958	29887	.	+	.	ID=gene-C9E94_RS00250;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=C9E94_RS00250;old_locus_tag=C9E94_00260
NZ_PYJR01000005.1	Protein Homology	CDS	28958	29887	.	+	0	ID=cds-WP_000241685.1;Parent=gene-C9E94_RS00250;Dbxref=GenBank:WP_000241685.1;Name=WP_000241685.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459008.1;locus_tag=C9E94_RS00250;product=homoserine kinase;protein_id=WP_000241685.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	29891	31177	.	+	.	ID=gene-C9E94_RS00255;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=C9E94_RS00255;old_locus_tag=C9E94_00265
NZ_PYJR01000005.1	Protein Homology	CDS	29891	31177	.	+	0	ID=cds-WP_000781110.1;Parent=gene-C9E94_RS00255;Dbxref=GenBank:WP_000781110.1;Name=WP_000781110.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459009.1;locus_tag=C9E94_RS00255;product=threonine synthase;protein_id=WP_000781110.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	31271	32044	.	-	.	ID=gene-C9E94_RS00260;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=C9E94_RS00260;old_locus_tag=C9E94_00270
NZ_PYJR01000005.1	Protein Homology	CDS	31271	32044	.	-	0	ID=cds-WP_000906175.1;Parent=gene-C9E94_RS00260;Dbxref=GenBank:WP_000906175.1;Name=WP_000906175.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459010.1;locus_tag=C9E94_RS00260;product=peroxide stress protein YaaA;protein_id=WP_000906175.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	32123	33553	.	-	.	ID=gene-C9E94_RS00265;Name=C9E94_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00265;old_locus_tag=C9E94_00275
NZ_PYJR01000005.1	Protein Homology	CDS	32123	33553	.	-	0	ID=cds-WP_023238147.1;Parent=gene-C9E94_RS00265;Dbxref=GenBank:WP_023238147.1;Name=WP_023238147.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459011.1;locus_tag=C9E94_RS00265;product=alanine/glycine:cation symporter family protein;protein_id=WP_023238147.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	33822	34775	.	+	.	ID=gene-C9E94_RS00270;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=C9E94_RS00270;old_locus_tag=C9E94_00280
NZ_PYJR01000005.1	Protein Homology	CDS	33822	34775	.	+	0	ID=cds-WP_000130175.1;Parent=gene-C9E94_RS00270;Dbxref=GenBank:WP_000130175.1;Name=WP_000130175.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459012.1;locus_tag=C9E94_RS00270;product=transaldolase;protein_id=WP_000130175.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	34886	35476	.	+	.	ID=gene-C9E94_RS00275;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=C9E94_RS00275;old_locus_tag=C9E94_00285
NZ_PYJR01000005.1	Protein Homology	CDS	34886	35476	.	+	0	ID=cds-WP_001094677.1;Parent=gene-C9E94_RS00275;Dbxref=GenBank:WP_001094677.1;Name=WP_001094677.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380375.1;locus_tag=C9E94_RS00275;product=molybdopterin adenylyltransferase;protein_id=WP_001094677.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	35533	36099	.	-	.	ID=gene-C9E94_RS00280;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=C9E94_RS00280;old_locus_tag=C9E94_00290
NZ_PYJR01000005.1	Protein Homology	CDS	35533	36099	.	-	0	ID=cds-WP_000528527.1;Parent=gene-C9E94_RS00280;Dbxref=GenBank:WP_000528527.1;Name=WP_000528527.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459014.1;locus_tag=C9E94_RS00280;product=acetate uptake transporter;protein_id=WP_000528527.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	36249	36962	.	-	.	ID=gene-C9E94_RS00285;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=C9E94_RS00285;old_locus_tag=C9E94_00295
NZ_PYJR01000005.1	Protein Homology	CDS	36249	36962	.	-	0	ID=cds-WP_001103477.1;Parent=gene-C9E94_RS00285;Dbxref=GenBank:WP_001103477.1;Name=WP_001103477.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459015.1;locus_tag=C9E94_RS00285;product=acidic protein MsyB;protein_id=WP_001103477.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	36998	37402	.	-	.	ID=gene-C9E94_RS00290;Name=C9E94_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00290;old_locus_tag=C9E94_00300
NZ_PYJR01000005.1	Protein Homology	CDS	36998	37402	.	-	0	ID=cds-WP_001258090.1;Parent=gene-C9E94_RS00290;Dbxref=GenBank:WP_001258090.1;Name=WP_001258090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459016.1;locus_tag=C9E94_RS00290;product=DUF2541 family protein;protein_id=WP_001258090.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	37751	39667	.	+	.	ID=gene-C9E94_RS00295;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=C9E94_RS00295;old_locus_tag=C9E94_00305
NZ_PYJR01000005.1	Protein Homology	CDS	37751	39667	.	+	0	ID=cds-WP_000516126.1;Parent=gene-C9E94_RS00295;Dbxref=GenBank:WP_000516126.1;Name=WP_000516126.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=C9E94_RS00295;product=molecular chaperone DnaK;protein_id=WP_000516126.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	39753	40892	.	+	.	ID=gene-C9E94_RS00300;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=C9E94_RS00300;old_locus_tag=C9E94_00310
NZ_PYJR01000005.1	Protein Homology	CDS	39753	40892	.	+	0	ID=cds-WP_001119009.1;Parent=gene-C9E94_RS00300;Dbxref=GenBank:WP_001119009.1;Name=WP_001119009.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459018.1;locus_tag=C9E94_RS00300;product=molecular chaperone DnaJ;protein_id=WP_001119009.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	41172	42119	.	+	.	ID=gene-C9E94_RS00305;Name=C9E94_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00305;old_locus_tag=C9E94_00315
NZ_PYJR01000005.1	Protein Homology	CDS	41172	42119	.	+	0	ID=cds-WP_000534907.1;Parent=gene-C9E94_RS00305;Dbxref=GenBank:WP_000534907.1;Name=WP_000534907.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459019.1;locus_tag=C9E94_RS00305;product=LysR family transcriptional regulator;protein_id=WP_000534907.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	42246	42590	.	+	.	ID=gene-C9E94_RS00310;Name=C9E94_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00310;old_locus_tag=C9E94_00320
NZ_PYJR01000005.1	Protein Homology	CDS	42246	42590	.	+	0	ID=cds-WP_000026889.1;Parent=gene-C9E94_RS00310;Dbxref=GenBank:WP_000026889.1;Name=WP_000026889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459020.1;locus_tag=C9E94_RS00310;product=phage holin family protein;protein_id=WP_000026889.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	42651	43184	.	-	.	ID=gene-C9E94_RS00315;Name=C9E94_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00315;old_locus_tag=C9E94_00325
NZ_PYJR01000005.1	Protein Homology	CDS	42651	43184	.	-	0	ID=cds-WP_001068132.1;Parent=gene-C9E94_RS00315;Dbxref=GenBank:WP_001068132.1;Name=WP_001068132.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459021.1;locus_tag=C9E94_RS00315;product=glycoside hydrolase family 108 protein;protein_id=WP_001068132.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	43201	43644	.	-	.	ID=gene-C9E94_RS00320;Name=C9E94_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00320;old_locus_tag=C9E94_00330
NZ_PYJR01000005.1	Protein Homology	CDS	43201	43644	.	-	0	ID=cds-WP_000860681.1;Parent=gene-C9E94_RS00320;Dbxref=GenBank:WP_000860681.1;Name=WP_000860681.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459022.1;locus_tag=C9E94_RS00320;product=winged helix-turn-helix domain-containing protein;protein_id=WP_000860681.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	44025	46124	.	+	.	ID=gene-C9E94_RS00325;Name=C9E94_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00325;old_locus_tag=C9E94_00335
NZ_PYJR01000005.1	Protein Homology	CDS	44025	46124	.	+	0	ID=cds-WP_000235798.1;Parent=gene-C9E94_RS00325;Dbxref=GenBank:WP_000235798.1;Name=WP_000235798.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459023.1;locus_tag=C9E94_RS00325;product=glycosyl hydrolase family 18 protein;protein_id=WP_000235798.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	46216	49212	.	+	.	ID=gene-C9E94_RS00330;Name=C9E94_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00330;old_locus_tag=C9E94_00340
NZ_PYJR01000005.1	Protein Homology	CDS	46216	49212	.	+	0	ID=cds-WP_135400726.1;Parent=gene-C9E94_RS00330;Dbxref=GenBank:WP_135400726.1;Name=WP_135400726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459024.1;locus_tag=C9E94_RS00330;product=chitinase;protein_id=WP_135400726.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	49493	50197	.	+	.	ID=gene-C9E94_RS00335;Name=C9E94_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00335;old_locus_tag=C9E94_00345
NZ_PYJR01000005.1	Protein Homology	CDS	49493	50197	.	+	0	ID=cds-WP_000738617.1;Parent=gene-C9E94_RS00335;Dbxref=GenBank:WP_000738617.1;Name=WP_000738617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459025.1;locus_tag=C9E94_RS00335;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000738617.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	50627	51169	.	+	.	ID=gene-C9E94_RS00340;Name=C9E94_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00340;old_locus_tag=C9E94_00350
NZ_PYJR01000005.1	Protein Homology	CDS	50627	51169	.	+	0	ID=cds-WP_000743357.1;Parent=gene-C9E94_RS00340;Dbxref=GenBank:WP_000743357.1;Name=WP_000743357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459026.1;locus_tag=C9E94_RS00340;product=fimbrial protein BcfA;protein_id=WP_000743357.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	51270	51956	.	+	.	ID=gene-C9E94_RS00345;Name=bcfB;gbkey=Gene;gene=bcfB;gene_biotype=protein_coding;locus_tag=C9E94_RS00345;old_locus_tag=C9E94_00355
NZ_PYJR01000005.1	Protein Homology	CDS	51270	51956	.	+	0	ID=cds-WP_135400727.1;Parent=gene-C9E94_RS00345;Dbxref=GenBank:WP_135400727.1;Name=WP_135400727.1;gbkey=CDS;gene=bcfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459027.1;locus_tag=C9E94_RS00345;product=fimbrial biogenesis chaperone BcfB;protein_id=WP_135400727.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	51961	54582	.	+	.	ID=gene-C9E94_RS00350;Name=bcfC;gbkey=Gene;gene=bcfC;gene_biotype=protein_coding;locus_tag=C9E94_RS00350;old_locus_tag=C9E94_00360
NZ_PYJR01000005.1	Protein Homology	CDS	51961	54582	.	+	0	ID=cds-WP_135400734.1;Parent=gene-C9E94_RS00350;Dbxref=GenBank:WP_135400734.1;Name=WP_135400734.1;gbkey=CDS;gene=bcfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459028.1;locus_tag=C9E94_RS00350;product=fimbrial usher BcfC;protein_id=WP_135400734.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	54583	55590	.	+	.	ID=gene-C9E94_RS00355;Name=C9E94_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00355;old_locus_tag=C9E94_00365
NZ_PYJR01000005.1	Protein Homology	CDS	54583	55590	.	+	0	ID=cds-WP_000701237.1;Parent=gene-C9E94_RS00355;Dbxref=GenBank:WP_000701237.1;Name=WP_000701237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459029.1;locus_tag=C9E94_RS00355;product=fimbrial protein BcfD;protein_id=WP_000701237.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	55591	56136	.	+	.	ID=gene-C9E94_RS00360;Name=C9E94_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00360;old_locus_tag=C9E94_00370
NZ_PYJR01000005.1	Protein Homology	CDS	55591	56136	.	+	0	ID=cds-WP_001082038.1;Parent=gene-C9E94_RS00360;Dbxref=GenBank:WP_001082038.1;Name=WP_001082038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459030.1;locus_tag=C9E94_RS00360;product=fimbrial protein BcfE;protein_id=WP_001082038.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	56152	56670	.	+	.	ID=gene-C9E94_RS00365;Name=C9E94_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00365;old_locus_tag=C9E94_00375
NZ_PYJR01000005.1	Protein Homology	CDS	56152	56670	.	+	0	ID=cds-WP_020898357.1;Parent=gene-C9E94_RS00365;Dbxref=GenBank:WP_020898357.1;Name=WP_020898357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459031.1;locus_tag=C9E94_RS00365;product=fimbrial protein BcfF;protein_id=WP_020898357.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	56636	57367	.	+	.	ID=gene-C9E94_RS00370;Name=bcfG;gbkey=Gene;gene=bcfG;gene_biotype=protein_coding;locus_tag=C9E94_RS00370;old_locus_tag=C9E94_00380
NZ_PYJR01000005.1	Protein Homology	CDS	56636	57367	.	+	0	ID=cds-WP_135400728.1;Parent=gene-C9E94_RS00370;Dbxref=GenBank:WP_135400728.1;Name=WP_135400728.1;gbkey=CDS;gene=bcfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459032.1;locus_tag=C9E94_RS00370;product=fimbrial chaperone BcfG;protein_id=WP_135400728.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	57432	58280	.	+	.	ID=gene-C9E94_RS00375;Name=C9E94_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00375;old_locus_tag=C9E94_00385
NZ_PYJR01000005.1	Protein Homology	CDS	57432	58280	.	+	0	ID=cds-WP_135400729.1;Parent=gene-C9E94_RS00375;Dbxref=GenBank:WP_135400729.1;Name=WP_135400729.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459033.1;locus_tag=C9E94_RS00375;product=DsbA family protein;protein_id=WP_135400729.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	58319	58606	.	+	.	ID=gene-C9E94_RS00380;Name=C9E94_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00380;old_locus_tag=C9E94_00390
NZ_PYJR01000005.1	Protein Homology	CDS	58319	58606	.	+	0	ID=cds-WP_000839833.1;Parent=gene-C9E94_RS00380;Dbxref=GenBank:WP_000839833.1;Name=WP_000839833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000839835.1;locus_tag=C9E94_RS00380;product=hypothetical protein;protein_id=WP_000839833.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	58706	59155	.	-	.	ID=gene-C9E94_RS00385;Name=C9E94_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00385;old_locus_tag=C9E94_00395
NZ_PYJR01000005.1	Protein Homology	CDS	58706	59155	.	-	0	ID=cds-WP_135400730.1;Parent=gene-C9E94_RS00385;Dbxref=GenBank:WP_135400730.1;Name=WP_135400730.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459034.1;locus_tag=C9E94_RS00385;product=winged helix-turn-helix domain-containing protein;protein_id=WP_135400730.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	59903	60094	.	+	.	ID=gene-C9E94_RS00390;Name=C9E94_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00390;old_locus_tag=C9E94_00400
NZ_PYJR01000005.1	GeneMarkS-2+	CDS	59903	60094	.	+	0	ID=cds-WP_012218477.1;Parent=gene-C9E94_RS00390;Dbxref=GenBank:WP_012218477.1;Name=WP_012218477.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS00390;product=hypothetical protein;protein_id=WP_012218477.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	pseudogene	60232	60629	.	-	.	ID=gene-C9E94_RS00395;Name=C9E94_RS00395;end_range=60629,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS00395;old_locus_tag=C9E94_00405;partial=true;pseudo=true
NZ_PYJR01000005.1	Protein Homology	CDS	60232	60629	.	-	0	ID=cds-C9E94_RS00395;Parent=gene-C9E94_RS00395;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009166,GO:0016787;end_range=60629,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459038.1;locus_tag=C9E94_RS00395;partial=true;product=5'-nucleotidase C-terminal domain-containing protein;pseudo=true;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	61070	61834	.	+	.	ID=gene-C9E94_RS00400;Name=C9E94_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00400;old_locus_tag=C9E94_00410
NZ_PYJR01000005.1	Protein Homology	CDS	61070	61834	.	+	0	ID=cds-WP_000052612.1;Parent=gene-C9E94_RS00400;Dbxref=GenBank:WP_000052612.1;Name=WP_000052612.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052612.1;locus_tag=C9E94_RS00400;product=outer membrane protein OmpK;protein_id=WP_000052612.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	61855	63348	.	+	.	ID=gene-C9E94_RS00405;Name=C9E94_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00405;old_locus_tag=C9E94_00415
NZ_PYJR01000005.1	Protein Homology	CDS	61855	63348	.	+	0	ID=cds-WP_135400731.1;Parent=gene-C9E94_RS00405;Dbxref=GenBank:WP_135400731.1;Name=WP_135400731.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459040.1;locus_tag=C9E94_RS00405;product=sulfatase family protein;protein_id=WP_135400731.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	63452	64648	.	+	.	ID=gene-C9E94_RS00410;Name=C9E94_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00410;old_locus_tag=C9E94_00420
NZ_PYJR01000005.1	Protein Homology	CDS	63452	64648	.	+	0	ID=cds-WP_001189145.1;Parent=gene-C9E94_RS00410;Dbxref=GenBank:WP_001189145.1;Name=WP_001189145.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519625.1;locus_tag=C9E94_RS00410;product=anaerobic sulfatase maturase;protein_id=WP_001189145.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	64666	65919	.	+	.	ID=gene-C9E94_RS00415;Name=C9E94_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00415;old_locus_tag=C9E94_00425
NZ_PYJR01000005.1	Protein Homology	CDS	64666	65919	.	+	0	ID=cds-WP_000457885.1;Parent=gene-C9E94_RS00415;Dbxref=GenBank:WP_000457885.1;Name=WP_000457885.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457886.1;locus_tag=C9E94_RS00415;product=IS1/IS1595 family N-terminal zinc-binding domain-containing protein;protein_id=WP_000457885.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	66038	66295	.	+	.	ID=gene-C9E94_RS00420;Name=C9E94_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00420;old_locus_tag=C9E94_00430
NZ_PYJR01000005.1	Protein Homology	CDS	66038	66295	.	+	0	ID=cds-WP_135400732.1;Parent=gene-C9E94_RS00420;Dbxref=GenBank:WP_135400732.1;Name=WP_135400732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528979.1;locus_tag=C9E94_RS00420;product=aryl sulfotransferase;protein_id=WP_135400732.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	pseudogene	66217	66444	.	+	.	ID=gene-C9E94_RS00425;Name=C9E94_RS00425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS00425;old_locus_tag=C9E94_00435;partial=true;pseudo=true;start_range=.,66217
NZ_PYJR01000005.1	Protein Homology	CDS	66217	66444	.	+	0	ID=cds-C9E94_RS00425;Parent=gene-C9E94_RS00425;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459043.1;locus_tag=C9E94_RS00425;partial=true;product=aryl-sulfate sulfotransferase;pseudo=true;start_range=.,66217;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	66607	67773	.	+	.	ID=gene-C9E94_RS00430;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=C9E94_RS00430;old_locus_tag=C9E94_00440
NZ_PYJR01000005.1	Protein Homology	CDS	66607	67773	.	+	0	ID=cds-WP_000681340.1;Parent=gene-C9E94_RS00430;Dbxref=GenBank:WP_000681340.1;Name=WP_000681340.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459044.1;locus_tag=C9E94_RS00430;product=Na+/H+ antiporter NhaA;protein_id=WP_000681340.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	67835	68734	.	+	.	ID=gene-C9E94_RS00435;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=C9E94_RS00435;old_locus_tag=C9E94_00445
NZ_PYJR01000005.1	Protein Homology	CDS	67835	68734	.	+	0	ID=cds-WP_000062872.1;Parent=gene-C9E94_RS00435;Dbxref=GenBank:WP_000062872.1;Name=WP_000062872.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459045.1;locus_tag=C9E94_RS00435;product=transcriptional activator NhaR;protein_id=WP_000062872.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	68789	70828	.	-	.	ID=gene-C9E94_RS00440;Name=C9E94_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00440;old_locus_tag=C9E94_00450
NZ_PYJR01000005.1	Protein Homology	CDS	68789	70828	.	-	0	ID=cds-WP_023259621.1;Parent=gene-C9E94_RS00440;Dbxref=GenBank:WP_023259621.1;Name=WP_023259621.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459046.1;locus_tag=C9E94_RS00440;product=glycoside hydrolase family 31 protein;protein_id=WP_023259621.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	70868	72241	.	-	.	ID=gene-C9E94_RS00445;Name=C9E94_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00445;old_locus_tag=C9E94_00455
NZ_PYJR01000005.1	Protein Homology	CDS	70868	72241	.	-	0	ID=cds-WP_135400733.1;Parent=gene-C9E94_RS00445;Dbxref=GenBank:WP_135400733.1;Name=WP_135400733.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459047.1;locus_tag=C9E94_RS00445;product=MFS transporter;protein_id=WP_135400733.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	72697	72960	.	-	.	ID=gene-C9E94_RS00450;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=C9E94_RS00450;old_locus_tag=C9E94_00460
NZ_PYJR01000005.1	Protein Homology	CDS	72697	72960	.	-	0	ID=cds-WP_001518655.1;Parent=gene-C9E94_RS00450;Dbxref=GenBank:WP_001518655.1;Name=WP_001518655.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=C9E94_RS00450;product=30S ribosomal protein S20;protein_id=WP_001518655.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	73066	73281	.	+	.	ID=gene-C9E94_RS00455;Name=C9E94_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00455;old_locus_tag=C9E94_00465
NZ_PYJR01000005.1	Protein Homology	CDS	73066	73281	.	+	0	ID=cds-WP_001575565.1;Parent=gene-C9E94_RS00455;Dbxref=GenBank:WP_001575565.1;Name=WP_001575565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459049.1;locus_tag=C9E94_RS00455;product=YaaY family protein;protein_id=WP_001575565.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	73289	74227	.	+	.	ID=gene-C9E94_RS00460;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=C9E94_RS00460;old_locus_tag=C9E94_00470
NZ_PYJR01000005.1	Protein Homology	CDS	73289	74227	.	+	0	ID=cds-WP_000767311.1;Parent=gene-C9E94_RS00460;Dbxref=GenBank:WP_000767311.1;Name=WP_000767311.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459050.1;locus_tag=C9E94_RS00460;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000767311.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	74272	77106	.	+	.	ID=gene-C9E94_RS00465;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=C9E94_RS00465;old_locus_tag=C9E94_00475
NZ_PYJR01000005.1	Protein Homology	CDS	74272	77106	.	+	0	ID=cds-WP_001674865.1;Parent=gene-C9E94_RS00465;Dbxref=GenBank:WP_001674865.1;Name=WP_001674865.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459051.1;locus_tag=C9E94_RS00465;product=isoleucine--tRNA ligase;protein_id=WP_001674865.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	77106	77606	.	+	.	ID=gene-C9E94_RS00470;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=C9E94_RS00470;old_locus_tag=C9E94_00480
NZ_PYJR01000005.1	Protein Homology	CDS	77106	77606	.	+	0	ID=cds-WP_000042736.1;Parent=gene-C9E94_RS00470;Dbxref=GenBank:WP_000042736.1;Name=WP_000042736.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459052.1;locus_tag=C9E94_RS00470;product=signal peptidase II;protein_id=WP_000042736.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	77761	78210	.	+	.	ID=gene-C9E94_RS00475;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=C9E94_RS00475;old_locus_tag=C9E94_00485
NZ_PYJR01000005.1	Protein Homology	CDS	77761	78210	.	+	0	ID=cds-WP_000047269.1;Parent=gene-C9E94_RS00475;Dbxref=GenBank:WP_000047269.1;Name=WP_000047269.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459053.1;locus_tag=C9E94_RS00475;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000047269.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	78213	79163	.	+	.	ID=gene-C9E94_RS00480;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=C9E94_RS00480;old_locus_tag=C9E94_00490
NZ_PYJR01000005.1	Protein Homology	CDS	78213	79163	.	+	0	ID=cds-WP_001166422.1;Parent=gene-C9E94_RS00480;Dbxref=GenBank:WP_001166422.1;Name=WP_001166422.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=C9E94_RS00480;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166422.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	79363	80565	.	+	.	ID=gene-C9E94_RS00485;Name=C9E94_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00485;old_locus_tag=C9E94_00495
NZ_PYJR01000005.1	Protein Homology	CDS	79363	80565	.	+	0	ID=cds-WP_023236847.1;Parent=gene-C9E94_RS00485;Dbxref=GenBank:WP_023236847.1;Name=WP_023236847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459055.1;locus_tag=C9E94_RS00485;product=XAC2610-related protein;protein_id=WP_023236847.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	80581	81501	.	+	.	ID=gene-C9E94_RS00490;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=C9E94_RS00490;old_locus_tag=C9E94_00500
NZ_PYJR01000005.1	Protein Homology	CDS	80581	81501	.	+	0	ID=cds-WP_000127279.1;Parent=gene-C9E94_RS00490;Dbxref=GenBank:WP_000127279.1;Name=WP_000127279.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459056.1;locus_tag=C9E94_RS00490;product=ribonucleoside hydrolase RihC;protein_id=WP_000127279.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	81523	82209	.	-	.	ID=gene-C9E94_RS00495;Name=citB;gbkey=Gene;gene=citB;gene_biotype=protein_coding;locus_tag=C9E94_RS00495;old_locus_tag=C9E94_00505
NZ_PYJR01000005.1	Protein Homology	CDS	81523	82209	.	-	0	ID=cds-WP_000377415.1;Parent=gene-C9E94_RS00495;Dbxref=GenBank:WP_000377415.1;Name=WP_000377415.1;gbkey=CDS;gene=citB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459057.1;locus_tag=C9E94_RS00495;product=citrate response regulator transcription factor CitB;protein_id=WP_000377415.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	82211	83830	.	-	.	ID=gene-C9E94_RS00500;Name=citA;gbkey=Gene;gene=citA;gene_biotype=protein_coding;locus_tag=C9E94_RS00500;old_locus_tag=C9E94_00510
NZ_PYJR01000005.1	Protein Homology	CDS	82211	83830	.	-	0	ID=cds-WP_023194337.1;Parent=gene-C9E94_RS00500;Dbxref=GenBank:WP_023194337.1;Name=WP_023194337.1;gbkey=CDS;gene=citA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459058.1;locus_tag=C9E94_RS00500;product=citrate sensor histidine kinase CitA;protein_id=WP_023194337.1;transl_table=11
NZ_PYJR01000005.1	RefSeq	gene	83965	84092	.	-	.	ID=gene-C9E94_RS00505;Name=C9E94_RS00505;end_range=84092,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00505;old_locus_tag=C9E94_00515;partial=true
NZ_PYJR01000005.1	Protein Homology	CDS	83965	84092	.	-	2	ID=cds-WP_137962777.1;Parent=gene-C9E94_RS00505;Dbxref=GenBank:WP_137962777.1;Name=WP_137962777.1;Ontology_term=GO:0006814,GO:0016829;end_range=84092,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462261.1;locus_tag=C9E94_RS00505;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_137962777.1;transl_table=11
##sequence-region NZ_PYJR01000112.1 1 83832
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000112.1	RefSeq	region	1	83832	.	+	.	ID=NZ_PYJR01000112.1:1..83832;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000112.1	RefSeq	pseudogene	1	160	.	-	.	ID=gene-C9E94_RS23505;Name=C9E94_RS23505;end_range=160,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23505;partial=true;pseudo=true;start_range=.,1
NZ_PYJR01000112.1	Protein Homology	CDS	1	160	.	-	0	ID=cds-C9E94_RS23505;Parent=gene-C9E94_RS23505;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=160,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461523.1;locus_tag=C9E94_RS23505;partial=true;product=macro domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYJR01000112.1	RefSeq	pseudogene	152	376	.	-	.	ID=gene-C9E94_RS23690;Name=C9E94_RS23690;end_range=376,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23690;old_locus_tag=C9E94_16980;partial=true;pseudo=true;start_range=.,152
NZ_PYJR01000112.1	Protein Homology	CDS	152	376	.	-	0	ID=cds-C9E94_RS23690;Parent=gene-C9E94_RS23690;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=376,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461524.1;locus_tag=C9E94_RS23690;partial=true;product=tail fiber protein;pseudo=true;start_range=.,152;transl_table=11
NZ_PYJR01000112.1	RefSeq	pseudogene	369	629	.	-	.	ID=gene-C9E94_RS16595;Name=C9E94_RS16595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS16595;old_locus_tag=C9E94_16985;partial=true;pseudo=true;start_range=.,369
NZ_PYJR01000112.1	Protein Homology	CDS	369	629	.	-	0	ID=cds-C9E94_RS16595;Parent=gene-C9E94_RS16595;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459886.1;locus_tag=C9E94_RS16595;partial=true;product=DUF1441 family protein;pseudo=true;start_range=.,369;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	684	872	.	+	.	ID=gene-C9E94_RS16600;Name=C9E94_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16600;old_locus_tag=C9E94_16990
NZ_PYJR01000112.1	Protein Homology	CDS	684	872	.	+	0	ID=cds-WP_001034748.1;Parent=gene-C9E94_RS16600;Dbxref=GenBank:WP_001034748.1;Name=WP_001034748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537366.1;locus_tag=C9E94_RS16600;product=hypothetical protein;protein_id=WP_001034748.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	937	1104	.	+	.	ID=gene-C9E94_RS16605;Name=C9E94_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16605;old_locus_tag=C9E94_16995
NZ_PYJR01000112.1	Protein Homology	CDS	937	1104	.	+	0	ID=cds-WP_000789530.1;Parent=gene-C9E94_RS16605;Dbxref=GenBank:WP_000789530.1;Name=WP_000789530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460824.1;locus_tag=C9E94_RS16605;product=lytic enzyme;protein_id=WP_000789530.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	1361	1894	.	-	.	ID=gene-C9E94_RS16610;Name=C9E94_RS16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16610;old_locus_tag=C9E94_17000
NZ_PYJR01000112.1	Protein Homology	CDS	1361	1894	.	-	0	ID=cds-WP_023256014.1;Parent=gene-C9E94_RS16610;Dbxref=GenBank:WP_023256014.1;Name=WP_023256014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460825.1;locus_tag=C9E94_RS16610;product=DUF2514 domain-containing protein;protein_id=WP_023256014.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	pseudogene	1948	2139	.	-	.	ID=gene-C9E94_RS16615;Name=C9E94_RS16615;end_range=2139,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS16615;old_locus_tag=C9E94_17005;partial=true;pseudo=true
NZ_PYJR01000112.1	Protein Homology	CDS	1948	2139	.	-	0	ID=cds-C9E94_RS16615;Parent=gene-C9E94_RS16615;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2139,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459884.1;locus_tag=C9E94_RS16615;partial=true;product=glycoside hydrolase family 19 protein;pseudo=true;transl_table=11
NZ_PYJR01000112.1	RefSeq	pseudogene	2128	3282	.	+	.	ID=gene-C9E94_RS16620;Name=C9E94_RS16620;end_range=3282,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS16620;old_locus_tag=C9E94_17010;partial=true;pseudo=true;start_range=.,2128
NZ_PYJR01000112.1	Protein Homology	CDS	2128	3282	.	+	0	ID=cds-C9E94_RS16620;Parent=gene-C9E94_RS16620;Note=The RecE (also known as exonuclease VIII) pathway is an alternative pathway for the initiation of homologous recombination in Escherichia coli. The RecE pathway is activated in recB%2C recC sbcA (suppressors of recB and recC) mutants. Activation of the RecE pathway results in the production of at least two phage proteins relevant for recombinational repair. RecE is a duplex DNA-specific exonuclease which produces 3' overhangs in duplex DNA by preferentially degrading the 5'-ending strands. Recombinational repair of E.coli chromosomal DNA involves as well other proteins: RecA%2C RecF%2C RecJ%2C RecO%2C RecR%2C and RuvC.%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3282,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023732.1;locus_tag=C9E94_RS16620;partial=true;product=exonuclease VIII;pseudo=true;start_range=.,2128;transl_table=11
NZ_PYJR01000112.1	RefSeq	pseudogene	3312	4390	.	+	.	ID=gene-C9E94_RS16625;Name=C9E94_RS16625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS16625;old_locus_tag=C9E94_17015;pseudo=true
NZ_PYJR01000112.1	Protein Homology	CDS	3312	4390	.	+	0	ID=cds-C9E94_RS16625;Parent=gene-C9E94_RS16625;Note=frameshifted;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=C9E94_RS16625;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	4754	5107	.	-	.	ID=gene-C9E94_RS16630;Name=C9E94_RS16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16630;old_locus_tag=C9E94_17025
NZ_PYJR01000112.1	Protein Homology	CDS	4754	5107	.	-	0	ID=cds-WP_000722368.1;Parent=gene-C9E94_RS16630;Dbxref=GenBank:WP_000722368.1;Name=WP_000722368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460830.1;locus_tag=C9E94_RS16630;product=YebY family protein;protein_id=WP_000722368.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	5124	5999	.	-	.	ID=gene-C9E94_RS16635;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=C9E94_RS16635;old_locus_tag=C9E94_17030
NZ_PYJR01000112.1	Protein Homology	CDS	5124	5999	.	-	0	ID=cds-WP_094889158.1;Parent=gene-C9E94_RS16635;Dbxref=GenBank:WP_094889158.1;Name=WP_094889158.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460831.1;locus_tag=C9E94_RS16635;product=copper homeostasis membrane protein CopD;protein_id=WP_094889158.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	6000	6374	.	-	.	ID=gene-C9E94_RS16640;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=C9E94_RS16640;old_locus_tag=C9E94_17035
NZ_PYJR01000112.1	Protein Homology	CDS	6000	6374	.	-	0	ID=cds-WP_094889159.1;Parent=gene-C9E94_RS16640;Dbxref=GenBank:WP_094889159.1;Name=WP_094889159.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460832.1;locus_tag=C9E94_RS16640;product=CopC domain-containing protein YobA;protein_id=WP_094889159.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	6512	6742	.	+	.	ID=gene-C9E94_RS16645;Name=C9E94_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16645;old_locus_tag=C9E94_17040
NZ_PYJR01000112.1	Protein Homology	CDS	6512	6742	.	+	0	ID=cds-WP_000856224.1;Parent=gene-C9E94_RS16645;Dbxref=GenBank:WP_000856224.1;Name=WP_000856224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460833.1;locus_tag=C9E94_RS16645;product=DNA polymerase III subunit theta;protein_id=WP_000856224.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	6850	7506	.	+	.	ID=gene-C9E94_RS16650;Name=C9E94_RS16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16650;old_locus_tag=C9E94_17045
NZ_PYJR01000112.1	Protein Homology	CDS	6850	7506	.	+	0	ID=cds-WP_000100249.1;Parent=gene-C9E94_RS16650;Dbxref=GenBank:WP_000100249.1;Name=WP_000100249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460834.1;locus_tag=C9E94_RS16650;product=carbon-nitrogen hydrolase family protein;protein_id=WP_000100249.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	7530	8228	.	+	.	ID=gene-C9E94_RS16655;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=C9E94_RS16655;old_locus_tag=C9E94_17050
NZ_PYJR01000112.1	Protein Homology	CDS	7530	8228	.	+	0	ID=cds-WP_000944287.1;Parent=gene-C9E94_RS16655;Dbxref=GenBank:WP_000944287.1;Name=WP_000944287.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460835.1;locus_tag=C9E94_RS16655;product=exodeoxyribonuclease X;protein_id=WP_000944287.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	8265	10316	.	-	.	ID=gene-C9E94_RS16660;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=C9E94_RS16660;old_locus_tag=C9E94_17055
NZ_PYJR01000112.1	Protein Homology	CDS	8265	10316	.	-	0	ID=cds-WP_135401139.1;Parent=gene-C9E94_RS16660;Dbxref=GenBank:WP_135401139.1;Name=WP_135401139.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460836.1;locus_tag=C9E94_RS16660;product=oligopeptidase B;protein_id=WP_135401139.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	10529	11188	.	-	.	ID=gene-C9E94_RS16665;Name=C9E94_RS16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16665;old_locus_tag=C9E94_17060
NZ_PYJR01000112.1	Protein Homology	CDS	10529	11188	.	-	0	ID=cds-WP_000024706.1;Parent=gene-C9E94_RS16665;Dbxref=GenBank:WP_000024706.1;Name=WP_000024706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460837.1;locus_tag=C9E94_RS16665;product=tellurite resistance TerB family protein;protein_id=WP_000024706.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	11282	11635	.	-	.	ID=gene-C9E94_RS16670;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=C9E94_RS16670;old_locus_tag=C9E94_17065
NZ_PYJR01000112.1	Protein Homology	CDS	11282	11635	.	-	0	ID=cds-WP_001042119.1;Parent=gene-C9E94_RS16670;Dbxref=GenBank:WP_001042119.1;Name=WP_001042119.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460838.1;locus_tag=C9E94_RS16670;product=protein YebF;protein_id=WP_001042119.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	11703	11993	.	-	.	ID=gene-C9E94_RS16675;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=C9E94_RS16675;old_locus_tag=C9E94_17070
NZ_PYJR01000112.1	Protein Homology	CDS	11703	11993	.	-	0	ID=cds-WP_000257723.1;Parent=gene-C9E94_RS16675;Dbxref=GenBank:WP_000257723.1;Name=WP_000257723.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460839.1;locus_tag=C9E94_RS16675;product=DNA damage-inducible protein YebG;protein_id=WP_000257723.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	12124	13302	.	+	.	ID=gene-C9E94_RS16680;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=C9E94_RS16680;old_locus_tag=C9E94_17075
NZ_PYJR01000112.1	Protein Homology	CDS	12124	13302	.	+	0	ID=cds-WP_000173431.1;Parent=gene-C9E94_RS16680;Dbxref=GenBank:WP_000173431.1;Name=WP_000173431.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460840.1;locus_tag=C9E94_RS16680;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_000173431.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	13402	14043	.	-	.	ID=gene-C9E94_RS16685;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=C9E94_RS16685;old_locus_tag=C9E94_17080
NZ_PYJR01000112.1	Protein Homology	CDS	13402	14043	.	-	0	ID=cds-WP_000800497.1;Parent=gene-C9E94_RS16685;Dbxref=GenBank:WP_000800497.1;Name=WP_000800497.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460841.1;locus_tag=C9E94_RS16685;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000800497.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	14081	15892	.	-	.	ID=gene-C9E94_RS16690;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=C9E94_RS16690;old_locus_tag=C9E94_17085
NZ_PYJR01000112.1	Protein Homology	CDS	14081	15892	.	-	0	ID=cds-WP_001069113.1;Parent=gene-C9E94_RS16690;Dbxref=GenBank:WP_001069113.1;Name=WP_001069113.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460842.1;locus_tag=C9E94_RS16690;product=phosphogluconate dehydratase;protein_id=WP_001069113.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	16127	17602	.	-	.	ID=gene-C9E94_RS16695;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=C9E94_RS16695;old_locus_tag=C9E94_17090
NZ_PYJR01000112.1	Protein Homology	CDS	16127	17602	.	-	0	ID=cds-WP_000301711.1;Parent=gene-C9E94_RS16695;Dbxref=GenBank:WP_000301711.1;Name=WP_000301711.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=C9E94_RS16695;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000301711.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	17944	18813	.	+	.	ID=gene-C9E94_RS16705;Name=C9E94_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16705;old_locus_tag=C9E94_17100
NZ_PYJR01000112.1	Protein Homology	CDS	17944	18813	.	+	0	ID=cds-WP_023194353.1;Parent=gene-C9E94_RS16705;Dbxref=GenBank:WP_023194353.1;Name=WP_023194353.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700,GO:0097367;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,carbohydrate derivative binding|0097367||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460844.1;locus_tag=C9E94_RS16705;product=MurR/RpiR family transcriptional regulator;protein_id=WP_023194353.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	18937	20379	.	+	.	ID=gene-C9E94_RS16710;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=C9E94_RS16710;old_locus_tag=C9E94_17105
NZ_PYJR01000112.1	Protein Homology	CDS	18937	20379	.	+	0	ID=cds-WP_000091156.1;Parent=gene-C9E94_RS16710;Dbxref=GenBank:WP_000091156.1;Name=WP_000091156.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=C9E94_RS16710;product=pyruvate kinase;protein_id=WP_000091156.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	20452	21423	.	-	.	ID=gene-C9E94_RS16715;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=C9E94_RS16715;old_locus_tag=C9E94_17110
NZ_PYJR01000112.1	Protein Homology	CDS	20452	21423	.	-	0	ID=cds-WP_000448401.1;Parent=gene-C9E94_RS16715;Dbxref=GenBank:WP_000448401.1;Name=WP_000448401.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460846.1;locus_tag=C9E94_RS16715;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_000448401.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	21540	22859	.	-	.	ID=gene-C9E94_RS16720;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=C9E94_RS16720;old_locus_tag=C9E94_17120
NZ_PYJR01000112.1	Protein Homology	CDS	21540	22859	.	-	0	ID=cds-WP_001184028.1;Parent=gene-C9E94_RS16720;Dbxref=GenBank:WP_001184028.1;Name=WP_001184028.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=C9E94_RS16720;product=murein DD-endopeptidase MepM;protein_id=WP_001184028.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	22875	23819	.	-	.	ID=gene-C9E94_RS16725;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=C9E94_RS16725;old_locus_tag=C9E94_17125
NZ_PYJR01000112.1	Protein Homology	CDS	22875	23819	.	-	0	ID=cds-WP_000939597.1;Parent=gene-C9E94_RS16725;Dbxref=GenBank:WP_000939597.1;Name=WP_000939597.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=C9E94_RS16725;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_000939597.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	23898	24653	.	+	.	ID=gene-C9E94_RS16730;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=C9E94_RS16730;old_locus_tag=C9E94_17130
NZ_PYJR01000112.1	Protein Homology	CDS	23898	24653	.	+	0	ID=cds-WP_094889161.1;Parent=gene-C9E94_RS16730;Dbxref=GenBank:WP_094889161.1;Name=WP_094889161.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=C9E94_RS16730;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_094889161.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	24650	25435	.	+	.	ID=gene-C9E94_RS16735;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=C9E94_RS16735;old_locus_tag=C9E94_17135
NZ_PYJR01000112.1	Protein Homology	CDS	24650	25435	.	+	0	ID=cds-WP_000571508.1;Parent=gene-C9E94_RS16735;Dbxref=GenBank:WP_000571508.1;Name=WP_000571508.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460850.1;locus_tag=C9E94_RS16735;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_000571508.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	25514	26524	.	-	.	ID=gene-C9E94_RS16740;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=C9E94_RS16740;old_locus_tag=C9E94_17140
NZ_PYJR01000112.1	Protein Homology	CDS	25514	26524	.	-	0	ID=cds-WP_000568508.1;Parent=gene-C9E94_RS16740;Dbxref=GenBank:WP_000568508.1;Name=WP_000568508.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460851.1;locus_tag=C9E94_RS16740;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000568508.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	26533	27144	.	-	.	ID=gene-C9E94_RS16745;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=C9E94_RS16745;old_locus_tag=C9E94_17145
NZ_PYJR01000112.1	Protein Homology	CDS	26533	27144	.	-	0	ID=cds-WP_135401140.1;Parent=gene-C9E94_RS16745;Dbxref=GenBank:WP_135401140.1;Name=WP_135401140.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=C9E94_RS16745;product=Holliday junction branch migration protein RuvA;protein_id=WP_135401140.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	27504	28196	.	-	.	ID=gene-C9E94_RS16750;Name=C9E94_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16750;old_locus_tag=C9E94_17150
NZ_PYJR01000112.1	Protein Homology	CDS	27504	28196	.	-	0	ID=cds-WP_000227320.1;Parent=gene-C9E94_RS16750;Dbxref=GenBank:WP_000227320.1;Name=WP_000227320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227317.1;locus_tag=C9E94_RS16750;product=hypothetical protein;protein_id=WP_000227320.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	28406	29005	.	+	.	ID=gene-C9E94_RS16755;Name=C9E94_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16755;old_locus_tag=C9E94_17155
NZ_PYJR01000112.1	Protein Homology	CDS	28406	29005	.	+	0	ID=cds-WP_001579444.1;Parent=gene-C9E94_RS16755;Dbxref=GenBank:WP_001579444.1;Name=WP_001579444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460854.1;locus_tag=C9E94_RS16755;product=YebB family permuted papain-like enzyme;protein_id=WP_001579444.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	29007	29528	.	-	.	ID=gene-C9E94_RS16760;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=C9E94_RS16760;old_locus_tag=C9E94_17160
NZ_PYJR01000112.1	Protein Homology	CDS	29007	29528	.	-	0	ID=cds-WP_000022509.1;Parent=gene-C9E94_RS16760;Dbxref=GenBank:WP_000022509.1;Name=WP_000022509.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=C9E94_RS16760;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_000022509.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	29565	30305	.	-	.	ID=gene-C9E94_RS16765;Name=C9E94_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16765;old_locus_tag=C9E94_17165
NZ_PYJR01000112.1	Protein Homology	CDS	29565	30305	.	-	0	ID=cds-WP_135401141.1;Parent=gene-C9E94_RS16765;Dbxref=GenBank:WP_135401141.1;Name=WP_135401141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=C9E94_RS16765;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_135401141.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	30335	30787	.	-	.	ID=gene-C9E94_RS16770;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=C9E94_RS16770;old_locus_tag=C9E94_17170
NZ_PYJR01000112.1	Protein Homology	CDS	30335	30787	.	-	0	ID=cds-WP_000653693.1;Parent=gene-C9E94_RS16770;Dbxref=GenBank:WP_000653693.1;Name=WP_000653693.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460857.1;locus_tag=C9E94_RS16770;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_000653693.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	30881	32653	.	-	.	ID=gene-C9E94_RS16775;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=C9E94_RS16775;old_locus_tag=C9E94_17175
NZ_PYJR01000112.1	Protein Homology	CDS	30881	32653	.	-	0	ID=cds-WP_001258629.1;Parent=gene-C9E94_RS16775;Dbxref=GenBank:WP_001258629.1;Name=WP_001258629.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460858.1;locus_tag=C9E94_RS16775;product=aspartate--tRNA ligase;protein_id=WP_001258629.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	32978	33544	.	+	.	ID=gene-C9E94_RS16780;Name=C9E94_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16780;old_locus_tag=C9E94_17180
NZ_PYJR01000112.1	Protein Homology	CDS	32978	33544	.	+	0	ID=cds-WP_000916144.1;Parent=gene-C9E94_RS16780;Dbxref=GenBank:WP_000916144.1;Name=WP_000916144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460859.1;locus_tag=C9E94_RS16780;product=hydrolase;protein_id=WP_000916144.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	33541	34359	.	+	.	ID=gene-C9E94_RS16785;Name=C9E94_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16785;old_locus_tag=C9E94_17185
NZ_PYJR01000112.1	Protein Homology	CDS	33541	34359	.	+	0	ID=cds-WP_135401142.1;Parent=gene-C9E94_RS16785;Dbxref=GenBank:WP_135401142.1;Name=WP_135401142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460860.1;locus_tag=C9E94_RS16785;product=DUF72 domain-containing protein;protein_id=WP_135401142.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	34412	34807	.	+	.	ID=gene-C9E94_RS16790;Name=C9E94_RS16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16790;old_locus_tag=C9E94_17190
NZ_PYJR01000112.1	Protein Homology	CDS	34412	34807	.	+	0	ID=cds-WP_000252975.1;Parent=gene-C9E94_RS16790;Dbxref=GenBank:WP_000252975.1;Name=WP_000252975.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460861.1;locus_tag=C9E94_RS16790;product=MAPEG family protein;protein_id=WP_000252975.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	34848	35591	.	+	.	ID=gene-C9E94_RS16795;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=C9E94_RS16795;old_locus_tag=C9E94_17195
NZ_PYJR01000112.1	Protein Homology	CDS	34848	35591	.	+	0	ID=cds-WP_000019612.1;Parent=gene-C9E94_RS16795;Dbxref=GenBank:WP_000019612.1;Name=WP_000019612.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460862.1;locus_tag=C9E94_RS16795;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_000019612.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	35588	36559	.	+	.	ID=gene-C9E94_RS16800;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=C9E94_RS16800;old_locus_tag=C9E94_17200
NZ_PYJR01000112.1	Protein Homology	CDS	35588	36559	.	+	0	ID=cds-WP_000569035.1;Parent=gene-C9E94_RS16800;Dbxref=GenBank:WP_000569035.1;Name=WP_000569035.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460863.1;locus_tag=C9E94_RS16800;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_000569035.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	36795	37541	.	-	.	ID=gene-C9E94_RS16805;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=C9E94_RS16805;old_locus_tag=C9E94_17210
NZ_PYJR01000112.1	Protein Homology	CDS	36795	37541	.	-	0	ID=cds-WP_001185780.1;Parent=gene-C9E94_RS16805;Dbxref=GenBank:WP_001185780.1;Name=WP_001185780.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460864.1;locus_tag=C9E94_RS16805;product=copper homeostasis protein CutC;protein_id=WP_001185780.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	37561	38130	.	-	.	ID=gene-C9E94_RS16810;Name=C9E94_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16810;old_locus_tag=C9E94_17215
NZ_PYJR01000112.1	Protein Homology	CDS	37561	38130	.	-	0	ID=cds-WP_000024794.1;Parent=gene-C9E94_RS16810;Dbxref=GenBank:WP_000024794.1;Name=WP_000024794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460865.1;locus_tag=C9E94_RS16810;product=VOC family protein;protein_id=WP_000024794.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	38367	40100	.	+	.	ID=gene-C9E94_RS16815;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=C9E94_RS16815;old_locus_tag=C9E94_17220
NZ_PYJR01000112.1	Protein Homology	CDS	38367	40100	.	+	0	ID=cds-WP_001025358.1;Parent=gene-C9E94_RS16815;Dbxref=GenBank:WP_001025358.1;Name=WP_001025358.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=C9E94_RS16815;product=arginine--tRNA ligase;protein_id=WP_001025358.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	40289	42160	.	+	.	ID=gene-C9E94_RS16820;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=C9E94_RS16820;old_locus_tag=C9E94_17225
NZ_PYJR01000112.1	Protein Homology	CDS	40289	42160	.	+	0	ID=cds-WP_000142875.1;Parent=gene-C9E94_RS16820;Dbxref=GenBank:WP_000142875.1;Name=WP_000142875.1;Ontology_term=GO:0009252,GO:0003824,GO:0008658,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=catalytic activity|0003824||IEA,penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460867.1;locus_tag=C9E94_RS16820;product=penicillin-binding protein 2;protein_id=WP_000142875.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	42214	43353	.	-	.	ID=gene-C9E94_RS16825;Name=bglB;gbkey=Gene;gene=bglB;gene_biotype=protein_coding;locus_tag=C9E94_RS16825;old_locus_tag=C9E94_17230
NZ_PYJR01000112.1	Protein Homology	CDS	42214	43353	.	-	0	ID=cds-WP_000989904.1;Parent=gene-C9E94_RS16825;Dbxref=GenBank:WP_000989904.1;Name=WP_000989904.1;Ontology_term=GO:0009313,GO:0004556;gbkey=CDS;gene=bglB;go_function=alpha-amylase activity|0004556||IEA;go_process=oligosaccharide catabolic process|0009313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=C9E94_RS16825;product=beta-galactosidase BglB;protein_id=WP_000989904.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	43590	43982	.	-	.	ID=gene-C9E94_RS16830;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=C9E94_RS16830;old_locus_tag=C9E94_17235
NZ_PYJR01000112.1	Protein Homology	CDS	43590	43982	.	-	0	ID=cds-WP_001233619.1;Parent=gene-C9E94_RS16830;Dbxref=GenBank:WP_001233619.1;Name=WP_001233619.1;Ontology_term=GO:0044781;gbkey=CDS;gene=flhE;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460869.1;locus_tag=C9E94_RS16830;product=flagellar protein FlhE;protein_id=WP_001233619.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	43982	46060	.	-	.	ID=gene-C9E94_RS16835;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=C9E94_RS16835;old_locus_tag=C9E94_17240
NZ_PYJR01000112.1	Protein Homology	CDS	43982	46060	.	-	0	ID=cds-WP_000002386.1;Parent=gene-C9E94_RS16835;Dbxref=GenBank:WP_000002386.1;Name=WP_000002386.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460870.1;locus_tag=C9E94_RS16835;product=flagellar biosynthesis protein FlhA;protein_id=WP_000002386.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	46053	47204	.	-	.	ID=gene-C9E94_RS16840;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=C9E94_RS16840;old_locus_tag=C9E94_17245
NZ_PYJR01000112.1	Protein Homology	CDS	46053	47204	.	-	0	ID=cds-WP_000797089.1;Parent=gene-C9E94_RS16840;Dbxref=GenBank:WP_000797089.1;Name=WP_000797089.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460871.1;locus_tag=C9E94_RS16840;product=flagellar biosynthesis protein FlhB;protein_id=WP_000797089.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	47398	48042	.	-	.	ID=gene-C9E94_RS16845;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=C9E94_RS16845;old_locus_tag=C9E94_17250
NZ_PYJR01000112.1	Protein Homology	CDS	47398	48042	.	-	0	ID=cds-WP_000983585.1;Parent=gene-C9E94_RS16845;Dbxref=GenBank:WP_000983585.1;Name=WP_000983585.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460872.1;locus_tag=C9E94_RS16845;product=protein phosphatase CheZ;protein_id=WP_000983585.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	48053	48442	.	-	.	ID=gene-C9E94_RS16850;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=C9E94_RS16850;old_locus_tag=C9E94_17255
NZ_PYJR01000112.1	Protein Homology	CDS	48053	48442	.	-	0	ID=cds-WP_000763861.1;Parent=gene-C9E94_RS16850;Dbxref=GenBank:WP_000763861.1;Name=WP_000763861.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=C9E94_RS16850;product=chemotaxis response regulator CheY;protein_id=WP_000763861.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	48460	49509	.	-	.	ID=gene-C9E94_RS16855;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=C9E94_RS16855;old_locus_tag=C9E94_17260
NZ_PYJR01000112.1	Protein Homology	CDS	48460	49509	.	-	0	ID=cds-WP_000036389.1;Parent=gene-C9E94_RS16855;Dbxref=GenBank:WP_000036389.1;Name=WP_000036389.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=C9E94_RS16855;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WP_000036389.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	49506	50372	.	-	.	ID=gene-C9E94_RS16860;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=C9E94_RS16860;old_locus_tag=C9E94_17265
NZ_PYJR01000112.1	Protein Homology	CDS	49506	50372	.	-	0	ID=cds-WP_000204370.1;Parent=gene-C9E94_RS16860;Dbxref=GenBank:WP_000204370.1;Name=WP_000204370.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460875.1;locus_tag=C9E94_RS16860;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_000204370.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	50533	52194	.	-	.	ID=gene-C9E94_RS16865;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=C9E94_RS16865;old_locus_tag=C9E94_17270
NZ_PYJR01000112.1	Protein Homology	CDS	50533	52194	.	-	0	ID=cds-WP_000483277.1;Parent=gene-C9E94_RS16865;Dbxref=GenBank:WP_000483277.1;Name=WP_000483277.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460876.1;locus_tag=C9E94_RS16865;product=methyl-accepting chemotaxis protein II;protein_id=WP_000483277.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	52431	52934	.	-	.	ID=gene-C9E94_RS16870;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=C9E94_RS16870;old_locus_tag=C9E94_17275
NZ_PYJR01000112.1	Protein Homology	CDS	52431	52934	.	-	0	ID=cds-WP_000147295.1;Parent=gene-C9E94_RS16870;Dbxref=GenBank:WP_000147295.1;Name=WP_000147295.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460877.1;locus_tag=C9E94_RS16870;product=chemotaxis protein CheW;protein_id=WP_000147295.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	52955	54970	.	-	.	ID=gene-C9E94_RS16875;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=C9E94_RS16875;old_locus_tag=C9E94_17280
NZ_PYJR01000112.1	Protein Homology	CDS	52955	54970	.	-	0	ID=cds-WP_000061321.1;Parent=gene-C9E94_RS16875;Dbxref=GenBank:WP_000061321.1;Name=WP_000061321.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460878.1;locus_tag=C9E94_RS16875;product=chemotaxis protein CheA;protein_id=WP_000061321.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	54975	55904	.	-	.	ID=gene-C9E94_RS16880;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=C9E94_RS16880;old_locus_tag=C9E94_17285
NZ_PYJR01000112.1	Protein Homology	CDS	54975	55904	.	-	0	ID=cds-WP_000795653.1;Parent=gene-C9E94_RS16880;Dbxref=GenBank:WP_000795653.1;Name=WP_000795653.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460879.1;locus_tag=C9E94_RS16880;product=flagellar motor protein MotB;protein_id=WP_000795653.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	55901	56788	.	-	.	ID=gene-C9E94_RS16885;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=C9E94_RS16885;old_locus_tag=C9E94_17290
NZ_PYJR01000112.1	Protein Homology	CDS	55901	56788	.	-	0	ID=cds-WP_000906312.1;Parent=gene-C9E94_RS16885;Dbxref=GenBank:WP_000906312.1;Name=WP_000906312.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460880.1;locus_tag=C9E94_RS16885;product=flagellar motor stator protein MotA;protein_id=WP_000906312.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	56913	57497	.	-	.	ID=gene-C9E94_RS16890;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=C9E94_RS16890;old_locus_tag=C9E94_17295
NZ_PYJR01000112.1	Protein Homology	CDS	56913	57497	.	-	0	ID=cds-WP_000605987.1;Parent=gene-C9E94_RS16890;Dbxref=GenBank:WP_000605987.1;Name=WP_000605987.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460881.3;locus_tag=C9E94_RS16890;product=flagellar transcriptional regulator FlhC;protein_id=WP_000605987.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	57494	57835	.	-	.	ID=gene-C9E94_RS16895;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=C9E94_RS16895;old_locus_tag=C9E94_17300
NZ_PYJR01000112.1	Protein Homology	CDS	57494	57835	.	-	0	ID=cds-WP_001518146.1;Parent=gene-C9E94_RS16895;Dbxref=GenBank:WP_001518146.1;Name=WP_001518146.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310629.2;locus_tag=C9E94_RS16895;product=flagellar transcriptional regulator FlhD;protein_id=WP_001518146.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	58518	58634	.	+	.	ID=gene-C9E94_RS16900;Name=C9E94_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16900;old_locus_tag=C9E94_17305
NZ_PYJR01000112.1	Protein Homology	CDS	58518	58634	.	+	0	ID=cds-WP_001617301.1;Parent=gene-C9E94_RS16900;Dbxref=GenBank:WP_001617301.1;Name=WP_001617301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448342.1;locus_tag=C9E94_RS16900;product=hypothetical protein;protein_id=WP_001617301.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	58631	59059	.	+	.	ID=gene-C9E94_RS16905;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=C9E94_RS16905;old_locus_tag=C9E94_17310
NZ_PYJR01000112.1	Protein Homology	CDS	58631	59059	.	+	0	ID=cds-WP_000122603.1;Parent=gene-C9E94_RS16905;Dbxref=GenBank:WP_000122603.1;Name=WP_000122603.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460884.1;locus_tag=C9E94_RS16905;product=universal stress protein UspC;protein_id=WP_000122603.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	59077	60498	.	-	.	ID=gene-C9E94_RS16910;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=C9E94_RS16910;old_locus_tag=C9E94_17315
NZ_PYJR01000112.1	Protein Homology	CDS	59077	60498	.	-	0	ID=cds-WP_000089045.1;Parent=gene-C9E94_RS16910;Dbxref=GenBank:WP_000089045.1;Name=WP_000089045.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460885.1;locus_tag=C9E94_RS16910;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_000089045.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	60473	61276	.	-	.	ID=gene-C9E94_RS16915;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=C9E94_RS16915;old_locus_tag=C9E94_17320
NZ_PYJR01000112.1	Protein Homology	CDS	60473	61276	.	-	0	ID=cds-WP_000830104.1;Parent=gene-C9E94_RS16915;Dbxref=GenBank:WP_000830104.1;Name=WP_000830104.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460886.1;locus_tag=C9E94_RS16915;product=trehalose-phosphatase;protein_id=WP_000830104.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	pseudogene	61499	61680	.	-	.	ID=gene-C9E94_RS16920;Name=araH;end_range=61680,.;gbkey=Gene;gene=araH;gene_biotype=pseudogene;locus_tag=C9E94_RS16920;old_locus_tag=C9E94_17325;partial=true;pseudo=true
NZ_PYJR01000112.1	Protein Homology	CDS	61499	61680	.	-	0	ID=cds-C9E94_RS16920;Parent=gene-C9E94_RS16920;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=61680,.;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026162.2;locus_tag=C9E94_RS16920;partial=true;product=L-arabinose ABC transporter permease AraH;pseudo=true;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	61909	62466	.	-	.	ID=gene-C9E94_RS16925;Name=C9E94_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16925;old_locus_tag=C9E94_17330
NZ_PYJR01000112.1	Protein Homology	CDS	61909	62466	.	-	0	ID=cds-WP_000754796.1;Parent=gene-C9E94_RS16925;Dbxref=GenBank:WP_000754796.1;Name=WP_000754796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460887.1;locus_tag=C9E94_RS16925;product=DJ-1/PfpI family protein;protein_id=WP_000754796.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	63017	63520	.	+	.	ID=gene-C9E94_RS16930;Name=C9E94_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16930;old_locus_tag=C9E94_17335
NZ_PYJR01000112.1	Protein Homology	CDS	63017	63520	.	+	0	ID=cds-WP_000741707.1;Parent=gene-C9E94_RS16930;Dbxref=GenBank:WP_000741707.1;Name=WP_000741707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460888.1;locus_tag=C9E94_RS16930;product=non-heme ferritin-like protein;protein_id=WP_000741707.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	63699	64337	.	-	.	ID=gene-C9E94_RS16935;Name=C9E94_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16935;old_locus_tag=C9E94_17340
NZ_PYJR01000112.1	Protein Homology	CDS	63699	64337	.	-	0	ID=cds-WP_000684804.1;Parent=gene-C9E94_RS16935;Dbxref=GenBank:WP_000684804.1;Name=WP_000684804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460889.1;locus_tag=C9E94_RS16935;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_000684804.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	64593	64928	.	+	.	ID=gene-C9E94_RS16940;Name=C9E94_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16940;old_locus_tag=C9E94_17345
NZ_PYJR01000112.1	Protein Homology	CDS	64593	64928	.	+	0	ID=cds-WP_000803229.1;Parent=gene-C9E94_RS16940;Dbxref=GenBank:WP_000803229.1;Name=WP_000803229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460890.1;locus_tag=C9E94_RS16940;product=YecR-like lipofamily protein;protein_id=WP_000803229.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	65168	65665	.	+	.	ID=gene-C9E94_RS16945;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=C9E94_RS16945;old_locus_tag=C9E94_17350
NZ_PYJR01000112.1	Protein Homology	CDS	65168	65665	.	+	0	ID=cds-WP_000920611.1;Parent=gene-C9E94_RS16945;Dbxref=GenBank:WP_000920611.1;Name=WP_000920611.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920608.1;locus_tag=C9E94_RS16945;product=non-heme ferritin;protein_id=WP_000920611.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	65711	65950	.	-	.	ID=gene-C9E94_RS16950;Name=C9E94_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16950;old_locus_tag=C9E94_17355
NZ_PYJR01000112.1	Protein Homology	CDS	65711	65950	.	-	0	ID=cds-WP_000377238.1;Parent=gene-C9E94_RS16950;Dbxref=GenBank:WP_000377238.1;Name=WP_000377238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460892.1;locus_tag=C9E94_RS16950;product=YecH family metal-binding protein;protein_id=WP_000377238.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	66177	67388	.	+	.	ID=gene-C9E94_RS16955;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=C9E94_RS16955;old_locus_tag=C9E94_17360
NZ_PYJR01000112.1	Protein Homology	CDS	66177	67388	.	+	0	ID=cds-WP_001747700.1;Parent=gene-C9E94_RS16955;Dbxref=GenBank:WP_001747700.1;Name=WP_001747700.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460893.1;locus_tag=C9E94_RS16955;product=tyrosine transporter TyrP;protein_id=WP_001747700.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	67463	68128	.	-	.	ID=gene-C9E94_RS16960;Name=C9E94_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16960;old_locus_tag=C9E94_17365
NZ_PYJR01000112.1	Protein Homology	CDS	67463	68128	.	-	0	ID=cds-WP_000781521.1;Parent=gene-C9E94_RS16960;Dbxref=GenBank:WP_000781521.1;Name=WP_000781521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460894.1;locus_tag=C9E94_RS16960;product=YecA/YgfB family protein;protein_id=WP_000781521.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	68366	68692	.	-	.	ID=gene-C9E94_RS16965;Name=C9E94_RS16965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16965;old_locus_tag=C9E94_17370
NZ_PYJR01000112.1	Protein Homology	CDS	68366	68692	.	-	0	ID=cds-WP_000240837.1;Parent=gene-C9E94_RS16965;Dbxref=GenBank:WP_000240837.1;Name=WP_000240837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460895.1;locus_tag=C9E94_RS16965;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000240837.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	68905	70344	.	-	.	ID=gene-C9E94_RS16970;Name=C9E94_RS16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16970;old_locus_tag=C9E94_17375
NZ_PYJR01000112.1	Protein Homology	CDS	68905	70344	.	-	0	ID=cds-WP_077913683.1;Parent=gene-C9E94_RS16970;Dbxref=GenBank:WP_077913683.1;Name=WP_077913683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460896.1;locus_tag=C9E94_RS16970;product=SH3 domain-containing C40 family peptidase;protein_id=WP_077913683.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	70558	70890	.	-	.	ID=gene-C9E94_RS16975;Name=C9E94_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16975;old_locus_tag=C9E94_17380
NZ_PYJR01000112.1	Protein Homology	CDS	70558	70890	.	-	0	ID=cds-WP_001556026.1;Parent=gene-C9E94_RS16975;Dbxref=GenBank:WP_001556026.1;Name=WP_001556026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460897.1;locus_tag=C9E94_RS16975;product=hypothetical protein;protein_id=WP_001556026.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	71140	71226	.	-	.	ID=gene-C9E94_RS16980;Name=C9E94_RS16980;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS16980;old_locus_tag=C9E94_17385
NZ_PYJR01000112.1	tRNAscan-SE	tRNA	71140	71226	.	-	.	ID=rna-C9E94_RS16980;Parent=gene-C9E94_RS16980;anticodon=(pos:complement(71190..71192));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS16980;product=tRNA-Leu
NZ_PYJR01000112.1	tRNAscan-SE	exon	71140	71226	.	-	.	ID=exon-C9E94_RS16980-1;Parent=rna-C9E94_RS16980;anticodon=(pos:complement(71190..71192));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS16980;product=tRNA-Leu
NZ_PYJR01000112.1	RefSeq	gene	71238	71311	.	-	.	ID=gene-C9E94_RS16985;Name=C9E94_RS16985;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS16985;old_locus_tag=C9E94_17390
NZ_PYJR01000112.1	tRNAscan-SE	tRNA	71238	71311	.	-	.	ID=rna-C9E94_RS16985;Parent=gene-C9E94_RS16985;anticodon=(pos:complement(71277..71279));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS16985;product=tRNA-Cys
NZ_PYJR01000112.1	tRNAscan-SE	exon	71238	71311	.	-	.	ID=exon-C9E94_RS16985-1;Parent=rna-C9E94_RS16985;anticodon=(pos:complement(71277..71279));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS16985;product=tRNA-Cys
NZ_PYJR01000112.1	RefSeq	gene	71364	71439	.	-	.	ID=gene-C9E94_RS16990;Name=C9E94_RS16990;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS16990;old_locus_tag=C9E94_17395
NZ_PYJR01000112.1	tRNAscan-SE	tRNA	71364	71439	.	-	.	ID=rna-C9E94_RS16990;Parent=gene-C9E94_RS16990;anticodon=(pos:complement(71404..71406));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS16990;product=tRNA-Gly
NZ_PYJR01000112.1	tRNAscan-SE	exon	71364	71439	.	-	.	ID=exon-C9E94_RS16990-1;Parent=rna-C9E94_RS16990;anticodon=(pos:complement(71404..71406));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS16990;product=tRNA-Gly
NZ_PYJR01000112.1	RefSeq	gene	71591	72139	.	-	.	ID=gene-C9E94_RS16995;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=C9E94_RS16995;old_locus_tag=C9E94_17400
NZ_PYJR01000112.1	Protein Homology	CDS	71591	72139	.	-	0	ID=cds-WP_001160194.1;Parent=gene-C9E94_RS16995;Dbxref=GenBank:WP_001160194.1;Name=WP_001160194.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460898.1;locus_tag=C9E94_RS16995;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_001160194.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	72196	74028	.	-	.	ID=gene-C9E94_RS17000;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=C9E94_RS17000;old_locus_tag=C9E94_17405
NZ_PYJR01000112.1	Protein Homology	CDS	72196	74028	.	-	0	ID=cds-WP_001289464.1;Parent=gene-C9E94_RS17000;Dbxref=GenBank:WP_001289464.1;Name=WP_001289464.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460899.1;locus_tag=C9E94_RS17000;product=excinuclease ABC subunit UvrC;protein_id=WP_001289464.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	74025	74681	.	-	.	ID=gene-C9E94_RS17005;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=C9E94_RS17005;old_locus_tag=C9E94_17410
NZ_PYJR01000112.1	Protein Homology	CDS	74025	74681	.	-	0	ID=cds-WP_000611323.1;Parent=gene-C9E94_RS17005;Dbxref=GenBank:WP_000611323.1;Name=WP_000611323.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460900.1;locus_tag=C9E94_RS17005;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_000611323.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	74993	75148	.	+	.	ID=gene-C9E94_RS17010;Name=C9E94_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17010;old_locus_tag=C9E94_17415
NZ_PYJR01000112.1	Protein Homology	CDS	74993	75148	.	+	0	ID=cds-WP_000546188.1;Parent=gene-C9E94_RS17010;Dbxref=GenBank:WP_000546188.1;Name=WP_000546188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448360.1;locus_tag=C9E94_RS17010;product=hypothetical protein;protein_id=WP_000546188.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	75145	75369	.	+	.	ID=gene-C9E94_RS17015;Name=C9E94_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17015;old_locus_tag=C9E94_17420
NZ_PYJR01000112.1	Protein Homology	CDS	75145	75369	.	+	0	ID=cds-WP_000106483.1;Parent=gene-C9E94_RS17015;Dbxref=GenBank:WP_000106483.1;Name=WP_000106483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460902.1;locus_tag=C9E94_RS17015;product=DUF2594 family protein;protein_id=WP_000106483.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	75436	76158	.	-	.	ID=gene-C9E94_RS17020;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=C9E94_RS17020;old_locus_tag=C9E94_17425
NZ_PYJR01000112.1	Protein Homology	CDS	75436	76158	.	-	0	ID=cds-WP_001157169.1;Parent=gene-C9E94_RS17020;Dbxref=GenBank:WP_001157169.1;Name=WP_001157169.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460903.1;locus_tag=C9E94_RS17020;product=transcriptional regulator SdiA;protein_id=WP_001157169.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	76390	77142	.	-	.	ID=gene-C9E94_RS17025;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=C9E94_RS17025;old_locus_tag=C9E94_17430
NZ_PYJR01000112.1	Protein Homology	CDS	76390	77142	.	-	0	ID=cds-WP_001273033.1;Parent=gene-C9E94_RS17025;Dbxref=GenBank:WP_001273033.1;Name=WP_001273033.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460904.1;locus_tag=C9E94_RS17025;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=WP_001273033.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	77139	77807	.	-	.	ID=gene-C9E94_RS17030;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=C9E94_RS17030;old_locus_tag=C9E94_17435
NZ_PYJR01000112.1	Protein Homology	CDS	77139	77807	.	-	0	ID=cds-WP_001158238.1;Parent=gene-C9E94_RS17030;Dbxref=GenBank:WP_001158238.1;Name=WP_001158238.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460905.1;locus_tag=C9E94_RS17030;product=cystine ABC transporter permease;protein_id=WP_001158238.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	77828	78814	.	-	.	ID=gene-C9E94_RS17035;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=C9E94_RS17035;old_locus_tag=C9E94_17440
NZ_PYJR01000112.1	Protein Homology	CDS	77828	78814	.	-	0	ID=cds-WP_001128188.1;Parent=gene-C9E94_RS17035;Dbxref=GenBank:WP_001128188.1;Name=WP_001128188.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460906.1;locus_tag=C9E94_RS17035;product=D-cysteine desulfhydrase;protein_id=WP_001128188.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	78968	79768	.	-	.	ID=gene-C9E94_RS17040;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=C9E94_RS17040;old_locus_tag=C9E94_17445
NZ_PYJR01000112.1	Protein Homology	CDS	78968	79768	.	-	0	ID=cds-WP_023993337.1;Parent=gene-C9E94_RS17040;Dbxref=GenBank:WP_023993337.1;Name=WP_023993337.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460907.1;locus_tag=C9E94_RS17040;product=cystine ABC transporter substrate-binding protein;protein_id=WP_023993337.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	79915	80466	.	-	.	ID=gene-C9E94_RS17045;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=C9E94_RS17045;old_locus_tag=C9E94_17450
NZ_PYJR01000112.1	Protein Homology	CDS	79915	80466	.	-	0	ID=cds-WP_000218080.1;Parent=gene-C9E94_RS17045;Dbxref=GenBank:WP_000218080.1;Name=WP_000218080.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460908.1;locus_tag=C9E94_RS17045;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_000218080.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	80525	81244	.	-	.	ID=gene-C9E94_RS17050;Name=C9E94_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17050;old_locus_tag=C9E94_17455
NZ_PYJR01000112.1	Protein Homology	CDS	80525	81244	.	-	0	ID=cds-WP_001087453.1;Parent=gene-C9E94_RS17050;Dbxref=GenBank:WP_001087453.1;Name=WP_001087453.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460909.1;locus_tag=C9E94_RS17050;product=RNA polymerase sigma factor FliA;protein_id=WP_001087453.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	81441	82646	.	-	.	ID=gene-C9E94_RS17055;Name=fliB;gbkey=Gene;gene=fliB;gene_biotype=protein_coding;locus_tag=C9E94_RS17055;old_locus_tag=C9E94_17460
NZ_PYJR01000112.1	Protein Homology	CDS	81441	82646	.	-	0	ID=cds-WP_000659233.1;Parent=gene-C9E94_RS17055;Dbxref=GenBank:WP_000659233.1;Name=WP_000659233.1;gbkey=CDS;gene=fliB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460911.1;locus_tag=C9E94_RS17055;product=flagellin lysine-N-methylase;protein_id=WP_000659233.1;transl_table=11
NZ_PYJR01000112.1	RefSeq	gene	82725	83832	.	-	.	ID=gene-C9E94_RS17060;Name=C9E94_RS17060;end_range=83832,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17060;old_locus_tag=C9E94_17465;partial=true
NZ_PYJR01000112.1	Protein Homology	CDS	82725	83832	.	-	1	ID=cds-WP_079816878.1;Parent=gene-C9E94_RS17060;Dbxref=GenBank:WP_079816878.1;Name=WP_079816878.1;Ontology_term=GO:0071973,GO:0005198;end_range=83832,.;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460912.1;locus_tag=C9E94_RS17060;partial=true;product=flagellin;protein_id=WP_079816878.1;transl_table=11
##sequence-region NZ_PYJR01000021.1 1 83121
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000021.1	RefSeq	region	1	83121	.	+	.	ID=NZ_PYJR01000021.1:1..83121;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000021.1	RefSeq	pseudogene	1	1435	.	-	.	ID=gene-C9E94_RS01670;Name=C9E94_RS01670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS01670;old_locus_tag=C9E94_01705;partial=true;pseudo=true;start_range=.,1
NZ_PYJR01000021.1	Protein Homology	CDS	1	1435	.	-	0	ID=cds-C9E94_RS01670;Parent=gene-C9E94_RS01670;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017472.6;locus_tag=C9E94_RS01670;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	1725	2933	.	-	.	ID=gene-C9E94_RS01675;Name=C9E94_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01675;old_locus_tag=C9E94_01715
NZ_PYJR01000021.1	Protein Homology	CDS	1725	2933	.	-	0	ID=cds-WP_135400757.1;Parent=gene-C9E94_RS01675;Dbxref=GenBank:WP_135400757.1;Name=WP_135400757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301887.1;locus_tag=C9E94_RS01675;product=STY4528 family pathogenicity island replication protein;protein_id=WP_135400757.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	2933	3457	.	-	.	ID=gene-C9E94_RS01680;Name=C9E94_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01680;old_locus_tag=C9E94_01720
NZ_PYJR01000021.1	Protein Homology	CDS	2933	3457	.	-	0	ID=cds-WP_000992996.1;Parent=gene-C9E94_RS01680;Dbxref=GenBank:WP_000992996.1;Name=WP_000992996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001013785.1;locus_tag=C9E94_RS01680;product=DUF2857 domain-containing protein;protein_id=WP_000992996.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	3539	3781	.	-	.	ID=gene-C9E94_RS01685;Name=C9E94_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01685;old_locus_tag=C9E94_01725
NZ_PYJR01000021.1	Protein Homology	CDS	3539	3781	.	-	0	ID=cds-WP_000642590.1;Parent=gene-C9E94_RS01685;Dbxref=GenBank:WP_000642590.1;Name=WP_000642590.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642589.1;locus_tag=C9E94_RS01685;product=TraR/DksA C4-type zinc finger protein;protein_id=WP_000642590.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	3778	5391	.	-	.	ID=gene-C9E94_RS01690;Name=C9E94_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01690;old_locus_tag=C9E94_01730
NZ_PYJR01000021.1	Protein Homology	CDS	3778	5391	.	-	0	ID=cds-WP_135400758.1;Parent=gene-C9E94_RS01690;Dbxref=GenBank:WP_135400758.1;Name=WP_135400758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000202097.1;locus_tag=C9E94_RS01690;product=ParB family protein;protein_id=WP_135400758.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	5381	6733	.	-	.	ID=gene-C9E94_RS01695;Name=dnaB-PI;gbkey=Gene;gene=dnaB-PI;gene_biotype=protein_coding;locus_tag=C9E94_RS01695;old_locus_tag=C9E94_01735
NZ_PYJR01000021.1	Protein Homology	CDS	5381	6733	.	-	0	ID=cds-WP_135400759.1;Parent=gene-C9E94_RS01695;Dbxref=GenBank:WP_135400759.1;Name=WP_135400759.1;gbkey=CDS;gene=dnaB-PI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001059486.1;locus_tag=C9E94_RS01695;product=SPI-7-type island replicative DNA helicase;protein_id=WP_135400759.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	6726	7115	.	-	.	ID=gene-C9E94_RS01700;Name=C9E94_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01700;old_locus_tag=C9E94_01740
NZ_PYJR01000021.1	Protein Homology	CDS	6726	7115	.	-	0	ID=cds-WP_135400760.1;Parent=gene-C9E94_RS01700;Dbxref=GenBank:WP_135400760.1;Name=WP_135400760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000177554.1;locus_tag=C9E94_RS01700;product=hypothetical protein;protein_id=WP_135400760.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	7112	7990	.	-	.	ID=gene-C9E94_RS01705;Name=C9E94_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01705;old_locus_tag=C9E94_01745
NZ_PYJR01000021.1	Protein Homology	CDS	7112	7990	.	-	0	ID=cds-WP_058331671.1;Parent=gene-C9E94_RS01705;Dbxref=GenBank:WP_058331671.1;Name=WP_058331671.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228831.1;locus_tag=C9E94_RS01705;product=ParA family protein;protein_id=WP_058331671.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	8258	9520	.	+	.	ID=gene-C9E94_RS01710;Name=C9E94_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01710;old_locus_tag=C9E94_01750
NZ_PYJR01000021.1	Protein Homology	CDS	8258	9520	.	+	0	ID=cds-WP_135400761.1;Parent=gene-C9E94_RS01710;Dbxref=GenBank:WP_135400761.1;Name=WP_135400761.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001219011.1;locus_tag=C9E94_RS01710;product=tyrosine-type recombinase/integrase;protein_id=WP_135400761.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	10138	11022	.	-	.	ID=gene-C9E94_RS01715;Name=C9E94_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01715;old_locus_tag=C9E94_01755
NZ_PYJR01000021.1	Protein Homology	CDS	10138	11022	.	-	0	ID=cds-WP_135400762.1;Parent=gene-C9E94_RS01715;Dbxref=GenBank:WP_135400762.1;Name=WP_135400762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000511771.1;locus_tag=C9E94_RS01715;product=integrase domain-containing protein;protein_id=WP_135400762.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	11765	11986	.	-	.	ID=gene-C9E94_RS01725;Name=C9E94_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01725;old_locus_tag=C9E94_01765
NZ_PYJR01000021.1	Protein Homology	CDS	11765	11986	.	-	0	ID=cds-WP_135400763.1;Parent=gene-C9E94_RS01725;Dbxref=GenBank:WP_135400763.1;Name=WP_135400763.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193311.1;locus_tag=C9E94_RS01725;product=helix-turn-helix domain-containing protein;protein_id=WP_135400763.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	11983	12444	.	-	.	ID=gene-C9E94_RS01730;Name=C9E94_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01730;old_locus_tag=C9E94_01770
NZ_PYJR01000021.1	Protein Homology	CDS	11983	12444	.	-	0	ID=cds-WP_135400783.1;Parent=gene-C9E94_RS01730;Dbxref=GenBank:WP_135400783.1;Name=WP_135400783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012822469.1;locus_tag=C9E94_RS01730;product=hypothetical protein;protein_id=WP_135400783.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	12961	14874	.	+	.	ID=gene-C9E94_RS01735;Name=C9E94_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01735;old_locus_tag=C9E94_01775
NZ_PYJR01000021.1	Protein Homology	CDS	12961	14874	.	+	0	ID=cds-WP_135400764.1;Parent=gene-C9E94_RS01735;Dbxref=GenBank:WP_135400764.1;Name=WP_135400764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999377.1;locus_tag=C9E94_RS01735;product=hypothetical protein;protein_id=WP_135400764.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	14871	16571	.	+	.	ID=gene-C9E94_RS01740;Name=C9E94_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01740;old_locus_tag=C9E94_01780
NZ_PYJR01000021.1	GeneMarkS-2+	CDS	14871	16571	.	+	0	ID=cds-WP_135400765.1;Parent=gene-C9E94_RS01740;Dbxref=GenBank:WP_135400765.1;Name=WP_135400765.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS01740;product=hypothetical protein;protein_id=WP_135400765.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	16714	17412	.	-	.	ID=gene-C9E94_RS01745;Name=C9E94_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01745;old_locus_tag=C9E94_01785
NZ_PYJR01000021.1	Protein Homology	CDS	16714	17412	.	-	0	ID=cds-WP_135400766.1;Parent=gene-C9E94_RS01745;Dbxref=GenBank:WP_135400766.1;Name=WP_135400766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000966916.1;locus_tag=C9E94_RS01745;product=hypothetical protein;protein_id=WP_135400766.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	17499	17987	.	-	.	ID=gene-C9E94_RS01750;Name=C9E94_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01750;old_locus_tag=C9E94_01790
NZ_PYJR01000021.1	Protein Homology	CDS	17499	17987	.	-	0	ID=cds-WP_135400767.1;Parent=gene-C9E94_RS01750;Dbxref=GenBank:WP_135400767.1;Name=WP_135400767.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463183.1;locus_tag=C9E94_RS01750;product=GNAT family N-acetyltransferase;protein_id=WP_135400767.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	17984	18277	.	-	.	ID=gene-C9E94_RS01755;Name=C9E94_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01755;old_locus_tag=C9E94_01795
NZ_PYJR01000021.1	Protein Homology	CDS	17984	18277	.	-	0	ID=cds-WP_135400768.1;Parent=gene-C9E94_RS01755;Dbxref=GenBank:WP_135400768.1;Name=WP_135400768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463182.1;locus_tag=C9E94_RS01755;product=type II toxin-antitoxin system TacA family antitoxin;protein_id=WP_135400768.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	18605	18664	.	-	.	ID=gene-C9E94_RS23770;Name=C9E94_RS23770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23770;old_locus_tag=C9E94_01800
NZ_PYJR01000021.1	Protein Homology	CDS	18605	18664	.	-	0	ID=cds-WP_135400784.1;Parent=gene-C9E94_RS23770;Dbxref=GenBank:WP_135400784.1;Name=WP_135400784.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025073.6;locus_tag=C9E94_RS23770;product=hypothetical protein;protein_id=WP_135400784.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	19236	19988	.	+	.	ID=gene-C9E94_RS01765;Name=C9E94_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01765;old_locus_tag=C9E94_01805
NZ_PYJR01000021.1	Protein Homology	CDS	19236	19988	.	+	0	ID=cds-WP_135400769.1;Parent=gene-C9E94_RS01765;Dbxref=GenBank:WP_135400769.1;Name=WP_135400769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463184.1;locus_tag=C9E94_RS01765;product=non-specific acid phosphatase;protein_id=WP_135400769.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	pseudogene	20131	21176	.	+	.	ID=gene-C9E94_RS01770;Name=C9E94_RS01770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS01770;old_locus_tag=C9E94_01810;pseudo=true
NZ_PYJR01000021.1	Protein Homology	CDS	20131	21176	.	+	0	ID=cds-C9E94_RS01770;Parent=gene-C9E94_RS01770;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=C9E94_RS01770;product=IS256 family transposase;pseudo=true;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	21265	22266	.	-	.	ID=gene-C9E94_RS01775;Name=C9E94_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01775;old_locus_tag=C9E94_01815
NZ_PYJR01000021.1	Protein Homology	CDS	21265	22266	.	-	0	ID=cds-WP_135400770.1;Parent=gene-C9E94_RS01775;Dbxref=GenBank:WP_135400770.1;Name=WP_135400770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000676522.1;locus_tag=C9E94_RS01775;product=DUF1202 family protein;protein_id=WP_135400770.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	pseudogene	22604	23486	.	-	.	ID=gene-C9E94_RS01785;Name=C9E94_RS01785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS01785;old_locus_tag=C9E94_01825;pseudo=true
NZ_PYJR01000021.1	Protein Homology	CDS	22604	23486	.	-	0	ID=cds-C9E94_RS01785;Parent=gene-C9E94_RS01785;Note=frameshifted%3B internal stop;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612101.1;locus_tag=C9E94_RS01785;product=IS3 family transposase;pseudo=true;transl_table=11
NZ_PYJR01000021.1	RefSeq	pseudogene	23603	23825	.	+	.	ID=gene-C9E94_RS23555;Name=C9E94_RS23555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23555;old_locus_tag=C9E94_01830;pseudo=true
NZ_PYJR01000021.1	Protein Homology	CDS	23603	23825	.	+	0	ID=cds-C9E94_RS23555;Parent=gene-C9E94_RS23555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463181.1;locus_tag=C9E94_RS23555;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	24090	24965	.	+	.	ID=gene-C9E94_RS01795;Name=C9E94_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01795;old_locus_tag=C9E94_01835
NZ_PYJR01000021.1	Protein Homology	CDS	24090	24965	.	+	0	ID=cds-WP_135400772.1;Parent=gene-C9E94_RS01795;Dbxref=GenBank:WP_135400772.1;Name=WP_135400772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463180.1;locus_tag=C9E94_RS01795;product=AraC family transcriptional regulator;protein_id=WP_135400772.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	24962	25249	.	+	.	ID=gene-C9E94_RS01800;Name=rtsB;gbkey=Gene;gene=rtsB;gene_biotype=protein_coding;locus_tag=C9E94_RS01800;old_locus_tag=C9E94_01840
NZ_PYJR01000021.1	Protein Homology	CDS	24962	25249	.	+	0	ID=cds-WP_001269916.1;Parent=gene-C9E94_RS01800;Dbxref=GenBank:WP_001269916.1;Name=WP_001269916.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rtsB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463179.3;locus_tag=C9E94_RS01800;product=transcriptional regulator RtsB;protein_id=WP_001269916.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	25272	25487	.	+	.	ID=gene-C9E94_RS01805;Name=C9E94_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01805;old_locus_tag=C9E94_01845
NZ_PYJR01000021.1	Protein Homology	CDS	25272	25487	.	+	0	ID=cds-WP_001595136.1;Parent=gene-C9E94_RS01805;Dbxref=GenBank:WP_001595136.1;Name=WP_001595136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463178.1;locus_tag=C9E94_RS01805;product=hypothetical protein;protein_id=WP_001595136.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	pseudogene	25495	25632	.	+	.	ID=gene-C9E94_RS23560;Name=C9E94_RS23560;end_range=25632,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23560;partial=true;pseudo=true
NZ_PYJR01000021.1	Protein Homology	CDS	25495	25632	.	+	0	ID=cds-C9E94_RS23560;Parent=gene-C9E94_RS23560;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=25632,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=C9E94_RS23560;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYJR01000021.1	RefSeq	pseudogene	25750	25881	.	+	.	ID=gene-C9E94_RS23565;Name=C9E94_RS23565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23565;partial=true;pseudo=true;start_range=.,25750
NZ_PYJR01000021.1	Protein Homology	CDS	25750	25881	.	+	0	ID=cds-C9E94_RS23565;Parent=gene-C9E94_RS23565;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=C9E94_RS23565;partial=true;product=hypothetical protein;pseudo=true;start_range=.,25750;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	26176	27081	.	-	.	ID=gene-C9E94_RS01815;Name=C9E94_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01815;old_locus_tag=C9E94_01855
NZ_PYJR01000021.1	Protein Homology	CDS	26176	27081	.	-	0	ID=cds-WP_135400773.1;Parent=gene-C9E94_RS01815;Dbxref=GenBank:WP_135400773.1;Name=WP_135400773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463175.1;locus_tag=C9E94_RS01815;product=SdiA-regulated domain-containing protein;protein_id=WP_135400773.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	27385	28785	.	+	.	ID=gene-C9E94_RS01820;Name=C9E94_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01820;old_locus_tag=C9E94_01860
NZ_PYJR01000021.1	Protein Homology	CDS	27385	28785	.	+	0	ID=cds-WP_135400774.1;Parent=gene-C9E94_RS01820;Dbxref=GenBank:WP_135400774.1;Name=WP_135400774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463174.1;locus_tag=C9E94_RS01820;product=CBM96 family carbohydrate-binding protein;protein_id=WP_135400774.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	28869	29462	.	-	.	ID=gene-C9E94_RS01825;Name=C9E94_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01825;old_locus_tag=C9E94_01865
NZ_PYJR01000021.1	Protein Homology	CDS	28869	29462	.	-	0	ID=cds-WP_369598036.1;Parent=gene-C9E94_RS01825;Dbxref=GenBank:WP_369598036.1;Name=WP_369598036.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001139857.1;locus_tag=C9E94_RS01825;product=TorD/DmsD family molecular chaperone;protein_id=WP_369598036.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	29539	30312	.	-	.	ID=gene-C9E94_RS01830;Name=C9E94_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01830;old_locus_tag=C9E94_01870
NZ_PYJR01000021.1	Protein Homology	CDS	29539	30312	.	-	0	ID=cds-WP_020839691.1;Parent=gene-C9E94_RS01830;Dbxref=GenBank:WP_020839691.1;Name=WP_020839691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463172.1;locus_tag=C9E94_RS01830;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_020839691.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	30305	30931	.	-	.	ID=gene-C9E94_RS01835;Name=C9E94_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01835;old_locus_tag=C9E94_01875
NZ_PYJR01000021.1	Protein Homology	CDS	30305	30931	.	-	0	ID=cds-WP_000816143.1;Parent=gene-C9E94_RS01835;Dbxref=GenBank:WP_000816143.1;Name=WP_000816143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463171.1;locus_tag=C9E94_RS01835;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_000816143.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	30945	33374	.	-	.	ID=gene-C9E94_RS01840;Name=C9E94_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01840;old_locus_tag=C9E94_01880
NZ_PYJR01000021.1	Protein Homology	CDS	30945	33374	.	-	0	ID=cds-WP_167853636.1;Parent=gene-C9E94_RS01840;Dbxref=GenBank:WP_167853636.1;Name=WP_167853636.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403483.1;locus_tag=C9E94_RS01840;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_167853636.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	33730	35361	.	+	.	ID=gene-C9E94_RS01845;Name=C9E94_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01845;old_locus_tag=C9E94_01885
NZ_PYJR01000021.1	Protein Homology	CDS	33730	35361	.	+	0	ID=cds-WP_023137205.1;Parent=gene-C9E94_RS01845;Dbxref=GenBank:WP_023137205.1;Name=WP_023137205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463169.1;locus_tag=C9E94_RS01845;product=sensor histidine kinase;protein_id=WP_023137205.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	35358	36077	.	+	.	ID=gene-C9E94_RS01850;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=C9E94_RS01850;old_locus_tag=C9E94_01890
NZ_PYJR01000021.1	Protein Homology	CDS	35358	36077	.	+	0	ID=cds-WP_000611307.1;Parent=gene-C9E94_RS01850;Dbxref=GenBank:WP_000611307.1;Name=WP_000611307.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463168.1;locus_tag=C9E94_RS01850;product=two-component system response regulator DcuR;protein_id=WP_000611307.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	36394	36660	.	+	.	ID=gene-C9E94_RS01855;Name=C9E94_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01855;old_locus_tag=C9E94_01895
NZ_PYJR01000021.1	Protein Homology	CDS	36394	36660	.	+	0	ID=cds-WP_024156601.1;Parent=gene-C9E94_RS01855;Dbxref=GenBank:WP_024156601.1;Name=WP_024156601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463167.1;locus_tag=C9E94_RS01855;product=hypothetical protein;protein_id=WP_024156601.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	36807	38147	.	+	.	ID=gene-C9E94_RS01860;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=C9E94_RS01860;old_locus_tag=C9E94_01900
NZ_PYJR01000021.1	Protein Homology	CDS	36807	38147	.	+	0	ID=cds-WP_000899149.1;Parent=gene-C9E94_RS01860;Dbxref=GenBank:WP_000899149.1;Name=WP_000899149.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463166.1;locus_tag=C9E94_RS01860;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_000899149.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	38243	39889	.	+	.	ID=gene-C9E94_RS01865;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=C9E94_RS01865;old_locus_tag=C9E94_01905
NZ_PYJR01000021.1	Protein Homology	CDS	38243	39889	.	+	0	ID=cds-WP_000037202.1;Parent=gene-C9E94_RS01865;Dbxref=GenBank:WP_000037202.1;Name=WP_000037202.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463165.1;locus_tag=C9E94_RS01865;product=class I fumarate hydratase FumA;protein_id=WP_000037202.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	39987	41417	.	-	.	ID=gene-C9E94_RS01870;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=C9E94_RS01870;old_locus_tag=C9E94_01910
NZ_PYJR01000021.1	Protein Homology	CDS	39987	41417	.	-	0	ID=cds-WP_021001040.1;Parent=gene-C9E94_RS01870;Dbxref=GenBank:WP_021001040.1;Name=WP_021001040.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463164.1;locus_tag=C9E94_RS01870;product=melibiose:sodium transporter MelB;protein_id=WP_021001040.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	41501	42856	.	-	.	ID=gene-C9E94_RS01875;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=C9E94_RS01875;old_locus_tag=C9E94_01915
NZ_PYJR01000021.1	Protein Homology	CDS	41501	42856	.	-	0	ID=cds-WP_001728428.1;Parent=gene-C9E94_RS01875;Dbxref=GenBank:WP_001728428.1;Name=WP_001728428.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463163.1;locus_tag=C9E94_RS01875;product=alpha-galactosidase;protein_id=WP_001728428.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	43125	44057	.	+	.	ID=gene-C9E94_RS01880;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=C9E94_RS01880;old_locus_tag=C9E94_01920
NZ_PYJR01000021.1	Protein Homology	CDS	43125	44057	.	+	0	ID=cds-WP_000106992.1;Parent=gene-C9E94_RS01880;Dbxref=GenBank:WP_000106992.1;Name=WP_000106992.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463162.1;locus_tag=C9E94_RS01880;product=transcriptional regulator MelR;protein_id=WP_000106992.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	44290	46557	.	+	.	ID=gene-C9E94_RS01885;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=C9E94_RS01885;old_locus_tag=C9E94_01925
NZ_PYJR01000021.1	Protein Homology	CDS	44290	46557	.	+	0	ID=cds-WP_088884185.1;Parent=gene-C9E94_RS01885;Dbxref=GenBank:WP_088884185.1;Name=WP_088884185.1;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709824.2;locus_tag=C9E94_RS01885;product=arginine decarboxylase;protein_id=WP_088884185.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	46855	47616	.	+	.	ID=gene-C9E94_RS01890;Name=C9E94_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01890;old_locus_tag=C9E94_01930
NZ_PYJR01000021.1	Protein Homology	CDS	46855	47616	.	+	0	ID=cds-WP_001217075.1;Parent=gene-C9E94_RS01890;Dbxref=GenBank:WP_001217075.1;Name=WP_001217075.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463160.1;locus_tag=C9E94_RS01890;product=AraC family transcriptional regulator;protein_id=WP_001217075.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	47756	49093	.	+	.	ID=gene-C9E94_RS01895;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=C9E94_RS01895;old_locus_tag=C9E94_01935
NZ_PYJR01000021.1	Protein Homology	CDS	47756	49093	.	+	0	ID=cds-WP_000093130.1;Parent=gene-C9E94_RS01895;Dbxref=GenBank:WP_000093130.1;Name=WP_000093130.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463159.1;locus_tag=C9E94_RS01895;product=arginine/agmatine antiporter;protein_id=WP_000093130.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	49227	50870	.	+	.	ID=gene-C9E94_RS01900;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=C9E94_RS01900;old_locus_tag=C9E94_01940
NZ_PYJR01000021.1	Protein Homology	CDS	49227	50870	.	+	0	ID=cds-WP_000919290.1;Parent=gene-C9E94_RS01900;Dbxref=GenBank:WP_000919290.1;Name=WP_000919290.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463158.1;locus_tag=C9E94_RS01900;product=phosphoethanolamine transferase EptA;protein_id=WP_000919290.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	50867	51535	.	+	.	ID=gene-C9E94_RS01905;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=C9E94_RS01905;old_locus_tag=C9E94_01945
NZ_PYJR01000021.1	Protein Homology	CDS	50867	51535	.	+	0	ID=cds-WP_000697899.1;Parent=gene-C9E94_RS01905;Dbxref=GenBank:WP_000697899.1;Name=WP_000697899.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463157.1;locus_tag=C9E94_RS01905;product=two-component system response regulator PmrA;protein_id=WP_000697899.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	51545	52615	.	+	.	ID=gene-C9E94_RS01910;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=C9E94_RS01910;old_locus_tag=C9E94_01950
NZ_PYJR01000021.1	Protein Homology	CDS	51545	52615	.	+	0	ID=cds-WP_001212189.1;Parent=gene-C9E94_RS01910;Dbxref=GenBank:WP_001212189.1;Name=WP_001212189.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463156.1;locus_tag=C9E94_RS01910;product=two-component system sensor histidine kinase PmrB;protein_id=WP_001212189.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	52623	52712	.	-	.	ID=gene-C9E94_RS01915;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=C9E94_RS01915;old_locus_tag=C9E94_01955
NZ_PYJR01000021.1	Protein Homology	CDS	52623	52712	.	-	0	ID=cds-WP_000844399.1;Parent=gene-C9E94_RS01915;Dbxref=GenBank:WP_000844399.1;Name=WP_000844399.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844399.1;locus_tag=C9E94_RS01915;product=LpxT activity modulator PmrR;protein_id=WP_000844399.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	52782	54284	.	-	.	ID=gene-C9E94_RS01920;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=C9E94_RS01920;old_locus_tag=C9E94_01960
NZ_PYJR01000021.1	Protein Homology	CDS	52782	54284	.	-	0	ID=cds-WP_000919711.1;Parent=gene-C9E94_RS01920;Dbxref=GenBank:WP_000919711.1;Name=WP_000919711.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463155.1;locus_tag=C9E94_RS01920;product=glycine betaine/L-proline transporter ProP;protein_id=WP_000919711.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	54752	55087	.	+	.	ID=gene-C9E94_RS01925;Name=C9E94_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01925;old_locus_tag=C9E94_01965
NZ_PYJR01000021.1	Protein Homology	CDS	54752	55087	.	+	0	ID=cds-WP_000056482.1;Parent=gene-C9E94_RS01925;Dbxref=GenBank:WP_000056482.1;Name=WP_000056482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463154.1;locus_tag=C9E94_RS01925;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_000056482.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	55207	55650	.	+	.	ID=gene-C9E94_RS01930;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=C9E94_RS01930;old_locus_tag=C9E94_01970
NZ_PYJR01000021.1	Protein Homology	CDS	55207	55650	.	+	0	ID=cds-WP_001131301.1;Parent=gene-C9E94_RS01930;Dbxref=GenBank:WP_001131301.1;Name=WP_001131301.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463153.1;locus_tag=C9E94_RS01930;product=VOC family metalloprotein YjdN;protein_id=WP_001131301.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	55802	56236	.	+	.	ID=gene-C9E94_RS01935;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=C9E94_RS01935;old_locus_tag=C9E94_01975
NZ_PYJR01000021.1	Protein Homology	CDS	55802	56236	.	+	0	ID=cds-WP_001673662.1;Parent=gene-C9E94_RS01935;Dbxref=GenBank:WP_001673662.1;Name=WP_001673662.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=C9E94_RS01935;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WP_001673662.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	56494	57402	.	+	.	ID=gene-C9E94_RS01940;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=C9E94_RS01940;old_locus_tag=C9E94_01980
NZ_PYJR01000021.1	Protein Homology	CDS	56494	57402	.	+	0	ID=cds-WP_000457022.1;Parent=gene-C9E94_RS01940;Dbxref=GenBank:WP_000457022.1;Name=WP_000457022.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463151.1;locus_tag=C9E94_RS01940;product=lipid A hydroxylase LpxO;protein_id=WP_000457022.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	57757	59904	.	+	.	ID=gene-C9E94_RS01945;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=C9E94_RS01945;old_locus_tag=C9E94_01985
NZ_PYJR01000021.1	Protein Homology	CDS	57757	59904	.	+	0	ID=cds-WP_135400776.1;Parent=gene-C9E94_RS01945;Dbxref=GenBank:WP_135400776.1;Name=WP_135400776.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=C9E94_RS01945;product=formate dehydrogenase subunit alpha;protein_id=WP_135400776.1;transl_except=(pos:58174..58176%2Caa:Sec);transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	60081	60770	.	+	.	ID=gene-C9E94_RS01950;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=C9E94_RS01950;old_locus_tag=C9E94_01990
NZ_PYJR01000021.1	Protein Homology	CDS	60081	60770	.	+	0	ID=cds-WP_000771453.1;Parent=gene-C9E94_RS01950;Dbxref=GenBank:WP_000771453.1;Name=WP_000771453.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463149.1;locus_tag=C9E94_RS01950;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WP_000771453.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	60928	62238	.	-	.	ID=gene-C9E94_RS01955;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=C9E94_RS01955;old_locus_tag=C9E94_01995
NZ_PYJR01000021.1	Protein Homology	CDS	60928	62238	.	-	0	ID=cds-WP_000793278.1;Parent=gene-C9E94_RS01955;Dbxref=GenBank:WP_000793278.1;Name=WP_000793278.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463148.1;locus_tag=C9E94_RS01955;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_000793278.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	62583	63203	.	-	.	ID=gene-C9E94_RS01960;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=C9E94_RS01960;old_locus_tag=C9E94_02000
NZ_PYJR01000021.1	Protein Homology	CDS	62583	63203	.	-	0	ID=cds-WP_135400777.1;Parent=gene-C9E94_RS01960;Dbxref=GenBank:WP_135400777.1;Name=WP_135400777.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463147.1;locus_tag=C9E94_RS01960;product=heme lyase NrfEFG subunit NrfG;protein_id=WP_135400777.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	pseudogene	63200	65438	.	-	.	ID=gene-C9E94_RS01970;Name=nrfF;gbkey=Gene;gene=nrfF;gene_biotype=pseudogene;locus_tag=C9E94_RS01970;old_locus_tag=C9E94_02010;pseudo=true
NZ_PYJR01000021.1	Protein Homology	CDS	63200	65438	.	-	0	ID=cds-C9E94_RS01970;Parent=gene-C9E94_RS01970;Note=frameshifted%3B internal stop;gbkey=CDS;gene=nrfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=C9E94_RS01970;product=heme lyase NrfEFG subunit NrfF;pseudo=true;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	65431	66387	.	-	.	ID=gene-C9E94_RS01975;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=C9E94_RS01975;old_locus_tag=C9E94_02015
NZ_PYJR01000021.1	Protein Homology	CDS	65431	66387	.	-	0	ID=cds-WP_135400779.1;Parent=gene-C9E94_RS01975;Dbxref=GenBank:WP_135400779.1;Name=WP_135400779.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463145.1;locus_tag=C9E94_RS01975;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_135400779.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	66384	67055	.	-	.	ID=gene-C9E94_RS01980;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=C9E94_RS01980;old_locus_tag=C9E94_02020
NZ_PYJR01000021.1	Protein Homology	CDS	66384	67055	.	-	0	ID=cds-WP_135400780.1;Parent=gene-C9E94_RS01980;Dbxref=GenBank:WP_135400780.1;Name=WP_135400780.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463144.1;locus_tag=C9E94_RS01980;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_135400780.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	67052	67618	.	-	.	ID=gene-C9E94_RS01985;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=C9E94_RS01985;old_locus_tag=C9E94_02025
NZ_PYJR01000021.1	Protein Homology	CDS	67052	67618	.	-	0	ID=cds-WP_000115065.1;Parent=gene-C9E94_RS01985;Dbxref=GenBank:WP_000115065.1;Name=WP_000115065.1;Ontology_term=GO:0008152,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=C9E94_RS01985;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_000115065.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	67730	69166	.	-	.	ID=gene-C9E94_RS01990;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=C9E94_RS01990;old_locus_tag=C9E94_02030
NZ_PYJR01000021.1	Protein Homology	CDS	67730	69166	.	-	0	ID=cds-WP_000101771.1;Parent=gene-C9E94_RS01990;Dbxref=GenBank:WP_000101771.1;Name=WP_000101771.1;Ontology_term=GO:0008152,GO:0005509,GO:0020037,GO:0042279,GO:0042597;gbkey=CDS;gene=nrfA;go_component=periplasmic space|0042597||IEA;go_function=calcium ion binding|0005509||IEA,heme binding|0020037||IEA,nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463142.1;locus_tag=C9E94_RS01990;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_000101771.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	69598	71556	.	+	.	ID=gene-C9E94_RS01995;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=C9E94_RS01995;old_locus_tag=C9E94_02040
NZ_PYJR01000021.1	Protein Homology	CDS	69598	71556	.	+	0	ID=cds-WP_135400781.1;Parent=gene-C9E94_RS01995;Dbxref=GenBank:WP_135400781.1;Name=WP_135400781.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463140.1;locus_tag=C9E94_RS01995;product=acetate--CoA ligase;protein_id=WP_135400781.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	71802	72116	.	+	.	ID=gene-C9E94_RS02000;Name=C9E94_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02000;old_locus_tag=C9E94_02050
NZ_PYJR01000021.1	Protein Homology	CDS	71802	72116	.	+	0	ID=cds-WP_000999620.1;Parent=gene-C9E94_RS02000;Dbxref=GenBank:WP_000999620.1;Name=WP_000999620.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463139.1;locus_tag=C9E94_RS02000;product=DUF485 domain-containing protein;protein_id=WP_000999620.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	72113	73762	.	+	.	ID=gene-C9E94_RS02005;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=C9E94_RS02005;old_locus_tag=C9E94_02055
NZ_PYJR01000021.1	Protein Homology	CDS	72113	73762	.	+	0	ID=cds-WP_000832536.1;Parent=gene-C9E94_RS02005;Dbxref=GenBank:WP_000832536.1;Name=WP_000832536.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463138.1;locus_tag=C9E94_RS02005;product=cation/acetate symporter ActP;protein_id=WP_000832536.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	73801	74490	.	-	.	ID=gene-C9E94_RS02010;Name=C9E94_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02010;old_locus_tag=C9E94_02060
NZ_PYJR01000021.1	Protein Homology	CDS	73801	74490	.	-	0	ID=cds-WP_001067096.1;Parent=gene-C9E94_RS02010;Dbxref=GenBank:WP_001067096.1;Name=WP_001067096.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463137.1;locus_tag=C9E94_RS02010;product=LrgB family protein;protein_id=WP_001067096.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	74483	74893	.	-	.	ID=gene-C9E94_RS02015;Name=C9E94_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02015;old_locus_tag=C9E94_02065
NZ_PYJR01000021.1	Protein Homology	CDS	74483	74893	.	-	0	ID=cds-WP_000257347.1;Parent=gene-C9E94_RS02015;Dbxref=GenBank:WP_000257347.1;Name=WP_000257347.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463136.1;locus_tag=C9E94_RS02015;product=CidA/LrgA family protein;protein_id=WP_000257347.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	74997	75884	.	+	.	ID=gene-C9E94_RS02020;Name=C9E94_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02020;old_locus_tag=C9E94_02070
NZ_PYJR01000021.1	Protein Homology	CDS	74997	75884	.	+	0	ID=cds-WP_000354962.1;Parent=gene-C9E94_RS02020;Dbxref=GenBank:WP_000354962.1;Name=WP_000354962.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463135.1;locus_tag=C9E94_RS02020;product=LysR family transcriptional regulator;protein_id=WP_000354962.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	75979	77625	.	-	.	ID=gene-C9E94_RS02025;Name=C9E94_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02025;old_locus_tag=C9E94_02075
NZ_PYJR01000021.1	Protein Homology	CDS	75979	77625	.	-	0	ID=cds-WP_000402189.1;Parent=gene-C9E94_RS02025;Dbxref=GenBank:WP_000402189.1;Name=WP_000402189.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463134.1;locus_tag=C9E94_RS02025;product=Na+/H+ antiporter;protein_id=WP_000402189.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	77775	79124	.	-	.	ID=gene-C9E94_RS02035;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=C9E94_RS02035;old_locus_tag=C9E94_02085
NZ_PYJR01000021.1	Protein Homology	CDS	77775	79124	.	-	0	ID=cds-WP_000106901.1;Parent=gene-C9E94_RS02035;Dbxref=GenBank:WP_000106901.1;Name=WP_000106901.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=C9E94_RS02035;product=guanine/hypoxanthine transporter GhxP;protein_id=WP_000106901.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	79471	80139	.	-	.	ID=gene-C9E94_RS02040;Name=C9E94_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02040;old_locus_tag=C9E94_02095
NZ_PYJR01000021.1	Protein Homology	CDS	79471	80139	.	-	0	ID=cds-WP_076937641.1;Parent=gene-C9E94_RS02040;Dbxref=GenBank:WP_076937641.1;Name=WP_076937641.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463132.1;locus_tag=C9E94_RS02040;product=glutathione S-transferase family protein;protein_id=WP_076937641.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	80432	80890	.	-	.	ID=gene-C9E94_RS02045;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=C9E94_RS02045;old_locus_tag=C9E94_02100
NZ_PYJR01000021.1	Protein Homology	CDS	80432	80890	.	-	0	ID=cds-WP_000412686.1;Parent=gene-C9E94_RS02045;Dbxref=GenBank:WP_000412686.1;Name=WP_000412686.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463131.1;locus_tag=C9E94_RS02045;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412686.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	80977	81300	.	+	.	ID=gene-C9E94_RS02050;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=C9E94_RS02050;old_locus_tag=C9E94_02105
NZ_PYJR01000021.1	Protein Homology	CDS	80977	81300	.	+	0	ID=cds-WP_000019483.1;Parent=gene-C9E94_RS02050;Dbxref=GenBank:WP_000019483.1;Name=WP_000019483.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463130.1;locus_tag=C9E94_RS02050;product=superoxide response transcriptional regulator SoxS;protein_id=WP_000019483.1;transl_table=11
NZ_PYJR01000021.1	RefSeq	gene	81288	82889	.	-	.	ID=gene-C9E94_RS02055;Name=C9E94_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02055;old_locus_tag=C9E94_02110
NZ_PYJR01000021.1	Protein Homology	CDS	81288	82889	.	-	0	ID=cds-WP_135400782.1;Parent=gene-C9E94_RS02055;Dbxref=GenBank:WP_135400782.1;Name=WP_135400782.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463129.1;locus_tag=C9E94_RS02055;product=EAL domain-containing protein;protein_id=WP_135400782.1;transl_table=11
##sequence-region NZ_PYJR01000101.1 1 76920
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000101.1	RefSeq	region	1	76920	.	+	.	ID=NZ_PYJR01000101.1:1..76920;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000101.1	RefSeq	gene	1	1147	.	-	.	ID=gene-C9E94_RS14820;Name=C9E94_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14820;old_locus_tag=C9E94_15165;partial=true;start_range=.,1
NZ_PYJR01000101.1	Protein Homology	CDS	1	1147	.	-	0	ID=cds-WP_047657322.1;Parent=gene-C9E94_RS14820;Dbxref=GenBank:WP_047657322.1;Name=WP_047657322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460102.1;locus_tag=C9E94_RS14820;partial=true;product=N-acetylneuraminate epimerase;protein_id=WP_047657322.1;start_range=.,1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	1653	2333	.	+	.	ID=gene-C9E94_RS14825;Name=C9E94_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14825;old_locus_tag=C9E94_15170
NZ_PYJR01000101.1	Protein Homology	CDS	1653	2333	.	+	0	ID=cds-WP_135401110.1;Parent=gene-C9E94_RS14825;Dbxref=GenBank:WP_135401110.1;Name=WP_135401110.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460101.1;locus_tag=C9E94_RS14825;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_135401110.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	2662	4158	.	+	.	ID=gene-C9E94_RS14830;Name=C9E94_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14830;old_locus_tag=C9E94_15180
NZ_PYJR01000101.1	Protein Homology	CDS	2662	4158	.	+	0	ID=cds-WP_000628085.1;Parent=gene-C9E94_RS14830;Dbxref=GenBank:WP_000628085.1;Name=WP_000628085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460100.1;locus_tag=C9E94_RS14830;product=sodium:solute symporter;protein_id=WP_000628085.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	4444	5325	.	+	.	ID=gene-C9E94_RS14835;Name=C9E94_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14835;old_locus_tag=C9E94_15185
NZ_PYJR01000101.1	Protein Homology	CDS	4444	5325	.	+	0	ID=cds-WP_000433673.1;Parent=gene-C9E94_RS14835;Dbxref=GenBank:WP_000433673.1;Name=WP_000433673.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460099.1;locus_tag=C9E94_RS14835;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000433673.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	5431	6219	.	-	.	ID=gene-C9E94_RS14840;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=C9E94_RS14840;old_locus_tag=C9E94_15190
NZ_PYJR01000101.1	Protein Homology	CDS	5431	6219	.	-	0	ID=cds-WP_000533527.1;Parent=gene-C9E94_RS14840;Dbxref=GenBank:WP_000533527.1;Name=WP_000533527.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=C9E94_RS14840;product=phosphate starvation-inducible protein PhoH;protein_id=WP_000533527.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	7113	8621	.	-	.	ID=gene-C9E94_RS14845;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=C9E94_RS14845;old_locus_tag=C9E94_15200
NZ_PYJR01000101.1	Protein Homology	CDS	7113	8621	.	-	0	ID=cds-WP_001018463.1;Parent=gene-C9E94_RS14845;Dbxref=GenBank:WP_001018463.1;Name=WP_001018463.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460097.1;locus_tag=C9E94_RS14845;product=sodium/proline symporter PutP;protein_id=WP_001018463.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	9043	13005	.	+	.	ID=gene-C9E94_RS14850;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=C9E94_RS14850;old_locus_tag=C9E94_15210
NZ_PYJR01000101.1	Protein Homology	CDS	9043	13005	.	+	0	ID=cds-WP_135401111.1;Parent=gene-C9E94_RS14850;Dbxref=GenBank:WP_135401111.1;Name=WP_135401111.1;Ontology_term=GO:0006355,GO:0055129,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,L-glutamate gamma-semialdehyde dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447555.1;locus_tag=C9E94_RS14850;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_135401111.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	13064	13459	.	+	.	ID=gene-C9E94_RS14855;Name=C9E94_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14855;old_locus_tag=C9E94_15215
NZ_PYJR01000101.1	Protein Homology	CDS	13064	13459	.	+	0	ID=cds-WP_000821059.1;Parent=gene-C9E94_RS14855;Dbxref=GenBank:WP_000821059.1;Name=WP_000821059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460095.1;locus_tag=C9E94_RS14855;product=lysozyme inhibitor LprI family protein;protein_id=WP_000821059.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	13456	14094	.	-	.	ID=gene-C9E94_RS14860;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=C9E94_RS14860;old_locus_tag=C9E94_15220
NZ_PYJR01000101.1	Protein Homology	CDS	13456	14094	.	-	0	ID=cds-WP_000083126.1;Parent=gene-C9E94_RS14860;Dbxref=GenBank:WP_000083126.1;Name=WP_000083126.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460094.1;locus_tag=C9E94_RS14860;product=HTH-type transcriptional regulator RutR;protein_id=WP_000083126.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	14231	14398	.	-	.	ID=gene-C9E94_RS14865;Name=C9E94_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14865;old_locus_tag=C9E94_15225
NZ_PYJR01000101.1	Protein Homology	CDS	14231	14398	.	-	0	ID=cds-WP_001273663.1;Parent=gene-C9E94_RS14865;Dbxref=GenBank:WP_001273663.1;Name=WP_001273663.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460093.1;locus_tag=C9E94_RS14865;product=general stress protein;protein_id=WP_001273663.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	14783	15379	.	+	.	ID=gene-C9E94_RS14870;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=C9E94_RS14870;old_locus_tag=C9E94_15230
NZ_PYJR01000101.1	Protein Homology	CDS	14783	15379	.	+	0	ID=cds-WP_001062898.1;Parent=gene-C9E94_RS14870;Dbxref=GenBank:WP_001062898.1;Name=WP_001062898.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460092.1;locus_tag=C9E94_RS14870;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_001062898.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	15400	15627	.	+	.	ID=gene-C9E94_RS14875;Name=C9E94_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14875;old_locus_tag=C9E94_15235
NZ_PYJR01000101.1	Protein Homology	CDS	15400	15627	.	+	0	ID=cds-WP_001143125.1;Parent=gene-C9E94_RS14875;Dbxref=GenBank:WP_001143125.1;Name=WP_001143125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=C9E94_RS14875;product=YccJ family protein;protein_id=WP_001143125.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	15661	16902	.	-	.	ID=gene-C9E94_RS14880;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=C9E94_RS14880;old_locus_tag=C9E94_15240
NZ_PYJR01000101.1	Protein Homology	CDS	15661	16902	.	-	0	ID=cds-WP_000749194.1;Parent=gene-C9E94_RS14880;Dbxref=GenBank:WP_000749194.1;Name=WP_000749194.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460090.1;locus_tag=C9E94_RS14880;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_000749194.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	17035	17541	.	-	.	ID=gene-C9E94_RS14885;Name=C9E94_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14885;old_locus_tag=C9E94_15245
NZ_PYJR01000101.1	Protein Homology	CDS	17035	17541	.	-	0	ID=cds-WP_000907530.1;Parent=gene-C9E94_RS14885;Dbxref=GenBank:WP_000907530.1;Name=WP_000907530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460089.1;locus_tag=C9E94_RS14885;product=protein disulfide oxidoreductase;protein_id=WP_000907530.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	17531	18154	.	-	.	ID=gene-C9E94_RS14890;Name=C9E94_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14890;old_locus_tag=C9E94_15250
NZ_PYJR01000101.1	Protein Homology	CDS	17531	18154	.	-	0	ID=cds-WP_000876690.1;Parent=gene-C9E94_RS14890;Dbxref=GenBank:WP_000876690.1;Name=WP_000876690.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460088.1;locus_tag=C9E94_RS14890;product=DsbA family protein;protein_id=WP_000876690.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	18151	20037	.	-	.	ID=gene-C9E94_RS14895;Name=C9E94_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14895;old_locus_tag=C9E94_15255
NZ_PYJR01000101.1	Protein Homology	CDS	18151	20037	.	-	0	ID=cds-WP_000972961.1;Parent=gene-C9E94_RS14895;Dbxref=GenBank:WP_000972961.1;Name=WP_000972961.1;Ontology_term=GO:0009055,GO:0015036;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460087.1;locus_tag=C9E94_RS14895;product=protein-disulfide reductase DsbD family protein;protein_id=WP_000972961.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	20086	20448	.	-	.	ID=gene-C9E94_RS14900;Name=C9E94_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14900;old_locus_tag=C9E94_15260
NZ_PYJR01000101.1	Protein Homology	CDS	20086	20448	.	-	0	ID=cds-WP_135401112.1;Parent=gene-C9E94_RS14900;Dbxref=GenBank:WP_135401112.1;Name=WP_135401112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460086.1;locus_tag=C9E94_RS14900;product=copper resistance protein;protein_id=WP_135401112.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	20683	21603	.	+	.	ID=gene-C9E94_RS14905;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=C9E94_RS14905;old_locus_tag=C9E94_15270
NZ_PYJR01000101.1	Protein Homology	CDS	20683	21603	.	+	0	ID=cds-WP_000420603.1;Parent=gene-C9E94_RS14905;Dbxref=GenBank:WP_000420603.1;Name=WP_000420603.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460085.1;locus_tag=C9E94_RS14905;product=curved DNA-binding protein;protein_id=WP_000420603.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	21603	21908	.	+	.	ID=gene-C9E94_RS14910;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=C9E94_RS14910;old_locus_tag=C9E94_15275
NZ_PYJR01000101.1	Protein Homology	CDS	21603	21908	.	+	0	ID=cds-WP_001284251.1;Parent=gene-C9E94_RS14910;Dbxref=GenBank:WP_001284251.1;Name=WP_001284251.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460084.1;locus_tag=C9E94_RS14910;product=chaperone modulator CbpM;protein_id=WP_001284251.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	22562	22924	.	+	.	ID=gene-C9E94_RS14920;Name=C9E94_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14920;old_locus_tag=C9E94_15285
NZ_PYJR01000101.1	Protein Homology	CDS	22562	22924	.	+	0	ID=cds-WP_001537781.1;Parent=gene-C9E94_RS14920;Dbxref=GenBank:WP_001537781.1;Name=WP_001537781.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460083.1;locus_tag=C9E94_RS14920;product=anti-adapter protein IraM;protein_id=WP_001537781.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	23332	24270	.	-	.	ID=gene-C9E94_RS14925;Name=C9E94_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14925;old_locus_tag=C9E94_15290
NZ_PYJR01000101.1	Protein Homology	CDS	23332	24270	.	-	0	ID=cds-WP_000976562.1;Parent=gene-C9E94_RS14925;Dbxref=GenBank:WP_000976562.1;Name=WP_000976562.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460082.1;locus_tag=C9E94_RS14925;product=MBL fold metallo-hydrolase;protein_id=WP_000976562.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	24284	25180	.	-	.	ID=gene-C9E94_RS14930;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=C9E94_RS14930;old_locus_tag=C9E94_15295
NZ_PYJR01000101.1	Protein Homology	CDS	24284	25180	.	-	0	ID=cds-WP_000336602.1;Parent=gene-C9E94_RS14930;Dbxref=GenBank:WP_000336602.1;Name=WP_000336602.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460081.1;locus_tag=C9E94_RS14930;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WP_000336602.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	25190	26566	.	-	.	ID=gene-C9E94_RS14935;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=C9E94_RS14935;old_locus_tag=C9E94_15300
NZ_PYJR01000101.1	Protein Homology	CDS	25190	26566	.	-	0	ID=cds-WP_001285803.1;Parent=gene-C9E94_RS14935;Dbxref=GenBank:WP_001285803.1;Name=WP_001285803.1;Ontology_term=GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=C9E94_RS14935;product=4-hydroxyphenylacetate permease;protein_id=WP_001285803.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	26639	27430	.	-	.	ID=gene-C9E94_RS14940;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=C9E94_RS14940;old_locus_tag=C9E94_15305
NZ_PYJR01000101.1	Protein Homology	CDS	26639	27430	.	-	0	ID=cds-WP_000785061.1;Parent=gene-C9E94_RS14940;Dbxref=GenBank:WP_000785061.1;Name=WP_000785061.1;Ontology_term=GO:0010124;gbkey=CDS;gene=hpaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460079.1;locus_tag=C9E94_RS14940;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_000785061.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	27441	28244	.	-	.	ID=gene-C9E94_RS14945;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=C9E94_RS14945;old_locus_tag=C9E94_15310
NZ_PYJR01000101.1	Protein Homology	CDS	27441	28244	.	-	0	ID=cds-WP_000884795.1;Parent=gene-C9E94_RS14945;Dbxref=GenBank:WP_000884795.1;Name=WP_000884795.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460078.1;locus_tag=C9E94_RS14945;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=WP_000884795.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	28388	28768	.	-	.	ID=gene-C9E94_RS14955;Name=C9E94_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14955;old_locus_tag=C9E94_15320
NZ_PYJR01000101.1	Protein Homology	CDS	28388	28768	.	-	0	ID=cds-WP_001119849.1;Parent=gene-C9E94_RS14955;Dbxref=GenBank:WP_001119849.1;Name=WP_001119849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460077.1;locus_tag=C9E94_RS14955;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_001119849.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	28778	29629	.	-	.	ID=gene-C9E94_RS14960;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=C9E94_RS14960;old_locus_tag=C9E94_15325
NZ_PYJR01000101.1	Protein Homology	CDS	28778	29629	.	-	0	ID=cds-WP_000516978.1;Parent=gene-C9E94_RS14960;Dbxref=GenBank:WP_000516978.1;Name=WP_000516978.1;Ontology_term=GO:0008152,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460076.1;locus_tag=C9E94_RS14960;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_000516978.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	29631	31097	.	-	.	ID=gene-C9E94_RS14965;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=C9E94_RS14965;old_locus_tag=C9E94_15330
NZ_PYJR01000101.1	Protein Homology	CDS	29631	31097	.	-	0	ID=cds-WP_000723524.1;Parent=gene-C9E94_RS14965;Dbxref=GenBank:WP_000723524.1;Name=WP_000723524.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=C9E94_RS14965;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_000723524.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	31094	32383	.	-	.	ID=gene-C9E94_RS14970;Name=hpaG;gbkey=Gene;gene=hpaG;gene_biotype=protein_coding;locus_tag=C9E94_RS14970;old_locus_tag=C9E94_15335
NZ_PYJR01000101.1	Protein Homology	CDS	31094	32383	.	-	0	ID=cds-WP_000679210.1;Parent=gene-C9E94_RS14970;Dbxref=GenBank:WP_000679210.1;Name=WP_000679210.1;Ontology_term=GO:1901023,GO:0008704,GO:0018800;gbkey=CDS;gene=hpaG;go_function=5-carboxymethyl-2-hydroxymuconate delta-isomerase activity|0008704||IEA,5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase activity|0018800||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460074.1;locus_tag=C9E94_RS14970;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=WP_000679210.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	32659	33099	.	+	.	ID=gene-C9E94_RS14975;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=C9E94_RS14975;old_locus_tag=C9E94_15340
NZ_PYJR01000101.1	Protein Homology	CDS	32659	33099	.	+	0	ID=cds-WP_000543922.1;Parent=gene-C9E94_RS14975;Dbxref=GenBank:WP_000543922.1;Name=WP_000543922.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460073.1;locus_tag=C9E94_RS14975;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_000543922.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	33317	34879	.	+	.	ID=gene-C9E94_RS14980;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=C9E94_RS14980;old_locus_tag=C9E94_15345
NZ_PYJR01000101.1	Protein Homology	CDS	33317	34879	.	+	0	ID=cds-WP_000801496.1;Parent=gene-C9E94_RS14980;Dbxref=GenBank:WP_000801496.1;Name=WP_000801496.1;Ontology_term=GO:0010124,GO:0016712,GO:0050660;gbkey=CDS;gene=hpaB;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C reduced flavin or flavoprotein as one donor%2C and incorporation of one atom of oxygen|0016712||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=C9E94_RS14980;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_000801496.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	34897	35409	.	+	.	ID=gene-C9E94_RS14985;Name=C9E94_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14985;old_locus_tag=C9E94_15350
NZ_PYJR01000101.1	Protein Homology	CDS	34897	35409	.	+	0	ID=cds-WP_001195556.1;Parent=gene-C9E94_RS14985;Dbxref=GenBank:WP_001195556.1;Name=WP_001195556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460071.1;locus_tag=C9E94_RS14985;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WP_001195556.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	35742	36152	.	-	.	ID=gene-C9E94_RS14990;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=C9E94_RS14990;old_locus_tag=C9E94_15365
NZ_PYJR01000101.1	Protein Homology	CDS	35742	36152	.	-	0	ID=cds-WP_000833182.1;Parent=gene-C9E94_RS14990;Dbxref=GenBank:WP_000833182.1;Name=WP_000833182.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460070.1;locus_tag=C9E94_RS14990;product=hydroxyisourate hydrolase;protein_id=WP_000833182.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	36288	36968	.	+	.	ID=gene-C9E94_RS14995;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=C9E94_RS14995;old_locus_tag=C9E94_15370
NZ_PYJR01000101.1	Protein Homology	CDS	36288	36968	.	+	0	ID=cds-WP_000698207.1;Parent=gene-C9E94_RS14995;Dbxref=GenBank:WP_000698207.1;Name=WP_000698207.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698203.1;locus_tag=C9E94_RS14995;product=response regulator transcription factor HprR;protein_id=WP_000698207.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	36961	38325	.	+	.	ID=gene-C9E94_RS15000;Name=C9E94_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15000;old_locus_tag=C9E94_15375
NZ_PYJR01000101.1	Protein Homology	CDS	36961	38325	.	+	0	ID=cds-WP_135401113.1;Parent=gene-C9E94_RS15000;Dbxref=GenBank:WP_135401113.1;Name=WP_135401113.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447527.1;locus_tag=C9E94_RS15000;product=heavy metal sensor histidine kinase;protein_id=WP_135401113.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	38498	39967	.	+	.	ID=gene-C9E94_RS15005;Name=C9E94_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15005;old_locus_tag=C9E94_15380
NZ_PYJR01000101.1	Protein Homology	CDS	38498	39967	.	+	0	ID=cds-WP_000760235.1;Parent=gene-C9E94_RS15005;Dbxref=GenBank:WP_000760235.1;Name=WP_000760235.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460067.1;locus_tag=C9E94_RS15005;product=C69 family dipeptidase;protein_id=WP_000760235.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	40076	40186	.	+	.	ID=gene-C9E94_RS15010;Name=C9E94_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15010;old_locus_tag=C9E94_15385
NZ_PYJR01000101.1	Protein Homology	CDS	40076	40186	.	+	0	ID=cds-WP_000174813.1;Parent=gene-C9E94_RS15010;Dbxref=GenBank:WP_000174813.1;Name=WP_000174813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447525.1;locus_tag=C9E94_RS15010;product=hypothetical protein;protein_id=WP_000174813.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	40187	40357	.	-	.	ID=gene-C9E94_RS15015;Name=C9E94_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15015;old_locus_tag=C9E94_15390
NZ_PYJR01000101.1	Protein Homology	CDS	40187	40357	.	-	0	ID=cds-WP_001111006.1;Parent=gene-C9E94_RS15015;Dbxref=GenBank:WP_001111006.1;Name=WP_001111006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460065.1;locus_tag=C9E94_RS15015;product=YlcI/YnfO family protein;protein_id=WP_001111006.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	40689	42374	.	+	.	ID=gene-C9E94_RS15020;Name=sopB;gbkey=Gene;gene=sopB;gene_biotype=protein_coding;locus_tag=C9E94_RS15020;old_locus_tag=C9E94_15395
NZ_PYJR01000101.1	Protein Homology	CDS	40689	42374	.	+	0	ID=cds-WP_135401114.1;Parent=gene-C9E94_RS15020;Dbxref=GenBank:WP_135401114.1;Name=WP_135401114.1;gbkey=CDS;gene=sopB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460064.1;locus_tag=C9E94_RS15020;product=SPI-1 type III secretion system effector inositol phosphate phosphatase SopB;protein_id=WP_135401114.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	42391	42732	.	+	.	ID=gene-C9E94_RS15025;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=C9E94_RS15025;old_locus_tag=C9E94_15400
NZ_PYJR01000101.1	Protein Homology	CDS	42391	42732	.	+	0	ID=cds-WP_023237065.1;Parent=gene-C9E94_RS15025;Dbxref=GenBank:WP_023237065.1;Name=WP_023237065.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460063.1;locus_tag=C9E94_RS15025;product=type III secretion system chaperone SigE;protein_id=WP_023237065.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	42742	43062	.	-	.	ID=gene-C9E94_RS15030;Name=C9E94_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15030;old_locus_tag=C9E94_15405
NZ_PYJR01000101.1	Protein Homology	CDS	42742	43062	.	-	0	ID=cds-WP_135401117.1;Parent=gene-C9E94_RS15030;Dbxref=GenBank:WP_135401117.1;Name=WP_135401117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=C9E94_RS15030;product=hypothetical protein;protein_id=WP_135401117.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	43280	44155	.	+	.	ID=gene-C9E94_RS15035;Name=pipB;gbkey=Gene;gene=pipB;gene_biotype=protein_coding;locus_tag=C9E94_RS15035;old_locus_tag=C9E94_15410
NZ_PYJR01000101.1	Protein Homology	CDS	43280	44155	.	+	0	ID=cds-WP_135401115.1;Parent=gene-C9E94_RS15035;Dbxref=GenBank:WP_135401115.1;Name=WP_135401115.1;gbkey=CDS;gene=pipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460061.1;locus_tag=C9E94_RS15035;product=SPI-2 type III secretion system effector PipB;protein_id=WP_135401115.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	44377	45057	.	+	.	ID=gene-C9E94_RS15040;Name=pipA;gbkey=Gene;gene=pipA;gene_biotype=protein_coding;locus_tag=C9E94_RS15040;old_locus_tag=C9E94_15415
NZ_PYJR01000101.1	Protein Homology	CDS	44377	45057	.	+	0	ID=cds-WP_000938191.1;Parent=gene-C9E94_RS15040;Dbxref=GenBank:WP_000938191.1;Name=WP_000938191.1;gbkey=CDS;gene=pipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460060.1;locus_tag=C9E94_RS15040;product=type III secretion system effector protease PipA;protein_id=WP_000938191.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	45196	45283	.	-	.	ID=gene-C9E94_RS15045;Name=C9E94_RS15045;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS15045;old_locus_tag=C9E94_15420
NZ_PYJR01000101.1	tRNAscan-SE	tRNA	45196	45283	.	-	.	ID=rna-C9E94_RS15045;Parent=gene-C9E94_RS15045;anticodon=(pos:complement(45247..45249));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS15045;product=tRNA-Ser
NZ_PYJR01000101.1	tRNAscan-SE	exon	45196	45283	.	-	.	ID=exon-C9E94_RS15045-1;Parent=rna-C9E94_RS15045;anticodon=(pos:complement(45247..45249));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS15045;product=tRNA-Ser
NZ_PYJR01000101.1	RefSeq	gene	45678	46337	.	+	.	ID=gene-C9E94_RS15050;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=C9E94_RS15050;old_locus_tag=C9E94_15430
NZ_PYJR01000101.1	Protein Homology	CDS	45678	46337	.	+	0	ID=cds-WP_000374046.1;Parent=gene-C9E94_RS15050;Dbxref=GenBank:WP_000374046.1;Name=WP_000374046.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=C9E94_RS15050;product=FtsH protease modulator YccA;protein_id=WP_000374046.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	46424	46753	.	+	.	ID=gene-C9E94_RS15055;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=C9E94_RS15055;old_locus_tag=C9E94_15435
NZ_PYJR01000101.1	Protein Homology	CDS	46424	46753	.	+	0	ID=cds-WP_000904446.1;Parent=gene-C9E94_RS15055;Dbxref=GenBank:WP_000904446.1;Name=WP_000904446.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460058.1;locus_tag=C9E94_RS15055;product=sulfurtransferase TusE;protein_id=WP_000904446.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	46750	47031	.	-	.	ID=gene-C9E94_RS15060;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=C9E94_RS15060;old_locus_tag=C9E94_15440
NZ_PYJR01000101.1	Protein Homology	CDS	46750	47031	.	-	0	ID=cds-WP_000072884.1;Parent=gene-C9E94_RS15060;Dbxref=GenBank:WP_000072884.1;Name=WP_000072884.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460057.1;locus_tag=C9E94_RS15060;product=acylphosphatase;protein_id=WP_000072884.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	47080	47859	.	-	.	ID=gene-C9E94_RS15065;Name=C9E94_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15065;old_locus_tag=C9E94_15445
NZ_PYJR01000101.1	Protein Homology	CDS	47080	47859	.	-	0	ID=cds-WP_000548082.1;Parent=gene-C9E94_RS15065;Dbxref=GenBank:WP_000548082.1;Name=WP_000548082.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=C9E94_RS15065;product=helix-turn-helix transcriptional regulator;protein_id=WP_000548082.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	47885	48433	.	-	.	ID=gene-C9E94_RS15070;Name=C9E94_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15070;old_locus_tag=C9E94_15450
NZ_PYJR01000101.1	Protein Homology	CDS	47885	48433	.	-	0	ID=cds-WP_000859416.1;Parent=gene-C9E94_RS15070;Dbxref=GenBank:WP_000859416.1;Name=WP_000859416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460055.1;locus_tag=C9E94_RS15070;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_000859416.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	48648	49859	.	+	.	ID=gene-C9E94_RS15075;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=C9E94_RS15075;old_locus_tag=C9E94_15455
NZ_PYJR01000101.1	Protein Homology	CDS	48648	49859	.	+	0	ID=cds-WP_000140480.1;Parent=gene-C9E94_RS15075;Dbxref=GenBank:WP_000140480.1;Name=WP_000140480.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=C9E94_RS15075;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_000140480.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	49917	50234	.	+	.	ID=gene-C9E94_RS15080;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=C9E94_RS15080;old_locus_tag=C9E94_15460
NZ_PYJR01000101.1	Protein Homology	CDS	49917	50234	.	+	0	ID=cds-WP_000561983.1;Parent=gene-C9E94_RS15080;Dbxref=GenBank:WP_000561983.1;Name=WP_000561983.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=C9E94_RS15080;product=heat shock protein HspQ;protein_id=WP_000561983.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	50279	50692	.	-	.	ID=gene-C9E94_RS15085;Name=C9E94_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15085;old_locus_tag=C9E94_15465
NZ_PYJR01000101.1	Protein Homology	CDS	50279	50692	.	-	0	ID=cds-WP_001537782.1;Parent=gene-C9E94_RS15085;Dbxref=GenBank:WP_001537782.1;Name=WP_001537782.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=C9E94_RS15085;product=CoA-binding protein;protein_id=WP_001537782.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	50866	51528	.	+	.	ID=gene-C9E94_RS15090;Name=C9E94_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15090;old_locus_tag=C9E94_15470
NZ_PYJR01000101.1	Protein Homology	CDS	50866	51528	.	+	0	ID=cds-WP_000847719.1;Parent=gene-C9E94_RS15090;Dbxref=GenBank:WP_000847719.1;Name=WP_000847719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460051.1;locus_tag=C9E94_RS15090;product=DUF2057 family protein;protein_id=WP_000847719.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	51623	52081	.	+	.	ID=gene-C9E94_RS15095;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=C9E94_RS15095;old_locus_tag=C9E94_15475
NZ_PYJR01000101.1	Protein Homology	CDS	51623	52081	.	+	0	ID=cds-WP_000424187.1;Parent=gene-C9E94_RS15095;Dbxref=GenBank:WP_000424187.1;Name=WP_000424187.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460050.1;locus_tag=C9E94_RS15095;product=methylglyoxal synthase;protein_id=WP_000424187.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	52117	54171	.	-	.	ID=gene-C9E94_RS15100;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=C9E94_RS15100;old_locus_tag=C9E94_15480
NZ_PYJR01000101.1	Protein Homology	CDS	52117	54171	.	-	0	ID=cds-WP_017465794.1;Parent=gene-C9E94_RS15100;Dbxref=GenBank:WP_017465794.1;Name=WP_017465794.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460049.1;locus_tag=C9E94_RS15100;product=DNA helicase IV;protein_id=WP_017465794.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	54295	54741	.	+	.	ID=gene-C9E94_RS15105;Name=C9E94_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15105;old_locus_tag=C9E94_15485
NZ_PYJR01000101.1	Protein Homology	CDS	54295	54741	.	+	0	ID=cds-WP_001261222.1;Parent=gene-C9E94_RS15105;Dbxref=GenBank:WP_001261222.1;Name=WP_001261222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460048.1;locus_tag=C9E94_RS15105;product=YccF domain-containing protein;protein_id=WP_001261222.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	54760	56913	.	+	.	ID=gene-C9E94_RS15110;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=C9E94_RS15110;old_locus_tag=C9E94_15490
NZ_PYJR01000101.1	Protein Homology	CDS	54760	56913	.	+	0	ID=cds-WP_000950876.1;Parent=gene-C9E94_RS15110;Dbxref=GenBank:WP_000950876.1;Name=WP_000950876.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460047.1;locus_tag=C9E94_RS15110;product=YccS family putative transporter;protein_id=WP_000950876.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	56900	57505	.	-	.	ID=gene-C9E94_RS15115;Name=C9E94_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15115;old_locus_tag=C9E94_15495
NZ_PYJR01000101.1	Protein Homology	CDS	56900	57505	.	-	0	ID=cds-WP_080111150.1;Parent=gene-C9E94_RS15115;Dbxref=GenBank:WP_080111150.1;Name=WP_080111150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460046.1;locus_tag=C9E94_RS15115;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_080111150.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	57722	58231	.	+	.	ID=gene-C9E94_RS15120;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=C9E94_RS15120;old_locus_tag=C9E94_15500
NZ_PYJR01000101.1	Protein Homology	CDS	57722	58231	.	+	0	ID=cds-WP_000288732.1;Parent=gene-C9E94_RS15120;Dbxref=GenBank:WP_000288732.1;Name=WP_000288732.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460045.1;locus_tag=C9E94_RS15120;product=SOS-induced cell division inhibitor SulA;protein_id=WP_000288732.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	58588	59640	.	+	.	ID=gene-C9E94_RS15125;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=C9E94_RS15125;old_locus_tag=C9E94_15505
NZ_PYJR01000101.1	Protein Homology	CDS	58588	59640	.	+	0	ID=cds-WP_023193195.1;Parent=gene-C9E94_RS15125;Dbxref=GenBank:WP_023193195.1;Name=WP_023193195.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460044.1;locus_tag=C9E94_RS15125;product=porin OmpA;protein_id=WP_023193195.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	59712	60164	.	-	.	ID=gene-C9E94_RS15130;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=C9E94_RS15130;old_locus_tag=C9E94_15510
NZ_PYJR01000101.1	Protein Homology	CDS	59712	60164	.	-	0	ID=cds-WP_079960475.1;Parent=gene-C9E94_RS15130;Dbxref=GenBank:WP_079960475.1;Name=WP_079960475.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460043.1;locus_tag=C9E94_RS15130;product=macrodomain Ter protein MatP;protein_id=WP_079960475.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	60350	62110	.	+	.	ID=gene-C9E94_RS15135;Name=C9E94_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15135;old_locus_tag=C9E94_15515
NZ_PYJR01000101.1	Protein Homology	CDS	60350	62110	.	+	0	ID=cds-WP_000156448.1;Parent=gene-C9E94_RS15135;Dbxref=GenBank:WP_000156448.1;Name=WP_000156448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460042.1;locus_tag=C9E94_RS15135;product=AAA family ATPase;protein_id=WP_000156448.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	62179	62697	.	+	.	ID=gene-C9E94_RS15140;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=C9E94_RS15140;old_locus_tag=C9E94_15520
NZ_PYJR01000101.1	Protein Homology	CDS	62179	62697	.	+	0	ID=cds-WP_000227928.1;Parent=gene-C9E94_RS15140;Dbxref=GenBank:WP_000227928.1;Name=WP_000227928.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=C9E94_RS15140;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_000227928.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	62797	62964	.	-	.	ID=gene-C9E94_RS15145;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=C9E94_RS15145;old_locus_tag=C9E94_15525
NZ_PYJR01000101.1	Protein Homology	CDS	62797	62964	.	-	0	ID=cds-WP_001537784.1;Parent=gene-C9E94_RS15145;Dbxref=GenBank:WP_001537784.1;Name=WP_001537784.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=C9E94_RS15145;product=ribosome modulation factor;protein_id=WP_001537784.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	63220	63783	.	-	.	ID=gene-C9E94_RS15150;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=C9E94_RS15150;old_locus_tag=C9E94_15530
NZ_PYJR01000101.1	Protein Homology	CDS	63220	63783	.	-	0	ID=cds-WP_000759136.1;Parent=gene-C9E94_RS15150;Dbxref=GenBank:WP_000759136.1;Name=WP_000759136.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460039.1;locus_tag=C9E94_RS15150;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_000759136.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	63780	65420	.	-	.	ID=gene-C9E94_RS15155;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=C9E94_RS15155;old_locus_tag=C9E94_15535
NZ_PYJR01000101.1	Protein Homology	CDS	63780	65420	.	-	0	ID=cds-WP_000433414.1;Parent=gene-C9E94_RS15155;Dbxref=GenBank:WP_000433414.1;Name=WP_000433414.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460038.1;locus_tag=C9E94_RS15155;product=intermembrane transport protein PqiB;protein_id=WP_000433414.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	65425	66678	.	-	.	ID=gene-C9E94_RS15160;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=C9E94_RS15160;old_locus_tag=C9E94_15540
NZ_PYJR01000101.1	Protein Homology	CDS	65425	66678	.	-	0	ID=cds-WP_000333152.1;Parent=gene-C9E94_RS15160;Dbxref=GenBank:WP_000333152.1;Name=WP_000333152.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460037.1;locus_tag=C9E94_RS15160;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_000333152.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	66693	68600	.	-	.	ID=gene-C9E94_RS15165;Name=C9E94_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15165;old_locus_tag=C9E94_15545
NZ_PYJR01000101.1	Protein Homology	CDS	66693	68600	.	-	0	ID=cds-WP_001617362.1;Parent=gene-C9E94_RS15165;Dbxref=GenBank:WP_001617362.1;Name=WP_001617362.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=C9E94_RS15165;product=ABC transporter ATP-binding protein;protein_id=WP_001617362.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	68613	70721	.	-	.	ID=gene-C9E94_RS15170;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=C9E94_RS15170;old_locus_tag=C9E94_15550
NZ_PYJR01000101.1	Protein Homology	CDS	68613	70721	.	-	0	ID=cds-WP_079802348.1;Parent=gene-C9E94_RS15170;Dbxref=GenBank:WP_079802348.1;Name=WP_079802348.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460035.1;locus_tag=C9E94_RS15170;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_079802348.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	70820	71929	.	+	.	ID=gene-C9E94_RS15175;Name=C9E94_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15175;old_locus_tag=C9E94_15555
NZ_PYJR01000101.1	Protein Homology	CDS	70820	71929	.	+	0	ID=cds-WP_000224073.1;Parent=gene-C9E94_RS15175;Dbxref=GenBank:WP_000224073.1;Name=WP_000224073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460034.1;locus_tag=C9E94_RS15175;product=YcbX family protein;protein_id=WP_000224073.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	71926	72468	.	-	.	ID=gene-C9E94_RS15180;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=C9E94_RS15180;old_locus_tag=C9E94_15560
NZ_PYJR01000101.1	Protein Homology	CDS	71926	72468	.	-	0	ID=cds-WP_001220671.1;Parent=gene-C9E94_RS15180;Dbxref=GenBank:WP_001220671.1;Name=WP_001220671.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460033.1;locus_tag=C9E94_RS15180;product=cell division protein ZapC;protein_id=WP_001220671.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	72634	73644	.	-	.	ID=gene-C9E94_RS15185;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=C9E94_RS15185;old_locus_tag=C9E94_15565
NZ_PYJR01000101.1	Protein Homology	CDS	72634	73644	.	-	0	ID=cds-WP_000291723.1;Parent=gene-C9E94_RS15185;Dbxref=GenBank:WP_000291723.1;Name=WP_000291723.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460032.1;locus_tag=C9E94_RS15185;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_000291723.1;transl_table=11
NZ_PYJR01000101.1	RefSeq	gene	73852	76464	.	-	.	ID=gene-C9E94_RS15190;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=C9E94_RS15190;old_locus_tag=C9E94_15570
NZ_PYJR01000101.1	Protein Homology	CDS	73852	76464	.	-	0	ID=cds-WP_135401116.1;Parent=gene-C9E94_RS15190;Dbxref=GenBank:WP_135401116.1;Name=WP_135401116.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=C9E94_RS15190;product=aminopeptidase N;protein_id=WP_135401116.1;transl_table=11
##sequence-region NZ_PYJR01000133.1 1 392096
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000133.1	RefSeq	region	1	392096	.	+	.	ID=NZ_PYJR01000133.1:1..392096;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000133.1	RefSeq	gene	1	264	.	-	.	ID=gene-C9E94_RS19545;Name=C9E94_RS19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19545;old_locus_tag=C9E94_20040;partial=true;start_range=.,1
NZ_PYJR01000133.1	Protein Homology	CDS	1	264	.	-	0	ID=cds-WP_167853657.1;Parent=gene-C9E94_RS19545;Dbxref=GenBank:WP_167853657.1;Name=WP_167853657.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000954687.1;locus_tag=C9E94_RS19545;partial=true;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_167853657.1;start_range=.,1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	457	945	.	-	.	ID=gene-C9E94_RS19550;Name=C9E94_RS19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19550;old_locus_tag=C9E94_20045
NZ_PYJR01000133.1	Protein Homology	CDS	457	945	.	-	0	ID=cds-WP_001293638.1;Parent=gene-C9E94_RS19550;Dbxref=GenBank:WP_001293638.1;Name=WP_001293638.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460507.1;locus_tag=C9E94_RS19550;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_001293638.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	990	2396	.	+	.	ID=gene-C9E94_RS19555;Name=C9E94_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19555;old_locus_tag=C9E94_20050
NZ_PYJR01000133.1	Protein Homology	CDS	990	2396	.	+	0	ID=cds-WP_135401190.1;Parent=gene-C9E94_RS19555;Dbxref=GenBank:WP_135401190.1;Name=WP_135401190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460506.1;locus_tag=C9E94_RS19555;product=FAD-dependent oxidoreductase;protein_id=WP_135401190.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	2386	3627	.	+	.	ID=gene-C9E94_RS19560;Name=C9E94_RS19560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19560;old_locus_tag=C9E94_20055
NZ_PYJR01000133.1	Protein Homology	CDS	2386	3627	.	+	0	ID=cds-WP_080219082.1;Parent=gene-C9E94_RS19560;Dbxref=GenBank:WP_080219082.1;Name=WP_080219082.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460505.1;locus_tag=C9E94_RS19560;product=MFS transporter;protein_id=WP_080219082.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	3697	5253	.	+	.	ID=gene-C9E94_RS19565;Name=C9E94_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19565;old_locus_tag=C9E94_20060
NZ_PYJR01000133.1	Protein Homology	CDS	3697	5253	.	+	0	ID=cds-WP_000476923.1;Parent=gene-C9E94_RS19565;Dbxref=GenBank:WP_000476923.1;Name=WP_000476923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460504.1;locus_tag=C9E94_RS19565;product=PhoPQ-activated pathogenicity-related family protein;protein_id=WP_000476923.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	5430	6716	.	+	.	ID=gene-C9E94_RS19570;Name=C9E94_RS19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19570;old_locus_tag=C9E94_20065
NZ_PYJR01000133.1	Protein Homology	CDS	5430	6716	.	+	0	ID=cds-WP_000824240.1;Parent=gene-C9E94_RS19570;Dbxref=GenBank:WP_000824240.1;Name=WP_000824240.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460503.1;locus_tag=C9E94_RS19570;product=MFS transporter;protein_id=WP_000824240.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	6691	7716	.	+	.	ID=gene-C9E94_RS19575;Name=C9E94_RS19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19575;old_locus_tag=C9E94_20070
NZ_PYJR01000133.1	Protein Homology	CDS	6691	7716	.	+	0	ID=cds-WP_000864924.1;Parent=gene-C9E94_RS19575;Dbxref=GenBank:WP_000864924.1;Name=WP_000864924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460502.1;locus_tag=C9E94_RS19575;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_000864924.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	7775	8566	.	-	.	ID=gene-C9E94_RS19580;Name=C9E94_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19580;old_locus_tag=C9E94_20075
NZ_PYJR01000133.1	Protein Homology	CDS	7775	8566	.	-	0	ID=cds-WP_001518759.1;Parent=gene-C9E94_RS19580;Dbxref=GenBank:WP_001518759.1;Name=WP_001518759.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460501.1;locus_tag=C9E94_RS19580;product=FadR/GntR family transcriptional regulator;protein_id=WP_001518759.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	8612	9703	.	-	.	ID=gene-C9E94_RS19585;Name=C9E94_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19585;old_locus_tag=C9E94_20080
NZ_PYJR01000133.1	Protein Homology	CDS	8612	9703	.	-	0	ID=cds-WP_000976503.1;Parent=gene-C9E94_RS19585;Dbxref=GenBank:WP_000976503.1;Name=WP_000976503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460500.1;locus_tag=C9E94_RS19585;product=choloylglycine hydrolase family protein;protein_id=WP_000976503.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	10122	11225	.	+	.	ID=gene-C9E94_RS19590;Name=C9E94_RS19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19590;old_locus_tag=C9E94_20085
NZ_PYJR01000133.1	Protein Homology	CDS	10122	11225	.	+	0	ID=cds-WP_001194448.1;Parent=gene-C9E94_RS19590;Dbxref=GenBank:WP_001194448.1;Name=WP_001194448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460499.1;locus_tag=C9E94_RS19590;product=hydrogenase small subunit;protein_id=WP_001194448.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	11228	13030	.	+	.	ID=gene-C9E94_RS19595;Name=C9E94_RS19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19595;old_locus_tag=C9E94_20090
NZ_PYJR01000133.1	Protein Homology	CDS	11228	13030	.	+	0	ID=cds-WP_000331200.1;Parent=gene-C9E94_RS19595;Dbxref=GenBank:WP_000331200.1;Name=WP_000331200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=C9E94_RS19595;product=nickel-dependent hydrogenase large subunit;protein_id=WP_000331200.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	12981	13724	.	+	.	ID=gene-C9E94_RS19600;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=C9E94_RS19600;old_locus_tag=C9E94_20095
NZ_PYJR01000133.1	Protein Homology	CDS	12981	13724	.	+	0	ID=cds-WP_000924456.1;Parent=gene-C9E94_RS19600;Dbxref=GenBank:WP_000924456.1;Name=WP_000924456.1;Ontology_term=GO:0022904,GO:0005506,GO:0009055,GO:0016020;gbkey=CDS;gene=cybH;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460497.1;locus_tag=C9E94_RS19600;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=WP_000924456.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	13730	14338	.	+	.	ID=gene-C9E94_RS19605;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=C9E94_RS19605;old_locus_tag=C9E94_20100
NZ_PYJR01000133.1	Protein Homology	CDS	13730	14338	.	+	0	ID=cds-WP_000852665.1;Parent=gene-C9E94_RS19605;Dbxref=GenBank:WP_000852665.1;Name=WP_000852665.1;Ontology_term=GO:0051604,GO:0004190,GO:0046872,GO:0009375;gbkey=CDS;gene=hybD;go_component=ferredoxin hydrogenase complex|0009375||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA,metal ion binding|0046872||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460496.1;locus_tag=C9E94_RS19605;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_000852665.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	14338	14637	.	+	.	ID=gene-C9E94_RS19610;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=C9E94_RS19610;old_locus_tag=C9E94_20105
NZ_PYJR01000133.1	Protein Homology	CDS	14338	14637	.	+	0	ID=cds-WP_045716875.1;Parent=gene-C9E94_RS19610;Dbxref=GenBank:WP_045716875.1;Name=WP_045716875.1;Ontology_term=GO:0065003,GO:0016530,GO:0051082;gbkey=CDS;gene=hypC;go_function=metallochaperone activity|0016530||IEA,unfolded protein binding|0051082||IEA;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460495.1;locus_tag=C9E94_RS19610;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WP_045716875.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	14634	15044	.	+	.	ID=gene-C9E94_RS19615;Name=C9E94_RS19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19615;old_locus_tag=C9E94_20110
NZ_PYJR01000133.1	Protein Homology	CDS	14634	15044	.	+	0	ID=cds-WP_000155978.1;Parent=gene-C9E94_RS19615;Dbxref=GenBank:WP_000155978.1;Name=WP_000155978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460494.1;locus_tag=C9E94_RS19615;product=hydrogenase;protein_id=WP_000155978.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	15062	16123	.	+	.	ID=gene-C9E94_RS19620;Name=C9E94_RS19620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19620;old_locus_tag=C9E94_20115
NZ_PYJR01000133.1	Protein Homology	CDS	15062	16123	.	+	0	ID=cds-WP_135401191.1;Parent=gene-C9E94_RS19620;Dbxref=GenBank:WP_135401191.1;Name=WP_135401191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460493.1;locus_tag=C9E94_RS19620;product=hydrogenase expression/formation C-terminal domain-containing protein;protein_id=WP_135401191.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	16111	16998	.	+	.	ID=gene-C9E94_RS19625;Name=C9E94_RS19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19625;old_locus_tag=C9E94_20120
NZ_PYJR01000133.1	Protein Homology	CDS	16111	16998	.	+	0	ID=cds-WP_001189394.1;Parent=gene-C9E94_RS19625;Dbxref=GenBank:WP_001189394.1;Name=WP_001189394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460492.1;locus_tag=C9E94_RS19625;product=ATP/GTP-binding protein;protein_id=WP_001189394.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	17011	17352	.	+	.	ID=gene-C9E94_RS19630;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=C9E94_RS19630;old_locus_tag=C9E94_20125
NZ_PYJR01000133.1	Protein Homology	CDS	17011	17352	.	+	0	ID=cds-WP_000544772.1;Parent=gene-C9E94_RS19630;Dbxref=GenBank:WP_000544772.1;Name=WP_000544772.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460491.1;locus_tag=C9E94_RS19630;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544772.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	17493	18611	.	-	.	ID=gene-C9E94_RS19635;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=C9E94_RS19635;old_locus_tag=C9E94_20130
NZ_PYJR01000133.1	Protein Homology	CDS	17493	18611	.	-	0	ID=cds-WP_000758335.1;Parent=gene-C9E94_RS19635;Dbxref=GenBank:WP_000758335.1;Name=WP_000758335.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460490.1;locus_tag=C9E94_RS19635;product=porin OmpC;protein_id=WP_000758335.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	19328	19870	.	+	.	ID=gene-C9E94_RS19640;Name=C9E94_RS19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19640;old_locus_tag=C9E94_20135
NZ_PYJR01000133.1	Protein Homology	CDS	19328	19870	.	+	0	ID=cds-WP_000513122.1;Parent=gene-C9E94_RS19640;Dbxref=GenBank:WP_000513122.1;Name=WP_000513122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460488.1;locus_tag=C9E94_RS19640;product=YybH family protein;protein_id=WP_000513122.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	19926	20840	.	-	.	ID=gene-C9E94_RS19645;Name=C9E94_RS19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19645;old_locus_tag=C9E94_20140
NZ_PYJR01000133.1	Protein Homology	CDS	19926	20840	.	-	0	ID=cds-WP_001748393.1;Parent=gene-C9E94_RS19645;Dbxref=GenBank:WP_001748393.1;Name=WP_001748393.1;Ontology_term=GO:0005254;gbkey=CDS;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=C9E94_RS19645;product=bestrophin family protein;protein_id=WP_001748393.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	21096	21455	.	-	.	ID=gene-C9E94_RS19650;Name=C9E94_RS19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19650;old_locus_tag=C9E94_20145
NZ_PYJR01000133.1	Protein Homology	CDS	21096	21455	.	-	0	ID=cds-WP_000992449.1;Parent=gene-C9E94_RS19650;Dbxref=GenBank:WP_000992449.1;Name=WP_000992449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460486.1;locus_tag=C9E94_RS19650;product=DUF4186 domain-containing protein;protein_id=WP_000992449.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	21455	22381	.	-	.	ID=gene-C9E94_RS19655;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=C9E94_RS19655;old_locus_tag=C9E94_20150
NZ_PYJR01000133.1	Protein Homology	CDS	21455	22381	.	-	0	ID=cds-WP_000090081.1;Parent=gene-C9E94_RS19655;Dbxref=GenBank:WP_000090081.1;Name=WP_000090081.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=C9E94_RS19655;product=glutaminase B;protein_id=WP_000090081.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	22454	23842	.	-	.	ID=gene-C9E94_RS19660;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=C9E94_RS19660;old_locus_tag=C9E94_20155
NZ_PYJR01000133.1	Protein Homology	CDS	22454	23842	.	-	0	ID=cds-WP_020898754.1;Parent=gene-C9E94_RS19660;Dbxref=GenBank:WP_020898754.1;Name=WP_020898754.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460484.1;locus_tag=C9E94_RS19660;product=succinate-semialdehyde dehydrogenase;protein_id=WP_020898754.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	23945	24817	.	+	.	ID=gene-C9E94_RS19665;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=C9E94_RS19665;old_locus_tag=C9E94_20160
NZ_PYJR01000133.1	Protein Homology	CDS	23945	24817	.	+	0	ID=cds-WP_000366534.1;Parent=gene-C9E94_RS19665;Dbxref=GenBank:WP_000366534.1;Name=WP_000366534.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460483.1;locus_tag=C9E94_RS19665;product=putrescine utilization regulator PtrR;protein_id=WP_000366534.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	24933	26123	.	+	.	ID=gene-C9E94_RS19675;Name=C9E94_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19675;old_locus_tag=C9E94_20170
NZ_PYJR01000133.1	Protein Homology	CDS	24933	26123	.	+	0	ID=cds-WP_135401192.1;Parent=gene-C9E94_RS19675;Dbxref=GenBank:WP_135401192.1;Name=WP_135401192.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460482.1;locus_tag=C9E94_RS19675;product=sugar transporter;protein_id=WP_135401192.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	26170	26835	.	-	.	ID=gene-C9E94_RS19680;Name=C9E94_RS19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19680;old_locus_tag=C9E94_20175
NZ_PYJR01000133.1	Protein Homology	CDS	26170	26835	.	-	0	ID=cds-WP_000968968.1;Parent=gene-C9E94_RS19680;Dbxref=GenBank:WP_000968968.1;Name=WP_000968968.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460481.1;locus_tag=C9E94_RS19680;product=MarC family NAAT transporter;protein_id=WP_000968968.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	27094	27528	.	+	.	ID=gene-C9E94_RS19685;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=C9E94_RS19685;old_locus_tag=C9E94_20180
NZ_PYJR01000133.1	Protein Homology	CDS	27094	27528	.	+	0	ID=cds-WP_000843434.1;Parent=gene-C9E94_RS19685;Dbxref=GenBank:WP_000843434.1;Name=WP_000843434.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460480.1;locus_tag=C9E94_RS19685;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_000843434.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	27548	27931	.	+	.	ID=gene-C9E94_RS19690;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=C9E94_RS19690;old_locus_tag=C9E94_20185
NZ_PYJR01000133.1	Protein Homology	CDS	27548	27931	.	+	0	ID=cds-WP_000091194.1;Parent=gene-C9E94_RS19690;Dbxref=GenBank:WP_000091194.1;Name=WP_000091194.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091194.1;locus_tag=C9E94_RS19690;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_000091194.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	27960	28175	.	+	.	ID=gene-C9E94_RS19695;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=C9E94_RS19695;old_locus_tag=C9E94_20190
NZ_PYJR01000133.1	Protein Homology	CDS	27960	28175	.	+	0	ID=cds-WP_000783049.1;Parent=gene-C9E94_RS19695;Dbxref=GenBank:WP_000783049.1;Name=WP_000783049.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460478.1;locus_tag=C9E94_RS19695;product=multiple antibiotic resistance protein MarB;protein_id=WP_000783049.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	28294	29196	.	-	.	ID=gene-C9E94_RS19700;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=C9E94_RS19700;old_locus_tag=C9E94_20195
NZ_PYJR01000133.1	Protein Homology	CDS	28294	29196	.	-	0	ID=cds-WP_000987753.1;Parent=gene-C9E94_RS19700;Dbxref=GenBank:WP_000987753.1;Name=WP_000987753.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460477.1;locus_tag=C9E94_RS19700;product=O-acetylserine/cysteine exporter;protein_id=WP_000987753.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	29424	30611	.	+	.	ID=gene-C9E94_RS19705;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=C9E94_RS19705;old_locus_tag=C9E94_20200
NZ_PYJR01000133.1	Protein Homology	CDS	29424	30611	.	+	0	ID=cds-WP_001068050.1;Parent=gene-C9E94_RS19705;Dbxref=GenBank:WP_001068050.1;Name=WP_001068050.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460476.1;locus_tag=C9E94_RS19705;product=efflux MFS transporter YdeE;protein_id=WP_001068050.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	30859	30954	.	+	.	ID=gene-C9E94_RS19710;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=C9E94_RS19710;old_locus_tag=C9E94_20205
NZ_PYJR01000133.1	Protein Homology	CDS	30859	30954	.	+	0	ID=cds-WP_000901531.1;Parent=gene-C9E94_RS19710;Dbxref=GenBank:WP_000901531.1;Name=WP_000901531.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=C9E94_RS19710;product=protein MgtS;protein_id=WP_000901531.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	31302	31694	.	-	.	ID=gene-C9E94_RS19715;Name=C9E94_RS19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19715;old_locus_tag=C9E94_20210
NZ_PYJR01000133.1	Protein Homology	CDS	31302	31694	.	-	0	ID=cds-WP_000776348.1;Parent=gene-C9E94_RS19715;Dbxref=GenBank:WP_000776348.1;Name=WP_000776348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460475.1;locus_tag=C9E94_RS19715;product=YdeI family stress tolerance OB fold protein;protein_id=WP_000776348.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	32121	32648	.	+	.	ID=gene-C9E94_RS19720;Name=C9E94_RS19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19720;old_locus_tag=C9E94_20215
NZ_PYJR01000133.1	Protein Homology	CDS	32121	32648	.	+	0	ID=cds-WP_001235357.1;Parent=gene-C9E94_RS19720;Dbxref=GenBank:WP_001235357.1;Name=WP_001235357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460474.1;locus_tag=C9E94_RS19720;product=2-oxo-tetronate isomerase;protein_id=WP_001235357.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	32768	32950	.	-	.	ID=gene-C9E94_RS19725;Name=C9E94_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19725;old_locus_tag=C9E94_20220
NZ_PYJR01000133.1	Protein Homology	CDS	32768	32950	.	-	0	ID=cds-WP_000807642.1;Parent=gene-C9E94_RS19725;Dbxref=GenBank:WP_000807642.1;Name=WP_000807642.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460473.1;locus_tag=C9E94_RS19725;product=general stress protein;protein_id=WP_000807642.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	33294	35336	.	-	.	ID=gene-C9E94_RS19730;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=C9E94_RS19730;old_locus_tag=C9E94_20225
NZ_PYJR01000133.1	Protein Homology	CDS	33294	35336	.	-	0	ID=cds-WP_135401193.1;Parent=gene-C9E94_RS19730;Dbxref=GenBank:WP_135401193.1;Name=WP_135401193.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460472.1;locus_tag=C9E94_RS19730;product=peptidyl-dipeptidase Dcp;protein_id=WP_135401193.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	35475	36221	.	+	.	ID=gene-C9E94_RS19735;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=C9E94_RS19735;old_locus_tag=C9E94_20230
NZ_PYJR01000133.1	Protein Homology	CDS	35475	36221	.	+	0	ID=cds-WP_000636564.1;Parent=gene-C9E94_RS19735;Dbxref=GenBank:WP_000636564.1;Name=WP_000636564.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460471.1;locus_tag=C9E94_RS19735;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_000636564.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	36351	37037	.	+	.	ID=gene-C9E94_RS19740;Name=C9E94_RS19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19740;old_locus_tag=C9E94_20235
NZ_PYJR01000133.1	Protein Homology	CDS	36351	37037	.	+	0	ID=cds-WP_000215562.1;Parent=gene-C9E94_RS19740;Dbxref=GenBank:WP_000215562.1;Name=WP_000215562.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460470.1;locus_tag=C9E94_RS19740;product=GntR family transcriptional regulator;protein_id=WP_000215562.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	37218	37421	.	+	.	ID=gene-C9E94_RS19745;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=C9E94_RS19745;old_locus_tag=C9E94_20240
NZ_PYJR01000133.1	Protein Homology	CDS	37218	37421	.	+	0	ID=cds-WP_000989267.1;Parent=gene-C9E94_RS19745;Dbxref=GenBank:WP_000989267.1;Name=WP_000989267.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460469.1;locus_tag=C9E94_RS19745;product=putative selenium delivery protein YdfZ;protein_id=WP_000989267.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	37488	38954	.	-	.	ID=gene-C9E94_RS19750;Name=C9E94_RS19750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19750;old_locus_tag=C9E94_20245
NZ_PYJR01000133.1	Protein Homology	CDS	37488	38954	.	-	0	ID=cds-WP_079943511.1;Parent=gene-C9E94_RS19750;Dbxref=GenBank:WP_079943511.1;Name=WP_079943511.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460468.1;locus_tag=C9E94_RS19750;product=mannitol dehydrogenase family protein;protein_id=WP_079943511.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	39098	40477	.	-	.	ID=gene-C9E94_RS19755;Name=C9E94_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19755;old_locus_tag=C9E94_20250
NZ_PYJR01000133.1	Protein Homology	CDS	39098	40477	.	-	0	ID=cds-WP_000192118.1;Parent=gene-C9E94_RS19755;Dbxref=GenBank:WP_000192118.1;Name=WP_000192118.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210164.1;locus_tag=C9E94_RS19755;product=MFS transporter;protein_id=WP_000192118.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	40531	41550	.	-	.	ID=gene-C9E94_RS19760;Name=C9E94_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19760;old_locus_tag=C9E94_20255
NZ_PYJR01000133.1	Protein Homology	CDS	40531	41550	.	-	0	ID=cds-WP_000836496.1;Parent=gene-C9E94_RS19760;Dbxref=GenBank:WP_000836496.1;Name=WP_000836496.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460466.1;locus_tag=C9E94_RS19760;product=Zn-dependent oxidoreductase;protein_id=WP_000836496.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	41561	42775	.	-	.	ID=gene-C9E94_RS19765;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=C9E94_RS19765;old_locus_tag=C9E94_20260
NZ_PYJR01000133.1	Protein Homology	CDS	41561	42775	.	-	0	ID=cds-WP_000706265.1;Parent=gene-C9E94_RS19765;Dbxref=GenBank:WP_000706265.1;Name=WP_000706265.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=C9E94_RS19765;product=starvation-sensing protein RspA;protein_id=WP_000706265.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	42897	43223	.	-	.	ID=gene-C9E94_RS19770;Name=C9E94_RS19770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19770;old_locus_tag=C9E94_20265
NZ_PYJR01000133.1	Protein Homology	CDS	42897	43223	.	-	0	ID=cds-WP_000921389.1;Parent=gene-C9E94_RS19770;Dbxref=GenBank:WP_000921389.1;Name=WP_000921389.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460464.1;locus_tag=C9E94_RS19770;product=YnfA family protein;protein_id=WP_000921389.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	43376	43717	.	+	.	ID=gene-C9E94_RS19775;Name=C9E94_RS19775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19775;old_locus_tag=C9E94_20270
NZ_PYJR01000133.1	Protein Homology	CDS	43376	43717	.	+	0	ID=cds-WP_001066440.1;Parent=gene-C9E94_RS19775;Dbxref=GenBank:WP_001066440.1;Name=WP_001066440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460463.1;locus_tag=C9E94_RS19775;product=DUF1283 family protein;protein_id=WP_001066440.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	43753	44313	.	+	.	ID=gene-C9E94_RS19780;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=C9E94_RS19780;old_locus_tag=C9E94_20275
NZ_PYJR01000133.1	Protein Homology	CDS	43753	44313	.	+	0	ID=cds-WP_000199997.1;Parent=gene-C9E94_RS19780;Dbxref=GenBank:WP_000199997.1;Name=WP_000199997.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460462.1;locus_tag=C9E94_RS19780;product=spermidine N1-acetyltransferase;protein_id=WP_000199997.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	44354	45064	.	-	.	ID=gene-C9E94_RS19785;Name=C9E94_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19785;old_locus_tag=C9E94_20280
NZ_PYJR01000133.1	Protein Homology	CDS	44354	45064	.	-	0	ID=cds-WP_000743122.1;Parent=gene-C9E94_RS19785;Dbxref=GenBank:WP_000743122.1;Name=WP_000743122.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465701.1;locus_tag=C9E94_RS19785;product=YnfC family lipoprotein;protein_id=WP_000743122.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	45168	45476	.	+	.	ID=gene-C9E94_RS19790;Name=C9E94_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19790;old_locus_tag=C9E94_20285
NZ_PYJR01000133.1	Protein Homology	CDS	45168	45476	.	+	0	ID=cds-WP_000975516.1;Parent=gene-C9E94_RS19790;Dbxref=GenBank:WP_000975516.1;Name=WP_000975516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460460.1;locus_tag=C9E94_RS19790;product=DUF1161 domain-containing protein;protein_id=WP_000975516.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	45633	48071	.	+	.	ID=gene-C9E94_RS19795;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=protein_coding;locus_tag=C9E94_RS19795;old_locus_tag=C9E94_20290
NZ_PYJR01000133.1	Protein Homology	CDS	45633	48071	.	+	0	ID=cds-WP_020438091.1;Parent=gene-C9E94_RS19795;Dbxref=GenBank:WP_020438091.1;Name=WP_020438091.1;gbkey=CDS;gene=ynfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006788576.1;locus_tag=C9E94_RS19795;product=selenate/tellurate reductase subunit YnfE;protein_id=WP_020438091.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	48170	50605	.	+	.	ID=gene-C9E94_RS19800;Name=ynfF;gbkey=Gene;gene=ynfF;gene_biotype=protein_coding;locus_tag=C9E94_RS19800;old_locus_tag=C9E94_20295
NZ_PYJR01000133.1	Protein Homology	CDS	48170	50605	.	+	0	ID=cds-WP_135401194.1;Parent=gene-C9E94_RS19800;Dbxref=GenBank:WP_135401194.1;Name=WP_135401194.1;gbkey=CDS;gene=ynfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460458.1;locus_tag=C9E94_RS19800;product=selenate/tellurate reductase subunit YnfF;protein_id=WP_135401194.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	50616	51233	.	+	.	ID=gene-C9E94_RS19805;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=C9E94_RS19805;old_locus_tag=C9E94_20300
NZ_PYJR01000133.1	Protein Homology	CDS	50616	51233	.	+	0	ID=cds-WP_000213069.1;Parent=gene-C9E94_RS19805;Dbxref=GenBank:WP_000213069.1;Name=WP_000213069.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=C9E94_RS19805;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_000213069.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	51235	52092	.	+	.	ID=gene-C9E94_RS19810;Name=C9E94_RS19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19810;old_locus_tag=C9E94_20305
NZ_PYJR01000133.1	Protein Homology	CDS	51235	52092	.	+	0	ID=cds-WP_017465699.1;Parent=gene-C9E94_RS19810;Dbxref=GenBank:WP_017465699.1;Name=WP_017465699.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460456.1;locus_tag=C9E94_RS19810;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_017465699.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	52135	52749	.	+	.	ID=gene-C9E94_RS19815;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=C9E94_RS19815;old_locus_tag=C9E94_20310
NZ_PYJR01000133.1	Protein Homology	CDS	52135	52749	.	+	0	ID=cds-WP_022544647.1;Parent=gene-C9E94_RS19815;Dbxref=GenBank:WP_022544647.1;Name=WP_022544647.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460455.1;locus_tag=C9E94_RS19815;product=Tat proofreading chaperone DmsD;protein_id=WP_022544647.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	53054	53764	.	+	.	ID=gene-C9E94_RS19820;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=C9E94_RS19820;old_locus_tag=C9E94_20315
NZ_PYJR01000133.1	Protein Homology	CDS	53054	53764	.	+	0	ID=cds-WP_000557304.1;Parent=gene-C9E94_RS19820;Dbxref=GenBank:WP_000557304.1;Name=WP_000557304.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460454.1;locus_tag=C9E94_RS19820;product=osmoprotectant ABC transporter permease OsmY;protein_id=WP_000557304.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	53793	54695	.	+	.	ID=gene-C9E94_RS19825;Name=osmX;gbkey=Gene;gene=osmX;gene_biotype=protein_coding;locus_tag=C9E94_RS19825;old_locus_tag=C9E94_20320
NZ_PYJR01000133.1	Protein Homology	CDS	53793	54695	.	+	0	ID=cds-WP_001211193.1;Parent=gene-C9E94_RS19825;Dbxref=GenBank:WP_001211193.1;Name=WP_001211193.1;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460453.1;locus_tag=C9E94_RS19825;product=osmoprotectant ABC transporter substrate-binding protein OsmX;protein_id=WP_001211193.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	54705	55352	.	+	.	ID=gene-C9E94_RS19830;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=C9E94_RS19830;old_locus_tag=C9E94_20325
NZ_PYJR01000133.1	Protein Homology	CDS	54705	55352	.	+	0	ID=cds-WP_000379677.1;Parent=gene-C9E94_RS19830;Dbxref=GenBank:WP_000379677.1;Name=WP_000379677.1;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460452.1;locus_tag=C9E94_RS19830;product=osmoprotectant ABC transporter permease OsmW;protein_id=WP_000379677.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	55352	56500	.	+	.	ID=gene-C9E94_RS19835;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=C9E94_RS19835;old_locus_tag=C9E94_20330
NZ_PYJR01000133.1	Protein Homology	CDS	55352	56500	.	+	0	ID=cds-WP_000593089.1;Parent=gene-C9E94_RS19835;Dbxref=GenBank:WP_000593089.1;Name=WP_000593089.1;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460451.1;locus_tag=C9E94_RS19835;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=WP_000593089.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	56636	57925	.	+	.	ID=gene-C9E94_RS19840;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=C9E94_RS19840;old_locus_tag=C9E94_20335
NZ_PYJR01000133.1	Protein Homology	CDS	56636	57925	.	+	0	ID=cds-WP_000554909.1;Parent=gene-C9E94_RS19840;Dbxref=GenBank:WP_000554909.1;Name=WP_000554909.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460450.3;locus_tag=C9E94_RS19840;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_000554909.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	57881	58576	.	-	.	ID=gene-C9E94_RS19845;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=C9E94_RS19845;old_locus_tag=C9E94_20340
NZ_PYJR01000133.1	Protein Homology	CDS	57881	58576	.	-	0	ID=cds-WP_000919206.1;Parent=gene-C9E94_RS19845;Dbxref=GenBank:WP_000919206.1;Name=WP_000919206.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=C9E94_RS19845;product=dethiobiotin synthase;protein_id=WP_000919206.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	58702	59922	.	-	.	ID=gene-C9E94_RS19850;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=C9E94_RS19850;old_locus_tag=C9E94_20345
NZ_PYJR01000133.1	Protein Homology	CDS	58702	59922	.	-	0	ID=cds-WP_000225094.1;Parent=gene-C9E94_RS19850;Dbxref=GenBank:WP_000225094.1;Name=WP_000225094.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460448.1;locus_tag=C9E94_RS19850;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_000225094.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	60050	60949	.	-	.	ID=gene-C9E94_RS19855;Name=C9E94_RS19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19855;old_locus_tag=C9E94_20355
NZ_PYJR01000133.1	Protein Homology	CDS	60050	60949	.	-	0	ID=cds-WP_001019577.1;Parent=gene-C9E94_RS19855;Dbxref=GenBank:WP_001019577.1;Name=WP_001019577.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460447.1;locus_tag=C9E94_RS19855;product=LysR family transcriptional regulator;protein_id=WP_001019577.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	61069	62322	.	+	.	ID=gene-C9E94_RS19860;Name=C9E94_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19860;old_locus_tag=C9E94_20360
NZ_PYJR01000133.1	Protein Homology	CDS	61069	62322	.	+	0	ID=cds-WP_000091796.1;Parent=gene-C9E94_RS19860;Dbxref=GenBank:WP_000091796.1;Name=WP_000091796.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460446.1;locus_tag=C9E94_RS19860;product=MFS transporter;protein_id=WP_000091796.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	62389	62481	.	-	.	ID=gene-C9E94_RS23520;Name=C9E94_RS23520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23520
NZ_PYJR01000133.1	Protein Homology	CDS	62389	62481	.	-	0	ID=cds-WP_001068154.1;Parent=gene-C9E94_RS23520;Dbxref=GenBank:WP_001068154.1;Name=WP_001068154.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=C9E94_RS23520;product=KPN_01571 family protein;protein_id=WP_001068154.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	62717	62968	.	+	.	ID=gene-C9E94_RS19865;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=C9E94_RS19865;old_locus_tag=C9E94_20365
NZ_PYJR01000133.1	Protein Homology	CDS	62717	62968	.	+	0	ID=cds-WP_000756315.1;Parent=gene-C9E94_RS19865;Dbxref=GenBank:WP_000756315.1;Name=WP_000756315.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001698353.1;locus_tag=C9E94_RS19865;product=acid resistance repetitive basic protein Asr;protein_id=WP_000756315.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	63237	64058	.	+	.	ID=gene-C9E94_RS19870;Name=C9E94_RS19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19870;old_locus_tag=C9E94_20370
NZ_PYJR01000133.1	Protein Homology	CDS	63237	64058	.	+	0	ID=cds-WP_000549641.1;Parent=gene-C9E94_RS19870;Dbxref=GenBank:WP_000549641.1;Name=WP_000549641.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460444.1;locus_tag=C9E94_RS19870;product=trypsin-like serine peptidase;protein_id=WP_000549641.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	64093	64422	.	-	.	ID=gene-C9E94_RS19875;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=C9E94_RS19875;old_locus_tag=C9E94_20375
NZ_PYJR01000133.1	Protein Homology	CDS	64093	64422	.	-	0	ID=cds-WP_001183821.1;Parent=gene-C9E94_RS19875;Dbxref=GenBank:WP_001183821.1;Name=WP_001183821.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460443.1;locus_tag=C9E94_RS19875;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_001183821.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	64409	64771	.	-	.	ID=gene-C9E94_RS19880;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=C9E94_RS19880;old_locus_tag=C9E94_20380
NZ_PYJR01000133.1	Protein Homology	CDS	64409	64771	.	-	0	ID=cds-WP_000500278.1;Parent=gene-C9E94_RS19880;Dbxref=GenBank:WP_000500278.1;Name=WP_000500278.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460442.1;locus_tag=C9E94_RS19880;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_000500278.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	64883	65053	.	-	.	ID=gene-C9E94_RS23940;Name=C9E94_RS23940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23940;old_locus_tag=C9E94_20385
NZ_PYJR01000133.1	Protein Homology	CDS	64883	65053	.	-	0	ID=cds-WP_001539987.1;Parent=gene-C9E94_RS23940;Dbxref=GenBank:WP_001539987.1;Name=WP_001539987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334396.1;locus_tag=C9E94_RS23940;product=protein YdgV;protein_id=WP_001539987.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	65189	66223	.	+	.	ID=gene-C9E94_RS19890;Name=C9E94_RS19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19890;old_locus_tag=C9E94_20390
NZ_PYJR01000133.1	Protein Homology	CDS	65189	66223	.	+	0	ID=cds-WP_001118268.1;Parent=gene-C9E94_RS19890;Dbxref=GenBank:WP_001118268.1;Name=WP_001118268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460441.1;locus_tag=C9E94_RS19890;product=AI-2E family transporter;protein_id=WP_001118268.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	66398	67786	.	-	.	ID=gene-C9E94_RS19895;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=C9E94_RS19895;old_locus_tag=C9E94_20395
NZ_PYJR01000133.1	Protein Homology	CDS	66398	67786	.	-	0	ID=cds-WP_000014056.1;Parent=gene-C9E94_RS19895;Dbxref=GenBank:WP_000014056.1;Name=WP_000014056.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=C9E94_RS19895;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_000014056.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	67797	69326	.	-	.	ID=gene-C9E94_RS19900;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=C9E94_RS19900;old_locus_tag=C9E94_20400
NZ_PYJR01000133.1	Protein Homology	CDS	67797	69326	.	-	0	ID=cds-WP_001219362.1;Parent=gene-C9E94_RS19900;Dbxref=GenBank:WP_001219362.1;Name=WP_001219362.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460439.1;locus_tag=C9E94_RS19900;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_001219362.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	69853	70797	.	+	.	ID=gene-C9E94_RS19905;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=C9E94_RS19905;old_locus_tag=C9E94_20405
NZ_PYJR01000133.1	Protein Homology	CDS	69853	70797	.	+	0	ID=cds-WP_000769294.1;Parent=gene-C9E94_RS19905;Dbxref=GenBank:WP_000769294.1;Name=WP_000769294.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460438.1;locus_tag=C9E94_RS19905;product=DUF1471 family protein YdgH;protein_id=WP_000769294.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	71096	72478	.	+	.	ID=gene-C9E94_RS19910;Name=C9E94_RS19910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19910;old_locus_tag=C9E94_20410
NZ_PYJR01000133.1	Protein Homology	CDS	71096	72478	.	+	0	ID=cds-WP_000412353.1;Parent=gene-C9E94_RS19910;Dbxref=GenBank:WP_000412353.1;Name=WP_000412353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460437.1;locus_tag=C9E94_RS19910;product=amino acid permease;protein_id=WP_000412353.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	72540	72875	.	-	.	ID=gene-C9E94_RS19915;Name=C9E94_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19915;old_locus_tag=C9E94_20415
NZ_PYJR01000133.1	Protein Homology	CDS	72540	72875	.	-	0	ID=cds-WP_000524877.1;Parent=gene-C9E94_RS19915;Dbxref=GenBank:WP_000524877.1;Name=WP_000524877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460436.1;locus_tag=C9E94_RS19915;product=GlpM family protein;protein_id=WP_000524877.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	73002	73733	.	+	.	ID=gene-C9E94_RS19920;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=C9E94_RS19920;old_locus_tag=C9E94_20420
NZ_PYJR01000133.1	Protein Homology	CDS	73002	73733	.	+	0	ID=cds-WP_135401195.1;Parent=gene-C9E94_RS19920;Dbxref=GenBank:WP_135401195.1;Name=WP_135401195.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460435.1;locus_tag=C9E94_RS19920;product=two-component system response regulator RstA;protein_id=WP_135401195.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	74213	75364	.	+	.	ID=gene-C9E94_RS19930;Name=ompS2;gbkey=Gene;gene=ompS2;gene_biotype=protein_coding;locus_tag=C9E94_RS19930;old_locus_tag=C9E94_20430
NZ_PYJR01000133.1	Protein Homology	CDS	74213	75364	.	+	0	ID=cds-WP_135401196.1;Parent=gene-C9E94_RS19930;Dbxref=GenBank:WP_135401196.1;Name=WP_135401196.1;gbkey=CDS;gene=ompS2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460434.1;locus_tag=C9E94_RS19930;product=porin OmpS2;protein_id=WP_135401196.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	75517	77223	.	+	.	ID=gene-C9E94_RS19935;Name=C9E94_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19935;old_locus_tag=C9E94_20435
NZ_PYJR01000133.1	Protein Homology	CDS	75517	77223	.	+	0	ID=cds-WP_135401197.1;Parent=gene-C9E94_RS19935;Dbxref=GenBank:WP_135401197.1;Name=WP_135401197.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460433.1;locus_tag=C9E94_RS19935;product=amidohydrolase;protein_id=WP_135401197.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	77334	78635	.	+	.	ID=gene-C9E94_RS19940;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=C9E94_RS19940;old_locus_tag=C9E94_20440
NZ_PYJR01000133.1	Protein Homology	CDS	77334	78635	.	+	0	ID=cds-WP_000732946.1;Parent=gene-C9E94_RS19940;Dbxref=GenBank:WP_000732946.1;Name=WP_000732946.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460432.1;locus_tag=C9E94_RS19940;product=two-component system sensor histidine kinase RstB;protein_id=WP_000732946.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	78711	79640	.	+	.	ID=gene-C9E94_RS19945;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=C9E94_RS19945;old_locus_tag=C9E94_20445
NZ_PYJR01000133.1	Protein Homology	CDS	78711	79640	.	+	0	ID=cds-WP_080185688.1;Parent=gene-C9E94_RS19945;Dbxref=GenBank:WP_080185688.1;Name=WP_080185688.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460431.1;locus_tag=C9E94_RS19945;product=DNA replication terminus site-binding protein;protein_id=WP_080185688.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	79637	81040	.	-	.	ID=gene-C9E94_RS19950;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=C9E94_RS19950;old_locus_tag=C9E94_20450
NZ_PYJR01000133.1	Protein Homology	CDS	79637	81040	.	-	0	ID=cds-WP_000259117.1;Parent=gene-C9E94_RS19950;Dbxref=GenBank:WP_000259117.1;Name=WP_000259117.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460430.1;locus_tag=C9E94_RS19950;product=class II fumarate hydratase;protein_id=WP_000259117.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	81208	82854	.	-	.	ID=gene-C9E94_RS19955;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=C9E94_RS19955;old_locus_tag=C9E94_20455
NZ_PYJR01000133.1	Protein Homology	CDS	81208	82854	.	-	0	ID=cds-WP_000066609.1;Parent=gene-C9E94_RS19955;Dbxref=GenBank:WP_000066609.1;Name=WP_000066609.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=C9E94_RS19955;product=class I fumarate hydratase;protein_id=WP_000066609.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	83054	84229	.	+	.	ID=gene-C9E94_RS19960;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=C9E94_RS19960;old_locus_tag=C9E94_20460
NZ_PYJR01000133.1	Protein Homology	CDS	83054	84229	.	+	0	ID=cds-WP_001170619.1;Parent=gene-C9E94_RS19960;Dbxref=GenBank:WP_001170619.1;Name=WP_001170619.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460428.1;locus_tag=C9E94_RS19960;product=mannose-6-phosphate isomerase;protein_id=WP_001170619.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	84332	85840	.	+	.	ID=gene-C9E94_RS19965;Name=C9E94_RS19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19965;old_locus_tag=C9E94_20465
NZ_PYJR01000133.1	Protein Homology	CDS	84332	85840	.	+	0	ID=cds-WP_135401198.1;Parent=gene-C9E94_RS19965;Dbxref=GenBank:WP_135401198.1;Name=WP_135401198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460427.1;locus_tag=C9E94_RS19965;product=YdgA family protein;protein_id=WP_135401198.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	pseudogene	85959	86179	.	+	.	ID=gene-C9E94_RS19970;Name=C9E94_RS19970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS19970;old_locus_tag=C9E94_20470;partial=true;pseudo=true;start_range=.,85959
NZ_PYJR01000133.1	Protein Homology	CDS	85959	86179	.	+	0	ID=cds-C9E94_RS19970;Parent=gene-C9E94_RS19970;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310356.1;locus_tag=C9E94_RS19970;partial=true;product=glucose PTS transporter subunit EIIB;pseudo=true;start_range=.,85959;transl_table=11
NZ_PYJR01000133.1	RefSeq	pseudogene	86189	86320	.	+	.	ID=gene-C9E94_RS19975;Name=C9E94_RS19975;end_range=86320,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS19975;old_locus_tag=C9E94_20475;partial=true;pseudo=true
NZ_PYJR01000133.1	Protein Homology	CDS	86189	86320	.	+	0	ID=cds-C9E94_RS19975;Parent=gene-C9E94_RS19975;Note=catalyzes the formation of homocysteine and pyruvate from cystathionine%3B also acts a a negative regulator for the mal regulon but interacting with the transcriptional activator MalT%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=86320,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000459379.1;locus_tag=C9E94_RS19975;partial=true;product=transcriptional regulator;pseudo=true;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	86546	87547	.	+	.	ID=gene-C9E94_RS19980;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=C9E94_RS19980;old_locus_tag=C9E94_20480
NZ_PYJR01000133.1	Protein Homology	CDS	86546	87547	.	+	0	ID=cds-WP_000565565.1;Parent=gene-C9E94_RS19980;Dbxref=GenBank:WP_000565565.1;Name=WP_000565565.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460426.1;locus_tag=C9E94_RS19980;product=adenosine deaminase;protein_id=WP_000565565.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	87622	88662	.	-	.	ID=gene-C9E94_RS19985;Name=C9E94_RS19985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19985;old_locus_tag=C9E94_20485
NZ_PYJR01000133.1	Protein Homology	CDS	87622	88662	.	-	0	ID=cds-WP_000998242.1;Parent=gene-C9E94_RS19985;Dbxref=GenBank:WP_000998242.1;Name=WP_000998242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=C9E94_RS19985;product=oxidoreductase;protein_id=WP_000998242.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	88870	88995	.	+	.	ID=gene-C9E94_RS19990;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=C9E94_RS19990;old_locus_tag=C9E94_20490
NZ_PYJR01000133.1	Protein Homology	CDS	88870	88995	.	+	0	ID=cds-WP_001708800.1;Parent=gene-C9E94_RS19990;Dbxref=GenBank:WP_001708800.1;Name=WP_001708800.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=C9E94_RS19990;product=division septum protein Blr;protein_id=WP_001708800.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	89293	89508	.	+	.	ID=gene-C9E94_RS19995;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=C9E94_RS19995;old_locus_tag=C9E94_20495
NZ_PYJR01000133.1	Protein Homology	CDS	89293	89508	.	+	0	ID=cds-WP_000217946.1;Parent=gene-C9E94_RS19995;Dbxref=GenBank:WP_000217946.1;Name=WP_000217946.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460424.3;locus_tag=C9E94_RS19995;product=transcription modulator YdgT;protein_id=WP_000217946.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	89597	90037	.	+	.	ID=gene-C9E94_RS20000;Name=C9E94_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20000;old_locus_tag=C9E94_20500
NZ_PYJR01000133.1	Protein Homology	CDS	89597	90037	.	+	0	ID=cds-WP_000214061.1;Parent=gene-C9E94_RS20000;Dbxref=GenBank:WP_000214061.1;Name=WP_000214061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460423.1;locus_tag=C9E94_RS20000;product=DUF2569 domain-containing protein;protein_id=WP_000214061.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	90114	90695	.	+	.	ID=gene-C9E94_RS20005;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=C9E94_RS20005;old_locus_tag=C9E94_20505
NZ_PYJR01000133.1	Protein Homology	CDS	90114	90695	.	+	0	ID=cds-WP_000133179.1;Parent=gene-C9E94_RS20005;Dbxref=GenBank:WP_000133179.1;Name=WP_000133179.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=C9E94_RS20005;product=electron transport complex subunit RsxA;protein_id=WP_000133179.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	90695	91273	.	+	.	ID=gene-C9E94_RS20010;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=C9E94_RS20010;old_locus_tag=C9E94_20510
NZ_PYJR01000133.1	Protein Homology	CDS	90695	91273	.	+	0	ID=cds-WP_001092597.1;Parent=gene-C9E94_RS20010;Dbxref=GenBank:WP_001092597.1;Name=WP_001092597.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460421.1;locus_tag=C9E94_RS20010;product=electron transport complex subunit RsxB;protein_id=WP_001092597.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	91266	93380	.	+	.	ID=gene-C9E94_RS20015;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=C9E94_RS20015;old_locus_tag=C9E94_20515
NZ_PYJR01000133.1	Protein Homology	CDS	91266	93380	.	+	0	ID=cds-WP_135401199.1;Parent=gene-C9E94_RS20015;Dbxref=GenBank:WP_135401199.1;Name=WP_135401199.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460420.1;locus_tag=C9E94_RS20015;product=electron transport complex subunit RsxC;protein_id=WP_135401199.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	93381	94439	.	+	.	ID=gene-C9E94_RS20020;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=C9E94_RS20020;old_locus_tag=C9E94_20520
NZ_PYJR01000133.1	Protein Homology	CDS	93381	94439	.	+	0	ID=cds-WP_000231963.1;Parent=gene-C9E94_RS20020;Dbxref=GenBank:WP_000231963.1;Name=WP_000231963.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460419.1;locus_tag=C9E94_RS20020;product=electron transport complex subunit RsxD;protein_id=WP_000231963.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	94443	95063	.	+	.	ID=gene-C9E94_RS20025;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=C9E94_RS20025;old_locus_tag=C9E94_20525
NZ_PYJR01000133.1	Protein Homology	CDS	94443	95063	.	+	0	ID=cds-WP_080203987.1;Parent=gene-C9E94_RS20025;Dbxref=GenBank:WP_080203987.1;Name=WP_080203987.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460418.1;locus_tag=C9E94_RS20025;product=electron transport complex subunit RsxG;protein_id=WP_080203987.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	95066	95758	.	+	.	ID=gene-C9E94_RS20030;Name=C9E94_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20030;old_locus_tag=C9E94_20530
NZ_PYJR01000133.1	Protein Homology	CDS	95066	95758	.	+	0	ID=cds-WP_001289628.1;Parent=gene-C9E94_RS20030;Dbxref=GenBank:WP_001289628.1;Name=WP_001289628.1;Ontology_term=GO:0022900;gbkey=CDS;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460417.1;locus_tag=C9E94_RS20030;product=electron transport complex subunit E;protein_id=WP_001289628.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	95758	96393	.	+	.	ID=gene-C9E94_RS20035;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=C9E94_RS20035;old_locus_tag=C9E94_20535
NZ_PYJR01000133.1	Protein Homology	CDS	95758	96393	.	+	0	ID=cds-WP_001030318.1;Parent=gene-C9E94_RS20035;Dbxref=GenBank:WP_001030318.1;Name=WP_001030318.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=C9E94_RS20035;product=endonuclease III;protein_id=WP_001030318.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	96995	98500	.	+	.	ID=gene-C9E94_RS20040;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=C9E94_RS20040;old_locus_tag=C9E94_20540
NZ_PYJR01000133.1	Protein Homology	CDS	96995	98500	.	+	0	ID=cds-WP_000100911.1;Parent=gene-C9E94_RS20040;Dbxref=GenBank:WP_000100911.1;Name=WP_000100911.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460415.1;locus_tag=C9E94_RS20040;product=dipeptide/tripeptide permease DtpA;protein_id=WP_000100911.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	98605	99210	.	+	.	ID=gene-C9E94_RS20045;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=C9E94_RS20045;old_locus_tag=C9E94_20545
NZ_PYJR01000133.1	Protein Homology	CDS	98605	99210	.	+	0	ID=cds-WP_000765727.1;Parent=gene-C9E94_RS20045;Dbxref=GenBank:WP_000765727.1;Name=WP_000765727.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460414.1;locus_tag=C9E94_RS20045;product=glutathione transferase GstA;protein_id=WP_000765727.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	99269	100129	.	-	.	ID=gene-C9E94_RS20050;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=C9E94_RS20050;old_locus_tag=C9E94_20550
NZ_PYJR01000133.1	Protein Homology	CDS	99269	100129	.	-	0	ID=cds-WP_000789736.1;Parent=gene-C9E94_RS20050;Dbxref=GenBank:WP_000789736.1;Name=WP_000789736.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460413.1;locus_tag=C9E94_RS20050;product=pyridoxal kinase PdxY;protein_id=WP_000789736.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	100189	101463	.	-	.	ID=gene-C9E94_RS20055;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=C9E94_RS20055;old_locus_tag=C9E94_20555
NZ_PYJR01000133.1	Protein Homology	CDS	100189	101463	.	-	0	ID=cds-WP_000168626.1;Parent=gene-C9E94_RS20055;Dbxref=GenBank:WP_000168626.1;Name=WP_000168626.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=C9E94_RS20055;product=tyrosine--tRNA ligase;protein_id=WP_000168626.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	101590	102246	.	-	.	ID=gene-C9E94_RS20060;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=C9E94_RS20060;old_locus_tag=C9E94_20560
NZ_PYJR01000133.1	Protein Homology	CDS	101590	102246	.	-	0	ID=cds-WP_001282334.1;Parent=gene-C9E94_RS20060;Dbxref=GenBank:WP_001282334.1;Name=WP_001282334.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=C9E94_RS20060;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282334.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	102305	102634	.	-	.	ID=gene-C9E94_RS20065;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=C9E94_RS20065;old_locus_tag=C9E94_20565
NZ_PYJR01000133.1	Protein Homology	CDS	102305	102634	.	-	0	ID=cds-WP_001132086.1;Parent=gene-C9E94_RS20065;Dbxref=GenBank:WP_001132086.1;Name=WP_001132086.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460410.1;locus_tag=C9E94_RS20065;product=C-type lysozyme inhibitor;protein_id=WP_001132086.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	102722	103843	.	-	.	ID=gene-C9E94_RS20070;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=C9E94_RS20070;old_locus_tag=C9E94_20570
NZ_PYJR01000133.1	Protein Homology	CDS	102722	103843	.	-	0	ID=cds-WP_000835021.1;Parent=gene-C9E94_RS20070;Dbxref=GenBank:WP_000835021.1;Name=WP_000835021.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460409.1;locus_tag=C9E94_RS20070;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_000835021.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	104116	104583	.	+	.	ID=gene-C9E94_RS20075;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=C9E94_RS20075;old_locus_tag=C9E94_20575
NZ_PYJR01000133.1	Protein Homology	CDS	104116	104583	.	+	0	ID=cds-WP_000597179.1;Parent=gene-C9E94_RS20075;Dbxref=GenBank:WP_000597179.1;Name=WP_000597179.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460408.1;locus_tag=C9E94_RS20075;product=outer membrane lipoprotein SlyB;protein_id=WP_000597179.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	104631	105071	.	-	.	ID=gene-C9E94_RS20080;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=C9E94_RS20080;old_locus_tag=C9E94_20580
NZ_PYJR01000133.1	Protein Homology	CDS	104631	105071	.	-	0	ID=cds-WP_000764554.1;Parent=gene-C9E94_RS20080;Dbxref=GenBank:WP_000764554.1;Name=WP_000764554.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=C9E94_RS20080;product=transcriptional regulator SlyA;protein_id=WP_000764554.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	105266	105502	.	+	.	ID=gene-C9E94_RS20085;Name=C9E94_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20085;old_locus_tag=C9E94_20585
NZ_PYJR01000133.1	Protein Homology	CDS	105266	105502	.	+	0	ID=cds-WP_000649755.1;Parent=gene-C9E94_RS20085;Dbxref=GenBank:WP_000649755.1;Name=WP_000649755.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460406.1;locus_tag=C9E94_RS20085;product=DUF1656 domain-containing protein;protein_id=WP_000649755.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	105505	106365	.	+	.	ID=gene-C9E94_RS20090;Name=C9E94_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20090;old_locus_tag=C9E94_20590
NZ_PYJR01000133.1	Protein Homology	CDS	105505	106365	.	+	0	ID=cds-WP_045340932.1;Parent=gene-C9E94_RS20090;Dbxref=GenBank:WP_045340932.1;Name=WP_045340932.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218841.1;locus_tag=C9E94_RS20090;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_045340932.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	106365	108404	.	+	.	ID=gene-C9E94_RS20095;Name=C9E94_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20095;old_locus_tag=C9E94_20595
NZ_PYJR01000133.1	Protein Homology	CDS	106365	108404	.	+	0	ID=cds-WP_080203989.1;Parent=gene-C9E94_RS20095;Dbxref=GenBank:WP_080203989.1;Name=WP_080203989.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460404.1;locus_tag=C9E94_RS20095;product=FUSC family protein;protein_id=WP_080203989.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	108380	108901	.	-	.	ID=gene-C9E94_RS20100;Name=sodC2;gbkey=Gene;gene=sodC2;gene_biotype=protein_coding;gene_synonym=sodCII;locus_tag=C9E94_RS20100;old_locus_tag=C9E94_20600
NZ_PYJR01000133.1	Protein Homology	CDS	108380	108901	.	-	0	ID=cds-WP_000826820.1;Parent=gene-C9E94_RS20100;Dbxref=GenBank:WP_000826820.1;Name=WP_000826820.1;gbkey=CDS;gene=sodC2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460403.1;locus_tag=C9E94_RS20100;product=superoxide dismutase [Cu-Zn] SodC2;protein_id=WP_000826820.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	108981	109877	.	-	.	ID=gene-C9E94_RS20105;Name=C9E94_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20105;old_locus_tag=C9E94_20605
NZ_PYJR01000133.1	Protein Homology	CDS	108981	109877	.	-	0	ID=cds-WP_000250721.1;Parent=gene-C9E94_RS20105;Dbxref=GenBank:WP_000250721.1;Name=WP_000250721.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460402.1;locus_tag=C9E94_RS20105;product=aldo/keto reductase;protein_id=WP_000250721.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	109928	110167	.	-	.	ID=gene-C9E94_RS20110;Name=C9E94_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20110;old_locus_tag=C9E94_20610
NZ_PYJR01000133.1	Protein Homology	CDS	109928	110167	.	-	0	ID=cds-WP_031605363.1;Parent=gene-C9E94_RS20110;Dbxref=GenBank:WP_031605363.1;Name=WP_031605363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460401.1;locus_tag=C9E94_RS20110;product=DUF1289 domain-containing protein;protein_id=WP_031605363.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	110270	110869	.	+	.	ID=gene-C9E94_RS20115;Name=C9E94_RS20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20115;old_locus_tag=C9E94_20615
NZ_PYJR01000133.1	Protein Homology	CDS	110270	110869	.	+	0	ID=cds-WP_001041823.1;Parent=gene-C9E94_RS20115;Dbxref=GenBank:WP_001041823.1;Name=WP_001041823.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460400.1;locus_tag=C9E94_RS20115;product=TetR/AcrR family transcriptional regulator;protein_id=WP_001041823.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	110928	112025	.	+	.	ID=gene-C9E94_RS20120;Name=C9E94_RS20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20120;old_locus_tag=C9E94_20620
NZ_PYJR01000133.1	Protein Homology	CDS	110928	112025	.	+	0	ID=cds-WP_135401200.1;Parent=gene-C9E94_RS20120;Dbxref=GenBank:WP_135401200.1;Name=WP_135401200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460399.1;locus_tag=C9E94_RS20120;product=alkene reductase;protein_id=WP_135401200.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	112094	112501	.	+	.	ID=gene-C9E94_RS20125;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=C9E94_RS20125;old_locus_tag=C9E94_20625
NZ_PYJR01000133.1	Protein Homology	CDS	112094	112501	.	+	0	ID=cds-WP_001237787.1;Parent=gene-C9E94_RS20125;Dbxref=GenBank:WP_001237787.1;Name=WP_001237787.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=C9E94_RS20125;product=lactoylglutathione lyase;protein_id=WP_001237787.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	112602	113249	.	+	.	ID=gene-C9E94_RS20130;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=C9E94_RS20130;old_locus_tag=C9E94_20630
NZ_PYJR01000133.1	Protein Homology	CDS	112602	113249	.	+	0	ID=cds-WP_001282272.1;Parent=gene-C9E94_RS20130;Dbxref=GenBank:WP_001282272.1;Name=WP_001282272.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460397.1;locus_tag=C9E94_RS20130;product=ribonuclease T;protein_id=WP_001282272.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	113327	113674	.	-	.	ID=gene-C9E94_RS20140;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=C9E94_RS20140;old_locus_tag=C9E94_20640
NZ_PYJR01000133.1	Protein Homology	CDS	113327	113674	.	-	0	ID=cds-WP_000108176.1;Parent=gene-C9E94_RS20140;Dbxref=GenBank:WP_000108176.1;Name=WP_000108176.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460396.1;locus_tag=C9E94_RS20140;product=monothiol glutaredoxin 4;protein_id=WP_000108176.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	114009	114830	.	+	.	ID=gene-C9E94_RS20145;Name=C9E94_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20145;old_locus_tag=C9E94_20645
NZ_PYJR01000133.1	Protein Homology	CDS	114009	114830	.	+	0	ID=cds-WP_001520344.1;Parent=gene-C9E94_RS20145;Dbxref=GenBank:WP_001520344.1;Name=WP_001520344.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310391.1;locus_tag=C9E94_RS20145;product=C40 family peptidase;protein_id=WP_001520344.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	114957	115538	.	+	.	ID=gene-C9E94_RS20150;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=C9E94_RS20150;old_locus_tag=C9E94_20650
NZ_PYJR01000133.1	Protein Homology	CDS	114957	115538	.	+	0	ID=cds-WP_000007294.1;Parent=gene-C9E94_RS20150;Dbxref=GenBank:WP_000007294.1;Name=WP_000007294.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460394.1;locus_tag=C9E94_RS20150;product=superoxide dismutase [Fe];protein_id=WP_000007294.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	115621	115710	.	-	.	ID=gene-C9E94_RS20155;Name=cydH;gbkey=Gene;gene=cydH;gene_biotype=protein_coding;gene_synonym=ynhF;locus_tag=C9E94_RS20155;old_locus_tag=C9E94_20655
NZ_PYJR01000133.1	Protein Homology	CDS	115621	115710	.	-	0	ID=cds-WP_000102277.1;Parent=gene-C9E94_RS20155;Dbxref=GenBank:WP_000102277.1;Name=WP_000102277.1;gbkey=CDS;gene=cydH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=C9E94_RS20155;product=cytochrome bd-I oxidase subunit CydH;protein_id=WP_000102277.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	116006	117031	.	+	.	ID=gene-C9E94_RS20160;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=C9E94_RS20160;old_locus_tag=C9E94_20665
NZ_PYJR01000133.1	Protein Homology	CDS	116006	117031	.	+	0	ID=cds-WP_000190992.1;Parent=gene-C9E94_RS20160;Dbxref=GenBank:WP_000190992.1;Name=WP_000190992.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=C9E94_RS20160;product=HTH-type transcriptional repressor PurR;protein_id=WP_000190992.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	117028	117960	.	-	.	ID=gene-C9E94_RS20165;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=C9E94_RS20165;old_locus_tag=C9E94_20670
NZ_PYJR01000133.1	Protein Homology	CDS	117028	117960	.	-	0	ID=cds-WP_000269523.1;Parent=gene-C9E94_RS20165;Dbxref=GenBank:WP_000269523.1;Name=WP_000269523.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=C9E94_RS20165;product=DNA-binding transcriptional activator PunR;protein_id=WP_000269523.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	118073	119278	.	+	.	ID=gene-C9E94_RS20170;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=C9E94_RS20170;old_locus_tag=C9E94_20675
NZ_PYJR01000133.1	Protein Homology	CDS	118073	119278	.	+	0	ID=cds-WP_001182316.1;Parent=gene-C9E94_RS20170;Dbxref=GenBank:WP_001182316.1;Name=WP_001182316.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460391.1;locus_tag=C9E94_RS20170;product=purine nucleoside transporter PunC;protein_id=WP_001182316.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	119568	120716	.	+	.	ID=gene-C9E94_RS20175;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=C9E94_RS20175;old_locus_tag=C9E94_20680
NZ_PYJR01000133.1	Protein Homology	CDS	119568	120716	.	+	0	ID=cds-WP_000098879.1;Parent=gene-C9E94_RS20175;Dbxref=GenBank:WP_000098879.1;Name=WP_000098879.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460390.1;locus_tag=C9E94_RS20175;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_000098879.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	120758	121399	.	-	.	ID=gene-C9E94_RS20180;Name=C9E94_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20180;old_locus_tag=C9E94_20685
NZ_PYJR01000133.1	Protein Homology	CDS	120758	121399	.	-	0	ID=cds-WP_000493973.1;Parent=gene-C9E94_RS20180;Dbxref=GenBank:WP_000493973.1;Name=WP_000493973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460389.1;locus_tag=C9E94_RS20180;product=riboflavin synthase;protein_id=WP_000493973.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	121616	122989	.	+	.	ID=gene-C9E94_RS20185;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=C9E94_RS20185;old_locus_tag=C9E94_20690
NZ_PYJR01000133.1	Protein Homology	CDS	121616	122989	.	+	0	ID=cds-WP_001175072.1;Parent=gene-C9E94_RS20185;Dbxref=GenBank:WP_001175072.1;Name=WP_001175072.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460388.2;locus_tag=C9E94_RS20185;product=multidrug efflux MATE transporter MdtK;protein_id=WP_001175072.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	123141	123217	.	+	.	ID=gene-C9E94_RS20190;Name=C9E94_RS20190;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS20190;old_locus_tag=C9E94_20695
NZ_PYJR01000133.1	tRNAscan-SE	tRNA	123141	123217	.	+	.	ID=rna-C9E94_RS20190;Parent=gene-C9E94_RS20190;anticodon=(pos:123175..123177);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS20190;product=tRNA-Val
NZ_PYJR01000133.1	tRNAscan-SE	exon	123141	123217	.	+	.	ID=exon-C9E94_RS20190-1;Parent=rna-C9E94_RS20190;anticodon=(pos:123175..123177);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS20190;product=tRNA-Val
NZ_PYJR01000133.1	RefSeq	gene	123228	123304	.	+	.	ID=gene-C9E94_RS20195;Name=C9E94_RS20195;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS20195;old_locus_tag=C9E94_20700
NZ_PYJR01000133.1	tRNAscan-SE	tRNA	123228	123304	.	+	.	ID=rna-C9E94_RS20195;Parent=gene-C9E94_RS20195;anticodon=(pos:123262..123264);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS20195;product=tRNA-Val
NZ_PYJR01000133.1	tRNAscan-SE	exon	123228	123304	.	+	.	ID=exon-C9E94_RS20195-1;Parent=rna-C9E94_RS20195;anticodon=(pos:123262..123264);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS20195;product=tRNA-Val
NZ_PYJR01000133.1	RefSeq	gene	123462	124520	.	-	.	ID=gene-C9E94_RS20200;Name=ssaU;gbkey=Gene;gene=ssaU;gene_biotype=protein_coding;locus_tag=C9E94_RS20200;old_locus_tag=C9E94_20705
NZ_PYJR01000133.1	Protein Homology	CDS	123462	124520	.	-	0	ID=cds-WP_001291721.1;Parent=gene-C9E94_RS20200;Dbxref=GenBank:WP_001291721.1;Name=WP_001291721.1;gbkey=CDS;gene=ssaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460387.1;locus_tag=C9E94_RS20200;product=SPI-2 type III secretion system apparatus protein SsaU;protein_id=WP_001291721.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	124517	125296	.	-	.	ID=gene-C9E94_RS20205;Name=ssaT;gbkey=Gene;gene=ssaT;gene_biotype=protein_coding;locus_tag=C9E94_RS20205;old_locus_tag=C9E94_20710
NZ_PYJR01000133.1	Protein Homology	CDS	124517	125296	.	-	0	ID=cds-WP_000068766.1;Parent=gene-C9E94_RS20205;Dbxref=GenBank:WP_000068766.1;Name=WP_000068766.1;gbkey=CDS;gene=ssaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460386.1;locus_tag=C9E94_RS20205;product=SPI-2 type III secretion system apparatus protein SsaT;protein_id=WP_000068766.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	125297	125563	.	-	.	ID=gene-C9E94_RS20210;Name=ssas;gbkey=Gene;gene=ssas;gene_biotype=protein_coding;locus_tag=C9E94_RS20210;old_locus_tag=C9E94_20715
NZ_PYJR01000133.1	Protein Homology	CDS	125297	125563	.	-	0	ID=cds-WP_000999982.1;Parent=gene-C9E94_RS20210;Dbxref=GenBank:WP_000999982.1;Name=WP_000999982.1;gbkey=CDS;gene=ssas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460385.1;locus_tag=C9E94_RS20210;product=SPI-2 type III secretion system apparatus protein SsaS;protein_id=WP_000999982.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	125560	126207	.	-	.	ID=gene-C9E94_RS20215;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;locus_tag=C9E94_RS20215;old_locus_tag=C9E94_20720
NZ_PYJR01000133.1	Protein Homology	CDS	125560	126207	.	-	0	ID=cds-WP_000056367.1;Parent=gene-C9E94_RS20215;Dbxref=GenBank:WP_000056367.1;Name=WP_000056367.1;gbkey=CDS;gene=ssaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460384.1;locus_tag=C9E94_RS20215;product=SPI-2 type III secretion system export apparatus protein SsaR;protein_id=WP_000056367.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	126275	127243	.	-	.	ID=gene-C9E94_RS20220;Name=ssaQ;gbkey=Gene;gene=ssaQ;gene_biotype=protein_coding;locus_tag=C9E94_RS20220;old_locus_tag=C9E94_20725
NZ_PYJR01000133.1	Protein Homology	CDS	126275	127243	.	-	0	ID=cds-WP_000944190.1;Parent=gene-C9E94_RS20220;Dbxref=GenBank:WP_000944190.1;Name=WP_000944190.1;gbkey=CDS;gene=ssaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460383.1;locus_tag=C9E94_RS20220;product=SPI-2 type III secretion system cytoplasmic ring protein SsaQ;protein_id=WP_000944190.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	127224	127598	.	-	.	ID=gene-C9E94_RS20225;Name=ssaP;gbkey=Gene;gene=ssaP;gene_biotype=protein_coding;locus_tag=C9E94_RS20225;old_locus_tag=C9E94_20730
NZ_PYJR01000133.1	Protein Homology	CDS	127224	127598	.	-	0	ID=cds-WP_001223304.1;Parent=gene-C9E94_RS20225;Dbxref=GenBank:WP_001223304.1;Name=WP_001223304.1;gbkey=CDS;gene=ssaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460382.1;locus_tag=C9E94_RS20225;product=SPI-2 type III secretion system apparatus protein SsaP;protein_id=WP_001223304.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	127579	127956	.	-	.	ID=gene-C9E94_RS20230;Name=ssaO;gbkey=Gene;gene=ssaO;gene_biotype=protein_coding;locus_tag=C9E94_RS20230;old_locus_tag=C9E94_20735
NZ_PYJR01000133.1	Protein Homology	CDS	127579	127956	.	-	0	ID=cds-WP_080151357.1;Parent=gene-C9E94_RS20230;Dbxref=GenBank:WP_080151357.1;Name=WP_080151357.1;gbkey=CDS;gene=ssaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460381.1;locus_tag=C9E94_RS20230;product=SPI-2 type III secretion system apparatus protein SsaO;protein_id=WP_080151357.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	127959	129260	.	-	.	ID=gene-C9E94_RS20235;Name=ssaN;gbkey=Gene;gene=ssaN;gene_biotype=protein_coding;locus_tag=C9E94_RS20235;old_locus_tag=C9E94_20740
NZ_PYJR01000133.1	Protein Homology	CDS	127959	129260	.	-	0	ID=cds-WP_135401201.1;Parent=gene-C9E94_RS20235;Dbxref=GenBank:WP_135401201.1;Name=WP_135401201.1;gbkey=CDS;gene=ssaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460380.1;locus_tag=C9E94_RS20235;product=SctN family type III secretion system ATPase SsaN;protein_id=WP_135401201.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	129250	131295	.	-	.	ID=gene-C9E94_RS20240;Name=ssaV;gbkey=Gene;gene=ssaV;gene_biotype=protein_coding;locus_tag=C9E94_RS20240;old_locus_tag=C9E94_20745
NZ_PYJR01000133.1	Protein Homology	CDS	129250	131295	.	-	0	ID=cds-WP_001258221.1;Parent=gene-C9E94_RS20240;Dbxref=GenBank:WP_001258221.1;Name=WP_001258221.1;gbkey=CDS;gene=ssaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460379.1;locus_tag=C9E94_RS20240;product=SPI-2 type III secretion system apparatus protein SsaV;protein_id=WP_001258221.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	131280	131648	.	-	.	ID=gene-C9E94_RS20245;Name=ssaM;gbkey=Gene;gene=ssaM;gene_biotype=protein_coding;locus_tag=C9E94_RS20245;old_locus_tag=C9E94_20750
NZ_PYJR01000133.1	Protein Homology	CDS	131280	131648	.	-	0	ID=cds-WP_000383702.1;Parent=gene-C9E94_RS20245;Dbxref=GenBank:WP_000383702.1;Name=WP_000383702.1;gbkey=CDS;gene=ssaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460378.1;locus_tag=C9E94_RS20245;product=SPI-2 type III secretion system apparatus protein SsaM;protein_id=WP_000383702.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	131706	132722	.	-	.	ID=gene-C9E94_RS20250;Name=ssaL;gbkey=Gene;gene=ssaL;gene_biotype=protein_coding;locus_tag=C9E94_RS20250;old_locus_tag=C9E94_20755
NZ_PYJR01000133.1	Protein Homology	CDS	131706	132722	.	-	0	ID=cds-WP_077248431.1;Parent=gene-C9E94_RS20250;Dbxref=GenBank:WP_077248431.1;Name=WP_077248431.1;gbkey=CDS;gene=ssaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460377.1;locus_tag=C9E94_RS20250;product=SPI-2 type III secretion system apparatus protein SsaL;protein_id=WP_077248431.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	132688	133362	.	-	.	ID=gene-C9E94_RS20255;Name=ssaK;gbkey=Gene;gene=ssaK;gene_biotype=protein_coding;locus_tag=C9E94_RS20255;old_locus_tag=C9E94_20760
NZ_PYJR01000133.1	Protein Homology	CDS	132688	133362	.	-	0	ID=cds-WP_135401202.1;Parent=gene-C9E94_RS20255;Dbxref=GenBank:WP_135401202.1;Name=WP_135401202.1;gbkey=CDS;gene=ssaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460376.1;locus_tag=C9E94_RS20255;product=SPI-2 type III secretion system apparatus protein SsaK;protein_id=WP_135401202.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	133359	133907	.	-	.	ID=gene-C9E94_RS20260;Name=C9E94_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20260;old_locus_tag=C9E94_20765
NZ_PYJR01000133.1	Protein Homology	CDS	133359	133907	.	-	0	ID=cds-WP_001526945.1;Parent=gene-C9E94_RS20260;Dbxref=GenBank:WP_001526945.1;Name=WP_001526945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460375.1;locus_tag=C9E94_RS20260;product=type III secretion system domain-containing protein;protein_id=WP_001526945.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	133925	134674	.	-	.	ID=gene-C9E94_RS20265;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=protein_coding;locus_tag=C9E94_RS20265;old_locus_tag=C9E94_20770
NZ_PYJR01000133.1	Protein Homology	CDS	133925	134674	.	-	0	ID=cds-WP_000862876.1;Parent=gene-C9E94_RS20265;Dbxref=GenBank:WP_000862876.1;Name=WP_000862876.1;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460374.1;locus_tag=C9E94_RS20265;product=SPI-2 type III secretion system apparatus lipoprotein SsaJ;protein_id=WP_000862876.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	134671	134919	.	-	.	ID=gene-C9E94_RS20270;Name=ssaI;gbkey=Gene;gene=ssaI;gene_biotype=protein_coding;locus_tag=C9E94_RS20270;old_locus_tag=C9E94_20775
NZ_PYJR01000133.1	Protein Homology	CDS	134671	134919	.	-	0	ID=cds-WP_001574409.1;Parent=gene-C9E94_RS20270;Dbxref=GenBank:WP_001574409.1;Name=WP_001574409.1;gbkey=CDS;gene=ssaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460373.1;locus_tag=C9E94_RS20270;product=SctI family type III secretion system inner rod subunit SsaI;protein_id=WP_001574409.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	134931	135221	.	-	.	ID=gene-C9E94_RS20275;Name=C9E94_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20275;old_locus_tag=C9E94_20780
NZ_PYJR01000133.1	Protein Homology	CDS	134931	135221	.	-	0	ID=cds-WP_000444713.1;Parent=gene-C9E94_RS20275;Dbxref=GenBank:WP_000444713.1;Name=WP_000444713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531123.1;locus_tag=C9E94_RS20275;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=WP_000444713.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	135199	135414	.	-	.	ID=gene-C9E94_RS20280;Name=ssaG;gbkey=Gene;gene=ssaG;gene_biotype=protein_coding;locus_tag=C9E94_RS20280;old_locus_tag=C9E94_20785
NZ_PYJR01000133.1	Protein Homology	CDS	135199	135414	.	-	0	ID=cds-WP_000350226.1;Parent=gene-C9E94_RS20280;Dbxref=GenBank:WP_000350226.1;Name=WP_000350226.1;gbkey=CDS;gene=ssaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460371.1;locus_tag=C9E94_RS20280;product=type III secretion system needle filament protein SsaG;protein_id=WP_000350226.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	135508	136197	.	-	.	ID=gene-C9E94_RS20285;Name=sseG;gbkey=Gene;gene=sseG;gene_biotype=protein_coding;locus_tag=C9E94_RS20285;old_locus_tag=C9E94_20790
NZ_PYJR01000133.1	Protein Homology	CDS	135508	136197	.	-	0	ID=cds-WP_000805846.1;Parent=gene-C9E94_RS20285;Dbxref=GenBank:WP_000805846.1;Name=WP_000805846.1;Note=SseG%2C from Salmonella pathogenicity island 2%2C is a type III secretion system (T3SS) effector protein.;gbkey=CDS;gene=sseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460370.1;locus_tag=C9E94_RS20285;product=pathogenicity island 2 effector protein SseG;protein_id=WP_000805846.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	136194	136976	.	-	.	ID=gene-C9E94_RS20290;Name=sseF;gbkey=Gene;gene=sseF;gene_biotype=protein_coding;locus_tag=C9E94_RS20290;old_locus_tag=C9E94_20795
NZ_PYJR01000133.1	Protein Homology	CDS	136194	136976	.	-	0	ID=cds-WP_023182098.1;Parent=gene-C9E94_RS20290;Dbxref=GenBank:WP_023182098.1;Name=WP_023182098.1;gbkey=CDS;gene=sseF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460369.1;locus_tag=C9E94_RS20290;product=type III secretion systems effector SseF;protein_id=WP_023182098.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	136992	137426	.	-	.	ID=gene-C9E94_RS20295;Name=sscB;gbkey=Gene;gene=sscB;gene_biotype=protein_coding;locus_tag=C9E94_RS20295;old_locus_tag=C9E94_20800
NZ_PYJR01000133.1	Protein Homology	CDS	136992	137426	.	-	0	ID=cds-WP_000979963.1;Parent=gene-C9E94_RS20295;Dbxref=GenBank:WP_000979963.1;Name=WP_000979963.1;gbkey=CDS;gene=sscB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460368.1;locus_tag=C9E94_RS20295;product=SycD/LcrH family type III secretion system chaperone SscB;protein_id=WP_000979963.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	137478	137894	.	-	.	ID=gene-C9E94_RS20300;Name=sseE;gbkey=Gene;gene=sseE;gene_biotype=protein_coding;locus_tag=C9E94_RS20300;old_locus_tag=C9E94_20805
NZ_PYJR01000133.1	Protein Homology	CDS	137478	137894	.	-	0	ID=cds-WP_000249605.1;Parent=gene-C9E94_RS20300;Dbxref=GenBank:WP_000249605.1;Name=WP_000249605.1;gbkey=CDS;gene=sseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460367.1;locus_tag=C9E94_RS20300;product=LcrR family type III secretion system chaperone SseE;protein_id=WP_000249605.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	137897	138484	.	-	.	ID=gene-C9E94_RS20305;Name=sseD;gbkey=Gene;gene=sseD;gene_biotype=protein_coding;locus_tag=C9E94_RS20305;old_locus_tag=C9E94_20810
NZ_PYJR01000133.1	Protein Homology	CDS	137897	138484	.	-	0	ID=cds-WP_000388323.1;Parent=gene-C9E94_RS20305;Dbxref=GenBank:WP_000388323.1;Name=WP_000388323.1;gbkey=CDS;gene=sseD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460366.1;locus_tag=C9E94_RS20305;product=SPI-2 type III secretion system translocon protein SseD;protein_id=WP_000388323.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	138500	139954	.	-	.	ID=gene-C9E94_RS20310;Name=sseC;gbkey=Gene;gene=sseC;gene_biotype=protein_coding;locus_tag=C9E94_RS20310;old_locus_tag=C9E94_20815
NZ_PYJR01000133.1	Protein Homology	CDS	138500	139954	.	-	0	ID=cds-WP_080203993.1;Parent=gene-C9E94_RS20310;Dbxref=GenBank:WP_080203993.1;Name=WP_080203993.1;gbkey=CDS;gene=sseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460365.1;locus_tag=C9E94_RS20310;product=SPI-2 type III secretion system translocon protein SseC;protein_id=WP_080203993.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	139956	140429	.	-	.	ID=gene-C9E94_RS20315;Name=sscA;gbkey=Gene;gene=sscA;gene_biotype=protein_coding;locus_tag=C9E94_RS20315;old_locus_tag=C9E94_20820
NZ_PYJR01000133.1	Protein Homology	CDS	139956	140429	.	-	0	ID=cds-WP_080203994.1;Parent=gene-C9E94_RS20315;Dbxref=GenBank:WP_080203994.1;Name=WP_080203994.1;gbkey=CDS;gene=sscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460364.1;locus_tag=C9E94_RS20315;product=SycD/LcrH family type III secretion system chaperone SscA;protein_id=WP_080203994.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	140426	141016	.	-	.	ID=gene-C9E94_RS20320;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=C9E94_RS20320;old_locus_tag=C9E94_20825
NZ_PYJR01000133.1	Protein Homology	CDS	140426	141016	.	-	0	ID=cds-WP_000094429.1;Parent=gene-C9E94_RS20320;Dbxref=GenBank:WP_000094429.1;Name=WP_000094429.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460363.1;locus_tag=C9E94_RS20320;product=SPI-2 type III secretion system translocon protein SseB;protein_id=WP_000094429.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	141023	141349	.	-	.	ID=gene-C9E94_RS20325;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=C9E94_RS20325;old_locus_tag=C9E94_20830
NZ_PYJR01000133.1	Protein Homology	CDS	141023	141349	.	-	0	ID=cds-WP_000972855.1;Parent=gene-C9E94_RS20325;Dbxref=GenBank:WP_000972855.1;Name=WP_000972855.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460362.1;locus_tag=C9E94_RS20325;product=SPI-2 type III secretion system chaperone SseA;protein_id=WP_000972855.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	141613	141855	.	-	.	ID=gene-C9E94_RS20330;Name=ssaE;gbkey=Gene;gene=ssaE;gene_biotype=protein_coding;locus_tag=C9E94_RS20330;old_locus_tag=C9E94_20835
NZ_PYJR01000133.1	Protein Homology	CDS	141613	141855	.	-	0	ID=cds-WP_000210204.1;Parent=gene-C9E94_RS20330;Dbxref=GenBank:WP_000210204.1;Name=WP_000210204.1;gbkey=CDS;gene=ssaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460361.1;locus_tag=C9E94_RS20330;product=YscE family type III secretion system co-chaperone SsaE;protein_id=WP_000210204.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	141863	143074	.	-	.	ID=gene-C9E94_RS20335;Name=ssaD;gbkey=Gene;gene=ssaD;gene_biotype=protein_coding;locus_tag=C9E94_RS20335;old_locus_tag=C9E94_20840
NZ_PYJR01000133.1	Protein Homology	CDS	141863	143074	.	-	0	ID=cds-WP_000323784.1;Parent=gene-C9E94_RS20335;Dbxref=GenBank:WP_000323784.1;Name=WP_000323784.1;gbkey=CDS;gene=ssaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460360.1;locus_tag=C9E94_RS20335;product=SctD family type III secretion system inner membrane ring subunit SsaD;protein_id=WP_000323784.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	143055	144548	.	-	.	ID=gene-C9E94_RS20340;Name=spiA;gbkey=Gene;gene=spiA;gene_biotype=protein_coding;locus_tag=C9E94_RS20340;old_locus_tag=C9E94_20845
NZ_PYJR01000133.1	Protein Homology	CDS	143055	144548	.	-	0	ID=cds-WP_000261283.1;Parent=gene-C9E94_RS20340;Dbxref=GenBank:WP_000261283.1;Name=WP_000261283.1;gbkey=CDS;gene=spiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460359.1;locus_tag=C9E94_RS20340;product=SPI-2 type III secretion system protein SpiA;protein_id=WP_000261283.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	144550	144951	.	-	.	ID=gene-C9E94_RS20345;Name=spiC;gbkey=Gene;gene=spiC;gene_biotype=protein_coding;locus_tag=C9E94_RS20345;old_locus_tag=C9E94_20850
NZ_PYJR01000133.1	Protein Homology	CDS	144550	144951	.	-	0	ID=cds-WP_001738217.1;Parent=gene-C9E94_RS20345;Dbxref=GenBank:WP_001738217.1;Name=WP_001738217.1;gbkey=CDS;gene=spiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460358.1;locus_tag=C9E94_RS20345;product=SPI-2 type III secretion system protein SpiC;protein_id=WP_001738217.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	145352	148114	.	+	.	ID=gene-C9E94_RS20350;Name=C9E94_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20350;old_locus_tag=C9E94_20855
NZ_PYJR01000133.1	Protein Homology	CDS	145352	148114	.	+	0	ID=cds-WP_080203845.1;Parent=gene-C9E94_RS20350;Dbxref=GenBank:WP_080203845.1;Name=WP_080203845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460357.1;locus_tag=C9E94_RS20350;product=two component system sensor kinase;protein_id=WP_080203845.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	148145	148783	.	+	.	ID=gene-C9E94_RS20355;Name=C9E94_RS20355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20355;old_locus_tag=C9E94_20860
NZ_PYJR01000133.1	Protein Homology	CDS	148145	148783	.	+	0	ID=cds-WP_000666335.1;Parent=gene-C9E94_RS20355;Dbxref=GenBank:WP_000666335.1;Name=WP_000666335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460356.1;locus_tag=C9E94_RS20355;product=two component system response regulator;protein_id=WP_000666335.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	148962	149690	.	+	.	ID=gene-C9E94_RS20360;Name=C9E94_RS20360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20360;old_locus_tag=C9E94_20865
NZ_PYJR01000133.1	Protein Homology	CDS	148962	149690	.	+	0	ID=cds-WP_000122321.1;Parent=gene-C9E94_RS20360;Dbxref=GenBank:WP_000122321.1;Name=WP_000122321.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460355.1;locus_tag=C9E94_RS20360;product=MerR family transcriptional regulator;protein_id=WP_000122321.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	149863	150822	.	+	.	ID=gene-C9E94_RS20365;Name=mlrB;gbkey=Gene;gene=mlrB;gene_biotype=protein_coding;locus_tag=C9E94_RS20365;old_locus_tag=C9E94_20870
NZ_PYJR01000133.1	Protein Homology	CDS	149863	150822	.	+	0	ID=cds-WP_001060729.1;Parent=gene-C9E94_RS20365;Dbxref=GenBank:WP_001060729.1;Name=WP_001060729.1;gbkey=CDS;gene=mlrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460354.1;locus_tag=C9E94_RS20365;product=transcriptional regulator MlrB;protein_id=WP_001060729.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	150944	151156	.	-	.	ID=gene-C9E94_RS20370;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=C9E94_RS20370;old_locus_tag=C9E94_20875
NZ_PYJR01000133.1	Protein Homology	CDS	150944	151156	.	-	0	ID=cds-WP_000165779.1;Parent=gene-C9E94_RS20370;Dbxref=GenBank:WP_000165779.1;Name=WP_000165779.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460353.1;locus_tag=C9E94_RS20370;product=fumarate hydratase FumD;protein_id=WP_000165779.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	151254	151874	.	-	.	ID=gene-C9E94_RS20375;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=C9E94_RS20375;old_locus_tag=C9E94_20880
NZ_PYJR01000133.1	Protein Homology	CDS	151254	151874	.	-	0	ID=cds-WP_000190927.1;Parent=gene-C9E94_RS20375;Dbxref=GenBank:WP_000190927.1;Name=WP_000190927.1;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460352.3;locus_tag=C9E94_RS20375;product=tetrathionate respiration response regulator TtrR;protein_id=WP_000190927.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	151849	153627	.	-	.	ID=gene-C9E94_RS20380;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=C9E94_RS20380;old_locus_tag=C9E94_20885
NZ_PYJR01000133.1	Protein Homology	CDS	151849	153627	.	-	0	ID=cds-WP_001214407.1;Parent=gene-C9E94_RS20380;Dbxref=GenBank:WP_001214407.1;Name=WP_001214407.1;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=C9E94_RS20380;product=tetrathionate respiration histidine kinase TtrS;protein_id=WP_001214407.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	153809	154543	.	+	.	ID=gene-C9E94_RS20385;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=protein_coding;locus_tag=C9E94_RS20385;old_locus_tag=C9E94_20890
NZ_PYJR01000133.1	Protein Homology	CDS	153809	154543	.	+	0	ID=cds-WP_001523928.1;Parent=gene-C9E94_RS20385;Dbxref=GenBank:WP_001523928.1;Name=WP_001523928.1;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518945.1;locus_tag=C9E94_RS20385;product=tetrathionate reductase subunit TtrB;protein_id=WP_001523928.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	154544	155566	.	+	.	ID=gene-C9E94_RS20390;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=protein_coding;locus_tag=C9E94_RS20390;old_locus_tag=C9E94_20895
NZ_PYJR01000133.1	Protein Homology	CDS	154544	155566	.	+	0	ID=cds-WP_080169666.1;Parent=gene-C9E94_RS20390;Dbxref=GenBank:WP_080169666.1;Name=WP_080169666.1;gbkey=CDS;gene=ttrC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004120249.1;locus_tag=C9E94_RS20390;product=tetrathionate reductase subunit TtrC;protein_id=WP_080169666.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	155559	158621	.	+	.	ID=gene-C9E94_RS20395;Name=ttrA;gbkey=Gene;gene=ttrA;gene_biotype=protein_coding;locus_tag=C9E94_RS20395;old_locus_tag=C9E94_20900
NZ_PYJR01000133.1	Protein Homology	CDS	155559	158621	.	+	0	ID=cds-WP_080169665.1;Parent=gene-C9E94_RS20395;Dbxref=GenBank:WP_080169665.1;Name=WP_080169665.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;gene=ttrA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460348.1;locus_tag=C9E94_RS20395;product=tetrathionate reductase subunit TtrA;protein_id=WP_080169665.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	158944	160170	.	+	.	ID=gene-C9E94_RS20400;Name=C9E94_RS20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20400;old_locus_tag=C9E94_20905
NZ_PYJR01000133.1	Protein Homology	CDS	158944	160170	.	+	0	ID=cds-WP_135401203.1;Parent=gene-C9E94_RS20400;Dbxref=GenBank:WP_135401203.1;Name=WP_135401203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460347.1;locus_tag=C9E94_RS20400;product=PfkB family carbohydrate kinase;protein_id=WP_135401203.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	160182	160919	.	+	.	ID=gene-C9E94_RS20405;Name=C9E94_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20405;old_locus_tag=C9E94_20910
NZ_PYJR01000133.1	Protein Homology	CDS	160182	160919	.	+	0	ID=cds-WP_000697195.1;Parent=gene-C9E94_RS20405;Dbxref=GenBank:WP_000697195.1;Name=WP_000697195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460346.1;locus_tag=C9E94_RS20405;product=glutamine amidotransferase;protein_id=WP_000697195.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	160978	161871	.	+	.	ID=gene-C9E94_RS20410;Name=C9E94_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20410;old_locus_tag=C9E94_20915
NZ_PYJR01000133.1	Protein Homology	CDS	160978	161871	.	+	0	ID=cds-WP_042947405.1;Parent=gene-C9E94_RS20410;Dbxref=GenBank:WP_042947405.1;Name=WP_042947405.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460345.1;locus_tag=C9E94_RS20410;product=proline iminopeptidase-family hydrolase;protein_id=WP_042947405.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	161893	163236	.	+	.	ID=gene-C9E94_RS20415;Name=C9E94_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20415;old_locus_tag=C9E94_20920
NZ_PYJR01000133.1	Protein Homology	CDS	161893	163236	.	+	0	ID=cds-WP_000756083.1;Parent=gene-C9E94_RS20415;Dbxref=GenBank:WP_000756083.1;Name=WP_000756083.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460344.1;locus_tag=C9E94_RS20415;product=APC family permease;protein_id=WP_000756083.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	163400	163630	.	+	.	ID=gene-C9E94_RS23945;Name=ynhH;gbkey=Gene;gene=ynhH;gene_biotype=protein_coding;locus_tag=C9E94_RS23945
NZ_PYJR01000133.1	Protein Homology	CDS	163400	163630	.	+	0	ID=cds-WP_418143684.1;Parent=gene-C9E94_RS23945;Dbxref=GenBank:WP_418143684.1;Name=WP_418143684.1;gbkey=CDS;gene=ynhH;inference=COORDINATES: protein motif:HMM:NF049534.1;locus_tag=C9E94_RS23945;product=protein YnhH;protein_id=WP_418143684.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	163638	165050	.	+	.	ID=gene-C9E94_RS20420;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=C9E94_RS20420;old_locus_tag=C9E94_20930
NZ_PYJR01000133.1	Protein Homology	CDS	163638	165050	.	+	0	ID=cds-WP_000751447.1;Parent=gene-C9E94_RS20420;Dbxref=GenBank:WP_000751447.1;Name=WP_000751447.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=C9E94_RS20420;product=pyruvate kinase PykF;protein_id=WP_000751447.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	165361	165597	.	+	.	ID=gene-C9E94_RS20425;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=C9E94_RS20425;old_locus_tag=C9E94_20935
NZ_PYJR01000133.1	Protein Homology	CDS	165361	165597	.	+	0	ID=cds-WP_001082307.1;Parent=gene-C9E94_RS20425;Dbxref=GenBank:WP_001082307.1;Name=WP_001082307.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460342.1;locus_tag=C9E94_RS20425;product=murein lipoprotein Lpp;protein_id=WP_001082307.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	165680	165922	.	+	.	ID=gene-C9E94_RS20430;Name=C9E94_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20430;old_locus_tag=C9E94_20940
NZ_PYJR01000133.1	Protein Homology	CDS	165680	165922	.	+	0	ID=cds-WP_023261933.1;Parent=gene-C9E94_RS20430;Dbxref=GenBank:WP_023261933.1;Name=WP_023261933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082333.1;locus_tag=C9E94_RS20430;product=major outer membrane lipoprotein;protein_id=WP_023261933.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	166003	166242	.	+	.	ID=gene-C9E94_RS20435;Name=C9E94_RS20435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20435;old_locus_tag=C9E94_20945
NZ_PYJR01000133.1	Protein Homology	CDS	166003	166242	.	+	0	ID=cds-WP_000198781.1;Parent=gene-C9E94_RS20435;Dbxref=GenBank:WP_000198781.1;Name=WP_000198781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460341.1;locus_tag=C9E94_RS20435;product=major outer membrane lipoprotein;protein_id=WP_000198781.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	166308	167309	.	-	.	ID=gene-C9E94_RS20440;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;locus_tag=C9E94_RS20440;old_locus_tag=C9E94_20950
NZ_PYJR01000133.1	Protein Homology	CDS	166308	167309	.	-	0	ID=cds-WP_000817060.1;Parent=gene-C9E94_RS20440;Dbxref=GenBank:WP_000817060.1;Name=WP_000817060.1;Ontology_term=GO:0009252,GO:0018104,GO:0016757,GO:0071972;gbkey=CDS;gene=ldtE;go_function=glycosyltransferase activity|0016757||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460340.1;locus_tag=C9E94_RS20440;product=L%2CD-transpeptidase LdtE;protein_id=WP_000817060.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	167464	167880	.	-	.	ID=gene-C9E94_RS20445;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=C9E94_RS20445;old_locus_tag=C9E94_20955
NZ_PYJR01000133.1	Protein Homology	CDS	167464	167880	.	-	0	ID=cds-WP_000729468.1;Parent=gene-C9E94_RS20445;Dbxref=GenBank:WP_000729468.1;Name=WP_000729468.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460339.1;locus_tag=C9E94_RS20445;product=cysteine desulfuration protein SufE;protein_id=WP_000729468.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	167893	169113	.	-	.	ID=gene-C9E94_RS20450;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=C9E94_RS20450;old_locus_tag=C9E94_20960
NZ_PYJR01000133.1	Protein Homology	CDS	167893	169113	.	-	0	ID=cds-WP_000143859.1;Parent=gene-C9E94_RS20450;Dbxref=GenBank:WP_000143859.1;Name=WP_000143859.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460338.1;locus_tag=C9E94_RS20450;product=cysteine desulfurase SufS;protein_id=WP_000143859.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	169110	170381	.	-	.	ID=gene-C9E94_RS20455;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=C9E94_RS20455;old_locus_tag=C9E94_20965
NZ_PYJR01000133.1	Protein Homology	CDS	169110	170381	.	-	0	ID=cds-WP_135401204.1;Parent=gene-C9E94_RS20455;Dbxref=GenBank:WP_135401204.1;Name=WP_135401204.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460337.1;locus_tag=C9E94_RS20455;product=Fe-S cluster assembly protein SufD;protein_id=WP_135401204.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	170356	171102	.	-	.	ID=gene-C9E94_RS20460;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=C9E94_RS20460;old_locus_tag=C9E94_20970
NZ_PYJR01000133.1	Protein Homology	CDS	170356	171102	.	-	0	ID=cds-WP_000948902.1;Parent=gene-C9E94_RS20460;Dbxref=GenBank:WP_000948902.1;Name=WP_000948902.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=C9E94_RS20460;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_000948902.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	171119	172606	.	-	.	ID=gene-C9E94_RS20465;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=C9E94_RS20465;old_locus_tag=C9E94_20975
NZ_PYJR01000133.1	Protein Homology	CDS	171119	172606	.	-	0	ID=cds-WP_000089383.1;Parent=gene-C9E94_RS20465;Dbxref=GenBank:WP_000089383.1;Name=WP_000089383.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=C9E94_RS20465;product=Fe-S cluster assembly protein SufB;protein_id=WP_000089383.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	172615	172983	.	-	.	ID=gene-C9E94_RS20470;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=C9E94_RS20470;old_locus_tag=C9E94_20980
NZ_PYJR01000133.1	Protein Homology	CDS	172615	172983	.	-	0	ID=cds-WP_000418973.1;Parent=gene-C9E94_RS20470;Dbxref=GenBank:WP_000418973.1;Name=WP_000418973.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460334.1;locus_tag=C9E94_RS20470;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_000418973.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	173410	174756	.	+	.	ID=gene-C9E94_RS20475;Name=C9E94_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20475;old_locus_tag=C9E94_20985
NZ_PYJR01000133.1	Protein Homology	CDS	173410	174756	.	+	0	ID=cds-WP_000261861.1;Parent=gene-C9E94_RS20475;Dbxref=GenBank:WP_000261861.1;Name=WP_000261861.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460333.1;locus_tag=C9E94_RS20475;product=L-cystine transporter;protein_id=WP_000261861.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	175044	175232	.	-	.	ID=gene-C9E94_RS20480;Name=C9E94_RS20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20480;old_locus_tag=C9E94_20990
NZ_PYJR01000133.1	Protein Homology	CDS	175044	175232	.	-	0	ID=cds-WP_001537749.1;Parent=gene-C9E94_RS20480;Dbxref=GenBank:WP_001537749.1;Name=WP_001537749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=C9E94_RS20480;product=YdiH family protein;protein_id=WP_001537749.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	175331	175741	.	-	.	ID=gene-C9E94_RS20485;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=C9E94_RS20485;old_locus_tag=C9E94_20995
NZ_PYJR01000133.1	Protein Homology	CDS	175331	175741	.	-	0	ID=cds-WP_000637930.1;Parent=gene-C9E94_RS20485;Dbxref=GenBank:WP_000637930.1;Name=WP_000637930.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460331.1;locus_tag=C9E94_RS20485;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637930.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	175738	178794	.	-	.	ID=gene-C9E94_RS20490;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=C9E94_RS20490;old_locus_tag=C9E94_21000
NZ_PYJR01000133.1	Protein Homology	CDS	175738	178794	.	-	0	ID=cds-WP_000612907.1;Parent=gene-C9E94_RS20490;Dbxref=GenBank:WP_000612907.1;Name=WP_000612907.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase (NAD+) activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460330.1;locus_tag=C9E94_RS20490;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_000612907.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	179059	180177	.	+	.	ID=gene-C9E94_RS20495;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=C9E94_RS20495;old_locus_tag=C9E94_21005
NZ_PYJR01000133.1	Protein Homology	CDS	179059	180177	.	+	0	ID=cds-WP_000248615.1;Parent=gene-C9E94_RS20495;Dbxref=GenBank:WP_000248615.1;Name=WP_000248615.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460329.1;locus_tag=C9E94_RS20495;product=AI-2E family transporter YdiK;protein_id=WP_000248615.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	180360	180467	.	+	.	ID=gene-C9E94_RS20500;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=C9E94_RS20500;old_locus_tag=C9E94_21010
NZ_PYJR01000133.1	cmsearch	antisense_RNA	180360	180467	.	+	.	ID=rna-C9E94_RS20500;Parent=gene-C9E94_RS20500;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS20500;product=antisense sRNA RprA
NZ_PYJR01000133.1	cmsearch	exon	180360	180467	.	+	.	ID=exon-C9E94_RS20500-1;Parent=rna-C9E94_RS20500;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS20500;product=antisense sRNA RprA
NZ_PYJR01000133.1	RefSeq	gene	180636	180995	.	+	.	ID=gene-C9E94_RS20505;Name=C9E94_RS20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20505;old_locus_tag=C9E94_21015
NZ_PYJR01000133.1	Protein Homology	CDS	180636	180995	.	+	0	ID=cds-WP_000980455.1;Parent=gene-C9E94_RS20505;Dbxref=GenBank:WP_000980455.1;Name=WP_000980455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460328.1;locus_tag=C9E94_RS20505;product=YdiL family protein;protein_id=WP_000980455.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	181136	182347	.	+	.	ID=gene-C9E94_RS20510;Name=C9E94_RS20510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20510;old_locus_tag=C9E94_21020
NZ_PYJR01000133.1	Protein Homology	CDS	181136	182347	.	+	0	ID=cds-WP_000797669.1;Parent=gene-C9E94_RS20510;Dbxref=GenBank:WP_000797669.1;Name=WP_000797669.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460327.1;locus_tag=C9E94_RS20510;product=MFS transporter;protein_id=WP_000797669.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	182711	183946	.	+	.	ID=gene-C9E94_RS20515;Name=C9E94_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20515;old_locus_tag=C9E94_21025
NZ_PYJR01000133.1	Protein Homology	CDS	182711	183946	.	+	0	ID=cds-WP_135401205.1;Parent=gene-C9E94_RS20515;Dbxref=GenBank:WP_135401205.1;Name=WP_135401205.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460326.1;locus_tag=C9E94_RS20515;product=MFS transporter;protein_id=WP_135401205.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	184013	184879	.	+	.	ID=gene-C9E94_RS20520;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=C9E94_RS20520;old_locus_tag=C9E94_21030
NZ_PYJR01000133.1	Protein Homology	CDS	184013	184879	.	+	0	ID=cds-WP_000383488.1;Parent=gene-C9E94_RS20520;Dbxref=GenBank:WP_000383488.1;Name=WP_000383488.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460325.1;locus_tag=C9E94_RS20520;product=quinate/shikimate dehydrogenase;protein_id=WP_000383488.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	184924	185682	.	+	.	ID=gene-C9E94_RS20525;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=C9E94_RS20525;old_locus_tag=C9E94_21035
NZ_PYJR01000133.1	Protein Homology	CDS	184924	185682	.	+	0	ID=cds-WP_000860221.1;Parent=gene-C9E94_RS20525;Dbxref=GenBank:WP_000860221.1;Name=WP_000860221.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460324.1;locus_tag=C9E94_RS20525;product=type I 3-dehydroquinate dehydratase;protein_id=WP_000860221.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	185836	187431	.	+	.	ID=gene-C9E94_RS20530;Name=C9E94_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20530;old_locus_tag=C9E94_21040
NZ_PYJR01000133.1	Protein Homology	CDS	185836	187431	.	+	0	ID=cds-WP_000700599.1;Parent=gene-C9E94_RS20530;Dbxref=GenBank:WP_000700599.1;Name=WP_000700599.1;Ontology_term=GO:0008410,GO:0016782;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=C9E94_RS20530;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_000700599.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	187445	188596	.	+	.	ID=gene-C9E94_RS20535;Name=C9E94_RS20535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20535;old_locus_tag=C9E94_21045
NZ_PYJR01000133.1	Protein Homology	CDS	187445	188596	.	+	0	ID=cds-WP_000347819.1;Parent=gene-C9E94_RS20535;Dbxref=GenBank:WP_000347819.1;Name=WP_000347819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460322.1;locus_tag=C9E94_RS20535;product=acyl-CoA dehydrogenase;protein_id=WP_000347819.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	188672	189562	.	-	.	ID=gene-C9E94_RS20540;Name=C9E94_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20540;old_locus_tag=C9E94_21050
NZ_PYJR01000133.1	Protein Homology	CDS	188672	189562	.	-	0	ID=cds-WP_000284832.1;Parent=gene-C9E94_RS20540;Dbxref=GenBank:WP_000284832.1;Name=WP_000284832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460321.1;locus_tag=C9E94_RS20540;product=AraC family transcriptional regulator;protein_id=WP_000284832.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	190025	190789	.	+	.	ID=gene-C9E94_RS20545;Name=C9E94_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20545;old_locus_tag=C9E94_21055
NZ_PYJR01000133.1	Protein Homology	CDS	190025	190789	.	+	0	ID=cds-WP_000692096.1;Parent=gene-C9E94_RS20545;Dbxref=GenBank:WP_000692096.1;Name=WP_000692096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460320.1;locus_tag=C9E94_RS20545;product=electron transfer flavoprotein;protein_id=WP_000692096.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	190811	191746	.	+	.	ID=gene-C9E94_RS20550;Name=C9E94_RS20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20550;old_locus_tag=C9E94_21060
NZ_PYJR01000133.1	Protein Homology	CDS	190811	191746	.	+	0	ID=cds-WP_001015883.1;Parent=gene-C9E94_RS20550;Dbxref=GenBank:WP_001015883.1;Name=WP_001015883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460319.1;locus_tag=C9E94_RS20550;product=electron transfer flavoprotein subunit alpha;protein_id=WP_001015883.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	191803	193089	.	+	.	ID=gene-C9E94_RS20555;Name=C9E94_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20555;old_locus_tag=C9E94_21065
NZ_PYJR01000133.1	Protein Homology	CDS	191803	193089	.	+	0	ID=cds-WP_001278565.1;Parent=gene-C9E94_RS20555;Dbxref=GenBank:WP_001278565.1;Name=WP_001278565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460318.1;locus_tag=C9E94_RS20555;product=FAD-dependent oxidoreductase;protein_id=WP_001278565.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	193086	193379	.	+	.	ID=gene-C9E94_RS20560;Name=C9E94_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20560;old_locus_tag=C9E94_21070
NZ_PYJR01000133.1	Protein Homology	CDS	193086	193379	.	+	0	ID=cds-WP_000093359.1;Parent=gene-C9E94_RS20560;Dbxref=GenBank:WP_000093359.1;Name=WP_000093359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460317.1;locus_tag=C9E94_RS20560;product=ferredoxin family protein;protein_id=WP_000093359.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	193617	195257	.	+	.	ID=gene-C9E94_RS20565;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=C9E94_RS20565;old_locus_tag=C9E94_21075
NZ_PYJR01000133.1	Protein Homology	CDS	193617	195257	.	+	0	ID=cds-WP_000117500.1;Parent=gene-C9E94_RS20565;Dbxref=GenBank:WP_000117500.1;Name=WP_000117500.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460316.1;locus_tag=C9E94_RS20565;product=medium-chain fatty-acid--CoA ligase;protein_id=WP_000117500.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	195299	197677	.	-	.	ID=gene-C9E94_RS20570;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=C9E94_RS20570;old_locus_tag=C9E94_21080
NZ_PYJR01000133.1	Protein Homology	CDS	195299	197677	.	-	0	ID=cds-WP_135401206.1;Parent=gene-C9E94_RS20570;Dbxref=GenBank:WP_135401206.1;Name=WP_135401206.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460315.1;locus_tag=C9E94_RS20570;product=phosphoenolpyruvate synthase;protein_id=WP_135401206.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	198014	198847	.	+	.	ID=gene-C9E94_RS20575;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=C9E94_RS20575;old_locus_tag=C9E94_21085
NZ_PYJR01000133.1	Protein Homology	CDS	198014	198847	.	+	0	ID=cds-WP_000370992.1;Parent=gene-C9E94_RS20575;Dbxref=GenBank:WP_000370992.1;Name=WP_000370992.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460314.1;locus_tag=C9E94_RS20575;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_000370992.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	199003	200049	.	+	.	ID=gene-C9E94_RS20580;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=C9E94_RS20580;old_locus_tag=C9E94_21090
NZ_PYJR01000133.1	Protein Homology	CDS	199003	200049	.	+	0	ID=cds-WP_135401207.1;Parent=gene-C9E94_RS20580;Dbxref=GenBank:WP_135401207.1;Name=WP_135401207.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460313.1;locus_tag=C9E94_RS20580;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_135401207.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	200206	200397	.	+	.	ID=gene-C9E94_RS20585;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=C9E94_RS20585;old_locus_tag=C9E94_21095
NZ_PYJR01000133.1	Protein Homology	CDS	200206	200397	.	+	0	ID=cds-WP_000089118.1;Parent=gene-C9E94_RS20585;Dbxref=GenBank:WP_000089118.1;Name=WP_000089118.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460312.1;locus_tag=C9E94_RS20585;product=hemin uptake protein HemP;protein_id=WP_000089118.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	200432	201874	.	-	.	ID=gene-C9E94_RS20590;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=C9E94_RS20590;old_locus_tag=C9E94_21100
NZ_PYJR01000133.1	Protein Homology	CDS	200432	201874	.	-	0	ID=cds-WP_080193935.1;Parent=gene-C9E94_RS20590;Dbxref=GenBank:WP_080193935.1;Name=WP_080193935.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460311.1;locus_tag=C9E94_RS20590;product=protein adenylyltransferase SelO;protein_id=WP_080193935.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	201936	202649	.	-	.	ID=gene-C9E94_RS20595;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=C9E94_RS20595;old_locus_tag=C9E94_21105
NZ_PYJR01000133.1	Protein Homology	CDS	201936	202649	.	-	0	ID=cds-WP_020898711.1;Parent=gene-C9E94_RS20595;Dbxref=GenBank:WP_020898711.1;Name=WP_020898711.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460310.1;locus_tag=C9E94_RS20595;product=anti-FlhDC factor YdiV;protein_id=WP_020898711.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	202963	203427	.	-	.	ID=gene-C9E94_RS20600;Name=C9E94_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20600;old_locus_tag=C9E94_21110
NZ_PYJR01000133.1	Protein Homology	CDS	202963	203427	.	-	0	ID=cds-WP_001213256.1;Parent=gene-C9E94_RS20600;Dbxref=GenBank:WP_001213256.1;Name=WP_001213256.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460309.1;locus_tag=C9E94_RS20600;product=C40 family peptidase;protein_id=WP_001213256.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	203504	204253	.	-	.	ID=gene-C9E94_RS20605;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=C9E94_RS20605;old_locus_tag=C9E94_21115
NZ_PYJR01000133.1	Protein Homology	CDS	203504	204253	.	-	0	ID=cds-WP_135401208.1;Parent=gene-C9E94_RS20605;Dbxref=GenBank:WP_135401208.1;Name=WP_135401208.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460308.1;locus_tag=C9E94_RS20605;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_135401208.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	204253	204804	.	-	.	ID=gene-C9E94_RS20610;Name=C9E94_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20610;old_locus_tag=C9E94_21120
NZ_PYJR01000133.1	Protein Homology	CDS	204253	204804	.	-	0	ID=cds-WP_001181565.1;Parent=gene-C9E94_RS20610;Dbxref=GenBank:WP_001181565.1;Name=WP_001181565.1;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460307.1;locus_tag=C9E94_RS20610;product=glutathione peroxidase;protein_id=WP_001181565.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	204896	205876	.	-	.	ID=gene-C9E94_RS20615;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=C9E94_RS20615;old_locus_tag=C9E94_21125
NZ_PYJR01000133.1	Protein Homology	CDS	204896	205876	.	-	0	ID=cds-WP_000954984.1;Parent=gene-C9E94_RS20615;Dbxref=GenBank:WP_000954984.1;Name=WP_000954984.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460306.1;locus_tag=C9E94_RS20615;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_000954984.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	206079	206378	.	-	.	ID=gene-C9E94_RS20620;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=C9E94_RS20620;old_locus_tag=C9E94_21130
NZ_PYJR01000133.1	Protein Homology	CDS	206079	206378	.	-	0	ID=cds-WP_001229266.1;Parent=gene-C9E94_RS20620;Dbxref=GenBank:WP_001229266.1;Name=WP_001229266.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=C9E94_RS20620;product=integration host factor subunit alpha;protein_id=WP_001229266.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	206383	208770	.	-	.	ID=gene-C9E94_RS20625;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=C9E94_RS20625;old_locus_tag=C9E94_21135
NZ_PYJR01000133.1	Protein Homology	CDS	206383	208770	.	-	0	ID=cds-WP_135401209.1;Parent=gene-C9E94_RS20625;Dbxref=GenBank:WP_135401209.1;Name=WP_135401209.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=C9E94_RS20625;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_135401209.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	208786	209769	.	-	.	ID=gene-C9E94_RS20630;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=C9E94_RS20630;old_locus_tag=C9E94_21140
NZ_PYJR01000133.1	Protein Homology	CDS	208786	209769	.	-	0	ID=cds-WP_135401210.1;Parent=gene-C9E94_RS20630;Dbxref=GenBank:WP_135401210.1;Name=WP_135401210.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=C9E94_RS20630;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_135401210.1;transl_table=11
NZ_PYJR01000133.1	cmsearch	sequence_feature	209832	209955	.	-	.	ID=id-NZ_PYJR01000133.1:209832..209955;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PYJR01000133.1	RefSeq	gene	209906	209950	.	-	.	ID=gene-C9E94_RS20635;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=C9E94_RS20635;old_locus_tag=C9E94_21145
NZ_PYJR01000133.1	Protein Homology	CDS	209906	209950	.	-	0	ID=cds-WP_001386830.1;Parent=gene-C9E94_RS20635;Dbxref=GenBank:WP_001386830.1;Name=WP_001386830.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=C9E94_RS20635;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	210071	210427	.	-	.	ID=gene-C9E94_RS20640;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=C9E94_RS20640;old_locus_tag=C9E94_21150
NZ_PYJR01000133.1	Protein Homology	CDS	210071	210427	.	-	0	ID=cds-WP_000124850.1;Parent=gene-C9E94_RS20640;Dbxref=GenBank:WP_000124850.1;Name=WP_000124850.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=C9E94_RS20640;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	210478	210675	.	-	.	ID=gene-C9E94_RS20645;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=C9E94_RS20645;old_locus_tag=C9E94_21155
NZ_PYJR01000133.1	Protein Homology	CDS	210478	210675	.	-	0	ID=cds-WP_001124225.1;Parent=gene-C9E94_RS20645;Dbxref=GenBank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=C9E94_RS20645;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	210771	211313	.	-	.	ID=gene-C9E94_RS20650;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=C9E94_RS20650;old_locus_tag=C9E94_21160
NZ_PYJR01000133.1	Protein Homology	CDS	210771	211313	.	-	0	ID=cds-WP_001574431.1;Parent=gene-C9E94_RS20650;Dbxref=GenBank:WP_001574431.1;Name=WP_001574431.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=C9E94_RS20650;product=translation initiation factor IF-3;protein_id=WP_001574431.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	211317	213245	.	-	.	ID=gene-C9E94_RS20655;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=C9E94_RS20655;old_locus_tag=C9E94_21165
NZ_PYJR01000133.1	Protein Homology	CDS	211317	213245	.	-	0	ID=cds-WP_001144226.1;Parent=gene-C9E94_RS20655;Dbxref=GenBank:WP_001144226.1;Name=WP_001144226.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=C9E94_RS20655;product=threonine--tRNA ligase;protein_id=WP_001144226.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	213505	214359	.	-	.	ID=gene-C9E94_RS20660;Name=C9E94_RS20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20660;old_locus_tag=C9E94_21170
NZ_PYJR01000133.1	Protein Homology	CDS	213505	214359	.	-	0	ID=cds-WP_001044092.1;Parent=gene-C9E94_RS20660;Dbxref=GenBank:WP_001044092.1;Name=WP_001044092.1;Ontology_term=GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=C9E94_RS20660;product=DNA/RNA non-specific endonuclease;protein_id=WP_001044092.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	214356	214670	.	-	.	ID=gene-C9E94_RS20665;Name=C9E94_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20665;old_locus_tag=C9E94_21175
NZ_PYJR01000133.1	Protein Homology	CDS	214356	214670	.	-	0	ID=cds-WP_135401211.1;Parent=gene-C9E94_RS20665;Dbxref=GenBank:WP_135401211.1;Name=WP_135401211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460295.1;locus_tag=C9E94_RS20665;product=hypothetical protein;protein_id=WP_135401211.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	214812	215771	.	+	.	ID=gene-C9E94_RS20670;Name=C9E94_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20670;old_locus_tag=C9E94_21180
NZ_PYJR01000133.1	Protein Homology	CDS	214812	215771	.	+	0	ID=cds-WP_001046434.1;Parent=gene-C9E94_RS20670;Dbxref=GenBank:WP_001046434.1;Name=WP_001046434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460294.1;locus_tag=C9E94_RS20670;product=lipid A deacylase LpxR family protein;protein_id=WP_001046434.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	215820	216578	.	-	.	ID=gene-C9E94_RS20675;Name=C9E94_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20675;old_locus_tag=C9E94_21185
NZ_PYJR01000133.1	Protein Homology	CDS	215820	216578	.	-	0	ID=cds-WP_000770984.1;Parent=gene-C9E94_RS20675;Dbxref=GenBank:WP_000770984.1;Name=WP_000770984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460293.1;locus_tag=C9E94_RS20675;product=DUF481 domain-containing protein;protein_id=WP_000770984.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	216867	217799	.	+	.	ID=gene-C9E94_RS20680;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=C9E94_RS20680;old_locus_tag=C9E94_21190
NZ_PYJR01000133.1	Protein Homology	CDS	216867	217799	.	+	0	ID=cds-WP_000251707.1;Parent=gene-C9E94_RS20680;Dbxref=GenBank:WP_000251707.1;Name=WP_000251707.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460292.1;locus_tag=C9E94_RS20680;product=6-phosphofructokinase II;protein_id=WP_000251707.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	217896	218186	.	+	.	ID=gene-C9E94_RS20685;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=C9E94_RS20685;old_locus_tag=C9E94_21195
NZ_PYJR01000133.1	Protein Homology	CDS	217896	218186	.	+	0	ID=cds-WP_000146133.1;Parent=gene-C9E94_RS20685;Dbxref=GenBank:WP_000146133.1;Name=WP_000146133.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460291.1;locus_tag=C9E94_RS20685;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000146133.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	218293	219153	.	+	.	ID=gene-C9E94_RS20690;Name=C9E94_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20690;old_locus_tag=C9E94_21200
NZ_PYJR01000133.1	Protein Homology	CDS	218293	219153	.	+	0	ID=cds-WP_000267686.1;Parent=gene-C9E94_RS20690;Dbxref=GenBank:WP_000267686.1;Name=WP_000267686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460290.1;locus_tag=C9E94_RS20690;product=fructosamine kinase family protein;protein_id=WP_000267686.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	219196	219732	.	-	.	ID=gene-C9E94_RS20695;Name=C9E94_RS20695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20695;old_locus_tag=C9E94_21205
NZ_PYJR01000133.1	Protein Homology	CDS	219196	219732	.	-	0	ID=cds-WP_000222158.1;Parent=gene-C9E94_RS20695;Dbxref=GenBank:WP_000222158.1;Name=WP_000222158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460289.1;locus_tag=C9E94_RS20695;product=YniB family protein;protein_id=WP_000222158.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	219881	220549	.	+	.	ID=gene-C9E94_RS20700;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=C9E94_RS20700;old_locus_tag=C9E94_21210
NZ_PYJR01000133.1	Protein Homology	CDS	219881	220549	.	+	0	ID=cds-WP_000106854.1;Parent=gene-C9E94_RS20700;Dbxref=GenBank:WP_000106854.1;Name=WP_000106854.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460288.1;locus_tag=C9E94_RS20700;product=hexitol phosphatase HxpB;protein_id=WP_000106854.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	220687	221286	.	+	.	ID=gene-C9E94_RS20705;Name=C9E94_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20705;old_locus_tag=C9E94_21215
NZ_PYJR01000133.1	Protein Homology	CDS	220687	221286	.	+	0	ID=cds-WP_000505804.1;Parent=gene-C9E94_RS20705;Dbxref=GenBank:WP_000505804.1;Name=WP_000505804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460287.3;locus_tag=C9E94_RS20705;product=metal-dependent hydrolase;protein_id=WP_000505804.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	221423	222814	.	+	.	ID=gene-C9E94_RS20710;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=C9E94_RS20710;old_locus_tag=C9E94_21220
NZ_PYJR01000133.1	Protein Homology	CDS	221423	222814	.	+	0	ID=cds-WP_001010662.1;Parent=gene-C9E94_RS20710;Dbxref=GenBank:WP_001010662.1;Name=WP_001010662.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=C9E94_RS20710;product=cystine/sulfocysteine:cation symporter;protein_id=WP_001010662.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	222917	223159	.	-	.	ID=gene-C9E94_RS20715;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=C9E94_RS20715;old_locus_tag=C9E94_21225
NZ_PYJR01000133.1	Protein Homology	CDS	222917	223159	.	-	0	ID=cds-WP_000977510.1;Parent=gene-C9E94_RS20715;Dbxref=GenBank:WP_000977510.1;Name=WP_000977510.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460285.1;locus_tag=C9E94_RS20715;product=cell division activator CedA;protein_id=WP_000977510.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	223376	225628	.	+	.	ID=gene-C9E94_RS20720;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=C9E94_RS20720;old_locus_tag=C9E94_21230
NZ_PYJR01000133.1	Protein Homology	CDS	223376	225628	.	+	0	ID=cds-WP_000019105.1;Parent=gene-C9E94_RS20720;Dbxref=GenBank:WP_000019105.1;Name=WP_000019105.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=C9E94_RS20720;product=catalase HPII;protein_id=WP_000019105.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	225672	226430	.	-	.	ID=gene-C9E94_RS20725;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=C9E94_RS20725;old_locus_tag=C9E94_21235
NZ_PYJR01000133.1	Protein Homology	CDS	225672	226430	.	-	0	ID=cds-WP_000442730.1;Parent=gene-C9E94_RS20725;Dbxref=GenBank:WP_000442730.1;Name=WP_000442730.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460283.1;locus_tag=C9E94_RS20725;product=chitin disaccharide deacetylase;protein_id=WP_000442730.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	226443	227798	.	-	.	ID=gene-C9E94_RS20730;Name=C9E94_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20730;old_locus_tag=C9E94_21240
NZ_PYJR01000133.1	Protein Homology	CDS	226443	227798	.	-	0	ID=cds-WP_000078780.1;Parent=gene-C9E94_RS20730;Dbxref=GenBank:WP_000078780.1;Name=WP_000078780.1;Ontology_term=GO:0005975,GO:0008706,GO:0046872;gbkey=CDS;go_function=6-phospho-beta-glucosidase activity|0008706||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460282.1;locus_tag=C9E94_RS20730;product=6-phospho-beta-glucosidase;protein_id=WP_000078780.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	227923	228765	.	-	.	ID=gene-C9E94_RS20735;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=C9E94_RS20735;old_locus_tag=C9E94_21245
NZ_PYJR01000133.1	Protein Homology	CDS	227923	228765	.	-	0	ID=cds-WP_000983393.1;Parent=gene-C9E94_RS20735;Dbxref=GenBank:WP_000983393.1;Name=WP_000983393.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460281.1;locus_tag=C9E94_RS20735;product=transcriptional regulator ChbR;protein_id=WP_000983393.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	228776	229123	.	-	.	ID=gene-C9E94_RS20740;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=C9E94_RS20740;old_locus_tag=C9E94_21250
NZ_PYJR01000133.1	Protein Homology	CDS	228776	229123	.	-	0	ID=cds-WP_000459883.1;Parent=gene-C9E94_RS20740;Dbxref=GenBank:WP_000459883.1;Name=WP_000459883.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460280.1;locus_tag=C9E94_RS20740;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_000459883.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	229174	230532	.	-	.	ID=gene-C9E94_RS20745;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=C9E94_RS20745;old_locus_tag=C9E94_21255
NZ_PYJR01000133.1	Protein Homology	CDS	229174	230532	.	-	0	ID=cds-WP_000073063.1;Parent=gene-C9E94_RS20745;Dbxref=GenBank:WP_000073063.1;Name=WP_000073063.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=C9E94_RS20745;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_000073063.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	230615	230935	.	-	.	ID=gene-C9E94_RS20750;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=C9E94_RS20750;old_locus_tag=C9E94_21260
NZ_PYJR01000133.1	Protein Homology	CDS	230615	230935	.	-	0	ID=cds-WP_000412161.1;Parent=gene-C9E94_RS20750;Dbxref=GenBank:WP_000412161.1;Name=WP_000412161.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460278.1;locus_tag=C9E94_RS20750;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_000412161.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	231236	231577	.	-	.	ID=gene-C9E94_RS20760;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=C9E94_RS20760;old_locus_tag=C9E94_21270
NZ_PYJR01000133.1	Protein Homology	CDS	231236	231577	.	-	0	ID=cds-WP_001039301.1;Parent=gene-C9E94_RS20760;Dbxref=GenBank:WP_001039301.1;Name=WP_001039301.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460277.1;locus_tag=C9E94_RS20760;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_001039301.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	231796	232623	.	+	.	ID=gene-C9E94_RS20765;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=C9E94_RS20765;old_locus_tag=C9E94_21275
NZ_PYJR01000133.1	Protein Homology	CDS	231796	232623	.	+	0	ID=cds-WP_023202071.1;Parent=gene-C9E94_RS20765;Dbxref=GenBank:WP_023202071.1;Name=WP_023202071.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460276.1;locus_tag=C9E94_RS20765;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_023202071.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	232744	233625	.	+	.	ID=gene-C9E94_RS20770;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=C9E94_RS20770;old_locus_tag=C9E94_21280
NZ_PYJR01000133.1	Protein Homology	CDS	232744	233625	.	+	0	ID=cds-WP_001805139.1;Parent=gene-C9E94_RS20770;Dbxref=GenBank:WP_001805139.1;Name=WP_001805139.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233065.1;locus_tag=C9E94_RS20770;product=excinuclease Cho;protein_id=WP_001805139.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	233700	234185	.	-	.	ID=gene-C9E94_RS20775;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=C9E94_RS20775;old_locus_tag=C9E94_21285
NZ_PYJR01000133.1	Protein Homology	CDS	233700	234185	.	-	0	ID=cds-WP_135401212.1;Parent=gene-C9E94_RS20775;Dbxref=GenBank:WP_135401212.1;Name=WP_135401212.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460274.1;locus_tag=C9E94_RS20775;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_135401212.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	234521	235489	.	-	.	ID=gene-C9E94_RS20780;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=C9E94_RS20780;old_locus_tag=C9E94_21295
NZ_PYJR01000133.1	Protein Homology	CDS	234521	235489	.	-	0	ID=cds-WP_135401213.1;Parent=gene-C9E94_RS20780;Dbxref=GenBank:WP_135401213.1;Name=WP_135401213.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460273.1;locus_tag=C9E94_RS20780;product=succinylglutamate desuccinylase;protein_id=WP_135401213.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	235482	236825	.	-	.	ID=gene-C9E94_RS20785;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=C9E94_RS20785;old_locus_tag=C9E94_21300
NZ_PYJR01000133.1	Protein Homology	CDS	235482	236825	.	-	0	ID=cds-WP_052944228.1;Parent=gene-C9E94_RS20785;Dbxref=GenBank:WP_052944228.1;Name=WP_052944228.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460272.1;locus_tag=C9E94_RS20785;product=N-succinylarginine dihydrolase;protein_id=WP_052944228.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	236822	238300	.	-	.	ID=gene-C9E94_RS20790;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=C9E94_RS20790;old_locus_tag=C9E94_21305
NZ_PYJR01000133.1	Protein Homology	CDS	236822	238300	.	-	0	ID=cds-WP_063809670.1;Parent=gene-C9E94_RS20790;Dbxref=GenBank:WP_063809670.1;Name=WP_063809670.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460271.1;locus_tag=C9E94_RS20790;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_063809670.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	238297	239331	.	-	.	ID=gene-C9E94_RS20795;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=C9E94_RS20795;old_locus_tag=C9E94_21310
NZ_PYJR01000133.1	Protein Homology	CDS	238297	239331	.	-	0	ID=cds-WP_001263889.1;Parent=gene-C9E94_RS20795;Dbxref=GenBank:WP_001263889.1;Name=WP_001263889.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460270.1;locus_tag=C9E94_RS20795;product=arginine N-succinyltransferase;protein_id=WP_001263889.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	239322	240548	.	-	.	ID=gene-C9E94_RS20800;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;locus_tag=C9E94_RS20800;old_locus_tag=C9E94_21315
NZ_PYJR01000133.1	Protein Homology	CDS	239322	240548	.	-	0	ID=cds-WP_135401214.1;Parent=gene-C9E94_RS20800;Dbxref=GenBank:WP_135401214.1;Name=WP_135401214.1;gbkey=CDS;gene=astC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460269.1;locus_tag=C9E94_RS20800;product=succinylornithine/acetylornithine transaminase;protein_id=WP_135401214.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	240994	241800	.	+	.	ID=gene-C9E94_RS20805;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=C9E94_RS20805;old_locus_tag=C9E94_21325
NZ_PYJR01000133.1	Protein Homology	CDS	240994	241800	.	+	0	ID=cds-WP_000673954.1;Parent=gene-C9E94_RS20805;Dbxref=GenBank:WP_000673954.1;Name=WP_000673954.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460268.1;locus_tag=C9E94_RS20805;product=exodeoxyribonuclease III;protein_id=WP_000673954.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	241873	242289	.	+	.	ID=gene-C9E94_RS20810;Name=C9E94_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20810;old_locus_tag=C9E94_21330
NZ_PYJR01000133.1	Protein Homology	CDS	241873	242289	.	+	0	ID=cds-WP_000592135.1;Parent=gene-C9E94_RS20810;Dbxref=GenBank:WP_000592135.1;Name=WP_000592135.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460267.1;locus_tag=C9E94_RS20810;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WP_000592135.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	242249	242524	.	-	.	ID=gene-C9E94_RS20815;Name=C9E94_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20815;old_locus_tag=C9E94_21335
NZ_PYJR01000133.1	Protein Homology	CDS	242249	242524	.	-	0	ID=cds-WP_000336847.1;Parent=gene-C9E94_RS20815;Dbxref=GenBank:WP_000336847.1;Name=WP_000336847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465441.1;locus_tag=C9E94_RS20815;product=YnjH family protein;protein_id=WP_000336847.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	242763	244106	.	+	.	ID=gene-C9E94_RS20820;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=C9E94_RS20820;old_locus_tag=C9E94_21340
NZ_PYJR01000133.1	Protein Homology	CDS	242763	244106	.	+	0	ID=cds-WP_000372865.1;Parent=gene-C9E94_RS20820;Dbxref=GenBank:WP_000372865.1;Name=WP_000372865.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460265.1;locus_tag=C9E94_RS20820;product=NADP-specific glutamate dehydrogenase;protein_id=WP_000372865.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	244136	246085	.	-	.	ID=gene-C9E94_RS20825;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=C9E94_RS20825;old_locus_tag=C9E94_21345
NZ_PYJR01000133.1	Protein Homology	CDS	244136	246085	.	-	0	ID=cds-WP_001235863.1;Parent=gene-C9E94_RS20825;Dbxref=GenBank:WP_001235863.1;Name=WP_001235863.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460264.1;locus_tag=C9E94_RS20825;product=DNA topoisomerase III;protein_id=WP_001235863.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	246090	247133	.	-	.	ID=gene-C9E94_RS20830;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=C9E94_RS20830;old_locus_tag=C9E94_21350
NZ_PYJR01000133.1	Protein Homology	CDS	246090	247133	.	-	0	ID=cds-WP_001294900.1;Parent=gene-C9E94_RS20830;Dbxref=GenBank:WP_001294900.1;Name=WP_001294900.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460263.1;locus_tag=C9E94_RS20830;product=selenide%2C water dikinase SelD;protein_id=WP_001294900.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	247251	247802	.	-	.	ID=gene-C9E94_RS20835;Name=C9E94_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20835;old_locus_tag=C9E94_21355
NZ_PYJR01000133.1	Protein Homology	CDS	247251	247802	.	-	0	ID=cds-WP_135401215.1;Parent=gene-C9E94_RS20835;Dbxref=GenBank:WP_135401215.1;Name=WP_135401215.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460262.1;locus_tag=C9E94_RS20835;product=NAD(P)H nitroreductase;protein_id=WP_135401215.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	247976	249832	.	+	.	ID=gene-C9E94_RS20840;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=C9E94_RS20840;old_locus_tag=C9E94_21360
NZ_PYJR01000133.1	Protein Homology	CDS	247976	249832	.	+	0	ID=cds-WP_001259874.1;Parent=gene-C9E94_RS20840;Dbxref=GenBank:WP_001259874.1;Name=WP_001259874.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460261.1;locus_tag=C9E94_RS20840;product=signal peptide peptidase SppA;protein_id=WP_001259874.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	249928	250944	.	+	.	ID=gene-C9E94_RS20845;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=C9E94_RS20845;old_locus_tag=C9E94_21365
NZ_PYJR01000133.1	Protein Homology	CDS	249928	250944	.	+	0	ID=cds-WP_001170134.1;Parent=gene-C9E94_RS20845;Dbxref=GenBank:WP_001170134.1;Name=WP_001170134.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460260.1;locus_tag=C9E94_RS20845;product=asparaginase;protein_id=WP_001170134.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	250971	251627	.	+	.	ID=gene-C9E94_RS20850;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=C9E94_RS20850;old_locus_tag=C9E94_21370
NZ_PYJR01000133.1	Protein Homology	CDS	250971	251627	.	+	0	ID=cds-WP_000184708.1;Parent=gene-C9E94_RS20850;Dbxref=GenBank:WP_000184708.1;Name=WP_000184708.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460259.1;locus_tag=C9E94_RS20850;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_000184708.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	251977	252255	.	-	.	ID=gene-C9E94_RS20855;Name=C9E94_RS20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20855;old_locus_tag=C9E94_21375
NZ_PYJR01000133.1	Protein Homology	CDS	251977	252255	.	-	0	ID=cds-WP_001046864.1;Parent=gene-C9E94_RS20855;Dbxref=GenBank:WP_001046864.1;Name=WP_001046864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460258.1;locus_tag=C9E94_RS20855;product=YeaC family protein;protein_id=WP_001046864.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	252297	252710	.	-	.	ID=gene-C9E94_RS20860;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=C9E94_RS20860;old_locus_tag=C9E94_21380
NZ_PYJR01000133.1	Protein Homology	CDS	252297	252710	.	-	0	ID=cds-WP_001519539.1;Parent=gene-C9E94_RS20860;Dbxref=GenBank:WP_001519539.1;Name=WP_001519539.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=C9E94_RS20860;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_001519539.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	253052	254047	.	+	.	ID=gene-C9E94_RS20865;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=C9E94_RS20865;old_locus_tag=C9E94_21385
NZ_PYJR01000133.1	Protein Homology	CDS	253052	254047	.	+	0	ID=cds-WP_000153505.1;Parent=gene-C9E94_RS20865;Dbxref=GenBank:WP_000153505.1;Name=WP_000153505.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=C9E94_RS20865;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153505.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	254381	255265	.	+	.	ID=gene-C9E94_RS20875;Name=C9E94_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20875;old_locus_tag=C9E94_21395
NZ_PYJR01000133.1	Protein Homology	CDS	254381	255265	.	+	0	ID=cds-WP_135401216.1;Parent=gene-C9E94_RS20875;Dbxref=GenBank:WP_135401216.1;Name=WP_135401216.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=C9E94_RS20875;product=D-hexose-6-phosphate mutarotase;protein_id=WP_135401216.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	255364	256221	.	-	.	ID=gene-C9E94_RS20880;Name=C9E94_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20880;old_locus_tag=C9E94_21400
NZ_PYJR01000133.1	Protein Homology	CDS	255364	256221	.	-	0	ID=cds-WP_135401217.1;Parent=gene-C9E94_RS20880;Dbxref=GenBank:WP_135401217.1;Name=WP_135401217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460254.1;locus_tag=C9E94_RS20880;product=aldo/keto reductase;protein_id=WP_135401217.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	256318	257514	.	-	.	ID=gene-C9E94_RS20885;Name=C9E94_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20885;old_locus_tag=C9E94_21405
NZ_PYJR01000133.1	Protein Homology	CDS	256318	257514	.	-	0	ID=cds-WP_000029247.1;Parent=gene-C9E94_RS20885;Dbxref=GenBank:WP_000029247.1;Name=WP_000029247.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460253.1;locus_tag=C9E94_RS20885;product=anaerobic sulfatase maturase;protein_id=WP_000029247.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	257804	258550	.	-	.	ID=gene-C9E94_RS20890;Name=C9E94_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20890;old_locus_tag=C9E94_21410
NZ_PYJR01000133.1	Protein Homology	CDS	257804	258550	.	-	0	ID=cds-WP_000163762.1;Parent=gene-C9E94_RS20890;Dbxref=GenBank:WP_000163762.1;Name=WP_000163762.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460252.1;locus_tag=C9E94_RS20890;product=MipA/OmpV family protein;protein_id=WP_000163762.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	258977	260911	.	+	.	ID=gene-C9E94_RS20895;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=C9E94_RS20895;old_locus_tag=C9E94_21415
NZ_PYJR01000133.1	Protein Homology	CDS	258977	260911	.	+	0	ID=cds-WP_001518010.1;Parent=gene-C9E94_RS20895;Dbxref=GenBank:WP_001518010.1;Name=WP_001518010.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=C9E94_RS20895;product=protein kinase YeaG;protein_id=WP_001518010.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	261034	262320	.	+	.	ID=gene-C9E94_RS20900;Name=C9E94_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20900;old_locus_tag=C9E94_21420
NZ_PYJR01000133.1	Protein Homology	CDS	261034	262320	.	+	0	ID=cds-WP_000219714.1;Parent=gene-C9E94_RS20900;Dbxref=GenBank:WP_000219714.1;Name=WP_000219714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460250.1;locus_tag=C9E94_RS20900;product=YeaH/YhbH family protein;protein_id=WP_000219714.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	262474	262692	.	-	.	ID=gene-C9E94_RS20905;Name=C9E94_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20905;old_locus_tag=C9E94_21425
NZ_PYJR01000133.1	GeneMarkS-2+	CDS	262474	262692	.	-	0	ID=cds-WP_139754715.1;Parent=gene-C9E94_RS20905;Dbxref=GenBank:WP_139754715.1;Name=WP_139754715.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS20905;product=hypothetical protein;protein_id=WP_139754715.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	262992	264485	.	+	.	ID=gene-C9E94_RS20910;Name=dgcJ;gbkey=Gene;gene=dgcJ;gene_biotype=protein_coding;locus_tag=C9E94_RS20910;old_locus_tag=C9E94_21430
NZ_PYJR01000133.1	Protein Homology	CDS	262992	264485	.	+	0	ID=cds-WP_001048661.1;Parent=gene-C9E94_RS20910;Dbxref=GenBank:WP_001048661.1;Name=WP_001048661.1;Ontology_term=GO:0043709,GO:1902201,GO:0052621;gbkey=CDS;gene=dgcJ;go_function=diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA,negative regulation of bacterial-type flagellum-dependent cell motility|1902201||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460249.1;locus_tag=C9E94_RS20910;product=diguanylate cyclase DgcJ;protein_id=WP_001048661.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	264535	265053	.	+	.	ID=gene-C9E94_RS20915;Name=C9E94_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20915;old_locus_tag=C9E94_21435
NZ_PYJR01000133.1	Protein Homology	CDS	264535	265053	.	+	0	ID=cds-WP_010989016.1;Parent=gene-C9E94_RS20915;Dbxref=GenBank:WP_010989016.1;Name=WP_010989016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460248.1;locus_tag=C9E94_RS20915;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_010989016.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	265050	265157	.	-	.	ID=gene-C9E94_RS20920;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=C9E94_RS20920;old_locus_tag=C9E94_21440
NZ_PYJR01000133.1	Protein Homology	CDS	265050	265157	.	-	0	ID=cds-WP_000272239.1;Parent=gene-C9E94_RS20920;Dbxref=GenBank:WP_000272239.1;Name=WP_000272239.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460247.1;locus_tag=C9E94_RS20920;product=small membrane protein YoaI;protein_id=WP_000272239.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	265363	265809	.	+	.	ID=gene-C9E94_RS20925;Name=C9E94_RS20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20925;old_locus_tag=C9E94_21445
NZ_PYJR01000133.1	Protein Homology	CDS	265363	265809	.	+	0	ID=cds-WP_000460698.1;Parent=gene-C9E94_RS20925;Dbxref=GenBank:WP_000460698.1;Name=WP_000460698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460246.2;locus_tag=C9E94_RS20925;product=DUF441 domain-containing protein;protein_id=WP_000460698.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	265789	266583	.	-	.	ID=gene-C9E94_RS20930;Name=C9E94_RS20930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20930;old_locus_tag=C9E94_21450
NZ_PYJR01000133.1	Protein Homology	CDS	265789	266583	.	-	0	ID=cds-WP_000579798.1;Parent=gene-C9E94_RS20930;Dbxref=GenBank:WP_000579798.1;Name=WP_000579798.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460245.1;locus_tag=C9E94_RS20930;product=AraC family transcriptional regulator;protein_id=WP_000579798.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	266684	267868	.	+	.	ID=gene-C9E94_RS20935;Name=C9E94_RS20935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20935;old_locus_tag=C9E94_21455
NZ_PYJR01000133.1	Protein Homology	CDS	266684	267868	.	+	0	ID=cds-WP_000205341.1;Parent=gene-C9E94_RS20935;Dbxref=GenBank:WP_000205341.1;Name=WP_000205341.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460244.1;locus_tag=C9E94_RS20935;product=CynX/NimT family MFS transporter;protein_id=WP_000205341.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	267987	268334	.	+	.	ID=gene-C9E94_RS20940;Name=C9E94_RS20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20940;old_locus_tag=C9E94_21460
NZ_PYJR01000133.1	Protein Homology	CDS	267987	268334	.	+	0	ID=cds-WP_001222527.1;Parent=gene-C9E94_RS20940;Dbxref=GenBank:WP_001222527.1;Name=WP_001222527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460243.1;locus_tag=C9E94_RS20940;product=DUF488 domain-containing protein;protein_id=WP_001222527.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	268320	268631	.	-	.	ID=gene-C9E94_RS20945;Name=C9E94_RS20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20945;old_locus_tag=C9E94_21465
NZ_PYJR01000133.1	Protein Homology	CDS	268320	268631	.	-	0	ID=cds-WP_000487129.1;Parent=gene-C9E94_RS20945;Dbxref=GenBank:WP_000487129.1;Name=WP_000487129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460242.1;locus_tag=C9E94_RS20945;product=hypothetical protein;protein_id=WP_000487129.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	268700	268951	.	-	.	ID=gene-C9E94_RS20950;Name=C9E94_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20950;old_locus_tag=C9E94_21470
NZ_PYJR01000133.1	Protein Homology	CDS	268700	268951	.	-	0	ID=cds-WP_000673492.1;Parent=gene-C9E94_RS20950;Dbxref=GenBank:WP_000673492.1;Name=WP_000673492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460241.1;locus_tag=C9E94_RS20950;product=putative hemolysin;protein_id=WP_000673492.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	269147	269245	.	+	.	ID=gene-C9E94_RS20955;Name=C9E94_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20955;old_locus_tag=C9E94_21475
NZ_PYJR01000133.1	Protein Homology	CDS	269147	269245	.	+	0	ID=cds-WP_001589065.1;Parent=gene-C9E94_RS20955;Dbxref=GenBank:WP_001589065.1;Name=WP_001589065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=C9E94_RS20955;product=YoaK family small membrane protein;protein_id=WP_001589065.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	269384	269632	.	-	.	ID=gene-C9E94_RS20960;Name=C9E94_RS20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20960;old_locus_tag=C9E94_21480
NZ_PYJR01000133.1	Protein Homology	CDS	269384	269632	.	-	0	ID=cds-WP_000512149.1;Parent=gene-C9E94_RS20960;Dbxref=GenBank:WP_000512149.1;Name=WP_000512149.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460240.1;locus_tag=C9E94_RS20960;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000512149.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	269946	270587	.	-	.	ID=gene-C9E94_RS20970;Name=C9E94_RS20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20970;old_locus_tag=C9E94_21490
NZ_PYJR01000133.1	Protein Homology	CDS	269946	270587	.	-	0	ID=cds-WP_001669273.1;Parent=gene-C9E94_RS20970;Dbxref=GenBank:WP_001669273.1;Name=WP_001669273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460239.1;locus_tag=C9E94_RS20970;product=hypothetical protein;protein_id=WP_001669273.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	270817	270999	.	-	.	ID=gene-C9E94_RS20975;Name=C9E94_RS20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20975;old_locus_tag=C9E94_21495
NZ_PYJR01000133.1	Protein Homology	CDS	270817	270999	.	-	0	ID=cds-WP_000513733.1;Parent=gene-C9E94_RS20975;Dbxref=GenBank:WP_000513733.1;Name=WP_000513733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460238.1;locus_tag=C9E94_RS20975;product=DUF1869 domain-containing protein;protein_id=WP_000513733.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	271002	271364	.	-	.	ID=gene-C9E94_RS20980;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=C9E94_RS20980;old_locus_tag=C9E94_21500
NZ_PYJR01000133.1	Protein Homology	CDS	271002	271364	.	-	0	ID=cds-WP_001248993.1;Parent=gene-C9E94_RS20980;Dbxref=GenBank:WP_001248993.1;Name=WP_001248993.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460237.1;locus_tag=C9E94_RS20980;product=DUF1971 domain-containing protein YeaR;protein_id=WP_001248993.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	271537	272175	.	-	.	ID=gene-C9E94_RS20985;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=C9E94_RS20985;old_locus_tag=C9E94_21510
NZ_PYJR01000133.1	Protein Homology	CDS	271537	272175	.	-	0	ID=cds-WP_000457190.1;Parent=gene-C9E94_RS20985;Dbxref=GenBank:WP_000457190.1;Name=WP_000457190.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460236.1;locus_tag=C9E94_RS20985;product=leucine efflux protein LeuE;protein_id=WP_000457190.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	272372	272917	.	-	.	ID=gene-C9E94_RS20990;Name=C9E94_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20990;old_locus_tag=C9E94_21515
NZ_PYJR01000133.1	Protein Homology	CDS	272372	272917	.	-	0	ID=cds-WP_080203924.1;Parent=gene-C9E94_RS20990;Dbxref=GenBank:WP_080203924.1;Name=WP_080203924.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460235.1;locus_tag=C9E94_RS20990;product=chorismate mutase;protein_id=WP_080203924.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	pseudogene	273000	273154	.	+	.	ID=gene-C9E94_RS23715;Name=C9E94_RS23715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23715;pseudo=true
NZ_PYJR01000133.1	Protein Homology	CDS	273000	273154	.	+	0	ID=cds-C9E94_RS23715;Parent=gene-C9E94_RS23715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460234.1;locus_tag=C9E94_RS23715;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	273233	273481	.	+	.	ID=gene-C9E94_RS20995;Name=C9E94_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS20995;old_locus_tag=C9E94_21520
NZ_PYJR01000133.1	Protein Homology	CDS	273233	273481	.	+	0	ID=cds-WP_000208086.1;Parent=gene-C9E94_RS20995;Dbxref=GenBank:WP_000208086.1;Name=WP_000208086.1;Ontology_term=GO:0071468,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460233.1;locus_tag=C9E94_RS20995;product=biofilm/acid-resistance regulator YmgB/AriR;protein_id=WP_000208086.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	273736	274584	.	-	.	ID=gene-C9E94_RS21000;Name=C9E94_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21000;old_locus_tag=C9E94_21530
NZ_PYJR01000133.1	Protein Homology	CDS	273736	274584	.	-	0	ID=cds-WP_135401218.1;Parent=gene-C9E94_RS21000;Dbxref=GenBank:WP_135401218.1;Name=WP_135401218.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460232.1;locus_tag=C9E94_RS21000;product=MerR family transcriptional regulator;protein_id=WP_135401218.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	274653	275246	.	-	.	ID=gene-C9E94_RS21005;Name=C9E94_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21005;old_locus_tag=C9E94_21535
NZ_PYJR01000133.1	Protein Homology	CDS	274653	275246	.	-	0	ID=cds-WP_001682351.1;Parent=gene-C9E94_RS21005;Dbxref=GenBank:WP_001682351.1;Name=WP_001682351.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460231.1;locus_tag=C9E94_RS21005;product=helix-turn-helix domain-containing protein;protein_id=WP_001682351.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	275391	276179	.	-	.	ID=gene-C9E94_RS21010;Name=aadA;gbkey=Gene;gene=aadA;gene_biotype=protein_coding;locus_tag=C9E94_RS21010;old_locus_tag=C9E94_21540
NZ_PYJR01000133.1	Protein Homology	CDS	275391	276179	.	-	0	ID=cds-WP_023993480.1;Parent=gene-C9E94_RS21010;Dbxref=GenBank:WP_023993480.1;Name=WP_023993480.1;gbkey=CDS;gene=aadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460230.1;locus_tag=C9E94_RS21010;product=cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9);protein_id=WP_023993480.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	276287	276934	.	-	.	ID=gene-C9E94_RS21015;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=C9E94_RS21015;old_locus_tag=C9E94_21545
NZ_PYJR01000133.1	Protein Homology	CDS	276287	276934	.	-	0	ID=cds-WP_001537483.1;Parent=gene-C9E94_RS21015;Dbxref=GenBank:WP_001537483.1;Name=WP_001537483.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460229.3;locus_tag=C9E94_RS21015;product=metal-binding protein ZinT;protein_id=WP_001537483.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	277046	277122	.	-	.	ID=gene-C9E94_RS21020;Name=C9E94_RS21020;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS21020;old_locus_tag=C9E94_21550
NZ_PYJR01000133.1	tRNAscan-SE	tRNA	277046	277122	.	-	.	ID=rna-C9E94_RS21020;Parent=gene-C9E94_RS21020;anticodon=(pos:complement(277086..277088));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS21020;product=tRNA-Arg
NZ_PYJR01000133.1	tRNAscan-SE	exon	277046	277122	.	-	.	ID=exon-C9E94_RS21020-1;Parent=rna-C9E94_RS21020;anticodon=(pos:complement(277086..277088));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS21020;product=tRNA-Arg
NZ_PYJR01000133.1	RefSeq	gene	277131	277457	.	-	.	ID=gene-C9E94_RS21025;Name=C9E94_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21025;old_locus_tag=C9E94_21555
NZ_PYJR01000133.1	Protein Homology	CDS	277131	277457	.	-	0	ID=cds-WP_001183699.1;Parent=gene-C9E94_RS21025;Dbxref=GenBank:WP_001183699.1;Name=WP_001183699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460228.1;locus_tag=C9E94_RS21025;product=four-helix bundle copper-binding protein;protein_id=WP_001183699.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	277651	278784	.	+	.	ID=gene-C9E94_RS21030;Name=C9E94_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21030;old_locus_tag=C9E94_21560
NZ_PYJR01000133.1	Protein Homology	CDS	277651	278784	.	+	0	ID=cds-WP_000456073.1;Parent=gene-C9E94_RS21030;Dbxref=GenBank:WP_000456073.1;Name=WP_000456073.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460227.1;locus_tag=C9E94_RS21030;product=mechanosensitive ion channel family protein;protein_id=WP_000456073.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	278866	279456	.	-	.	ID=gene-C9E94_RS21035;Name=C9E94_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21035;old_locus_tag=C9E94_21565
NZ_PYJR01000133.1	Protein Homology	CDS	278866	279456	.	-	0	ID=cds-WP_000947460.1;Parent=gene-C9E94_RS21035;Dbxref=GenBank:WP_000947460.1;Name=WP_000947460.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460226.1;locus_tag=C9E94_RS21035;product=ATP-binding cassette domain-containing protein;protein_id=WP_000947460.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	279450	280247	.	-	.	ID=gene-C9E94_RS21040;Name=C9E94_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21040;old_locus_tag=C9E94_21570
NZ_PYJR01000133.1	Protein Homology	CDS	279450	280247	.	-	0	ID=cds-WP_000950207.1;Parent=gene-C9E94_RS21040;Dbxref=GenBank:WP_000950207.1;Name=WP_000950207.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460225.1;locus_tag=C9E94_RS21040;product=ATP-binding cassette domain-containing protein;protein_id=WP_000950207.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	280241	281053	.	-	.	ID=gene-C9E94_RS21045;Name=C9E94_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21045;old_locus_tag=C9E94_21575
NZ_PYJR01000133.1	Protein Homology	CDS	280241	281053	.	-	0	ID=cds-WP_017440981.1;Parent=gene-C9E94_RS21045;Dbxref=GenBank:WP_017440981.1;Name=WP_017440981.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460224.1;locus_tag=C9E94_RS21045;product=ABC transporter permease;protein_id=WP_017440981.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	281043	282017	.	-	.	ID=gene-C9E94_RS21050;Name=C9E94_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21050;old_locus_tag=C9E94_21580
NZ_PYJR01000133.1	Protein Homology	CDS	281043	282017	.	-	0	ID=cds-WP_012218885.1;Parent=gene-C9E94_RS21050;Dbxref=GenBank:WP_012218885.1;Name=WP_012218885.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460223.1;locus_tag=C9E94_RS21050;product=ABC transporter permease;protein_id=WP_012218885.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	282017	283651	.	-	.	ID=gene-C9E94_RS21055;Name=C9E94_RS21055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21055;old_locus_tag=C9E94_21585
NZ_PYJR01000133.1	Protein Homology	CDS	282017	283651	.	-	0	ID=cds-WP_135401223.1;Parent=gene-C9E94_RS21055;Dbxref=GenBank:WP_135401223.1;Name=WP_135401223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460222.1;locus_tag=C9E94_RS21055;product=ABC transporter substrate-binding protein;protein_id=WP_135401223.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	284333	284647	.	+	.	ID=gene-C9E94_RS21060;Name=C9E94_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21060;old_locus_tag=C9E94_21590
NZ_PYJR01000133.1	Protein Homology	CDS	284333	284647	.	+	0	ID=cds-WP_000182479.1;Parent=gene-C9E94_RS21060;Dbxref=GenBank:WP_000182479.1;Name=WP_000182479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460221.1;locus_tag=C9E94_RS21060;product=TRL-like family protein;protein_id=WP_000182479.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	284796	285326	.	+	.	ID=gene-C9E94_RS21065;Name=C9E94_RS21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21065;old_locus_tag=C9E94_21595
NZ_PYJR01000133.1	Protein Homology	CDS	284796	285326	.	+	0	ID=cds-WP_000929980.1;Parent=gene-C9E94_RS21065;Dbxref=GenBank:WP_000929980.1;Name=WP_000929980.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460220.1;locus_tag=C9E94_RS21065;product=cytochrome b;protein_id=WP_000929980.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	285408	286451	.	-	.	ID=gene-C9E94_RS21070;Name=C9E94_RS21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21070;old_locus_tag=C9E94_21600
NZ_PYJR01000133.1	Protein Homology	CDS	285408	286451	.	-	0	ID=cds-WP_000761745.1;Parent=gene-C9E94_RS21070;Dbxref=GenBank:WP_000761745.1;Name=WP_000761745.1;Ontology_term=GO:0005975,GO:0004308,GO:0016997;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA,alpha-sialidase activity|0016997||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460219.1;locus_tag=C9E94_RS21070;product=sialidase family protein;protein_id=WP_000761745.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	286790	287257	.	-	.	ID=gene-C9E94_RS21075;Name=C9E94_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21075;old_locus_tag=C9E94_21605
NZ_PYJR01000133.1	Protein Homology	CDS	286790	287257	.	-	0	ID=cds-WP_167853658.1;Parent=gene-C9E94_RS21075;Dbxref=GenBank:WP_167853658.1;Name=WP_167853658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460218.1;locus_tag=C9E94_RS21075;product=Hsp20 family protein;protein_id=WP_167853658.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	287409	287681	.	-	.	ID=gene-C9E94_RS21080;Name=C9E94_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21080;old_locus_tag=C9E94_21610
NZ_PYJR01000133.1	Protein Homology	CDS	287409	287681	.	-	0	ID=cds-WP_000927827.1;Parent=gene-C9E94_RS21080;Dbxref=GenBank:WP_000927827.1;Name=WP_000927827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460217.1;locus_tag=C9E94_RS21080;product=hypothetical protein;protein_id=WP_000927827.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	287881	288006	.	-	.	ID=gene-C9E94_RS21085;Name=C9E94_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21085;old_locus_tag=C9E94_21615
NZ_PYJR01000133.1	Protein Homology	CDS	287881	288006	.	-	0	ID=cds-WP_000758947.1;Parent=gene-C9E94_RS21085;Dbxref=GenBank:WP_000758947.1;Name=WP_000758947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748351.1;locus_tag=C9E94_RS21085;product=lipoprotein;protein_id=WP_000758947.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	288384	288728	.	+	.	ID=gene-C9E94_RS21090;Name=C9E94_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21090;old_locus_tag=C9E94_21620
NZ_PYJR01000133.1	Protein Homology	CDS	288384	288728	.	+	0	ID=cds-WP_000977725.1;Parent=gene-C9E94_RS21090;Dbxref=GenBank:WP_000977725.1;Name=WP_000977725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460216.1;locus_tag=C9E94_RS21090;product=c-type lysozyme inhibitor;protein_id=WP_000977725.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	289483	289559	.	-	.	ID=gene-C9E94_RS21095;Name=C9E94_RS21095;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS21095;old_locus_tag=C9E94_21625
NZ_PYJR01000133.1	tRNAscan-SE	tRNA	289483	289559	.	-	.	ID=rna-C9E94_RS21095;Parent=gene-C9E94_RS21095;anticodon=(pos:complement(289523..289525));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS21095;product=tRNA-Arg
NZ_PYJR01000133.1	tRNAscan-SE	exon	289483	289559	.	-	.	ID=exon-C9E94_RS21095-1;Parent=rna-C9E94_RS21095;anticodon=(pos:complement(289523..289525));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS21095;product=tRNA-Arg
NZ_PYJR01000133.1	RefSeq	gene	289950	290507	.	-	.	ID=gene-C9E94_RS21100;Name=pagC;gbkey=Gene;gene=pagC;gene_biotype=protein_coding;locus_tag=C9E94_RS21100;old_locus_tag=C9E94_21630
NZ_PYJR01000133.1	Protein Homology	CDS	289950	290507	.	-	0	ID=cds-WP_000789471.1;Parent=gene-C9E94_RS21100;Dbxref=GenBank:WP_000789471.1;Name=WP_000789471.1;gbkey=CDS;gene=pagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460215.1;locus_tag=C9E94_RS21100;product=virulence membrane protein PagC;protein_id=WP_000789471.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	291319	291582	.	+	.	ID=gene-C9E94_RS21110;Name=pagD;gbkey=Gene;gene=pagD;gene_biotype=protein_coding;locus_tag=C9E94_RS21110;old_locus_tag=C9E94_21640
NZ_PYJR01000133.1	Protein Homology	CDS	291319	291582	.	+	0	ID=cds-WP_001535993.1;Parent=gene-C9E94_RS21110;Dbxref=GenBank:WP_001535993.1;Name=WP_001535993.1;gbkey=CDS;gene=pagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460214.1;locus_tag=C9E94_RS21110;product=virulence protein PagD;protein_id=WP_001535993.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	291714	291926	.	+	.	ID=gene-C9E94_RS21115;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=protein_coding;locus_tag=C9E94_RS21115;old_locus_tag=C9E94_21645
NZ_PYJR01000133.1	Protein Homology	CDS	291714	291926	.	+	0	ID=cds-WP_001537306.1;Parent=gene-C9E94_RS21115;Dbxref=GenBank:WP_001537306.1;Name=WP_001537306.1;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460213.1;locus_tag=C9E94_RS21115;product=cold shock-like protein CspF;protein_id=WP_001537306.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	292341	292862	.	+	.	ID=gene-C9E94_RS21120;Name=C9E94_RS21120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21120;old_locus_tag=C9E94_21650
NZ_PYJR01000133.1	Protein Homology	CDS	292341	292862	.	+	0	ID=cds-WP_001520581.1;Parent=gene-C9E94_RS21120;Dbxref=GenBank:WP_001520581.1;Name=WP_001520581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460212.1;locus_tag=C9E94_RS21120;product=RICIN domain-containing protein;protein_id=WP_001520581.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	293053	293292	.	+	.	ID=gene-C9E94_RS21125;Name=msgA;gbkey=Gene;gene=msgA;gene_biotype=protein_coding;locus_tag=C9E94_RS21125;old_locus_tag=C9E94_21655
NZ_PYJR01000133.1	Protein Homology	CDS	293053	293292	.	+	0	ID=cds-WP_000497451.1;Parent=gene-C9E94_RS21125;Dbxref=GenBank:WP_000497451.1;Name=WP_000497451.1;gbkey=CDS;gene=msgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460211.1;locus_tag=C9E94_RS21125;product=virulence protein MsgA;protein_id=WP_000497451.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	293782	294570	.	+	.	ID=gene-C9E94_RS21130;Name=envF;gbkey=Gene;gene=envF;gene_biotype=protein_coding;locus_tag=C9E94_RS21130;old_locus_tag=C9E94_21660
NZ_PYJR01000133.1	Protein Homology	CDS	293782	294570	.	+	0	ID=cds-WP_001033398.1;Parent=gene-C9E94_RS21130;Dbxref=GenBank:WP_001033398.1;Name=WP_001033398.1;gbkey=CDS;gene=envF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460210.1;locus_tag=C9E94_RS21130;product=putative envelope lipoprotein EnvF;protein_id=WP_001033398.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	294892	295098	.	+	.	ID=gene-C9E94_RS23815;Name=C9E94_RS23815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23815;old_locus_tag=C9E94_21665
NZ_PYJR01000133.1	Protein Homology	CDS	294892	295098	.	+	0	ID=cds-WP_000787625.1;Parent=gene-C9E94_RS23815;Dbxref=GenBank:WP_000787625.1;Name=WP_000787625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000787631.1;locus_tag=C9E94_RS23815;product=hypothetical protein;protein_id=WP_000787625.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	pseudogene	295380	295445	.	-	.	ID=gene-C9E94_RS23950;Name=C9E94_RS23950;end_range=295445,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23950;partial=true;pseudo=true;start_range=.,295380
NZ_PYJR01000133.1	Protein Homology	CDS	295380	295445	.	-	0	ID=cds-C9E94_RS23950;Parent=gene-C9E94_RS23950;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=295445,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264264.1;locus_tag=C9E94_RS23950;partial=true;product=phage tail protein;pseudo=true;start_range=.,295380;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	295566	296690	.	-	.	ID=gene-C9E94_RS21140;Name=sopF;gbkey=Gene;gene=sopF;gene_biotype=protein_coding;locus_tag=C9E94_RS21140;old_locus_tag=C9E94_21675
NZ_PYJR01000133.1	Protein Homology	CDS	295566	296690	.	-	0	ID=cds-WP_021000253.1;Parent=gene-C9E94_RS21140;Dbxref=GenBank:WP_021000253.1;Name=WP_021000253.1;gbkey=CDS;gene=sopF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460209.1;locus_tag=C9E94_RS21140;product=type III secretion system effector SopF;protein_id=WP_021000253.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	297138	298388	.	-	.	ID=gene-C9E94_RS21145;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=C9E94_RS21145;old_locus_tag=C9E94_21680
NZ_PYJR01000133.1	Protein Homology	CDS	297138	298388	.	-	0	ID=cds-WP_000444506.1;Parent=gene-C9E94_RS21145;Dbxref=GenBank:WP_000444506.1;Name=WP_000444506.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=C9E94_RS21145;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_000444506.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	298560	299225	.	+	.	ID=gene-C9E94_RS21150;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=C9E94_RS21150;old_locus_tag=C9E94_21685
NZ_PYJR01000133.1	Protein Homology	CDS	298560	299225	.	+	0	ID=cds-WP_001249412.1;Parent=gene-C9E94_RS21150;Dbxref=GenBank:WP_001249412.1;Name=WP_001249412.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460207.1;locus_tag=C9E94_RS21150;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_001249412.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	299222	299551	.	+	.	ID=gene-C9E94_RS21155;Name=C9E94_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21155;old_locus_tag=C9E94_21690
NZ_PYJR01000133.1	Protein Homology	CDS	299222	299551	.	+	0	ID=cds-WP_000825957.1;Parent=gene-C9E94_RS21155;Dbxref=GenBank:WP_000825957.1;Name=WP_000825957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460206.1;locus_tag=C9E94_RS21155;product=lysozyme inhibitor LprI family protein;protein_id=WP_000825957.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	299563	300024	.	+	.	ID=gene-C9E94_RS21160;Name=C9E94_RS21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21160;old_locus_tag=C9E94_21695
NZ_PYJR01000133.1	Protein Homology	CDS	299563	300024	.	+	0	ID=cds-WP_000476069.1;Parent=gene-C9E94_RS21160;Dbxref=GenBank:WP_000476069.1;Name=WP_000476069.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460205.1;locus_tag=C9E94_RS21160;product=NUDIX hydrolase;protein_id=WP_000476069.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	300078	301184	.	+	.	ID=gene-C9E94_RS21165;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=C9E94_RS21165;old_locus_tag=C9E94_21700
NZ_PYJR01000133.1	Protein Homology	CDS	300078	301184	.	+	0	ID=cds-WP_000004540.1;Parent=gene-C9E94_RS21165;Dbxref=GenBank:WP_000004540.1;Name=WP_000004540.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309632.2;locus_tag=C9E94_RS21165;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_000004540.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	301271	301912	.	+	.	ID=gene-C9E94_RS21170;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=C9E94_RS21170;old_locus_tag=C9E94_21705
NZ_PYJR01000133.1	Protein Homology	CDS	301271	301912	.	+	0	ID=cds-WP_001519653.1;Parent=gene-C9E94_RS21170;Dbxref=GenBank:WP_001519653.1;Name=WP_001519653.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=C9E94_RS21170;product=high frequency lysogenization protein HflD;protein_id=WP_001519653.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	301916	303286	.	+	.	ID=gene-C9E94_RS21175;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=C9E94_RS21175;old_locus_tag=C9E94_21710
NZ_PYJR01000133.1	Protein Homology	CDS	301916	303286	.	+	0	ID=cds-WP_000423763.1;Parent=gene-C9E94_RS21175;Dbxref=GenBank:WP_000423763.1;Name=WP_000423763.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=C9E94_RS21175;product=adenylosuccinate lyase;protein_id=WP_000423763.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	303413	304084	.	+	.	ID=gene-C9E94_RS21180;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=C9E94_RS21180;old_locus_tag=C9E94_21715
NZ_PYJR01000133.1	Protein Homology	CDS	303413	304084	.	+	0	ID=cds-WP_001537766.1;Parent=gene-C9E94_RS21180;Dbxref=GenBank:WP_001537766.1;Name=WP_001537766.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707059.1;locus_tag=C9E94_RS21180;product=two-component system response regulator PhoP;protein_id=WP_001537766.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	304084	305547	.	+	.	ID=gene-C9E94_RS21185;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=C9E94_RS21185;old_locus_tag=C9E94_21720
NZ_PYJR01000133.1	Protein Homology	CDS	304084	305547	.	+	0	ID=cds-WP_001031687.1;Parent=gene-C9E94_RS21185;Dbxref=GenBank:WP_001031687.1;Name=WP_001031687.1;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460200.1;locus_tag=C9E94_RS21185;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_001031687.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	305628	306749	.	+	.	ID=gene-C9E94_RS21190;Name=roxA;gbkey=Gene;gene=roxA;gene_biotype=protein_coding;gene_synonym=ycfD;locus_tag=C9E94_RS21190;old_locus_tag=C9E94_21725
NZ_PYJR01000133.1	Protein Homology	CDS	305628	306749	.	+	0	ID=cds-WP_000456514.1;Parent=gene-C9E94_RS21190;Dbxref=GenBank:WP_000456514.1;Name=WP_000456514.1;gbkey=CDS;gene=roxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460199.1;locus_tag=C9E94_RS21190;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;protein_id=WP_000456514.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	306789	308123	.	-	.	ID=gene-C9E94_RS21195;Name=C9E94_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21195;old_locus_tag=C9E94_21730
NZ_PYJR01000133.1	Protein Homology	CDS	306789	308123	.	-	0	ID=cds-WP_052934789.1;Parent=gene-C9E94_RS21195;Dbxref=GenBank:WP_052934789.1;Name=WP_052934789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460198.1;locus_tag=C9E94_RS21195;product=hypothetical protein;protein_id=WP_052934789.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	308127	309356	.	-	.	ID=gene-C9E94_RS21200;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=C9E94_RS21200;old_locus_tag=C9E94_21735
NZ_PYJR01000133.1	Protein Homology	CDS	308127	309356	.	-	0	ID=cds-WP_000359412.1;Parent=gene-C9E94_RS21200;Dbxref=GenBank:WP_000359412.1;Name=WP_000359412.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460197.1;locus_tag=C9E94_RS21200;product=peptidase T;protein_id=WP_000359412.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	309607	310743	.	+	.	ID=gene-C9E94_RS21205;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=C9E94_RS21205;old_locus_tag=C9E94_21740
NZ_PYJR01000133.1	Protein Homology	CDS	309607	310743	.	+	0	ID=cds-WP_000531607.1;Parent=gene-C9E94_RS21205;Dbxref=GenBank:WP_000531607.1;Name=WP_000531607.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460196.1;locus_tag=C9E94_RS21205;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_000531607.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	310727	311590	.	+	.	ID=gene-C9E94_RS21210;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=C9E94_RS21210;old_locus_tag=C9E94_21745
NZ_PYJR01000133.1	Protein Homology	CDS	310727	311590	.	+	0	ID=cds-WP_000799391.1;Parent=gene-C9E94_RS21210;Dbxref=GenBank:WP_000799391.1;Name=WP_000799391.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460195.1;locus_tag=C9E94_RS21210;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_000799391.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	311919	312929	.	+	.	ID=gene-C9E94_RS21215;Name=sifA;gbkey=Gene;gene=sifA;gene_biotype=protein_coding;locus_tag=C9E94_RS21215;old_locus_tag=C9E94_21750
NZ_PYJR01000133.1	Protein Homology	CDS	311919	312929	.	+	0	ID=cds-WP_001520468.1;Parent=gene-C9E94_RS21215;Dbxref=GenBank:WP_001520468.1;Name=WP_001520468.1;gbkey=CDS;gene=sifA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460194.1;locus_tag=C9E94_RS21215;product=SPI-2 type III secretion system effector SifA;protein_id=WP_001520468.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	313245	314024	.	+	.	ID=gene-C9E94_RS21220;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=C9E94_RS21220;old_locus_tag=C9E94_21755
NZ_PYJR01000133.1	Protein Homology	CDS	313245	314024	.	+	0	ID=cds-WP_000580299.1;Parent=gene-C9E94_RS21220;Dbxref=GenBank:WP_000580299.1;Name=WP_000580299.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460193.1;locus_tag=C9E94_RS21220;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_000580299.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	314049	315095	.	+	.	ID=gene-C9E94_RS21225;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=C9E94_RS21225;old_locus_tag=C9E94_21760
NZ_PYJR01000133.1	Protein Homology	CDS	314049	315095	.	+	0	ID=cds-WP_000759329.1;Parent=gene-C9E94_RS21225;Dbxref=GenBank:WP_000759329.1;Name=WP_000759329.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=C9E94_RS21225;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_000759329.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	315177	315998	.	-	.	ID=gene-C9E94_RS21230;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=C9E94_RS21230;old_locus_tag=C9E94_21765
NZ_PYJR01000133.1	Protein Homology	CDS	315177	315998	.	-	0	ID=cds-WP_001191856.1;Parent=gene-C9E94_RS21230;Dbxref=GenBank:WP_001191856.1;Name=WP_001191856.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=C9E94_RS21230;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_001191856.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	316017	316928	.	-	.	ID=gene-C9E94_RS21235;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=C9E94_RS21235;old_locus_tag=C9E94_21770
NZ_PYJR01000133.1	Protein Homology	CDS	316017	316928	.	-	0	ID=cds-WP_000291331.1;Parent=gene-C9E94_RS21235;Dbxref=GenBank:WP_000291331.1;Name=WP_000291331.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460190.1;locus_tag=C9E94_RS21235;product=N-acetylglucosamine kinase;protein_id=WP_000291331.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	316957	318201	.	-	.	ID=gene-C9E94_RS21240;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=C9E94_RS21240;old_locus_tag=C9E94_21775
NZ_PYJR01000133.1	Protein Homology	CDS	316957	318201	.	-	0	ID=cds-WP_000168091.1;Parent=gene-C9E94_RS21240;Dbxref=GenBank:WP_000168091.1;Name=WP_000168091.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460189.1;locus_tag=C9E94_RS21240;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_000168091.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	318201	318902	.	-	.	ID=gene-C9E94_RS21245;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=C9E94_RS21245;old_locus_tag=C9E94_21780
NZ_PYJR01000133.1	Protein Homology	CDS	318201	318902	.	-	0	ID=cds-WP_001033714.1;Parent=gene-C9E94_RS21245;Dbxref=GenBank:WP_001033714.1;Name=WP_001033714.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460188.1;locus_tag=C9E94_RS21245;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_001033714.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	318895	320094	.	-	.	ID=gene-C9E94_RS21250;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=C9E94_RS21250;old_locus_tag=C9E94_21785
NZ_PYJR01000133.1	Protein Homology	CDS	318895	320094	.	-	0	ID=cds-WP_001532069.1;Parent=gene-C9E94_RS21250;Dbxref=GenBank:WP_001532069.1;Name=WP_001532069.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=C9E94_RS21250;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_001532069.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	320432	323878	.	+	.	ID=gene-C9E94_RS21255;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=C9E94_RS21255;old_locus_tag=C9E94_21790
NZ_PYJR01000133.1	Protein Homology	CDS	320432	323878	.	+	0	ID=cds-WP_001114323.1;Parent=gene-C9E94_RS21255;Dbxref=GenBank:WP_001114323.1;Name=WP_001114323.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460186.1;locus_tag=C9E94_RS21255;product=transcription-repair coupling factor;protein_id=WP_001114323.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	324026	324991	.	+	.	ID=gene-C9E94_RS21260;Name=ldtC;gbkey=Gene;gene=ldtC;gene_biotype=protein_coding;locus_tag=C9E94_RS21260;old_locus_tag=C9E94_21795
NZ_PYJR01000133.1	Protein Homology	CDS	324026	324991	.	+	0	ID=cds-WP_000482970.1;Parent=gene-C9E94_RS21260;Dbxref=GenBank:WP_000482970.1;Name=WP_000482970.1;gbkey=CDS;gene=ldtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460185.1;locus_tag=C9E94_RS21260;product=L%2CD-transpeptidase LdtC;protein_id=WP_000482970.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	325088	325345	.	-	.	ID=gene-C9E94_RS21265;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=C9E94_RS21265;old_locus_tag=C9E94_21800
NZ_PYJR01000133.1	Protein Homology	CDS	325088	325345	.	-	0	ID=cds-WP_000800158.1;Parent=gene-C9E94_RS21265;Dbxref=GenBank:WP_000800158.1;Name=WP_000800158.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460184.1;locus_tag=C9E94_RS21265;product=multiple stress resistance protein BhsA;protein_id=WP_000800158.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	325587	326222	.	+	.	ID=gene-C9E94_RS21270;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=C9E94_RS21270;old_locus_tag=C9E94_21805
NZ_PYJR01000133.1	Protein Homology	CDS	325587	326222	.	+	0	ID=cds-WP_000205985.1;Parent=gene-C9E94_RS21270;Dbxref=GenBank:WP_000205985.1;Name=WP_000205985.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835112.1;locus_tag=C9E94_RS21270;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WP_000205985.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	326297	326836	.	-	.	ID=gene-C9E94_RS21275;Name=C9E94_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21275;old_locus_tag=C9E94_21810
NZ_PYJR01000133.1	Protein Homology	CDS	326297	326836	.	-	0	ID=cds-WP_001043449.1;Parent=gene-C9E94_RS21275;Dbxref=GenBank:WP_001043449.1;Name=WP_001043449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460182.1;locus_tag=C9E94_RS21275;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001043449.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	327015	328319	.	-	.	ID=gene-C9E94_RS21280;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=C9E94_RS21280;old_locus_tag=C9E94_21815
NZ_PYJR01000133.1	Protein Homology	CDS	327015	328319	.	-	0	ID=cds-WP_000211053.1;Parent=gene-C9E94_RS21280;Dbxref=GenBank:WP_000211053.1;Name=WP_000211053.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=C9E94_RS21280;product=NADH-quinone dehydrogenase;protein_id=WP_000211053.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	328573	329115	.	-	.	ID=gene-C9E94_RS21285;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=C9E94_RS21285;old_locus_tag=C9E94_21820
NZ_PYJR01000133.1	Protein Homology	CDS	328573	329115	.	-	0	ID=cds-WP_000587943.1;Parent=gene-C9E94_RS21285;Dbxref=GenBank:WP_000587943.1;Name=WP_000587943.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=C9E94_RS21285;product=alpha/beta hydrolase YcfP;protein_id=WP_000587943.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	329140	330165	.	-	.	ID=gene-C9E94_RS21290;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=C9E94_RS21290;old_locus_tag=C9E94_21825
NZ_PYJR01000133.1	Protein Homology	CDS	329140	330165	.	-	0	ID=cds-WP_000529340.1;Parent=gene-C9E94_RS21290;Dbxref=GenBank:WP_000529340.1;Name=WP_000529340.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460179.1;locus_tag=C9E94_RS21290;product=beta-N-acetylhexosaminidase;protein_id=WP_000529340.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	330176	331000	.	-	.	ID=gene-C9E94_RS21295;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=C9E94_RS21295;old_locus_tag=C9E94_21830
NZ_PYJR01000133.1	Protein Homology	CDS	330176	331000	.	-	0	ID=cds-WP_001257342.1;Parent=gene-C9E94_RS21295;Dbxref=GenBank:WP_001257342.1;Name=WP_001257342.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460178.1;locus_tag=C9E94_RS21295;product=thiamine kinase;protein_id=WP_001257342.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	330981	331619	.	-	.	ID=gene-C9E94_RS21300;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=C9E94_RS21300;old_locus_tag=C9E94_21835
NZ_PYJR01000133.1	Protein Homology	CDS	330981	331619	.	-	0	ID=cds-WP_000164359.1;Parent=gene-C9E94_RS21300;Dbxref=GenBank:WP_000164359.1;Name=WP_000164359.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460177.1;locus_tag=C9E94_RS21300;product=penicillin-binding protein activator LpoB;protein_id=WP_000164359.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	331633	332007	.	-	.	ID=gene-C9E94_RS21305;Name=C9E94_RS21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21305;old_locus_tag=C9E94_21840
NZ_PYJR01000133.1	Protein Homology	CDS	331633	332007	.	-	0	ID=cds-WP_000589563.1;Parent=gene-C9E94_RS21305;Dbxref=GenBank:WP_000589563.1;Name=WP_000589563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460176.1;locus_tag=C9E94_RS21305;product=YcfL family protein;protein_id=WP_000589563.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	332010	332369	.	-	.	ID=gene-C9E94_RS21310;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=C9E94_RS21310;old_locus_tag=C9E94_21845
NZ_PYJR01000133.1	Protein Homology	CDS	332010	332369	.	-	0	ID=cds-WP_001532068.1;Parent=gene-C9E94_RS21310;Dbxref=GenBank:WP_001532068.1;Name=WP_001532068.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460175.1;locus_tag=C9E94_RS21310;product=purine nucleoside phosphoramidase;protein_id=WP_001532068.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	pseudogene	332711	334885	.	+	.	ID=gene-C9E94_RS21315;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=pseudogene;locus_tag=C9E94_RS21315;old_locus_tag=C9E94_21850;pseudo=true
NZ_PYJR01000133.1	Protein Homology	CDS	332711	334885	.	+	0	ID=cds-C9E94_RS21315;Parent=gene-C9E94_RS21315;Note=internal stop;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=C9E94_RS21315;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;pseudo=true;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	334970	336403	.	-	.	ID=gene-C9E94_RS21320;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=C9E94_RS21320;old_locus_tag=C9E94_21855
NZ_PYJR01000133.1	Protein Homology	CDS	334970	336403	.	-	0	ID=cds-WP_000475705.1;Parent=gene-C9E94_RS21320;Dbxref=GenBank:WP_000475705.1;Name=WP_000475705.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460173.1;locus_tag=C9E94_RS21320;product=PTS glucose transporter subunit IIBC;protein_id=WP_000475705.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	336698	337495	.	-	.	ID=gene-C9E94_RS21325;Name=C9E94_RS21325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21325;old_locus_tag=C9E94_21860
NZ_PYJR01000133.1	Protein Homology	CDS	336698	337495	.	-	0	ID=cds-WP_000480268.1;Parent=gene-C9E94_RS21325;Dbxref=GenBank:WP_000480268.1;Name=WP_000480268.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460172.1;locus_tag=C9E94_RS21325;product=metal-dependent hydrolase;protein_id=WP_000480268.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	337506	338510	.	-	.	ID=gene-C9E94_RS21330;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=C9E94_RS21330;old_locus_tag=C9E94_21865
NZ_PYJR01000133.1	Protein Homology	CDS	337506	338510	.	-	0	ID=cds-WP_000872453.1;Parent=gene-C9E94_RS21330;Dbxref=GenBank:WP_000872453.1;Name=WP_000872453.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460171.1;locus_tag=C9E94_RS21330;product=DNA polymerase III subunit delta';protein_id=WP_000872453.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	338507	339148	.	-	.	ID=gene-C9E94_RS21335;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=C9E94_RS21335;old_locus_tag=C9E94_21870
NZ_PYJR01000133.1	Protein Homology	CDS	338507	339148	.	-	0	ID=cds-WP_000535396.1;Parent=gene-C9E94_RS21335;Dbxref=GenBank:WP_000535396.1;Name=WP_000535396.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460170.1;locus_tag=C9E94_RS21335;product=dTMP kinase;protein_id=WP_000535396.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	339138	340160	.	-	.	ID=gene-C9E94_RS21340;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=C9E94_RS21340;old_locus_tag=C9E94_21875
NZ_PYJR01000133.1	Protein Homology	CDS	339138	340160	.	-	0	ID=cds-WP_000736459.1;Parent=gene-C9E94_RS21340;Dbxref=GenBank:WP_000736459.1;Name=WP_000736459.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460169.1;locus_tag=C9E94_RS21340;product=cell division protein YceG;protein_id=WP_000736459.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	340163	340972	.	-	.	ID=gene-C9E94_RS21345;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=C9E94_RS21345;old_locus_tag=C9E94_21880
NZ_PYJR01000133.1	Protein Homology	CDS	340163	340972	.	-	0	ID=cds-WP_000478660.1;Parent=gene-C9E94_RS21345;Dbxref=GenBank:WP_000478660.1;Name=WP_000478660.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460168.1;locus_tag=C9E94_RS21345;product=aminodeoxychorismate lyase;protein_id=WP_000478660.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	341096	342337	.	-	.	ID=gene-C9E94_RS21350;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=C9E94_RS21350;old_locus_tag=C9E94_21885
NZ_PYJR01000133.1	Protein Homology	CDS	341096	342337	.	-	0	ID=cds-WP_000044664.1;Parent=gene-C9E94_RS21350;Dbxref=GenBank:WP_000044664.1;Name=WP_000044664.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460167.1;locus_tag=C9E94_RS21350;product=beta-ketoacyl-ACP synthase II;protein_id=WP_000044664.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	342423	342659	.	-	.	ID=gene-C9E94_RS21355;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=C9E94_RS21355;old_locus_tag=C9E94_21890
NZ_PYJR01000133.1	Protein Homology	CDS	342423	342659	.	-	0	ID=cds-WP_000103754.1;Parent=gene-C9E94_RS21355;Dbxref=GenBank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=C9E94_RS21355;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	342815	343549	.	-	.	ID=gene-C9E94_RS21360;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=C9E94_RS21360;old_locus_tag=C9E94_21895
NZ_PYJR01000133.1	Protein Homology	CDS	342815	343549	.	-	0	ID=cds-WP_000007236.1;Parent=gene-C9E94_RS21360;Dbxref=GenBank:WP_000007236.1;Name=WP_000007236.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=C9E94_RS21360;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_000007236.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	343562	344491	.	-	.	ID=gene-C9E94_RS21365;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=C9E94_RS21365;old_locus_tag=C9E94_21900
NZ_PYJR01000133.1	Protein Homology	CDS	343562	344491	.	-	0	ID=cds-WP_000191342.1;Parent=gene-C9E94_RS21365;Dbxref=GenBank:WP_000191342.1;Name=WP_000191342.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460164.1;locus_tag=C9E94_RS21365;product=ACP S-malonyltransferase;protein_id=WP_000191342.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	344507	345460	.	-	.	ID=gene-C9E94_RS21370;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=C9E94_RS21370;old_locus_tag=C9E94_21905
NZ_PYJR01000133.1	Protein Homology	CDS	344507	345460	.	-	0	ID=cds-WP_000288148.1;Parent=gene-C9E94_RS21370;Dbxref=GenBank:WP_000288148.1;Name=WP_000288148.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=C9E94_RS21370;product=beta-ketoacyl-ACP synthase III;protein_id=WP_000288148.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	345540	346619	.	-	.	ID=gene-C9E94_RS21375;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=C9E94_RS21375;old_locus_tag=C9E94_21910
NZ_PYJR01000133.1	Protein Homology	CDS	345540	346619	.	-	0	ID=cds-WP_001518286.1;Parent=gene-C9E94_RS21375;Dbxref=GenBank:WP_001518286.1;Name=WP_001518286.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460162.1;locus_tag=C9E94_RS21375;product=phosphate acyltransferase PlsX;protein_id=WP_001518286.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	346753	346926	.	-	.	ID=gene-C9E94_RS21380;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=C9E94_RS21380;old_locus_tag=C9E94_21915
NZ_PYJR01000133.1	Protein Homology	CDS	346753	346926	.	-	0	ID=cds-WP_000290727.1;Parent=gene-C9E94_RS21380;Dbxref=GenBank:WP_000290727.1;Name=WP_000290727.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=C9E94_RS21380;product=50S ribosomal protein L32;protein_id=WP_000290727.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	346978	347499	.	-	.	ID=gene-C9E94_RS21385;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=C9E94_RS21385;old_locus_tag=C9E94_21920
NZ_PYJR01000133.1	Protein Homology	CDS	346978	347499	.	-	0	ID=cds-WP_001174492.1;Parent=gene-C9E94_RS21385;Dbxref=GenBank:WP_001174492.1;Name=WP_001174492.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=C9E94_RS21385;product=23S rRNA accumulation protein YceD;protein_id=WP_001174492.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	347697	348281	.	+	.	ID=gene-C9E94_RS21390;Name=C9E94_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21390;old_locus_tag=C9E94_21925
NZ_PYJR01000133.1	Protein Homology	CDS	347697	348281	.	+	0	ID=cds-WP_001137605.1;Parent=gene-C9E94_RS21390;Dbxref=GenBank:WP_001137605.1;Name=WP_001137605.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460159.1;locus_tag=C9E94_RS21390;product=Maf family protein;protein_id=WP_001137605.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	348353	348577	.	-	.	ID=gene-C9E94_RS21395;Name=C9E94_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21395;old_locus_tag=C9E94_21930
NZ_PYJR01000133.1	GeneMarkS-2+	CDS	348353	348577	.	-	0	ID=cds-WP_000528423.1;Parent=gene-C9E94_RS21395;Dbxref=GenBank:WP_000528423.1;Name=WP_000528423.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS21395;product=hypothetical protein;protein_id=WP_000528423.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	348783	349526	.	-	.	ID=gene-C9E94_RS21400;Name=C9E94_RS21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21400;old_locus_tag=C9E94_21935
NZ_PYJR01000133.1	Protein Homology	CDS	348783	349526	.	-	0	ID=cds-WP_080083309.1;Parent=gene-C9E94_RS21400;Dbxref=GenBank:WP_080083309.1;Name=WP_080083309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460158.1;locus_tag=C9E94_RS21400;product=DUF3053 domain-containing protein;protein_id=WP_080083309.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	349682	350641	.	-	.	ID=gene-C9E94_RS21405;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=C9E94_RS21405;old_locus_tag=C9E94_21940
NZ_PYJR01000133.1	Protein Homology	CDS	349682	350641	.	-	0	ID=cds-WP_000846314.1;Parent=gene-C9E94_RS21405;Dbxref=GenBank:WP_000846314.1;Name=WP_000846314.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460157.1;locus_tag=C9E94_RS21405;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_000846314.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	351215	354421	.	+	.	ID=gene-C9E94_RS21415;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=C9E94_RS21415;old_locus_tag=C9E94_21950
NZ_PYJR01000133.1	Protein Homology	CDS	351215	354421	.	+	0	ID=cds-WP_080203916.1;Parent=gene-C9E94_RS21415;Dbxref=GenBank:WP_080203916.1;Name=WP_080203916.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460156.1;locus_tag=C9E94_RS21415;product=ribonuclease E;protein_id=WP_080203916.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	354668	355621	.	-	.	ID=gene-C9E94_RS21420;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=C9E94_RS21420;old_locus_tag=C9E94_21955
NZ_PYJR01000133.1	Protein Homology	CDS	354668	355621	.	-	0	ID=cds-WP_001223032.1;Parent=gene-C9E94_RS21420;Dbxref=GenBank:WP_001223032.1;Name=WP_001223032.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460155.1;locus_tag=C9E94_RS21420;product=flagellar hook-associated protein FlgL;protein_id=WP_001223032.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	355636	357297	.	-	.	ID=gene-C9E94_RS21425;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=C9E94_RS21425;old_locus_tag=C9E94_21960
NZ_PYJR01000133.1	Protein Homology	CDS	355636	357297	.	-	0	ID=cds-WP_000096425.1;Parent=gene-C9E94_RS21425;Dbxref=GenBank:WP_000096425.1;Name=WP_000096425.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460154.1;locus_tag=C9E94_RS21425;product=flagellar hook-associated protein FlgK;protein_id=WP_000096425.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	357362	358312	.	-	.	ID=gene-C9E94_RS21430;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=C9E94_RS21430;old_locus_tag=C9E94_21965
NZ_PYJR01000133.1	Protein Homology	CDS	357362	358312	.	-	0	ID=cds-WP_000578685.1;Parent=gene-C9E94_RS21430;Dbxref=GenBank:WP_000578685.1;Name=WP_000578685.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460153.1;locus_tag=C9E94_RS21430;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_000578685.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	358312	359409	.	-	.	ID=gene-C9E94_RS21435;Name=C9E94_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21435;old_locus_tag=C9E94_21970
NZ_PYJR01000133.1	Protein Homology	CDS	358312	359409	.	-	0	ID=cds-WP_023217140.1;Parent=gene-C9E94_RS21435;Dbxref=GenBank:WP_023217140.1;Name=WP_023217140.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460152.1;locus_tag=C9E94_RS21435;product=flagellar basal body P-ring protein FlgI;protein_id=WP_023217140.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	359421	360119	.	-	.	ID=gene-C9E94_RS21440;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=C9E94_RS21440;old_locus_tag=C9E94_21975
NZ_PYJR01000133.1	Protein Homology	CDS	359421	360119	.	-	0	ID=cds-WP_001174897.1;Parent=gene-C9E94_RS21440;Dbxref=GenBank:WP_001174897.1;Name=WP_001174897.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460151.1;locus_tag=C9E94_RS21440;product=flagellar basal body L-ring protein FlgH;protein_id=WP_001174897.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	360173	360955	.	-	.	ID=gene-C9E94_RS21445;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=C9E94_RS21445;old_locus_tag=C9E94_21980
NZ_PYJR01000133.1	Protein Homology	CDS	360173	360955	.	-	0	ID=cds-WP_000625851.1;Parent=gene-C9E94_RS21445;Dbxref=GenBank:WP_000625851.1;Name=WP_000625851.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=C9E94_RS21445;product=flagellar basal-body rod protein FlgG;protein_id=WP_000625851.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	360969	361724	.	-	.	ID=gene-C9E94_RS21450;Name=C9E94_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21450;old_locus_tag=C9E94_21985
NZ_PYJR01000133.1	Protein Homology	CDS	360969	361724	.	-	0	ID=cds-WP_000349278.1;Parent=gene-C9E94_RS21450;Dbxref=GenBank:WP_000349278.1;Name=WP_000349278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460149.1;locus_tag=C9E94_RS21450;product=flagellar basal body rod protein FlgF;protein_id=WP_000349278.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	361745	362956	.	-	.	ID=gene-C9E94_RS21455;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=C9E94_RS21455;old_locus_tag=C9E94_21990
NZ_PYJR01000133.1	Protein Homology	CDS	361745	362956	.	-	0	ID=cds-WP_000010563.1;Parent=gene-C9E94_RS21455;Dbxref=GenBank:WP_000010563.1;Name=WP_000010563.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460148.1;locus_tag=C9E94_RS21455;product=flagellar hook protein FlgE;protein_id=WP_000010563.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	362983	363681	.	-	.	ID=gene-C9E94_RS21460;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=C9E94_RS21460;old_locus_tag=C9E94_21995
NZ_PYJR01000133.1	Protein Homology	CDS	362983	363681	.	-	0	ID=cds-WP_000020450.1;Parent=gene-C9E94_RS21460;Dbxref=GenBank:WP_000020450.1;Name=WP_000020450.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460147.1;locus_tag=C9E94_RS21460;product=flagellar hook assembly protein FlgD;protein_id=WP_000020450.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	363693	364097	.	-	.	ID=gene-C9E94_RS21465;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=C9E94_RS21465;old_locus_tag=C9E94_22000
NZ_PYJR01000133.1	Protein Homology	CDS	363693	364097	.	-	0	ID=cds-WP_135401220.1;Parent=gene-C9E94_RS21465;Dbxref=GenBank:WP_135401220.1;Name=WP_135401220.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=C9E94_RS21465;product=flagellar basal body rod protein FlgC;protein_id=WP_135401220.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	364101	364517	.	-	.	ID=gene-C9E94_RS21470;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=C9E94_RS21470;old_locus_tag=C9E94_22005
NZ_PYJR01000133.1	Protein Homology	CDS	364101	364517	.	-	0	ID=cds-WP_000887043.1;Parent=gene-C9E94_RS21470;Dbxref=GenBank:WP_000887043.1;Name=WP_000887043.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460145.1;locus_tag=C9E94_RS21470;product=flagellar basal body rod protein FlgB;protein_id=WP_000887043.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	364674	365333	.	+	.	ID=gene-C9E94_RS21475;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=C9E94_RS21475;old_locus_tag=C9E94_22015
NZ_PYJR01000133.1	Protein Homology	CDS	364674	365333	.	+	0	ID=cds-WP_001194074.1;Parent=gene-C9E94_RS21475;Dbxref=GenBank:WP_001194074.1;Name=WP_001194074.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460144.1;locus_tag=C9E94_RS21475;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_001194074.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	365425	365718	.	+	.	ID=gene-C9E94_RS21480;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=C9E94_RS21480;old_locus_tag=C9E94_22020
NZ_PYJR01000133.1	Protein Homology	CDS	365425	365718	.	+	0	ID=cds-WP_000020893.1;Parent=gene-C9E94_RS21480;Dbxref=GenBank:WP_000020893.1;Name=WP_000020893.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460143.1;locus_tag=C9E94_RS21480;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000020893.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	365723	366145	.	+	.	ID=gene-C9E94_RS21485;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=C9E94_RS21485;old_locus_tag=C9E94_22025
NZ_PYJR01000133.1	Protein Homology	CDS	365723	366145	.	+	0	ID=cds-WP_000197547.1;Parent=gene-C9E94_RS21485;Dbxref=GenBank:WP_000197547.1;Name=WP_000197547.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460142.1;locus_tag=C9E94_RS21485;product=flagella biosynthesis chaperone FlgN;protein_id=WP_000197547.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	366227	367762	.	-	.	ID=gene-C9E94_RS21490;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=C9E94_RS21490;old_locus_tag=C9E94_22030
NZ_PYJR01000133.1	Protein Homology	CDS	366227	367762	.	-	0	ID=cds-WP_001537775.1;Parent=gene-C9E94_RS21490;Dbxref=GenBank:WP_001537775.1;Name=WP_001537775.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226258.1;locus_tag=C9E94_RS21490;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_001537775.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	368066	368989	.	-	.	ID=gene-C9E94_RS21495;Name=C9E94_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21495;old_locus_tag=C9E94_22035
NZ_PYJR01000133.1	Protein Homology	CDS	368066	368989	.	-	0	ID=cds-WP_023993493.1;Parent=gene-C9E94_RS21495;Dbxref=GenBank:WP_023993493.1;Name=WP_023993493.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460140.1;locus_tag=C9E94_RS21495;product=Gfo/Idh/MocA family protein;protein_id=WP_023993493.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	368991	369638	.	-	.	ID=gene-C9E94_RS21500;Name=C9E94_RS21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21500;old_locus_tag=C9E94_22040
NZ_PYJR01000133.1	Protein Homology	CDS	368991	369638	.	-	0	ID=cds-WP_000873045.1;Parent=gene-C9E94_RS21500;Dbxref=GenBank:WP_000873045.1;Name=WP_000873045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460139.1;locus_tag=C9E94_RS21500;product=YceH family protein;protein_id=WP_000873045.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	369674	370258	.	-	.	ID=gene-C9E94_RS21505;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=C9E94_RS21505;old_locus_tag=C9E94_22045
NZ_PYJR01000133.1	Protein Homology	CDS	369674	370258	.	-	0	ID=cds-WP_000468204.1;Parent=gene-C9E94_RS21505;Dbxref=GenBank:WP_000468204.1;Name=WP_000468204.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460138.1;locus_tag=C9E94_RS21505;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_000468204.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	370495	371703	.	+	.	ID=gene-C9E94_RS21510;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=C9E94_RS21510;old_locus_tag=C9E94_22050
NZ_PYJR01000133.1	Protein Homology	CDS	370495	371703	.	+	0	ID=cds-WP_000092174.1;Parent=gene-C9E94_RS21510;Dbxref=GenBank:WP_000092174.1;Name=WP_000092174.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=C9E94_RS21510;product=multidrug efflux MFS transporter MdtH;protein_id=WP_000092174.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	371767	372414	.	+	.	ID=gene-C9E94_RS21515;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=C9E94_RS21515;old_locus_tag=C9E94_22055
NZ_PYJR01000133.1	Protein Homology	CDS	371767	372414	.	+	0	ID=cds-WP_000780893.1;Parent=gene-C9E94_RS21515;Dbxref=GenBank:WP_000780893.1;Name=WP_000780893.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460136.1;locus_tag=C9E94_RS21515;product=glutaredoxin 2;protein_id=WP_000780893.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	372539	373099	.	+	.	ID=gene-C9E94_RS21520;Name=C9E94_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21520;old_locus_tag=C9E94_22060
NZ_PYJR01000133.1	Protein Homology	CDS	372539	373099	.	+	0	ID=cds-WP_135401221.1;Parent=gene-C9E94_RS21520;Dbxref=GenBank:WP_135401221.1;Name=WP_135401221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460135.1;locus_tag=C9E94_RS21520;product=lipoprotein;protein_id=WP_135401221.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	373203	374249	.	+	.	ID=gene-C9E94_RS21525;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=C9E94_RS21525;old_locus_tag=C9E94_22065
NZ_PYJR01000133.1	Protein Homology	CDS	373203	374249	.	+	0	ID=cds-WP_000126597.1;Parent=gene-C9E94_RS21525;Dbxref=GenBank:WP_000126597.1;Name=WP_000126597.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460134.1;locus_tag=C9E94_RS21525;product=dihydroorotase;protein_id=WP_000126597.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	374323	374568	.	+	.	ID=gene-C9E94_RS21530;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=C9E94_RS21530;old_locus_tag=C9E94_22070
NZ_PYJR01000133.1	Protein Homology	CDS	374323	374568	.	+	0	ID=cds-WP_001217763.1;Parent=gene-C9E94_RS21530;Dbxref=GenBank:WP_001217763.1;Name=WP_001217763.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460133.1;locus_tag=C9E94_RS21530;product=DNA damage-inducible protein I;protein_id=WP_001217763.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	374858	375112	.	+	.	ID=gene-C9E94_RS21535;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=C9E94_RS21535;old_locus_tag=C9E94_22075
NZ_PYJR01000133.1	Protein Homology	CDS	374858	375112	.	+	0	ID=cds-WP_000414441.1;Parent=gene-C9E94_RS21535;Dbxref=GenBank:WP_000414441.1;Name=WP_000414441.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460132.3;locus_tag=C9E94_RS21535;product=biofilm formation regulator BssS;protein_id=WP_000414441.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	375224	376342	.	+	.	ID=gene-C9E94_RS21540;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=C9E94_RS21540;old_locus_tag=C9E94_22080
NZ_PYJR01000133.1	Protein Homology	CDS	375224	376342	.	+	0	ID=cds-WP_114064281.1;Parent=gene-C9E94_RS21540;Dbxref=GenBank:WP_114064281.1;Name=WP_114064281.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460131.1;locus_tag=C9E94_RS21540;product=N-methyl-L-tryptophan oxidase;protein_id=WP_114064281.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	376383	376496	.	+	.	ID=gene-C9E94_RS21545;Name=C9E94_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21545;old_locus_tag=C9E94_22085
NZ_PYJR01000133.1	Protein Homology	CDS	376383	376496	.	+	0	ID=cds-WP_001253282.1;Parent=gene-C9E94_RS21545;Dbxref=GenBank:WP_001253282.1;Name=WP_001253282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460130.1;locus_tag=C9E94_RS21545;product=YceO family protein;protein_id=WP_001253282.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	376759	377331	.	+	.	ID=gene-C9E94_RS21550;Name=C9E94_RS21550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21550;old_locus_tag=C9E94_22095
NZ_PYJR01000133.1	Protein Homology	CDS	376759	377331	.	+	0	ID=cds-WP_001159796.1;Parent=gene-C9E94_RS21550;Dbxref=GenBank:WP_001159796.1;Name=WP_001159796.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460129.1;locus_tag=C9E94_RS21550;product=cytochrome b;protein_id=WP_001159796.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	377328	377903	.	+	.	ID=gene-C9E94_RS21555;Name=C9E94_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21555;old_locus_tag=C9E94_22100
NZ_PYJR01000133.1	Protein Homology	CDS	377328	377903	.	+	0	ID=cds-WP_000739886.1;Parent=gene-C9E94_RS21555;Dbxref=GenBank:WP_000739886.1;Name=WP_000739886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460128.1;locus_tag=C9E94_RS21555;product=YceI family protein;protein_id=WP_000739886.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	377955	379007	.	-	.	ID=gene-C9E94_RS21560;Name=trhO;gbkey=Gene;gene=trhO;gene_biotype=protein_coding;gene_synonym=yceA;locus_tag=C9E94_RS21560;old_locus_tag=C9E94_22105
NZ_PYJR01000133.1	Protein Homology	CDS	377955	379007	.	-	0	ID=cds-WP_001144637.1;Parent=gene-C9E94_RS21560;Dbxref=GenBank:WP_001144637.1;Name=WP_001144637.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhO;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460127.1;locus_tag=C9E94_RS21560;product=oxygen-dependent tRNA uridine(34) hydroxylase TrhO;protein_id=WP_001144637.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	379227	380147	.	+	.	ID=gene-C9E94_RS21565;Name=C9E94_RS21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21565;old_locus_tag=C9E94_22110
NZ_PYJR01000133.1	Protein Homology	CDS	379227	380147	.	+	0	ID=cds-WP_000163973.1;Parent=gene-C9E94_RS21565;Dbxref=GenBank:WP_000163973.1;Name=WP_000163973.1;Ontology_term=GO:0036104,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460126.1;locus_tag=C9E94_RS21565;product=Kdo(2)-lipid IV(A) acyltransferase;protein_id=WP_000163973.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	380302	381516	.	+	.	ID=gene-C9E94_RS21570;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=C9E94_RS21570;old_locus_tag=C9E94_22120
NZ_PYJR01000133.1	Protein Homology	CDS	380302	381516	.	+	0	ID=cds-WP_000075053.1;Parent=gene-C9E94_RS21570;Dbxref=GenBank:WP_000075053.1;Name=WP_000075053.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460125.1;locus_tag=C9E94_RS21570;product=multidrug efflux MFS transporter MdtG;protein_id=WP_000075053.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	381598	381972	.	+	.	ID=gene-C9E94_RS21575;Name=C9E94_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21575;old_locus_tag=C9E94_22125
NZ_PYJR01000133.1	Protein Homology	CDS	381598	381972	.	+	0	ID=cds-WP_000180050.1;Parent=gene-C9E94_RS21575;Dbxref=GenBank:WP_000180050.1;Name=WP_000180050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460124.1;locus_tag=C9E94_RS21575;product=MysB family protein;protein_id=WP_000180050.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	381973	382200	.	-	.	ID=gene-C9E94_RS21580;Name=C9E94_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21580;old_locus_tag=C9E94_22130
NZ_PYJR01000133.1	Protein Homology	CDS	381973	382200	.	-	0	ID=cds-WP_001217832.1;Parent=gene-C9E94_RS21580;Dbxref=GenBank:WP_001217832.1;Name=WP_001217832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460123.1;locus_tag=C9E94_RS21580;product=YceK/YidQ family lipoprotein;protein_id=WP_001217832.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	382274	384817	.	-	.	ID=gene-C9E94_RS21585;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=C9E94_RS21585;old_locus_tag=C9E94_22135
NZ_PYJR01000133.1	Protein Homology	CDS	382274	384817	.	-	0	ID=cds-WP_001044607.1;Parent=gene-C9E94_RS21585;Dbxref=GenBank:WP_001044607.1;Name=WP_001044607.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044602.1;locus_tag=C9E94_RS21585;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_001044607.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	384810	386345	.	-	.	ID=gene-C9E94_RS21590;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=C9E94_RS21590;old_locus_tag=C9E94_22140
NZ_PYJR01000133.1	Protein Homology	CDS	384810	386345	.	-	0	ID=cds-WP_001562609.1;Parent=gene-C9E94_RS21590;Dbxref=GenBank:WP_001562609.1;Name=WP_001562609.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460121.1;locus_tag=C9E94_RS21590;product=glucans biosynthesis protein MdoG;protein_id=WP_001562609.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	386617	387771	.	+	.	ID=gene-C9E94_RS21600;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=C9E94_RS21600;old_locus_tag=C9E94_22145
NZ_PYJR01000133.1	Protein Homology	CDS	386617	387771	.	+	0	ID=cds-WP_000100066.1;Parent=gene-C9E94_RS21600;Dbxref=GenBank:WP_000100066.1;Name=WP_000100066.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460120.1;locus_tag=C9E94_RS21600;product=glucans biosynthesis protein MdoC;protein_id=WP_000100066.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	387788	389275	.	-	.	ID=gene-C9E94_RS21605;Name=C9E94_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21605;old_locus_tag=C9E94_22150
NZ_PYJR01000133.1	Protein Homology	CDS	387788	389275	.	-	0	ID=cds-WP_000976323.1;Parent=gene-C9E94_RS21605;Dbxref=GenBank:WP_000976323.1;Name=WP_000976323.1;Ontology_term=GO:0032049,GO:0090483;gbkey=CDS;go_function=phosphatidylglycerol-phosphatidylethanolamine phosphatidyltransferase activity|0090483||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=C9E94_RS21605;product=phospholipase D family protein;protein_id=WP_000976323.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	389211	389750	.	-	.	ID=gene-C9E94_RS21610;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=C9E94_RS21610;old_locus_tag=C9E94_22155
NZ_PYJR01000133.1	Protein Homology	CDS	389211	389750	.	-	0	ID=cds-WP_000203941.1;Parent=gene-C9E94_RS21610;Dbxref=GenBank:WP_000203941.1;Name=WP_000203941.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460118.1;locus_tag=C9E94_RS21610;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_000203941.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	389839	390159	.	-	.	ID=gene-C9E94_RS21615;Name=C9E94_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21615;old_locus_tag=C9E94_22160
NZ_PYJR01000133.1	Protein Homology	CDS	389839	390159	.	-	0	ID=cds-WP_023993495.1;Parent=gene-C9E94_RS21615;Dbxref=GenBank:WP_023993495.1;Name=WP_023993495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460117.1;locus_tag=C9E94_RS21615;product=type 1 fimbrial protein;protein_id=WP_023993495.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	390290	390616	.	-	.	ID=gene-C9E94_RS21620;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=C9E94_RS21620;old_locus_tag=C9E94_22165
NZ_PYJR01000133.1	Protein Homology	CDS	390290	390616	.	-	0	ID=cds-WP_000557256.1;Parent=gene-C9E94_RS21620;Dbxref=GenBank:WP_000557256.1;Name=WP_000557256.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460116.1;locus_tag=C9E94_RS21620;product=curli assembly chaperone CsgC;protein_id=WP_000557256.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	390678	391133	.	-	.	ID=gene-C9E94_RS21625;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=C9E94_RS21625;old_locus_tag=C9E94_22170
NZ_PYJR01000133.1	Protein Homology	CDS	390678	391133	.	-	0	ID=cds-WP_000771416.1;Parent=gene-C9E94_RS21625;Dbxref=GenBank:WP_000771416.1;Name=WP_000771416.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460115.1;locus_tag=C9E94_RS21625;product=curli major subunit CsgA;protein_id=WP_000771416.1;transl_table=11
NZ_PYJR01000133.1	RefSeq	gene	391175	391630	.	-	.	ID=gene-C9E94_RS21630;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=C9E94_RS21630;old_locus_tag=C9E94_22175
NZ_PYJR01000133.1	Protein Homology	CDS	391175	391630	.	-	0	ID=cds-WP_000791655.1;Parent=gene-C9E94_RS21630;Dbxref=GenBank:WP_000791655.1;Name=WP_000791655.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460114.1;locus_tag=C9E94_RS21630;product=curli minor subunit CsgB;protein_id=WP_000791655.1;transl_table=11
##sequence-region NZ_PYJR01000037.1 1 74067
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000037.1	RefSeq	region	1	74067	.	+	.	ID=NZ_PYJR01000037.1:1..74067;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000037.1	RefSeq	gene	361	813	.	-	.	ID=gene-C9E94_RS03895;Name=C9E94_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03895;old_locus_tag=C9E94_03980
NZ_PYJR01000037.1	Protein Homology	CDS	361	813	.	-	0	ID=cds-WP_000612179.1;Parent=gene-C9E94_RS03895;Dbxref=GenBank:WP_000612179.1;Name=WP_000612179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461789.1;locus_tag=C9E94_RS03895;product=type III secretion system effector protein OrgC;protein_id=WP_000612179.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	810	1490	.	-	.	ID=gene-C9E94_RS03900;Name=orgB;gbkey=Gene;gene=orgB;gene_biotype=protein_coding;locus_tag=C9E94_RS03900;old_locus_tag=C9E94_03985
NZ_PYJR01000037.1	Protein Homology	CDS	810	1490	.	-	0	ID=cds-WP_000916654.1;Parent=gene-C9E94_RS03900;Dbxref=GenBank:WP_000916654.1;Name=WP_000916654.1;gbkey=CDS;gene=orgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461790.1;locus_tag=C9E94_RS03900;product=type III secretion system linker protein OrgB;protein_id=WP_000916654.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	1447	2046	.	-	.	ID=gene-C9E94_RS03905;Name=orgA;gbkey=Gene;gene=orgA;gene_biotype=protein_coding;locus_tag=C9E94_RS03905;old_locus_tag=C9E94_03990
NZ_PYJR01000037.1	Protein Homology	CDS	1447	2046	.	-	0	ID=cds-WP_001574876.1;Parent=gene-C9E94_RS03905;Dbxref=GenBank:WP_001574876.1;Name=WP_001574876.1;gbkey=CDS;gene=orgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461791.1;locus_tag=C9E94_RS03905;product=oxygen-regulated invasion protein OrgA;protein_id=WP_001574876.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	2018	2776	.	-	.	ID=gene-C9E94_RS03910;Name=prgK;gbkey=Gene;gene=prgK;gene_biotype=protein_coding;locus_tag=C9E94_RS03910;old_locus_tag=C9E94_03995
NZ_PYJR01000037.1	Protein Homology	CDS	2018	2776	.	-	0	ID=cds-WP_000621238.1;Parent=gene-C9E94_RS03910;Dbxref=GenBank:WP_000621238.1;Name=WP_000621238.1;gbkey=CDS;gene=prgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461792.1;locus_tag=C9E94_RS03910;product=type III secretion system inner membrane ring lipoprotein PrgK;protein_id=WP_000621238.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	2773	3078	.	-	.	ID=gene-C9E94_RS03915;Name=prgJ;gbkey=Gene;gene=prgJ;gene_biotype=protein_coding;locus_tag=C9E94_RS03915;old_locus_tag=C9E94_04000
NZ_PYJR01000037.1	Protein Homology	CDS	2773	3078	.	-	0	ID=cds-WP_000020431.1;Parent=gene-C9E94_RS03915;Dbxref=GenBank:WP_000020431.1;Name=WP_000020431.1;gbkey=CDS;gene=prgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461793.1;locus_tag=C9E94_RS03915;product=type III secretion system inner rod protein PrgJ;protein_id=WP_000020431.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	3097	3339	.	-	.	ID=gene-C9E94_RS03920;Name=prgI;gbkey=Gene;gene=prgI;gene_biotype=protein_coding;locus_tag=C9E94_RS03920;old_locus_tag=C9E94_04005
NZ_PYJR01000037.1	Protein Homology	CDS	3097	3339	.	-	0	ID=cds-WP_000235228.1;Parent=gene-C9E94_RS03920;Dbxref=GenBank:WP_000235228.1;Name=WP_000235228.1;gbkey=CDS;gene=prgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461794.1;locus_tag=C9E94_RS03920;product=type III secretion system needle filament protein PrgI;protein_id=WP_000235228.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	3364	4542	.	-	.	ID=gene-C9E94_RS03925;Name=prgH;gbkey=Gene;gene=prgH;gene_biotype=protein_coding;locus_tag=C9E94_RS03925;old_locus_tag=C9E94_04010
NZ_PYJR01000037.1	Protein Homology	CDS	3364	4542	.	-	0	ID=cds-WP_000450192.1;Parent=gene-C9E94_RS03925;Dbxref=GenBank:WP_000450192.1;Name=WP_000450192.1;gbkey=CDS;gene=prgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461795.1;locus_tag=C9E94_RS03925;product=type III secretion system inner membrane ring protein PrgH;protein_id=WP_000450192.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	4858	5787	.	+	.	ID=gene-C9E94_RS03930;Name=hilD;gbkey=Gene;gene=hilD;gene_biotype=protein_coding;locus_tag=C9E94_RS03930;old_locus_tag=C9E94_04015
NZ_PYJR01000037.1	Protein Homology	CDS	4858	5787	.	+	0	ID=cds-WP_000432700.1;Parent=gene-C9E94_RS03930;Dbxref=GenBank:WP_000432700.1;Name=WP_000432700.1;gbkey=CDS;gene=hilD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461796.1;locus_tag=C9E94_RS03930;product=transcriptional regulator HilD;protein_id=WP_000432700.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	6878	8539	.	+	.	ID=gene-C9E94_RS03935;Name=hilA;gbkey=Gene;gene=hilA;gene_biotype=protein_coding;locus_tag=C9E94_RS03935;old_locus_tag=C9E94_04020
NZ_PYJR01000037.1	Protein Homology	CDS	6878	8539	.	+	0	ID=cds-WP_135400827.1;Parent=gene-C9E94_RS03935;Dbxref=GenBank:WP_135400827.1;Name=WP_135400827.1;gbkey=CDS;gene=hilA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461797.1;locus_tag=C9E94_RS03935;product=transcriptional regulator HilA;protein_id=WP_135400827.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	8557	9039	.	+	.	ID=gene-C9E94_RS03940;Name=iagB;gbkey=Gene;gene=iagB;gene_biotype=protein_coding;locus_tag=C9E94_RS03940;old_locus_tag=C9E94_04025
NZ_PYJR01000037.1	Protein Homology	CDS	8557	9039	.	+	0	ID=cds-WP_000558928.1;Parent=gene-C9E94_RS03940;Dbxref=GenBank:WP_000558928.1;Name=WP_000558928.1;gbkey=CDS;gene=iagB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461798.1;locus_tag=C9E94_RS03940;product=SPI-1 type III secretion system invasion protein IagB;protein_id=WP_000558928.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	9093	10724	.	-	.	ID=gene-C9E94_RS03945;Name=sptP;gbkey=Gene;gene=sptP;gene_biotype=protein_coding;locus_tag=C9E94_RS03945;old_locus_tag=C9E94_04030
NZ_PYJR01000037.1	Protein Homology	CDS	9093	10724	.	-	0	ID=cds-WP_135400828.1;Parent=gene-C9E94_RS03945;Dbxref=GenBank:WP_135400828.1;Name=WP_135400828.1;gbkey=CDS;gene=sptP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461799.1;locus_tag=C9E94_RS03945;product=SPI-1 type III secretion system effector GTPase-activating protein SptP;protein_id=WP_135400828.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	10711	11103	.	-	.	ID=gene-C9E94_RS03950;Name=sicP;gbkey=Gene;gene=sicP;gene_biotype=protein_coding;locus_tag=C9E94_RS03950;old_locus_tag=C9E94_04035
NZ_PYJR01000037.1	Protein Homology	CDS	10711	11103	.	-	0	ID=cds-WP_001147851.1;Parent=gene-C9E94_RS03950;Dbxref=GenBank:WP_001147851.1;Name=WP_001147851.1;gbkey=CDS;gene=sicP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461800.1;locus_tag=C9E94_RS03950;product=chaperone SicP;protein_id=WP_001147851.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	11130	11390	.	-	.	ID=gene-C9E94_RS03955;Name=C9E94_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03955;old_locus_tag=C9E94_04040
NZ_PYJR01000037.1	Protein Homology	CDS	11130	11390	.	-	0	ID=cds-WP_000692253.1;Parent=gene-C9E94_RS03955;Dbxref=GenBank:WP_000692253.1;Name=WP_000692253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449260.1;locus_tag=C9E94_RS03955;product=hypothetical protein;protein_id=WP_000692253.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	11434	11682	.	-	.	ID=gene-C9E94_RS03960;Name=C9E94_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03960;old_locus_tag=C9E94_04045
NZ_PYJR01000037.1	Protein Homology	CDS	11434	11682	.	-	0	ID=cds-WP_001055579.1;Parent=gene-C9E94_RS03960;Dbxref=GenBank:WP_001055579.1;Name=WP_001055579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461802.1;locus_tag=C9E94_RS03960;product=acyl carrier protein;protein_id=WP_001055579.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	11701	13758	.	-	.	ID=gene-C9E94_RS03965;Name=sipA;gbkey=Gene;gene=sipA;gene_biotype=protein_coding;locus_tag=C9E94_RS03965;old_locus_tag=C9E94_04050
NZ_PYJR01000037.1	Protein Homology	CDS	11701	13758	.	-	0	ID=cds-WP_000258820.1;Parent=gene-C9E94_RS03965;Dbxref=GenBank:WP_000258820.1;Name=WP_000258820.1;gbkey=CDS;gene=sipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461803.1;locus_tag=C9E94_RS03965;product=SPI-1 type III secretion system effector SipA;protein_id=WP_000258820.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	13777	14808	.	-	.	ID=gene-C9E94_RS03970;Name=sipD;gbkey=Gene;gene=sipD;gene_biotype=protein_coding;locus_tag=C9E94_RS03970;old_locus_tag=C9E94_04055
NZ_PYJR01000037.1	Protein Homology	CDS	13777	14808	.	-	0	ID=cds-WP_000932249.1;Parent=gene-C9E94_RS03970;Dbxref=GenBank:WP_000932249.1;Name=WP_000932249.1;gbkey=CDS;gene=sipD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461804.1;locus_tag=C9E94_RS03970;product=SPI-1 type III secretion system needle tip complex protein SipD;protein_id=WP_000932249.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	14879	16108	.	-	.	ID=gene-C9E94_RS03975;Name=sipC;gbkey=Gene;gene=sipC;gene_biotype=protein_coding;locus_tag=C9E94_RS03975;old_locus_tag=C9E94_04060
NZ_PYJR01000037.1	Protein Homology	CDS	14879	16108	.	-	0	ID=cds-WP_000909019.1;Parent=gene-C9E94_RS03975;Dbxref=GenBank:WP_000909019.1;Name=WP_000909019.1;gbkey=CDS;gene=sipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461805.1;locus_tag=C9E94_RS03975;product=SPI-1 type III secretion system needle tip complex protein SipC;protein_id=WP_000909019.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	16136	17917	.	-	.	ID=gene-C9E94_RS03980;Name=sipB;gbkey=Gene;gene=sipB;gene_biotype=protein_coding;locus_tag=C9E94_RS03980;old_locus_tag=C9E94_04065
NZ_PYJR01000037.1	Protein Homology	CDS	16136	17917	.	-	0	ID=cds-WP_000245782.1;Parent=gene-C9E94_RS03980;Dbxref=GenBank:WP_000245782.1;Name=WP_000245782.1;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461806.1;locus_tag=C9E94_RS03980;product=SPI-1 type III secretion system needle tip complex protein SipB;protein_id=WP_000245782.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	17920	18417	.	-	.	ID=gene-C9E94_RS03985;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=C9E94_RS03985;old_locus_tag=C9E94_04070
NZ_PYJR01000037.1	Protein Homology	CDS	17920	18417	.	-	0	ID=cds-WP_000386309.1;Parent=gene-C9E94_RS03985;Dbxref=GenBank:WP_000386309.1;Name=WP_000386309.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461807.1;locus_tag=C9E94_RS03985;product=SycD/LcrH family type III secretion system chaperone SicA;protein_id=WP_000386309.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	18555	19625	.	-	.	ID=gene-C9E94_RS03990;Name=spaS;gbkey=Gene;gene=spaS;gene_biotype=protein_coding;locus_tag=C9E94_RS03990;old_locus_tag=C9E94_04075
NZ_PYJR01000037.1	Protein Homology	CDS	18555	19625	.	-	0	ID=cds-WP_000097719.1;Parent=gene-C9E94_RS03990;Dbxref=GenBank:WP_000097719.1;Name=WP_000097719.1;gbkey=CDS;gene=spaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461808.1;locus_tag=C9E94_RS03990;product=SPI-1 type III secretion system export apparatus protein SpaS;protein_id=WP_000097719.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	19612	20403	.	-	.	ID=gene-C9E94_RS03995;Name=spaR;gbkey=Gene;gene=spaR;gene_biotype=protein_coding;locus_tag=C9E94_RS03995;old_locus_tag=C9E94_04080
NZ_PYJR01000037.1	Protein Homology	CDS	19612	20403	.	-	0	ID=cds-WP_000498965.1;Parent=gene-C9E94_RS03995;Dbxref=GenBank:WP_000498965.1;Name=WP_000498965.1;gbkey=CDS;gene=spaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461809.1;locus_tag=C9E94_RS03995;product=SPI-1 type III secretion system export apparatus protein SpaR;protein_id=WP_000498965.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	20407	20667	.	-	.	ID=gene-C9E94_RS04000;Name=spaQ;gbkey=Gene;gene=spaQ;gene_biotype=protein_coding;locus_tag=C9E94_RS04000;old_locus_tag=C9E94_04085
NZ_PYJR01000037.1	Protein Homology	CDS	20407	20667	.	-	0	ID=cds-WP_000342503.1;Parent=gene-C9E94_RS04000;Dbxref=GenBank:WP_000342503.1;Name=WP_000342503.1;gbkey=CDS;gene=spaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461810.1;locus_tag=C9E94_RS04000;product=SPI-1 type III secretion system export apparatus protein SpaQ;protein_id=WP_000342503.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	20693	21367	.	-	.	ID=gene-C9E94_RS04005;Name=spaP;gbkey=Gene;gene=spaP;gene_biotype=protein_coding;locus_tag=C9E94_RS04005;old_locus_tag=C9E94_04090
NZ_PYJR01000037.1	Protein Homology	CDS	20693	21367	.	-	0	ID=cds-WP_000526016.1;Parent=gene-C9E94_RS04005;Dbxref=GenBank:WP_000526016.1;Name=WP_000526016.1;gbkey=CDS;gene=spaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461811.1;locus_tag=C9E94_RS04005;product=SPI-1 type III secretion system export apparatus protein SpaP;protein_id=WP_000526016.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	21357	22268	.	-	.	ID=gene-C9E94_RS04010;Name=spaO;gbkey=Gene;gene=spaO;gene_biotype=protein_coding;locus_tag=C9E94_RS04010;old_locus_tag=C9E94_04095
NZ_PYJR01000037.1	Protein Homology	CDS	21357	22268	.	-	0	ID=cds-WP_000058730.1;Parent=gene-C9E94_RS04010;Dbxref=GenBank:WP_000058730.1;Name=WP_000058730.1;gbkey=CDS;gene=spaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461812.1;locus_tag=C9E94_RS04010;product=SPI-1 type III secretion system protein SpaO;protein_id=WP_000058730.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	22268	23278	.	-	.	ID=gene-C9E94_RS04015;Name=spaN;gbkey=Gene;gene=spaN;gene_biotype=protein_coding;locus_tag=C9E94_RS04015;old_locus_tag=C9E94_04100
NZ_PYJR01000037.1	Protein Homology	CDS	22268	23278	.	-	0	ID=cds-WP_000503092.1;Parent=gene-C9E94_RS04015;Dbxref=GenBank:WP_000503092.1;Name=WP_000503092.1;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461813.1;locus_tag=C9E94_RS04015;product=SPI-1 type III secretion system protein SpaN;protein_id=WP_000503092.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	23278	23721	.	-	.	ID=gene-C9E94_RS04020;Name=spaM;gbkey=Gene;gene=spaM;gene_biotype=protein_coding;locus_tag=C9E94_RS04020;old_locus_tag=C9E94_04105
NZ_PYJR01000037.1	Protein Homology	CDS	23278	23721	.	-	0	ID=cds-WP_000555884.1;Parent=gene-C9E94_RS04020;Dbxref=GenBank:WP_000555884.1;Name=WP_000555884.1;gbkey=CDS;gene=spaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461814.1;locus_tag=C9E94_RS04020;product=SPI-1 type III secretion system protein SpaM;protein_id=WP_000555884.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	23699	24994	.	-	.	ID=gene-C9E94_RS04025;Name=invC;gbkey=Gene;gene=invC;gene_biotype=protein_coding;locus_tag=C9E94_RS04025;old_locus_tag=C9E94_04110
NZ_PYJR01000037.1	Protein Homology	CDS	23699	24994	.	-	0	ID=cds-WP_000856766.1;Parent=gene-C9E94_RS04025;Dbxref=GenBank:WP_000856766.1;Name=WP_000856766.1;gbkey=CDS;gene=invC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461815.1;locus_tag=C9E94_RS04025;product=SctN family type III secretion system ATPase InvC;protein_id=WP_000856766.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	24991	25398	.	-	.	ID=gene-C9E94_RS04030;Name=spaK;gbkey=Gene;gene=spaK;gene_biotype=protein_coding;locus_tag=C9E94_RS04030;old_locus_tag=C9E94_04115
NZ_PYJR01000037.1	Protein Homology	CDS	24991	25398	.	-	0	ID=cds-WP_001164066.1;Parent=gene-C9E94_RS04030;Dbxref=GenBank:WP_001164066.1;Name=WP_001164066.1;gbkey=CDS;gene=spaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461816.1;locus_tag=C9E94_RS04030;product=SPI-1 type III secretion system chaperone SpaK;protein_id=WP_001164066.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	25422	27479	.	-	.	ID=gene-C9E94_RS04035;Name=invA;gbkey=Gene;gene=invA;gene_biotype=protein_coding;locus_tag=C9E94_RS04035;old_locus_tag=C9E94_04120
NZ_PYJR01000037.1	Protein Homology	CDS	25422	27479	.	-	0	ID=cds-WP_000927219.1;Parent=gene-C9E94_RS04035;Dbxref=GenBank:WP_000927219.1;Name=WP_000927219.1;gbkey=CDS;gene=invA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461817.1;locus_tag=C9E94_RS04035;product=type III secretion system export apparatus protein InvA;protein_id=WP_000927219.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	27504	28622	.	-	.	ID=gene-C9E94_RS04040;Name=invE;gbkey=Gene;gene=invE;gene_biotype=protein_coding;locus_tag=C9E94_RS04040;old_locus_tag=C9E94_04125
NZ_PYJR01000037.1	Protein Homology	CDS	27504	28622	.	-	0	ID=cds-WP_000612171.1;Parent=gene-C9E94_RS04040;Dbxref=GenBank:WP_000612171.1;Name=WP_000612171.1;gbkey=CDS;gene=invE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461818.1;locus_tag=C9E94_RS04040;product=type III secretion system gatekeeper InvE;protein_id=WP_000612171.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	28619	30307	.	-	.	ID=gene-C9E94_RS04045;Name=invG;gbkey=Gene;gene=invG;gene_biotype=protein_coding;locus_tag=C9E94_RS04045;old_locus_tag=C9E94_04130
NZ_PYJR01000037.1	Protein Homology	CDS	28619	30307	.	-	0	ID=cds-WP_000848101.1;Parent=gene-C9E94_RS04045;Dbxref=GenBank:WP_000848101.1;Name=WP_000848101.1;gbkey=CDS;gene=invG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461819.1;locus_tag=C9E94_RS04045;product=type III secretion system outer membrane ring protein InvG;protein_id=WP_000848101.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	30304	30954	.	-	.	ID=gene-C9E94_RS04050;Name=invF;gbkey=Gene;gene=invF;gene_biotype=protein_coding;locus_tag=C9E94_RS04050;old_locus_tag=C9E94_04135
NZ_PYJR01000037.1	Protein Homology	CDS	30304	30954	.	-	0	ID=cds-WP_001674874.1;Parent=gene-C9E94_RS04050;Dbxref=GenBank:WP_001674874.1;Name=WP_001674874.1;gbkey=CDS;gene=invF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461820.1;locus_tag=C9E94_RS04050;product=type III secretion system transcriptional activator InvF;protein_id=WP_001674874.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	31410	31853	.	+	.	ID=gene-C9E94_RS04055;Name=invH;gbkey=Gene;gene=invH;gene_biotype=protein_coding;locus_tag=C9E94_RS04055;old_locus_tag=C9E94_04140
NZ_PYJR01000037.1	Protein Homology	CDS	31410	31853	.	+	0	ID=cds-WP_000715096.1;Parent=gene-C9E94_RS04055;Dbxref=GenBank:WP_000715096.1;Name=WP_000715096.1;gbkey=CDS;gene=invH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461821.1;locus_tag=C9E94_RS04055;product=SPI-1 type III secretion system invasion lipoprotein InvH;protein_id=WP_000715096.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	32285	32734	.	+	.	ID=gene-C9E94_RS04060;Name=C9E94_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04060;old_locus_tag=C9E94_04145
NZ_PYJR01000037.1	Protein Homology	CDS	32285	32734	.	+	0	ID=cds-WP_000381612.1;Parent=gene-C9E94_RS04060;Dbxref=GenBank:WP_000381612.1;Name=WP_000381612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461822.1;locus_tag=C9E94_RS04060;product=STM2901 family protein;protein_id=WP_000381612.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	32719	33066	.	+	.	ID=gene-C9E94_RS04065;Name=C9E94_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04065;old_locus_tag=C9E94_04150
NZ_PYJR01000037.1	Protein Homology	CDS	32719	33066	.	+	0	ID=cds-WP_001669174.1;Parent=gene-C9E94_RS04065;Dbxref=GenBank:WP_001669174.1;Name=WP_001669174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461823.1;locus_tag=C9E94_RS04065;product=DUF1493 family protein;protein_id=WP_001669174.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	33339	33665	.	-	.	ID=gene-C9E94_RS04070;Name=C9E94_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04070;old_locus_tag=C9E94_04155
NZ_PYJR01000037.1	Protein Homology	CDS	33339	33665	.	-	0	ID=cds-WP_000393300.1;Parent=gene-C9E94_RS04070;Dbxref=GenBank:WP_000393300.1;Name=WP_000393300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461824.1;locus_tag=C9E94_RS04070;product=hypothetical protein;protein_id=WP_000393300.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	pseudogene	33906	34084	.	+	.	ID=gene-C9E94_RS04075;Name=C9E94_RS04075;end_range=34084,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS04075;old_locus_tag=C9E94_04160;partial=true;pseudo=true
NZ_PYJR01000037.1	Protein Homology	CDS	33906	34084	.	+	0	ID=cds-C9E94_RS04075;Parent=gene-C9E94_RS04075;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=34084,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612101.1;locus_tag=C9E94_RS04075;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	34354	34644	.	+	.	ID=gene-C9E94_RS04080;Name=C9E94_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04080;old_locus_tag=C9E94_04165
NZ_PYJR01000037.1	Protein Homology	CDS	34354	34644	.	+	0	ID=cds-WP_000855694.1;Parent=gene-C9E94_RS04080;Dbxref=GenBank:WP_000855694.1;Name=WP_000855694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461825.1;locus_tag=C9E94_RS04080;product=type II toxin-antitoxin system TacA family antitoxin;protein_id=WP_000855694.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	34641	35168	.	+	.	ID=gene-C9E94_RS04085;Name=C9E94_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04085;old_locus_tag=C9E94_04170
NZ_PYJR01000037.1	Protein Homology	CDS	34641	35168	.	+	0	ID=cds-WP_000971649.1;Parent=gene-C9E94_RS04085;Dbxref=GenBank:WP_000971649.1;Name=WP_000971649.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461826.1;locus_tag=C9E94_RS04085;product=GNAT family N-acetyltransferase;protein_id=WP_000971649.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	pseudogene	35241	35656	.	-	.	ID=gene-C9E94_RS04090;Name=C9E94_RS04090;end_range=35656,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS04090;old_locus_tag=C9E94_04175;partial=true;pseudo=true
NZ_PYJR01000037.1	Protein Homology	CDS	35241	35656	.	-	0	ID=cds-C9E94_RS04090;Parent=gene-C9E94_RS04090;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=35656,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1;locus_tag=C9E94_RS04090;partial=true;product=transposase;pseudo=true;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	35883	36539	.	+	.	ID=gene-C9E94_RS04095;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=C9E94_RS04095;old_locus_tag=C9E94_04180
NZ_PYJR01000037.1	Protein Homology	CDS	35883	36539	.	+	0	ID=cds-WP_135400829.1;Parent=gene-C9E94_RS04095;Dbxref=GenBank:WP_135400829.1;Name=WP_135400829.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461828.1;locus_tag=C9E94_RS04095;product=protein-serine/threonine phosphatase;protein_id=WP_135400829.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	36711	37232	.	-	.	ID=gene-C9E94_RS04100;Name=C9E94_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04100;old_locus_tag=C9E94_04185
NZ_PYJR01000037.1	Protein Homology	CDS	36711	37232	.	-	0	ID=cds-WP_000858988.1;Parent=gene-C9E94_RS04100;Dbxref=GenBank:WP_000858988.1;Name=WP_000858988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=C9E94_RS04100;product=hypothetical protein;protein_id=WP_000858988.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	37391	39958	.	+	.	ID=gene-C9E94_RS04105;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=C9E94_RS04105;old_locus_tag=C9E94_04190
NZ_PYJR01000037.1	Protein Homology	CDS	37391	39958	.	+	0	ID=cds-WP_001005807.1;Parent=gene-C9E94_RS04105;Dbxref=GenBank:WP_001005807.1;Name=WP_001005807.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461830.1;locus_tag=C9E94_RS04105;product=DNA mismatch repair protein MutS;protein_id=WP_001005807.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	40014	40394	.	-	.	ID=gene-C9E94_RS04110;Name=C9E94_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04110;old_locus_tag=C9E94_04195
NZ_PYJR01000037.1	Protein Homology	CDS	40014	40394	.	-	0	ID=cds-WP_001070479.1;Parent=gene-C9E94_RS04110;Dbxref=GenBank:WP_001070479.1;Name=WP_001070479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=C9E94_RS04110;product=DUF4440 domain-containing protein;protein_id=WP_001070479.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	40391	41599	.	-	.	ID=gene-C9E94_RS04115;Name=C9E94_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04115;old_locus_tag=C9E94_04200
NZ_PYJR01000037.1	Protein Homology	CDS	40391	41599	.	-	0	ID=cds-WP_000222406.1;Parent=gene-C9E94_RS04115;Dbxref=GenBank:WP_000222406.1;Name=WP_000222406.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461832.1;locus_tag=C9E94_RS04115;product=MFS transporter;protein_id=WP_000222406.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	41687	42619	.	+	.	ID=gene-C9E94_RS04120;Name=C9E94_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04120;old_locus_tag=C9E94_04205
NZ_PYJR01000037.1	Protein Homology	CDS	41687	42619	.	+	0	ID=cds-WP_000216297.1;Parent=gene-C9E94_RS04120;Dbxref=GenBank:WP_000216297.1;Name=WP_000216297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461833.1;locus_tag=C9E94_RS04120;product=LysR family transcriptional regulator;protein_id=WP_000216297.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	42661	44157	.	-	.	ID=gene-C9E94_RS04125;Name=C9E94_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04125;old_locus_tag=C9E94_04210
NZ_PYJR01000037.1	Protein Homology	CDS	42661	44157	.	-	0	ID=cds-WP_000202725.1;Parent=gene-C9E94_RS04125;Dbxref=GenBank:WP_000202725.1;Name=WP_000202725.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461834.1;locus_tag=C9E94_RS04125;product=GntP family permease;protein_id=WP_000202725.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	44154	45104	.	-	.	ID=gene-C9E94_RS04130;Name=denD;gbkey=Gene;gene=denD;gene_biotype=protein_coding;locus_tag=C9E94_RS04130;old_locus_tag=C9E94_04215
NZ_PYJR01000037.1	Protein Homology	CDS	44154	45104	.	-	0	ID=cds-WP_001165731.1;Parent=gene-C9E94_RS04130;Dbxref=GenBank:WP_001165731.1;Name=WP_001165731.1;Ontology_term=GO:0005975,GO:0016491;gbkey=CDS;gene=denD;go_function=oxidoreductase activity|0016491||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461835.1;locus_tag=C9E94_RS04130;product=D-erythronate dehydrogenase;protein_id=WP_001165731.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	45144	45920	.	-	.	ID=gene-C9E94_RS04135;Name=C9E94_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04135;old_locus_tag=C9E94_04220
NZ_PYJR01000037.1	Protein Homology	CDS	45144	45920	.	-	0	ID=cds-WP_001136887.1;Parent=gene-C9E94_RS04135;Dbxref=GenBank:WP_001136887.1;Name=WP_001136887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461836.1;locus_tag=C9E94_RS04135;product=HPr family phosphocarrier protein;protein_id=WP_001136887.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	45925	46563	.	-	.	ID=gene-C9E94_RS04140;Name=otnC;gbkey=Gene;gene=otnC;gene_biotype=protein_coding;locus_tag=C9E94_RS04140;old_locus_tag=C9E94_04225
NZ_PYJR01000037.1	Protein Homology	CDS	45925	46563	.	-	0	ID=cds-WP_000153636.1;Parent=gene-C9E94_RS04140;Dbxref=GenBank:WP_000153636.1;Name=WP_000153636.1;Ontology_term=GO:0005996,GO:0016829;gbkey=CDS;gene=otnC;go_function=lyase activity|0016829||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461837.1;locus_tag=C9E94_RS04140;product=3-oxo-tetronate 4-phosphate decarboxylase;protein_id=WP_000153636.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	46560	47822	.	-	.	ID=gene-C9E94_RS04145;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=C9E94_RS04145;old_locus_tag=C9E94_04230
NZ_PYJR01000037.1	Protein Homology	CDS	46560	47822	.	-	0	ID=cds-WP_023250575.1;Parent=gene-C9E94_RS04145;Dbxref=GenBank:WP_023250575.1;Name=WP_023250575.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461838.1;locus_tag=C9E94_RS04145;product=3-oxo-tetronate kinase;protein_id=WP_023250575.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	47816	48739	.	-	.	ID=gene-C9E94_RS04150;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=C9E94_RS04150;old_locus_tag=C9E94_04235
NZ_PYJR01000037.1	Protein Homology	CDS	47816	48739	.	-	0	ID=cds-WP_000206958.1;Parent=gene-C9E94_RS04150;Dbxref=GenBank:WP_000206958.1;Name=WP_000206958.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461839.1;locus_tag=C9E94_RS04150;product=L-threonate dehydrogenase;protein_id=WP_000206958.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	48936	49700	.	+	.	ID=gene-C9E94_RS04155;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=C9E94_RS04155;old_locus_tag=C9E94_04240
NZ_PYJR01000037.1	Protein Homology	CDS	48936	49700	.	+	0	ID=cds-WP_000613180.1;Parent=gene-C9E94_RS04155;Dbxref=GenBank:WP_000613180.1;Name=WP_000613180.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461840.1;locus_tag=C9E94_RS04155;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_000613180.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	49719	50123	.	-	.	ID=gene-C9E94_RS04160;Name=C9E94_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04160;old_locus_tag=C9E94_04245
NZ_PYJR01000037.1	Protein Homology	CDS	49719	50123	.	-	0	ID=cds-WP_000423338.1;Parent=gene-C9E94_RS04160;Dbxref=GenBank:WP_000423338.1;Name=WP_000423338.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461841.1;locus_tag=C9E94_RS04160;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_000423338.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	50294	50887	.	+	.	ID=gene-C9E94_RS04165;Name=C9E94_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04165;old_locus_tag=C9E94_04250
NZ_PYJR01000037.1	Protein Homology	CDS	50294	50887	.	+	0	ID=cds-WP_135400830.1;Parent=gene-C9E94_RS04165;Dbxref=GenBank:WP_135400830.1;Name=WP_135400830.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461842.1;locus_tag=C9E94_RS04165;product=non-oxidative hydroxyarylic acid decarboxylases subunit B;protein_id=WP_135400830.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	50887	52314	.	+	.	ID=gene-C9E94_RS04170;Name=C9E94_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04170;old_locus_tag=C9E94_04255
NZ_PYJR01000037.1	Protein Homology	CDS	50887	52314	.	+	0	ID=cds-WP_000863168.1;Parent=gene-C9E94_RS04170;Dbxref=GenBank:WP_000863168.1;Name=WP_000863168.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461843.1;locus_tag=C9E94_RS04170;product=non-oxidative hydroxyarylic acid decarboxylases subunit C;protein_id=WP_000863168.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	52325	52561	.	+	.	ID=gene-C9E94_RS04175;Name=C9E94_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04175;old_locus_tag=C9E94_04260
NZ_PYJR01000037.1	Protein Homology	CDS	52325	52561	.	+	0	ID=cds-WP_000562964.1;Parent=gene-C9E94_RS04175;Dbxref=GenBank:WP_000562964.1;Name=WP_000562964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461844.1;locus_tag=C9E94_RS04175;product=non-oxidative hydroxyarylic acid decarboxylases subunit D;protein_id=WP_000562964.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	52606	53598	.	-	.	ID=gene-C9E94_RS04180;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=C9E94_RS04180;old_locus_tag=C9E94_04265
NZ_PYJR01000037.1	Protein Homology	CDS	52606	53598	.	-	0	ID=cds-WP_000081498.1;Parent=gene-C9E94_RS04180;Dbxref=GenBank:WP_000081498.1;Name=WP_000081498.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=C9E94_RS04180;product=RNA polymerase sigma factor RpoS;protein_id=WP_000081498.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	53661	54743	.	-	.	ID=gene-C9E94_RS04185;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=C9E94_RS04185;old_locus_tag=C9E94_04270
NZ_PYJR01000037.1	Protein Homology	CDS	53661	54743	.	-	0	ID=cds-WP_223149274.1;Parent=gene-C9E94_RS04185;Dbxref=GenBank:WP_223149274.1;Name=WP_223149274.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461846.1;locus_tag=C9E94_RS04185;product=murein hydrolase activator NlpD;protein_id=WP_223149274.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	54673	54831	.	+	.	ID=gene-C9E94_RS23575;Name=C9E94_RS23575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23575
NZ_PYJR01000037.1	Protein Homology	CDS	54673	54831	.	+	0	ID=cds-WP_223148970.1;Parent=gene-C9E94_RS23575;Dbxref=GenBank:WP_223148970.1;Name=WP_223148970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541719.1;locus_tag=C9E94_RS23575;product=peptidase;protein_id=WP_223148970.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	54970	55596	.	-	.	ID=gene-C9E94_RS04190;Name=C9E94_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04190;old_locus_tag=C9E94_04275
NZ_PYJR01000037.1	Protein Homology	CDS	54970	55596	.	-	0	ID=cds-WP_000253545.1;Parent=gene-C9E94_RS04190;Dbxref=GenBank:WP_000253545.1;Name=WP_000253545.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=C9E94_RS04190;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_000253545.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	55590	56351	.	-	.	ID=gene-C9E94_RS04195;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=C9E94_RS04195;old_locus_tag=C9E94_04280
NZ_PYJR01000037.1	Protein Homology	CDS	55590	56351	.	-	0	ID=cds-WP_001221538.1;Parent=gene-C9E94_RS04195;Dbxref=GenBank:WP_001221538.1;Name=WP_001221538.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461848.1;locus_tag=C9E94_RS04195;product=5'/3'-nucleotidase SurE;protein_id=WP_001221538.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	56332	57381	.	-	.	ID=gene-C9E94_RS04200;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=C9E94_RS04200;old_locus_tag=C9E94_04285
NZ_PYJR01000037.1	Protein Homology	CDS	56332	57381	.	-	0	ID=cds-WP_000134246.1;Parent=gene-C9E94_RS04200;Dbxref=GenBank:WP_000134246.1;Name=WP_000134246.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461849.1;locus_tag=C9E94_RS04200;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_000134246.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	57378	57857	.	-	.	ID=gene-C9E94_RS04205;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=C9E94_RS04205;old_locus_tag=C9E94_04290
NZ_PYJR01000037.1	Protein Homology	CDS	57378	57857	.	-	0	ID=cds-WP_001219245.1;Parent=gene-C9E94_RS04205;Dbxref=GenBank:WP_001219245.1;Name=WP_001219245.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461850.1;locus_tag=C9E94_RS04205;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_001219245.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	57857	58567	.	-	.	ID=gene-C9E94_RS04210;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=C9E94_RS04210;old_locus_tag=C9E94_04295
NZ_PYJR01000037.1	Protein Homology	CDS	57857	58567	.	-	0	ID=cds-WP_000741649.1;Parent=gene-C9E94_RS04210;Dbxref=GenBank:WP_000741649.1;Name=WP_000741649.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461851.1;locus_tag=C9E94_RS04210;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_000741649.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	58586	58897	.	-	.	ID=gene-C9E94_RS04215;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=C9E94_RS04215;old_locus_tag=C9E94_04300
NZ_PYJR01000037.1	Protein Homology	CDS	58586	58897	.	-	0	ID=cds-WP_000517480.1;Parent=gene-C9E94_RS04215;Dbxref=GenBank:WP_000517480.1;Name=WP_000517480.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461852.1;locus_tag=C9E94_RS04215;product=cell division protein FtsB;protein_id=WP_000517480.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	59088	59411	.	-	.	ID=gene-C9E94_RS04220;Name=C9E94_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04220;old_locus_tag=C9E94_04305
NZ_PYJR01000037.1	Protein Homology	CDS	59088	59411	.	-	0	ID=cds-WP_001537530.1;Parent=gene-C9E94_RS04220;Dbxref=GenBank:WP_001537530.1;Name=WP_001537530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246104.1;locus_tag=C9E94_RS04220;product=DUF3561 family protein;protein_id=WP_001537530.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	59462	60067	.	-	.	ID=gene-C9E94_RS04225;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=C9E94_RS04225;old_locus_tag=C9E94_04310
NZ_PYJR01000037.1	Protein Homology	CDS	59462	60067	.	-	0	ID=cds-WP_001173663.1;Parent=gene-C9E94_RS04225;Dbxref=GenBank:WP_001173663.1;Name=WP_001173663.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461854.1;locus_tag=C9E94_RS04225;product=adenylyl-sulfate kinase;protein_id=WP_001173663.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	60054	61493	.	-	.	ID=gene-C9E94_RS04230;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=C9E94_RS04230;old_locus_tag=C9E94_04315
NZ_PYJR01000037.1	Protein Homology	CDS	60054	61493	.	-	0	ID=cds-WP_001092269.1;Parent=gene-C9E94_RS04230;Dbxref=GenBank:WP_001092269.1;Name=WP_001092269.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461855.1;locus_tag=C9E94_RS04230;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_001092269.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	61503	62411	.	-	.	ID=gene-C9E94_RS04235;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=C9E94_RS04235;old_locus_tag=C9E94_04320
NZ_PYJR01000037.1	Protein Homology	CDS	61503	62411	.	-	0	ID=cds-WP_000372384.1;Parent=gene-C9E94_RS04235;Dbxref=GenBank:WP_000372384.1;Name=WP_000372384.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=C9E94_RS04235;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_000372384.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	62662	63708	.	+	.	ID=gene-C9E94_RS04240;Name=C9E94_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04240;old_locus_tag=C9E94_04325
NZ_PYJR01000037.1	Protein Homology	CDS	62662	63708	.	+	0	ID=cds-WP_000490481.1;Parent=gene-C9E94_RS04240;Dbxref=GenBank:WP_000490481.1;Name=WP_000490481.1;Ontology_term=GO:0008235;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461857.1;locus_tag=C9E94_RS04240;product=aminopeptidase;protein_id=WP_000490481.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	direct_repeat	63723	65094	.	+	.	ID=id-NZ_PYJR01000037.1:63723..65094;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=63723..63751;rpt_unit_seq=cggtttatccccgctggcgcggggaacac
NZ_PYJR01000037.1	RefSeq	gene	65191	65484	.	-	.	ID=gene-C9E94_RS04245;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=C9E94_RS04245;old_locus_tag=C9E94_04330
NZ_PYJR01000037.1	Protein Homology	CDS	65191	65484	.	-	0	ID=cds-WP_001518648.1;Parent=gene-C9E94_RS04245;Dbxref=GenBank:WP_001518648.1;Name=WP_001518648.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311635.1;locus_tag=C9E94_RS04245;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=WP_001518648.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	65484	66404	.	-	.	ID=gene-C9E94_RS04250;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=C9E94_RS04250;old_locus_tag=C9E94_04335
NZ_PYJR01000037.1	Protein Homology	CDS	65484	66404	.	-	0	ID=cds-WP_000144837.1;Parent=gene-C9E94_RS04250;Dbxref=GenBank:WP_000144837.1;Name=WP_000144837.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461859.1;locus_tag=C9E94_RS04250;product=type I-E CRISPR-associated endonuclease Cas1e;protein_id=WP_000144837.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	66401	67051	.	-	.	ID=gene-C9E94_RS04255;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=C9E94_RS04255;old_locus_tag=C9E94_04340
NZ_PYJR01000037.1	Protein Homology	CDS	66401	67051	.	-	0	ID=cds-WP_023993666.1;Parent=gene-C9E94_RS04255;Dbxref=GenBank:WP_023993666.1;Name=WP_023993666.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas6e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461860.1;locus_tag=C9E94_RS04255;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WP_023993666.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	67033	67779	.	-	.	ID=gene-C9E94_RS04260;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=C9E94_RS04260;old_locus_tag=C9E94_04345
NZ_PYJR01000037.1	Protein Homology	CDS	67033	67779	.	-	0	ID=cds-WP_000085112.1;Parent=gene-C9E94_RS04260;Dbxref=GenBank:WP_000085112.1;Name=WP_000085112.1;Ontology_term=GO:0043571,GO:0051607,GO:0003723;gbkey=CDS;gene=cas5e;go_function=RNA binding|0003723||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461861.1;locus_tag=C9E94_RS04260;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=WP_000085112.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	67790	68848	.	-	.	ID=gene-C9E94_RS04265;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=C9E94_RS04265;old_locus_tag=C9E94_04350
NZ_PYJR01000037.1	Protein Homology	CDS	67790	68848	.	-	0	ID=cds-WP_023993664.1;Parent=gene-C9E94_RS04265;Dbxref=GenBank:WP_023993664.1;Name=WP_023993664.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas7e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461862.1;locus_tag=C9E94_RS04265;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=WP_023993664.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	68862	69422	.	-	.	ID=gene-C9E94_RS04270;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;gene_synonym=cse2;locus_tag=C9E94_RS04270;old_locus_tag=C9E94_04355
NZ_PYJR01000037.1	Protein Homology	CDS	68862	69422	.	-	0	ID=cds-WP_135400831.1;Parent=gene-C9E94_RS04270;Dbxref=GenBank:WP_135400831.1;Name=WP_135400831.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casB;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461863.1;locus_tag=C9E94_RS04270;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=WP_135400831.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	69419	70975	.	-	.	ID=gene-C9E94_RS04275;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;gene_synonym=cse1;locus_tag=C9E94_RS04275;old_locus_tag=C9E94_04360
NZ_PYJR01000037.1	Protein Homology	CDS	69419	70975	.	-	0	ID=cds-WP_000368582.1;Parent=gene-C9E94_RS04275;Dbxref=GenBank:WP_000368582.1;Name=WP_000368582.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461864.1;locus_tag=C9E94_RS04275;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WP_000368582.1;transl_table=11
NZ_PYJR01000037.1	RefSeq	gene	70987	73650	.	-	.	ID=gene-C9E94_RS04280;Name=C9E94_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04280;old_locus_tag=C9E94_04365
NZ_PYJR01000037.1	Protein Homology	CDS	70987	73650	.	-	0	ID=cds-WP_023993663.1;Parent=gene-C9E94_RS04280;Dbxref=GenBank:WP_023993663.1;Name=WP_023993663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461865.1;locus_tag=C9E94_RS04280;product=CRISPR-associated helicase/endonuclease Cas3;protein_id=WP_023993663.1;transl_table=11
##sequence-region NZ_PYJR01000062.1 1 70058
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000062.1	RefSeq	region	1	70058	.	+	.	ID=NZ_PYJR01000062.1:1..70058;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000062.1	RefSeq	gene	59	1579	.	+	.	ID=gene-C9E94_RS08135;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=C9E94_RS08135;old_locus_tag=C9E94_08315
NZ_PYJR01000062.1	Protein Homology	CDS	59	1579	.	+	0	ID=cds-WP_023240235.1;Parent=gene-C9E94_RS08135;Dbxref=GenBank:WP_023240235.1;Name=WP_023240235.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461760.1;locus_tag=C9E94_RS08135;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_023240235.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	1576	2541	.	-	.	ID=gene-C9E94_RS08140;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=C9E94_RS08140;old_locus_tag=C9E94_08320
NZ_PYJR01000062.1	Protein Homology	CDS	1576	2541	.	-	0	ID=cds-WP_001278201.1;Parent=gene-C9E94_RS08140;Dbxref=GenBank:WP_001278201.1;Name=WP_001278201.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=C9E94_RS08140;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_001278201.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	2534	3307	.	-	.	ID=gene-C9E94_RS08145;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=C9E94_RS08145;old_locus_tag=C9E94_08325
NZ_PYJR01000062.1	Protein Homology	CDS	2534	3307	.	-	0	ID=cds-WP_000804536.1;Parent=gene-C9E94_RS08145;Dbxref=GenBank:WP_000804536.1;Name=WP_000804536.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461758.1;locus_tag=C9E94_RS08145;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_000804536.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	3505	3864	.	-	.	ID=gene-C9E94_RS08150;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=C9E94_RS08150;old_locus_tag=C9E94_08330
NZ_PYJR01000062.1	Protein Homology	CDS	3505	3864	.	-	0	ID=cds-WP_000255198.1;Parent=gene-C9E94_RS08150;Dbxref=GenBank:WP_000255198.1;Name=WP_000255198.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461757.1;locus_tag=C9E94_RS08150;product=transcriptional regulator GutM;protein_id=WP_000255198.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	3940	4719	.	-	.	ID=gene-C9E94_RS08155;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=C9E94_RS08155;old_locus_tag=C9E94_08335
NZ_PYJR01000062.1	Protein Homology	CDS	3940	4719	.	-	0	ID=cds-WP_001077372.1;Parent=gene-C9E94_RS08155;Dbxref=GenBank:WP_001077372.1;Name=WP_001077372.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461756.1;locus_tag=C9E94_RS08155;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_001077372.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	4731	5093	.	-	.	ID=gene-C9E94_RS08160;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=C9E94_RS08160;old_locus_tag=C9E94_08340
NZ_PYJR01000062.1	Protein Homology	CDS	4731	5093	.	-	0	ID=cds-WP_000111555.1;Parent=gene-C9E94_RS08160;Dbxref=GenBank:WP_000111555.1;Name=WP_000111555.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461755.1;locus_tag=C9E94_RS08160;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_000111555.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	5105	6076	.	-	.	ID=gene-C9E94_RS08165;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=C9E94_RS08165;old_locus_tag=C9E94_08345
NZ_PYJR01000062.1	Protein Homology	CDS	5105	6076	.	-	0	ID=cds-WP_000199039.1;Parent=gene-C9E94_RS08165;Dbxref=GenBank:WP_000199039.1;Name=WP_000199039.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461754.1;locus_tag=C9E94_RS08165;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_000199039.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	6073	6636	.	-	.	ID=gene-C9E94_RS08170;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=C9E94_RS08170;old_locus_tag=C9E94_08350
NZ_PYJR01000062.1	Protein Homology	CDS	6073	6636	.	-	0	ID=cds-WP_000573333.1;Parent=gene-C9E94_RS08170;Dbxref=GenBank:WP_000573333.1;Name=WP_000573333.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461753.1;locus_tag=C9E94_RS08170;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000573333.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	6889	7968	.	+	.	ID=gene-C9E94_RS08175;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=C9E94_RS08175;old_locus_tag=C9E94_08355
NZ_PYJR01000062.1	Protein Homology	CDS	6889	7968	.	+	0	ID=cds-WP_000476822.1;Parent=gene-C9E94_RS08175;Dbxref=GenBank:WP_000476822.1;Name=WP_000476822.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461752.1;locus_tag=C9E94_RS08175;product=lytic murein transglycosylase B;protein_id=WP_000476822.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	8006	8251	.	-	.	ID=gene-C9E94_RS23615;Name=C9E94_RS23615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23615;old_locus_tag=C9E94_08360
NZ_PYJR01000062.1	Protein Homology	CDS	8006	8251	.	-	0	ID=cds-WP_001519391.1;Parent=gene-C9E94_RS23615;Dbxref=GenBank:WP_001519391.1;Name=WP_001519391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053775.1;locus_tag=C9E94_RS23615;product=hypothetical protein;protein_id=WP_001519391.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	8447	8944	.	+	.	ID=gene-C9E94_RS08185;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=C9E94_RS08185;old_locus_tag=C9E94_08365
NZ_PYJR01000062.1	Protein Homology	CDS	8447	8944	.	+	0	ID=cds-WP_010835022.1;Parent=gene-C9E94_RS08185;Dbxref=GenBank:WP_010835022.1;Name=WP_010835022.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461751.1;locus_tag=C9E94_RS08185;product=nicotinamide-nucleotide amidase;protein_id=WP_010835022.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	9029	10090	.	+	.	ID=gene-C9E94_RS08190;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=C9E94_RS08190;old_locus_tag=C9E94_08370
NZ_PYJR01000062.1	Protein Homology	CDS	9029	10090	.	+	0	ID=cds-WP_000963150.1;Parent=gene-C9E94_RS08190;Dbxref=GenBank:WP_000963150.1;Name=WP_000963150.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461750.1;locus_tag=C9E94_RS08190;product=recombinase RecA;protein_id=WP_000963150.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	10207	10707	.	+	.	ID=gene-C9E94_RS08195;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=C9E94_RS08195;old_locus_tag=C9E94_08375
NZ_PYJR01000062.1	Protein Homology	CDS	10207	10707	.	+	0	ID=cds-WP_001294863.1;Parent=gene-C9E94_RS08195;Dbxref=GenBank:WP_001294863.1;Name=WP_001294863.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461749.1;locus_tag=C9E94_RS08195;product=recombination regulator RecX;protein_id=WP_001294863.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	10943	13573	.	+	.	ID=gene-C9E94_RS08205;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=C9E94_RS08205;old_locus_tag=C9E94_08385
NZ_PYJR01000062.1	Protein Homology	CDS	10943	13573	.	+	0	ID=cds-WP_135400931.1;Parent=gene-C9E94_RS08205;Dbxref=GenBank:WP_135400931.1;Name=WP_135400931.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461748.1;locus_tag=C9E94_RS08205;product=alanine--tRNA ligase;protein_id=WP_135400931.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	13808	13993	.	+	.	ID=gene-C9E94_RS08210;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=C9E94_RS08210;old_locus_tag=C9E94_08390
NZ_PYJR01000062.1	Protein Homology	CDS	13808	13993	.	+	0	ID=cds-WP_000906486.1;Parent=gene-C9E94_RS08210;Dbxref=GenBank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=C9E94_RS08210;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	14297	14389	.	+	.	ID=gene-C9E94_RS08215;Name=C9E94_RS08215;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS08215;old_locus_tag=C9E94_08400
NZ_PYJR01000062.1	tRNAscan-SE	tRNA	14297	14389	.	+	.	ID=rna-C9E94_RS08215;Parent=gene-C9E94_RS08215;anticodon=(pos:14331..14333);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS08215;product=tRNA-Ser
NZ_PYJR01000062.1	tRNAscan-SE	exon	14297	14389	.	+	.	ID=exon-C9E94_RS08215-1;Parent=rna-C9E94_RS08215;anticodon=(pos:14331..14333);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS08215;product=tRNA-Ser
NZ_PYJR01000062.1	RefSeq	gene	14393	14469	.	+	.	ID=gene-C9E94_RS08220;Name=C9E94_RS08220;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS08220;old_locus_tag=C9E94_08405
NZ_PYJR01000062.1	tRNAscan-SE	tRNA	14393	14469	.	+	.	ID=rna-C9E94_RS08220;Parent=gene-C9E94_RS08220;anticodon=(pos:14427..14429);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS08220;product=tRNA-Arg
NZ_PYJR01000062.1	tRNAscan-SE	exon	14393	14469	.	+	.	ID=exon-C9E94_RS08220-1;Parent=rna-C9E94_RS08220;anticodon=(pos:14427..14429);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS08220;product=tRNA-Arg
NZ_PYJR01000062.1	RefSeq	gene	14532	14608	.	+	.	ID=gene-C9E94_RS08225;Name=C9E94_RS08225;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS08225;old_locus_tag=C9E94_08410
NZ_PYJR01000062.1	tRNAscan-SE	tRNA	14532	14608	.	+	.	ID=rna-C9E94_RS08225;Parent=gene-C9E94_RS08225;anticodon=(pos:14566..14568);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS08225;product=tRNA-Arg
NZ_PYJR01000062.1	tRNAscan-SE	exon	14532	14608	.	+	.	ID=exon-C9E94_RS08225-1;Parent=rna-C9E94_RS08225;anticodon=(pos:14566..14568);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS08225;product=tRNA-Arg
NZ_PYJR01000062.1	RefSeq	gene	14802	14878	.	+	.	ID=gene-C9E94_RS08230;Name=C9E94_RS08230;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS08230;old_locus_tag=C9E94_08415
NZ_PYJR01000062.1	tRNAscan-SE	tRNA	14802	14878	.	+	.	ID=rna-C9E94_RS08230;Parent=gene-C9E94_RS08230;anticodon=(pos:14836..14838);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS08230;product=tRNA-Arg
NZ_PYJR01000062.1	tRNAscan-SE	exon	14802	14878	.	+	.	ID=exon-C9E94_RS08230-1;Parent=rna-C9E94_RS08230;anticodon=(pos:14836..14838);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS08230;product=tRNA-Arg
NZ_PYJR01000062.1	RefSeq	gene	15115	15681	.	+	.	ID=gene-C9E94_RS08235;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=C9E94_RS08235;old_locus_tag=C9E94_08420
NZ_PYJR01000062.1	Protein Homology	CDS	15115	15681	.	+	0	ID=cds-WP_000271296.1;Parent=gene-C9E94_RS08235;Dbxref=GenBank:WP_000271296.1;Name=WP_000271296.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461746.1;locus_tag=C9E94_RS08235;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_000271296.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	15678	16103	.	+	.	ID=gene-C9E94_RS08240;Name=C9E94_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08240;old_locus_tag=C9E94_08425
NZ_PYJR01000062.1	Protein Homology	CDS	15678	16103	.	+	0	ID=cds-WP_001279499.1;Parent=gene-C9E94_RS08240;Dbxref=GenBank:WP_001279499.1;Name=WP_001279499.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461745.1;locus_tag=C9E94_RS08240;product=YqaA family protein;protein_id=WP_001279499.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	16180	17736	.	+	.	ID=gene-C9E94_RS08245;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=C9E94_RS08245;old_locus_tag=C9E94_08430
NZ_PYJR01000062.1	Protein Homology	CDS	16180	17736	.	+	0	ID=cds-WP_000611821.1;Parent=gene-C9E94_RS08245;Dbxref=GenBank:WP_000611821.1;Name=WP_000611821.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461744.1;locus_tag=C9E94_RS08245;product=glutamate--cysteine ligase;protein_id=WP_000611821.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	17886	18401	.	+	.	ID=gene-C9E94_RS08250;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=C9E94_RS08250;old_locus_tag=C9E94_08435
NZ_PYJR01000062.1	Protein Homology	CDS	17886	18401	.	+	0	ID=cds-WP_001130194.1;Parent=gene-C9E94_RS08250;Dbxref=GenBank:WP_001130194.1;Name=WP_001130194.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=C9E94_RS08250;product=S-ribosylhomocysteine lyase;protein_id=WP_001130194.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	18747	20117	.	+	.	ID=gene-C9E94_RS08255;Name=C9E94_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08255;old_locus_tag=C9E94_08440
NZ_PYJR01000062.1	Protein Homology	CDS	18747	20117	.	+	0	ID=cds-WP_135400932.1;Parent=gene-C9E94_RS08255;Dbxref=GenBank:WP_135400932.1;Name=WP_135400932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461742.1;locus_tag=C9E94_RS08255;product=carbohydrate porin;protein_id=WP_135400932.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	20166	21704	.	-	.	ID=gene-C9E94_RS08260;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=C9E94_RS08260;old_locus_tag=C9E94_08445
NZ_PYJR01000062.1	Protein Homology	CDS	20166	21704	.	-	0	ID=cds-WP_001187297.1;Parent=gene-C9E94_RS08260;Dbxref=GenBank:WP_001187297.1;Name=WP_001187297.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461741.1;locus_tag=C9E94_RS08260;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_001187297.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	21721	22893	.	-	.	ID=gene-C9E94_RS08265;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=C9E94_RS08265;old_locus_tag=C9E94_08450
NZ_PYJR01000062.1	Protein Homology	CDS	21721	22893	.	-	0	ID=cds-WP_001275600.1;Parent=gene-C9E94_RS08265;Dbxref=GenBank:WP_001275600.1;Name=WP_001275600.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461740.1;locus_tag=C9E94_RS08265;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_001275600.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	23020	23550	.	-	.	ID=gene-C9E94_RS08270;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=C9E94_RS08270;old_locus_tag=C9E94_08455
NZ_PYJR01000062.1	Protein Homology	CDS	23020	23550	.	-	0	ID=cds-WP_000378431.1;Parent=gene-C9E94_RS08270;Dbxref=GenBank:WP_000378431.1;Name=WP_000378431.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461739.1;locus_tag=C9E94_RS08270;product=transcriptional repressor MprA;protein_id=WP_000378431.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	24047	25231	.	-	.	ID=gene-C9E94_RS08275;Name=C9E94_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08275;old_locus_tag=C9E94_08460
NZ_PYJR01000062.1	Protein Homology	CDS	24047	25231	.	-	0	ID=cds-WP_135400933.1;Parent=gene-C9E94_RS08275;Dbxref=GenBank:WP_135400933.1;Name=WP_135400933.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461738.1;locus_tag=C9E94_RS08275;product=MFS transporter;protein_id=WP_135400933.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	25396	26391	.	-	.	ID=gene-C9E94_RS08280;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=C9E94_RS08280;old_locus_tag=C9E94_08465
NZ_PYJR01000062.1	Protein Homology	CDS	25396	26391	.	-	0	ID=cds-WP_001216613.1;Parent=gene-C9E94_RS08280;Dbxref=GenBank:WP_001216613.1;Name=WP_001216613.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461737.1;locus_tag=C9E94_RS08280;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_001216613.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	26461	27525	.	-	.	ID=gene-C9E94_RS08285;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=C9E94_RS08285;old_locus_tag=C9E94_08470
NZ_PYJR01000062.1	Protein Homology	CDS	26461	27525	.	-	0	ID=cds-WP_135400934.1;Parent=gene-C9E94_RS08285;Dbxref=GenBank:WP_135400934.1;Name=WP_135400934.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461736.1;locus_tag=C9E94_RS08285;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_135400934.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	27518	28720	.	-	.	ID=gene-C9E94_RS08290;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=C9E94_RS08290;old_locus_tag=C9E94_08475
NZ_PYJR01000062.1	Protein Homology	CDS	27518	28720	.	-	0	ID=cds-WP_000985529.1;Parent=gene-C9E94_RS08290;Dbxref=GenBank:WP_000985529.1;Name=WP_000985529.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=C9E94_RS08290;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_000985529.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	29075	30034	.	-	.	ID=gene-C9E94_RS08295;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=C9E94_RS08295;old_locus_tag=C9E94_08480
NZ_PYJR01000062.1	Protein Homology	CDS	29075	30034	.	-	0	ID=cds-WP_000777901.1;Parent=gene-C9E94_RS08295;Dbxref=GenBank:WP_000777901.1;Name=WP_000777901.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461734.1;locus_tag=C9E94_RS08295;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000777901.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	30045	32189	.	-	.	ID=gene-C9E94_RS08300;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=C9E94_RS08300;old_locus_tag=C9E94_08485
NZ_PYJR01000062.1	Protein Homology	CDS	30045	32189	.	-	0	ID=cds-WP_053444876.1;Parent=gene-C9E94_RS08300;Dbxref=GenBank:WP_053444876.1;Name=WP_053444876.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461733.1;locus_tag=C9E94_RS08300;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_053444876.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	32162	32572	.	-	.	ID=gene-C9E94_RS08305;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=C9E94_RS08305;old_locus_tag=C9E94_08490
NZ_PYJR01000062.1	Protein Homology	CDS	32162	32572	.	-	0	ID=cds-WP_135400935.1;Parent=gene-C9E94_RS08305;Dbxref=GenBank:WP_135400935.1;Name=WP_135400935.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461732.1;locus_tag=C9E94_RS08305;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_135400935.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	32569	32814	.	-	.	ID=gene-C9E94_RS08310;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=C9E94_RS08310;old_locus_tag=C9E94_08495
NZ_PYJR01000062.1	Protein Homology	CDS	32569	32814	.	-	0	ID=cds-WP_000028870.1;Parent=gene-C9E94_RS08310;Dbxref=GenBank:WP_000028870.1;Name=WP_000028870.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461731.1;locus_tag=C9E94_RS08310;product=glutaredoxin-like protein NrdH;protein_id=WP_000028870.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	33086	33517	.	-	.	ID=gene-C9E94_RS08320;Name=C9E94_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08320;old_locus_tag=C9E94_08505
NZ_PYJR01000062.1	Protein Homology	CDS	33086	33517	.	-	0	ID=cds-WP_000209808.1;Parent=gene-C9E94_RS08320;Dbxref=GenBank:WP_000209808.1;Name=WP_000209808.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461730.1;locus_tag=C9E94_RS08320;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000209808.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	33606	34940	.	+	.	ID=gene-C9E94_RS08325;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=C9E94_RS08325;old_locus_tag=C9E94_08510
NZ_PYJR01000062.1	Protein Homology	CDS	33606	34940	.	+	0	ID=cds-WP_135400936.1;Parent=gene-C9E94_RS08325;Dbxref=GenBank:WP_135400936.1;Name=WP_135400936.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=C9E94_RS08325;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_135400936.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	35024	35350	.	-	.	ID=gene-C9E94_RS08330;Name=C9E94_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08330;old_locus_tag=C9E94_08515
NZ_PYJR01000062.1	Protein Homology	CDS	35024	35350	.	-	0	ID=cds-WP_001519557.1;Parent=gene-C9E94_RS08330;Dbxref=GenBank:WP_001519557.1;Name=WP_001519557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528627.1;locus_tag=C9E94_RS08330;product=DUF883 domain-containing protein;protein_id=WP_001519557.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	35512	35862	.	+	.	ID=gene-C9E94_RS08335;Name=C9E94_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08335;old_locus_tag=C9E94_08520
NZ_PYJR01000062.1	Protein Homology	CDS	35512	35862	.	+	0	ID=cds-WP_000281304.1;Parent=gene-C9E94_RS08335;Dbxref=GenBank:WP_000281304.1;Name=WP_000281304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461727.1;locus_tag=C9E94_RS08335;product=DUF2002 family protein;protein_id=WP_000281304.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	35897	36346	.	-	.	ID=gene-C9E94_RS08340;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=C9E94_RS08340;old_locus_tag=C9E94_08525
NZ_PYJR01000062.1	Protein Homology	CDS	35897	36346	.	-	0	ID=cds-WP_000492669.1;Parent=gene-C9E94_RS08340;Dbxref=GenBank:WP_000492669.1;Name=WP_000492669.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461726.1;locus_tag=C9E94_RS08340;product=L-alanine exporter AlaE;protein_id=WP_000492669.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	37044	37445	.	+	.	ID=gene-C9E94_RS08345;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=C9E94_RS08345;old_locus_tag=C9E94_08530
NZ_PYJR01000062.1	Protein Homology	CDS	37044	37445	.	+	0	ID=cds-WP_001051100.1;Parent=gene-C9E94_RS08345;Dbxref=GenBank:WP_001051100.1;Name=WP_001051100.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461725.1;locus_tag=C9E94_RS08345;product=DNA-binding protein StpA;protein_id=WP_001051100.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	37535	37714	.	-	.	ID=gene-C9E94_RS08350;Name=C9E94_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08350;old_locus_tag=C9E94_08535
NZ_PYJR01000062.1	Protein Homology	CDS	37535	37714	.	-	0	ID=cds-WP_000494944.1;Parent=gene-C9E94_RS08350;Dbxref=GenBank:WP_000494944.1;Name=WP_000494944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494935.1;locus_tag=C9E94_RS08350;product=hypothetical protein;protein_id=WP_000494944.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	37793	38320	.	-	.	ID=gene-C9E94_RS08355;Name=C9E94_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08355;old_locus_tag=C9E94_08540
NZ_PYJR01000062.1	Protein Homology	CDS	37793	38320	.	-	0	ID=cds-WP_000022009.1;Parent=gene-C9E94_RS08355;Dbxref=GenBank:WP_000022009.1;Name=WP_000022009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461724.1;locus_tag=C9E94_RS08355;product=rhodanese family protein;protein_id=WP_000022009.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	38330	38629	.	-	.	ID=gene-C9E94_RS08360;Name=C9E94_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08360;old_locus_tag=C9E94_08545
NZ_PYJR01000062.1	Protein Homology	CDS	38330	38629	.	-	0	ID=cds-WP_000137433.1;Parent=gene-C9E94_RS08360;Dbxref=GenBank:WP_000137433.1;Name=WP_000137433.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461723.1;locus_tag=C9E94_RS08360;product=ArsR/SmtB family transcription factor;protein_id=WP_000137433.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	38812	38970	.	+	.	ID=gene-C9E94_RS08365;Name=C9E94_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08365;old_locus_tag=C9E94_08550
NZ_PYJR01000062.1	Protein Homology	CDS	38812	38970	.	+	0	ID=cds-WP_000508175.1;Parent=gene-C9E94_RS08365;Dbxref=GenBank:WP_000508175.1;Name=WP_000508175.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461722.1;locus_tag=C9E94_RS08365;product=YqaE/Pmp3 family membrane protein;protein_id=WP_000508175.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	39070	39519	.	+	.	ID=gene-C9E94_RS08375;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=C9E94_RS08375;old_locus_tag=C9E94_08560
NZ_PYJR01000062.1	Protein Homology	CDS	39070	39519	.	+	0	ID=cds-WP_000522406.1;Parent=gene-C9E94_RS08375;Dbxref=GenBank:WP_000522406.1;Name=WP_000522406.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461721.1;locus_tag=C9E94_RS08375;product=peptidoglycan-binding protein LysM;protein_id=WP_000522406.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	39541	40218	.	-	.	ID=gene-C9E94_RS08380;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=C9E94_RS08380;old_locus_tag=C9E94_08565
NZ_PYJR01000062.1	Protein Homology	CDS	39541	40218	.	-	0	ID=cds-WP_000126152.1;Parent=gene-C9E94_RS08380;Dbxref=GenBank:WP_000126152.1;Name=WP_000126152.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461720.1;locus_tag=C9E94_RS08380;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_000126152.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	40260	41660	.	-	.	ID=gene-C9E94_RS08385;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=C9E94_RS08385;old_locus_tag=C9E94_08570
NZ_PYJR01000062.1	Protein Homology	CDS	40260	41660	.	-	0	ID=cds-WP_000531282.1;Parent=gene-C9E94_RS08385;Dbxref=GenBank:WP_000531282.1;Name=WP_000531282.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461719.1;locus_tag=C9E94_RS08385;product=GABA permease;protein_id=WP_000531282.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	41791	43074	.	-	.	ID=gene-C9E94_RS08390;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=C9E94_RS08390;old_locus_tag=C9E94_08575
NZ_PYJR01000062.1	Protein Homology	CDS	41791	43074	.	-	0	ID=cds-WP_001095555.1;Parent=gene-C9E94_RS08390;Dbxref=GenBank:WP_001095555.1;Name=WP_001095555.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461718.1;locus_tag=C9E94_RS08390;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_001095555.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	43089	44537	.	-	.	ID=gene-C9E94_RS08395;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=C9E94_RS08395;old_locus_tag=C9E94_08580
NZ_PYJR01000062.1	Protein Homology	CDS	43089	44537	.	-	0	ID=cds-WP_001176521.1;Parent=gene-C9E94_RS08395;Dbxref=GenBank:WP_001176521.1;Name=WP_001176521.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461717.1;locus_tag=C9E94_RS08395;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_001176521.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	44559	45827	.	-	.	ID=gene-C9E94_RS08400;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=C9E94_RS08400;old_locus_tag=C9E94_08585
NZ_PYJR01000062.1	Protein Homology	CDS	44559	45827	.	-	0	ID=cds-WP_000271905.1;Parent=gene-C9E94_RS08400;Dbxref=GenBank:WP_000271905.1;Name=WP_000271905.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461716.1;locus_tag=C9E94_RS08400;product=L-2-hydroxyglutarate oxidase;protein_id=WP_000271905.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	45853	46830	.	-	.	ID=gene-C9E94_RS08405;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=C9E94_RS08405;old_locus_tag=C9E94_08590
NZ_PYJR01000062.1	Protein Homology	CDS	45853	46830	.	-	0	ID=cds-WP_000993090.1;Parent=gene-C9E94_RS08405;Dbxref=GenBank:WP_000993090.1;Name=WP_000993090.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=C9E94_RS08405;product=glutarate dioxygenase GlaH;protein_id=WP_000993090.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	47133	48647	.	-	.	ID=gene-C9E94_RS08410;Name=C9E94_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08410;old_locus_tag=C9E94_08595
NZ_PYJR01000062.1	Protein Homology	CDS	47133	48647	.	-	0	ID=cds-WP_000382036.1;Parent=gene-C9E94_RS08410;Dbxref=GenBank:WP_000382036.1;Name=WP_000382036.1;Ontology_term=GO:0006810,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461714.1;locus_tag=C9E94_RS08410;product=tripartite tricarboxylate transporter permease;protein_id=WP_000382036.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	48658	49092	.	-	.	ID=gene-C9E94_RS08415;Name=C9E94_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08415;old_locus_tag=C9E94_08600
NZ_PYJR01000062.1	Protein Homology	CDS	48658	49092	.	-	0	ID=cds-WP_001574835.1;Parent=gene-C9E94_RS08415;Dbxref=GenBank:WP_001574835.1;Name=WP_001574835.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461713.3;locus_tag=C9E94_RS08415;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_001574835.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	49104	50081	.	-	.	ID=gene-C9E94_RS08420;Name=C9E94_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08420;old_locus_tag=C9E94_08605
NZ_PYJR01000062.1	Protein Homology	CDS	49104	50081	.	-	0	ID=cds-WP_000744414.1;Parent=gene-C9E94_RS08420;Dbxref=GenBank:WP_000744414.1;Name=WP_000744414.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=C9E94_RS08420;product=Bug family tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_000744414.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	50236	50910	.	+	.	ID=gene-C9E94_RS08425;Name=tctD;gbkey=Gene;gene=tctD;gene_biotype=protein_coding;locus_tag=C9E94_RS08425;old_locus_tag=C9E94_08610
NZ_PYJR01000062.1	Protein Homology	CDS	50236	50910	.	+	0	ID=cds-WP_001237934.1;Parent=gene-C9E94_RS08425;Dbxref=GenBank:WP_001237934.1;Name=WP_001237934.1;gbkey=CDS;gene=tctD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=C9E94_RS08425;product=transcriptional regulator TctD;protein_id=WP_001237934.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	50897	52312	.	+	.	ID=gene-C9E94_RS08430;Name=C9E94_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08430;old_locus_tag=C9E94_08615
NZ_PYJR01000062.1	Protein Homology	CDS	50897	52312	.	+	0	ID=cds-WP_000872338.1;Parent=gene-C9E94_RS08430;Dbxref=GenBank:WP_000872338.1;Name=WP_000872338.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461710.1;locus_tag=C9E94_RS08430;product=sensor histidine kinase;protein_id=WP_000872338.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	52445	53458	.	+	.	ID=gene-C9E94_RS08435;Name=C9E94_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08435;old_locus_tag=C9E94_08620
NZ_PYJR01000062.1	Protein Homology	CDS	52445	53458	.	+	0	ID=cds-WP_001059351.1;Parent=gene-C9E94_RS08435;Dbxref=GenBank:WP_001059351.1;Name=WP_001059351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461709.1;locus_tag=C9E94_RS08435;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_001059351.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	54180	55076	.	-	.	ID=gene-C9E94_RS08440;Name=C9E94_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08440;old_locus_tag=C9E94_08625
NZ_PYJR01000062.1	Protein Homology	CDS	54180	55076	.	-	0	ID=cds-WP_000701512.1;Parent=gene-C9E94_RS08440;Dbxref=GenBank:WP_000701512.1;Name=WP_000701512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461708.1;locus_tag=C9E94_RS08440;product=antimicrobial resistance protein Mig-14;protein_id=WP_000701512.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	55371	56300	.	-	.	ID=gene-C9E94_RS08450;Name=C9E94_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08450;old_locus_tag=C9E94_08635
NZ_PYJR01000062.1	Protein Homology	CDS	55371	56300	.	-	0	ID=cds-WP_135400937.1;Parent=gene-C9E94_RS08450;Dbxref=GenBank:WP_135400937.1;Name=WP_135400937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461707.1;locus_tag=C9E94_RS08450;product=VirK family antimicrobial peptide resistance protein;protein_id=WP_135400937.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	56819	57871	.	+	.	ID=gene-C9E94_RS08455;Name=pipB2;gbkey=Gene;gene=pipB2;gene_biotype=protein_coding;locus_tag=C9E94_RS08455;old_locus_tag=C9E94_08645
NZ_PYJR01000062.1	Protein Homology	CDS	56819	57871	.	+	0	ID=cds-WP_135400938.1;Parent=gene-C9E94_RS08455;Dbxref=GenBank:WP_135400938.1;Name=WP_135400938.1;gbkey=CDS;gene=pipB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461706.1;locus_tag=C9E94_RS08455;product=SPI-2 type III secretion system effector PipB2;protein_id=WP_135400938.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	58046	58378	.	+	.	ID=gene-C9E94_RS08460;Name=C9E94_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08460;old_locus_tag=C9E94_08650
NZ_PYJR01000062.1	Protein Homology	CDS	58046	58378	.	+	0	ID=cds-WP_077463764.1;Parent=gene-C9E94_RS08460;Dbxref=GenBank:WP_077463764.1;Name=WP_077463764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449164.1;locus_tag=C9E94_RS08460;product=hypothetical protein;protein_id=WP_077463764.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	58910	61084	.	+	.	ID=gene-C9E94_RS08465;Name=C9E94_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08465;old_locus_tag=C9E94_08655
NZ_PYJR01000062.1	Protein Homology	CDS	58910	61084	.	+	0	ID=cds-WP_001532079.1;Parent=gene-C9E94_RS08465;Dbxref=GenBank:WP_001532079.1;Name=WP_001532079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542215.1;locus_tag=C9E94_RS08465;product=TonB-dependent siderophore receptor;protein_id=WP_001532079.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	61126	62061	.	-	.	ID=gene-C9E94_RS08470;Name=C9E94_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08470;old_locus_tag=C9E94_08660
NZ_PYJR01000062.1	Protein Homology	CDS	61126	62061	.	-	0	ID=cds-WP_000274378.1;Parent=gene-C9E94_RS08470;Dbxref=GenBank:WP_000274378.1;Name=WP_000274378.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461703.1;locus_tag=C9E94_RS08470;product=alpha/beta hydrolase;protein_id=WP_000274378.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	62093	63337	.	-	.	ID=gene-C9E94_RS08475;Name=C9E94_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08475;old_locus_tag=C9E94_08665
NZ_PYJR01000062.1	Protein Homology	CDS	62093	63337	.	-	0	ID=cds-WP_001239940.1;Parent=gene-C9E94_RS08475;Dbxref=GenBank:WP_001239940.1;Name=WP_001239940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461702.1;locus_tag=C9E94_RS08475;product=esterase family protein;protein_id=WP_001239940.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	63447	67103	.	-	.	ID=gene-C9E94_RS08480;Name=iroC;gbkey=Gene;gene=iroC;gene_biotype=protein_coding;locus_tag=C9E94_RS08480;old_locus_tag=C9E94_08670
NZ_PYJR01000062.1	Protein Homology	CDS	63447	67103	.	-	0	ID=cds-WP_135400939.1;Parent=gene-C9E94_RS08480;Dbxref=GenBank:WP_135400939.1;Name=WP_135400939.1;gbkey=CDS;gene=iroC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461701.1;locus_tag=C9E94_RS08480;product=salmochelin/enterobactin export ABC transporter IroC;protein_id=WP_135400939.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	67184	68299	.	-	.	ID=gene-C9E94_RS08485;Name=iroB;gbkey=Gene;gene=iroB;gene_biotype=protein_coding;locus_tag=C9E94_RS08485;old_locus_tag=C9E94_08675
NZ_PYJR01000062.1	Protein Homology	CDS	67184	68299	.	-	0	ID=cds-WP_001221110.1;Parent=gene-C9E94_RS08485;Dbxref=GenBank:WP_001221110.1;Name=WP_001221110.1;gbkey=CDS;gene=iroB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461700.1;locus_tag=C9E94_RS08485;product=salmochelin biosynthesis C-glycosyltransferase IroB;protein_id=WP_001221110.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	68990	69562	.	+	.	ID=gene-C9E94_RS08495;Name=hin;gbkey=Gene;gene=hin;gene_biotype=protein_coding;locus_tag=C9E94_RS08495;old_locus_tag=C9E94_08685
NZ_PYJR01000062.1	Protein Homology	CDS	68990	69562	.	+	0	ID=cds-WP_001645724.1;Parent=gene-C9E94_RS08495;Dbxref=GenBank:WP_001645724.1;Name=WP_001645724.1;gbkey=CDS;gene=hin;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461699.1;locus_tag=C9E94_RS08495;product=flagellar phase variation DNA invertase Hin;protein_id=WP_001645724.1;transl_table=11
NZ_PYJR01000062.1	RefSeq	gene	69926	70058	.	+	.	ID=gene-C9E94_RS08500;Name=C9E94_RS08500;end_range=70058,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08500;old_locus_tag=C9E94_08690;partial=true
NZ_PYJR01000062.1	Protein Homology	CDS	69926	70058	.	+	0	ID=cds-WP_439895940.1;Parent=gene-C9E94_RS08500;Dbxref=GenBank:WP_439895940.1;Name=WP_439895940.1;Ontology_term=GO:0071973,GO:0005198;end_range=70058,.;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460912.1;locus_tag=C9E94_RS08500;partial=true;product=flagellin N-terminal helical domain-containing protein;protein_id=WP_439895940.1;transl_table=11
##sequence-region NZ_PYJR01000137.1 1 65221
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000137.1	RefSeq	region	1	65221	.	+	.	ID=NZ_PYJR01000137.1:1..65221;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000137.1	RefSeq	gene	285	2246	.	-	.	ID=gene-C9E94_RS22375;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=C9E94_RS22375;old_locus_tag=C9E94_22970
NZ_PYJR01000137.1	Protein Homology	CDS	285	2246	.	-	0	ID=cds-WP_135401238.1;Parent=gene-C9E94_RS22375;Dbxref=GenBank:WP_135401238.1;Name=WP_135401238.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461414.1;locus_tag=C9E94_RS22375;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_135401238.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	2432	4132	.	+	.	ID=gene-C9E94_RS22380;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=C9E94_RS22380;old_locus_tag=C9E94_22980
NZ_PYJR01000137.1	Protein Homology	CDS	2432	4132	.	+	0	ID=cds-WP_023203848.1;Parent=gene-C9E94_RS22380;Dbxref=GenBank:WP_023203848.1;Name=WP_023203848.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461415.1;locus_tag=C9E94_RS22380;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_023203848.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	4317	7430	.	+	.	ID=gene-C9E94_RS22385;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=C9E94_RS22385;old_locus_tag=C9E94_22985
NZ_PYJR01000137.1	Protein Homology	CDS	4317	7430	.	+	0	ID=cds-WP_001263076.1;Parent=gene-C9E94_RS22385;Dbxref=GenBank:WP_001263076.1;Name=WP_001263076.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461416.1;locus_tag=C9E94_RS22385;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_001263076.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	7532	7591	.	-	.	ID=gene-C9E94_RS22390;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=C9E94_RS22390;old_locus_tag=C9E94_22990
NZ_PYJR01000137.1	Protein Homology	CDS	7532	7591	.	-	0	ID=cds-WP_001386977.1;Parent=gene-C9E94_RS22390;Dbxref=GenBank:WP_001386977.1;Name=WP_001386977.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=C9E94_RS22390;product=protein YpfM;protein_id=WP_001386977.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	8004	8360	.	+	.	ID=gene-C9E94_RS22395;Name=C9E94_RS22395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22395;old_locus_tag=C9E94_22995
NZ_PYJR01000137.1	Protein Homology	CDS	8004	8360	.	+	0	ID=cds-WP_000631923.1;Parent=gene-C9E94_RS22395;Dbxref=GenBank:WP_000631923.1;Name=WP_000631923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461417.1;locus_tag=C9E94_RS22395;product=ArsC family reductase;protein_id=WP_000631923.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	8364	9491	.	+	.	ID=gene-C9E94_RS22400;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=C9E94_RS22400;old_locus_tag=C9E94_23000
NZ_PYJR01000137.1	Protein Homology	CDS	8364	9491	.	+	0	ID=cds-WP_001277825.1;Parent=gene-C9E94_RS22400;Dbxref=GenBank:WP_001277825.1;Name=WP_001277825.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=C9E94_RS22400;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_001277825.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	9519	9719	.	+	.	ID=gene-C9E94_RS22405;Name=C9E94_RS22405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22405;old_locus_tag=C9E94_23005
NZ_PYJR01000137.1	Protein Homology	CDS	9519	9719	.	+	0	ID=cds-WP_000383839.1;Parent=gene-C9E94_RS22405;Dbxref=GenBank:WP_000383839.1;Name=WP_000383839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461419.1;locus_tag=C9E94_RS22405;product=YpfN family protein;protein_id=WP_000383839.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	9746	11764	.	-	.	ID=gene-C9E94_RS22410;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=C9E94_RS22410;old_locus_tag=C9E94_23010
NZ_PYJR01000137.1	Protein Homology	CDS	9746	11764	.	-	0	ID=cds-WP_135401239.1;Parent=gene-C9E94_RS22410;Dbxref=GenBank:WP_135401239.1;Name=WP_135401239.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461420.1;locus_tag=C9E94_RS22410;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WP_135401239.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	11780	12643	.	-	.	ID=gene-C9E94_RS22415;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=C9E94_RS22415;old_locus_tag=C9E94_23015
NZ_PYJR01000137.1	Protein Homology	CDS	11780	12643	.	-	0	ID=cds-WP_135401240.1;Parent=gene-C9E94_RS22415;Dbxref=GenBank:WP_135401240.1;Name=WP_135401240.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461421.1;locus_tag=C9E94_RS22415;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_135401240.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	12774	13487	.	-	.	ID=gene-C9E94_RS22420;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=C9E94_RS22420;old_locus_tag=C9E94_23020
NZ_PYJR01000137.1	Protein Homology	CDS	12774	13487	.	-	0	ID=cds-WP_001171630.1;Parent=gene-C9E94_RS22420;Dbxref=GenBank:WP_001171630.1;Name=WP_001171630.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=C9E94_RS22420;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001171630.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	13662	14696	.	-	.	ID=gene-C9E94_RS22425;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=C9E94_RS22425;old_locus_tag=C9E94_23025
NZ_PYJR01000137.1	Protein Homology	CDS	13662	14696	.	-	0	ID=cds-WP_000331873.1;Parent=gene-C9E94_RS22425;Dbxref=GenBank:WP_000331873.1;Name=WP_000331873.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461423.1;locus_tag=C9E94_RS22425;product=outer membrane protein assembly factor BamC;protein_id=WP_000331873.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	14713	15591	.	-	.	ID=gene-C9E94_RS22430;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=C9E94_RS22430;old_locus_tag=C9E94_23030
NZ_PYJR01000137.1	Protein Homology	CDS	14713	15591	.	-	0	ID=cds-WP_000494020.1;Parent=gene-C9E94_RS22430;Dbxref=GenBank:WP_000494020.1;Name=WP_000494020.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=C9E94_RS22430;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_000494020.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	15737	16309	.	+	.	ID=gene-C9E94_RS22435;Name=C9E94_RS22435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22435;old_locus_tag=C9E94_23035
NZ_PYJR01000137.1	Protein Homology	CDS	15737	16309	.	+	0	ID=cds-WP_000189061.1;Parent=gene-C9E94_RS22435;Dbxref=GenBank:WP_000189061.1;Name=WP_000189061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=C9E94_RS22435;product=glycine cleavage system transcriptional repressor;protein_id=WP_000189061.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	16309	16779	.	+	.	ID=gene-C9E94_RS22440;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=C9E94_RS22440;old_locus_tag=C9E94_23040
NZ_PYJR01000137.1	Protein Homology	CDS	16309	16779	.	+	0	ID=cds-WP_001068686.1;Parent=gene-C9E94_RS22440;Dbxref=GenBank:WP_001068686.1;Name=WP_001068686.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461426.1;locus_tag=C9E94_RS22440;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001068686.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	16826	17965	.	-	.	ID=gene-C9E94_RS22445;Name=C9E94_RS22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22445;old_locus_tag=C9E94_23045
NZ_PYJR01000137.1	Protein Homology	CDS	16826	17965	.	-	0	ID=cds-WP_000706377.1;Parent=gene-C9E94_RS22445;Dbxref=GenBank:WP_000706377.1;Name=WP_000706377.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000706371.1;locus_tag=C9E94_RS22445;product=glycerate kinase;protein_id=WP_000706377.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	17971	19239	.	-	.	ID=gene-C9E94_RS22450;Name=C9E94_RS22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22450;old_locus_tag=C9E94_23050
NZ_PYJR01000137.1	Protein Homology	CDS	17971	19239	.	-	0	ID=cds-WP_000200859.1;Parent=gene-C9E94_RS22450;Dbxref=GenBank:WP_000200859.1;Name=WP_000200859.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090684.1;locus_tag=C9E94_RS22450;product=GntP family permease;protein_id=WP_000200859.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	19307	20494	.	-	.	ID=gene-C9E94_RS22455;Name=C9E94_RS22455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22455;old_locus_tag=C9E94_23055
NZ_PYJR01000137.1	Protein Homology	CDS	19307	20494	.	-	0	ID=cds-WP_080170040.1;Parent=gene-C9E94_RS22455;Dbxref=GenBank:WP_080170040.1;Name=WP_080170040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667973.1;locus_tag=C9E94_RS22455;product=sugar diacid recognition domain-containing protein;protein_id=WP_080170040.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	20771	21838	.	-	.	ID=gene-C9E94_RS22460;Name=C9E94_RS22460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22460;old_locus_tag=C9E94_23060
NZ_PYJR01000137.1	Protein Homology	CDS	20771	21838	.	-	0	ID=cds-WP_000892056.1;Parent=gene-C9E94_RS22460;Dbxref=GenBank:WP_000892056.1;Name=WP_000892056.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461428.1;locus_tag=C9E94_RS22460;product=AI-2E family transporter;protein_id=WP_000892056.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	22046	23509	.	+	.	ID=gene-C9E94_RS22465;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=C9E94_RS22465;old_locus_tag=C9E94_23065
NZ_PYJR01000137.1	Protein Homology	CDS	22046	23509	.	+	0	ID=cds-WP_000489630.1;Parent=gene-C9E94_RS22465;Dbxref=GenBank:WP_000489630.1;Name=WP_000489630.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461429.1;locus_tag=C9E94_RS22465;product=beta-barrel assembly-enhancing protease;protein_id=WP_000489630.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	23549	23908	.	+	.	ID=gene-C9E94_RS22470;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=C9E94_RS22470;old_locus_tag=C9E94_23070
NZ_PYJR01000137.1	Protein Homology	CDS	23549	23908	.	+	0	ID=cds-WP_000132648.1;Parent=gene-C9E94_RS22470;Dbxref=GenBank:WP_000132648.1;Name=WP_000132648.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461430.1;locus_tag=C9E94_RS22470;product=arsenate reductase (glutaredoxin);protein_id=WP_000132648.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	23935	24636	.	-	.	ID=gene-C9E94_RS22475;Name=C9E94_RS22475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22475;old_locus_tag=C9E94_23075
NZ_PYJR01000137.1	Protein Homology	CDS	23935	24636	.	-	0	ID=cds-WP_061835882.1;Parent=gene-C9E94_RS22475;Dbxref=GenBank:WP_061835882.1;Name=WP_061835882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=C9E94_RS22475;product=DnaA inactivator Hda;protein_id=WP_061835882.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	24731	26020	.	-	.	ID=gene-C9E94_RS22480;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=C9E94_RS22480;old_locus_tag=C9E94_23080
NZ_PYJR01000137.1	Protein Homology	CDS	24731	26020	.	-	0	ID=cds-WP_000198344.1;Parent=gene-C9E94_RS22480;Dbxref=GenBank:WP_000198344.1;Name=WP_000198344.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461432.1;locus_tag=C9E94_RS22480;product=uracil permease;protein_id=WP_000198344.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	26108	26734	.	-	.	ID=gene-C9E94_RS22485;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=C9E94_RS22485;old_locus_tag=C9E94_23085
NZ_PYJR01000137.1	Protein Homology	CDS	26108	26734	.	-	0	ID=cds-WP_000706208.1;Parent=gene-C9E94_RS22485;Dbxref=GenBank:WP_000706208.1;Name=WP_000706208.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=C9E94_RS22485;product=uracil phosphoribosyltransferase;protein_id=WP_000706208.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	27148	28185	.	+	.	ID=gene-C9E94_RS22490;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=C9E94_RS22490;old_locus_tag=C9E94_23090
NZ_PYJR01000137.1	Protein Homology	CDS	27148	28185	.	+	0	ID=cds-WP_000130475.1;Parent=gene-C9E94_RS22490;Dbxref=GenBank:WP_000130475.1;Name=WP_000130475.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656828.1;locus_tag=C9E94_RS22490;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_000130475.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	28185	28823	.	+	.	ID=gene-C9E94_RS22495;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=C9E94_RS22495;old_locus_tag=C9E94_23095
NZ_PYJR01000137.1	Protein Homology	CDS	28185	28823	.	+	0	ID=cds-WP_135401241.1;Parent=gene-C9E94_RS22495;Dbxref=GenBank:WP_135401241.1;Name=WP_135401241.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461435.1;locus_tag=C9E94_RS22495;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_135401241.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	29012	31078	.	+	.	ID=gene-C9E94_RS22500;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=C9E94_RS22500;old_locus_tag=C9E94_23100
NZ_PYJR01000137.1	Protein Homology	CDS	29012	31078	.	+	0	ID=cds-WP_000529555.1;Parent=gene-C9E94_RS22500;Dbxref=GenBank:WP_000529555.1;Name=WP_000529555.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461436.1;locus_tag=C9E94_RS22500;product=polyphosphate kinase 1;protein_id=WP_000529555.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	31083	32624	.	+	.	ID=gene-C9E94_RS22505;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=C9E94_RS22505;old_locus_tag=C9E94_23105
NZ_PYJR01000137.1	Protein Homology	CDS	31083	32624	.	+	0	ID=cds-WP_135401247.1;Parent=gene-C9E94_RS22505;Dbxref=GenBank:WP_135401247.1;Name=WP_135401247.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461437.1;locus_tag=C9E94_RS22505;product=exopolyphosphatase;protein_id=WP_135401247.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	32660	34873	.	-	.	ID=gene-C9E94_RS22510;Name=C9E94_RS22510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22510;old_locus_tag=C9E94_23110
NZ_PYJR01000137.1	Protein Homology	CDS	32660	34873	.	-	0	ID=cds-WP_000773648.1;Parent=gene-C9E94_RS22510;Dbxref=GenBank:WP_000773648.1;Name=WP_000773648.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461438.1;locus_tag=C9E94_RS22510;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_000773648.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	34970	35107	.	-	.	ID=gene-C9E94_RS22515;Name=C9E94_RS22515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22515;old_locus_tag=C9E94_23115
NZ_PYJR01000137.1	Protein Homology	CDS	34970	35107	.	-	0	ID=cds-WP_001540598.1;Parent=gene-C9E94_RS22515;Dbxref=GenBank:WP_001540598.1;Name=WP_001540598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448898.1;locus_tag=C9E94_RS22515;product=hypothetical protein;protein_id=WP_001540598.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	35286	35477	.	+	.	ID=gene-C9E94_RS22520;Name=C9E94_RS22520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22520;old_locus_tag=C9E94_23120
NZ_PYJR01000137.1	Protein Homology	CDS	35286	35477	.	+	0	ID=cds-WP_000075924.1;Parent=gene-C9E94_RS22520;Dbxref=GenBank:WP_000075924.1;Name=WP_000075924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461441.1;locus_tag=C9E94_RS22520;product=YfgG family protein;protein_id=WP_000075924.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	pseudogene	35556	35699	.	-	.	ID=gene-C9E94_RS23720;Name=C9E94_RS23720;end_range=35699,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23720;partial=true;pseudo=true
NZ_PYJR01000137.1	Protein Homology	CDS	35556	35699	.	-	0	ID=cds-C9E94_RS23720;Parent=gene-C9E94_RS23720;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=35699,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448901.1;locus_tag=C9E94_RS23720;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYJR01000137.1	RefSeq	pseudogene	35958	36179	.	+	.	ID=gene-C9E94_RS23820;Name=C9E94_RS23820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23820;partial=true;pseudo=true;start_range=.,35958
NZ_PYJR01000137.1	Protein Homology	CDS	35958	36179	.	+	0	ID=cds-C9E94_RS23820;Parent=gene-C9E94_RS23820;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_125368327.1;locus_tag=C9E94_RS23820;partial=true;product=STM2901 family protein;pseudo=true;start_range=.,35958;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	36164	36493	.	+	.	ID=gene-C9E94_RS22530;Name=C9E94_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22530;old_locus_tag=C9E94_23130
NZ_PYJR01000137.1	Protein Homology	CDS	36164	36493	.	+	0	ID=cds-WP_023994424.1;Parent=gene-C9E94_RS22530;Dbxref=GenBank:WP_023994424.1;Name=WP_023994424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461443.1;locus_tag=C9E94_RS22530;product=DUF1493 family protein;protein_id=WP_023994424.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	pseudogene	36570	36889	.	-	.	ID=gene-C9E94_RS22535;Name=C9E94_RS22535;end_range=36889,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS22535;old_locus_tag=C9E94_23135;partial=true;pseudo=true;start_range=.,36570
NZ_PYJR01000137.1	Protein Homology	CDS	36570	36889	.	-	0	ID=cds-C9E94_RS22535;Parent=gene-C9E94_RS22535;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=36889,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611342.1;locus_tag=C9E94_RS22535;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,36570;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	37025	38602	.	-	.	ID=gene-C9E94_RS22540;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=C9E94_RS22540;old_locus_tag=C9E94_23140
NZ_PYJR01000137.1	Protein Homology	CDS	37025	38602	.	-	0	ID=cds-WP_135401242.1;Parent=gene-C9E94_RS22540;Dbxref=GenBank:WP_135401242.1;Name=WP_135401242.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=C9E94_RS22540;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_135401242.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	38672	40138	.	-	.	ID=gene-C9E94_RS22545;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=C9E94_RS22545;old_locus_tag=C9E94_23145
NZ_PYJR01000137.1	Protein Homology	CDS	38672	40138	.	-	0	ID=cds-WP_000944174.1;Parent=gene-C9E94_RS22545;Dbxref=GenBank:WP_000944174.1;Name=WP_000944174.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=C9E94_RS22545;product=IMP dehydrogenase;protein_id=WP_000944174.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	40299	41648	.	+	.	ID=gene-C9E94_RS22550;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=C9E94_RS22550;old_locus_tag=C9E94_23150
NZ_PYJR01000137.1	Protein Homology	CDS	40299	41648	.	+	0	ID=cds-WP_020899077.1;Parent=gene-C9E94_RS22550;Dbxref=GenBank:WP_020899077.1;Name=WP_020899077.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461447.1;locus_tag=C9E94_RS22550;product=exodeoxyribonuclease VII large subunit;protein_id=WP_020899077.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	41809	47952	.	-	.	ID=gene-C9E94_RS22555;Name=shdA;gbkey=Gene;gene=shdA;gene_biotype=protein_coding;locus_tag=C9E94_RS22555;old_locus_tag=C9E94_23155
NZ_PYJR01000137.1	Protein Homology	CDS	41809	47952	.	-	0	ID=cds-WP_135401243.1;Parent=gene-C9E94_RS22555;Dbxref=GenBank:WP_135401243.1;Name=WP_135401243.1;Ontology_term=GO:0019867;gbkey=CDS;gene=shdA;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835909.1;locus_tag=C9E94_RS22555;product=fibronectin-binding autotransporter adhesin ShdA;protein_id=WP_135401243.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	pseudogene	48512	48612	.	-	.	ID=gene-C9E94_RS23825;Name=C9E94_RS23825;end_range=48612,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23825;partial=true;pseudo=true
NZ_PYJR01000137.1	Protein Homology	CDS	48512	48612	.	-	0	ID=cds-C9E94_RS23825;Parent=gene-C9E94_RS23825;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=48612,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_309258417.1;locus_tag=C9E94_RS23825;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	48613	55920	.	-	.	ID=gene-C9E94_RS22565;Name=ratB;gbkey=Gene;gene=ratB;gene_biotype=protein_coding;locus_tag=C9E94_RS22565;old_locus_tag=C9E94_23160
NZ_PYJR01000137.1	Protein Homology	CDS	48613	55920	.	-	0	ID=cds-WP_135401244.1;Parent=gene-C9E94_RS22565;Dbxref=GenBank:WP_135401244.1;Name=WP_135401244.1;gbkey=CDS;gene=ratB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=C9E94_RS22565;product=DUF823/DUF824 repeat adhesin RatB;protein_id=WP_135401244.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	56086	61689	.	-	.	ID=gene-C9E94_RS22570;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=C9E94_RS22570;old_locus_tag=C9E94_23165
NZ_PYJR01000137.1	Protein Homology	CDS	56086	61689	.	-	0	ID=cds-WP_135401245.1;Parent=gene-C9E94_RS22570;Dbxref=GenBank:WP_135401245.1;Name=WP_135401245.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461450.1;locus_tag=C9E94_RS22570;product=DUF823/DUF824 repeat adhesin RatA;protein_id=WP_135401245.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	61809	62768	.	-	.	ID=gene-C9E94_RS22575;Name=C9E94_RS22575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22575;old_locus_tag=C9E94_23170
NZ_PYJR01000137.1	Protein Homology	CDS	61809	62768	.	-	0	ID=cds-WP_001149066.1;Parent=gene-C9E94_RS22575;Dbxref=GenBank:WP_001149066.1;Name=WP_001149066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461451.1;locus_tag=C9E94_RS22575;product=SinI family autotransporter-associated protein;protein_id=WP_001149066.1;transl_table=11
NZ_PYJR01000137.1	RefSeq	gene	62826	65018	.	-	.	ID=gene-C9E94_RS22580;Name=sinH;gbkey=Gene;gene=sinH;gene_biotype=protein_coding;locus_tag=C9E94_RS22580;old_locus_tag=C9E94_23175
NZ_PYJR01000137.1	Protein Homology	CDS	62826	65018	.	-	0	ID=cds-WP_135401246.1;Parent=gene-C9E94_RS22580;Dbxref=GenBank:WP_135401246.1;Name=WP_135401246.1;gbkey=CDS;gene=sinH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=C9E94_RS22580;product=intimin-like inverse autotransporter SinH;protein_id=WP_135401246.1;transl_table=11
##sequence-region NZ_PYJR01000042.1 1 65048
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000042.1	RefSeq	region	1	65048	.	+	.	ID=NZ_PYJR01000042.1:1..65048;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000042.1	RefSeq	gene	300	1706	.	+	.	ID=gene-C9E94_RS04980;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=C9E94_RS04980;old_locus_tag=C9E94_05120
NZ_PYJR01000042.1	Protein Homology	CDS	300	1706	.	+	0	ID=cds-WP_000043530.1;Parent=gene-C9E94_RS04980;Dbxref=GenBank:WP_000043530.1;Name=WP_000043530.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461026.1;locus_tag=C9E94_RS04980;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_000043530.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	1943	3109	.	+	.	ID=gene-C9E94_RS04990;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=C9E94_RS04990;old_locus_tag=C9E94_05130
NZ_PYJR01000042.1	Protein Homology	CDS	1943	3109	.	+	0	ID=cds-WP_000704825.1;Parent=gene-C9E94_RS04990;Dbxref=GenBank:WP_000704825.1;Name=WP_000704825.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461025.1;locus_tag=C9E94_RS04990;product=UDP-glucose 6-dehydrogenase;protein_id=WP_000704825.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	3252	4235	.	+	.	ID=gene-C9E94_RS04995;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=C9E94_RS04995;old_locus_tag=C9E94_05135
NZ_PYJR01000042.1	Protein Homology	CDS	3252	4235	.	+	0	ID=cds-WP_023195129.1;Parent=gene-C9E94_RS04995;Dbxref=GenBank:WP_023195129.1;Name=WP_023195129.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461024.1;locus_tag=C9E94_RS04995;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WP_023195129.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	4331	4942	.	-	.	ID=gene-C9E94_RS05000;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=C9E94_RS05000;old_locus_tag=C9E94_05140
NZ_PYJR01000042.1	Protein Homology	CDS	4331	4942	.	-	0	ID=cds-WP_000954846.1;Parent=gene-C9E94_RS05000;Dbxref=GenBank:WP_000954846.1;Name=WP_000954846.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461023.1;locus_tag=C9E94_RS05000;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_000954846.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	4936	5712	.	-	.	ID=gene-C9E94_RS05005;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=C9E94_RS05005;old_locus_tag=C9E94_05145
NZ_PYJR01000042.1	Protein Homology	CDS	4936	5712	.	-	0	ID=cds-WP_000880125.1;Parent=gene-C9E94_RS05005;Dbxref=GenBank:WP_000880125.1;Name=WP_000880125.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461022.1;locus_tag=C9E94_RS05005;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_000880125.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	5694	6431	.	-	.	ID=gene-C9E94_RS05010;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=C9E94_RS05010;old_locus_tag=C9E94_05150
NZ_PYJR01000042.1	Protein Homology	CDS	5694	6431	.	-	0	ID=cds-WP_000586409.1;Parent=gene-C9E94_RS05010;Dbxref=GenBank:WP_000586409.1;Name=WP_000586409.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461021.1;locus_tag=C9E94_RS05010;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_000586409.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	6431	7021	.	-	.	ID=gene-C9E94_RS05015;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=C9E94_RS05015;old_locus_tag=C9E94_05155
NZ_PYJR01000042.1	Protein Homology	CDS	6431	7021	.	-	0	ID=cds-WP_135400847.1;Parent=gene-C9E94_RS05015;Dbxref=GenBank:WP_135400847.1;Name=WP_135400847.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=C9E94_RS05015;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_135400847.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	7021	8088	.	-	.	ID=gene-C9E94_RS05020;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=C9E94_RS05020;old_locus_tag=C9E94_05160
NZ_PYJR01000042.1	Protein Homology	CDS	7021	8088	.	-	0	ID=cds-WP_000080044.1;Parent=gene-C9E94_RS05020;Dbxref=GenBank:WP_000080044.1;Name=WP_000080044.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461019.1;locus_tag=C9E94_RS05020;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_000080044.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	8085	9164	.	-	.	ID=gene-C9E94_RS05025;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=C9E94_RS05025;old_locus_tag=C9E94_05165
NZ_PYJR01000042.1	Protein Homology	CDS	8085	9164	.	-	0	ID=cds-WP_000102710.1;Parent=gene-C9E94_RS05025;Dbxref=GenBank:WP_000102710.1;Name=WP_000102710.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461018.1;locus_tag=C9E94_RS05025;product=histidinol-phosphate transaminase;protein_id=WP_000102710.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	9161	10465	.	-	.	ID=gene-C9E94_RS05030;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=C9E94_RS05030;old_locus_tag=C9E94_05170
NZ_PYJR01000042.1	Protein Homology	CDS	9161	10465	.	-	0	ID=cds-WP_135400848.1;Parent=gene-C9E94_RS05030;Dbxref=GenBank:WP_135400848.1;Name=WP_135400848.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461017.1;locus_tag=C9E94_RS05030;product=histidinol dehydrogenase;protein_id=WP_135400848.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	10568	11467	.	-	.	ID=gene-C9E94_RS05035;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=C9E94_RS05035;old_locus_tag=C9E94_05175
NZ_PYJR01000042.1	Protein Homology	CDS	10568	11467	.	-	0	ID=cds-WP_000886600.1;Parent=gene-C9E94_RS05035;Dbxref=GenBank:WP_000886600.1;Name=WP_000886600.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=C9E94_RS05035;product=ATP phosphoribosyltransferase;protein_id=WP_000886600.1;transl_table=11
NZ_PYJR01000042.1	cmsearch	sequence_feature	11514	11637	.	-	.	ID=id-NZ_PYJR01000042.1:11514..11637;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PYJR01000042.1	RefSeq	gene	11613	11663	.	-	.	ID=gene-C9E94_RS05040;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=C9E94_RS05040;old_locus_tag=C9E94_05180
NZ_PYJR01000042.1	Protein Homology	CDS	11613	11663	.	-	0	ID=cds-WP_001364200.1;Parent=gene-C9E94_RS05040;Dbxref=GenBank:WP_001364200.1;Name=WP_001364200.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=C9E94_RS05040;product=his operon leader peptide;protein_id=WP_001364200.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	11826	12650	.	+	.	ID=gene-C9E94_RS05045;Name=C9E94_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05045;old_locus_tag=C9E94_05185
NZ_PYJR01000042.1	Protein Homology	CDS	11826	12650	.	+	0	ID=cds-WP_000754712.1;Parent=gene-C9E94_RS05045;Dbxref=GenBank:WP_000754712.1;Name=WP_000754712.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461015.1;locus_tag=C9E94_RS05045;product=SDR family oxidoreductase;protein_id=WP_000754712.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	12696	13610	.	+	.	ID=gene-C9E94_RS05050;Name=C9E94_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05050;old_locus_tag=C9E94_05190
NZ_PYJR01000042.1	Protein Homology	CDS	12696	13610	.	+	0	ID=cds-WP_135400849.1;Parent=gene-C9E94_RS05050;Dbxref=GenBank:WP_135400849.1;Name=WP_135400849.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461014.1;locus_tag=C9E94_RS05050;product=LysR family transcriptional regulator;protein_id=WP_135400849.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	13844	13906	.	+	.	ID=gene-C9E94_RS05055;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=C9E94_RS05055;old_locus_tag=C9E94_05195
NZ_PYJR01000042.1	Protein Homology	CDS	13844	13906	.	+	0	ID=cds-WP_096335044.1;Parent=gene-C9E94_RS05055;Dbxref=GenBank:WP_096335044.1;Name=WP_096335044.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=C9E94_RS05055;product=membrane protein YoeI;protein_id=WP_096335044.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	13896	15254	.	+	.	ID=gene-C9E94_RS05060;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=C9E94_RS05060;old_locus_tag=C9E94_05200
NZ_PYJR01000042.1	Protein Homology	CDS	13896	15254	.	+	0	ID=cds-WP_001519005.1;Parent=gene-C9E94_RS05060;Dbxref=GenBank:WP_001519005.1;Name=WP_001519005.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=C9E94_RS05060;product=putrescine/proton symporter PlaP;protein_id=WP_001519005.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	15390	16820	.	-	.	ID=gene-C9E94_RS05065;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=C9E94_RS05065;old_locus_tag=C9E94_05205
NZ_PYJR01000042.1	Protein Homology	CDS	15390	16820	.	-	0	ID=cds-WP_000216702.1;Parent=gene-C9E94_RS05065;Dbxref=GenBank:WP_000216702.1;Name=WP_000216702.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461012.1;locus_tag=C9E94_RS05065;product=exodeoxyribonuclease I;protein_id=WP_000216702.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	pseudogene	16956	17033	.	+	.	ID=gene-C9E94_RS23585;Name=C9E94_RS23585;end_range=17033,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23585;partial=true;pseudo=true
NZ_PYJR01000042.1	Protein Homology	CDS	16956	17033	.	+	0	ID=cds-C9E94_RS23585;Parent=gene-C9E94_RS23585;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=17033,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226536.1;locus_tag=C9E94_RS23585;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	17163	19511	.	-	.	ID=gene-C9E94_RS05070;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=C9E94_RS05070;old_locus_tag=C9E94_05210
NZ_PYJR01000042.1	Protein Homology	CDS	17163	19511	.	-	0	ID=cds-WP_023197844.1;Parent=gene-C9E94_RS05070;Dbxref=GenBank:WP_023197844.1;Name=WP_023197844.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=C9E94_RS05070;product=SPI-1 type III secretion system effector HECT-type E3 ubiquitin transferase SopA;protein_id=WP_023197844.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	pseudogene	19778	19870	.	+	.	ID=gene-C9E94_RS05075;Name=C9E94_RS05075;end_range=19870,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS05075;old_locus_tag=C9E94_05220;partial=true;pseudo=true;start_range=.,19778
NZ_PYJR01000042.1	Protein Homology	CDS	19778	19870	.	+	0	ID=cds-C9E94_RS05075;Parent=gene-C9E94_RS05075;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=19870,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=C9E94_RS05075;partial=true;product=heavy metal-binding domain-containing protein;pseudo=true;start_range=.,19778;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	20130	22406	.	+	.	ID=gene-C9E94_RS05080;Name=phsA;gbkey=Gene;gene=phsA;gene_biotype=protein_coding;locus_tag=C9E94_RS05080;old_locus_tag=C9E94_05225
NZ_PYJR01000042.1	Protein Homology	CDS	20130	22406	.	+	0	ID=cds-WP_108631471.1;Parent=gene-C9E94_RS05080;Dbxref=GenBank:WP_108631471.1;Name=WP_108631471.1;Ontology_term=GO:0016491,GO:0043546,GO:0051539;gbkey=CDS;gene=phsA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461010.1;locus_tag=C9E94_RS05080;product=thiosulfate reductase PhsA;protein_id=WP_108631471.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	22421	22999	.	+	.	ID=gene-C9E94_RS05085;Name=phsB;gbkey=Gene;gene=phsB;gene_biotype=protein_coding;locus_tag=C9E94_RS05085;old_locus_tag=C9E94_05230
NZ_PYJR01000042.1	Protein Homology	CDS	22421	22999	.	+	0	ID=cds-WP_001016236.1;Parent=gene-C9E94_RS05085;Dbxref=GenBank:WP_001016236.1;Name=WP_001016236.1;gbkey=CDS;gene=phsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461009.1;locus_tag=C9E94_RS05085;product=thiosulfate reductase electron transport protein PhsB;protein_id=WP_001016236.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	22996	23760	.	+	.	ID=gene-C9E94_RS05090;Name=phsC;gbkey=Gene;gene=phsC;gene_biotype=protein_coding;locus_tag=C9E94_RS05090;old_locus_tag=C9E94_05235
NZ_PYJR01000042.1	Protein Homology	CDS	22996	23760	.	+	0	ID=cds-WP_001092553.1;Parent=gene-C9E94_RS05090;Dbxref=GenBank:WP_001092553.1;Name=WP_001092553.1;gbkey=CDS;gene=phsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461008.1;locus_tag=C9E94_RS05090;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_001092553.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	23884	25056	.	+	.	ID=gene-C9E94_RS05095;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=C9E94_RS05095;old_locus_tag=C9E94_05240
NZ_PYJR01000042.1	Protein Homology	CDS	23884	25056	.	+	0	ID=cds-WP_000925042.1;Parent=gene-C9E94_RS05095;Dbxref=GenBank:WP_000925042.1;Name=WP_000925042.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=C9E94_RS05095;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_000925042.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	25209	25676	.	+	.	ID=gene-C9E94_RS05100;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=C9E94_RS05100;old_locus_tag=C9E94_05245
NZ_PYJR01000042.1	Protein Homology	CDS	25209	25676	.	+	0	ID=cds-WP_000384326.1;Parent=gene-C9E94_RS05100;Dbxref=GenBank:WP_000384326.1;Name=WP_000384326.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461006.1;locus_tag=C9E94_RS05100;product=DNA gyrase inhibitor SbmC;protein_id=WP_000384326.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	25795	26853	.	+	.	ID=gene-C9E94_RS05105;Name=C9E94_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05105;old_locus_tag=C9E94_05250
NZ_PYJR01000042.1	Protein Homology	CDS	25795	26853	.	+	0	ID=cds-WP_001200854.1;Parent=gene-C9E94_RS05105;Dbxref=GenBank:WP_001200854.1;Name=WP_001200854.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461005.1;locus_tag=C9E94_RS05105;product=FUSC family protein;protein_id=WP_001200854.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	27098	27433	.	+	.	ID=gene-C9E94_RS05110;Name=C9E94_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05110;old_locus_tag=C9E94_05255
NZ_PYJR01000042.1	Protein Homology	CDS	27098	27433	.	+	0	ID=cds-WP_000450405.1;Parent=gene-C9E94_RS05110;Dbxref=GenBank:WP_000450405.1;Name=WP_000450405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461004.1;locus_tag=C9E94_RS05110;product=DUF496 family protein;protein_id=WP_000450405.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	27467	28333	.	-	.	ID=gene-C9E94_RS05115;Name=pduX;gbkey=Gene;gene=pduX;gene_biotype=protein_coding;locus_tag=C9E94_RS05115;old_locus_tag=C9E94_05260
NZ_PYJR01000042.1	Protein Homology	CDS	27467	28333	.	-	0	ID=cds-WP_001533066.1;Parent=gene-C9E94_RS05115;Dbxref=GenBank:WP_001533066.1;Name=WP_001533066.1;gbkey=CDS;gene=pduX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632997.1;locus_tag=C9E94_RS05115;product=L-threonine kinase PduX;protein_id=WP_001533066.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	28427	29641	.	-	.	ID=gene-C9E94_RS05120;Name=pduW;gbkey=Gene;gene=pduW;gene_biotype=protein_coding;locus_tag=C9E94_RS05120;old_locus_tag=C9E94_05265
NZ_PYJR01000042.1	Protein Homology	CDS	28427	29641	.	-	0	ID=cds-WP_000120647.1;Parent=gene-C9E94_RS05120;Dbxref=GenBank:WP_000120647.1;Name=WP_000120647.1;gbkey=CDS;gene=pduW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=C9E94_RS05120;product=propanediol utilization propionate kinase PduW;protein_id=WP_000120647.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	29626	30078	.	-	.	ID=gene-C9E94_RS05125;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=C9E94_RS05125;old_locus_tag=C9E94_05270
NZ_PYJR01000042.1	Protein Homology	CDS	29626	30078	.	-	0	ID=cds-WP_000826278.1;Parent=gene-C9E94_RS05125;Dbxref=GenBank:WP_000826278.1;Name=WP_000826278.1;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461001.1;locus_tag=C9E94_RS05125;product=propanediol utilization protein PduV;protein_id=WP_000826278.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	30083	30433	.	-	.	ID=gene-C9E94_RS05130;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=C9E94_RS05130;old_locus_tag=C9E94_05275
NZ_PYJR01000042.1	Protein Homology	CDS	30083	30433	.	-	0	ID=cds-WP_000441103.1;Parent=gene-C9E94_RS05130;Dbxref=GenBank:WP_000441103.1;Name=WP_000441103.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461000.1;locus_tag=C9E94_RS05130;product=propanediol utilization microcompartment protein PduU;protein_id=WP_000441103.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	30433	30987	.	-	.	ID=gene-C9E94_RS05135;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=C9E94_RS05135;old_locus_tag=C9E94_05280
NZ_PYJR01000042.1	Protein Homology	CDS	30433	30987	.	-	0	ID=cds-WP_000075772.1;Parent=gene-C9E94_RS05135;Dbxref=GenBank:WP_000075772.1;Name=WP_000075772.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=C9E94_RS05135;product=propanediol utilization microcompartment protein PduT;protein_id=WP_000075772.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	30990	32345	.	-	.	ID=gene-C9E94_RS05140;Name=pduS;gbkey=Gene;gene=pduS;gene_biotype=protein_coding;locus_tag=C9E94_RS05140;old_locus_tag=C9E94_05285
NZ_PYJR01000042.1	Protein Homology	CDS	30990	32345	.	-	0	ID=cds-WP_135400850.1;Parent=gene-C9E94_RS05140;Dbxref=GenBank:WP_135400850.1;Name=WP_135400850.1;gbkey=CDS;gene=pduS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=C9E94_RS05140;product=cobalamin reductase PduS;protein_id=WP_135400850.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	32342	33454	.	-	.	ID=gene-C9E94_RS05145;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=C9E94_RS05145;old_locus_tag=C9E94_05290
NZ_PYJR01000042.1	Protein Homology	CDS	32342	33454	.	-	0	ID=cds-WP_135400851.1;Parent=gene-C9E94_RS05145;Dbxref=GenBank:WP_135400851.1;Name=WP_135400851.1;gbkey=CDS;gene=pduQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460997.1;locus_tag=C9E94_RS05145;product=1-propanol dehydrogenase PduQ;protein_id=WP_135400851.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	33466	34860	.	-	.	ID=gene-C9E94_RS05150;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=C9E94_RS05150;old_locus_tag=C9E94_05295
NZ_PYJR01000042.1	Protein Homology	CDS	33466	34860	.	-	0	ID=cds-WP_001097671.1;Parent=gene-C9E94_RS05150;Dbxref=GenBank:WP_001097671.1;Name=WP_001097671.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460996.1;locus_tag=C9E94_RS05150;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=WP_001097671.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	34857	35867	.	-	.	ID=gene-C9E94_RS05155;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=protein_coding;locus_tag=C9E94_RS05155;old_locus_tag=C9E94_05300
NZ_PYJR01000042.1	Protein Homology	CDS	34857	35867	.	-	0	ID=cds-WP_080162804.1;Parent=gene-C9E94_RS05155;Dbxref=GenBank:WP_080162804.1;Name=WP_080162804.1;gbkey=CDS;gene=pduO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460995.1;locus_tag=C9E94_RS05155;product=two-domain cob(I)yrinic acid a%2Cc-diamide adenosyltransferase PduO;protein_id=WP_080162804.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	35877	36152	.	-	.	ID=gene-C9E94_RS05160;Name=pduN;gbkey=Gene;gene=pduN;gene_biotype=protein_coding;locus_tag=C9E94_RS05160;old_locus_tag=C9E94_05305
NZ_PYJR01000042.1	Protein Homology	CDS	35877	36152	.	-	0	ID=cds-WP_000549825.1;Parent=gene-C9E94_RS05160;Dbxref=GenBank:WP_000549825.1;Name=WP_000549825.1;gbkey=CDS;gene=pduN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228577.1;locus_tag=C9E94_RS05160;product=propanediol utilization microcompartment protein PduN;protein_id=WP_000549825.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	36156	36647	.	-	.	ID=gene-C9E94_RS05165;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=C9E94_RS05165;old_locus_tag=C9E94_05310
NZ_PYJR01000042.1	Protein Homology	CDS	36156	36647	.	-	0	ID=cds-WP_001012965.1;Parent=gene-C9E94_RS05165;Dbxref=GenBank:WP_001012965.1;Name=WP_001012965.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460993.1;locus_tag=C9E94_RS05165;product=propanediol utilization microcompartment protein PduM;protein_id=WP_001012965.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	36644	37276	.	-	.	ID=gene-C9E94_RS05170;Name=C9E94_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05170;old_locus_tag=C9E94_05315
NZ_PYJR01000042.1	Protein Homology	CDS	36644	37276	.	-	0	ID=cds-WP_000356711.1;Parent=gene-C9E94_RS05170;Dbxref=GenBank:WP_000356711.1;Name=WP_000356711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460992.1;locus_tag=C9E94_RS05170;product=phosphate propanoyltransferase;protein_id=WP_000356711.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	37276	37758	.	-	.	ID=gene-C9E94_RS05175;Name=pduK;gbkey=Gene;gene=pduK;gene_biotype=protein_coding;locus_tag=C9E94_RS05175;old_locus_tag=C9E94_05320
NZ_PYJR01000042.1	Protein Homology	CDS	37276	37758	.	-	0	ID=cds-WP_001284393.1;Parent=gene-C9E94_RS05175;Dbxref=GenBank:WP_001284393.1;Name=WP_001284393.1;gbkey=CDS;gene=pduK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460991.3;locus_tag=C9E94_RS05175;product=propanediol utilization microcompartment protein PduK;protein_id=WP_001284393.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	37762	38037	.	-	.	ID=gene-C9E94_RS05180;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=C9E94_RS05180;old_locus_tag=C9E94_05325
NZ_PYJR01000042.1	Protein Homology	CDS	37762	38037	.	-	0	ID=cds-WP_001057755.1;Parent=gene-C9E94_RS05180;Dbxref=GenBank:WP_001057755.1;Name=WP_001057755.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460990.1;locus_tag=C9E94_RS05180;product=propanediol utilization microcompartment protein PduJ;protein_id=WP_001057755.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	38056	38406	.	-	.	ID=gene-C9E94_RS05185;Name=pduH;gbkey=Gene;gene=pduH;gene_biotype=protein_coding;locus_tag=C9E94_RS05185;old_locus_tag=C9E94_05330
NZ_PYJR01000042.1	Protein Homology	CDS	38056	38406	.	-	0	ID=cds-WP_000377965.1;Parent=gene-C9E94_RS05185;Dbxref=GenBank:WP_000377965.1;Name=WP_000377965.1;gbkey=CDS;gene=pduH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460989.1;locus_tag=C9E94_RS05185;product=propanediol dehydratase reactivase beta subunit PduH;protein_id=WP_000377965.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	38396	40228	.	-	.	ID=gene-C9E94_RS05190;Name=pduG;gbkey=Gene;gene=pduG;gene_biotype=protein_coding;locus_tag=C9E94_RS05190;old_locus_tag=C9E94_05335
NZ_PYJR01000042.1	Protein Homology	CDS	38396	40228	.	-	0	ID=cds-WP_135400852.1;Parent=gene-C9E94_RS05190;Dbxref=GenBank:WP_135400852.1;Name=WP_135400852.1;gbkey=CDS;gene=pduG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=C9E94_RS05190;product=propanediol dehydratase reactivase alpha subunit PduG;protein_id=WP_135400852.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	40244	40765	.	-	.	ID=gene-C9E94_RS05195;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=C9E94_RS05195;old_locus_tag=C9E94_05340
NZ_PYJR01000042.1	Protein Homology	CDS	40244	40765	.	-	0	ID=cds-WP_001090597.1;Parent=gene-C9E94_RS05195;Dbxref=GenBank:WP_001090597.1;Name=WP_001090597.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460987.1;locus_tag=C9E94_RS05195;product=propanediol dehydratase small subunit PduE;protein_id=WP_001090597.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	40780	41454	.	-	.	ID=gene-C9E94_RS05200;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=C9E94_RS05200;old_locus_tag=C9E94_05345
NZ_PYJR01000042.1	Protein Homology	CDS	40780	41454	.	-	0	ID=cds-WP_000405051.1;Parent=gene-C9E94_RS05200;Dbxref=GenBank:WP_000405051.1;Name=WP_000405051.1;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460986.1;locus_tag=C9E94_RS05200;product=propanediol dehydratase medium subunit PduD;protein_id=WP_000405051.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	41465	43129	.	-	.	ID=gene-C9E94_RS05205;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=C9E94_RS05205;old_locus_tag=C9E94_05350
NZ_PYJR01000042.1	Protein Homology	CDS	41465	43129	.	-	0	ID=cds-WP_001256899.1;Parent=gene-C9E94_RS05205;Dbxref=GenBank:WP_001256899.1;Name=WP_001256899.1;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460985.1;locus_tag=C9E94_RS05205;product=propanediol dehydratase large subunit PduC;protein_id=WP_001256899.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	43148	43960	.	-	.	ID=gene-C9E94_RS05210;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=C9E94_RS05210;old_locus_tag=C9E94_05355
NZ_PYJR01000042.1	Protein Homology	CDS	43148	43960	.	-	0	ID=cds-WP_000097504.1;Parent=gene-C9E94_RS05210;Dbxref=GenBank:WP_000097504.1;Name=WP_000097504.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=pduB;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228567.1;locus_tag=C9E94_RS05210;product=propanediol utilization microcompartment protein PduB;protein_id=WP_000097504.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	43957	44241	.	-	.	ID=gene-C9E94_RS05215;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=C9E94_RS05215;old_locus_tag=C9E94_05360
NZ_PYJR01000042.1	Protein Homology	CDS	43957	44241	.	-	0	ID=cds-WP_001183618.1;Parent=gene-C9E94_RS05215;Dbxref=GenBank:WP_001183618.1;Name=WP_001183618.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460983.1;locus_tag=C9E94_RS05215;product=propanediol utilization microcompartment protein PduA;protein_id=WP_001183618.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	44766	45560	.	+	.	ID=gene-C9E94_RS05220;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=C9E94_RS05220;old_locus_tag=C9E94_05365
NZ_PYJR01000042.1	Protein Homology	CDS	44766	45560	.	+	0	ID=cds-WP_001000023.1;Parent=gene-C9E94_RS05220;Dbxref=GenBank:WP_001000023.1;Name=WP_001000023.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460982.1;locus_tag=C9E94_RS05220;product=propanediol diffusion facilitator PduF;protein_id=WP_001000023.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	45777	46688	.	+	.	ID=gene-C9E94_RS05225;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=protein_coding;locus_tag=C9E94_RS05225;old_locus_tag=C9E94_05370
NZ_PYJR01000042.1	Protein Homology	CDS	45777	46688	.	+	0	ID=cds-WP_000622326.1;Parent=gene-C9E94_RS05225;Dbxref=GenBank:WP_000622326.1;Name=WP_000622326.1;Ontology_term=GO:0009236,GO:0051144,GO:0003700,GO:0043565;gbkey=CDS;gene=pocR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,1%2C2-propanediol catabolic process|0051144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460981.1;locus_tag=C9E94_RS05225;product=transcriptional regulator PocR;protein_id=WP_000622326.1;transl_table=11
NZ_PYJR01000042.1	cmsearch	riboswitch	47014	47188	.	+	.	ID=id-NZ_PYJR01000042.1:47014..47188;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PYJR01000042.1	RefSeq	gene	47286	48665	.	+	.	ID=gene-C9E94_RS05230;Name=C9E94_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05230;old_locus_tag=C9E94_05375
NZ_PYJR01000042.1	Protein Homology	CDS	47286	48665	.	+	0	ID=cds-WP_000741254.1;Parent=gene-C9E94_RS05230;Dbxref=GenBank:WP_000741254.1;Name=WP_000741254.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460980.1;locus_tag=C9E94_RS05230;product=cobyrinate a%2Cc-diamide synthase;protein_id=WP_000741254.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	48662	49621	.	+	.	ID=gene-C9E94_RS05235;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=C9E94_RS05235;old_locus_tag=C9E94_05380
NZ_PYJR01000042.1	Protein Homology	CDS	48662	49621	.	+	0	ID=cds-WP_000153643.1;Parent=gene-C9E94_RS05235;Dbxref=GenBank:WP_000153643.1;Name=WP_000153643.1;Ontology_term=GO:0009236,GO:0048472,GO:0016020;gbkey=CDS;gene=cbiB;go_component=membrane|0016020||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460979.1;locus_tag=C9E94_RS05235;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WP_000153643.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	49632	50264	.	+	.	ID=gene-C9E94_RS05240;Name=C9E94_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05240;old_locus_tag=C9E94_05385
NZ_PYJR01000042.1	Protein Homology	CDS	49632	50264	.	+	0	ID=cds-WP_000558987.1;Parent=gene-C9E94_RS05240;Dbxref=GenBank:WP_000558987.1;Name=WP_000558987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460978.1;locus_tag=C9E94_RS05240;product=cobalt-precorrin-8 methylmutase;protein_id=WP_000558987.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	50264	51403	.	+	.	ID=gene-C9E94_RS05245;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=C9E94_RS05245;old_locus_tag=C9E94_05390
NZ_PYJR01000042.1	Protein Homology	CDS	50264	51403	.	+	0	ID=cds-WP_001292911.1;Parent=gene-C9E94_RS05245;Dbxref=GenBank:WP_001292911.1;Name=WP_001292911.1;Ontology_term=GO:0009236,GO:0005737;gbkey=CDS;gene=cbiD;go_component=cytoplasm|0005737||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460977.1;locus_tag=C9E94_RS05245;product=cobalt-precorrin-5B (C(1))-methyltransferase CbiD;protein_id=WP_001292911.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	51397	52002	.	+	.	ID=gene-C9E94_RS05250;Name=C9E94_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05250;old_locus_tag=C9E94_05395
NZ_PYJR01000042.1	Protein Homology	CDS	51397	52002	.	+	0	ID=cds-WP_000958835.1;Parent=gene-C9E94_RS05250;Dbxref=GenBank:WP_000958835.1;Name=WP_000958835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460976.1;locus_tag=C9E94_RS05250;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=WP_000958835.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	51992	52570	.	+	.	ID=gene-C9E94_RS05255;Name=C9E94_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05255;old_locus_tag=C9E94_05400
NZ_PYJR01000042.1	Protein Homology	CDS	51992	52570	.	+	0	ID=cds-WP_000650985.1;Parent=gene-C9E94_RS05255;Dbxref=GenBank:WP_000650985.1;Name=WP_000650985.1;Ontology_term=GO:0009236,GO:0008276;gbkey=CDS;go_function=protein methyltransferase activity|0008276||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460975.1;locus_tag=C9E94_RS05255;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=WP_000650985.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	52554	53327	.	+	.	ID=gene-C9E94_RS05260;Name=C9E94_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05260;old_locus_tag=C9E94_05405
NZ_PYJR01000042.1	Protein Homology	CDS	52554	53327	.	+	0	ID=cds-WP_000004866.1;Parent=gene-C9E94_RS05260;Dbxref=GenBank:WP_000004866.1;Name=WP_000004866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460974.1;locus_tag=C9E94_RS05260;product=cobalt-precorrin-4 methyltransferase;protein_id=WP_000004866.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	53308	54363	.	+	.	ID=gene-C9E94_RS05265;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=protein_coding;locus_tag=C9E94_RS05265;old_locus_tag=C9E94_05410
NZ_PYJR01000042.1	Protein Homology	CDS	53308	54363	.	+	0	ID=cds-WP_001098927.1;Parent=gene-C9E94_RS05265;Dbxref=GenBank:WP_001098927.1;Name=WP_001098927.1;gbkey=CDS;gene=cbiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460973.1;locus_tag=C9E94_RS05265;product=cobalt-precorrin 5A hydrolase;protein_id=WP_001098927.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	54363	55088	.	+	.	ID=gene-C9E94_RS05270;Name=C9E94_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05270;old_locus_tag=C9E94_05415
NZ_PYJR01000042.1	Protein Homology	CDS	54363	55088	.	+	0	ID=cds-WP_000953638.1;Parent=gene-C9E94_RS05270;Dbxref=GenBank:WP_000953638.1;Name=WP_000953638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460972.1;locus_tag=C9E94_RS05270;product=precorrin-3B C(17)-methyltransferase;protein_id=WP_000953638.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	55085	55876	.	+	.	ID=gene-C9E94_RS05275;Name=C9E94_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05275;old_locus_tag=C9E94_05420
NZ_PYJR01000042.1	Protein Homology	CDS	55085	55876	.	+	0	ID=cds-WP_001001983.1;Parent=gene-C9E94_RS05275;Dbxref=GenBank:WP_001001983.1;Name=WP_001001983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460971.1;locus_tag=C9E94_RS05275;product=cobalt-precorrin-6A reductase;protein_id=WP_001001983.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	55879	56673	.	+	.	ID=gene-C9E94_RS05280;Name=cbiK;gbkey=Gene;gene=cbiK;gene_biotype=protein_coding;locus_tag=C9E94_RS05280;old_locus_tag=C9E94_05425
NZ_PYJR01000042.1	Protein Homology	CDS	55879	56673	.	+	0	ID=cds-WP_000709777.1;Parent=gene-C9E94_RS05280;Dbxref=GenBank:WP_000709777.1;Name=WP_000709777.1;Ontology_term=GO:0006779,GO:0016852,GO:0046906;gbkey=CDS;gene=cbiK;go_function=sirohydrochlorin cobaltochelatase activity|0016852||IEA,tetrapyrrole binding|0046906||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460970.1;locus_tag=C9E94_RS05280;product=sirohydrochlorin cobaltochelatase;protein_id=WP_000709777.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	56670	57383	.	+	.	ID=gene-C9E94_RS05285;Name=C9E94_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05285;old_locus_tag=C9E94_05430
NZ_PYJR01000042.1	Protein Homology	CDS	56670	57383	.	+	0	ID=cds-WP_001013555.1;Parent=gene-C9E94_RS05285;Dbxref=GenBank:WP_001013555.1;Name=WP_001013555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460969.1;locus_tag=C9E94_RS05285;product=cobalt-factor II C(20)-methyltransferase;protein_id=WP_001013555.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	57380	58117	.	+	.	ID=gene-C9E94_RS05290;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=C9E94_RS05290;old_locus_tag=C9E94_05435
NZ_PYJR01000042.1	Protein Homology	CDS	57380	58117	.	+	0	ID=cds-WP_000764336.1;Parent=gene-C9E94_RS05290;Dbxref=GenBank:WP_000764336.1;Name=WP_000764336.1;Ontology_term=GO:0006824,GO:0009236,GO:0016020,GO:0043190;gbkey=CDS;gene=cbiM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=C9E94_RS05290;product=cobalt ECF transporter S component CbiM;protein_id=WP_000764336.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	58119	58400	.	+	.	ID=gene-C9E94_RS05295;Name=C9E94_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05295;old_locus_tag=C9E94_05440
NZ_PYJR01000042.1	Protein Homology	CDS	58119	58400	.	+	0	ID=cds-WP_000753212.1;Parent=gene-C9E94_RS05295;Dbxref=GenBank:WP_000753212.1;Name=WP_000753212.1;Ontology_term=GO:0006824,GO:0009236,GO:0015087,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460967.1;locus_tag=C9E94_RS05295;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=WP_000753212.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	58387	59064	.	+	.	ID=gene-C9E94_RS05300;Name=C9E94_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05300;old_locus_tag=C9E94_05445
NZ_PYJR01000042.1	Protein Homology	CDS	58387	59064	.	+	0	ID=cds-WP_000147126.1;Parent=gene-C9E94_RS05300;Dbxref=GenBank:WP_000147126.1;Name=WP_000147126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460966.1;locus_tag=C9E94_RS05300;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=WP_000147126.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	59073	59888	.	+	.	ID=gene-C9E94_RS05305;Name=C9E94_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05305;old_locus_tag=C9E94_05450
NZ_PYJR01000042.1	Protein Homology	CDS	59073	59888	.	+	0	ID=cds-WP_000881542.1;Parent=gene-C9E94_RS05305;Dbxref=GenBank:WP_000881542.1;Name=WP_000881542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460965.1;locus_tag=C9E94_RS05305;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_000881542.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	59885	61405	.	+	.	ID=gene-C9E94_RS05310;Name=C9E94_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05310;old_locus_tag=C9E94_05455
NZ_PYJR01000042.1	Protein Homology	CDS	59885	61405	.	+	0	ID=cds-WP_000189658.1;Parent=gene-C9E94_RS05310;Dbxref=GenBank:WP_000189658.1;Name=WP_000189658.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460964.1;locus_tag=C9E94_RS05310;product=cobyric acid synthase;protein_id=WP_000189658.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	61402	61947	.	+	.	ID=gene-C9E94_RS05315;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=C9E94_RS05315;old_locus_tag=C9E94_05460
NZ_PYJR01000042.1	Protein Homology	CDS	61402	61947	.	+	0	ID=cds-WP_000973145.1;Parent=gene-C9E94_RS05315;Dbxref=GenBank:WP_000973145.1;Name=WP_000973145.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460963.1;locus_tag=C9E94_RS05315;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_000973145.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	61944	62687	.	+	.	ID=gene-C9E94_RS05320;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=C9E94_RS05320;old_locus_tag=C9E94_05465
NZ_PYJR01000042.1	Protein Homology	CDS	61944	62687	.	+	0	ID=cds-WP_080183517.1;Parent=gene-C9E94_RS05320;Dbxref=GenBank:WP_080183517.1;Name=WP_080183517.1;Ontology_term=GO:0009236,GO:0008818,GO:0051073;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA,adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460962.1;locus_tag=C9E94_RS05320;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_080183517.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	62714	63784	.	+	.	ID=gene-C9E94_RS05325;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=C9E94_RS05325;old_locus_tag=C9E94_05470
NZ_PYJR01000042.1	Protein Homology	CDS	62714	63784	.	+	0	ID=cds-WP_001193983.1;Parent=gene-C9E94_RS05325;Dbxref=GenBank:WP_001193983.1;Name=WP_001193983.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460961.1;locus_tag=C9E94_RS05325;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_001193983.1;transl_table=11
NZ_PYJR01000042.1	RefSeq	gene	63862	64791	.	+	.	ID=gene-C9E94_RS05330;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=C9E94_RS05330;old_locus_tag=C9E94_05475
NZ_PYJR01000042.1	Protein Homology	CDS	63862	64791	.	+	0	ID=cds-WP_080183516.1;Parent=gene-C9E94_RS05330;Dbxref=GenBank:WP_080183516.1;Name=WP_080183516.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460960.1;locus_tag=C9E94_RS05330;product=L%2CD-transpeptidase;protein_id=WP_080183516.1;transl_table=11
##sequence-region NZ_PYJR01000093.1 1 60232
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000093.1	RefSeq	region	1	60232	.	+	.	ID=NZ_PYJR01000093.1:1..60232;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000093.1	RefSeq	gene	215	2260	.	+	.	ID=gene-C9E94_RS12440;Name=C9E94_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12440;old_locus_tag=C9E94_12730
NZ_PYJR01000093.1	Protein Homology	CDS	215	2260	.	+	0	ID=cds-WP_135401049.1;Parent=gene-C9E94_RS12440;Dbxref=GenBank:WP_135401049.1;Name=WP_135401049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000049444.1;locus_tag=C9E94_RS12440;product=hypothetical protein;protein_id=WP_135401049.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	2501	3217	.	-	.	ID=gene-C9E94_RS12445;Name=C9E94_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12445;old_locus_tag=C9E94_12735
NZ_PYJR01000093.1	Protein Homology	CDS	2501	3217	.	-	0	ID=cds-WP_000532939.1;Parent=gene-C9E94_RS12445;Dbxref=GenBank:WP_000532939.1;Name=WP_000532939.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416490.1;locus_tag=C9E94_RS12445;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000532939.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	3777	5408	.	-	.	ID=gene-C9E94_RS12450;Name=C9E94_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12450;old_locus_tag=C9E94_12745
NZ_PYJR01000093.1	Protein Homology	CDS	3777	5408	.	-	0	ID=cds-WP_135401050.1;Parent=gene-C9E94_RS12450;Dbxref=GenBank:WP_135401050.1;Name=WP_135401050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=C9E94_RS12450;product=class I SAM-dependent methyltransferase;protein_id=WP_135401050.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	5413	5670	.	-	.	ID=gene-C9E94_RS12455;Name=C9E94_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12455;old_locus_tag=C9E94_12750
NZ_PYJR01000093.1	Protein Homology	CDS	5413	5670	.	-	0	ID=cds-WP_001054380.1;Parent=gene-C9E94_RS12455;Dbxref=GenBank:WP_001054380.1;Name=WP_001054380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463360.1;locus_tag=C9E94_RS12455;product=YjhX family toxin;protein_id=WP_001054380.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	6158	6766	.	+	.	ID=gene-C9E94_RS12465;Name=C9E94_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12465;old_locus_tag=C9E94_12765
NZ_PYJR01000093.1	Protein Homology	CDS	6158	6766	.	+	0	ID=cds-WP_135401051.1;Parent=gene-C9E94_RS12465;Dbxref=GenBank:WP_135401051.1;Name=WP_135401051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463361.1;locus_tag=C9E94_RS12465;product=DUF1062 domain-containing protein;protein_id=WP_135401051.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	7120	8031	.	+	.	ID=gene-C9E94_RS12470;Name=C9E94_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12470;old_locus_tag=C9E94_12770
NZ_PYJR01000093.1	Protein Homology	CDS	7120	8031	.	+	0	ID=cds-WP_023240986.1;Parent=gene-C9E94_RS12470;Dbxref=GenBank:WP_023240986.1;Name=WP_023240986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463363.1;locus_tag=C9E94_RS12470;product=STM4504/CBY_0614 family protein;protein_id=WP_023240986.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	8236	8697	.	+	.	ID=gene-C9E94_RS12475;Name=C9E94_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12475;old_locus_tag=C9E94_12775
NZ_PYJR01000093.1	Protein Homology	CDS	8236	8697	.	+	0	ID=cds-WP_001682584.1;Parent=gene-C9E94_RS12475;Dbxref=GenBank:WP_001682584.1;Name=WP_001682584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463364.1;locus_tag=C9E94_RS12475;product=DUF302 domain-containing protein;protein_id=WP_001682584.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	8714	9379	.	-	.	ID=gene-C9E94_RS12480;Name=C9E94_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12480;old_locus_tag=C9E94_12780
NZ_PYJR01000093.1	Protein Homology	CDS	8714	9379	.	-	0	ID=cds-WP_000588693.1;Parent=gene-C9E94_RS12480;Dbxref=GenBank:WP_000588693.1;Name=WP_000588693.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588696.1;locus_tag=C9E94_RS12480;product=dienelactone hydrolase family protein;protein_id=WP_000588693.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	9729	10502	.	+	.	ID=gene-C9E94_RS12485;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=C9E94_RS12485;old_locus_tag=C9E94_12790
NZ_PYJR01000093.1	Protein Homology	CDS	9729	10502	.	+	0	ID=cds-WP_000841654.1;Parent=gene-C9E94_RS12485;Dbxref=GenBank:WP_000841654.1;Name=WP_000841654.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463366.1;locus_tag=C9E94_RS12485;product=Uxu operon transcriptional regulator;protein_id=WP_000841654.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	10503	11516	.	-	.	ID=gene-C9E94_RS12490;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=C9E94_RS12490;old_locus_tag=C9E94_12795
NZ_PYJR01000093.1	Protein Homology	CDS	10503	11516	.	-	0	ID=cds-WP_001094609.1;Parent=gene-C9E94_RS12490;Dbxref=GenBank:WP_001094609.1;Name=WP_001094609.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463367.1;locus_tag=C9E94_RS12490;product=tryptophan--tRNA ligase;protein_id=WP_001094609.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	12234	12764	.	+	.	ID=gene-C9E94_RS12495;Name=C9E94_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12495;old_locus_tag=C9E94_12800
NZ_PYJR01000093.1	Protein Homology	CDS	12234	12764	.	+	0	ID=cds-WP_000907671.1;Parent=gene-C9E94_RS12495;Dbxref=GenBank:WP_000907671.1;Name=WP_000907671.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463368.3;locus_tag=C9E94_RS12495;product=Hcp family type VI secretion system effector;protein_id=WP_000907671.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	13003	13737	.	+	.	ID=gene-C9E94_RS12500;Name=C9E94_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12500;old_locus_tag=C9E94_12805
NZ_PYJR01000093.1	Protein Homology	CDS	13003	13737	.	+	0	ID=cds-WP_000683254.1;Parent=gene-C9E94_RS12500;Dbxref=GenBank:WP_000683254.1;Name=WP_000683254.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463369.1;locus_tag=C9E94_RS12500;product=aspartate/glutamate racemase family protein;protein_id=WP_000683254.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	13743	14651	.	-	.	ID=gene-C9E94_RS12505;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=C9E94_RS12505;old_locus_tag=C9E94_12810
NZ_PYJR01000093.1	Protein Homology	CDS	13743	14651	.	-	0	ID=cds-WP_000383509.1;Parent=gene-C9E94_RS12505;Dbxref=GenBank:WP_000383509.1;Name=WP_000383509.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463370.1;locus_tag=C9E94_RS12505;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_000383509.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	14770	15942	.	-	.	ID=gene-C9E94_RS12510;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=C9E94_RS12510;old_locus_tag=C9E94_12815
NZ_PYJR01000093.1	Protein Homology	CDS	14770	15942	.	-	0	ID=cds-WP_020839643.1;Parent=gene-C9E94_RS12510;Dbxref=GenBank:WP_020839643.1;Name=WP_020839643.1;Ontology_term=GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463371.1;locus_tag=C9E94_RS12510;product=beta-aspartyl-peptidase;protein_id=WP_020839643.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	15955	16416	.	-	.	ID=gene-C9E94_RS12515;Name=C9E94_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12515;old_locus_tag=C9E94_12820
NZ_PYJR01000093.1	Protein Homology	CDS	15955	16416	.	-	0	ID=cds-WP_000211979.1;Parent=gene-C9E94_RS12515;Dbxref=GenBank:WP_000211979.1;Name=WP_000211979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463372.1;locus_tag=C9E94_RS12515;product=YjiG family protein;protein_id=WP_000211979.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	16413	17084	.	-	.	ID=gene-C9E94_RS12520;Name=C9E94_RS12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12520;old_locus_tag=C9E94_12825
NZ_PYJR01000093.1	Protein Homology	CDS	16413	17084	.	-	0	ID=cds-WP_000068750.1;Parent=gene-C9E94_RS12520;Dbxref=GenBank:WP_000068750.1;Name=WP_000068750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418750.2;locus_tag=C9E94_RS12520;product=nucleoside recognition domain-containing protein;protein_id=WP_000068750.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	17957	19141	.	-	.	ID=gene-C9E94_RS12525;Name=C9E94_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12525;old_locus_tag=C9E94_12835
NZ_PYJR01000093.1	Protein Homology	CDS	17957	19141	.	-	0	ID=cds-WP_058821003.1;Parent=gene-C9E94_RS12525;Dbxref=GenBank:WP_058821003.1;Name=WP_058821003.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463374.1;locus_tag=C9E94_RS12525;product=MFS transporter;protein_id=WP_058821003.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	19361	20632	.	-	.	ID=gene-C9E94_RS12530;Name=C9E94_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12530;old_locus_tag=C9E94_12840
NZ_PYJR01000093.1	Protein Homology	CDS	19361	20632	.	-	0	ID=cds-WP_001033033.1;Parent=gene-C9E94_RS12530;Dbxref=GenBank:WP_001033033.1;Name=WP_001033033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463375.1;locus_tag=C9E94_RS12530;product=DUF445 domain-containing protein;protein_id=WP_001033033.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	20741	21982	.	-	.	ID=gene-C9E94_RS12535;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=C9E94_RS12535;old_locus_tag=C9E94_12845
NZ_PYJR01000093.1	Protein Homology	CDS	20741	21982	.	-	0	ID=cds-WP_001188918.1;Parent=gene-C9E94_RS12535;Dbxref=GenBank:WP_001188918.1;Name=WP_001188918.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463376.1;locus_tag=C9E94_RS12535;product=multidrug efflux MFS transporter MdtM;protein_id=WP_001188918.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	pseudogene	22461	23413	.	+	.	ID=gene-C9E94_RS12540;Name=C9E94_RS12540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS12540;old_locus_tag=C9E94_12850;pseudo=true
NZ_PYJR01000093.1	Protein Homology	CDS	22461	23413	.	+	0	ID=cds-C9E94_RS12540;Parent=gene-C9E94_RS12540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=C9E94_RS12540;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	23594	24964	.	+	.	ID=gene-C9E94_RS12545;Name=C9E94_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12545;old_locus_tag=C9E94_12855
NZ_PYJR01000093.1	Protein Homology	CDS	23594	24964	.	+	0	ID=cds-WP_080222720.1;Parent=gene-C9E94_RS12545;Dbxref=GenBank:WP_080222720.1;Name=WP_080222720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463378.1;locus_tag=C9E94_RS12545;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_080222720.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	25059	25202	.	-	.	ID=gene-C9E94_RS12550;Name=C9E94_RS12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12550;old_locus_tag=C9E94_12860
NZ_PYJR01000093.1	Protein Homology	CDS	25059	25202	.	-	0	ID=cds-WP_001622104.1;Parent=gene-C9E94_RS12550;Dbxref=GenBank:WP_001622104.1;Name=WP_001622104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463379.1;locus_tag=C9E94_RS12550;product=hypothetical protein;protein_id=WP_001622104.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	25169	25333	.	+	.	ID=gene-C9E94_RS12555;Name=yjiS;gbkey=Gene;gene=yjiS;gene_biotype=protein_coding;locus_tag=C9E94_RS12555;old_locus_tag=C9E94_12865
NZ_PYJR01000093.1	Protein Homology	CDS	25169	25333	.	+	0	ID=cds-WP_000397917.1;Parent=gene-C9E94_RS12555;Dbxref=GenBank:WP_000397917.1;Name=WP_000397917.1;gbkey=CDS;gene=yjiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463380.1;locus_tag=C9E94_RS12555;product=DUF1127 domain-containing protein YjiS;protein_id=WP_000397917.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	25410	26330	.	-	.	ID=gene-C9E94_RS12560;Name=C9E94_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12560;old_locus_tag=C9E94_12870
NZ_PYJR01000093.1	Protein Homology	CDS	25410	26330	.	-	0	ID=cds-WP_023234382.1;Parent=gene-C9E94_RS12560;Dbxref=GenBank:WP_023234382.1;Name=WP_023234382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280241.1;locus_tag=C9E94_RS12560;product=DUF5655 domain-containing protein;protein_id=WP_023234382.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	26466	28319	.	+	.	ID=gene-C9E94_RS12565;Name=C9E94_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12565;old_locus_tag=C9E94_12875
NZ_PYJR01000093.1	Protein Homology	CDS	26466	28319	.	+	0	ID=cds-WP_135401052.1;Parent=gene-C9E94_RS12565;Dbxref=GenBank:WP_135401052.1;Name=WP_135401052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102841.1;locus_tag=C9E94_RS12565;product=GmrSD restriction endonuclease domain-containing protein;protein_id=WP_135401052.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	28364	28684	.	-	.	ID=gene-C9E94_RS12570;Name=symE;gbkey=Gene;gene=symE;gene_biotype=protein_coding;locus_tag=C9E94_RS12570;old_locus_tag=C9E94_12880
NZ_PYJR01000093.1	Protein Homology	CDS	28364	28684	.	-	0	ID=cds-WP_001736427.1;Parent=gene-C9E94_RS12570;Dbxref=GenBank:WP_001736427.1;Name=WP_001736427.1;gbkey=CDS;gene=symE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551937.1;locus_tag=C9E94_RS12570;product=endoribonuclease SymE;protein_id=WP_001736427.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	28900	30657	.	-	.	ID=gene-C9E94_RS12575;Name=C9E94_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12575;old_locus_tag=C9E94_12885
NZ_PYJR01000093.1	Protein Homology	CDS	28900	30657	.	-	0	ID=cds-WP_135401053.1;Parent=gene-C9E94_RS12575;Dbxref=GenBank:WP_135401053.1;Name=WP_135401053.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110087.1;locus_tag=C9E94_RS12575;product=restriction endonuclease subunit S;protein_id=WP_135401053.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	30657	32126	.	-	.	ID=gene-C9E94_RS12580;Name=C9E94_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12580;old_locus_tag=C9E94_12890
NZ_PYJR01000093.1	Protein Homology	CDS	30657	32126	.	-	0	ID=cds-WP_135401054.1;Parent=gene-C9E94_RS12580;Dbxref=GenBank:WP_135401054.1;Name=WP_135401054.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313334.2;locus_tag=C9E94_RS12580;product=type I restriction-modification system subunit M;protein_id=WP_135401054.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	32201	34624	.	-	.	ID=gene-C9E94_RS12585;Name=hsdR;gbkey=Gene;gene=hsdR;gene_biotype=protein_coding;locus_tag=C9E94_RS12585;old_locus_tag=C9E94_12895
NZ_PYJR01000093.1	Protein Homology	CDS	32201	34624	.	-	0	ID=cds-WP_135401055.1;Parent=gene-C9E94_RS12585;Dbxref=GenBank:WP_135401055.1;Name=WP_135401055.1;Ontology_term=GO:0009307,GO:0003678,GO:0015666;gbkey=CDS;gene=hsdR;go_function=DNA helicase activity|0003678||IEA,restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313335.1;locus_tag=C9E94_RS12585;product=EcoAI/FtnUII family type I restriction enzme subunit R;protein_id=WP_135401055.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	34766	35734	.	+	.	ID=gene-C9E94_RS12590;Name=C9E94_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12590;old_locus_tag=C9E94_12900
NZ_PYJR01000093.1	Protein Homology	CDS	34766	35734	.	+	0	ID=cds-WP_023207049.1;Parent=gene-C9E94_RS12590;Dbxref=GenBank:WP_023207049.1;Name=WP_023207049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441751.1;locus_tag=C9E94_RS12590;product=hypothetical protein;protein_id=WP_023207049.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	35850	36806	.	-	.	ID=gene-C9E94_RS12595;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=C9E94_RS12595;old_locus_tag=C9E94_12905
NZ_PYJR01000093.1	Protein Homology	CDS	35850	36806	.	-	0	ID=cds-WP_000612224.1;Parent=gene-C9E94_RS12595;Dbxref=GenBank:WP_000612224.1;Name=WP_000612224.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463389.1;locus_tag=C9E94_RS12595;product=GTPase;protein_id=WP_000612224.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	36817	37020	.	-	.	ID=gene-C9E94_RS12600;Name=C9E94_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12600;old_locus_tag=C9E94_12910
NZ_PYJR01000093.1	Protein Homology	CDS	36817	37020	.	-	0	ID=cds-WP_000460616.1;Parent=gene-C9E94_RS12600;Dbxref=GenBank:WP_000460616.1;Name=WP_000460616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463390.1;locus_tag=C9E94_RS12600;product=YbdD/YjiX family protein;protein_id=WP_000460616.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	37115	39265	.	-	.	ID=gene-C9E94_RS12605;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=C9E94_RS12605;old_locus_tag=C9E94_12915
NZ_PYJR01000093.1	Protein Homology	CDS	37115	39265	.	-	0	ID=cds-WP_000379929.1;Parent=gene-C9E94_RS12605;Dbxref=GenBank:WP_000379929.1;Name=WP_000379929.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463391.1;locus_tag=C9E94_RS12605;product=pyruvate/proton symporter BtsT;protein_id=WP_000379929.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	39632	41293	.	+	.	ID=gene-C9E94_RS12610;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=C9E94_RS12610;old_locus_tag=C9E94_12920
NZ_PYJR01000093.1	Protein Homology	CDS	39632	41293	.	+	0	ID=cds-WP_000919519.1;Parent=gene-C9E94_RS12610;Dbxref=GenBank:WP_000919519.1;Name=WP_000919519.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=C9E94_RS12610;product=methyl-accepting chemotaxis protein;protein_id=WP_000919519.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	pseudogene	41406	41483	.	-	.	ID=gene-C9E94_RS23640;Name=C9E94_RS23640;end_range=41483,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23640;partial=true;pseudo=true
NZ_PYJR01000093.1	Protein Homology	CDS	41406	41483	.	-	0	ID=cds-C9E94_RS23640;Parent=gene-C9E94_RS23640;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=41483,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012134222.1;locus_tag=C9E94_RS23640;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	41617	44382	.	+	.	ID=gene-C9E94_RS12620;Name=C9E94_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12620;old_locus_tag=C9E94_12925
NZ_PYJR01000093.1	Protein Homology	CDS	41617	44382	.	+	0	ID=cds-WP_135401056.1;Parent=gene-C9E94_RS12620;Dbxref=GenBank:WP_135401056.1;Name=WP_135401056.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=C9E94_RS12620;product=sigma 54-interacting transcriptional regulator;protein_id=WP_135401056.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	44484	44906	.	+	.	ID=gene-C9E94_RS12625;Name=C9E94_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12625;old_locus_tag=C9E94_12930
NZ_PYJR01000093.1	Protein Homology	CDS	44484	44906	.	+	0	ID=cds-WP_000820693.1;Parent=gene-C9E94_RS12625;Dbxref=GenBank:WP_000820693.1;Name=WP_000820693.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463394.1;locus_tag=C9E94_RS12625;product=PTS sugar transporter subunit IIA;protein_id=WP_000820693.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	44921	45382	.	+	.	ID=gene-C9E94_RS12630;Name=C9E94_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12630;old_locus_tag=C9E94_12935
NZ_PYJR01000093.1	Protein Homology	CDS	44921	45382	.	+	0	ID=cds-WP_000634727.1;Parent=gene-C9E94_RS12630;Dbxref=GenBank:WP_000634727.1;Name=WP_000634727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463395.1;locus_tag=C9E94_RS12630;product=PTS sugar transporter subunit IIB;protein_id=WP_000634727.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	45408	46187	.	+	.	ID=gene-C9E94_RS12635;Name=C9E94_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12635;old_locus_tag=C9E94_12940
NZ_PYJR01000093.1	Protein Homology	CDS	45408	46187	.	+	0	ID=cds-WP_000568569.1;Parent=gene-C9E94_RS12635;Dbxref=GenBank:WP_000568569.1;Name=WP_000568569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463396.1;locus_tag=C9E94_RS12635;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000568569.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	46165	47013	.	+	.	ID=gene-C9E94_RS12640;Name=C9E94_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12640;old_locus_tag=C9E94_12945
NZ_PYJR01000093.1	Protein Homology	CDS	46165	47013	.	+	0	ID=cds-WP_000178065.1;Parent=gene-C9E94_RS12640;Dbxref=GenBank:WP_000178065.1;Name=WP_000178065.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224959.1;locus_tag=C9E94_RS12640;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000178065.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	47026	48087	.	+	.	ID=gene-C9E94_RS12645;Name=C9E94_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12645;old_locus_tag=C9E94_12950
NZ_PYJR01000093.1	Protein Homology	CDS	47026	48087	.	+	0	ID=cds-WP_001622136.1;Parent=gene-C9E94_RS12645;Dbxref=GenBank:WP_001622136.1;Name=WP_001622136.1;Ontology_term=GO:0005975,GO:0016787,GO:0097367;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463398.1;locus_tag=C9E94_RS12645;product=SIS domain-containing protein;protein_id=WP_001622136.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	48105	49115	.	+	.	ID=gene-C9E94_RS12650;Name=C9E94_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12650;old_locus_tag=C9E94_12955
NZ_PYJR01000093.1	Protein Homology	CDS	48105	49115	.	+	0	ID=cds-WP_023138456.1;Parent=gene-C9E94_RS12650;Dbxref=GenBank:WP_023138456.1;Name=WP_023138456.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224961.1;locus_tag=C9E94_RS12650;product=SIS domain-containing protein;protein_id=WP_023138456.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	49249	51540	.	-	.	ID=gene-C9E94_RS12655;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=C9E94_RS12655;old_locus_tag=C9E94_12960
NZ_PYJR01000093.1	Protein Homology	CDS	49249	51540	.	-	0	ID=cds-WP_017441756.1;Parent=gene-C9E94_RS12655;Dbxref=GenBank:WP_017441756.1;Name=WP_017441756.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465680.1;locus_tag=C9E94_RS12655;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_017441756.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	51823	52284	.	-	.	ID=gene-C9E94_RS12660;Name=C9E94_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12660;old_locus_tag=C9E94_12965
NZ_PYJR01000093.1	Protein Homology	CDS	51823	52284	.	-	0	ID=cds-WP_001090314.1;Parent=gene-C9E94_RS12660;Dbxref=GenBank:WP_001090314.1;Name=WP_001090314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463401.1;locus_tag=C9E94_RS12660;product=DUF2501 domain-containing protein;protein_id=WP_001090314.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	52342	53079	.	-	.	ID=gene-C9E94_RS12665;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=C9E94_RS12665;old_locus_tag=C9E94_12970
NZ_PYJR01000093.1	Protein Homology	CDS	52342	53079	.	-	0	ID=cds-WP_000799924.1;Parent=gene-C9E94_RS12665;Dbxref=GenBank:WP_000799924.1;Name=WP_000799924.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463402.1;locus_tag=C9E94_RS12665;product=DNA replication protein DnaC;protein_id=WP_000799924.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	53082	53621	.	-	.	ID=gene-C9E94_RS12670;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=C9E94_RS12670;old_locus_tag=C9E94_12975
NZ_PYJR01000093.1	Protein Homology	CDS	53082	53621	.	-	0	ID=cds-WP_000098581.1;Parent=gene-C9E94_RS12670;Dbxref=GenBank:WP_000098581.1;Name=WP_000098581.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463403.1;locus_tag=C9E94_RS12670;product=primosomal protein DnaT;protein_id=WP_000098581.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	53714	54187	.	-	.	ID=gene-C9E94_RS12675;Name=C9E94_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12675;old_locus_tag=C9E94_12980
NZ_PYJR01000093.1	Protein Homology	CDS	53714	54187	.	-	0	ID=cds-WP_000511329.1;Parent=gene-C9E94_RS12675;Dbxref=GenBank:WP_000511329.1;Name=WP_000511329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463404.1;locus_tag=C9E94_RS12675;product=threonine/serine exporter;protein_id=WP_000511329.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	54178	54954	.	-	.	ID=gene-C9E94_RS12680;Name=C9E94_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12680;old_locus_tag=C9E94_12985
NZ_PYJR01000093.1	Protein Homology	CDS	54178	54954	.	-	0	ID=cds-WP_001747536.1;Parent=gene-C9E94_RS12680;Dbxref=GenBank:WP_001747536.1;Name=WP_001747536.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=C9E94_RS12680;product=threonine/serine ThrE exporter family protein;protein_id=WP_001747536.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	55667	56392	.	+	.	ID=gene-C9E94_RS12685;Name=C9E94_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12685;old_locus_tag=C9E94_12990
NZ_PYJR01000093.1	Protein Homology	CDS	55667	56392	.	+	0	ID=cds-WP_000936652.1;Parent=gene-C9E94_RS12685;Dbxref=GenBank:WP_000936652.1;Name=WP_000936652.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463406.1;locus_tag=C9E94_RS12685;product=response regulator transcription factor;protein_id=WP_000936652.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	56353	57027	.	+	.	ID=gene-C9E94_RS12690;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=C9E94_RS12690;old_locus_tag=C9E94_12995
NZ_PYJR01000093.1	Protein Homology	CDS	56353	57027	.	+	0	ID=cds-WP_000431546.1;Parent=gene-C9E94_RS12690;Dbxref=GenBank:WP_000431546.1;Name=WP_000431546.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463407.3;locus_tag=C9E94_RS12690;product=DNA-binding transcriptional activator BglJ;protein_id=WP_000431546.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	57078	57536	.	-	.	ID=gene-C9E94_RS12695;Name=C9E94_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12695;old_locus_tag=C9E94_13000
NZ_PYJR01000093.1	Protein Homology	CDS	57078	57536	.	-	0	ID=cds-WP_000058276.1;Parent=gene-C9E94_RS12695;Dbxref=GenBank:WP_000058276.1;Name=WP_000058276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463408.1;locus_tag=C9E94_RS12695;product=YbaK/EbsC family protein;protein_id=WP_000058276.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	57687	58475	.	-	.	ID=gene-C9E94_RS12700;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=C9E94_RS12700;old_locus_tag=C9E94_13005
NZ_PYJR01000093.1	Protein Homology	CDS	57687	58475	.	-	0	ID=cds-WP_135401057.1;Parent=gene-C9E94_RS12700;Dbxref=GenBank:WP_135401057.1;Name=WP_135401057.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463409.1;locus_tag=C9E94_RS12700;product=siderophore-iron reductase FhuF;protein_id=WP_135401057.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	58596	59660	.	-	.	ID=gene-C9E94_RS12705;Name=C9E94_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12705;old_locus_tag=C9E94_13010
NZ_PYJR01000093.1	Protein Homology	CDS	58596	59660	.	-	0	ID=cds-WP_023240186.1;Parent=gene-C9E94_RS12705;Dbxref=GenBank:WP_023240186.1;Name=WP_023240186.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463410.1;locus_tag=C9E94_RS12705;product=GGDEF domain-containing protein;protein_id=WP_023240186.1;transl_table=11
NZ_PYJR01000093.1	RefSeq	gene	59911	60147	.	+	.	ID=gene-C9E94_RS12710;Name=C9E94_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12710;old_locus_tag=C9E94_13015
NZ_PYJR01000093.1	Protein Homology	CDS	59911	60147	.	+	0	ID=cds-WP_000941879.1;Parent=gene-C9E94_RS12710;Dbxref=GenBank:WP_000941879.1;Name=WP_000941879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463411.1;locus_tag=C9E94_RS12710;product=DUF1435 domain-containing protein;protein_id=WP_000941879.1;transl_table=11
##sequence-region NZ_PYJR01000012.1 1 59401
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000012.1	RefSeq	region	1	59401	.	+	.	ID=NZ_PYJR01000012.1:1..59401;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000012.1	RefSeq	gene	1	675	.	+	.	ID=gene-C9E94_RS00945;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=C9E94_RS00945;old_locus_tag=C9E94_00960;partial=true;start_range=.,1
NZ_PYJR01000012.1	Protein Homology	CDS	1	675	.	+	0	ID=cds-WP_135400740.1;Parent=gene-C9E94_RS00945;Dbxref=GenBank:WP_135400740.1;Name=WP_135400740.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460756.1;locus_tag=C9E94_RS00945;partial=true;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_135400740.1;start_range=.,1;transl_table=11
NZ_PYJR01000012.1	RefSeq	pseudogene	772	2487	.	+	.	ID=gene-C9E94_RS00950;Name=C9E94_RS00950;end_range=2487,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS00950;old_locus_tag=C9E94_00965;partial=true;pseudo=true
NZ_PYJR01000012.1	Protein Homology	CDS	772	2487	.	+	0	ID=cds-C9E94_RS00950;Parent=gene-C9E94_RS00950;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;end_range=2487,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF003714.0;locus_tag=C9E94_RS00950;partial=true;product=potassium/proton antiporter;pseudo=true;transl_table=11
NZ_PYJR01000012.1	RefSeq	pseudogene	2443	2535	.	-	.	ID=gene-C9E94_RS23835;Name=C9E94_RS23835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23835;partial=true;pseudo=true;start_range=.,2443
NZ_PYJR01000012.1	Protein Homology	CDS	2443	2535	.	-	0	ID=cds-C9E94_RS23835;Parent=gene-C9E94_RS23835;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049075.1;locus_tag=C9E94_RS23835;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2443;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	2568	3638	.	-	.	ID=gene-C9E94_RS00955;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=C9E94_RS00955;old_locus_tag=C9E94_00970
NZ_PYJR01000012.1	Protein Homology	CDS	2568	3638	.	-	0	ID=cds-WP_000197909.1;Parent=gene-C9E94_RS00955;Dbxref=GenBank:WP_000197909.1;Name=WP_000197909.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460758.1;locus_tag=C9E94_RS00955;product=catabolic alanine racemase DadX;protein_id=WP_000197909.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	3652	4950	.	-	.	ID=gene-C9E94_RS00960;Name=C9E94_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00960;old_locus_tag=C9E94_00975
NZ_PYJR01000012.1	Protein Homology	CDS	3652	4950	.	-	0	ID=cds-WP_001266937.1;Parent=gene-C9E94_RS00960;Dbxref=GenBank:WP_001266937.1;Name=WP_001266937.1;Ontology_term=GO:0055130,GO:0008718,GO:0016491,GO:0071949;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;go_process=D-alanine catabolic process|0055130||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460759.1;locus_tag=C9E94_RS00960;product=D-amino acid dehydrogenase;protein_id=WP_001266937.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	5273	6805	.	+	.	ID=gene-C9E94_RS00965;Name=C9E94_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00965;old_locus_tag=C9E94_00980
NZ_PYJR01000012.1	Protein Homology	CDS	5273	6805	.	+	0	ID=cds-WP_001240769.1;Parent=gene-C9E94_RS00965;Dbxref=GenBank:WP_001240769.1;Name=WP_001240769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460760.3;locus_tag=C9E94_RS00965;product=SpoVR family protein;protein_id=WP_001240769.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	6852	7571	.	-	.	ID=gene-C9E94_RS00970;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=C9E94_RS00970;old_locus_tag=C9E94_00985
NZ_PYJR01000012.1	Protein Homology	CDS	6852	7571	.	-	0	ID=cds-WP_000234826.1;Parent=gene-C9E94_RS00970;Dbxref=GenBank:WP_000234826.1;Name=WP_000234826.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460761.1;locus_tag=C9E94_RS00970;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_000234826.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	7791	9335	.	+	.	ID=gene-C9E94_RS00975;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=C9E94_RS00975;old_locus_tag=C9E94_00990
NZ_PYJR01000012.1	Protein Homology	CDS	7791	9335	.	+	0	ID=cds-WP_000406446.1;Parent=gene-C9E94_RS00975;Dbxref=GenBank:WP_000406446.1;Name=WP_000406446.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460762.1;locus_tag=C9E94_RS00975;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_000406446.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	9477	10007	.	+	.	ID=gene-C9E94_RS00980;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=C9E94_RS00980;old_locus_tag=C9E94_00995
NZ_PYJR01000012.1	Protein Homology	CDS	9477	10007	.	+	0	ID=cds-WP_000943475.1;Parent=gene-C9E94_RS00980;Dbxref=GenBank:WP_000943475.1;Name=WP_000943475.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460763.1;locus_tag=C9E94_RS00980;product=disulfide bond formation protein DsbB;protein_id=WP_000943475.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	10116	10457	.	+	.	ID=gene-C9E94_RS00985;Name=C9E94_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00985;old_locus_tag=C9E94_01000
NZ_PYJR01000012.1	Protein Homology	CDS	10116	10457	.	+	0	ID=cds-WP_000018967.1;Parent=gene-C9E94_RS00985;Dbxref=GenBank:WP_000018967.1;Name=WP_000018967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460764.1;locus_tag=C9E94_RS00985;product=DUF1971 domain-containing protein;protein_id=WP_000018967.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	10529	10702	.	-	.	ID=gene-C9E94_RS00990;Name=C9E94_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00990;old_locus_tag=C9E94_01005
NZ_PYJR01000012.1	Protein Homology	CDS	10529	10702	.	-	0	ID=cds-WP_001083582.1;Parent=gene-C9E94_RS00990;Dbxref=GenBank:WP_001083582.1;Name=WP_001083582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460765.1;locus_tag=C9E94_RS00990;product=GnsA/GnsB family addiction module toxin;protein_id=WP_001083582.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	10894	11031	.	-	.	ID=gene-C9E94_RS00995;Name=C9E94_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00995;old_locus_tag=C9E94_01010
NZ_PYJR01000012.1	Protein Homology	CDS	10894	11031	.	-	0	ID=cds-WP_001519337.1;Parent=gene-C9E94_RS00995;Dbxref=GenBank:WP_001519337.1;Name=WP_001519337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460766.1;locus_tag=C9E94_RS00995;product=hypothetical protein;protein_id=WP_001519337.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	11383	11829	.	-	.	ID=gene-C9E94_RS01000;Name=C9E94_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01000;old_locus_tag=C9E94_01015
NZ_PYJR01000012.1	Protein Homology	CDS	11383	11829	.	-	0	ID=cds-WP_001285703.1;Parent=gene-C9E94_RS01000;Dbxref=GenBank:WP_001285703.1;Name=WP_001285703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=C9E94_RS01000;product=YcgN family cysteine cluster protein;protein_id=WP_001285703.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	11922	12581	.	-	.	ID=gene-C9E94_RS01005;Name=C9E94_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01005;old_locus_tag=C9E94_01020
NZ_PYJR01000012.1	Protein Homology	CDS	11922	12581	.	-	0	ID=cds-WP_001537367.1;Parent=gene-C9E94_RS01005;Dbxref=GenBank:WP_001537367.1;Name=WP_001537367.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460768.1;locus_tag=C9E94_RS01005;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_001537367.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	12631	12924	.	-	.	ID=gene-C9E94_RS01010;Name=C9E94_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01010;old_locus_tag=C9E94_01025
NZ_PYJR01000012.1	Protein Homology	CDS	12631	12924	.	-	0	ID=cds-WP_001525604.1;Parent=gene-C9E94_RS01010;Dbxref=GenBank:WP_001525604.1;Name=WP_001525604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=C9E94_RS01010;product=YcgL domain-containing protein;protein_id=WP_001525604.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	13050	13757	.	+	.	ID=gene-C9E94_RS01015;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=C9E94_RS01015;old_locus_tag=C9E94_01030
NZ_PYJR01000012.1	Protein Homology	CDS	13050	13757	.	+	0	ID=cds-WP_000072527.1;Parent=gene-C9E94_RS01015;Dbxref=GenBank:WP_000072527.1;Name=WP_000072527.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460770.1;locus_tag=C9E94_RS01015;product=septum site-determining protein MinC;protein_id=WP_000072527.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	13781	14593	.	+	.	ID=gene-C9E94_RS01020;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=C9E94_RS01020;old_locus_tag=C9E94_01035
NZ_PYJR01000012.1	Protein Homology	CDS	13781	14593	.	+	0	ID=cds-WP_000101047.1;Parent=gene-C9E94_RS01020;Dbxref=GenBank:WP_000101047.1;Name=WP_000101047.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=C9E94_RS01020;product=septum site-determining protein MinD;protein_id=WP_000101047.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	14597	14863	.	+	.	ID=gene-C9E94_RS01025;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=C9E94_RS01025;old_locus_tag=C9E94_01040
NZ_PYJR01000012.1	Protein Homology	CDS	14597	14863	.	+	0	ID=cds-WP_001185666.1;Parent=gene-C9E94_RS01025;Dbxref=GenBank:WP_001185666.1;Name=WP_001185666.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460772.1;locus_tag=C9E94_RS01025;product=cell division topological specificity factor MinE;protein_id=WP_001185666.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	14985	16112	.	-	.	ID=gene-C9E94_RS01030;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=C9E94_RS01030;old_locus_tag=C9E94_01045
NZ_PYJR01000012.1	Protein Homology	CDS	14985	16112	.	-	0	ID=cds-WP_001109128.1;Parent=gene-C9E94_RS01030;Dbxref=GenBank:WP_001109128.1;Name=WP_001109128.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416318.1;locus_tag=C9E94_RS01030;product=ribonuclease D;protein_id=WP_001109128.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	16185	17870	.	-	.	ID=gene-C9E94_RS01035;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=C9E94_RS01035;old_locus_tag=C9E94_01050
NZ_PYJR01000012.1	Protein Homology	CDS	16185	17870	.	-	0	ID=cds-WP_000758418.1;Parent=gene-C9E94_RS01035;Dbxref=GenBank:WP_000758418.1;Name=WP_000758418.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460774.1;locus_tag=C9E94_RS01035;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_000758418.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	18075	18656	.	-	.	ID=gene-C9E94_RS01040;Name=C9E94_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01040;old_locus_tag=C9E94_01060
NZ_PYJR01000012.1	Protein Homology	CDS	18075	18656	.	-	0	ID=cds-WP_021294445.1;Parent=gene-C9E94_RS01040;Dbxref=GenBank:WP_021294445.1;Name=WP_021294445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460775.1;locus_tag=C9E94_RS01040;product=Slp family lipoprotein;protein_id=WP_021294445.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	18728	19423	.	-	.	ID=gene-C9E94_RS01045;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=C9E94_RS01045;old_locus_tag=C9E94_01065
NZ_PYJR01000012.1	Protein Homology	CDS	18728	19423	.	-	0	ID=cds-WP_001221017.1;Parent=gene-C9E94_RS01045;Dbxref=GenBank:WP_001221017.1;Name=WP_001221017.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460776.1;locus_tag=C9E94_RS01045;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_001221017.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	19481	21391	.	-	.	ID=gene-C9E94_RS01050;Name=C9E94_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01050;old_locus_tag=C9E94_01070
NZ_PYJR01000012.1	Protein Homology	CDS	19481	21391	.	-	0	ID=cds-WP_000128811.1;Parent=gene-C9E94_RS01050;Dbxref=GenBank:WP_000128811.1;Name=WP_000128811.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460777.1;locus_tag=C9E94_RS01050;product=ATP-dependent DNA helicase;protein_id=WP_000128811.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	21523	21867	.	+	.	ID=gene-C9E94_RS01055;Name=C9E94_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01055;old_locus_tag=C9E94_01075
NZ_PYJR01000012.1	Protein Homology	CDS	21523	21867	.	+	0	ID=cds-WP_000029550.1;Parent=gene-C9E94_RS01055;Dbxref=GenBank:WP_000029550.1;Name=WP_000029550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460778.1;locus_tag=C9E94_RS01055;product=RidA family protein;protein_id=WP_000029550.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	21873	22052	.	-	.	ID=gene-C9E94_RS01060;Name=C9E94_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01060;old_locus_tag=C9E94_01080
NZ_PYJR01000012.1	Protein Homology	CDS	21873	22052	.	-	0	ID=cds-WP_000457328.1;Parent=gene-C9E94_RS01060;Dbxref=GenBank:WP_000457328.1;Name=WP_000457328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460779.1;locus_tag=C9E94_RS01060;product=YoaH family protein;protein_id=WP_000457328.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	22133	23497	.	+	.	ID=gene-C9E94_RS01065;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=C9E94_RS01065;old_locus_tag=C9E94_01085
NZ_PYJR01000012.1	Protein Homology	CDS	22133	23497	.	+	0	ID=cds-WP_072202706.1;Parent=gene-C9E94_RS01065;Dbxref=GenBank:WP_072202706.1;Name=WP_072202706.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460780.1;locus_tag=C9E94_RS01065;product=aminodeoxychorismate synthase component 1;protein_id=WP_072202706.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	23501	24079	.	+	.	ID=gene-C9E94_RS01070;Name=C9E94_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01070;old_locus_tag=C9E94_01090
NZ_PYJR01000012.1	Protein Homology	CDS	23501	24079	.	+	0	ID=cds-WP_000381544.1;Parent=gene-C9E94_RS01070;Dbxref=GenBank:WP_000381544.1;Name=WP_000381544.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460781.1;locus_tag=C9E94_RS01070;product=CoA pyrophosphatase;protein_id=WP_000381544.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	24343	25707	.	+	.	ID=gene-C9E94_RS01075;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=C9E94_RS01075;old_locus_tag=C9E94_01095
NZ_PYJR01000012.1	Protein Homology	CDS	24343	25707	.	+	0	ID=cds-WP_000624274.1;Parent=gene-C9E94_RS01075;Dbxref=GenBank:WP_000624274.1;Name=WP_000624274.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460782.1;locus_tag=C9E94_RS01075;product=L-serine ammonia-lyase;protein_id=WP_000624274.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	25845	27446	.	+	.	ID=gene-C9E94_RS01080;Name=C9E94_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01080;old_locus_tag=C9E94_01100
NZ_PYJR01000012.1	Protein Homology	CDS	25845	27446	.	+	0	ID=cds-WP_135400741.1;Parent=gene-C9E94_RS01080;Dbxref=GenBank:WP_135400741.1;Name=WP_135400741.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192512.1;locus_tag=C9E94_RS01080;product=EAL domain-containing protein;protein_id=WP_135400741.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	27468	29027	.	-	.	ID=gene-C9E94_RS01085;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=C9E94_RS01085;old_locus_tag=C9E94_01105
NZ_PYJR01000012.1	Protein Homology	CDS	27468	29027	.	-	0	ID=cds-WP_135400742.1;Parent=gene-C9E94_RS01085;Dbxref=GenBank:WP_135400742.1;Name=WP_135400742.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460784.2;locus_tag=C9E94_RS01085;product=CNNM family cation transport protein YoaE;protein_id=WP_135400742.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	29015	29347	.	-	.	ID=gene-C9E94_RS23840;Name=C9E94_RS23840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23840;old_locus_tag=C9E94_01110
NZ_PYJR01000012.1	Protein Homology	CDS	29015	29347	.	-	0	ID=cds-WP_371061699.1;Parent=gene-C9E94_RS23840;Dbxref=GenBank:WP_371061699.1;Name=WP_371061699.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046943.2;locus_tag=C9E94_RS23840;product=protein YoaL;protein_id=WP_371061699.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	29500	30468	.	+	.	ID=gene-C9E94_RS01090;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=C9E94_RS01090;old_locus_tag=C9E94_01115
NZ_PYJR01000012.1	Protein Homology	CDS	29500	30468	.	+	0	ID=cds-WP_000150521.1;Parent=gene-C9E94_RS01090;Dbxref=GenBank:WP_000150521.1;Name=WP_000150521.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460786.1;locus_tag=C9E94_RS01090;product=PTS mannose transporter subunit IIAB;protein_id=WP_000150521.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	30521	31321	.	+	.	ID=gene-C9E94_RS01095;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=C9E94_RS01095;old_locus_tag=C9E94_01120
NZ_PYJR01000012.1	Protein Homology	CDS	30521	31321	.	+	0	ID=cds-WP_000406920.1;Parent=gene-C9E94_RS01095;Dbxref=GenBank:WP_000406920.1;Name=WP_000406920.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=C9E94_RS01095;product=PTS mannose transporter subunit IIC;protein_id=WP_000406920.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	31334	32185	.	+	.	ID=gene-C9E94_RS01100;Name=C9E94_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01100;old_locus_tag=C9E94_01125
NZ_PYJR01000012.1	Protein Homology	CDS	31334	32185	.	+	0	ID=cds-WP_001518647.1;Parent=gene-C9E94_RS01100;Dbxref=GenBank:WP_001518647.1;Name=WP_001518647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228151.1;locus_tag=C9E94_RS01100;product=PTS mannose transporter subunit IID;protein_id=WP_001518647.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	32243	32701	.	+	.	ID=gene-C9E94_RS01105;Name=C9E94_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01105;old_locus_tag=C9E94_01130
NZ_PYJR01000012.1	Protein Homology	CDS	32243	32701	.	+	0	ID=cds-WP_000156280.1;Parent=gene-C9E94_RS01105;Dbxref=GenBank:WP_000156280.1;Name=WP_000156280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=C9E94_RS01105;product=DUF986 family protein;protein_id=WP_000156280.1;transl_table=11
NZ_PYJR01000012.1	cmsearch	riboswitch	32898	32999	.	+	.	ID=id-NZ_PYJR01000012.1:32898..32999;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PYJR01000012.1	RefSeq	gene	33111	33677	.	+	.	ID=gene-C9E94_RS01110;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=C9E94_RS01110;old_locus_tag=C9E94_01140
NZ_PYJR01000012.1	Protein Homology	CDS	33111	33677	.	+	0	ID=cds-WP_001518359.1;Parent=gene-C9E94_RS01110;Dbxref=GenBank:WP_001518359.1;Name=WP_001518359.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=C9E94_RS01110;product=manganese efflux pump MntP;protein_id=WP_001518359.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	33674	34483	.	-	.	ID=gene-C9E94_RS01115;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=C9E94_RS01115;old_locus_tag=C9E94_01145
NZ_PYJR01000012.1	Protein Homology	CDS	33674	34483	.	-	0	ID=cds-WP_000010924.1;Parent=gene-C9E94_RS01115;Dbxref=GenBank:WP_000010924.1;Name=WP_000010924.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460791.1;locus_tag=C9E94_RS01115;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_000010924.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	34549	36294	.	-	.	ID=gene-C9E94_RS01120;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=C9E94_RS01120;old_locus_tag=C9E94_01150
NZ_PYJR01000012.1	Protein Homology	CDS	34549	36294	.	-	0	ID=cds-WP_000730322.1;Parent=gene-C9E94_RS01120;Dbxref=GenBank:WP_000730322.1;Name=WP_000730322.1;Ontology_term=GO:0009252,GO:0051301,GO:0008658,GO:0008955,GO:0005886;gbkey=CDS;gene=ftsI;go_component=plasma membrane|0005886||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460792.1;locus_tag=C9E94_RS01120;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000730322.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	36514	36723	.	-	.	ID=gene-C9E94_RS01125;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=C9E94_RS01125;old_locus_tag=C9E94_01155
NZ_PYJR01000012.1	Protein Homology	CDS	36514	36723	.	-	0	ID=cds-WP_001062678.1;Parent=gene-C9E94_RS01125;Dbxref=GenBank:WP_001062678.1;Name=WP_001062678.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=C9E94_RS01125;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	36736	36879	.	-	.	ID=gene-C9E94_RS01130;Name=C9E94_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01130;old_locus_tag=C9E94_01160
NZ_PYJR01000012.1	Protein Homology	CDS	36736	36879	.	-	0	ID=cds-WP_001537930.1;Parent=gene-C9E94_RS01130;Dbxref=GenBank:WP_001537930.1;Name=WP_001537930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460794.1;locus_tag=C9E94_RS01130;product=DUF2627 domain-containing protein;protein_id=WP_001537930.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	37527	37814	.	-	.	ID=gene-C9E94_RS01135;Name=C9E94_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01135;old_locus_tag=C9E94_01165
NZ_PYJR01000012.1	Protein Homology	CDS	37527	37814	.	-	0	ID=cds-WP_001000660.1;Parent=gene-C9E94_RS01135;Dbxref=GenBank:WP_001000660.1;Name=WP_001000660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460795.1;locus_tag=C9E94_RS01135;product=YebO family protein;protein_id=WP_001000660.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	37885	38028	.	-	.	ID=gene-C9E94_RS01140;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=C9E94_RS01140;old_locus_tag=C9E94_01170
NZ_PYJR01000012.1	Protein Homology	CDS	37885	38028	.	-	0	ID=cds-WP_000714547.1;Parent=gene-C9E94_RS01140;Dbxref=GenBank:WP_000714547.1;Name=WP_000714547.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460796.1;locus_tag=C9E94_RS01140;product=PhoP/PhoQ regulator MgrB;protein_id=WP_000714547.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	38186	38425	.	+	.	ID=gene-C9E94_RS01145;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=C9E94_RS01145;old_locus_tag=C9E94_01175
NZ_PYJR01000012.1	Protein Homology	CDS	38186	38425	.	+	0	ID=cds-WP_001236777.1;Parent=gene-C9E94_RS01145;Dbxref=GenBank:WP_001236777.1;Name=WP_001236777.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460797.1;locus_tag=C9E94_RS01145;product=invasion protein YobH;protein_id=WP_001236777.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	38637	39428	.	-	.	ID=gene-C9E94_RS01150;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=C9E94_RS01150;old_locus_tag=C9E94_01180
NZ_PYJR01000012.1	Protein Homology	CDS	38637	39428	.	-	0	ID=cds-WP_001262195.1;Parent=gene-C9E94_RS01150;Dbxref=GenBank:WP_001262195.1;Name=WP_001262195.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460798.1;locus_tag=C9E94_RS01150;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_001262195.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	39604	40977	.	+	.	ID=gene-C9E94_RS01155;Name=C9E94_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01155;old_locus_tag=C9E94_01185
NZ_PYJR01000012.1	Protein Homology	CDS	39604	40977	.	+	0	ID=cds-WP_000416129.1;Parent=gene-C9E94_RS01155;Dbxref=GenBank:WP_000416129.1;Name=WP_000416129.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460799.1;locus_tag=C9E94_RS01155;product=MFS transporter;protein_id=WP_000416129.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	41025	41906	.	-	.	ID=gene-C9E94_RS01160;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=C9E94_RS01160;old_locus_tag=C9E94_01190
NZ_PYJR01000012.1	Protein Homology	CDS	41025	41906	.	-	0	ID=cds-WP_000984498.1;Parent=gene-C9E94_RS01160;Dbxref=GenBank:WP_000984498.1;Name=WP_000984498.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=C9E94_RS01160;product=protease HtpX;protein_id=WP_000984498.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	42099	44147	.	-	.	ID=gene-C9E94_RS01165;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;gene_synonym=tsp;locus_tag=C9E94_RS01165;old_locus_tag=C9E94_01195
NZ_PYJR01000012.1	Protein Homology	CDS	42099	44147	.	-	0	ID=cds-WP_001091237.1;Parent=gene-C9E94_RS01165;Dbxref=GenBank:WP_001091237.1;Name=WP_001091237.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460801.1;locus_tag=C9E94_RS01165;product=carboxy terminal-processing peptidase;protein_id=WP_001091237.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	44167	44853	.	-	.	ID=gene-C9E94_RS01170;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=C9E94_RS01170;old_locus_tag=C9E94_01200
NZ_PYJR01000012.1	Protein Homology	CDS	44167	44853	.	-	0	ID=cds-WP_000431401.1;Parent=gene-C9E94_RS01170;Dbxref=GenBank:WP_000431401.1;Name=WP_000431401.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460802.1;locus_tag=C9E94_RS01170;product=RNA chaperone ProQ;protein_id=WP_000431401.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	44951	45448	.	-	.	ID=gene-C9E94_RS01175;Name=C9E94_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01175;old_locus_tag=C9E94_01205
NZ_PYJR01000012.1	Protein Homology	CDS	44951	45448	.	-	0	ID=cds-WP_001518229.1;Parent=gene-C9E94_RS01175;Dbxref=GenBank:WP_001518229.1;Name=WP_001518229.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=C9E94_RS01175;product=GAF domain-containing protein;protein_id=WP_001518229.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	45577	46860	.	+	.	ID=gene-C9E94_RS01180;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=C9E94_RS01180;old_locus_tag=C9E94_01210
NZ_PYJR01000012.1	Protein Homology	CDS	45577	46860	.	+	0	ID=cds-WP_001207294.1;Parent=gene-C9E94_RS01180;Dbxref=GenBank:WP_001207294.1;Name=WP_001207294.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460804.1;locus_tag=C9E94_RS01180;product=membrane integrity lipid transport subunit YebS;protein_id=WP_001207294.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	46829	49462	.	+	.	ID=gene-C9E94_RS01185;Name=C9E94_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01185;old_locus_tag=C9E94_01215
NZ_PYJR01000012.1	Protein Homology	CDS	46829	49462	.	+	0	ID=cds-WP_001535256.1;Parent=gene-C9E94_RS01185;Dbxref=GenBank:WP_001535256.1;Name=WP_001535256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=C9E94_RS01185;product=PqiB family protein;protein_id=WP_001535256.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	49540	50979	.	+	.	ID=gene-C9E94_RS01190;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=C9E94_RS01190;old_locus_tag=C9E94_01220
NZ_PYJR01000012.1	Protein Homology	CDS	49540	50979	.	+	0	ID=cds-WP_135400743.1;Parent=gene-C9E94_RS01190;Dbxref=GenBank:WP_135400743.1;Name=WP_135400743.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460806.1;locus_tag=C9E94_RS01190;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_135400743.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	51097	51333	.	+	.	ID=gene-C9E94_RS01195;Name=C9E94_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01195;old_locus_tag=C9E94_01225
NZ_PYJR01000012.1	Protein Homology	CDS	51097	51333	.	+	0	ID=cds-WP_024131167.1;Parent=gene-C9E94_RS01195;Dbxref=GenBank:WP_024131167.1;Name=WP_024131167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=C9E94_RS01195;product=YebV family protein;protein_id=WP_024131167.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	51444	51635	.	+	.	ID=gene-C9E94_RS01200;Name=C9E94_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01200;old_locus_tag=C9E94_01230
NZ_PYJR01000012.1	Protein Homology	CDS	51444	51635	.	+	0	ID=cds-WP_000457836.1;Parent=gene-C9E94_RS01200;Dbxref=GenBank:WP_000457836.1;Name=WP_000457836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460808.1;locus_tag=C9E94_RS01200;product=YebW family protein;protein_id=WP_000457836.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	51654	52304	.	-	.	ID=gene-C9E94_RS01205;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=C9E94_RS01205;old_locus_tag=C9E94_01235
NZ_PYJR01000012.1	Protein Homology	CDS	51654	52304	.	-	0	ID=cds-WP_079828484.1;Parent=gene-C9E94_RS01205;Dbxref=GenBank:WP_079828484.1;Name=WP_079828484.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460809.1;locus_tag=C9E94_RS01205;product=protein-serine/threonine phosphatase;protein_id=WP_079828484.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	52322	52537	.	-	.	ID=gene-C9E94_RS23765;Name=C9E94_RS23765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23765
NZ_PYJR01000012.1	Protein Homology	CDS	52322	52537	.	-	0	ID=cds-WP_001574231.1;Parent=gene-C9E94_RS23765;Dbxref=GenBank:WP_001574231.1;Name=WP_001574231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001529227.1;locus_tag=C9E94_RS23765;product=hypothetical protein;protein_id=WP_001574231.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	52528	52692	.	-	.	ID=gene-C9E94_RS01210;Name=C9E94_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01210;old_locus_tag=C9E94_01240
NZ_PYJR01000012.1	Protein Homology	CDS	52528	52692	.	-	0	ID=cds-WP_001134856.1;Parent=gene-C9E94_RS01210;Dbxref=GenBank:WP_001134856.1;Name=WP_001134856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460810.1;locus_tag=C9E94_RS01210;product=membrane protein;protein_id=WP_001134856.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	52977	53699	.	-	.	ID=gene-C9E94_RS01215;Name=sopE2;gbkey=Gene;gene=sopE2;gene_biotype=protein_coding;locus_tag=C9E94_RS01215;old_locus_tag=C9E94_01245
NZ_PYJR01000012.1	Protein Homology	CDS	52977	53699	.	-	0	ID=cds-WP_000182072.1;Parent=gene-C9E94_RS01215;Dbxref=GenBank:WP_000182072.1;Name=WP_000182072.1;gbkey=CDS;gene=sopE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460811.1;locus_tag=C9E94_RS01215;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE2;protein_id=WP_000182072.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	54383	54778	.	+	.	ID=gene-C9E94_RS01220;Name=C9E94_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01220;old_locus_tag=C9E94_01250
NZ_PYJR01000012.1	Protein Homology	CDS	54383	54778	.	+	0	ID=cds-WP_000422887.1;Parent=gene-C9E94_RS01220;Dbxref=GenBank:WP_000422887.1;Name=WP_000422887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460812.1;locus_tag=C9E94_RS01220;product=DUF1398 domain-containing protein;protein_id=WP_000422887.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	55107	55583	.	+	.	ID=gene-C9E94_RS01225;Name=C9E94_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01225;old_locus_tag=C9E94_01255
NZ_PYJR01000012.1	Protein Homology	CDS	55107	55583	.	+	0	ID=cds-WP_135400744.1;Parent=gene-C9E94_RS01225;Dbxref=GenBank:WP_135400744.1;Name=WP_135400744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000030934.1;locus_tag=C9E94_RS01225;product=hypothetical protein;protein_id=WP_135400744.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	55956	56375	.	-	.	ID=gene-C9E94_RS01230;Name=C9E94_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01230;old_locus_tag=C9E94_01260
NZ_PYJR01000012.1	Protein Homology	CDS	55956	56375	.	-	0	ID=cds-WP_000354408.1;Parent=gene-C9E94_RS01230;Dbxref=GenBank:WP_000354408.1;Name=WP_000354408.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460813.1;locus_tag=C9E94_RS01230;product=GNAT family N-acetyltransferase;protein_id=WP_000354408.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	56745	57014	.	+	.	ID=gene-C9E94_RS01240;Name=C9E94_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01240;old_locus_tag=C9E94_01270
NZ_PYJR01000012.1	Protein Homology	CDS	56745	57014	.	+	0	ID=cds-WP_001752421.1;Parent=gene-C9E94_RS01240;Dbxref=GenBank:WP_001752421.1;Name=WP_001752421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460814.1;locus_tag=C9E94_RS01240;product=hypothetical protein;protein_id=WP_001752421.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	gene	57180	57320	.	+	.	ID=gene-C9E94_RS01245;Name=C9E94_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01245;old_locus_tag=C9E94_01275
NZ_PYJR01000012.1	Protein Homology	CDS	57180	57320	.	+	0	ID=cds-WP_001617922.1;Parent=gene-C9E94_RS01245;Dbxref=GenBank:WP_001617922.1;Name=WP_001617922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460815.3;locus_tag=C9E94_RS01245;product=hypothetical protein;protein_id=WP_001617922.1;transl_table=11
NZ_PYJR01000012.1	RefSeq	pseudogene	57466	58660	.	-	.	ID=gene-C9E94_RS01250;Name=C9E94_RS01250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS01250;old_locus_tag=C9E94_01280;pseudo=true
NZ_PYJR01000012.1	Protein Homology	CDS	57466	58660	.	-	0	ID=cds-C9E94_RS01250;Parent=gene-C9E94_RS01250;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=C9E94_RS01250;product=IS256 family transposase;pseudo=true;transl_table=11
NZ_PYJR01000012.1	RefSeq	pseudogene	58730	59152	.	+	.	ID=gene-C9E94_RS01255;Name=C9E94_RS01255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS01255;old_locus_tag=C9E94_01285;partial=true;pseudo=true;start_range=.,58730
NZ_PYJR01000012.1	Protein Homology	CDS	58730	59152	.	+	0	ID=cds-C9E94_RS01255;Parent=gene-C9E94_RS01255;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001189081.1;locus_tag=C9E94_RS01255;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,58730;transl_table=11
##sequence-region NZ_PYJR01000092.1 1 58505
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000092.1	RefSeq	region	1	58505	.	+	.	ID=NZ_PYJR01000092.1:1..58505;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000092.1	RefSeq	gene	121	687	.	-	.	ID=gene-C9E94_RS12170;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=C9E94_RS12170;old_locus_tag=C9E94_12445
NZ_PYJR01000092.1	Protein Homology	CDS	121	687	.	-	0	ID=cds-WP_023993926.1;Parent=gene-C9E94_RS12170;Dbxref=GenBank:WP_023993926.1;Name=WP_023993926.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459252.1;locus_tag=C9E94_RS12170;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_023993926.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	877	1908	.	+	.	ID=gene-C9E94_RS12175;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=C9E94_RS12175;old_locus_tag=C9E94_12450
NZ_PYJR01000092.1	Protein Homology	CDS	877	1908	.	+	0	ID=cds-WP_000594015.1;Parent=gene-C9E94_RS12175;Dbxref=GenBank:WP_000594015.1;Name=WP_000594015.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=C9E94_RS12175;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_000594015.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	1901	2554	.	+	.	ID=gene-C9E94_RS12180;Name=C9E94_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12180;old_locus_tag=C9E94_12455
NZ_PYJR01000092.1	Protein Homology	CDS	1901	2554	.	+	0	ID=cds-WP_001287486.1;Parent=gene-C9E94_RS12180;Dbxref=GenBank:WP_001287486.1;Name=WP_001287486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=C9E94_RS12180;product=methionine ABC transporter permease MetI;protein_id=WP_001287486.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	2593	3408	.	+	.	ID=gene-C9E94_RS12185;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=C9E94_RS12185;old_locus_tag=C9E94_12460
NZ_PYJR01000092.1	Protein Homology	CDS	2593	3408	.	+	0	ID=cds-WP_000874215.1;Parent=gene-C9E94_RS12185;Dbxref=GenBank:WP_000874215.1;Name=WP_000874215.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459249.1;locus_tag=C9E94_RS12185;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_000874215.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	3527	3931	.	+	.	ID=gene-C9E94_RS12190;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=C9E94_RS12190;old_locus_tag=C9E94_12465
NZ_PYJR01000092.1	Protein Homology	CDS	3527	3931	.	+	0	ID=cds-WP_001202315.1;Parent=gene-C9E94_RS12190;Dbxref=GenBank:WP_001202315.1;Name=WP_001202315.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459248.1;locus_tag=C9E94_RS12190;product=Rcs stress response system protein RcsF;protein_id=WP_001202315.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	3928	4635	.	+	.	ID=gene-C9E94_RS12195;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=C9E94_RS12195;old_locus_tag=C9E94_12470
NZ_PYJR01000092.1	Protein Homology	CDS	3928	4635	.	+	0	ID=cds-WP_000093986.1;Parent=gene-C9E94_RS12195;Dbxref=GenBank:WP_000093986.1;Name=WP_000093986.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459247.1;locus_tag=C9E94_RS12195;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_000093986.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	4746	6464	.	+	.	ID=gene-C9E94_RS12200;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=C9E94_RS12200;old_locus_tag=C9E94_12475
NZ_PYJR01000092.1	Protein Homology	CDS	4746	6464	.	+	0	ID=cds-WP_001260683.1;Parent=gene-C9E94_RS12200;Dbxref=GenBank:WP_001260683.1;Name=WP_001260683.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=C9E94_RS12200;product=proline--tRNA ligase;protein_id=WP_001260683.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	6538	7239	.	-	.	ID=gene-C9E94_RS12205;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=C9E94_RS12205;old_locus_tag=C9E94_12480
NZ_PYJR01000092.1	Protein Homology	CDS	6538	7239	.	-	0	ID=cds-WP_135401045.1;Parent=gene-C9E94_RS12205;Dbxref=GenBank:WP_135401045.1;Name=WP_135401045.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006899150.1;locus_tag=C9E94_RS12205;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_135401045.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	7271	7693	.	-	.	ID=gene-C9E94_RS12210;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=C9E94_RS12210;old_locus_tag=C9E94_12485
NZ_PYJR01000092.1	Protein Homology	CDS	7271	7693	.	-	0	ID=cds-WP_000560527.1;Parent=gene-C9E94_RS12210;Dbxref=GenBank:WP_000560527.1;Name=WP_000560527.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459245.1;locus_tag=C9E94_RS12210;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_000560527.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	7690	8235	.	-	.	ID=gene-C9E94_RS12215;Name=C9E94_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12215;old_locus_tag=C9E94_12490
NZ_PYJR01000092.1	Protein Homology	CDS	7690	8235	.	-	0	ID=cds-WP_001185319.1;Parent=gene-C9E94_RS12215;Dbxref=GenBank:WP_001185319.1;Name=WP_001185319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459244.1;locus_tag=C9E94_RS12215;product=YaeQ family protein;protein_id=WP_001185319.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	8433	8633	.	+	.	ID=gene-C9E94_RS12220;Name=C9E94_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12220;old_locus_tag=C9E94_12495
NZ_PYJR01000092.1	Protein Homology	CDS	8433	8633	.	+	0	ID=cds-WP_001518678.1;Parent=gene-C9E94_RS12220;Dbxref=GenBank:WP_001518678.1;Name=WP_001518678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=C9E94_RS12220;product=YaeP family protein;protein_id=WP_001518678.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	8620	8880	.	+	.	ID=gene-C9E94_RS12225;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=C9E94_RS12225;old_locus_tag=C9E94_12500
NZ_PYJR01000092.1	Protein Homology	CDS	8620	8880	.	+	0	ID=cds-WP_000062330.1;Parent=gene-C9E94_RS12225;Dbxref=GenBank:WP_000062330.1;Name=WP_000062330.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459242.1;locus_tag=C9E94_RS12225;product=Rho-binding antiterminator;protein_id=WP_000062330.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	8964	10256	.	-	.	ID=gene-C9E94_RS12230;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=C9E94_RS12230;old_locus_tag=C9E94_12505
NZ_PYJR01000092.1	Protein Homology	CDS	8964	10256	.	-	0	ID=cds-WP_023993164.1;Parent=gene-C9E94_RS12230;Dbxref=GenBank:WP_023993164.1;Name=WP_023993164.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459241.1;locus_tag=C9E94_RS12230;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_023993164.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	10319	10708	.	-	.	ID=gene-C9E94_RS12235;Name=C9E94_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12235;old_locus_tag=C9E94_12510
NZ_PYJR01000092.1	Protein Homology	CDS	10319	10708	.	-	0	ID=cds-WP_000901088.1;Parent=gene-C9E94_RS12235;Dbxref=GenBank:WP_000901088.1;Name=WP_000901088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459240.1;locus_tag=C9E94_RS12235;product=VOC family protein;protein_id=WP_000901088.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	10764	12905	.	-	.	ID=gene-C9E94_RS12240;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=C9E94_RS12240;old_locus_tag=C9E94_12515
NZ_PYJR01000092.1	Protein Homology	CDS	10764	12905	.	-	0	ID=cds-WP_135401046.1;Parent=gene-C9E94_RS12240;Dbxref=GenBank:WP_135401046.1;Name=WP_135401046.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459239.1;locus_tag=C9E94_RS12240;product=lysine decarboxylase LdcC;protein_id=WP_135401046.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	12981	14744	.	-	.	ID=gene-C9E94_RS12245;Name=C9E94_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12245;old_locus_tag=C9E94_12520
NZ_PYJR01000092.1	Protein Homology	CDS	12981	14744	.	-	0	ID=cds-WP_000524171.1;Parent=gene-C9E94_RS12245;Dbxref=GenBank:WP_000524171.1;Name=WP_000524171.1;Ontology_term=GO:0006032,GO:0016998,GO:0004568;gbkey=CDS;go_function=chitinase activity|0004568||IEA;go_process=chitin catabolic process|0006032||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459238.1;locus_tag=C9E94_RS12245;product=chitinase;protein_id=WP_000524171.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	14924	15883	.	-	.	ID=gene-C9E94_RS12250;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=C9E94_RS12250;old_locus_tag=C9E94_12525
NZ_PYJR01000092.1	Protein Homology	CDS	14924	15883	.	-	0	ID=cds-WP_000055753.1;Parent=gene-C9E94_RS12250;Dbxref=GenBank:WP_000055753.1;Name=WP_000055753.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=C9E94_RS12250;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_000055753.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	15896	19378	.	-	.	ID=gene-C9E94_RS12255;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=C9E94_RS12255;old_locus_tag=C9E94_12530
NZ_PYJR01000092.1	Protein Homology	CDS	15896	19378	.	-	0	ID=cds-WP_001294831.1;Parent=gene-C9E94_RS12255;Dbxref=GenBank:WP_001294831.1;Name=WP_001294831.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459236.1;locus_tag=C9E94_RS12255;product=DNA polymerase III subunit alpha;protein_id=WP_001294831.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	19402	19998	.	-	.	ID=gene-C9E94_RS12260;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=C9E94_RS12260;old_locus_tag=C9E94_12535
NZ_PYJR01000092.1	Protein Homology	CDS	19402	19998	.	-	0	ID=cds-WP_000569411.1;Parent=gene-C9E94_RS12260;Dbxref=GenBank:WP_000569411.1;Name=WP_000569411.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459235.1;locus_tag=C9E94_RS12260;product=ribonuclease HII;protein_id=WP_000569411.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	19995	21143	.	-	.	ID=gene-C9E94_RS12265;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=C9E94_RS12265;old_locus_tag=C9E94_12540
NZ_PYJR01000092.1	Protein Homology	CDS	19995	21143	.	-	0	ID=cds-WP_000741216.1;Parent=gene-C9E94_RS12265;Dbxref=GenBank:WP_000741216.1;Name=WP_000741216.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459234.1;locus_tag=C9E94_RS12265;product=lipid-A-disaccharide synthase;protein_id=WP_000741216.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	21143	21931	.	-	.	ID=gene-C9E94_RS12270;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=C9E94_RS12270;old_locus_tag=C9E94_12545
NZ_PYJR01000092.1	Protein Homology	CDS	21143	21931	.	-	0	ID=cds-WP_000565950.1;Parent=gene-C9E94_RS12270;Dbxref=GenBank:WP_000565950.1;Name=WP_000565950.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=C9E94_RS12270;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_000565950.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	21935	22390	.	-	.	ID=gene-C9E94_RS12275;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=C9E94_RS12275;old_locus_tag=C9E94_12550
NZ_PYJR01000092.1	Protein Homology	CDS	21935	22390	.	-	0	ID=cds-WP_000210741.1;Parent=gene-C9E94_RS12275;Dbxref=GenBank:WP_000210741.1;Name=WP_000210741.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=C9E94_RS12275;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000210741.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	22496	23521	.	-	.	ID=gene-C9E94_RS12280;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=C9E94_RS12280;old_locus_tag=C9E94_12555
NZ_PYJR01000092.1	Protein Homology	CDS	22496	23521	.	-	0	ID=cds-WP_001139265.1;Parent=gene-C9E94_RS12280;Dbxref=GenBank:WP_001139265.1;Name=WP_001139265.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=C9E94_RS12280;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_001139265.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	23525	24010	.	-	.	ID=gene-C9E94_RS12285;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=C9E94_RS12285;old_locus_tag=C9E94_12560
NZ_PYJR01000092.1	Protein Homology	CDS	23525	24010	.	-	0	ID=cds-WP_000758966.1;Parent=gene-C9E94_RS12285;Dbxref=GenBank:WP_000758966.1;Name=WP_000758966.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459230.1;locus_tag=C9E94_RS12285;product=molecular chaperone Skp;protein_id=WP_000758966.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	24133	26544	.	-	.	ID=gene-C9E94_RS12290;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=C9E94_RS12290;old_locus_tag=C9E94_12565
NZ_PYJR01000092.1	Protein Homology	CDS	24133	26544	.	-	0	ID=cds-WP_135401047.1;Parent=gene-C9E94_RS12290;Dbxref=GenBank:WP_135401047.1;Name=WP_135401047.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459229.1;locus_tag=C9E94_RS12290;product=outer membrane protein assembly factor BamA;protein_id=WP_135401047.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	26576	27928	.	-	.	ID=gene-C9E94_RS12295;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=C9E94_RS12295;old_locus_tag=C9E94_12570
NZ_PYJR01000092.1	Protein Homology	CDS	26576	27928	.	-	0	ID=cds-WP_000949017.1;Parent=gene-C9E94_RS12295;Dbxref=GenBank:WP_000949017.1;Name=WP_000949017.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=C9E94_RS12295;product=sigma E protease regulator RseP;protein_id=WP_000949017.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	27940	28797	.	-	.	ID=gene-C9E94_RS12300;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=C9E94_RS12300;old_locus_tag=C9E94_12575
NZ_PYJR01000092.1	Protein Homology	CDS	27940	28797	.	-	0	ID=cds-WP_000922422.1;Parent=gene-C9E94_RS12300;Dbxref=GenBank:WP_000922422.1;Name=WP_000922422.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459227.1;locus_tag=C9E94_RS12300;product=phosphatidate cytidylyltransferase;protein_id=WP_000922422.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	28810	29568	.	-	.	ID=gene-C9E94_RS12305;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=C9E94_RS12305;old_locus_tag=C9E94_12580
NZ_PYJR01000092.1	Protein Homology	CDS	28810	29568	.	-	0	ID=cds-WP_000947413.1;Parent=gene-C9E94_RS12305;Dbxref=GenBank:WP_000947413.1;Name=WP_000947413.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459226.1;locus_tag=C9E94_RS12305;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_000947413.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	29881	31077	.	-	.	ID=gene-C9E94_RS12310;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=C9E94_RS12310;old_locus_tag=C9E94_12590
NZ_PYJR01000092.1	Protein Homology	CDS	29881	31077	.	-	0	ID=cds-WP_000811905.1;Parent=gene-C9E94_RS12310;Dbxref=GenBank:WP_000811905.1;Name=WP_000811905.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459225.1;locus_tag=C9E94_RS12310;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_000811905.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	31219	31776	.	-	.	ID=gene-C9E94_RS12315;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=C9E94_RS12315;old_locus_tag=C9E94_12595
NZ_PYJR01000092.1	Protein Homology	CDS	31219	31776	.	-	0	ID=cds-WP_000622423.1;Parent=gene-C9E94_RS12315;Dbxref=GenBank:WP_000622423.1;Name=WP_000622423.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=C9E94_RS12315;product=ribosome recycling factor;protein_id=WP_000622423.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	31923	32648	.	-	.	ID=gene-C9E94_RS12320;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=C9E94_RS12320;old_locus_tag=C9E94_12600
NZ_PYJR01000092.1	Protein Homology	CDS	31923	32648	.	-	0	ID=cds-WP_000224567.1;Parent=gene-C9E94_RS12320;Dbxref=GenBank:WP_000224567.1;Name=WP_000224567.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=C9E94_RS12320;product=UMP kinase;protein_id=WP_000224567.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	32793	33644	.	-	.	ID=gene-C9E94_RS12325;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=C9E94_RS12325;old_locus_tag=C9E94_12605
NZ_PYJR01000092.1	Protein Homology	CDS	32793	33644	.	-	0	ID=cds-WP_000808106.1;Parent=gene-C9E94_RS12325;Dbxref=GenBank:WP_000808106.1;Name=WP_000808106.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=C9E94_RS12325;product=translation elongation factor Ts;protein_id=WP_000808106.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	33902	34627	.	-	.	ID=gene-C9E94_RS12330;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=C9E94_RS12330;old_locus_tag=C9E94_12615
NZ_PYJR01000092.1	Protein Homology	CDS	33902	34627	.	-	0	ID=cds-WP_000246886.1;Parent=gene-C9E94_RS12330;Dbxref=GenBank:WP_000246886.1;Name=WP_000246886.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=C9E94_RS12330;product=30S ribosomal protein S2;protein_id=WP_000246886.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	35078	35872	.	+	.	ID=gene-C9E94_RS12335;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=C9E94_RS12335;old_locus_tag=C9E94_12620
NZ_PYJR01000092.1	Protein Homology	CDS	35078	35872	.	+	0	ID=cds-WP_001018214.1;Parent=gene-C9E94_RS12335;Dbxref=GenBank:WP_001018214.1;Name=WP_001018214.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459220.1;locus_tag=C9E94_RS12335;product=type I methionyl aminopeptidase;protein_id=WP_001018214.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	36110	38782	.	+	.	ID=gene-C9E94_RS12340;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=C9E94_RS12340;old_locus_tag=C9E94_12630
NZ_PYJR01000092.1	Protein Homology	CDS	36110	38782	.	+	0	ID=cds-WP_001094519.1;Parent=gene-C9E94_RS12340;Dbxref=GenBank:WP_001094519.1;Name=WP_001094519.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459219.1;locus_tag=C9E94_RS12340;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_001094519.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	38812	39636	.	+	.	ID=gene-C9E94_RS12345;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=C9E94_RS12345;old_locus_tag=C9E94_12635
NZ_PYJR01000092.1	Protein Homology	CDS	38812	39636	.	+	0	ID=cds-WP_001186673.1;Parent=gene-C9E94_RS12345;Dbxref=GenBank:WP_001186673.1;Name=WP_001186673.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=C9E94_RS12345;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186673.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	39672	40973	.	-	.	ID=gene-C9E94_RS12350;Name=C9E94_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12350;old_locus_tag=C9E94_12640
NZ_PYJR01000092.1	Protein Homology	CDS	39672	40973	.	-	0	ID=cds-WP_079949954.1;Parent=gene-C9E94_RS12350;Dbxref=GenBank:WP_079949954.1;Name=WP_079949954.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=C9E94_RS12350;product=MFS transporter;protein_id=WP_079949954.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	41220	41606	.	+	.	ID=gene-C9E94_RS12355;Name=C9E94_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12355;old_locus_tag=C9E94_12645
NZ_PYJR01000092.1	Protein Homology	CDS	41220	41606	.	+	0	ID=cds-WP_135401048.1;Parent=gene-C9E94_RS12355;Dbxref=GenBank:WP_135401048.1;Name=WP_135401048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=C9E94_RS12355;product=DUF3461 family protein;protein_id=WP_135401048.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	41695	42852	.	-	.	ID=gene-C9E94_RS12360;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=C9E94_RS12360;old_locus_tag=C9E94_12650
NZ_PYJR01000092.1	Protein Homology	CDS	41695	42852	.	-	0	ID=cds-WP_000929420.1;Parent=gene-C9E94_RS12360;Dbxref=GenBank:WP_000929420.1;Name=WP_000929420.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=C9E94_RS12360;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_000929420.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	43005	44432	.	-	.	ID=gene-C9E94_RS12365;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=C9E94_RS12365;old_locus_tag=C9E94_12655
NZ_PYJR01000092.1	Protein Homology	CDS	43005	44432	.	-	0	ID=cds-WP_000753961.1;Parent=gene-C9E94_RS12365;Dbxref=GenBank:WP_000753961.1;Name=WP_000753961.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=C9E94_RS12365;product=serine endoprotease DegP;protein_id=WP_000753961.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	44562	46079	.	-	.	ID=gene-C9E94_RS12370;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=C9E94_RS12370;old_locus_tag=C9E94_12660
NZ_PYJR01000092.1	Protein Homology	CDS	44562	46079	.	-	0	ID=cds-WP_000146450.1;Parent=gene-C9E94_RS12370;Dbxref=GenBank:WP_000146450.1;Name=WP_000146450.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459213.1;locus_tag=C9E94_RS12370;product=dGTPase;protein_id=WP_000146450.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	46164	46862	.	+	.	ID=gene-C9E94_RS12375;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=C9E94_RS12375;old_locus_tag=C9E94_12665
NZ_PYJR01000092.1	Protein Homology	CDS	46164	46862	.	+	0	ID=cds-WP_000689822.1;Parent=gene-C9E94_RS12375;Dbxref=GenBank:WP_000689822.1;Name=WP_000689822.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459212.1;locus_tag=C9E94_RS12375;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_000689822.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	46855	47655	.	+	.	ID=gene-C9E94_RS12380;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=C9E94_RS12380;old_locus_tag=C9E94_12670
NZ_PYJR01000092.1	Protein Homology	CDS	46855	47655	.	+	0	ID=cds-WP_001118845.1;Parent=gene-C9E94_RS12380;Dbxref=GenBank:WP_001118845.1;Name=WP_001118845.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459211.1;locus_tag=C9E94_RS12380;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_001118845.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	47692	48315	.	+	.	ID=gene-C9E94_RS12385;Name=C9E94_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12385;old_locus_tag=C9E94_12675
NZ_PYJR01000092.1	Protein Homology	CDS	47692	48315	.	+	0	ID=cds-WP_000964234.1;Parent=gene-C9E94_RS12385;Dbxref=GenBank:WP_000964234.1;Name=WP_000964234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459210.1;locus_tag=C9E94_RS12385;product=TRIC cation channel family protein;protein_id=WP_000964234.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	48416	48760	.	-	.	ID=gene-C9E94_RS12390;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=C9E94_RS12390;old_locus_tag=C9E94_12680
NZ_PYJR01000092.1	Protein Homology	CDS	48416	48760	.	-	0	ID=cds-WP_001278668.1;Parent=gene-C9E94_RS12390;Dbxref=GenBank:WP_001278668.1;Name=WP_001278668.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=C9E94_RS12390;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001278668.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	48842	50263	.	-	.	ID=gene-C9E94_RS12395;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=C9E94_RS12395;old_locus_tag=C9E94_12685
NZ_PYJR01000092.1	Protein Homology	CDS	48842	50263	.	-	0	ID=cds-WP_000845430.1;Parent=gene-C9E94_RS12395;Dbxref=GenBank:WP_000845430.1;Name=WP_000845430.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459208.1;locus_tag=C9E94_RS12395;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_000845430.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	50433	51713	.	+	.	ID=gene-C9E94_RS12400;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=C9E94_RS12400;old_locus_tag=C9E94_12690
NZ_PYJR01000092.1	Protein Homology	CDS	50433	51713	.	+	0	ID=cds-WP_000045262.1;Parent=gene-C9E94_RS12400;Dbxref=GenBank:WP_000045262.1;Name=WP_000045262.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=C9E94_RS12400;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_000045262.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	51822	52661	.	-	.	ID=gene-C9E94_RS12405;Name=stfH;gbkey=Gene;gene=stfH;gene_biotype=protein_coding;locus_tag=C9E94_RS12405;old_locus_tag=C9E94_12695
NZ_PYJR01000092.1	Protein Homology	CDS	51822	52661	.	-	0	ID=cds-WP_001669135.1;Parent=gene-C9E94_RS12405;Dbxref=GenBank:WP_001669135.1;Name=WP_001669135.1;gbkey=CDS;gene=stfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459206.1;locus_tag=C9E94_RS12405;product=fimbrial adhesin StfH;protein_id=WP_001669135.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	52661	53191	.	-	.	ID=gene-C9E94_RS12410;Name=C9E94_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12410;old_locus_tag=C9E94_12700
NZ_PYJR01000092.1	Protein Homology	CDS	52661	53191	.	-	0	ID=cds-WP_001129315.1;Parent=gene-C9E94_RS12410;Dbxref=GenBank:WP_001129315.1;Name=WP_001129315.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459205.1;locus_tag=C9E94_RS12410;product=fimbrial protein;protein_id=WP_001129315.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	53191	53667	.	-	.	ID=gene-C9E94_RS12415;Name=stfF;gbkey=Gene;gene=stfF;gene_biotype=protein_coding;locus_tag=C9E94_RS12415;old_locus_tag=C9E94_12705
NZ_PYJR01000092.1	Protein Homology	CDS	53191	53667	.	-	0	ID=cds-WP_000725074.1;Parent=gene-C9E94_RS12415;Dbxref=GenBank:WP_000725074.1;Name=WP_000725074.1;gbkey=CDS;gene=stfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459204.1;locus_tag=C9E94_RS12415;product=fimbrial minor subunit StfF;protein_id=WP_000725074.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	53664	54176	.	-	.	ID=gene-C9E94_RS12420;Name=C9E94_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12420;old_locus_tag=C9E94_12710
NZ_PYJR01000092.1	Protein Homology	CDS	53664	54176	.	-	0	ID=cds-WP_001250313.1;Parent=gene-C9E94_RS12420;Dbxref=GenBank:WP_001250313.1;Name=WP_001250313.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459203.1;locus_tag=C9E94_RS12420;product=fimbrial protein;protein_id=WP_001250313.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	54195	54947	.	-	.	ID=gene-C9E94_RS12425;Name=stfD;gbkey=Gene;gene=stfD;gene_biotype=protein_coding;locus_tag=C9E94_RS12425;old_locus_tag=C9E94_12715
NZ_PYJR01000092.1	Protein Homology	CDS	54195	54947	.	-	0	ID=cds-WP_000982726.1;Parent=gene-C9E94_RS12425;Dbxref=GenBank:WP_000982726.1;Name=WP_000982726.1;gbkey=CDS;gene=stfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459202.1;locus_tag=C9E94_RS12425;product=fimbrial chaperone StfD;protein_id=WP_000982726.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	54965	57622	.	-	.	ID=gene-C9E94_RS12430;Name=C9E94_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12430;old_locus_tag=C9E94_12720
NZ_PYJR01000092.1	Protein Homology	CDS	54965	57622	.	-	0	ID=cds-WP_061378378.1;Parent=gene-C9E94_RS12430;Dbxref=GenBank:WP_061378378.1;Name=WP_061378378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459201.1;locus_tag=C9E94_RS12430;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_061378378.1;transl_table=11
NZ_PYJR01000092.1	RefSeq	gene	57708	58268	.	-	.	ID=gene-C9E94_RS12435;Name=stfA;gbkey=Gene;gene=stfA;gene_biotype=protein_coding;locus_tag=C9E94_RS12435;old_locus_tag=C9E94_12725
NZ_PYJR01000092.1	Protein Homology	CDS	57708	58268	.	-	0	ID=cds-WP_001090554.1;Parent=gene-C9E94_RS12435;Dbxref=GenBank:WP_001090554.1;Name=WP_001090554.1;gbkey=CDS;gene=stfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459200.1;locus_tag=C9E94_RS12435;product=fimbrial major subunit StfA;protein_id=WP_001090554.1;transl_table=11
##sequence-region NZ_PYJR01000027.1 1 56391
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000027.1	RefSeq	region	1	56391	.	+	.	ID=NZ_PYJR01000027.1:1..56391;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000027.1	RefSeq	gene	217	1101	.	-	.	ID=gene-C9E94_RS02415;Name=C9E94_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02415;old_locus_tag=C9E94_02485
NZ_PYJR01000027.1	Protein Homology	CDS	217	1101	.	-	0	ID=cds-WP_000438892.1;Parent=gene-C9E94_RS02415;Dbxref=GenBank:WP_000438892.1;Name=WP_000438892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461355.1;locus_tag=C9E94_RS02415;product=LysR family transcriptional regulator;protein_id=WP_000438892.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	1153	1311	.	-	.	ID=gene-C9E94_RS02420;Name=C9E94_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02420;old_locus_tag=C9E94_02490
NZ_PYJR01000027.1	Protein Homology	CDS	1153	1311	.	-	0	ID=cds-WP_000658727.1;Parent=gene-C9E94_RS02420;Dbxref=GenBank:WP_000658727.1;Name=WP_000658727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658729.1;locus_tag=C9E94_RS02420;product=XapX domain-containing protein;protein_id=WP_000658727.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	1370	2626	.	-	.	ID=gene-C9E94_RS02425;Name=C9E94_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02425;old_locus_tag=C9E94_02495
NZ_PYJR01000027.1	Protein Homology	CDS	1370	2626	.	-	0	ID=cds-WP_000513241.1;Parent=gene-C9E94_RS02425;Dbxref=GenBank:WP_000513241.1;Name=WP_000513241.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461356.1;locus_tag=C9E94_RS02425;product=nucleoside permease;protein_id=WP_000513241.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	2681	3514	.	-	.	ID=gene-C9E94_RS02430;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=C9E94_RS02430;old_locus_tag=C9E94_02500
NZ_PYJR01000027.1	Protein Homology	CDS	2681	3514	.	-	0	ID=cds-WP_001119748.1;Parent=gene-C9E94_RS02430;Dbxref=GenBank:WP_001119748.1;Name=WP_001119748.1;Ontology_term=GO:0055086,GO:0004731,GO:0005737;gbkey=CDS;gene=xapA;go_component=cytoplasm|0005737||IEA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing small molecule metabolic process|0055086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448816.1;locus_tag=C9E94_RS02430;product=xanthosine phosphorylase;protein_id=WP_001119748.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	3770	4531	.	+	.	ID=gene-C9E94_RS02435;Name=C9E94_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02435;old_locus_tag=C9E94_02505
NZ_PYJR01000027.1	Protein Homology	CDS	3770	4531	.	+	0	ID=cds-WP_001660574.1;Parent=gene-C9E94_RS02435;Dbxref=GenBank:WP_001660574.1;Name=WP_001660574.1;Ontology_term=GO:0015858,GO:0015471,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside-specific channel forming porin activity|0015471||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461358.1;locus_tag=C9E94_RS02435;product=nucleoside-specific channel-forming Tsx family protein;protein_id=WP_001660574.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	4593	5519	.	-	.	ID=gene-C9E94_RS02440;Name=C9E94_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02440;old_locus_tag=C9E94_02510
NZ_PYJR01000027.1	Protein Homology	CDS	4593	5519	.	-	0	ID=cds-WP_001109831.1;Parent=gene-C9E94_RS02440;Dbxref=GenBank:WP_001109831.1;Name=WP_001109831.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461359.1;locus_tag=C9E94_RS02440;product=LysR family transcriptional regulator;protein_id=WP_001109831.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	5609	6607	.	+	.	ID=gene-C9E94_RS02445;Name=C9E94_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02445;old_locus_tag=C9E94_02515
NZ_PYJR01000027.1	Protein Homology	CDS	5609	6607	.	+	0	ID=cds-WP_080197151.1;Parent=gene-C9E94_RS02445;Dbxref=GenBank:WP_080197151.1;Name=WP_080197151.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461360.2;locus_tag=C9E94_RS02445;product=bile acid:sodium symporter family protein;protein_id=WP_080197151.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	6604	6822	.	-	.	ID=gene-C9E94_RS02450;Name=C9E94_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02450;old_locus_tag=C9E94_02520
NZ_PYJR01000027.1	Protein Homology	CDS	6604	6822	.	-	0	ID=cds-WP_001519708.1;Parent=gene-C9E94_RS02450;Dbxref=GenBank:WP_001519708.1;Name=WP_001519708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=C9E94_RS02450;product=DUF3820 family protein;protein_id=WP_001519708.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	6824	8839	.	-	.	ID=gene-C9E94_RS02455;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=C9E94_RS02455;old_locus_tag=C9E94_02525
NZ_PYJR01000027.1	Protein Homology	CDS	6824	8839	.	-	0	ID=cds-WP_000433273.1;Parent=gene-C9E94_RS02455;Dbxref=GenBank:WP_000433273.1;Name=WP_000433273.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461362.1;locus_tag=C9E94_RS02455;product=NAD-dependent DNA ligase LigA;protein_id=WP_000433273.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	8911	9897	.	-	.	ID=gene-C9E94_RS02460;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=C9E94_RS02460;old_locus_tag=C9E94_02530
NZ_PYJR01000027.1	Protein Homology	CDS	8911	9897	.	-	0	ID=cds-WP_000983126.1;Parent=gene-C9E94_RS02460;Dbxref=GenBank:WP_000983126.1;Name=WP_000983126.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461363.1;locus_tag=C9E94_RS02460;product=cell division protein ZipA;protein_id=WP_000983126.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	10129	10890	.	+	.	ID=gene-C9E94_RS02465;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=C9E94_RS02465;old_locus_tag=C9E94_02535
NZ_PYJR01000027.1	Protein Homology	CDS	10129	10890	.	+	0	ID=cds-WP_000255008.1;Parent=gene-C9E94_RS02465;Dbxref=GenBank:WP_000255008.1;Name=WP_000255008.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461364.1;locus_tag=C9E94_RS02465;product=sulfate transporter CysZ;protein_id=WP_000255008.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	11054	12025	.	+	.	ID=gene-C9E94_RS02470;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=C9E94_RS02470;old_locus_tag=C9E94_02540
NZ_PYJR01000027.1	Protein Homology	CDS	11054	12025	.	+	0	ID=cds-WP_000036904.1;Parent=gene-C9E94_RS02470;Dbxref=GenBank:WP_000036904.1;Name=WP_000036904.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=C9E94_RS02470;product=cysteine synthase A;protein_id=WP_000036904.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	12409	12666	.	+	.	ID=gene-C9E94_RS02475;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=C9E94_RS02475;old_locus_tag=C9E94_02545
NZ_PYJR01000027.1	Protein Homology	CDS	12409	12666	.	+	0	ID=cds-WP_000487600.1;Parent=gene-C9E94_RS02475;Dbxref=GenBank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=C9E94_RS02475;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	12715	14442	.	+	.	ID=gene-C9E94_RS02480;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=C9E94_RS02480;old_locus_tag=C9E94_02550
NZ_PYJR01000027.1	Protein Homology	CDS	12715	14442	.	+	0	ID=cds-WP_000623114.1;Parent=gene-C9E94_RS02480;Dbxref=GenBank:WP_000623114.1;Name=WP_000623114.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461367.1;locus_tag=C9E94_RS02480;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_000623114.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	14483	14992	.	+	.	ID=gene-C9E94_RS02485;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=C9E94_RS02485;old_locus_tag=C9E94_02555
NZ_PYJR01000027.1	Protein Homology	CDS	14483	14992	.	+	0	ID=cds-WP_000522253.1;Parent=gene-C9E94_RS02485;Dbxref=GenBank:WP_000522253.1;Name=WP_000522253.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=C9E94_RS02485;product=PTS glucose transporter subunit IIA;protein_id=WP_000522253.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	15155	15394	.	-	.	ID=gene-C9E94_RS02490;Name=C9E94_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02490;old_locus_tag=C9E94_02560
NZ_PYJR01000027.1	Protein Homology	CDS	15155	15394	.	-	0	ID=cds-WP_000844541.1;Parent=gene-C9E94_RS02490;Dbxref=GenBank:WP_000844541.1;Name=WP_000844541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461369.1;locus_tag=C9E94_RS02490;product=hypothetical protein;protein_id=WP_000844541.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	15391	16257	.	-	.	ID=gene-C9E94_RS02495;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=C9E94_RS02495;old_locus_tag=C9E94_02565
NZ_PYJR01000027.1	Protein Homology	CDS	15391	16257	.	-	0	ID=cds-WP_000529613.1;Parent=gene-C9E94_RS02495;Dbxref=GenBank:WP_000529613.1;Name=WP_000529613.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461370.1;locus_tag=C9E94_RS02495;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_000529613.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	16340	17632	.	+	.	ID=gene-C9E94_RS02500;Name=ptsJ;gbkey=Gene;gene=ptsJ;gene_biotype=protein_coding;locus_tag=C9E94_RS02500;old_locus_tag=C9E94_02570
NZ_PYJR01000027.1	Protein Homology	CDS	16340	17632	.	+	0	ID=cds-WP_000565119.1;Parent=gene-C9E94_RS02500;Dbxref=GenBank:WP_000565119.1;Name=WP_000565119.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptsJ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461371.1;locus_tag=C9E94_RS02500;product=MocR-like B6 salvage transcription factor PtsJ;protein_id=WP_000565119.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	17647	18366	.	+	.	ID=gene-C9E94_RS02505;Name=C9E94_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02505;old_locus_tag=C9E94_02575
NZ_PYJR01000027.1	Protein Homology	CDS	17647	18366	.	+	0	ID=cds-WP_001263761.1;Parent=gene-C9E94_RS02505;Dbxref=GenBank:WP_001263761.1;Name=WP_001263761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461372.1;locus_tag=C9E94_RS02505;product=type 1 glutamine amidotransferase;protein_id=WP_001263761.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	18425	18805	.	+	.	ID=gene-C9E94_RS02510;Name=C9E94_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02510;old_locus_tag=C9E94_02580
NZ_PYJR01000027.1	Protein Homology	CDS	18425	18805	.	+	0	ID=cds-WP_000710730.1;Parent=gene-C9E94_RS02510;Dbxref=GenBank:WP_000710730.1;Name=WP_000710730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461373.2;locus_tag=C9E94_RS02510;product=YfeK family protein;protein_id=WP_000710730.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	18818	19357	.	+	.	ID=gene-C9E94_RS02515;Name=C9E94_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02515;old_locus_tag=C9E94_02585
NZ_PYJR01000027.1	Protein Homology	CDS	18818	19357	.	+	0	ID=cds-WP_001119684.1;Parent=gene-C9E94_RS02515;Dbxref=GenBank:WP_001119684.1;Name=WP_001119684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461374.1;locus_tag=C9E94_RS02515;product=transglycosylase domain-containing protein;protein_id=WP_001119684.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	19488	20399	.	-	.	ID=gene-C9E94_RS02525;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=C9E94_RS02525;old_locus_tag=C9E94_02595
NZ_PYJR01000027.1	Protein Homology	CDS	19488	20399	.	-	0	ID=cds-WP_001093874.1;Parent=gene-C9E94_RS02525;Dbxref=GenBank:WP_001093874.1;Name=WP_001093874.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461375.1;locus_tag=C9E94_RS02525;product=cysteine synthase CysM;protein_id=WP_001093874.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	20467	21564	.	-	.	ID=gene-C9E94_RS02530;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=C9E94_RS02530;old_locus_tag=C9E94_02600
NZ_PYJR01000027.1	Protein Homology	CDS	20467	21564	.	-	0	ID=cds-WP_000021076.1;Parent=gene-C9E94_RS02530;Dbxref=GenBank:WP_000021076.1;Name=WP_000021076.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461376.1;locus_tag=C9E94_RS02530;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_000021076.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	21554	22429	.	-	.	ID=gene-C9E94_RS02535;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=C9E94_RS02535;old_locus_tag=C9E94_02605
NZ_PYJR01000027.1	Protein Homology	CDS	21554	22429	.	-	0	ID=cds-WP_000852705.1;Parent=gene-C9E94_RS02535;Dbxref=GenBank:WP_000852705.1;Name=WP_000852705.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461377.1;locus_tag=C9E94_RS02535;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_000852705.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	22429	23262	.	-	.	ID=gene-C9E94_RS02540;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=C9E94_RS02540;old_locus_tag=C9E94_02610
NZ_PYJR01000027.1	Protein Homology	CDS	22429	23262	.	-	0	ID=cds-WP_000881746.1;Parent=gene-C9E94_RS02540;Dbxref=GenBank:WP_000881746.1;Name=WP_000881746.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=C9E94_RS02540;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_000881746.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	23262	24278	.	-	.	ID=gene-C9E94_RS02545;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=C9E94_RS02545;old_locus_tag=C9E94_02615
NZ_PYJR01000027.1	Protein Homology	CDS	23262	24278	.	-	0	ID=cds-WP_135400792.1;Parent=gene-C9E94_RS02545;Dbxref=GenBank:WP_135400792.1;Name=WP_135400792.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461379.1;locus_tag=C9E94_RS02545;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_135400792.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	24436	25227	.	-	.	ID=gene-C9E94_RS02550;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=C9E94_RS02550;old_locus_tag=C9E94_02620
NZ_PYJR01000027.1	Protein Homology	CDS	24436	25227	.	-	0	ID=cds-WP_000517460.1;Parent=gene-C9E94_RS02550;Dbxref=GenBank:WP_000517460.1;Name=WP_000517460.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461380.1;locus_tag=C9E94_RS02550;product=SDR family oxidoreductase UcpA;protein_id=WP_000517460.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	25475	26374	.	-	.	ID=gene-C9E94_RS02555;Name=C9E94_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02555;old_locus_tag=C9E94_02625
NZ_PYJR01000027.1	Protein Homology	CDS	25475	26374	.	-	0	ID=cds-WP_135400793.1;Parent=gene-C9E94_RS02555;Dbxref=GenBank:WP_135400793.1;Name=WP_135400793.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461381.1;locus_tag=C9E94_RS02555;product=Dyp-type peroxidase;protein_id=WP_135400793.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	26469	27044	.	-	.	ID=gene-C9E94_RS02560;Name=C9E94_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02560;old_locus_tag=C9E94_02630
NZ_PYJR01000027.1	Protein Homology	CDS	26469	27044	.	-	0	ID=cds-WP_000838971.1;Parent=gene-C9E94_RS02560;Dbxref=GenBank:WP_000838971.1;Name=WP_000838971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461382.1;locus_tag=C9E94_RS02560;product=RpoE-regulated lipoprotein;protein_id=WP_000838971.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	27106	27555	.	-	.	ID=gene-C9E94_RS02565;Name=C9E94_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02565;old_locus_tag=C9E94_02635
NZ_PYJR01000027.1	Protein Homology	CDS	27106	27555	.	-	0	ID=cds-WP_135400794.1;Parent=gene-C9E94_RS02565;Dbxref=GenBank:WP_135400794.1;Name=WP_135400794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461383.1;locus_tag=C9E94_RS02565;product=DUF2919 domain-containing protein;protein_id=WP_135400794.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	27542	27967	.	-	.	ID=gene-C9E94_RS02570;Name=C9E94_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02570;old_locus_tag=C9E94_02640
NZ_PYJR01000027.1	Protein Homology	CDS	27542	27967	.	-	0	ID=cds-WP_000406008.1;Parent=gene-C9E94_RS02570;Dbxref=GenBank:WP_000406008.1;Name=WP_000406008.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=C9E94_RS02570;product=GNAT family acetyltransferase;protein_id=WP_000406008.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	28180	29049	.	+	.	ID=gene-C9E94_RS02575;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=C9E94_RS02575;old_locus_tag=C9E94_02645
NZ_PYJR01000027.1	Protein Homology	CDS	28180	29049	.	+	0	ID=cds-WP_000102880.1;Parent=gene-C9E94_RS02575;Dbxref=GenBank:WP_000102880.1;Name=WP_000102880.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461385.1;locus_tag=C9E94_RS02575;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_000102880.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	29052	29951	.	+	.	ID=gene-C9E94_RS02580;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=C9E94_RS02580;old_locus_tag=C9E94_02650
NZ_PYJR01000027.1	Protein Homology	CDS	29052	29951	.	+	0	ID=cds-WP_135400795.1;Parent=gene-C9E94_RS02580;Dbxref=GenBank:WP_135400795.1;Name=WP_135400795.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461386.1;locus_tag=C9E94_RS02580;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_135400795.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	29972	30301	.	+	.	ID=gene-C9E94_RS02585;Name=C9E94_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02585;old_locus_tag=C9E94_02655
NZ_PYJR01000027.1	Protein Homology	CDS	29972	30301	.	+	0	ID=cds-WP_001194343.1;Parent=gene-C9E94_RS02585;Dbxref=GenBank:WP_001194343.1;Name=WP_001194343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461387.1;locus_tag=C9E94_RS02585;product=hypothetical protein;protein_id=WP_001194343.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	30430	31707	.	+	.	ID=gene-C9E94_RS02590;Name=C9E94_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02590;old_locus_tag=C9E94_02660
NZ_PYJR01000027.1	Protein Homology	CDS	30430	31707	.	+	0	ID=cds-WP_000344435.1;Parent=gene-C9E94_RS02590;Dbxref=GenBank:WP_000344435.1;Name=WP_000344435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461388.1;locus_tag=C9E94_RS02590;product=DUF1963 domain-containing protein;protein_id=WP_000344435.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	31907	32959	.	-	.	ID=gene-C9E94_RS02600;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=C9E94_RS02600;old_locus_tag=C9E94_02670
NZ_PYJR01000027.1	Protein Homology	CDS	31907	32959	.	-	0	ID=cds-WP_000753665.1;Parent=gene-C9E94_RS02600;Dbxref=GenBank:WP_000753665.1;Name=WP_000753665.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461389.1;locus_tag=C9E94_RS02600;product=HTH-type transcriptional regulator EutR;protein_id=WP_000753665.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	33007	33501	.	-	.	ID=gene-C9E94_RS02605;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=C9E94_RS02605;old_locus_tag=C9E94_02675
NZ_PYJR01000027.1	Protein Homology	CDS	33007	33501	.	-	0	ID=cds-WP_000606266.1;Parent=gene-C9E94_RS02605;Dbxref=GenBank:WP_000606266.1;Name=WP_000606266.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461390.1;locus_tag=C9E94_RS02605;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_000606266.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	33514	34173	.	-	.	ID=gene-C9E94_RS02610;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=C9E94_RS02610;old_locus_tag=C9E94_02680
NZ_PYJR01000027.1	Protein Homology	CDS	33514	34173	.	-	0	ID=cds-WP_001111056.1;Parent=gene-C9E94_RS02610;Dbxref=GenBank:WP_001111056.1;Name=WP_001111056.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461391.1;locus_tag=C9E94_RS02610;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_001111056.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	34183	35079	.	-	.	ID=gene-C9E94_RS02615;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=C9E94_RS02615;old_locus_tag=C9E94_02685
NZ_PYJR01000027.1	Protein Homology	CDS	34183	35079	.	-	0	ID=cds-WP_000372354.1;Parent=gene-C9E94_RS02615;Dbxref=GenBank:WP_000372354.1;Name=WP_000372354.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461392.1;locus_tag=C9E94_RS02615;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_000372354.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	35098	36459	.	-	.	ID=gene-C9E94_RS02620;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=C9E94_RS02620;old_locus_tag=C9E94_02690
NZ_PYJR01000027.1	Protein Homology	CDS	35098	36459	.	-	0	ID=cds-WP_023206507.1;Parent=gene-C9E94_RS02620;Dbxref=GenBank:WP_023206507.1;Name=WP_023206507.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461393.1;locus_tag=C9E94_RS02620;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WP_023206507.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	36471	37874	.	-	.	ID=gene-C9E94_RS02625;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=C9E94_RS02625;old_locus_tag=C9E94_02695
NZ_PYJR01000027.1	Protein Homology	CDS	36471	37874	.	-	0	ID=cds-WP_135400796.1;Parent=gene-C9E94_RS02625;Dbxref=GenBank:WP_135400796.1;Name=WP_135400796.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461394.1;locus_tag=C9E94_RS02625;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_135400796.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	37871	39097	.	-	.	ID=gene-C9E94_RS02630;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=C9E94_RS02630;old_locus_tag=C9E94_02700
NZ_PYJR01000027.1	Protein Homology	CDS	37871	39097	.	-	0	ID=cds-WP_000512357.1;Parent=gene-C9E94_RS02630;Dbxref=GenBank:WP_000512357.1;Name=WP_000512357.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461395.1;locus_tag=C9E94_RS02630;product=ethanolamine utilization protein EutH;protein_id=WP_000512357.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	39217	40404	.	-	.	ID=gene-C9E94_RS02635;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=C9E94_RS02635;old_locus_tag=C9E94_02705
NZ_PYJR01000027.1	Protein Homology	CDS	39217	40404	.	-	0	ID=cds-WP_001147501.1;Parent=gene-C9E94_RS02635;Dbxref=GenBank:WP_001147501.1;Name=WP_001147501.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461396.1;locus_tag=C9E94_RS02635;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_001147501.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	40394	41233	.	-	.	ID=gene-C9E94_RS02640;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=C9E94_RS02640;old_locus_tag=C9E94_02710
NZ_PYJR01000027.1	Protein Homology	CDS	40394	41233	.	-	0	ID=cds-WP_023219835.1;Parent=gene-C9E94_RS02640;Dbxref=GenBank:WP_023219835.1;Name=WP_023219835.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461397.1;locus_tag=C9E94_RS02640;product=ethanolamine utilization protein EutJ;protein_id=WP_023219835.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	41244	42647	.	-	.	ID=gene-C9E94_RS02645;Name=C9E94_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02645;old_locus_tag=C9E94_02715
NZ_PYJR01000027.1	Protein Homology	CDS	41244	42647	.	-	0	ID=cds-WP_001075640.1;Parent=gene-C9E94_RS02645;Dbxref=GenBank:WP_001075640.1;Name=WP_001075640.1;Ontology_term=GO:0004029,GO:0008774;gbkey=CDS;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA,acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=C9E94_RS02645;product=aldehyde dehydrogenase family protein;protein_id=WP_001075640.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	42659	42946	.	-	.	ID=gene-C9E94_RS02650;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=C9E94_RS02650;old_locus_tag=C9E94_02720
NZ_PYJR01000027.1	Protein Homology	CDS	42659	42946	.	-	0	ID=cds-WP_001522340.1;Parent=gene-C9E94_RS02650;Dbxref=GenBank:WP_001522340.1;Name=WP_001522340.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=C9E94_RS02650;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_001522340.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	43059	43349	.	-	.	ID=gene-C9E94_RS02655;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=C9E94_RS02655;old_locus_tag=C9E94_02725
NZ_PYJR01000027.1	Protein Homology	CDS	43059	43349	.	-	0	ID=cds-WP_000387716.1;Parent=gene-C9E94_RS02655;Dbxref=GenBank:WP_000387716.1;Name=WP_000387716.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461400.1;locus_tag=C9E94_RS02655;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387716.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	43390	44406	.	-	.	ID=gene-C9E94_RS02660;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=C9E94_RS02660;old_locus_tag=C9E94_02730
NZ_PYJR01000027.1	Protein Homology	CDS	43390	44406	.	-	0	ID=cds-WP_135400797.1;Parent=gene-C9E94_RS02660;Dbxref=GenBank:WP_135400797.1;Name=WP_135400797.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461401.1;locus_tag=C9E94_RS02660;product=phosphate acetyltransferase;protein_id=WP_135400797.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	44403	45206	.	-	.	ID=gene-C9E94_RS02665;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=C9E94_RS02665;old_locus_tag=C9E94_02735
NZ_PYJR01000027.1	Protein Homology	CDS	44403	45206	.	-	0	ID=cds-WP_000997649.1;Parent=gene-C9E94_RS02665;Dbxref=GenBank:WP_000997649.1;Name=WP_000997649.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461402.1;locus_tag=C9E94_RS02665;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_000997649.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	45203	45892	.	-	.	ID=gene-C9E94_RS02670;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=C9E94_RS02670;old_locus_tag=C9E94_02740
NZ_PYJR01000027.1	Protein Homology	CDS	45203	45892	.	-	0	ID=cds-WP_000733867.1;Parent=gene-C9E94_RS02670;Dbxref=GenBank:WP_000733867.1;Name=WP_000733867.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461403.1;locus_tag=C9E94_RS02670;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_000733867.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	45870	46349	.	-	.	ID=gene-C9E94_RS02675;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=C9E94_RS02675;old_locus_tag=C9E94_02745
NZ_PYJR01000027.1	Protein Homology	CDS	45870	46349	.	-	0	ID=cds-WP_000820751.1;Parent=gene-C9E94_RS02675;Dbxref=GenBank:WP_000820751.1;Name=WP_000820751.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461404.1;locus_tag=C9E94_RS02675;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_000820751.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	46362	46697	.	-	.	ID=gene-C9E94_RS02680;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=C9E94_RS02680;old_locus_tag=C9E94_02750
NZ_PYJR01000027.1	Protein Homology	CDS	46362	46697	.	-	0	ID=cds-WP_001031445.1;Parent=gene-C9E94_RS02680;Dbxref=GenBank:WP_001031445.1;Name=WP_001031445.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461405.1;locus_tag=C9E94_RS02680;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_001031445.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	47115	49394	.	-	.	ID=gene-C9E94_RS02685;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=C9E94_RS02685;old_locus_tag=C9E94_02755
NZ_PYJR01000027.1	Protein Homology	CDS	47115	49394	.	-	0	ID=cds-WP_000344299.1;Parent=gene-C9E94_RS02685;Dbxref=GenBank:WP_000344299.1;Name=WP_000344299.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461407.1;locus_tag=C9E94_RS02685;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_000344299.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	49666	50616	.	+	.	ID=gene-C9E94_RS02690;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=C9E94_RS02690;old_locus_tag=C9E94_02765
NZ_PYJR01000027.1	Protein Homology	CDS	49666	50616	.	+	0	ID=cds-WP_001072443.1;Parent=gene-C9E94_RS02690;Dbxref=GenBank:WP_001072443.1;Name=WP_001072443.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461408.1;locus_tag=C9E94_RS02690;product=transaldolase;protein_id=WP_001072443.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	50636	52636	.	+	.	ID=gene-C9E94_RS02695;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=C9E94_RS02695;old_locus_tag=C9E94_02770
NZ_PYJR01000027.1	Protein Homology	CDS	50636	52636	.	+	0	ID=cds-WP_000087328.1;Parent=gene-C9E94_RS02695;Dbxref=GenBank:WP_000087328.1;Name=WP_000087328.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=C9E94_RS02695;product=transketolase;protein_id=WP_000087328.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	52699	52929	.	-	.	ID=gene-C9E94_RS02700;Name=C9E94_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02700;old_locus_tag=C9E94_02775
NZ_PYJR01000027.1	Protein Homology	CDS	52699	52929	.	-	0	ID=cds-WP_000700635.1;Parent=gene-C9E94_RS02700;Dbxref=GenBank:WP_000700635.1;Name=WP_000700635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461410.1;locus_tag=C9E94_RS02700;product=hypothetical protein;protein_id=WP_000700635.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	53058	54101	.	-	.	ID=gene-C9E94_RS02705;Name=C9E94_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02705;old_locus_tag=C9E94_02780
NZ_PYJR01000027.1	Protein Homology	CDS	53058	54101	.	-	0	ID=cds-WP_001270668.1;Parent=gene-C9E94_RS02705;Dbxref=GenBank:WP_001270668.1;Name=WP_001270668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461411.1;locus_tag=C9E94_RS02705;product=DUF1176 domain-containing protein;protein_id=WP_001270668.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	54226	54801	.	-	.	ID=gene-C9E94_RS02710;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=C9E94_RS02710;old_locus_tag=C9E94_02785
NZ_PYJR01000027.1	Protein Homology	CDS	54226	54801	.	-	0	ID=cds-WP_000084033.1;Parent=gene-C9E94_RS02710;Dbxref=GenBank:WP_000084033.1;Name=WP_000084033.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461412.1;locus_tag=C9E94_RS02710;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_000084033.1;transl_table=11
NZ_PYJR01000027.1	RefSeq	gene	55005	56303	.	+	.	ID=gene-C9E94_RS02715;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=C9E94_RS02715;old_locus_tag=C9E94_02790
NZ_PYJR01000027.1	Protein Homology	CDS	55005	56303	.	+	0	ID=cds-WP_000673293.1;Parent=gene-C9E94_RS02715;Dbxref=GenBank:WP_000673293.1;Name=WP_000673293.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461413.1;locus_tag=C9E94_RS02715;product=penicillin binding protein PBP4B;protein_id=WP_000673293.1;transl_table=11
##sequence-region NZ_PYJR01000140.1 1 53938
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000140.1	RefSeq	region	1	53938	.	+	.	ID=NZ_PYJR01000140.1:1..53938;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000140.1	RefSeq	gene	103	179	.	+	.	ID=gene-C9E94_RS22675;Name=C9E94_RS22675;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS22675;old_locus_tag=C9E94_23270
NZ_PYJR01000140.1	tRNAscan-SE	tRNA	103	179	.	+	.	ID=rna-C9E94_RS22675;Parent=gene-C9E94_RS22675;anticodon=(pos:137..139);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS22675;product=tRNA-Asp
NZ_PYJR01000140.1	tRNAscan-SE	exon	103	179	.	+	.	ID=exon-C9E94_RS22675-1;Parent=rna-C9E94_RS22675;anticodon=(pos:137..139);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS22675;product=tRNA-Asp
NZ_PYJR01000140.1	RefSeq	gene	188	263	.	+	.	ID=gene-C9E94_RS22680;Name=C9E94_RS22680;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS22680;old_locus_tag=C9E94_23275
NZ_PYJR01000140.1	tRNAscan-SE	tRNA	188	263	.	+	.	ID=rna-C9E94_RS22680;Parent=gene-C9E94_RS22680;anticodon=(pos:221..223);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS22680;product=tRNA-Trp
NZ_PYJR01000140.1	tRNAscan-SE	exon	188	263	.	+	.	ID=exon-C9E94_RS22680-1;Parent=rna-C9E94_RS22680;anticodon=(pos:221..223);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS22680;product=tRNA-Trp
NZ_PYJR01000140.1	RefSeq	gene	365	1213	.	-	.	ID=gene-C9E94_RS22685;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=C9E94_RS22685;old_locus_tag=C9E94_23280
NZ_PYJR01000140.1	Protein Homology	CDS	365	1213	.	-	0	ID=cds-WP_001541181.1;Parent=gene-C9E94_RS22685;Dbxref=GenBank:WP_001541181.1;Name=WP_001541181.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462788.3;locus_tag=C9E94_RS22685;product=HTH-type transcriptional regulator HdfR;protein_id=WP_001541181.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	1320	1658	.	+	.	ID=gene-C9E94_RS22690;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=C9E94_RS22690;old_locus_tag=C9E94_23285
NZ_PYJR01000140.1	Protein Homology	CDS	1320	1658	.	+	0	ID=cds-WP_000840996.1;Parent=gene-C9E94_RS22690;Dbxref=GenBank:WP_000840996.1;Name=WP_000840996.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462789.1;locus_tag=C9E94_RS22690;product=macrodomain Ori organization protein MaoP;protein_id=WP_000840996.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	1683	3203	.	-	.	ID=gene-C9E94_RS22695;Name=C9E94_RS22695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22695;old_locus_tag=C9E94_23290
NZ_PYJR01000140.1	Protein Homology	CDS	1683	3203	.	-	0	ID=cds-WP_061378855.1;Parent=gene-C9E94_RS22695;Dbxref=GenBank:WP_061378855.1;Name=WP_061378855.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=C9E94_RS22695;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_061378855.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	3555	3653	.	+	.	ID=gene-C9E94_RS22705;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=C9E94_RS22705;old_locus_tag=C9E94_23295
NZ_PYJR01000140.1	Protein Homology	CDS	3555	3653	.	+	0	ID=cds-WP_001311244.1;Parent=gene-C9E94_RS22705;Dbxref=GenBank:WP_001311244.1;Name=WP_001311244.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=C9E94_RS22705;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	3740	3790	.	+	.	ID=gene-C9E94_RS23525;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=C9E94_RS23525
NZ_PYJR01000140.1	Protein Homology	CDS	3740	3790	.	+	0	ID=cds-WP_192930503.1;Parent=gene-C9E94_RS23525;Dbxref=GenBank:WP_192930503.1;Name=WP_192930503.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: protein motif:HMM:NF038286.1;locus_tag=C9E94_RS23525;product=peptide IlvX;protein_id=WP_192930503.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	3793	5439	.	+	.	ID=gene-C9E94_RS22710;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=C9E94_RS22710;old_locus_tag=C9E94_23300
NZ_PYJR01000140.1	Protein Homology	CDS	3793	5439	.	+	0	ID=cds-WP_020437556.1;Parent=gene-C9E94_RS22710;Dbxref=GenBank:WP_020437556.1;Name=WP_020437556.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=C9E94_RS22710;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_020437556.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	5436	5699	.	+	.	ID=gene-C9E94_RS22715;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=C9E94_RS22715;old_locus_tag=C9E94_23305
NZ_PYJR01000140.1	Protein Homology	CDS	5436	5699	.	+	0	ID=cds-WP_020437557.1;Parent=gene-C9E94_RS22715;Dbxref=GenBank:WP_020437557.1;Name=WP_020437557.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=C9E94_RS22715;product=acetolactate synthase 2 small subunit;protein_id=WP_020437557.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	5717	6646	.	+	.	ID=gene-C9E94_RS22720;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=C9E94_RS22720;old_locus_tag=C9E94_23310
NZ_PYJR01000140.1	Protein Homology	CDS	5717	6646	.	+	0	ID=cds-WP_000208532.1;Parent=gene-C9E94_RS22720;Dbxref=GenBank:WP_000208532.1;Name=WP_000208532.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462794.1;locus_tag=C9E94_RS22720;product=branched-chain-amino-acid transaminase;protein_id=WP_000208532.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	6806	8656	.	+	.	ID=gene-C9E94_RS22725;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=C9E94_RS22725;old_locus_tag=C9E94_23315
NZ_PYJR01000140.1	Protein Homology	CDS	6806	8656	.	+	0	ID=cds-WP_061378854.1;Parent=gene-C9E94_RS22725;Dbxref=GenBank:WP_061378854.1;Name=WP_061378854.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=C9E94_RS22725;product=dihydroxy-acid dehydratase;protein_id=WP_061378854.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	8659	10203	.	+	.	ID=gene-C9E94_RS22730;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=C9E94_RS22730;old_locus_tag=C9E94_23320
NZ_PYJR01000140.1	Protein Homology	CDS	8659	10203	.	+	0	ID=cds-WP_023232432.1;Parent=gene-C9E94_RS22730;Dbxref=GenBank:WP_023232432.1;Name=WP_023232432.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462796.1;locus_tag=C9E94_RS22730;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_023232432.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	10486	10803	.	+	.	ID=gene-C9E94_RS22735;Name=C9E94_RS22735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22735;old_locus_tag=C9E94_23325
NZ_PYJR01000140.1	Protein Homology	CDS	10486	10803	.	+	0	ID=cds-WP_000535852.1;Parent=gene-C9E94_RS22735;Dbxref=GenBank:WP_000535852.1;Name=WP_000535852.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462797.1;locus_tag=C9E94_RS22735;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_000535852.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	10800	11141	.	+	.	ID=gene-C9E94_RS22740;Name=C9E94_RS22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22740;old_locus_tag=C9E94_23330
NZ_PYJR01000140.1	Protein Homology	CDS	10800	11141	.	+	0	ID=cds-WP_000560824.1;Parent=gene-C9E94_RS22740;Dbxref=GenBank:WP_000560824.1;Name=WP_000560824.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462798.1;locus_tag=C9E94_RS22740;product=helix-turn-helix domain-containing protein;protein_id=WP_000560824.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	11144	12031	.	-	.	ID=gene-C9E94_RS22745;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=C9E94_RS22745;old_locus_tag=C9E94_23335
NZ_PYJR01000140.1	Protein Homology	CDS	11144	12031	.	-	0	ID=cds-WP_000365798.1;Parent=gene-C9E94_RS22745;Dbxref=GenBank:WP_000365798.1;Name=WP_000365798.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462799.1;locus_tag=C9E94_RS22745;product=HTH-type transcriptional activator IlvY;protein_id=WP_000365798.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	12196	13671	.	+	.	ID=gene-C9E94_RS22750;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=C9E94_RS22750;old_locus_tag=C9E94_23340
NZ_PYJR01000140.1	Protein Homology	CDS	12196	13671	.	+	0	ID=cds-WP_000024934.1;Parent=gene-C9E94_RS22750;Dbxref=GenBank:WP_000024934.1;Name=WP_000024934.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=C9E94_RS22750;product=ketol-acid reductoisomerase;protein_id=WP_000024934.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	13763	14044	.	-	.	ID=gene-C9E94_RS22755;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=C9E94_RS22755;old_locus_tag=C9E94_23345
NZ_PYJR01000140.1	Protein Homology	CDS	13763	14044	.	-	0	ID=cds-WP_001096806.1;Parent=gene-C9E94_RS22755;Dbxref=GenBank:WP_001096806.1;Name=WP_001096806.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462801.1;locus_tag=C9E94_RS22755;product=peptidylprolyl isomerase PpiC;protein_id=WP_001096806.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	pseudogene	14238	14393	.	+	.	ID=gene-C9E94_RS23830;Name=C9E94_RS23830;end_range=14393,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23830;partial=true;pseudo=true
NZ_PYJR01000140.1	Protein Homology	CDS	14238	14393	.	+	0	ID=cds-C9E94_RS23830;Parent=gene-C9E94_RS23830;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=14393,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442089.1;locus_tag=C9E94_RS23830;partial=true;product=Crp/Fnr family transcriptional regulator;pseudo=true;transl_table=11
NZ_PYJR01000140.1	RefSeq	pseudogene	14345	14482	.	+	.	ID=gene-C9E94_RS22765;Name=C9E94_RS22765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS22765;old_locus_tag=C9E94_23355;partial=true;pseudo=true;start_range=.,14345
NZ_PYJR01000140.1	Protein Homology	CDS	14345	14482	.	+	0	ID=cds-C9E94_RS22765;Parent=gene-C9E94_RS22765;Note=involved in nicotinamide riboside transport%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506088.1;locus_tag=C9E94_RS22765;partial=true;product=nicotinamide riboside transporter PnuC;pseudo=true;start_range=.,14345;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	14582	16606	.	+	.	ID=gene-C9E94_RS22770;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=C9E94_RS22770;old_locus_tag=C9E94_23360
NZ_PYJR01000140.1	Protein Homology	CDS	14582	16606	.	+	0	ID=cds-WP_001238842.1;Parent=gene-C9E94_RS22770;Dbxref=GenBank:WP_001238842.1;Name=WP_001238842.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462803.1;locus_tag=C9E94_RS22770;product=DNA helicase Rep;protein_id=WP_001238842.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	16646	18127	.	-	.	ID=gene-C9E94_RS22775;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=C9E94_RS22775;old_locus_tag=C9E94_23365
NZ_PYJR01000140.1	Protein Homology	CDS	16646	18127	.	-	0	ID=cds-WP_001089447.1;Parent=gene-C9E94_RS22775;Dbxref=GenBank:WP_001089447.1;Name=WP_001089447.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462804.1;locus_tag=C9E94_RS22775;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_001089447.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	18264	19529	.	-	.	ID=gene-C9E94_RS22780;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=C9E94_RS22780;old_locus_tag=C9E94_23375
NZ_PYJR01000140.1	Protein Homology	CDS	18264	19529	.	-	0	ID=cds-WP_000047525.1;Parent=gene-C9E94_RS22780;Dbxref=GenBank:WP_000047525.1;Name=WP_000047525.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462805.1;locus_tag=C9E94_RS22780;product=ATP-dependent RNA helicase RhlB;protein_id=WP_000047525.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	19673	20002	.	+	.	ID=gene-C9E94_RS22785;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=C9E94_RS22785;old_locus_tag=C9E94_23380
NZ_PYJR01000140.1	Protein Homology	CDS	19673	20002	.	+	0	ID=cds-WP_001280776.1;Parent=gene-C9E94_RS22785;Dbxref=GenBank:WP_001280776.1;Name=WP_001280776.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=C9E94_RS22785;product=thioredoxin TrxA;protein_id=WP_001280776.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	20250	20333	.	+	.	ID=gene-C9E94_RS23725;Name=C9E94_RS23725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23725
NZ_PYJR01000140.1	Protein Homology	CDS	20250	20333	.	+	0	ID=cds-WP_134820045.1;Parent=gene-C9E94_RS23725;Dbxref=GenBank:WP_134820045.1;Name=WP_134820045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=C9E94_RS23725;product=rho operon leader peptide;protein_id=WP_134820045.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	20421	21680	.	+	.	ID=gene-C9E94_RS22795;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=C9E94_RS22795;old_locus_tag=C9E94_23390
NZ_PYJR01000140.1	Protein Homology	CDS	20421	21680	.	+	0	ID=cds-WP_001054532.1;Parent=gene-C9E94_RS22795;Dbxref=GenBank:WP_001054532.1;Name=WP_001054532.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=C9E94_RS22795;product=transcription termination factor Rho;protein_id=WP_001054532.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	21920	23023	.	+	.	ID=gene-C9E94_RS22805;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=C9E94_RS22805;old_locus_tag=C9E94_23400
NZ_PYJR01000140.1	Protein Homology	CDS	21920	23023	.	+	0	ID=cds-WP_001050948.1;Parent=gene-C9E94_RS22805;Dbxref=GenBank:WP_001050948.1;Name=WP_001050948.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418231.1;locus_tag=C9E94_RS22805;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_001050948.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	23035	24081	.	+	.	ID=gene-C9E94_RS22810;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=C9E94_RS22810;old_locus_tag=C9E94_23405
NZ_PYJR01000140.1	Protein Homology	CDS	23035	24081	.	+	0	ID=cds-WP_000193417.1;Parent=gene-C9E94_RS22810;Dbxref=GenBank:WP_000193417.1;Name=WP_000193417.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462809.1;locus_tag=C9E94_RS22810;product=ECA polysaccharide chain length modulation protein;protein_id=WP_000193417.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	24137	25267	.	+	.	ID=gene-C9E94_RS22815;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=C9E94_RS22815;old_locus_tag=C9E94_23410
NZ_PYJR01000140.1	Protein Homology	CDS	24137	25267	.	+	0	ID=cds-WP_000866676.1;Parent=gene-C9E94_RS22815;Dbxref=GenBank:WP_000866676.1;Name=WP_000866676.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462810.1;locus_tag=C9E94_RS22815;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_000866676.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	25264	26526	.	+	.	ID=gene-C9E94_RS22820;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=C9E94_RS22820;old_locus_tag=C9E94_23415
NZ_PYJR01000140.1	Protein Homology	CDS	25264	26526	.	+	0	ID=cds-WP_000011226.1;Parent=gene-C9E94_RS22820;Dbxref=GenBank:WP_000011226.1;Name=WP_000011226.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462811.1;locus_tag=C9E94_RS22820;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_000011226.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	26526	27593	.	+	.	ID=gene-C9E94_RS22825;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=C9E94_RS22825;old_locus_tag=C9E94_23420
NZ_PYJR01000140.1	Protein Homology	CDS	26526	27593	.	+	0	ID=cds-WP_000822147.1;Parent=gene-C9E94_RS22825;Dbxref=GenBank:WP_000822147.1;Name=WP_000822147.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462812.1;locus_tag=C9E94_RS22825;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_000822147.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	27626	28507	.	+	.	ID=gene-C9E94_RS22830;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=C9E94_RS22830;old_locus_tag=C9E94_23425
NZ_PYJR01000140.1	Protein Homology	CDS	27626	28507	.	+	0	ID=cds-WP_000676077.1;Parent=gene-C9E94_RS22830;Dbxref=GenBank:WP_000676077.1;Name=WP_000676077.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=C9E94_RS22830;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_000676077.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	28485	29162	.	+	.	ID=gene-C9E94_RS22835;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=C9E94_RS22835;old_locus_tag=C9E94_23430
NZ_PYJR01000140.1	Protein Homology	CDS	28485	29162	.	+	0	ID=cds-WP_001145157.1;Parent=gene-C9E94_RS22835;Dbxref=GenBank:WP_001145157.1;Name=WP_001145157.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=C9E94_RS22835;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_001145157.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	29167	30297	.	+	.	ID=gene-C9E94_RS22840;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=C9E94_RS22840;old_locus_tag=C9E94_23435
NZ_PYJR01000140.1	Protein Homology	CDS	29167	30297	.	+	0	ID=cds-WP_000612080.1;Parent=gene-C9E94_RS22840;Dbxref=GenBank:WP_000612080.1;Name=WP_000612080.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462815.1;locus_tag=C9E94_RS22840;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_000612080.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	30299	31549	.	+	.	ID=gene-C9E94_RS22845;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=C9E94_RS22845;old_locus_tag=C9E94_23440
NZ_PYJR01000140.1	Protein Homology	CDS	30299	31549	.	+	0	ID=cds-WP_000050295.1;Parent=gene-C9E94_RS22845;Dbxref=GenBank:WP_000050295.1;Name=WP_000050295.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462816.1;locus_tag=C9E94_RS22845;product=lipid III flippase WzxE;protein_id=WP_000050295.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	31546	32625	.	+	.	ID=gene-C9E94_RS22850;Name=C9E94_RS22850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22850;old_locus_tag=C9E94_23445
NZ_PYJR01000140.1	Protein Homology	CDS	31546	32625	.	+	0	ID=cds-WP_000217173.1;Parent=gene-C9E94_RS22850;Dbxref=GenBank:WP_000217173.1;Name=WP_000217173.1;Ontology_term=GO:0036065,GO:0008417;gbkey=CDS;go_function=fucosyltransferase activity|0008417||IEA;go_process=fucosylation|0036065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462817.1;locus_tag=C9E94_RS22850;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_000217173.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	32622	33980	.	+	.	ID=gene-C9E94_RS22855;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=C9E94_RS22855;old_locus_tag=C9E94_23450
NZ_PYJR01000140.1	Protein Homology	CDS	32622	33980	.	+	0	ID=cds-WP_000055605.1;Parent=gene-C9E94_RS22855;Dbxref=GenBank:WP_000055605.1;Name=WP_000055605.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462818.1;locus_tag=C9E94_RS22855;product=ECA oligosaccharide polymerase;protein_id=WP_000055605.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	33977	34717	.	+	.	ID=gene-C9E94_RS22860;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=C9E94_RS22860;old_locus_tag=C9E94_23455
NZ_PYJR01000140.1	Protein Homology	CDS	33977	34717	.	+	0	ID=cds-WP_000183617.1;Parent=gene-C9E94_RS22860;Dbxref=GenBank:WP_000183617.1;Name=WP_000183617.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462819.1;locus_tag=C9E94_RS22860;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_000183617.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	34924	36309	.	+	.	ID=gene-C9E94_RS22865;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=C9E94_RS22865;old_locus_tag=C9E94_23460
NZ_PYJR01000140.1	Protein Homology	CDS	34924	36309	.	+	0	ID=cds-WP_000818378.1;Parent=gene-C9E94_RS22865;Dbxref=GenBank:WP_000818378.1;Name=WP_000818378.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462820.1;locus_tag=C9E94_RS22865;product=bifunctional threonine/serine APC transporter ThrP;protein_id=WP_000818378.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	36412	36488	.	+	.	ID=gene-C9E94_RS22870;Name=C9E94_RS22870;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS22870;old_locus_tag=C9E94_23465
NZ_PYJR01000140.1	tRNAscan-SE	tRNA	36412	36488	.	+	.	ID=rna-C9E94_RS22870;Parent=gene-C9E94_RS22870;anticodon=(pos:36446..36448);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS22870;product=tRNA-Arg
NZ_PYJR01000140.1	tRNAscan-SE	exon	36412	36488	.	+	.	ID=exon-C9E94_RS22870-1;Parent=rna-C9E94_RS22870;anticodon=(pos:36446..36448);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS22870;product=tRNA-Arg
NZ_PYJR01000140.1	RefSeq	gene	36543	36618	.	+	.	ID=gene-C9E94_RS22875;Name=C9E94_RS22875;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS22875;old_locus_tag=C9E94_23470
NZ_PYJR01000140.1	tRNAscan-SE	tRNA	36543	36618	.	+	.	ID=rna-C9E94_RS22875;Parent=gene-C9E94_RS22875;anticodon=(pos:36576..36578);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS22875;product=tRNA-His
NZ_PYJR01000140.1	tRNAscan-SE	exon	36543	36618	.	+	.	ID=exon-C9E94_RS22875-1;Parent=rna-C9E94_RS22875;anticodon=(pos:36576..36578);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS22875;product=tRNA-His
NZ_PYJR01000140.1	RefSeq	gene	36639	36725	.	+	.	ID=gene-C9E94_RS22880;Name=C9E94_RS22880;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS22880;old_locus_tag=C9E94_23475
NZ_PYJR01000140.1	tRNAscan-SE	tRNA	36639	36725	.	+	.	ID=rna-C9E94_RS22880;Parent=gene-C9E94_RS22880;anticodon=(pos:36673..36675);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS22880;product=tRNA-Leu
NZ_PYJR01000140.1	tRNAscan-SE	exon	36639	36725	.	+	.	ID=exon-C9E94_RS22880-1;Parent=rna-C9E94_RS22880;anticodon=(pos:36673..36675);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS22880;product=tRNA-Leu
NZ_PYJR01000140.1	RefSeq	gene	36768	36844	.	+	.	ID=gene-C9E94_RS22885;Name=C9E94_RS22885;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS22885;old_locus_tag=C9E94_23480
NZ_PYJR01000140.1	tRNAscan-SE	tRNA	36768	36844	.	+	.	ID=rna-C9E94_RS22885;Parent=gene-C9E94_RS22885;anticodon=(pos:36802..36804);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS22885;product=tRNA-Pro
NZ_PYJR01000140.1	tRNAscan-SE	exon	36768	36844	.	+	.	ID=exon-C9E94_RS22885-1;Parent=rna-C9E94_RS22885;anticodon=(pos:36802..36804);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS22885;product=tRNA-Pro
NZ_PYJR01000140.1	RefSeq	gene	37426	38622	.	-	.	ID=gene-C9E94_RS22890;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=C9E94_RS22890;old_locus_tag=C9E94_23485
NZ_PYJR01000140.1	Protein Homology	CDS	37426	38622	.	-	0	ID=cds-WP_001546072.1;Parent=gene-C9E94_RS22890;Dbxref=GenBank:WP_001546072.1;Name=WP_001546072.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=C9E94_RS22890;product=protoheme IX biogenesis protein HemY;protein_id=WP_001546072.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	38625	39794	.	-	.	ID=gene-C9E94_RS22895;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=C9E94_RS22895;old_locus_tag=C9E94_23490
NZ_PYJR01000140.1	Protein Homology	CDS	38625	39794	.	-	0	ID=cds-WP_000138962.1;Parent=gene-C9E94_RS22895;Dbxref=GenBank:WP_000138962.1;Name=WP_000138962.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462822.1;locus_tag=C9E94_RS22895;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_000138962.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	39816	40556	.	-	.	ID=gene-C9E94_RS22900;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=C9E94_RS22900;old_locus_tag=C9E94_23495
NZ_PYJR01000140.1	Protein Homology	CDS	39816	40556	.	-	0	ID=cds-WP_023242915.1;Parent=gene-C9E94_RS22900;Dbxref=GenBank:WP_023242915.1;Name=WP_023242915.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462823.1;locus_tag=C9E94_RS22900;product=uroporphyrinogen-III synthase;protein_id=WP_023242915.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	40553	41494	.	-	.	ID=gene-C9E94_RS22905;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=C9E94_RS22905;old_locus_tag=C9E94_23500
NZ_PYJR01000140.1	Protein Homology	CDS	40553	41494	.	-	0	ID=cds-WP_001521319.1;Parent=gene-C9E94_RS22905;Dbxref=GenBank:WP_001521319.1;Name=WP_001521319.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=C9E94_RS22905;product=hydroxymethylbilane synthase;protein_id=WP_001521319.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	41871	44417	.	+	.	ID=gene-C9E94_RS22910;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=C9E94_RS22910;old_locus_tag=C9E94_23505
NZ_PYJR01000140.1	Protein Homology	CDS	41871	44417	.	+	0	ID=cds-WP_000281718.1;Parent=gene-C9E94_RS22910;Dbxref=GenBank:WP_000281718.1;Name=WP_000281718.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462825.1;locus_tag=C9E94_RS22910;product=class I adenylate cyclase;protein_id=WP_000281718.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	44495	44815	.	-	.	ID=gene-C9E94_RS22915;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=C9E94_RS22915;old_locus_tag=C9E94_23510
NZ_PYJR01000140.1	Protein Homology	CDS	44495	44815	.	-	0	ID=cds-WP_000999927.1;Parent=gene-C9E94_RS22915;Dbxref=GenBank:WP_000999927.1;Name=WP_000999927.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=C9E94_RS22915;product=iron donor protein CyaY;protein_id=WP_000999927.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	44885	45274	.	-	.	ID=gene-C9E94_RS22920;Name=C9E94_RS22920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22920;old_locus_tag=C9E94_23515
NZ_PYJR01000140.1	Protein Homology	CDS	44885	45274	.	-	0	ID=cds-WP_001125568.1;Parent=gene-C9E94_RS22920;Dbxref=GenBank:WP_001125568.1;Name=WP_001125568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462830.1;locus_tag=C9E94_RS22920;product=DUF3021 family protein;protein_id=WP_001125568.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	pseudogene	45262	45564	.	-	.	ID=gene-C9E94_RS22925;Name=C9E94_RS22925;end_range=45564,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS22925;old_locus_tag=C9E94_23520;partial=true;pseudo=true
NZ_PYJR01000140.1	Protein Homology	CDS	45262	45564	.	-	0	ID=cds-C9E94_RS22925;Parent=gene-C9E94_RS22925;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=45564,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200019.1;locus_tag=C9E94_RS22925;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	45534	45785	.	-	.	ID=gene-C9E94_RS23400;Name=C9E94_RS23400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23400;old_locus_tag=C9E94_23525
NZ_PYJR01000140.1	GeneMarkS-2+	CDS	45534	45785	.	-	0	ID=cds-WP_001621231.1;Parent=gene-C9E94_RS23400;Dbxref=GenBank:WP_001621231.1;Name=WP_001621231.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS23400;product=hypothetical protein;protein_id=WP_001621231.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	45971	46174	.	+	.	ID=gene-C9E94_RS22930;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=C9E94_RS22930;old_locus_tag=C9E94_23530
NZ_PYJR01000140.1	Protein Homology	CDS	45971	46174	.	+	0	ID=cds-WP_000799903.1;Parent=gene-C9E94_RS22930;Dbxref=GenBank:WP_000799903.1;Name=WP_000799903.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462831.1;locus_tag=C9E94_RS22930;product=LPS translocon maturation chaperone LptM;protein_id=WP_000799903.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	46211	47035	.	+	.	ID=gene-C9E94_RS22935;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=C9E94_RS22935;old_locus_tag=C9E94_23535
NZ_PYJR01000140.1	Protein Homology	CDS	46211	47035	.	+	0	ID=cds-WP_001160671.1;Parent=gene-C9E94_RS22935;Dbxref=GenBank:WP_001160671.1;Name=WP_001160671.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=C9E94_RS22935;product=diaminopimelate epimerase;protein_id=WP_001160671.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	47032	47739	.	+	.	ID=gene-C9E94_RS22940;Name=C9E94_RS22940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22940;old_locus_tag=C9E94_23540
NZ_PYJR01000140.1	Protein Homology	CDS	47032	47739	.	+	0	ID=cds-WP_000812763.1;Parent=gene-C9E94_RS22940;Dbxref=GenBank:WP_000812763.1;Name=WP_000812763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462833.1;locus_tag=C9E94_RS22940;product=DUF484 domain-containing protein;protein_id=WP_000812763.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	47736	48638	.	+	.	ID=gene-C9E94_RS22945;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=C9E94_RS22945;old_locus_tag=C9E94_23545
NZ_PYJR01000140.1	Protein Homology	CDS	47736	48638	.	+	0	ID=cds-WP_000132874.1;Parent=gene-C9E94_RS22945;Dbxref=GenBank:WP_000132874.1;Name=WP_000132874.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462834.1;locus_tag=C9E94_RS22945;product=tyrosine recombinase XerC;protein_id=WP_000132874.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	48638	49354	.	+	.	ID=gene-C9E94_RS22950;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=C9E94_RS22950;old_locus_tag=C9E94_23550
NZ_PYJR01000140.1	Protein Homology	CDS	48638	49354	.	+	0	ID=cds-WP_001213560.1;Parent=gene-C9E94_RS22950;Dbxref=GenBank:WP_001213560.1;Name=WP_001213560.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462835.1;locus_tag=C9E94_RS22950;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_001213560.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	49490	51652	.	+	.	ID=gene-C9E94_RS22955;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=C9E94_RS22955;old_locus_tag=C9E94_23555
NZ_PYJR01000140.1	Protein Homology	CDS	49490	51652	.	+	0	ID=cds-WP_000383436.1;Parent=gene-C9E94_RS22955;Dbxref=GenBank:WP_000383436.1;Name=WP_000383436.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462836.1;locus_tag=C9E94_RS22955;product=DNA helicase II;protein_id=WP_000383436.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	51912	51968	.	+	.	ID=gene-C9E94_RS23530;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=C9E94_RS23530
NZ_PYJR01000140.1	Protein Homology	CDS	51912	51968	.	+	0	ID=cds-WP_212723238.1;Parent=gene-C9E94_RS23530;Dbxref=GenBank:WP_212723238.1;Name=WP_212723238.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=C9E94_RS23530;product=YsgD/CorL family protein;protein_id=WP_212723238.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	52124	53074	.	+	.	ID=gene-C9E94_RS22965;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=C9E94_RS22965;old_locus_tag=C9E94_23565
NZ_PYJR01000140.1	Protein Homology	CDS	52124	53074	.	+	0	ID=cds-WP_000947139.1;Parent=gene-C9E94_RS22965;Dbxref=GenBank:WP_000947139.1;Name=WP_000947139.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=C9E94_RS22965;product=magnesium/cobalt transporter CorA;protein_id=WP_000947139.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	53122	53502	.	-	.	ID=gene-C9E94_RS22970;Name=C9E94_RS22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22970;old_locus_tag=C9E94_23570
NZ_PYJR01000140.1	Protein Homology	CDS	53122	53502	.	-	0	ID=cds-WP_000619297.1;Parent=gene-C9E94_RS22970;Dbxref=GenBank:WP_000619297.1;Name=WP_000619297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727015.1;locus_tag=C9E94_RS22970;product=hypothetical protein;protein_id=WP_000619297.1;transl_table=11
NZ_PYJR01000140.1	RefSeq	gene	53677	53938	.	+	.	ID=gene-C9E94_RS22975;Name=C9E94_RS22975;end_range=53938,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22975;old_locus_tag=C9E94_23575;partial=true
NZ_PYJR01000140.1	Protein Homology	CDS	53677	53938	.	+	0	ID=cds-WP_023259251.1;Parent=gene-C9E94_RS22975;Dbxref=GenBank:WP_023259251.1;Name=WP_023259251.1;end_range=53938,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001170054.1;locus_tag=C9E94_RS22975;partial=true;product=hypothetical protein;protein_id=WP_023259251.1;transl_table=11
##sequence-region NZ_PYJR01000100.1 1 52814
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000100.1	RefSeq	region	1	52814	.	+	.	ID=NZ_PYJR01000100.1:1..52814;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000100.1	RefSeq	gene	314	994	.	+	.	ID=gene-C9E94_RS14550;Name=C9E94_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14550;old_locus_tag=C9E94_14885
NZ_PYJR01000100.1	Protein Homology	CDS	314	994	.	+	0	ID=cds-WP_000106461.1;Parent=gene-C9E94_RS14550;Dbxref=GenBank:WP_000106461.1;Name=WP_000106461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462660.1;locus_tag=C9E94_RS14550;product=isochorismatase family protein;protein_id=WP_000106461.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	1223	1702	.	-	.	ID=gene-C9E94_RS14555;Name=cigR;gbkey=Gene;gene=cigR;gene_biotype=protein_coding;locus_tag=C9E94_RS14555;old_locus_tag=C9E94_14895
NZ_PYJR01000100.1	Protein Homology	CDS	1223	1702	.	-	0	ID=cds-WP_001065324.1;Parent=gene-C9E94_RS14555;Dbxref=GenBank:WP_001065324.1;Name=WP_001065324.1;gbkey=CDS;gene=cigR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462661.1;locus_tag=C9E94_RS14555;product=anti-virulence regulatory inner membrane protein CigR;protein_id=WP_001065324.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	1804	1890	.	-	.	ID=gene-C9E94_RS23680;Name=mgtU;gbkey=Gene;gene=mgtU;gene_biotype=protein_coding;locus_tag=C9E94_RS23680
NZ_PYJR01000100.1	Protein Homology	CDS	1804	1890	.	-	0	ID=cds-WP_252515021.1;Parent=gene-C9E94_RS23680;Dbxref=GenBank:WP_252515021.1;Name=WP_252515021.1;gbkey=CDS;gene=mgtU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_251009859.1;locus_tag=C9E94_RS23680;product=magnesium transporter protection protein MgtU;protein_id=WP_252515021.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	1903	1995	.	-	.	ID=gene-C9E94_RS14560;Name=mgtR;gbkey=Gene;gene=mgtR;gene_biotype=protein_coding;locus_tag=C9E94_RS14560;old_locus_tag=C9E94_14900
NZ_PYJR01000100.1	Protein Homology	CDS	1903	1995	.	-	0	ID=cds-WP_001082117.1;Parent=gene-C9E94_RS14560;Dbxref=GenBank:WP_001082117.1;Name=WP_001082117.1;gbkey=CDS;gene=mgtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082117.1;locus_tag=C9E94_RS14560;product=protein MgtR;protein_id=WP_001082117.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	2017	4743	.	-	.	ID=gene-C9E94_RS14565;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=C9E94_RS14565;old_locus_tag=C9E94_14905
NZ_PYJR01000100.1	Protein Homology	CDS	2017	4743	.	-	0	ID=cds-WP_000131288.1;Parent=gene-C9E94_RS14565;Dbxref=GenBank:WP_000131288.1;Name=WP_000131288.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462662.1;locus_tag=C9E94_RS14565;product=magnesium-translocating P-type ATPase;protein_id=WP_000131288.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	4963	5658	.	-	.	ID=gene-C9E94_RS14570;Name=C9E94_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14570;old_locus_tag=C9E94_14910
NZ_PYJR01000100.1	Protein Homology	CDS	4963	5658	.	-	0	ID=cds-WP_115178761.1;Parent=gene-C9E94_RS14570;Dbxref=GenBank:WP_115178761.1;Name=WP_115178761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462663.1;locus_tag=C9E94_RS14570;product=MgtC family protein;protein_id=WP_115178761.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	6164	7066	.	+	.	ID=gene-C9E94_RS14575;Name=C9E94_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14575;old_locus_tag=C9E94_14915
NZ_PYJR01000100.1	Protein Homology	CDS	6164	7066	.	+	0	ID=cds-WP_001682335.1;Parent=gene-C9E94_RS14575;Dbxref=GenBank:WP_001682335.1;Name=WP_001682335.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462664.1;locus_tag=C9E94_RS14575;product=EamA family transporter;protein_id=WP_001682335.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	7109	8050	.	-	.	ID=gene-C9E94_RS14580;Name=C9E94_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14580;old_locus_tag=C9E94_14920
NZ_PYJR01000100.1	Protein Homology	CDS	7109	8050	.	-	0	ID=cds-WP_000749539.1;Parent=gene-C9E94_RS14580;Dbxref=GenBank:WP_000749539.1;Name=WP_000749539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462665.1;locus_tag=C9E94_RS14580;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000749539.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	8286	9029	.	-	.	ID=gene-C9E94_RS14585;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=C9E94_RS14585;old_locus_tag=C9E94_14925
NZ_PYJR01000100.1	Protein Homology	CDS	8286	9029	.	-	0	ID=cds-WP_135401106.1;Parent=gene-C9E94_RS14585;Dbxref=GenBank:WP_135401106.1;Name=WP_135401106.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462666.1;locus_tag=C9E94_RS14585;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_135401106.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	9016	10125	.	-	.	ID=gene-C9E94_RS14590;Name=dgaE;gbkey=Gene;gene=dgaE;gene_biotype=protein_coding;locus_tag=C9E94_RS14590;old_locus_tag=C9E94_14930
NZ_PYJR01000100.1	Protein Homology	CDS	9016	10125	.	-	0	ID=cds-WP_058144838.1;Parent=gene-C9E94_RS14590;Dbxref=GenBank:WP_058144838.1;Name=WP_058144838.1;Ontology_term=GO:0016829;gbkey=CDS;gene=dgaE;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462667.1;locus_tag=C9E94_RS14590;product=D-glucosaminate-6-phosphate ammonia lyase;protein_id=WP_058144838.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	10129	10989	.	-	.	ID=gene-C9E94_RS14595;Name=C9E94_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14595;old_locus_tag=C9E94_14935
NZ_PYJR01000100.1	Protein Homology	CDS	10129	10989	.	-	0	ID=cds-WP_001526325.1;Parent=gene-C9E94_RS14595;Dbxref=GenBank:WP_001526325.1;Name=WP_001526325.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462668.3;locus_tag=C9E94_RS14595;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_001526325.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	10986	11735	.	-	.	ID=gene-C9E94_RS14600;Name=C9E94_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14600;old_locus_tag=C9E94_14940
NZ_PYJR01000100.1	Protein Homology	CDS	10986	11735	.	-	0	ID=cds-WP_135401107.1;Parent=gene-C9E94_RS14600;Dbxref=GenBank:WP_135401107.1;Name=WP_135401107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462669.1;locus_tag=C9E94_RS14600;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_135401107.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	11881	12366	.	-	.	ID=gene-C9E94_RS14605;Name=C9E94_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14605;old_locus_tag=C9E94_14945
NZ_PYJR01000100.1	Protein Homology	CDS	11881	12366	.	-	0	ID=cds-WP_001284295.1;Parent=gene-C9E94_RS14605;Dbxref=GenBank:WP_001284295.1;Name=WP_001284295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462670.1;locus_tag=C9E94_RS14605;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WP_001284295.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	12377	12802	.	-	.	ID=gene-C9E94_RS14610;Name=C9E94_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14610;old_locus_tag=C9E94_14950
NZ_PYJR01000100.1	Protein Homology	CDS	12377	12802	.	-	0	ID=cds-WP_000214106.1;Parent=gene-C9E94_RS14610;Dbxref=GenBank:WP_000214106.1;Name=WP_000214106.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462671.1;locus_tag=C9E94_RS14610;product=PTS sugar transporter subunit IIA;protein_id=WP_000214106.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	13021	15819	.	-	.	ID=gene-C9E94_RS14615;Name=dagR;gbkey=Gene;gene=dagR;gene_biotype=protein_coding;locus_tag=C9E94_RS14615;old_locus_tag=C9E94_14960
NZ_PYJR01000100.1	Protein Homology	CDS	13021	15819	.	-	0	ID=cds-WP_001252672.1;Parent=gene-C9E94_RS14615;Dbxref=GenBank:WP_001252672.1;Name=WP_001252672.1;Ontology_term=GO:0006355,GO:0009401,GO:0005524,GO:0016887;gbkey=CDS;gene=dagR;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=C9E94_RS14615;product=transcriptional regulator DagR;protein_id=WP_001252672.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	16016	16309	.	+	.	ID=gene-C9E94_RS14620;Name=C9E94_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14620;old_locus_tag=C9E94_14965
NZ_PYJR01000100.1	Protein Homology	CDS	16016	16309	.	+	0	ID=cds-WP_000824217.1;Parent=gene-C9E94_RS14620;Dbxref=GenBank:WP_000824217.1;Name=WP_000824217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462673.1;locus_tag=C9E94_RS14620;product=YicS family protein;protein_id=WP_000824217.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	16415	17797	.	+	.	ID=gene-C9E94_RS14625;Name=C9E94_RS14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14625;old_locus_tag=C9E94_14970
NZ_PYJR01000100.1	Protein Homology	CDS	16415	17797	.	+	0	ID=cds-WP_001270471.1;Parent=gene-C9E94_RS14625;Dbxref=GenBank:WP_001270471.1;Name=WP_001270471.1;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462674.1;locus_tag=C9E94_RS14625;product=glycoside hydrolase family 1 protein;protein_id=WP_001270471.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	17857	19050	.	-	.	ID=gene-C9E94_RS14630;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=C9E94_RS14630;old_locus_tag=C9E94_14975
NZ_PYJR01000100.1	Protein Homology	CDS	17857	19050	.	-	0	ID=cds-WP_001004798.1;Parent=gene-C9E94_RS14630;Dbxref=GenBank:WP_001004798.1;Name=WP_001004798.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462675.1;locus_tag=C9E94_RS14630;product=purine ribonucleoside efflux pump NepI;protein_id=WP_001004798.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	19266	19625	.	+	.	ID=gene-C9E94_RS14635;Name=C9E94_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14635;old_locus_tag=C9E94_14980
NZ_PYJR01000100.1	Protein Homology	CDS	19266	19625	.	+	0	ID=cds-WP_135401108.1;Parent=gene-C9E94_RS14635;Dbxref=GenBank:WP_135401108.1;Name=WP_135401108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462676.1;locus_tag=C9E94_RS14635;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_135401108.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	19609	19932	.	+	.	ID=gene-C9E94_RS14640;Name=C9E94_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14640;old_locus_tag=C9E94_14985
NZ_PYJR01000100.1	Protein Homology	CDS	19609	19932	.	+	0	ID=cds-WP_001274841.1;Parent=gene-C9E94_RS14640;Dbxref=GenBank:WP_001274841.1;Name=WP_001274841.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462677.1;locus_tag=C9E94_RS14640;product=helix-turn-helix domain-containing protein;protein_id=WP_001274841.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	20023	20292	.	-	.	ID=gene-C9E94_RS14645;Name=C9E94_RS14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14645;old_locus_tag=C9E94_14990
NZ_PYJR01000100.1	Protein Homology	CDS	20023	20292	.	-	0	ID=cds-WP_000621108.1;Parent=gene-C9E94_RS14645;Dbxref=GenBank:WP_000621108.1;Name=WP_000621108.1;Ontology_term=GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462678.1;locus_tag=C9E94_RS14645;product=HPr family phosphocarrier protein;protein_id=WP_000621108.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	20302	21162	.	-	.	ID=gene-C9E94_RS14650;Name=C9E94_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14650;old_locus_tag=C9E94_14995
NZ_PYJR01000100.1	Protein Homology	CDS	20302	21162	.	-	0	ID=cds-WP_080169970.1;Parent=gene-C9E94_RS14650;Dbxref=GenBank:WP_080169970.1;Name=WP_080169970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462679.1;locus_tag=C9E94_RS14650;product=class II aldolase;protein_id=WP_080169970.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	21225	22709	.	-	.	ID=gene-C9E94_RS14655;Name=C9E94_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14655;old_locus_tag=C9E94_15000
NZ_PYJR01000100.1	Protein Homology	CDS	21225	22709	.	-	0	ID=cds-WP_135401109.1;Parent=gene-C9E94_RS14655;Dbxref=GenBank:WP_135401109.1;Name=WP_135401109.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462680.1;locus_tag=C9E94_RS14655;product=FGGY-family carbohydrate kinase;protein_id=WP_135401109.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	22702	24060	.	-	.	ID=gene-C9E94_RS14660;Name=C9E94_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14660;old_locus_tag=C9E94_15005
NZ_PYJR01000100.1	Protein Homology	CDS	22702	24060	.	-	0	ID=cds-WP_000997825.1;Parent=gene-C9E94_RS14660;Dbxref=GenBank:WP_000997825.1;Name=WP_000997825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462681.1;locus_tag=C9E94_RS14660;product=PTS galactitol transporter subunit IIC;protein_id=WP_000997825.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	24136	24423	.	-	.	ID=gene-C9E94_RS14665;Name=C9E94_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14665;old_locus_tag=C9E94_15010
NZ_PYJR01000100.1	Protein Homology	CDS	24136	24423	.	-	0	ID=cds-WP_000041396.1;Parent=gene-C9E94_RS14665;Dbxref=GenBank:WP_000041396.1;Name=WP_000041396.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462682.1;locus_tag=C9E94_RS14665;product=PTS sugar transporter subunit IIB;protein_id=WP_000041396.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	24420	24893	.	-	.	ID=gene-C9E94_RS14670;Name=C9E94_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14670;old_locus_tag=C9E94_15015
NZ_PYJR01000100.1	Protein Homology	CDS	24420	24893	.	-	0	ID=cds-WP_001152237.1;Parent=gene-C9E94_RS14670;Dbxref=GenBank:WP_001152237.1;Name=WP_001152237.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462683.1;locus_tag=C9E94_RS14670;product=PTS sugar transporter subunit IIA;protein_id=WP_001152237.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	24911	25654	.	-	.	ID=gene-C9E94_RS14675;Name=C9E94_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14675;old_locus_tag=C9E94_15020
NZ_PYJR01000100.1	Protein Homology	CDS	24911	25654	.	-	0	ID=cds-WP_000854956.1;Parent=gene-C9E94_RS14675;Dbxref=GenBank:WP_000854956.1;Name=WP_000854956.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462684.1;locus_tag=C9E94_RS14675;product=GntR family transcriptional regulator;protein_id=WP_000854956.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	26007	26459	.	-	.	ID=gene-C9E94_RS14680;Name=C9E94_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14680;old_locus_tag=C9E94_15025
NZ_PYJR01000100.1	Protein Homology	CDS	26007	26459	.	-	0	ID=cds-WP_001519640.1;Parent=gene-C9E94_RS14680;Dbxref=GenBank:WP_001519640.1;Name=WP_001519640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462685.1;locus_tag=C9E94_RS14680;product=DUF1198 domain-containing protein;protein_id=WP_001519640.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	26652	28043	.	-	.	ID=gene-C9E94_RS14685;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=C9E94_RS14685;old_locus_tag=C9E94_15030
NZ_PYJR01000100.1	Protein Homology	CDS	26652	28043	.	-	0	ID=cds-WP_000879181.1;Parent=gene-C9E94_RS14685;Dbxref=GenBank:WP_000879181.1;Name=WP_000879181.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462686.1;locus_tag=C9E94_RS14685;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_000879181.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	28186	29514	.	-	.	ID=gene-C9E94_RS14690;Name=C9E94_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14690;old_locus_tag=C9E94_15035
NZ_PYJR01000100.1	Protein Homology	CDS	28186	29514	.	-	0	ID=cds-WP_094889131.1;Parent=gene-C9E94_RS14690;Dbxref=GenBank:WP_094889131.1;Name=WP_094889131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462687.1;locus_tag=C9E94_RS14690;product=MFS transporter;protein_id=WP_094889131.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	29524	31026	.	-	.	ID=gene-C9E94_RS14695;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=C9E94_RS14695;old_locus_tag=C9E94_15040
NZ_PYJR01000100.1	Protein Homology	CDS	29524	31026	.	-	0	ID=cds-WP_094889130.1;Parent=gene-C9E94_RS14695;Dbxref=GenBank:WP_094889130.1;Name=WP_094889130.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462688.1;locus_tag=C9E94_RS14695;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_094889130.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	31026	31616	.	-	.	ID=gene-C9E94_RS14700;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=C9E94_RS14700;old_locus_tag=C9E94_15045
NZ_PYJR01000100.1	Protein Homology	CDS	31026	31616	.	-	0	ID=cds-WP_000633672.1;Parent=gene-C9E94_RS14700;Dbxref=GenBank:WP_000633672.1;Name=WP_000633672.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462689.1;locus_tag=C9E94_RS14700;product=transcriptional regulator UhpA;protein_id=WP_000633672.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	31691	32704	.	-	.	ID=gene-C9E94_RS14705;Name=C9E94_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14705;old_locus_tag=C9E94_15050
NZ_PYJR01000100.1	Protein Homology	CDS	31691	32704	.	-	0	ID=cds-WP_000213206.1;Parent=gene-C9E94_RS14705;Dbxref=GenBank:WP_000213206.1;Name=WP_000213206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462690.1;locus_tag=C9E94_RS14705;product=aldose 1-epimerase family protein;protein_id=WP_000213206.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	32716	34032	.	-	.	ID=gene-C9E94_RS14710;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=C9E94_RS14710;old_locus_tag=C9E94_15055
NZ_PYJR01000100.1	Protein Homology	CDS	32716	34032	.	-	0	ID=cds-WP_000998358.1;Parent=gene-C9E94_RS14710;Dbxref=GenBank:WP_000998358.1;Name=WP_000998358.1;Ontology_term=GO:0015756,GO:0015150,GO:0015535;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA,fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462691.1;locus_tag=C9E94_RS14710;product=L-fucose:H+ symporter permease;protein_id=WP_000998358.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	34063	34983	.	-	.	ID=gene-C9E94_RS14715;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=C9E94_RS14715;old_locus_tag=C9E94_15060
NZ_PYJR01000100.1	Protein Homology	CDS	34063	34983	.	-	0	ID=cds-WP_000350272.1;Parent=gene-C9E94_RS14715;Dbxref=GenBank:WP_000350272.1;Name=WP_000350272.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462692.1;locus_tag=C9E94_RS14715;product=ribokinase;protein_id=WP_000350272.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	35297	36082	.	+	.	ID=gene-C9E94_RS14720;Name=C9E94_RS14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14720;old_locus_tag=C9E94_15065
NZ_PYJR01000100.1	Protein Homology	CDS	35297	36082	.	+	0	ID=cds-WP_000448638.1;Parent=gene-C9E94_RS14720;Dbxref=GenBank:WP_000448638.1;Name=WP_000448638.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462693.1;locus_tag=C9E94_RS14720;product=DeoR family transcriptional regulator;protein_id=WP_000448638.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	36084	36374	.	-	.	ID=gene-C9E94_RS14725;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=C9E94_RS14725;old_locus_tag=C9E94_15070
NZ_PYJR01000100.1	Protein Homology	CDS	36084	36374	.	-	0	ID=cds-WP_001171826.1;Parent=gene-C9E94_RS14725;Dbxref=GenBank:WP_001171826.1;Name=WP_001171826.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462694.1;locus_tag=C9E94_RS14725;product=acetolactate synthase small subunit;protein_id=WP_001171826.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	36378	38066	.	-	.	ID=gene-C9E94_RS14730;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=C9E94_RS14730;old_locus_tag=C9E94_15075
NZ_PYJR01000100.1	Protein Homology	CDS	36378	38066	.	-	0	ID=cds-WP_000168439.1;Parent=gene-C9E94_RS14730;Dbxref=GenBank:WP_000168439.1;Name=WP_000168439.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=C9E94_RS14730;product=acetolactate synthase large subunit;protein_id=WP_000168439.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	38173	38271	.	-	.	ID=gene-C9E94_RS14735;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=C9E94_RS14735;old_locus_tag=C9E94_15080
NZ_PYJR01000100.1	Protein Homology	CDS	38173	38271	.	-	0	ID=cds-WP_001541152.1;Parent=gene-C9E94_RS14735;Dbxref=GenBank:WP_001541152.1;Name=WP_001541152.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462696.1;locus_tag=C9E94_RS14735;product=ilvB operon leader peptide IvbL;protein_id=WP_001541152.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	pseudogene	38794	38908	.	+	.	ID=gene-C9E94_RS14740;Name=C9E94_RS14740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS14740;old_locus_tag=C9E94_15085;pseudo=true
NZ_PYJR01000100.1	Protein Homology	CDS	38794	38908	.	+	0	ID=cds-C9E94_RS14740;Parent=gene-C9E94_RS14740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009325922.1;locus_tag=C9E94_RS14740;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	38905	38994	.	+	.	ID=gene-C9E94_RS14745;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=C9E94_RS14745;old_locus_tag=C9E94_15090
NZ_PYJR01000100.1	Protein Homology	CDS	38905	38994	.	+	0	ID=cds-WP_000117642.1;Parent=gene-C9E94_RS14745;Dbxref=GenBank:WP_000117642.1;Name=WP_000117642.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453107.1;locus_tag=C9E94_RS14745;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_000117642.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	39087	39947	.	+	.	ID=gene-C9E94_RS14750;Name=C9E94_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14750;old_locus_tag=C9E94_15095
NZ_PYJR01000100.1	Protein Homology	CDS	39087	39947	.	+	0	ID=cds-WP_001531658.1;Parent=gene-C9E94_RS14750;Dbxref=GenBank:WP_001531658.1;Name=WP_001531658.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462698.3;locus_tag=C9E94_RS14750;product=DMT family transporter;protein_id=WP_001531658.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	40150	41334	.	+	.	ID=gene-C9E94_RS14755;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=C9E94_RS14755;old_locus_tag=C9E94_15100
NZ_PYJR01000100.1	Protein Homology	CDS	40150	41334	.	+	0	ID=cds-WP_000828737.1;Parent=gene-C9E94_RS14755;Dbxref=GenBank:WP_000828737.1;Name=WP_000828737.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462699.1;locus_tag=C9E94_RS14755;product=multidrug efflux MFS transporter EmrD;protein_id=WP_000828737.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	41261	42346	.	-	.	ID=gene-C9E94_RS14760;Name=C9E94_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14760;old_locus_tag=C9E94_15105
NZ_PYJR01000100.1	Protein Homology	CDS	41261	42346	.	-	0	ID=cds-WP_000238928.1;Parent=gene-C9E94_RS14760;Dbxref=GenBank:WP_000238928.1;Name=WP_000238928.1;Ontology_term=GO:0000272,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462700.1;locus_tag=C9E94_RS14760;product=cellulase family glycosylhydrolase;protein_id=WP_000238928.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	42410	43333	.	-	.	ID=gene-C9E94_RS14765;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=C9E94_RS14765;old_locus_tag=C9E94_15110
NZ_PYJR01000100.1	Protein Homology	CDS	42410	43333	.	-	0	ID=cds-WP_001522218.1;Parent=gene-C9E94_RS14765;Dbxref=GenBank:WP_001522218.1;Name=WP_001522218.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462701.1;locus_tag=C9E94_RS14765;product=DNA-binding transcriptional regulator DsdC;protein_id=WP_001522218.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	43559	44896	.	+	.	ID=gene-C9E94_RS14770;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=C9E94_RS14770;old_locus_tag=C9E94_15115
NZ_PYJR01000100.1	Protein Homology	CDS	43559	44896	.	+	0	ID=cds-WP_000543317.1;Parent=gene-C9E94_RS14770;Dbxref=GenBank:WP_000543317.1;Name=WP_000543317.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462702.1;locus_tag=C9E94_RS14770;product=D-serine transporter DsdX;protein_id=WP_000543317.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	44914	46236	.	+	.	ID=gene-C9E94_RS14775;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=C9E94_RS14775;old_locus_tag=C9E94_15120
NZ_PYJR01000100.1	Protein Homology	CDS	44914	46236	.	+	0	ID=cds-WP_000427994.1;Parent=gene-C9E94_RS14775;Dbxref=GenBank:WP_000427994.1;Name=WP_000427994.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;gene=dsdA;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462703.1;locus_tag=C9E94_RS14775;product=D-serine ammonia-lyase;protein_id=WP_000427994.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	46318	46848	.	-	.	ID=gene-C9E94_RS14780;Name=C9E94_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14780;old_locus_tag=C9E94_15125
NZ_PYJR01000100.1	Protein Homology	CDS	46318	46848	.	-	0	ID=cds-WP_001727817.1;Parent=gene-C9E94_RS14780;Dbxref=GenBank:WP_001727817.1;Name=WP_001727817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462704.1;locus_tag=C9E94_RS14780;product=radical SAM protein;protein_id=WP_001727817.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	46845	47207	.	-	.	ID=gene-C9E94_RS14785;Name=C9E94_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14785;old_locus_tag=C9E94_15130
NZ_PYJR01000100.1	Protein Homology	CDS	46845	47207	.	-	0	ID=cds-WP_001113454.1;Parent=gene-C9E94_RS14785;Dbxref=GenBank:WP_001113454.1;Name=WP_001113454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462705.1;locus_tag=C9E94_RS14785;product=DUF202 domain-containing protein;protein_id=WP_001113454.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	47197	47544	.	-	.	ID=gene-C9E94_RS14790;Name=C9E94_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14790;old_locus_tag=C9E94_15135
NZ_PYJR01000100.1	Protein Homology	CDS	47197	47544	.	-	0	ID=cds-WP_000703964.1;Parent=gene-C9E94_RS14790;Dbxref=GenBank:WP_000703964.1;Name=WP_000703964.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462706.1;locus_tag=C9E94_RS14790;product=YidH family protein;protein_id=WP_000703964.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	47664	47981	.	-	.	ID=gene-C9E94_RS23385;Name=C9E94_RS23385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23385
NZ_PYJR01000100.1	GeneMarkS-2+	CDS	47664	47981	.	-	0	ID=cds-WP_167853652.1;Parent=gene-C9E94_RS23385;Dbxref=GenBank:WP_167853652.1;Name=WP_167853652.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS23385;product=hypothetical protein;protein_id=WP_167853652.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	47988	49649	.	-	.	ID=gene-C9E94_RS14795;Name=C9E94_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14795;old_locus_tag=C9E94_15140
NZ_PYJR01000100.1	Protein Homology	CDS	47988	49649	.	-	0	ID=cds-WP_001279793.1;Parent=gene-C9E94_RS14795;Dbxref=GenBank:WP_001279793.1;Name=WP_001279793.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462707.1;locus_tag=C9E94_RS14795;product=putative transporter;protein_id=WP_001279793.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	49838	50266	.	-	.	ID=gene-C9E94_RS14800;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=C9E94_RS14800;old_locus_tag=C9E94_15145
NZ_PYJR01000100.1	Protein Homology	CDS	49838	50266	.	-	0	ID=cds-WP_001246919.1;Parent=gene-C9E94_RS14800;Dbxref=GenBank:WP_001246919.1;Name=WP_001246919.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpB;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462708.3;locus_tag=C9E94_RS14800;product=small heat shock chaperone IbpB;protein_id=WP_001246919.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	50376	50789	.	-	.	ID=gene-C9E94_RS14805;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=C9E94_RS14805;old_locus_tag=C9E94_15150
NZ_PYJR01000100.1	Protein Homology	CDS	50376	50789	.	-	0	ID=cds-WP_001532742.1;Parent=gene-C9E94_RS14805;Dbxref=GenBank:WP_001532742.1;Name=WP_001532742.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpA;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=C9E94_RS14805;product=small heat shock chaperone IbpA;protein_id=WP_001532742.1;transl_table=11
NZ_PYJR01000100.1	cmsearch	sequence_feature	50783	50856	.	-	.	ID=id-NZ_PYJR01000100.1:50783..50856;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PYJR01000100.1	RefSeq	gene	51099	51431	.	+	.	ID=gene-C9E94_RS14810;Name=C9E94_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14810;old_locus_tag=C9E94_15155
NZ_PYJR01000100.1	Protein Homology	CDS	51099	51431	.	+	0	ID=cds-WP_001581211.1;Parent=gene-C9E94_RS14810;Dbxref=GenBank:WP_001581211.1;Name=WP_001581211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675643.1;locus_tag=C9E94_RS14810;product=YceK/YidQ family lipoprotein;protein_id=WP_001581211.1;transl_table=11
NZ_PYJR01000100.1	RefSeq	gene	51433	52659	.	-	.	ID=gene-C9E94_RS14815;Name=C9E94_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14815;old_locus_tag=C9E94_15160
NZ_PYJR01000100.1	Protein Homology	CDS	51433	52659	.	-	0	ID=cds-WP_061378611.1;Parent=gene-C9E94_RS14815;Dbxref=GenBank:WP_061378611.1;Name=WP_061378611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462711.1;locus_tag=C9E94_RS14815;product=DUF3748 domain-containing protein;protein_id=WP_061378611.1;transl_table=11
##sequence-region NZ_PYJR01000126.1 1 192262
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000126.1	RefSeq	region	1	192262	.	+	.	ID=NZ_PYJR01000126.1:1..192262;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000126.1	RefSeq	gene	240	3269	.	+	.	ID=gene-C9E94_RS18200;Name=ehaB;gbkey=Gene;gene=ehaB;gene_biotype=protein_coding;locus_tag=C9E94_RS18200;old_locus_tag=C9E94_18640
NZ_PYJR01000126.1	Protein Homology	CDS	240	3269	.	+	0	ID=cds-WP_077463696.1;Parent=gene-C9E94_RS18200;Dbxref=GenBank:WP_077463696.1;Name=WP_077463696.1;gbkey=CDS;gene=ehaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000556401.1;locus_tag=C9E94_RS18200;product=autotransporter adhesin EhaB;protein_id=WP_077463696.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	3355	3978	.	+	.	ID=gene-C9E94_RS18205;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=C9E94_RS18205;old_locus_tag=C9E94_18645
NZ_PYJR01000126.1	Protein Homology	CDS	3355	3978	.	+	0	ID=cds-WP_000950242.1;Parent=gene-C9E94_RS18205;Dbxref=GenBank:WP_000950242.1;Name=WP_000950242.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459369.1;locus_tag=C9E94_RS18205;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WP_000950242.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	4023	5180	.	-	.	ID=gene-C9E94_RS18210;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=C9E94_RS18210;old_locus_tag=C9E94_18650
NZ_PYJR01000126.1	Protein Homology	CDS	4023	5180	.	-	0	ID=cds-WP_115409680.1;Parent=gene-C9E94_RS18210;Dbxref=GenBank:WP_115409680.1;Name=WP_115409680.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=C9E94_RS18210;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_115409680.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	5527	6747	.	+	.	ID=gene-C9E94_RS18220;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=C9E94_RS18220;old_locus_tag=C9E94_18660
NZ_PYJR01000126.1	Protein Homology	CDS	5527	6747	.	+	0	ID=cds-WP_000477024.1;Parent=gene-C9E94_RS18220;Dbxref=GenBank:WP_000477024.1;Name=WP_000477024.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459371.1;locus_tag=C9E94_RS18220;product=peptide antibiotic transporter SbmA;protein_id=WP_000477024.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	6762	7856	.	+	.	ID=gene-C9E94_RS18225;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=C9E94_RS18225;old_locus_tag=C9E94_18665
NZ_PYJR01000126.1	Protein Homology	CDS	6762	7856	.	+	0	ID=cds-WP_023182347.1;Parent=gene-C9E94_RS18225;Dbxref=GenBank:WP_023182347.1;Name=WP_023182347.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459372.1;locus_tag=C9E94_RS18225;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WP_023182347.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	7894	8202	.	-	.	ID=gene-C9E94_RS18230;Name=C9E94_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18230;old_locus_tag=C9E94_18670
NZ_PYJR01000126.1	Protein Homology	CDS	7894	8202	.	-	0	ID=cds-WP_000763139.1;Parent=gene-C9E94_RS18230;Dbxref=GenBank:WP_000763139.1;Name=WP_000763139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459373.1;locus_tag=C9E94_RS18230;product=YaiY family protein;protein_id=WP_000763139.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	8470	8685	.	+	.	ID=gene-C9E94_RS18235;Name=C9E94_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18235;old_locus_tag=C9E94_18675
NZ_PYJR01000126.1	Protein Homology	CDS	8470	8685	.	+	0	ID=cds-WP_001239240.1;Parent=gene-C9E94_RS18235;Dbxref=GenBank:WP_001239240.1;Name=WP_001239240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459374.1;locus_tag=C9E94_RS18235;product=DUF2754 family protein;protein_id=WP_001239240.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	8711	9805	.	-	.	ID=gene-C9E94_RS18240;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=C9E94_RS18240;old_locus_tag=C9E94_18680
NZ_PYJR01000126.1	Protein Homology	CDS	8711	9805	.	-	0	ID=cds-WP_001096595.1;Parent=gene-C9E94_RS18240;Dbxref=GenBank:WP_001096595.1;Name=WP_001096595.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459375.1;locus_tag=C9E94_RS18240;product=D-alanine--D-alanine ligase;protein_id=WP_001096595.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	9883	10596	.	+	.	ID=gene-C9E94_RS18245;Name=C9E94_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18245;old_locus_tag=C9E94_18685
NZ_PYJR01000126.1	Protein Homology	CDS	9883	10596	.	+	0	ID=cds-WP_000480792.1;Parent=gene-C9E94_RS18245;Dbxref=GenBank:WP_000480792.1;Name=WP_000480792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459376.1;locus_tag=C9E94_RS18245;product=extensin-like domain-containing protein;protein_id=WP_000480792.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	10765	11976	.	+	.	ID=gene-C9E94_RS18250;Name=C9E94_RS18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18250;old_locus_tag=C9E94_18690
NZ_PYJR01000126.1	Protein Homology	CDS	10765	11976	.	+	0	ID=cds-WP_000446768.1;Parent=gene-C9E94_RS18250;Dbxref=GenBank:WP_000446768.1;Name=WP_000446768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459377.1;locus_tag=C9E94_RS18250;product=multidrug efflux MFS transporter;protein_id=WP_000446768.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	12273	12533	.	+	.	ID=gene-C9E94_RS18255;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=C9E94_RS18255;old_locus_tag=C9E94_18695
NZ_PYJR01000126.1	Protein Homology	CDS	12273	12533	.	+	0	ID=cds-WP_001518423.1;Parent=gene-C9E94_RS18255;Dbxref=GenBank:WP_001518423.1;Name=WP_001518423.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748986.1;locus_tag=C9E94_RS18255;product=anti-adapter protein IraP;protein_id=WP_001518423.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	12887	13207	.	+	.	ID=gene-C9E94_RS18265;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=C9E94_RS18265;old_locus_tag=C9E94_18705
NZ_PYJR01000126.1	Protein Homology	CDS	12887	13207	.	+	0	ID=cds-WP_000705165.1;Parent=gene-C9E94_RS18265;Dbxref=GenBank:WP_000705165.1;Name=WP_000705165.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459379.1;locus_tag=C9E94_RS18265;product=phosphate starvation-inducible protein PsiF;protein_id=WP_000705165.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	13299	14411	.	+	.	ID=gene-C9E94_RS18270;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=C9E94_RS18270;old_locus_tag=C9E94_18710
NZ_PYJR01000126.1	Protein Homology	CDS	13299	14411	.	+	0	ID=cds-WP_000484098.1;Parent=gene-C9E94_RS18270;Dbxref=GenBank:WP_000484098.1;Name=WP_000484098.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459380.1;locus_tag=C9E94_RS18270;product=diguanylate cyclase AdrA;protein_id=WP_000484098.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	14426	15235	.	-	.	ID=gene-C9E94_RS18275;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=C9E94_RS18275;old_locus_tag=C9E94_18715
NZ_PYJR01000126.1	Protein Homology	CDS	14426	15235	.	-	0	ID=cds-WP_000412193.1;Parent=gene-C9E94_RS18275;Dbxref=GenBank:WP_000412193.1;Name=WP_000412193.1;Ontology_term=GO:0055129,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459381.1;locus_tag=C9E94_RS18275;product=pyrroline-5-carboxylate reductase;protein_id=WP_000412193.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	15375	15830	.	+	.	ID=gene-C9E94_RS18280;Name=C9E94_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18280;old_locus_tag=C9E94_18720
NZ_PYJR01000126.1	Protein Homology	CDS	15375	15830	.	+	0	ID=cds-WP_000158137.1;Parent=gene-C9E94_RS18280;Dbxref=GenBank:WP_000158137.1;Name=WP_000158137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459382.1;locus_tag=C9E94_RS18280;product=YaiI/YqxD family protein;protein_id=WP_000158137.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	16015	16560	.	+	.	ID=gene-C9E94_RS18285;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=C9E94_RS18285;old_locus_tag=C9E94_18725
NZ_PYJR01000126.1	Protein Homology	CDS	16015	16560	.	+	0	ID=cds-WP_000983569.1;Parent=gene-C9E94_RS18285;Dbxref=GenBank:WP_000983569.1;Name=WP_000983569.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459383.1;locus_tag=C9E94_RS18285;product=shikimate kinase AroL;protein_id=WP_000983569.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	16587	16778	.	+	.	ID=gene-C9E94_RS18290;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=C9E94_RS18290;old_locus_tag=C9E94_18730
NZ_PYJR01000126.1	Protein Homology	CDS	16587	16778	.	+	0	ID=cds-WP_001143161.1;Parent=gene-C9E94_RS18290;Dbxref=GenBank:WP_001143161.1;Name=WP_001143161.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459384.1;locus_tag=C9E94_RS18290;product=protein YaiA;protein_id=WP_001143161.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	17029	17706	.	+	.	ID=gene-C9E94_RS18295;Name=C9E94_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18295;old_locus_tag=C9E94_18735
NZ_PYJR01000126.1	Protein Homology	CDS	17029	17706	.	+	0	ID=cds-WP_001276437.1;Parent=gene-C9E94_RS18295;Dbxref=GenBank:WP_001276437.1;Name=WP_001276437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459385.1;locus_tag=C9E94_RS18295;product=AroM family protein;protein_id=WP_001276437.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	17777	18061	.	+	.	ID=gene-C9E94_RS18300;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=C9E94_RS18300;old_locus_tag=C9E94_18740
NZ_PYJR01000126.1	Protein Homology	CDS	17777	18061	.	+	0	ID=cds-WP_000941945.1;Parent=gene-C9E94_RS18300;Dbxref=GenBank:WP_000941945.1;Name=WP_000941945.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459386.1;locus_tag=C9E94_RS18300;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_000941945.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	18099	19010	.	-	.	ID=gene-C9E94_RS18305;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=C9E94_RS18305;old_locus_tag=C9E94_18745
NZ_PYJR01000126.1	Protein Homology	CDS	18099	19010	.	-	0	ID=cds-WP_000964305.1;Parent=gene-C9E94_RS18305;Dbxref=GenBank:WP_000964305.1;Name=WP_000964305.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=C9E94_RS18305;product=recombination-associated protein RdgC;protein_id=WP_000964305.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	19136	20044	.	+	.	ID=gene-C9E94_RS18310;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=C9E94_RS18310;old_locus_tag=C9E94_18750
NZ_PYJR01000126.1	Protein Homology	CDS	19136	20044	.	+	0	ID=cds-WP_001219277.1;Parent=gene-C9E94_RS18310;Dbxref=GenBank:WP_001219277.1;Name=WP_001219277.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459388.1;locus_tag=C9E94_RS18310;product=fructokinase;protein_id=WP_001219277.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	20064	21236	.	-	.	ID=gene-C9E94_RS18315;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=C9E94_RS18315;old_locus_tag=C9E94_18755
NZ_PYJR01000126.1	Protein Homology	CDS	20064	21236	.	-	0	ID=cds-WP_023204884.1;Parent=gene-C9E94_RS18315;Dbxref=GenBank:WP_023204884.1;Name=WP_023204884.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459389.1;locus_tag=C9E94_RS18315;product=MFS transporter AraJ;protein_id=WP_023204884.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	21409	24549	.	-	.	ID=gene-C9E94_RS18320;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=C9E94_RS18320;old_locus_tag=C9E94_18760
NZ_PYJR01000126.1	Protein Homology	CDS	21409	24549	.	-	0	ID=cds-WP_135401165.1;Parent=gene-C9E94_RS18320;Dbxref=GenBank:WP_135401165.1;Name=WP_135401165.1;Ontology_term=GO:0006260,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459390.1;locus_tag=C9E94_RS18320;product=exonuclease subunit SbcC;protein_id=WP_135401165.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	24546	25748	.	-	.	ID=gene-C9E94_RS18325;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=C9E94_RS18325;old_locus_tag=C9E94_18765
NZ_PYJR01000126.1	Protein Homology	CDS	24546	25748	.	-	0	ID=cds-WP_135401166.1;Parent=gene-C9E94_RS18325;Dbxref=GenBank:WP_135401166.1;Name=WP_135401166.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459391.1;locus_tag=C9E94_RS18325;product=exonuclease subunit SbcD;protein_id=WP_135401166.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	25963	26652	.	+	.	ID=gene-C9E94_RS18330;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=C9E94_RS18330;old_locus_tag=C9E94_18770
NZ_PYJR01000126.1	Protein Homology	CDS	25963	26652	.	+	0	ID=cds-WP_000113918.1;Parent=gene-C9E94_RS18330;Dbxref=GenBank:WP_000113918.1;Name=WP_000113918.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=C9E94_RS18330;product=phosphate response regulator transcription factor PhoB;protein_id=WP_000113918.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	26722	28017	.	+	.	ID=gene-C9E94_RS18335;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=C9E94_RS18335;old_locus_tag=C9E94_18775
NZ_PYJR01000126.1	Protein Homology	CDS	26722	28017	.	+	0	ID=cds-WP_000893645.1;Parent=gene-C9E94_RS18335;Dbxref=GenBank:WP_000893645.1;Name=WP_000893645.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459393.1;locus_tag=C9E94_RS18335;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_000893645.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	28426	29745	.	+	.	ID=gene-C9E94_RS18340;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=C9E94_RS18340;old_locus_tag=C9E94_18780
NZ_PYJR01000126.1	Protein Homology	CDS	28426	29745	.	+	0	ID=cds-WP_000149625.1;Parent=gene-C9E94_RS18340;Dbxref=GenBank:WP_000149625.1;Name=WP_000149625.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459394.1;locus_tag=C9E94_RS18340;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_000149625.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	29820	31190	.	+	.	ID=gene-C9E94_RS18345;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=C9E94_RS18345;old_locus_tag=C9E94_18785
NZ_PYJR01000126.1	Protein Homology	CDS	29820	31190	.	+	0	ID=cds-WP_001727981.1;Parent=gene-C9E94_RS18345;Dbxref=GenBank:WP_001727981.1;Name=WP_001727981.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459395.1;locus_tag=C9E94_RS18345;product=proline-specific permease ProY;protein_id=WP_001727981.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	31352	33169	.	+	.	ID=gene-C9E94_RS18350;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=C9E94_RS18350;old_locus_tag=C9E94_18790
NZ_PYJR01000126.1	Protein Homology	CDS	31352	33169	.	+	0	ID=cds-WP_000930715.1;Parent=gene-C9E94_RS18350;Dbxref=GenBank:WP_000930715.1;Name=WP_000930715.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459396.1;locus_tag=C9E94_RS18350;product=maltodextrin glucosidase;protein_id=WP_000930715.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	33241	33843	.	-	.	ID=gene-C9E94_RS18355;Name=C9E94_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18355;old_locus_tag=C9E94_18795
NZ_PYJR01000126.1	Protein Homology	CDS	33241	33843	.	-	0	ID=cds-WP_000244731.1;Parent=gene-C9E94_RS18355;Dbxref=GenBank:WP_000244731.1;Name=WP_000244731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459397.1;locus_tag=C9E94_RS18355;product=peroxiredoxin;protein_id=WP_000244731.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	34053	34634	.	-	.	ID=gene-C9E94_RS18360;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=C9E94_RS18360;old_locus_tag=C9E94_18800
NZ_PYJR01000126.1	Protein Homology	CDS	34053	34634	.	-	0	ID=cds-WP_001009858.1;Parent=gene-C9E94_RS18360;Dbxref=GenBank:WP_001009858.1;Name=WP_001009858.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459398.1;locus_tag=C9E94_RS18360;product=ACP phosphodiesterase;protein_id=WP_001009858.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	34728	35792	.	+	.	ID=gene-C9E94_RS18365;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=C9E94_RS18365;old_locus_tag=C9E94_18805
NZ_PYJR01000126.1	Protein Homology	CDS	34728	35792	.	+	0	ID=cds-WP_001266530.1;Parent=gene-C9E94_RS18365;Dbxref=GenBank:WP_001266530.1;Name=WP_001266530.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459399.1;locus_tag=C9E94_RS18365;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001266530.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	35989	37116	.	+	.	ID=gene-C9E94_RS18370;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=C9E94_RS18370;old_locus_tag=C9E94_18815
NZ_PYJR01000126.1	Protein Homology	CDS	35989	37116	.	+	0	ID=cds-WP_000667305.1;Parent=gene-C9E94_RS18370;Dbxref=GenBank:WP_000667305.1;Name=WP_000667305.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=C9E94_RS18370;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_000667305.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	37139	37471	.	+	.	ID=gene-C9E94_RS18375;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=C9E94_RS18375;old_locus_tag=C9E94_18820
NZ_PYJR01000126.1	Protein Homology	CDS	37139	37471	.	+	0	ID=cds-WP_000007628.1;Parent=gene-C9E94_RS18375;Dbxref=GenBank:WP_000007628.1;Name=WP_000007628.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=C9E94_RS18375;product=preprotein translocase subunit YajC;protein_id=WP_000007628.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	37499	39346	.	+	.	ID=gene-C9E94_RS18380;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=C9E94_RS18380;old_locus_tag=C9E94_18825
NZ_PYJR01000126.1	Protein Homology	CDS	37499	39346	.	+	0	ID=cds-WP_000934811.1;Parent=gene-C9E94_RS18380;Dbxref=GenBank:WP_000934811.1;Name=WP_000934811.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=C9E94_RS18380;product=protein translocase subunit SecD;protein_id=WP_000934811.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	39357	40328	.	+	.	ID=gene-C9E94_RS18385;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=C9E94_RS18385;old_locus_tag=C9E94_18830
NZ_PYJR01000126.1	Protein Homology	CDS	39357	40328	.	+	0	ID=cds-WP_000046629.1;Parent=gene-C9E94_RS18385;Dbxref=GenBank:WP_000046629.1;Name=WP_000046629.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459403.1;locus_tag=C9E94_RS18385;product=protein translocase subunit SecF;protein_id=WP_000046629.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	40473	40838	.	+	.	ID=gene-C9E94_RS18390;Name=C9E94_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18390;old_locus_tag=C9E94_18835
NZ_PYJR01000126.1	Protein Homology	CDS	40473	40838	.	+	0	ID=cds-WP_000793035.1;Parent=gene-C9E94_RS18390;Dbxref=GenBank:WP_000793035.1;Name=WP_000793035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459404.1;locus_tag=C9E94_RS18390;product=VOC family protein;protein_id=WP_000793035.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	40864	41556	.	+	.	ID=gene-C9E94_RS18395;Name=C9E94_RS18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18395;old_locus_tag=C9E94_18840
NZ_PYJR01000126.1	Protein Homology	CDS	40864	41556	.	+	0	ID=cds-WP_023202234.1;Parent=gene-C9E94_RS18395;Dbxref=GenBank:WP_023202234.1;Name=WP_023202234.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459405.1;locus_tag=C9E94_RS18395;product=helix-turn-helix transcriptional regulator;protein_id=WP_023202234.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	41726	42073	.	+	.	ID=gene-C9E94_RS18400;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=C9E94_RS18400;old_locus_tag=C9E94_18845
NZ_PYJR01000126.1	Protein Homology	CDS	41726	42073	.	+	0	ID=cds-WP_000974818.1;Parent=gene-C9E94_RS18400;Dbxref=GenBank:WP_000974818.1;Name=WP_000974818.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459406.1;locus_tag=C9E94_RS18400;product=HNH nuclease YajD;protein_id=WP_000974818.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	42511	42618	.	+	.	ID=gene-C9E94_RS18410;Name=C9E94_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18410
NZ_PYJR01000126.1	Protein Homology	CDS	42511	42618	.	+	0	ID=cds-WP_000176312.1;Parent=gene-C9E94_RS18410;Dbxref=GenBank:WP_000176312.1;Name=WP_000176312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000176312.1;locus_tag=C9E94_RS18410;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000176312.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	42702	43565	.	-	.	ID=gene-C9E94_RS18415;Name=C9E94_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18415;old_locus_tag=C9E94_18860
NZ_PYJR01000126.1	Protein Homology	CDS	42702	43565	.	-	0	ID=cds-WP_000752021.1;Parent=gene-C9E94_RS18415;Dbxref=GenBank:WP_000752021.1;Name=WP_000752021.1;Ontology_term=GO:0015858,GO:0015471,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside-specific channel forming porin activity|0015471||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459408.1;locus_tag=C9E94_RS18415;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_000752021.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	43865	44404	.	-	.	ID=gene-C9E94_RS18420;Name=C9E94_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18420;old_locus_tag=C9E94_18865
NZ_PYJR01000126.1	Protein Homology	CDS	43865	44404	.	-	0	ID=cds-WP_000198484.1;Parent=gene-C9E94_RS18420;Dbxref=GenBank:WP_000198484.1;Name=WP_000198484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459409.1;locus_tag=C9E94_RS18420;product=DUF3251 domain-containing protein;protein_id=WP_000198484.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	44556	45005	.	+	.	ID=gene-C9E94_RS18425;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=C9E94_RS18425;old_locus_tag=C9E94_18870
NZ_PYJR01000126.1	Protein Homology	CDS	44556	45005	.	+	0	ID=cds-WP_000543533.1;Parent=gene-C9E94_RS18425;Dbxref=GenBank:WP_000543533.1;Name=WP_000543533.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=C9E94_RS18425;product=transcriptional regulator NrdR;protein_id=WP_000543533.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	45009	46112	.	+	.	ID=gene-C9E94_RS18430;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=C9E94_RS18430;old_locus_tag=C9E94_18875
NZ_PYJR01000126.1	Protein Homology	CDS	45009	46112	.	+	0	ID=cds-WP_001150216.1;Parent=gene-C9E94_RS18430;Dbxref=GenBank:WP_001150216.1;Name=WP_001150216.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459411.1;locus_tag=C9E94_RS18430;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_001150216.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	46201	46671	.	+	.	ID=gene-C9E94_RS18435;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=C9E94_RS18435;old_locus_tag=C9E94_18880
NZ_PYJR01000126.1	Protein Homology	CDS	46201	46671	.	+	0	ID=cds-WP_001021373.1;Parent=gene-C9E94_RS18435;Dbxref=GenBank:WP_001021373.1;Name=WP_001021373.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=C9E94_RS18435;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021373.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	46692	47111	.	+	.	ID=gene-C9E94_RS18440;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=C9E94_RS18440;old_locus_tag=C9E94_18885
NZ_PYJR01000126.1	Protein Homology	CDS	46692	47111	.	+	0	ID=cds-WP_000801129.1;Parent=gene-C9E94_RS18440;Dbxref=GenBank:WP_000801129.1;Name=WP_000801129.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459413.1;locus_tag=C9E94_RS18440;product=transcription antitermination factor NusB;protein_id=WP_000801129.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	47190	48170	.	+	.	ID=gene-C9E94_RS18445;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=C9E94_RS18445;old_locus_tag=C9E94_18890
NZ_PYJR01000126.1	Protein Homology	CDS	47190	48170	.	+	0	ID=cds-WP_000742082.1;Parent=gene-C9E94_RS18445;Dbxref=GenBank:WP_000742082.1;Name=WP_000742082.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308497.1;locus_tag=C9E94_RS18445;product=thiamine-phosphate kinase;protein_id=WP_000742082.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	48148	48663	.	+	.	ID=gene-C9E94_RS18450;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=C9E94_RS18450;old_locus_tag=C9E94_18895
NZ_PYJR01000126.1	Protein Homology	CDS	48148	48663	.	+	0	ID=cds-WP_001539297.1;Parent=gene-C9E94_RS18450;Dbxref=GenBank:WP_001539297.1;Name=WP_001539297.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459415.1;locus_tag=C9E94_RS18450;product=phosphatidylglycerophosphatase A;protein_id=WP_001539297.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	pseudogene	48668	48759	.	-	.	ID=gene-C9E94_RS23930;Name=C9E94_RS23930;end_range=48759,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23930;partial=true;pseudo=true;start_range=.,48668
NZ_PYJR01000126.1	Protein Homology	CDS	48668	48759	.	-	0	ID=cds-C9E94_RS23930;Parent=gene-C9E94_RS23930;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=48759,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=C9E94_RS23930;partial=true;product=hypothetical protein;pseudo=true;start_range=.,48668;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	48767	49741	.	-	.	ID=gene-C9E94_RS18455;Name=C9E94_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18455;old_locus_tag=C9E94_18900
NZ_PYJR01000126.1	Protein Homology	CDS	48767	49741	.	-	0	ID=cds-WP_001199872.1;Parent=gene-C9E94_RS18455;Dbxref=GenBank:WP_001199872.1;Name=WP_001199872.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459416.1;locus_tag=C9E94_RS18455;product=aldo/keto reductase;protein_id=WP_001199872.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	49771	51660	.	-	.	ID=gene-C9E94_RS18460;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=C9E94_RS18460;old_locus_tag=C9E94_18905
NZ_PYJR01000126.1	Protein Homology	CDS	49771	51660	.	-	0	ID=cds-WP_135401167.1;Parent=gene-C9E94_RS18460;Dbxref=GenBank:WP_135401167.1;Name=WP_135401167.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459417.1;locus_tag=C9E94_RS18460;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_135401167.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	51684	52583	.	-	.	ID=gene-C9E94_RS18465;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=C9E94_RS18465;old_locus_tag=C9E94_18910
NZ_PYJR01000126.1	Protein Homology	CDS	51684	52583	.	-	0	ID=cds-WP_000348074.1;Parent=gene-C9E94_RS18465;Dbxref=GenBank:WP_000348074.1;Name=WP_000348074.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459418.1;locus_tag=C9E94_RS18465;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_000348074.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	52584	52826	.	-	.	ID=gene-C9E94_RS18470;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=C9E94_RS18470;old_locus_tag=C9E94_18915
NZ_PYJR01000126.1	Protein Homology	CDS	52584	52826	.	-	0	ID=cds-WP_001124944.1;Parent=gene-C9E94_RS18470;Dbxref=GenBank:WP_001124944.1;Name=WP_001124944.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459419.1;locus_tag=C9E94_RS18470;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001124944.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	53036	54484	.	+	.	ID=gene-C9E94_RS18475;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=C9E94_RS18475;old_locus_tag=C9E94_18920
NZ_PYJR01000126.1	Protein Homology	CDS	53036	54484	.	+	0	ID=cds-WP_000668650.1;Parent=gene-C9E94_RS18475;Dbxref=GenBank:WP_000668650.1;Name=WP_000668650.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=C9E94_RS18475;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_000668650.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	54528	55325	.	-	.	ID=gene-C9E94_RS18480;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=C9E94_RS18480;old_locus_tag=C9E94_18925
NZ_PYJR01000126.1	Protein Homology	CDS	54528	55325	.	-	0	ID=cds-WP_000909794.1;Parent=gene-C9E94_RS18480;Dbxref=GenBank:WP_000909794.1;Name=WP_000909794.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnV;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459421.1;locus_tag=C9E94_RS18480;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=WP_000909794.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	55319	56188	.	-	.	ID=gene-C9E94_RS18485;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=protein_coding;locus_tag=C9E94_RS18485;old_locus_tag=C9E94_18930
NZ_PYJR01000126.1	Protein Homology	CDS	55319	56188	.	-	0	ID=cds-WP_000052717.1;Parent=gene-C9E94_RS18485;Dbxref=GenBank:WP_000052717.1;Name=WP_000052717.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnU;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052714.1;locus_tag=C9E94_RS18485;product=2-aminoethylphosphonate ABC transporter permease subunit;protein_id=WP_000052717.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	56191	57300	.	-	.	ID=gene-C9E94_RS18490;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=C9E94_RS18490;old_locus_tag=C9E94_18935
NZ_PYJR01000126.1	Protein Homology	CDS	56191	57300	.	-	0	ID=cds-WP_135401168.1;Parent=gene-C9E94_RS18490;Dbxref=GenBank:WP_135401168.1;Name=WP_135401168.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;gene=phnT;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459423.1;locus_tag=C9E94_RS18490;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WP_135401168.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	57306	58319	.	-	.	ID=gene-C9E94_RS18495;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=C9E94_RS18495;old_locus_tag=C9E94_18940
NZ_PYJR01000126.1	Protein Homology	CDS	57306	58319	.	-	0	ID=cds-WP_000778008.1;Parent=gene-C9E94_RS18495;Dbxref=GenBank:WP_000778008.1;Name=WP_000778008.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=phnS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459424.1;locus_tag=C9E94_RS18495;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WP_000778008.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	58517	59236	.	-	.	ID=gene-C9E94_RS18500;Name=phnR;gbkey=Gene;gene=phnR;gene_biotype=protein_coding;locus_tag=C9E94_RS18500;old_locus_tag=C9E94_18945
NZ_PYJR01000126.1	Protein Homology	CDS	58517	59236	.	-	0	ID=cds-WP_023237154.1;Parent=gene-C9E94_RS18500;Dbxref=GenBank:WP_023237154.1;Name=WP_023237154.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=phnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459425.1;locus_tag=C9E94_RS18500;product=phosphonate utilization transcriptional regulator PhnR;protein_id=WP_023237154.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	59376	60479	.	+	.	ID=gene-C9E94_RS18505;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=protein_coding;locus_tag=C9E94_RS18505;old_locus_tag=C9E94_18950
NZ_PYJR01000126.1	Protein Homology	CDS	59376	60479	.	+	0	ID=cds-WP_135401169.1;Parent=gene-C9E94_RS18505;Dbxref=GenBank:WP_135401169.1;Name=WP_135401169.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;gene=phnW;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459426.1;locus_tag=C9E94_RS18505;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_135401169.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	60489	61298	.	+	.	ID=gene-C9E94_RS18510;Name=phnX;gbkey=Gene;gene=phnX;gene_biotype=protein_coding;locus_tag=C9E94_RS18510;old_locus_tag=C9E94_18955
NZ_PYJR01000126.1	Protein Homology	CDS	60489	61298	.	+	0	ID=cds-WP_115409252.1;Parent=gene-C9E94_RS18510;Dbxref=GenBank:WP_115409252.1;Name=WP_115409252.1;Ontology_term=GO:0019700,GO:0050194;gbkey=CDS;gene=phnX;go_function=phosphonoacetaldehyde hydrolase activity|0050194||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229535.1;locus_tag=C9E94_RS18510;product=phosphonoacetaldehyde hydrolase;protein_id=WP_115409252.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	pseudogene	61304	61386	.	+	.	ID=gene-C9E94_RS23935;Name=C9E94_RS23935;end_range=61386,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23935;partial=true;pseudo=true;start_range=.,61304
NZ_PYJR01000126.1	Protein Homology	CDS	61304	61386	.	+	0	ID=cds-C9E94_RS23935;Parent=gene-C9E94_RS23935;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=61386,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=C9E94_RS23935;partial=true;product=hypothetical protein;pseudo=true;start_range=.,61304;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	61395	61985	.	-	.	ID=gene-C9E94_RS18515;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=C9E94_RS18515;old_locus_tag=C9E94_18960
NZ_PYJR01000126.1	Protein Homology	CDS	61395	61985	.	-	0	ID=cds-WP_001275807.1;Parent=gene-C9E94_RS18515;Dbxref=GenBank:WP_001275807.1;Name=WP_001275807.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459428.1;locus_tag=C9E94_RS18515;product=protein deglycase YajL;protein_id=WP_001275807.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	61948	62859	.	-	.	ID=gene-C9E94_RS18520;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=C9E94_RS18520;old_locus_tag=C9E94_18965
NZ_PYJR01000126.1	Protein Homology	CDS	61948	62859	.	-	0	ID=cds-WP_000705816.1;Parent=gene-C9E94_RS18520;Dbxref=GenBank:WP_000705816.1;Name=WP_000705816.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459429.1;locus_tag=C9E94_RS18520;product=2-dehydropantoate 2-reductase;protein_id=WP_000705816.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	62985	63476	.	+	.	ID=gene-C9E94_RS18525;Name=C9E94_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18525;old_locus_tag=C9E94_18970
NZ_PYJR01000126.1	Protein Homology	CDS	62985	63476	.	+	0	ID=cds-WP_001138913.1;Parent=gene-C9E94_RS18525;Dbxref=GenBank:WP_001138913.1;Name=WP_001138913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=C9E94_RS18525;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_001138913.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	63523	64887	.	-	.	ID=gene-C9E94_RS18530;Name=C9E94_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18530;old_locus_tag=C9E94_18975
NZ_PYJR01000126.1	Protein Homology	CDS	63523	64887	.	-	0	ID=cds-WP_001000928.1;Parent=gene-C9E94_RS18530;Dbxref=GenBank:WP_001000928.1;Name=WP_001000928.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507029.1;locus_tag=C9E94_RS18530;product=MFS transporter;protein_id=WP_001000928.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	65412	66923	.	+	.	ID=gene-C9E94_RS18535;Name=C9E94_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18535;old_locus_tag=C9E94_18980
NZ_PYJR01000126.1	Protein Homology	CDS	65412	66923	.	+	0	ID=cds-WP_020437365.1;Parent=gene-C9E94_RS18535;Dbxref=GenBank:WP_020437365.1;Name=WP_020437365.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459433.1;locus_tag=C9E94_RS18535;product=tetratricopeptide repeat protein;protein_id=WP_020437365.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	66935	68428	.	+	.	ID=gene-C9E94_RS18540;Name=C9E94_RS18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18540;old_locus_tag=C9E94_18985
NZ_PYJR01000126.1	Protein Homology	CDS	66935	68428	.	+	0	ID=cds-WP_000595930.1;Parent=gene-C9E94_RS18540;Dbxref=GenBank:WP_000595930.1;Name=WP_000595930.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595936.1;locus_tag=C9E94_RS18540;product=tetratricopeptide repeat protein;protein_id=WP_000595930.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	68510	69400	.	-	.	ID=gene-C9E94_RS18545;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=C9E94_RS18545;old_locus_tag=C9E94_18990
NZ_PYJR01000126.1	Protein Homology	CDS	68510	69400	.	-	0	ID=cds-WP_000971352.1;Parent=gene-C9E94_RS18545;Dbxref=GenBank:WP_000971352.1;Name=WP_000971352.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459435.1;locus_tag=C9E94_RS18545;product=heme o synthase;protein_id=WP_000971352.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	69412	69741	.	-	.	ID=gene-C9E94_RS18550;Name=C9E94_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18550;old_locus_tag=C9E94_18995
NZ_PYJR01000126.1	Protein Homology	CDS	69412	69741	.	-	0	ID=cds-WP_000019878.1;Parent=gene-C9E94_RS18550;Dbxref=GenBank:WP_000019878.1;Name=WP_000019878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459436.1;locus_tag=C9E94_RS18550;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_000019878.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	69741	70355	.	-	.	ID=gene-C9E94_RS18555;Name=C9E94_RS18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18555;old_locus_tag=C9E94_19000
NZ_PYJR01000126.1	Protein Homology	CDS	69741	70355	.	-	0	ID=cds-WP_000179833.1;Parent=gene-C9E94_RS18555;Dbxref=GenBank:WP_000179833.1;Name=WP_000179833.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459437.1;locus_tag=C9E94_RS18555;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_000179833.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	70345	72336	.	-	.	ID=gene-C9E94_RS18560;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=C9E94_RS18560;old_locus_tag=C9E94_19005
NZ_PYJR01000126.1	Protein Homology	CDS	70345	72336	.	-	0	ID=cds-WP_111742426.1;Parent=gene-C9E94_RS18560;Dbxref=GenBank:WP_111742426.1;Name=WP_111742426.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=C9E94_RS18560;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_111742426.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	72347	73303	.	-	.	ID=gene-C9E94_RS18565;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=C9E94_RS18565;old_locus_tag=C9E94_19010
NZ_PYJR01000126.1	Protein Homology	CDS	72347	73303	.	-	0	ID=cds-WP_001239448.1;Parent=gene-C9E94_RS18565;Dbxref=GenBank:WP_001239448.1;Name=WP_001239448.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459439.1;locus_tag=C9E94_RS18565;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_001239448.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	73756	75231	.	-	.	ID=gene-C9E94_RS18570;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=C9E94_RS18570;old_locus_tag=C9E94_19015
NZ_PYJR01000126.1	Protein Homology	CDS	73756	75231	.	-	0	ID=cds-WP_000098473.1;Parent=gene-C9E94_RS18570;Dbxref=GenBank:WP_000098473.1;Name=WP_000098473.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459440.1;locus_tag=C9E94_RS18570;product=muropeptide MFS transporter AmpG;protein_id=WP_000098473.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	75275	75853	.	-	.	ID=gene-C9E94_RS18575;Name=C9E94_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18575;old_locus_tag=C9E94_19020
NZ_PYJR01000126.1	Protein Homology	CDS	75275	75853	.	-	0	ID=cds-WP_001537832.1;Parent=gene-C9E94_RS18575;Dbxref=GenBank:WP_001537832.1;Name=WP_001537832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225436.1;locus_tag=C9E94_RS18575;product=lipoprotein;protein_id=WP_001537832.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	76157	76474	.	+	.	ID=gene-C9E94_RS18580;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=C9E94_RS18580;old_locus_tag=C9E94_19030
NZ_PYJR01000126.1	Protein Homology	CDS	76157	76474	.	+	0	ID=cds-WP_000973433.1;Parent=gene-C9E94_RS18580;Dbxref=GenBank:WP_000973433.1;Name=WP_000973433.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459442.1;locus_tag=C9E94_RS18580;product=transcriptional regulator BolA;protein_id=WP_000973433.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	76821	78119	.	+	.	ID=gene-C9E94_RS18590;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=C9E94_RS18590;old_locus_tag=C9E94_19040
NZ_PYJR01000126.1	Protein Homology	CDS	76821	78119	.	+	0	ID=cds-WP_001198403.1;Parent=gene-C9E94_RS18590;Dbxref=GenBank:WP_001198403.1;Name=WP_001198403.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=C9E94_RS18590;product=trigger factor;protein_id=WP_001198403.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	78366	78989	.	+	.	ID=gene-C9E94_RS18595;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=C9E94_RS18595;old_locus_tag=C9E94_19045
NZ_PYJR01000126.1	Protein Homology	CDS	78366	78989	.	+	0	ID=cds-WP_000122257.1;Parent=gene-C9E94_RS18595;Dbxref=GenBank:WP_000122257.1;Name=WP_000122257.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=C9E94_RS18595;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_000122257.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	79241	80512	.	+	.	ID=gene-C9E94_RS18600;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=C9E94_RS18600;old_locus_tag=C9E94_19050
NZ_PYJR01000126.1	Protein Homology	CDS	79241	80512	.	+	0	ID=cds-WP_000130314.1;Parent=gene-C9E94_RS18600;Dbxref=GenBank:WP_000130314.1;Name=WP_000130314.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=C9E94_RS18600;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_000130314.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	80698	83052	.	+	.	ID=gene-C9E94_RS18605;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=C9E94_RS18605;old_locus_tag=C9E94_19055
NZ_PYJR01000126.1	Protein Homology	CDS	80698	83052	.	+	0	ID=cds-WP_001067723.1;Parent=gene-C9E94_RS18605;Dbxref=GenBank:WP_001067723.1;Name=WP_001067723.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=C9E94_RS18605;product=endopeptidase La;protein_id=WP_001067723.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	83243	83533	.	+	.	ID=gene-C9E94_RS18610;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=C9E94_RS18610;old_locus_tag=C9E94_19060
NZ_PYJR01000126.1	Protein Homology	CDS	83243	83533	.	+	0	ID=cds-WP_254888479.1;Parent=gene-C9E94_RS18610;Dbxref=GenBank:WP_254888479.1;Name=WP_254888479.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=C9E94_RS18610;product=nucleoid-associated protein HU-beta;protein_id=WP_254888479.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	83824	85695	.	+	.	ID=gene-C9E94_RS18615;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=C9E94_RS18615;old_locus_tag=C9E94_19065
NZ_PYJR01000126.1	Protein Homology	CDS	83824	85695	.	+	0	ID=cds-WP_000969434.1;Parent=gene-C9E94_RS18615;Dbxref=GenBank:WP_000969434.1;Name=WP_000969434.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459448.1;locus_tag=C9E94_RS18615;product=peptidylprolyl isomerase;protein_id=WP_000969434.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	85845	86219	.	+	.	ID=gene-C9E94_RS18620;Name=C9E94_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18620;old_locus_tag=C9E94_19070
NZ_PYJR01000126.1	Protein Homology	CDS	85845	86219	.	+	0	ID=cds-WP_000680322.1;Parent=gene-C9E94_RS18620;Dbxref=GenBank:WP_000680322.1;Name=WP_000680322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459449.1;locus_tag=C9E94_RS18620;product=helix-hairpin-helix domain-containing protein;protein_id=WP_000680322.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	86323	86721	.	+	.	ID=gene-C9E94_RS18625;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=C9E94_RS18625;old_locus_tag=C9E94_19075
NZ_PYJR01000126.1	Protein Homology	CDS	86323	86721	.	+	0	ID=cds-WP_001194543.1;Parent=gene-C9E94_RS18625;Dbxref=GenBank:WP_001194543.1;Name=WP_001194543.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459450.1;locus_tag=C9E94_RS18625;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194543.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	86827	87522	.	-	.	ID=gene-C9E94_RS18630;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=C9E94_RS18630;old_locus_tag=C9E94_19080
NZ_PYJR01000126.1	Protein Homology	CDS	86827	87522	.	-	0	ID=cds-WP_000817202.1;Parent=gene-C9E94_RS18630;Dbxref=GenBank:WP_000817202.1;Name=WP_000817202.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459451.1;locus_tag=C9E94_RS18630;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_000817202.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	87587	89287	.	-	.	ID=gene-C9E94_RS18635;Name=C9E94_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18635;old_locus_tag=C9E94_19085
NZ_PYJR01000126.1	Protein Homology	CDS	87587	89287	.	-	0	ID=cds-WP_001238163.1;Parent=gene-C9E94_RS18635;Dbxref=GenBank:WP_001238163.1;Name=WP_001238163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459452.1;locus_tag=C9E94_RS18635;product=SgrR family transcriptional regulator;protein_id=WP_001238163.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	89388	90206	.	+	.	ID=gene-C9E94_RS18640;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=C9E94_RS18640;old_locus_tag=C9E94_19090
NZ_PYJR01000126.1	Protein Homology	CDS	89388	90206	.	+	0	ID=cds-WP_000113030.1;Parent=gene-C9E94_RS18640;Dbxref=GenBank:WP_000113030.1;Name=WP_000113030.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459453.1;locus_tag=C9E94_RS18640;product=HMP-PP phosphatase;protein_id=WP_000113030.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	90256	91311	.	-	.	ID=gene-C9E94_RS18645;Name=cdsH;gbkey=Gene;gene=cdsH;gene_biotype=protein_coding;locus_tag=C9E94_RS18645;old_locus_tag=C9E94_19095
NZ_PYJR01000126.1	Protein Homology	CDS	90256	91311	.	-	0	ID=cds-WP_072208671.1;Parent=gene-C9E94_RS18645;Dbxref=GenBank:WP_072208671.1;Name=WP_072208671.1;gbkey=CDS;gene=cdsH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459454.1;locus_tag=C9E94_RS18645;product=cysteine desulfhydrase;protein_id=WP_072208671.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	91424	91882	.	+	.	ID=gene-C9E94_RS18650;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=C9E94_RS18650;old_locus_tag=C9E94_19100
NZ_PYJR01000126.1	Protein Homology	CDS	91424	91882	.	+	0	ID=cds-WP_000884593.1;Parent=gene-C9E94_RS18650;Dbxref=GenBank:WP_000884593.1;Name=WP_000884593.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459455.1;locus_tag=C9E94_RS18650;product=DNA-binding transcriptional regulator DecR;protein_id=WP_000884593.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	91923	93695	.	+	.	ID=gene-C9E94_RS18655;Name=C9E94_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18655;old_locus_tag=C9E94_19105
NZ_PYJR01000126.1	Protein Homology	CDS	91923	93695	.	+	0	ID=cds-WP_135401170.1;Parent=gene-C9E94_RS18655;Dbxref=GenBank:WP_135401170.1;Name=WP_135401170.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459456.1;locus_tag=C9E94_RS18655;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_135401170.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	93688	95469	.	+	.	ID=gene-C9E94_RS18660;Name=C9E94_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18660;old_locus_tag=C9E94_19110
NZ_PYJR01000126.1	Protein Homology	CDS	93688	95469	.	+	0	ID=cds-WP_001256072.1;Parent=gene-C9E94_RS18660;Dbxref=GenBank:WP_001256072.1;Name=WP_001256072.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459457.1;locus_tag=C9E94_RS18660;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_001256072.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	95682	96020	.	+	.	ID=gene-C9E94_RS18665;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=C9E94_RS18665;old_locus_tag=C9E94_19115
NZ_PYJR01000126.1	Protein Homology	CDS	95682	96020	.	+	0	ID=cds-WP_000780341.1;Parent=gene-C9E94_RS18665;Dbxref=GenBank:WP_000780341.1;Name=WP_000780341.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459458.1;locus_tag=C9E94_RS18665;product=P-II family nitrogen regulator;protein_id=WP_000780341.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	96052	97338	.	+	.	ID=gene-C9E94_RS18670;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=C9E94_RS18670;old_locus_tag=C9E94_19120
NZ_PYJR01000126.1	Protein Homology	CDS	96052	97338	.	+	0	ID=cds-WP_023260097.1;Parent=gene-C9E94_RS18670;Dbxref=GenBank:WP_023260097.1;Name=WP_023260097.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459459.1;locus_tag=C9E94_RS18670;product=ammonium transporter AmtB;protein_id=WP_023260097.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	97438	98298	.	-	.	ID=gene-C9E94_RS18675;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=C9E94_RS18675;old_locus_tag=C9E94_19125
NZ_PYJR01000126.1	Protein Homology	CDS	97438	98298	.	-	0	ID=cds-WP_000084176.1;Parent=gene-C9E94_RS18675;Dbxref=GenBank:WP_000084176.1;Name=WP_000084176.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459460.1;locus_tag=C9E94_RS18675;product=acyl-CoA thioesterase II;protein_id=WP_000084176.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	98513	99082	.	+	.	ID=gene-C9E94_RS18680;Name=C9E94_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18680;old_locus_tag=C9E94_19130
NZ_PYJR01000126.1	Protein Homology	CDS	98513	99082	.	+	0	ID=cds-WP_000779802.1;Parent=gene-C9E94_RS18680;Dbxref=GenBank:WP_000779802.1;Name=WP_000779802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459461.1;locus_tag=C9E94_RS18680;product=YbaY family lipoprotein;protein_id=WP_000779802.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	99115	99504	.	-	.	ID=gene-C9E94_RS18685;Name=C9E94_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18685;old_locus_tag=C9E94_19135
NZ_PYJR01000126.1	Protein Homology	CDS	99115	99504	.	-	0	ID=cds-WP_000961285.1;Parent=gene-C9E94_RS18685;Dbxref=GenBank:WP_000961285.1;Name=WP_000961285.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459462.1;locus_tag=C9E94_RS18685;product=MGMT family protein;protein_id=WP_000961285.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	99589	99685	.	+	.	ID=gene-C9E94_RS18690;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=C9E94_RS18690;old_locus_tag=C9E94_19140
NZ_PYJR01000126.1	cmsearch	SRP_RNA	99589	99685	.	+	.	ID=rna-C9E94_RS18690;Parent=gene-C9E94_RS18690;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS18690;product=signal recognition particle sRNA small type
NZ_PYJR01000126.1	cmsearch	exon	99589	99685	.	+	.	ID=exon-C9E94_RS18690-1;Parent=rna-C9E94_RS18690;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS18690;product=signal recognition particle sRNA small type
NZ_PYJR01000126.1	RefSeq	gene	99735	101285	.	-	.	ID=gene-C9E94_RS18695;Name=C9E94_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18695;old_locus_tag=C9E94_19145
NZ_PYJR01000126.1	Protein Homology	CDS	99735	101285	.	-	0	ID=cds-WP_023182328.1;Parent=gene-C9E94_RS18695;Dbxref=GenBank:WP_023182328.1;Name=WP_023182328.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459463.1;locus_tag=C9E94_RS18695;product=EAL domain-containing protein;protein_id=WP_023182328.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	101510	101770	.	+	.	ID=gene-C9E94_RS18700;Name=C9E94_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18700;old_locus_tag=C9E94_19150
NZ_PYJR01000126.1	Protein Homology	CDS	101510	101770	.	+	0	ID=cds-WP_000801415.1;Parent=gene-C9E94_RS18700;Dbxref=GenBank:WP_000801415.1;Name=WP_000801415.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459464.1;locus_tag=C9E94_RS18700;product=type B 50S ribosomal protein L31;protein_id=WP_000801415.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	101776	101916	.	+	.	ID=gene-C9E94_RS18705;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=C9E94_RS18705;old_locus_tag=C9E94_19155
NZ_PYJR01000126.1	Protein Homology	CDS	101776	101916	.	+	0	ID=cds-WP_001197749.1;Parent=gene-C9E94_RS18705;Dbxref=GenBank:WP_001197749.1;Name=WP_001197749.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459465.1;locus_tag=C9E94_RS18705;product=type B 50S ribosomal protein L36;protein_id=WP_001197749.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	101972	102442	.	-	.	ID=gene-C9E94_RS18710;Name=C9E94_RS18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18710;old_locus_tag=C9E94_19160
NZ_PYJR01000126.1	Protein Homology	CDS	101972	102442	.	-	0	ID=cds-WP_135401171.1;Parent=gene-C9E94_RS18710;Dbxref=GenBank:WP_135401171.1;Name=WP_135401171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459466.1;locus_tag=C9E94_RS18710;product=YlaC family protein;protein_id=WP_135401171.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	102560	103111	.	-	.	ID=gene-C9E94_RS18715;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=C9E94_RS18715;old_locus_tag=C9E94_19165
NZ_PYJR01000126.1	Protein Homology	CDS	102560	103111	.	-	0	ID=cds-WP_001278791.1;Parent=gene-C9E94_RS18715;Dbxref=GenBank:WP_001278791.1;Name=WP_001278791.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459467.1;locus_tag=C9E94_RS18715;product=maltose O-acetyltransferase;protein_id=WP_001278791.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	103290	103508	.	-	.	ID=gene-C9E94_RS18720;Name=C9E94_RS18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18720;old_locus_tag=C9E94_19170
NZ_PYJR01000126.1	Protein Homology	CDS	103290	103508	.	-	0	ID=cds-WP_001280991.1;Parent=gene-C9E94_RS18720;Dbxref=GenBank:WP_001280991.1;Name=WP_001280991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459468.1;locus_tag=C9E94_RS18720;product=HHA domain-containing protein;protein_id=WP_001280991.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	103536	103910	.	-	.	ID=gene-C9E94_RS18725;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=C9E94_RS18725;old_locus_tag=C9E94_19175
NZ_PYJR01000126.1	Protein Homology	CDS	103536	103910	.	-	0	ID=cds-WP_000344807.1;Parent=gene-C9E94_RS18725;Dbxref=GenBank:WP_000344807.1;Name=WP_000344807.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=C9E94_RS18725;product=Hha toxicity modulator TomB;protein_id=WP_000344807.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	104406	107555	.	-	.	ID=gene-C9E94_RS18730;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=C9E94_RS18730;old_locus_tag=C9E94_19180
NZ_PYJR01000126.1	Protein Homology	CDS	104406	107555	.	-	0	ID=cds-WP_001132508.1;Parent=gene-C9E94_RS18730;Dbxref=GenBank:WP_001132508.1;Name=WP_001132508.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=C9E94_RS18730;product=efflux RND transporter permease AcrB;protein_id=WP_001132508.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	107578	108771	.	-	.	ID=gene-C9E94_RS18735;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=C9E94_RS18735;old_locus_tag=C9E94_19185
NZ_PYJR01000126.1	Protein Homology	CDS	107578	108771	.	-	0	ID=cds-WP_001039199.1;Parent=gene-C9E94_RS18735;Dbxref=GenBank:WP_001039199.1;Name=WP_001039199.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459471.1;locus_tag=C9E94_RS18735;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_001039199.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	108913	109566	.	+	.	ID=gene-C9E94_RS18740;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=C9E94_RS18740;old_locus_tag=C9E94_19190
NZ_PYJR01000126.1	Protein Homology	CDS	108913	109566	.	+	0	ID=cds-WP_000101755.1;Parent=gene-C9E94_RS18740;Dbxref=GenBank:WP_000101755.1;Name=WP_000101755.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459472.1;locus_tag=C9E94_RS18740;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_000101755.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	109685	113047	.	+	.	ID=gene-C9E94_RS18745;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=C9E94_RS18745;old_locus_tag=C9E94_19195
NZ_PYJR01000126.1	Protein Homology	CDS	109685	113047	.	+	0	ID=cds-WP_023216294.1;Parent=gene-C9E94_RS18745;Dbxref=GenBank:WP_023216294.1;Name=WP_023216294.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459473.1;locus_tag=C9E94_RS18745;product=mechanosensitive channel MscK;protein_id=WP_023216294.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	113089	114024	.	-	.	ID=gene-C9E94_RS18750;Name=C9E94_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18750;old_locus_tag=C9E94_19200
NZ_PYJR01000126.1	Protein Homology	CDS	113089	114024	.	-	0	ID=cds-WP_000440507.1;Parent=gene-C9E94_RS18750;Dbxref=GenBank:WP_000440507.1;Name=WP_000440507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459474.1;locus_tag=C9E94_RS18750;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000440507.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	114094	114261	.	-	.	ID=gene-C9E94_RS18755;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=C9E94_RS18755;old_locus_tag=C9E94_19205
NZ_PYJR01000126.1	Protein Homology	CDS	114094	114261	.	-	0	ID=cds-WP_000051161.1;Parent=gene-C9E94_RS18755;Dbxref=GenBank:WP_000051161.1;Name=WP_000051161.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459475.1;locus_tag=C9E94_RS18755;product=pleiotropic regulatory protein RsmS;protein_id=WP_000051161.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	114275	114802	.	-	.	ID=gene-C9E94_RS18760;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=C9E94_RS18760;old_locus_tag=C9E94_19210
NZ_PYJR01000126.1	Protein Homology	CDS	114275	114802	.	-	0	ID=cds-WP_001519637.1;Parent=gene-C9E94_RS18760;Dbxref=GenBank:WP_001519637.1;Name=WP_001519637.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001454692.1;locus_tag=C9E94_RS18760;product=primosomal replication protein N'';protein_id=WP_001519637.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	114871	115248	.	+	.	ID=gene-C9E94_RS18765;Name=C9E94_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18765;old_locus_tag=C9E94_19215
NZ_PYJR01000126.1	Protein Homology	CDS	114871	115248	.	+	0	ID=cds-WP_001189860.1;Parent=gene-C9E94_RS18765;Dbxref=GenBank:WP_001189860.1;Name=WP_001189860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459477.1;locus_tag=C9E94_RS18765;product=DUF454 family protein;protein_id=WP_001189860.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	115401	115952	.	+	.	ID=gene-C9E94_RS18770;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=C9E94_RS18770;old_locus_tag=C9E94_19225
NZ_PYJR01000126.1	Protein Homology	CDS	115401	115952	.	+	0	ID=cds-WP_000127350.1;Parent=gene-C9E94_RS18770;Dbxref=GenBank:WP_000127350.1;Name=WP_000127350.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=C9E94_RS18770;product=adenine phosphoribosyltransferase;protein_id=WP_000127350.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	116066	117994	.	+	.	ID=gene-C9E94_RS18775;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=C9E94_RS18775;old_locus_tag=C9E94_19230
NZ_PYJR01000126.1	Protein Homology	CDS	116066	117994	.	+	0	ID=cds-WP_000121967.1;Parent=gene-C9E94_RS18775;Dbxref=GenBank:WP_000121967.1;Name=WP_000121967.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459479.1;locus_tag=C9E94_RS18775;product=DNA polymerase III subunit gamma/tau;protein_id=WP_000121967.1;transl_table=11
NZ_PYJR01000126.1	cmsearch	sequence_feature	117327	117391	.	+	.	ID=id-C9E94_RS18775;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS18775
NZ_PYJR01000126.1	RefSeq	gene	118040	118369	.	+	.	ID=gene-C9E94_RS18780;Name=C9E94_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18780;old_locus_tag=C9E94_19235
NZ_PYJR01000126.1	Protein Homology	CDS	118040	118369	.	+	0	ID=cds-WP_000467098.1;Parent=gene-C9E94_RS18780;Dbxref=GenBank:WP_000467098.1;Name=WP_000467098.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=C9E94_RS18780;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_000467098.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	118369	118974	.	+	.	ID=gene-C9E94_RS18785;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=C9E94_RS18785;old_locus_tag=C9E94_19240
NZ_PYJR01000126.1	Protein Homology	CDS	118369	118974	.	+	0	ID=cds-WP_076741447.1;Parent=gene-C9E94_RS18785;Dbxref=GenBank:WP_076741447.1;Name=WP_076741447.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459481.1;locus_tag=C9E94_RS18785;product=recombination mediator RecR;protein_id=WP_076741447.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	119085	120959	.	+	.	ID=gene-C9E94_RS18790;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=C9E94_RS18790;old_locus_tag=C9E94_19245
NZ_PYJR01000126.1	Protein Homology	CDS	119085	120959	.	+	0	ID=cds-WP_001523272.1;Parent=gene-C9E94_RS18790;Dbxref=GenBank:WP_001523272.1;Name=WP_001523272.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=C9E94_RS18790;product=molecular chaperone HtpG;protein_id=WP_001523272.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	121201	121845	.	+	.	ID=gene-C9E94_RS18795;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=C9E94_RS18795;old_locus_tag=C9E94_19255
NZ_PYJR01000126.1	Protein Homology	CDS	121201	121845	.	+	0	ID=cds-WP_001220237.1;Parent=gene-C9E94_RS18795;Dbxref=GenBank:WP_001220237.1;Name=WP_001220237.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=AMP kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=C9E94_RS18795;product=adenylate kinase;protein_id=WP_001220237.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	122074	123036	.	+	.	ID=gene-C9E94_RS18800;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=C9E94_RS18800;old_locus_tag=C9E94_19260
NZ_PYJR01000126.1	Protein Homology	CDS	122074	123036	.	+	0	ID=cds-WP_001250078.1;Parent=gene-C9E94_RS18800;Dbxref=GenBank:WP_001250078.1;Name=WP_001250078.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459484.1;locus_tag=C9E94_RS18800;product=ferrochelatase;protein_id=WP_001250078.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	123033	124004	.	-	.	ID=gene-C9E94_RS18805;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=C9E94_RS18805;old_locus_tag=C9E94_19265
NZ_PYJR01000126.1	Protein Homology	CDS	123033	124004	.	-	0	ID=cds-WP_000801775.1;Parent=gene-C9E94_RS18805;Dbxref=GenBank:WP_000801775.1;Name=WP_000801775.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459485.1;locus_tag=C9E94_RS18805;product=acetyl esterase;protein_id=WP_000801775.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	124157	125461	.	+	.	ID=gene-C9E94_RS18810;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=C9E94_RS18810;old_locus_tag=C9E94_19270
NZ_PYJR01000126.1	Protein Homology	CDS	124157	125461	.	+	0	ID=cds-WP_000671592.1;Parent=gene-C9E94_RS18810;Dbxref=GenBank:WP_000671592.1;Name=WP_000671592.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459486.1;locus_tag=C9E94_RS18810;product=inosine/guanosine kinase;protein_id=WP_000671592.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	125584	127260	.	-	.	ID=gene-C9E94_RS18820;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=C9E94_RS18820;old_locus_tag=C9E94_19280
NZ_PYJR01000126.1	Protein Homology	CDS	125584	127260	.	-	0	ID=cds-WP_000546209.1;Parent=gene-C9E94_RS18820;Dbxref=GenBank:WP_000546209.1;Name=WP_000546209.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459487.1;locus_tag=C9E94_RS18820;product=YbaL family putative K(+) efflux transporter;protein_id=WP_000546209.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	127475	128695	.	-	.	ID=gene-C9E94_RS18825;Name=C9E94_RS18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18825;old_locus_tag=C9E94_19285
NZ_PYJR01000126.1	Protein Homology	CDS	127475	128695	.	-	0	ID=cds-WP_001251593.1;Parent=gene-C9E94_RS18825;Dbxref=GenBank:WP_001251593.1;Name=WP_001251593.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459488.1;locus_tag=C9E94_RS18825;product=MFS transporter;protein_id=WP_001251593.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	128868	130520	.	+	.	ID=gene-C9E94_RS18830;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=C9E94_RS18830;old_locus_tag=C9E94_19290
NZ_PYJR01000126.1	Protein Homology	CDS	128868	130520	.	+	0	ID=cds-WP_000670399.1;Parent=gene-C9E94_RS18830;Dbxref=GenBank:WP_000670399.1;Name=WP_000670399.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459489.1;locus_tag=C9E94_RS18830;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_000670399.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	130638	131117	.	-	.	ID=gene-C9E94_RS18835;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=C9E94_RS18835;old_locus_tag=C9E94_19295
NZ_PYJR01000126.1	Protein Homology	CDS	130638	131117	.	-	0	ID=cds-WP_000186618.1;Parent=gene-C9E94_RS18835;Dbxref=GenBank:WP_000186618.1;Name=WP_000186618.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=C9E94_RS18835;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186618.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	131319	132113	.	-	.	ID=gene-C9E94_RS18840;Name=C9E94_RS18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18840;old_locus_tag=C9E94_19300
NZ_PYJR01000126.1	Protein Homology	CDS	131319	132113	.	-	0	ID=cds-WP_000421864.1;Parent=gene-C9E94_RS18840;Dbxref=GenBank:WP_000421864.1;Name=WP_000421864.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459491.1;locus_tag=C9E94_RS18840;product=TraB/GumN family protein;protein_id=WP_000421864.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	132199	133026	.	-	.	ID=gene-C9E94_RS18845;Name=C9E94_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18845;old_locus_tag=C9E94_19305
NZ_PYJR01000126.1	Protein Homology	CDS	132199	133026	.	-	0	ID=cds-WP_001577616.1;Parent=gene-C9E94_RS18845;Dbxref=GenBank:WP_001577616.1;Name=WP_001577616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459492.1;locus_tag=C9E94_RS18845;product=lysozyme inhibitor LprI family protein;protein_id=WP_001577616.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	133180	135681	.	-	.	ID=gene-C9E94_RS18850;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=C9E94_RS18850;old_locus_tag=C9E94_19310
NZ_PYJR01000126.1	Protein Homology	CDS	133180	135681	.	-	0	ID=cds-WP_135401172.1;Parent=gene-C9E94_RS18850;Dbxref=GenBank:WP_135401172.1;Name=WP_135401172.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459493.1;locus_tag=C9E94_RS18850;product=copper-exporting P-type ATPase CopA;protein_id=WP_135401172.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	135791	136207	.	+	.	ID=gene-C9E94_RS18855;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=C9E94_RS18855;old_locus_tag=C9E94_19315
NZ_PYJR01000126.1	Protein Homology	CDS	135791	136207	.	+	0	ID=cds-WP_001026760.1;Parent=gene-C9E94_RS18855;Dbxref=GenBank:WP_001026760.1;Name=WP_001026760.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459494.1;locus_tag=C9E94_RS18855;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_001026760.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	136208	136660	.	-	.	ID=gene-C9E94_RS18860;Name=C9E94_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18860;old_locus_tag=C9E94_19320
NZ_PYJR01000126.1	Protein Homology	CDS	136208	136660	.	-	0	ID=cds-WP_000561177.1;Parent=gene-C9E94_RS18860;Dbxref=GenBank:WP_000561177.1;Name=WP_000561177.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459495.1;locus_tag=C9E94_RS18860;product=NfeD family protein;protein_id=WP_000561177.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	136657	137574	.	-	.	ID=gene-C9E94_RS18865;Name=C9E94_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18865;old_locus_tag=C9E94_19325
NZ_PYJR01000126.1	Protein Homology	CDS	136657	137574	.	-	0	ID=cds-WP_000906146.1;Parent=gene-C9E94_RS18865;Dbxref=GenBank:WP_000906146.1;Name=WP_000906146.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459496.1;locus_tag=C9E94_RS18865;product=SPFH domain-containing protein;protein_id=WP_000906146.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	137721	138398	.	+	.	ID=gene-C9E94_RS18870;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=C9E94_RS18870;old_locus_tag=C9E94_19330
NZ_PYJR01000126.1	Protein Homology	CDS	137721	138398	.	+	0	ID=cds-WP_000140192.1;Parent=gene-C9E94_RS18870;Dbxref=GenBank:WP_000140192.1;Name=WP_000140192.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459497.1;locus_tag=C9E94_RS18870;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=WP_000140192.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	138385	139164	.	+	.	ID=gene-C9E94_RS18875;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=C9E94_RS18875;old_locus_tag=C9E94_19335
NZ_PYJR01000126.1	Protein Homology	CDS	138385	139164	.	+	0	ID=cds-WP_001002130.1;Parent=gene-C9E94_RS18875;Dbxref=GenBank:WP_001002130.1;Name=WP_001002130.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459498.1;locus_tag=C9E94_RS18875;product=iron efflux ABC transporter permease subunit FetB;protein_id=WP_001002130.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	139245	140099	.	-	.	ID=gene-C9E94_RS18880;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=C9E94_RS18880;old_locus_tag=C9E94_19340
NZ_PYJR01000126.1	Protein Homology	CDS	139245	140099	.	-	0	ID=cds-WP_000116055.1;Parent=gene-C9E94_RS18880;Dbxref=GenBank:WP_000116055.1;Name=WP_000116055.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459499.1;locus_tag=C9E94_RS18880;product=chaperedoxin;protein_id=WP_000116055.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	140159	140929	.	-	.	ID=gene-C9E94_RS18885;Name=C9E94_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18885;old_locus_tag=C9E94_19345
NZ_PYJR01000126.1	Protein Homology	CDS	140159	140929	.	-	0	ID=cds-WP_001172806.1;Parent=gene-C9E94_RS18885;Dbxref=GenBank:WP_001172806.1;Name=WP_001172806.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459500.1;locus_tag=C9E94_RS18885;product=SDR family oxidoreductase;protein_id=WP_001172806.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	141084	141698	.	-	.	ID=gene-C9E94_RS18890;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=C9E94_RS18890;old_locus_tag=C9E94_19350
NZ_PYJR01000126.1	Protein Homology	CDS	141084	141698	.	-	0	ID=cds-WP_001010574.1;Parent=gene-C9E94_RS18890;Dbxref=GenBank:WP_001010574.1;Name=WP_001010574.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459501.1;locus_tag=C9E94_RS18890;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_001010574.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	141669	142355	.	+	.	ID=gene-C9E94_RS18895;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=C9E94_RS18895;old_locus_tag=C9E94_19355
NZ_PYJR01000126.1	Protein Homology	CDS	141669	142355	.	+	0	ID=cds-WP_001110598.1;Parent=gene-C9E94_RS18895;Dbxref=GenBank:WP_001110598.1;Name=WP_001110598.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459502.1;locus_tag=C9E94_RS18895;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_001110598.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	142352	144766	.	+	.	ID=gene-C9E94_RS18900;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=C9E94_RS18900;old_locus_tag=C9E94_19360
NZ_PYJR01000126.1	Protein Homology	CDS	142352	144766	.	+	0	ID=cds-WP_080217831.1;Parent=gene-C9E94_RS18900;Dbxref=GenBank:WP_080217831.1;Name=WP_080217831.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=C9E94_RS18900;product=putative ABC transporter permease subunit YbbP;protein_id=WP_080217831.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	144952	146085	.	+	.	ID=gene-C9E94_RS18905;Name=C9E94_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18905;old_locus_tag=C9E94_19365
NZ_PYJR01000126.1	Protein Homology	CDS	144952	146085	.	+	0	ID=cds-WP_000152869.1;Parent=gene-C9E94_RS18905;Dbxref=GenBank:WP_000152869.1;Name=WP_000152869.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459504.1;locus_tag=C9E94_RS18905;product=porin;protein_id=WP_000152869.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	146342	147172	.	+	.	ID=gene-C9E94_RS18910;Name=C9E94_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18910;old_locus_tag=C9E94_19370
NZ_PYJR01000126.1	Protein Homology	CDS	146342	147172	.	+	0	ID=cds-WP_000524315.1;Parent=gene-C9E94_RS18910;Dbxref=GenBank:WP_000524315.1;Name=WP_000524315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459505.1;locus_tag=C9E94_RS18910;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_000524315.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	147209	148225	.	+	.	ID=gene-C9E94_RS18915;Name=sfbB;gbkey=Gene;gene=sfbB;gene_biotype=protein_coding;locus_tag=C9E94_RS18915;old_locus_tag=C9E94_19375
NZ_PYJR01000126.1	Protein Homology	CDS	147209	148225	.	+	0	ID=cds-WP_135401173.1;Parent=gene-C9E94_RS18915;Dbxref=GenBank:WP_135401173.1;Name=WP_135401173.1;gbkey=CDS;gene=sfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459506.1;locus_tag=C9E94_RS18915;product=virulence-associated ABC transporter ATP-binding protein SfbB;protein_id=WP_135401173.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	148218	148877	.	+	.	ID=gene-C9E94_RS18920;Name=C9E94_RS18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18920;old_locus_tag=C9E94_19380
NZ_PYJR01000126.1	Protein Homology	CDS	148218	148877	.	+	0	ID=cds-WP_000342247.1;Parent=gene-C9E94_RS18920;Dbxref=GenBank:WP_000342247.1;Name=WP_000342247.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459507.1;locus_tag=C9E94_RS18920;product=methionine ABC transporter permease;protein_id=WP_000342247.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	148906	150000	.	-	.	ID=gene-C9E94_RS18925;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=C9E94_RS18925;old_locus_tag=C9E94_19385
NZ_PYJR01000126.1	Protein Homology	CDS	148906	150000	.	-	0	ID=cds-WP_001154077.1;Parent=gene-C9E94_RS18925;Dbxref=GenBank:WP_001154077.1;Name=WP_001154077.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459508.1;locus_tag=C9E94_RS18925;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_001154077.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	150070	150996	.	-	.	ID=gene-C9E94_RS18930;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;locus_tag=C9E94_RS18930;old_locus_tag=C9E94_19390
NZ_PYJR01000126.1	Protein Homology	CDS	150070	150996	.	-	0	ID=cds-WP_000460169.1;Parent=gene-C9E94_RS18930;Dbxref=GenBank:WP_000460169.1;Name=WP_000460169.1;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459509.1;locus_tag=C9E94_RS18930;product=HTH-type transcriptional activator AllS;protein_id=WP_000460169.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	151223	151705	.	+	.	ID=gene-C9E94_RS18935;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=C9E94_RS18935;old_locus_tag=C9E94_19395
NZ_PYJR01000126.1	Protein Homology	CDS	151223	151705	.	+	0	ID=cds-WP_000764659.1;Parent=gene-C9E94_RS18935;Dbxref=GenBank:WP_000764659.1;Name=WP_000764659.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459510.1;locus_tag=C9E94_RS18935;product=ureidoglycolate lyase;protein_id=WP_000764659.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	151784	152602	.	+	.	ID=gene-C9E94_RS18940;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=C9E94_RS18940;old_locus_tag=C9E94_19400
NZ_PYJR01000126.1	Protein Homology	CDS	151784	152602	.	+	0	ID=cds-WP_000141265.1;Parent=gene-C9E94_RS18940;Dbxref=GenBank:WP_000141265.1;Name=WP_000141265.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459511.1;locus_tag=C9E94_RS18940;product=HTH-type transcriptional repressor AllR;protein_id=WP_000141265.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	152687	154468	.	+	.	ID=gene-C9E94_RS18945;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=C9E94_RS18945;old_locus_tag=C9E94_19405
NZ_PYJR01000126.1	Protein Homology	CDS	152687	154468	.	+	0	ID=cds-WP_135401174.1;Parent=gene-C9E94_RS18945;Dbxref=GenBank:WP_135401174.1;Name=WP_135401174.1;Ontology_term=GO:0009436,GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;go_process=glyoxylate catabolic process|0009436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459512.1;locus_tag=C9E94_RS18945;product=glyoxylate carboligase;protein_id=WP_135401174.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	154481	155257	.	+	.	ID=gene-C9E94_RS18950;Name=gip;gbkey=Gene;gene=gip;gene_biotype=protein_coding;locus_tag=C9E94_RS18950;old_locus_tag=C9E94_19410
NZ_PYJR01000126.1	Protein Homology	CDS	154481	155257	.	+	0	ID=cds-WP_000943591.1;Parent=gene-C9E94_RS18950;Dbxref=GenBank:WP_000943591.1;Name=WP_000943591.1;gbkey=CDS;gene=gip;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459513.1;locus_tag=C9E94_RS18950;product=hydroxypyruvate isomerase Gip;protein_id=WP_000943591.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	155359	156237	.	+	.	ID=gene-C9E94_RS18955;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=C9E94_RS18955;old_locus_tag=C9E94_19415
NZ_PYJR01000126.1	Protein Homology	CDS	155359	156237	.	+	0	ID=cds-WP_000765815.1;Parent=gene-C9E94_RS18955;Dbxref=GenBank:WP_000765815.1;Name=WP_000765815.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459514.1;locus_tag=C9E94_RS18955;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000765815.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	156303	157550	.	+	.	ID=gene-C9E94_RS18960;Name=C9E94_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18960;old_locus_tag=C9E94_19420
NZ_PYJR01000126.1	Protein Homology	CDS	156303	157550	.	+	0	ID=cds-WP_000005070.1;Parent=gene-C9E94_RS18960;Dbxref=GenBank:WP_000005070.1;Name=WP_000005070.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459515.1;locus_tag=C9E94_RS18960;product=MFS transporter;protein_id=WP_000005070.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	157646	159100	.	+	.	ID=gene-C9E94_RS18965;Name=C9E94_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18965;old_locus_tag=C9E94_19425
NZ_PYJR01000126.1	Protein Homology	CDS	157646	159100	.	+	0	ID=cds-WP_135401175.1;Parent=gene-C9E94_RS18965;Dbxref=GenBank:WP_135401175.1;Name=WP_135401175.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=C9E94_RS18965;product=allantoin transporter;protein_id=WP_135401175.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	159179	160540	.	+	.	ID=gene-C9E94_RS18970;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=C9E94_RS18970;old_locus_tag=C9E94_19430
NZ_PYJR01000126.1	Protein Homology	CDS	159179	160540	.	+	0	ID=cds-WP_000006865.1;Parent=gene-C9E94_RS18970;Dbxref=GenBank:WP_000006865.1;Name=WP_000006865.1;Ontology_term=GO:0000256,GO:0004038;gbkey=CDS;gene=allB;go_function=allantoinase activity|0004038||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459518.1;locus_tag=C9E94_RS18970;product=allantoinase AllB;protein_id=WP_000006865.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	160599	161897	.	+	.	ID=gene-C9E94_RS18975;Name=C9E94_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18975;old_locus_tag=C9E94_19435
NZ_PYJR01000126.1	Protein Homology	CDS	160599	161897	.	+	0	ID=cds-WP_000484505.1;Parent=gene-C9E94_RS18975;Dbxref=GenBank:WP_000484505.1;Name=WP_000484505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459519.1;locus_tag=C9E94_RS18975;product=uracil/xanthine transporter;protein_id=WP_000484505.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	161920	163068	.	+	.	ID=gene-C9E94_RS18980;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=C9E94_RS18980;old_locus_tag=C9E94_19440
NZ_PYJR01000126.1	Protein Homology	CDS	161920	163068	.	+	0	ID=cds-WP_135401184.1;Parent=gene-C9E94_RS18980;Dbxref=GenBank:WP_135401184.1;Name=WP_135401184.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459520.1;locus_tag=C9E94_RS18980;product=glycerate 3-kinase;protein_id=WP_135401184.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	163148	163933	.	-	.	ID=gene-C9E94_RS18985;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=C9E94_RS18985;old_locus_tag=C9E94_19445
NZ_PYJR01000126.1	Protein Homology	CDS	163148	163933	.	-	0	ID=cds-WP_000540985.1;Parent=gene-C9E94_RS18985;Dbxref=GenBank:WP_000540985.1;Name=WP_000540985.1;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459521.1;locus_tag=C9E94_RS18985;product=(S)-ureidoglycine aminohydrolase;protein_id=WP_000540985.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	163944	165179	.	-	.	ID=gene-C9E94_RS18990;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=C9E94_RS18990;old_locus_tag=C9E94_19450
NZ_PYJR01000126.1	Protein Homology	CDS	163944	165179	.	-	0	ID=cds-WP_135401176.1;Parent=gene-C9E94_RS18990;Dbxref=GenBank:WP_135401176.1;Name=WP_135401176.1;Ontology_term=GO:0000256,GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA,allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459522.1;locus_tag=C9E94_RS18990;product=allantoate deiminase;protein_id=WP_135401176.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	165201	166250	.	-	.	ID=gene-C9E94_RS18995;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=C9E94_RS18995;old_locus_tag=C9E94_19455
NZ_PYJR01000126.1	Protein Homology	CDS	165201	166250	.	-	0	ID=cds-WP_000703937.1;Parent=gene-C9E94_RS18995;Dbxref=GenBank:WP_000703937.1;Name=WP_000703937.1;gbkey=CDS;gene=allD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459523.1;locus_tag=C9E94_RS18995;product=ureidoglycolate dehydrogenase AllD;protein_id=WP_000703937.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	166566	168230	.	+	.	ID=gene-C9E94_RS19000;Name=C9E94_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19000;old_locus_tag=C9E94_19460
NZ_PYJR01000126.1	Protein Homology	CDS	166566	168230	.	+	0	ID=cds-WP_135401177.1;Parent=gene-C9E94_RS19000;Dbxref=GenBank:WP_135401177.1;Name=WP_135401177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459524.1;locus_tag=C9E94_RS19000;product=acyl-CoA synthetase FdrA;protein_id=WP_135401177.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	168240	169499	.	+	.	ID=gene-C9E94_RS19005;Name=C9E94_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19005;old_locus_tag=C9E94_19465
NZ_PYJR01000126.1	Protein Homology	CDS	168240	169499	.	+	0	ID=cds-WP_000495330.1;Parent=gene-C9E94_RS19005;Dbxref=GenBank:WP_000495330.1;Name=WP_000495330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459525.1;locus_tag=C9E94_RS19005;product=DUF1116 domain-containing protein;protein_id=WP_000495330.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	169511	170320	.	+	.	ID=gene-C9E94_RS19010;Name=C9E94_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19010;old_locus_tag=C9E94_19470
NZ_PYJR01000126.1	Protein Homology	CDS	169511	170320	.	+	0	ID=cds-WP_000821191.1;Parent=gene-C9E94_RS19010;Dbxref=GenBank:WP_000821191.1;Name=WP_000821191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459526.1;locus_tag=C9E94_RS19010;product=DUF2877 domain-containing protein;protein_id=WP_000821191.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	170324	171217	.	+	.	ID=gene-C9E94_RS19015;Name=C9E94_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19015;old_locus_tag=C9E94_19475
NZ_PYJR01000126.1	Protein Homology	CDS	170324	171217	.	+	0	ID=cds-WP_000855342.1;Parent=gene-C9E94_RS19015;Dbxref=GenBank:WP_000855342.1;Name=WP_000855342.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459527.1;locus_tag=C9E94_RS19015;product=carbamate kinase;protein_id=WP_000855342.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	171258	172325	.	-	.	ID=gene-C9E94_RS19020;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=C9E94_RS19020;old_locus_tag=C9E94_19480
NZ_PYJR01000126.1	Protein Homology	CDS	171258	172325	.	-	0	ID=cds-WP_080197567.1;Parent=gene-C9E94_RS19020;Dbxref=GenBank:WP_080197567.1;Name=WP_080197567.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459528.1;locus_tag=C9E94_RS19020;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_080197567.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	172322	172831	.	-	.	ID=gene-C9E94_RS19025;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=C9E94_RS19025;old_locus_tag=C9E94_19485
NZ_PYJR01000126.1	Protein Homology	CDS	172322	172831	.	-	0	ID=cds-WP_000098736.1;Parent=gene-C9E94_RS19025;Dbxref=GenBank:WP_000098736.1;Name=WP_000098736.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459529.1;locus_tag=C9E94_RS19025;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_000098736.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	172949	173671	.	-	.	ID=gene-C9E94_RS19030;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=C9E94_RS19030;old_locus_tag=C9E94_19495
NZ_PYJR01000126.1	Protein Homology	CDS	172949	173671	.	-	0	ID=cds-WP_000212285.1;Parent=gene-C9E94_RS19030;Dbxref=GenBank:WP_000212285.1;Name=WP_000212285.1;Ontology_term=GO:0009245,GO:0008758,GO:0016462,GO:0005737;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||IEA;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459530.1;locus_tag=C9E94_RS19030;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_000212285.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	173674	174168	.	-	.	ID=gene-C9E94_RS19035;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=C9E94_RS19035;old_locus_tag=C9E94_19500
NZ_PYJR01000126.1	Protein Homology	CDS	173674	174168	.	-	0	ID=cds-WP_000255991.1;Parent=gene-C9E94_RS19035;Dbxref=GenBank:WP_000255991.1;Name=WP_000255991.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=C9E94_RS19035;product=peptidylprolyl isomerase B;protein_id=WP_000255991.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	174341	175726	.	+	.	ID=gene-C9E94_RS19040;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=C9E94_RS19040;old_locus_tag=C9E94_19505
NZ_PYJR01000126.1	Protein Homology	CDS	174341	175726	.	+	0	ID=cds-WP_135401178.1;Parent=gene-C9E94_RS19040;Dbxref=GenBank:WP_135401178.1;Name=WP_135401178.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=C9E94_RS19040;product=cysteine--tRNA ligase;protein_id=WP_135401178.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	175771	176595	.	-	.	ID=gene-C9E94_RS19045;Name=C9E94_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19045;old_locus_tag=C9E94_19510
NZ_PYJR01000126.1	Protein Homology	CDS	175771	176595	.	-	0	ID=cds-WP_000819118.1;Parent=gene-C9E94_RS19045;Dbxref=GenBank:WP_000819118.1;Name=WP_000819118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459533.1;locus_tag=C9E94_RS19045;product=DUF2145 domain-containing protein;protein_id=WP_000819118.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	176592	177029	.	-	.	ID=gene-C9E94_RS19050;Name=C9E94_RS19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19050;old_locus_tag=C9E94_19515
NZ_PYJR01000126.1	Protein Homology	CDS	176592	177029	.	-	0	ID=cds-WP_135401179.1;Parent=gene-C9E94_RS19050;Dbxref=GenBank:WP_135401179.1;Name=WP_135401179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459534.1;locus_tag=C9E94_RS19050;product=STM0539 family protein;protein_id=WP_135401179.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	177022	177567	.	-	.	ID=gene-C9E94_RS19055;Name=C9E94_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19055;old_locus_tag=C9E94_19520
NZ_PYJR01000126.1	Protein Homology	CDS	177022	177567	.	-	0	ID=cds-WP_001143571.1;Parent=gene-C9E94_RS19055;Dbxref=GenBank:WP_001143571.1;Name=WP_001143571.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459535.1;locus_tag=C9E94_RS19055;product=metal-dependent hydrolase;protein_id=WP_001143571.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	177695	177907	.	-	.	ID=gene-C9E94_RS19060;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=C9E94_RS19060;old_locus_tag=C9E94_19525
NZ_PYJR01000126.1	Protein Homology	CDS	177695	177907	.	-	0	ID=cds-WP_000190278.1;Parent=gene-C9E94_RS19060;Dbxref=GenBank:WP_000190278.1;Name=WP_000190278.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459536.1;locus_tag=C9E94_RS19060;product=ribosome-associated protein YbcJ;protein_id=WP_000190278.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	177909	178775	.	-	.	ID=gene-C9E94_RS19065;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=C9E94_RS19065;old_locus_tag=C9E94_19530
NZ_PYJR01000126.1	Protein Homology	CDS	177909	178775	.	-	0	ID=cds-WP_000729165.1;Parent=gene-C9E94_RS19065;Dbxref=GenBank:WP_000729165.1;Name=WP_000729165.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459537.1;locus_tag=C9E94_RS19065;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_000729165.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	179322	179879	.	+	.	ID=gene-C9E94_RS19075;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=C9E94_RS19075;old_locus_tag=C9E94_19540
NZ_PYJR01000126.1	Protein Homology	CDS	179322	179879	.	+	0	ID=cds-WP_000681026.1;Parent=gene-C9E94_RS19075;Dbxref=GenBank:WP_000681026.1;Name=WP_000681026.1;gbkey=CDS;gene=fimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459538.3;locus_tag=C9E94_RS19075;product=type 1 fimbrial protein subunit FimA;protein_id=WP_000681026.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	179954	180487	.	+	.	ID=gene-C9E94_RS19080;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=C9E94_RS19080;old_locus_tag=C9E94_19545
NZ_PYJR01000126.1	Protein Homology	CDS	179954	180487	.	+	0	ID=cds-WP_000619614.1;Parent=gene-C9E94_RS19080;Dbxref=GenBank:WP_000619614.1;Name=WP_000619614.1;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459539.1;locus_tag=C9E94_RS19080;product=type 1 fimbrial protein subunit FimI;protein_id=WP_000619614.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	180531	181223	.	+	.	ID=gene-C9E94_RS19085;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=C9E94_RS19085;old_locus_tag=C9E94_19550
NZ_PYJR01000126.1	Protein Homology	CDS	180531	181223	.	+	0	ID=cds-WP_001519112.1;Parent=gene-C9E94_RS19085;Dbxref=GenBank:WP_001519112.1;Name=WP_001519112.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459540.1;locus_tag=C9E94_RS19085;product=type 1 fimbria chaperone FimC;protein_id=WP_001519112.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	181254	183866	.	+	.	ID=gene-C9E94_RS19090;Name=C9E94_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19090;old_locus_tag=C9E94_19555
NZ_PYJR01000126.1	Protein Homology	CDS	181254	183866	.	+	0	ID=cds-WP_135401180.1;Parent=gene-C9E94_RS19090;Dbxref=GenBank:WP_135401180.1;Name=WP_135401180.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459541.1;locus_tag=C9E94_RS19090;product=fimbrial biogenesis usher protein;protein_id=WP_135401180.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	183881	184888	.	+	.	ID=gene-C9E94_RS19095;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=C9E94_RS19095;old_locus_tag=C9E94_19560
NZ_PYJR01000126.1	Protein Homology	CDS	183881	184888	.	+	0	ID=cds-WP_023260305.1;Parent=gene-C9E94_RS19095;Dbxref=GenBank:WP_023260305.1;Name=WP_023260305.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459542.1;locus_tag=C9E94_RS19095;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_023260305.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	184898	185416	.	+	.	ID=gene-C9E94_RS19100;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=C9E94_RS19100;old_locus_tag=C9E94_19565
NZ_PYJR01000126.1	Protein Homology	CDS	184898	185416	.	+	0	ID=cds-WP_000603405.1;Parent=gene-C9E94_RS19100;Dbxref=GenBank:WP_000603405.1;Name=WP_000603405.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459543.1;locus_tag=C9E94_RS19100;product=fimbria assembly protein;protein_id=WP_000603405.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	185462	186094	.	-	.	ID=gene-C9E94_RS19105;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=C9E94_RS19105;old_locus_tag=C9E94_19570
NZ_PYJR01000126.1	Protein Homology	CDS	185462	186094	.	-	0	ID=cds-WP_000801273.1;Parent=gene-C9E94_RS19105;Dbxref=GenBank:WP_000801273.1;Name=WP_000801273.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459544.1;locus_tag=C9E94_RS19105;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WP_000801273.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	186698	187420	.	-	.	ID=gene-C9E94_RS19110;Name=fimY;gbkey=Gene;gene=fimY;gene_biotype=protein_coding;locus_tag=C9E94_RS19110;old_locus_tag=C9E94_19575
NZ_PYJR01000126.1	Protein Homology	CDS	186698	187420	.	-	0	ID=cds-WP_001258123.1;Parent=gene-C9E94_RS19110;Dbxref=GenBank:WP_001258123.1;Name=WP_001258123.1;gbkey=CDS;gene=fimY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459545.1;locus_tag=C9E94_RS19110;product=fimbria biosynthesis regulator FimY;protein_id=WP_001258123.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	187439	187750	.	-	.	ID=gene-C9E94_RS19115;Name=C9E94_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19115;old_locus_tag=C9E94_19580
NZ_PYJR01000126.1	Protein Homology	CDS	187439	187750	.	-	0	ID=cds-WP_135401181.1;Parent=gene-C9E94_RS19115;Dbxref=GenBank:WP_135401181.1;Name=WP_135401181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459546.1;locus_tag=C9E94_RS19115;product=diguanylate cyclase;protein_id=WP_135401181.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	187912	188508	.	-	.	ID=gene-C9E94_RS19120;Name=fimW;gbkey=Gene;gene=fimW;gene_biotype=protein_coding;locus_tag=C9E94_RS19120;old_locus_tag=C9E94_19585
NZ_PYJR01000126.1	Protein Homology	CDS	187912	188508	.	-	0	ID=cds-WP_000948629.1;Parent=gene-C9E94_RS19120;Dbxref=GenBank:WP_000948629.1;Name=WP_000948629.1;gbkey=CDS;gene=fimW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459547.1;locus_tag=C9E94_RS19120;product=fimbria biosynthesis transcriptional regulator FimW;protein_id=WP_000948629.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	188763	188839	.	+	.	ID=gene-C9E94_RS19130;Name=C9E94_RS19130;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS19130;old_locus_tag=C9E94_19595
NZ_PYJR01000126.1	tRNAscan-SE	tRNA	188763	188839	.	+	.	ID=rna-C9E94_RS19130;Parent=gene-C9E94_RS19130;anticodon=(pos:188797..188799);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS19130;product=tRNA-Arg
NZ_PYJR01000126.1	tRNAscan-SE	exon	188763	188839	.	+	.	ID=exon-C9E94_RS19130-1;Parent=rna-C9E94_RS19130;anticodon=(pos:188797..188799);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS19130;product=tRNA-Arg
NZ_PYJR01000126.1	RefSeq	pseudogene	188866	188964	.	-	.	ID=gene-C9E94_RS23695;Name=C9E94_RS23695;end_range=188964,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23695;partial=true;pseudo=true
NZ_PYJR01000126.1	Protein Homology	CDS	188866	188964	.	-	0	ID=cds-C9E94_RS23695;Parent=gene-C9E94_RS23695;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=188964,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415069.1;locus_tag=C9E94_RS23695;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYJR01000126.1	RefSeq	pseudogene	188933	189311	.	-	.	ID=gene-C9E94_RS23700;Name=C9E94_RS23700;end_range=189311,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23700;partial=true;pseudo=true
NZ_PYJR01000126.1	Protein Homology	CDS	188933	189311	.	-	0	ID=cds-C9E94_RS23700;Parent=gene-C9E94_RS23700;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=189311,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612006.1;locus_tag=C9E94_RS23700;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11
NZ_PYJR01000126.1	RefSeq	pseudogene	189344	189600	.	-	.	ID=gene-C9E94_RS23705;Name=C9E94_RS23705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23705;partial=true;pseudo=true;start_range=.,189344
NZ_PYJR01000126.1	Protein Homology	CDS	189344	189600	.	-	0	ID=cds-C9E94_RS23705;Parent=gene-C9E94_RS23705;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_196249857.1;locus_tag=C9E94_RS23705;partial=true;product=transposase;pseudo=true;start_range=.,189344;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	189653	189973	.	+	.	ID=gene-C9E94_RS19140;Name=C9E94_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19140;old_locus_tag=C9E94_19605
NZ_PYJR01000126.1	GeneMarkS-2+	CDS	189653	189973	.	+	0	ID=cds-WP_135401182.1;Parent=gene-C9E94_RS19140;Dbxref=GenBank:WP_135401182.1;Name=WP_135401182.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS19140;product=hypothetical protein;protein_id=WP_135401182.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	gene	190105	191766	.	-	.	ID=gene-C9E94_RS19145;Name=C9E94_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19145
NZ_PYJR01000126.1	Protein Homology	CDS	190105	191766	.	-	0	ID=cds-WP_135401183.1;Parent=gene-C9E94_RS19145;Dbxref=GenBank:WP_135401183.1;Name=WP_135401183.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039639.5;locus_tag=C9E94_RS19145;product=DUF6056 family protein;protein_id=WP_135401183.1;transl_table=11
NZ_PYJR01000126.1	RefSeq	pseudogene	191763	192262	.	-	.	ID=gene-C9E94_RS19150;Name=C9E94_RS19150;end_range=192262,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS19150;old_locus_tag=C9E94_19625;partial=true;pseudo=true
NZ_PYJR01000126.1	Protein Homology	CDS	191763	192262	.	-	2	ID=cds-C9E94_RS19150;Parent=gene-C9E94_RS19150;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=192262,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000703609.1;locus_tag=C9E94_RS19150;partial=true;product=glycosyltransferase;pseudo=true;transl_table=11
##sequence-region NZ_PYJR01000008.1 1 52794
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000008.1	RefSeq	region	1	52794	.	+	.	ID=NZ_PYJR01000008.1:1..52794;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000008.1	RefSeq	gene	144	1544	.	-	.	ID=gene-C9E94_RS00595;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=C9E94_RS00595;old_locus_tag=C9E94_00605
NZ_PYJR01000008.1	Protein Homology	CDS	144	1544	.	-	0	ID=cds-WP_000117870.1;Parent=gene-C9E94_RS00595;Dbxref=GenBank:WP_000117870.1;Name=WP_000117870.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=C9E94_RS00595;product=asparagine--tRNA ligase;protein_id=WP_000117870.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	1745	2206	.	-	.	ID=gene-C9E94_RS00600;Name=C9E94_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00600;old_locus_tag=C9E94_00610
NZ_PYJR01000008.1	Protein Homology	CDS	1745	2206	.	-	0	ID=cds-WP_000762343.1;Parent=gene-C9E94_RS00600;Dbxref=GenBank:WP_000762343.1;Name=WP_000762343.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459976.1;locus_tag=C9E94_RS00600;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_000762343.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	2523	3737	.	+	.	ID=gene-C9E94_RS00610;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=C9E94_RS00610;old_locus_tag=C9E94_00620
NZ_PYJR01000008.1	Protein Homology	CDS	2523	3737	.	+	0	ID=cds-WP_135400735.1;Parent=gene-C9E94_RS00610;Dbxref=GenBank:WP_135400735.1;Name=WP_135400735.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459977.1;locus_tag=C9E94_RS00610;product=diaminopropionate ammonia-lyase;protein_id=WP_135400735.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	3984	5420	.	+	.	ID=gene-C9E94_RS00615;Name=C9E94_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00615;old_locus_tag=C9E94_00625
NZ_PYJR01000008.1	Protein Homology	CDS	3984	5420	.	+	0	ID=cds-WP_000893200.1;Parent=gene-C9E94_RS00615;Dbxref=GenBank:WP_000893200.1;Name=WP_000893200.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459978.1;locus_tag=C9E94_RS00615;product=alanine/glycine:cation symporter family protein;protein_id=WP_000893200.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	5498	6700	.	-	.	ID=gene-C9E94_RS00620;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=C9E94_RS00620;old_locus_tag=C9E94_00630
NZ_PYJR01000008.1	Protein Homology	CDS	5498	6700	.	-	0	ID=cds-WP_135400736.1;Parent=gene-C9E94_RS00620;Dbxref=GenBank:WP_135400736.1;Name=WP_135400736.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459979.1;locus_tag=C9E94_RS00620;product=nicotinate phosphoribosyltransferase;protein_id=WP_135400736.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	6895	8187	.	-	.	ID=gene-C9E94_RS00625;Name=int;gbkey=Gene;gene=int;gene_biotype=protein_coding;locus_tag=C9E94_RS00625;old_locus_tag=C9E94_00635
NZ_PYJR01000008.1	Protein Homology	CDS	6895	8187	.	-	0	ID=cds-WP_001262307.1;Parent=gene-C9E94_RS00625;Dbxref=GenBank:WP_001262307.1;Name=WP_001262307.1;gbkey=CDS;gene=int;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459980.1;locus_tag=C9E94_RS00625;product=FimB-specific integrase Int;protein_id=WP_001262307.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	8232	8480	.	-	.	ID=gene-C9E94_RS00630;Name=xis;gbkey=Gene;gene=xis;gene_biotype=protein_coding;locus_tag=C9E94_RS00630;old_locus_tag=C9E94_00640
NZ_PYJR01000008.1	Protein Homology	CDS	8232	8480	.	-	0	ID=cds-WP_000065276.1;Parent=gene-C9E94_RS00630;Dbxref=GenBank:WP_000065276.1;Name=WP_000065276.1;gbkey=CDS;gene=xis;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459981.1;locus_tag=C9E94_RS00630;product=excisionase Xis;protein_id=WP_000065276.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	8521	8760	.	-	.	ID=gene-C9E94_RS00635;Name=C9E94_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00635;old_locus_tag=C9E94_00645
NZ_PYJR01000008.1	Protein Homology	CDS	8521	8760	.	-	0	ID=cds-WP_001237031.1;Parent=gene-C9E94_RS00635;Dbxref=GenBank:WP_001237031.1;Name=WP_001237031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459982.1;locus_tag=C9E94_RS00635;product=DUF4060 family protein;protein_id=WP_001237031.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	8803	9960	.	-	.	ID=gene-C9E94_RS00640;Name=C9E94_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00640;old_locus_tag=C9E94_00650
NZ_PYJR01000008.1	Protein Homology	CDS	8803	9960	.	-	0	ID=cds-WP_001539618.1;Parent=gene-C9E94_RS00640;Dbxref=GenBank:WP_001539618.1;Name=WP_001539618.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459983.3;locus_tag=C9E94_RS00640;product=RecT family recombinase;protein_id=WP_001539618.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	9923	13123	.	-	.	ID=gene-C9E94_RS00645;Name=C9E94_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00645;old_locus_tag=C9E94_00655
NZ_PYJR01000008.1	Protein Homology	CDS	9923	13123	.	-	0	ID=cds-WP_135400737.1;Parent=gene-C9E94_RS00645;Dbxref=GenBank:WP_135400737.1;Name=WP_135400737.1;Ontology_term=GO:0090304,GO:0051908;gbkey=CDS;go_function=double-stranded DNA 5'-3' DNA exonuclease activity|0051908||IEA;go_process=nucleic acid metabolic process|0090304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000017119.1;locus_tag=C9E94_RS00645;product=RecE family exodeoxyribonuclease;protein_id=WP_135400737.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	13250	13600	.	-	.	ID=gene-C9E94_RS00650;Name=C9E94_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00650;old_locus_tag=C9E94_00660
NZ_PYJR01000008.1	Protein Homology	CDS	13250	13600	.	-	0	ID=cds-WP_022742800.1;Parent=gene-C9E94_RS00650;Dbxref=GenBank:WP_022742800.1;Name=WP_022742800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461566.1;locus_tag=C9E94_RS00650;product=hypothetical protein;protein_id=WP_022742800.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	13622	13792	.	-	.	ID=gene-C9E94_RS23335;Name=C9E94_RS23335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23335
NZ_PYJR01000008.1	Protein Homology	CDS	13622	13792	.	-	0	ID=cds-WP_000551858.1;Parent=gene-C9E94_RS23335;Dbxref=GenBank:WP_000551858.1;Name=WP_000551858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000551857.1;locus_tag=C9E94_RS23335;product=YdaE family protein;protein_id=WP_000551858.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	pseudogene	13785	13940	.	-	.	ID=gene-C9E94_RS23535;Name=C9E94_RS23535;end_range=13940,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23535;partial=true;pseudo=true
NZ_PYJR01000008.1	Protein Homology	CDS	13785	13940	.	-	0	ID=cds-C9E94_RS23535;Parent=gene-C9E94_RS23535;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=13940,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461564.1;locus_tag=C9E94_RS23535;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	14191	14397	.	+	.	ID=gene-C9E94_RS00655;Name=C9E94_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00655;old_locus_tag=C9E94_00665
NZ_PYJR01000008.1	Protein Homology	CDS	14191	14397	.	+	0	ID=cds-WP_000438989.1;Parent=gene-C9E94_RS00655;Dbxref=GenBank:WP_000438989.1;Name=WP_000438989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750115.1;locus_tag=C9E94_RS00655;product=hypothetical protein;protein_id=WP_000438989.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	14424	14858	.	-	.	ID=gene-C9E94_RS00660;Name=C9E94_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00660;old_locus_tag=C9E94_00670
NZ_PYJR01000008.1	Protein Homology	CDS	14424	14858	.	-	0	ID=cds-WP_000091280.1;Parent=gene-C9E94_RS00660;Dbxref=GenBank:WP_000091280.1;Name=WP_000091280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091280.1;locus_tag=C9E94_RS00660;product=hypothetical protein;protein_id=WP_000091280.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	14860	15285	.	-	.	ID=gene-C9E94_RS00665;Name=C9E94_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00665;old_locus_tag=C9E94_00675
NZ_PYJR01000008.1	Protein Homology	CDS	14860	15285	.	-	0	ID=cds-WP_000439725.1;Parent=gene-C9E94_RS00665;Dbxref=GenBank:WP_000439725.1;Name=WP_000439725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000439725.1;locus_tag=C9E94_RS00665;product=hypothetical protein;protein_id=WP_000439725.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	15328	15795	.	-	.	ID=gene-C9E94_RS00670;Name=C9E94_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00670;old_locus_tag=C9E94_00680
NZ_PYJR01000008.1	Protein Homology	CDS	15328	15795	.	-	0	ID=cds-WP_079793610.1;Parent=gene-C9E94_RS00670;Dbxref=GenBank:WP_079793610.1;Name=WP_079793610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000598565.1;locus_tag=C9E94_RS00670;product=helix-turn-helix domain-containing protein;protein_id=WP_079793610.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	15809	16036	.	+	.	ID=gene-C9E94_RS00675;Name=C9E94_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00675;old_locus_tag=C9E94_00685
NZ_PYJR01000008.1	Protein Homology	CDS	15809	16036	.	+	0	ID=cds-WP_000145711.1;Parent=gene-C9E94_RS00675;Dbxref=GenBank:WP_000145711.1;Name=WP_000145711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000145711.1;locus_tag=C9E94_RS00675;product=transcriptional regulator;protein_id=WP_000145711.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	16002	16376	.	+	.	ID=gene-C9E94_RS00680;Name=C9E94_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00680;old_locus_tag=C9E94_00690
NZ_PYJR01000008.1	Protein Homology	CDS	16002	16376	.	+	0	ID=cds-WP_135400739.1;Parent=gene-C9E94_RS00680;Dbxref=GenBank:WP_135400739.1;Name=WP_135400739.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459988.1;locus_tag=C9E94_RS00680;product=CII family transcriptional regulator;protein_id=WP_135400739.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	16569	17486	.	+	.	ID=gene-C9E94_RS00685;Name=C9E94_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00685;old_locus_tag=C9E94_00695
NZ_PYJR01000008.1	Protein Homology	CDS	16569	17486	.	+	0	ID=cds-WP_000431315.1;Parent=gene-C9E94_RS00685;Dbxref=GenBank:WP_000431315.1;Name=WP_000431315.1;Ontology_term=GO:0006260;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000431315.1;locus_tag=C9E94_RS00685;product=replication protein;protein_id=WP_000431315.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	17483	18178	.	+	.	ID=gene-C9E94_RS00690;Name=C9E94_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00690;old_locus_tag=C9E94_00700
NZ_PYJR01000008.1	Protein Homology	CDS	17483	18178	.	+	0	ID=cds-WP_001537422.1;Parent=gene-C9E94_RS00690;Dbxref=GenBank:WP_001537422.1;Name=WP_001537422.1;Ontology_term=GO:0006270;gbkey=CDS;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801766.1;locus_tag=C9E94_RS00690;product=replication protein P;protein_id=WP_001537422.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	pseudogene	18192	18426	.	+	.	ID=gene-C9E94_RS23760;Name=C9E94_RS23760;end_range=18426,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23760;old_locus_tag=C9E94_00705;partial=true;pseudo=true
NZ_PYJR01000008.1	Protein Homology	CDS	18192	18426	.	+	0	ID=cds-C9E94_RS23760;Parent=gene-C9E94_RS23760;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=18426,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000664383.1;locus_tag=C9E94_RS23760;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	18652	18960	.	+	.	ID=gene-C9E94_RS00700;Name=C9E94_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00700;old_locus_tag=C9E94_00710
NZ_PYJR01000008.1	Protein Homology	CDS	18652	18960	.	+	0	ID=cds-WP_000227529.1;Parent=gene-C9E94_RS00700;Dbxref=GenBank:WP_000227529.1;Name=WP_000227529.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016343.6;locus_tag=C9E94_RS00700;product=DUF551 domain-containing protein;protein_id=WP_000227529.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	18995	19255	.	+	.	ID=gene-C9E94_RS00705;Name=C9E94_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00705;old_locus_tag=C9E94_00715
NZ_PYJR01000008.1	Protein Homology	CDS	18995	19255	.	+	0	ID=cds-WP_000273939.1;Parent=gene-C9E94_RS00705;Dbxref=GenBank:WP_000273939.1;Name=WP_000273939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000946114.1;locus_tag=C9E94_RS00705;product=hypothetical protein;protein_id=WP_000273939.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	19539	19772	.	+	.	ID=gene-C9E94_RS00710;Name=C9E94_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00710;old_locus_tag=C9E94_00720
NZ_PYJR01000008.1	Protein Homology	CDS	19539	19772	.	+	0	ID=cds-WP_001217669.1;Parent=gene-C9E94_RS00710;Dbxref=GenBank:WP_001217669.1;Name=WP_001217669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459994.1;locus_tag=C9E94_RS00710;product=DinI family protein;protein_id=WP_001217669.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	19889	20137	.	+	.	ID=gene-C9E94_RS00715;Name=C9E94_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00715;old_locus_tag=C9E94_00725
NZ_PYJR01000008.1	Protein Homology	CDS	19889	20137	.	+	0	ID=cds-WP_014343878.1;Parent=gene-C9E94_RS00715;Dbxref=GenBank:WP_014343878.1;Name=WP_014343878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015702798.1;locus_tag=C9E94_RS00715;product=hypothetical protein;protein_id=WP_014343878.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	20172	20774	.	+	.	ID=gene-C9E94_RS00720;Name=C9E94_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00720;old_locus_tag=C9E94_00730
NZ_PYJR01000008.1	Protein Homology	CDS	20172	20774	.	+	0	ID=cds-WP_001750112.1;Parent=gene-C9E94_RS00720;Dbxref=GenBank:WP_001750112.1;Name=WP_001750112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459995.1;locus_tag=C9E94_RS00720;product=DUF1367 family protein;protein_id=WP_001750112.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	20774	20980	.	+	.	ID=gene-C9E94_RS23545;Name=C9E94_RS23545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23545;old_locus_tag=C9E94_00735
NZ_PYJR01000008.1	Protein Homology	CDS	20774	20980	.	+	0	ID=cds-WP_058653438.1;Parent=gene-C9E94_RS23545;Dbxref=GenBank:WP_058653438.1;Name=WP_058653438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528771.1;locus_tag=C9E94_RS23545;product=hypothetical protein;protein_id=WP_058653438.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	20983	21594	.	+	.	ID=gene-C9E94_RS00730;Name=C9E94_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00730;old_locus_tag=C9E94_00740
NZ_PYJR01000008.1	Protein Homology	CDS	20983	21594	.	+	0	ID=cds-WP_058653429.1;Parent=gene-C9E94_RS00730;Dbxref=GenBank:WP_058653429.1;Name=WP_058653429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461554.1;locus_tag=C9E94_RS00730;product=recombination protein NinG;protein_id=WP_058653429.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	21591	21737	.	+	.	ID=gene-C9E94_RS00735;Name=C9E94_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00735;old_locus_tag=C9E94_00745
NZ_PYJR01000008.1	Protein Homology	CDS	21591	21737	.	+	0	ID=cds-WP_001617856.1;Parent=gene-C9E94_RS00735;Dbxref=GenBank:WP_001617856.1;Name=WP_001617856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001617856.1;locus_tag=C9E94_RS00735;product=YlcG family protein;protein_id=WP_001617856.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	21727	22524	.	+	.	ID=gene-C9E94_RS00740;Name=C9E94_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00740;old_locus_tag=C9E94_00750
NZ_PYJR01000008.1	Protein Homology	CDS	21727	22524	.	+	0	ID=cds-WP_052942646.1;Parent=gene-C9E94_RS00740;Dbxref=GenBank:WP_052942646.1;Name=WP_052942646.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459997.1;locus_tag=C9E94_RS00740;product=antitermination protein Q;protein_id=WP_052942646.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	22923	23048	.	+	.	ID=gene-C9E94_RS00745;Name=C9E94_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00745;old_locus_tag=C9E94_00755
NZ_PYJR01000008.1	Protein Homology	CDS	22923	23048	.	+	0	ID=cds-WP_001534733.1;Parent=gene-C9E94_RS00745;Dbxref=GenBank:WP_001534733.1;Name=WP_001534733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459999.1;locus_tag=C9E94_RS00745;product=hypothetical protein;protein_id=WP_001534733.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	23184	23633	.	-	.	ID=gene-C9E94_RS00750;Name=C9E94_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00750;old_locus_tag=C9E94_00760
NZ_PYJR01000008.1	Protein Homology	CDS	23184	23633	.	-	0	ID=cds-WP_023251956.1;Parent=gene-C9E94_RS00750;Dbxref=GenBank:WP_023251956.1;Name=WP_023251956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460000.1;locus_tag=C9E94_RS00750;product=hypothetical protein;protein_id=WP_023251956.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	23850	24239	.	+	.	ID=gene-C9E94_RS00755;Name=C9E94_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00755;old_locus_tag=C9E94_00765
NZ_PYJR01000008.1	Protein Homology	CDS	23850	24239	.	+	0	ID=cds-WP_001294875.1;Parent=gene-C9E94_RS00755;Dbxref=GenBank:WP_001294875.1;Name=WP_001294875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001294874.1;locus_tag=C9E94_RS00755;product=phage holin family protein;protein_id=WP_001294875.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	24226	24507	.	+	.	ID=gene-C9E94_RS00760;Name=C9E94_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00760;old_locus_tag=C9E94_00770
NZ_PYJR01000008.1	Protein Homology	CDS	24226	24507	.	+	0	ID=cds-WP_021000643.1;Parent=gene-C9E94_RS00760;Dbxref=GenBank:WP_021000643.1;Name=WP_021000643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004899663.1;locus_tag=C9E94_RS00760;product=phage holin family protein;protein_id=WP_021000643.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	24507	25121	.	+	.	ID=gene-C9E94_RS00765;Name=C9E94_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00765;old_locus_tag=C9E94_00775
NZ_PYJR01000008.1	Protein Homology	CDS	24507	25121	.	+	0	ID=cds-WP_052942647.1;Parent=gene-C9E94_RS00765;Dbxref=GenBank:WP_052942647.1;Name=WP_052942647.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459884.1;locus_tag=C9E94_RS00765;product=glycoside hydrolase family 19 protein;protein_id=WP_052942647.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	25118	25660	.	+	.	ID=gene-C9E94_RS00770;Name=C9E94_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00770;old_locus_tag=C9E94_00780
NZ_PYJR01000008.1	Protein Homology	CDS	25118	25660	.	+	0	ID=cds-WP_000636436.1;Parent=gene-C9E94_RS00770;Dbxref=GenBank:WP_000636436.1;Name=WP_000636436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000636436.1;locus_tag=C9E94_RS00770;product=DUF2514 family protein;protein_id=WP_000636436.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	25763	26266	.	+	.	ID=gene-C9E94_RS00775;Name=C9E94_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00775;old_locus_tag=C9E94_00785
NZ_PYJR01000008.1	Protein Homology	CDS	25763	26266	.	+	0	ID=cds-WP_023136440.1;Parent=gene-C9E94_RS00775;Dbxref=GenBank:WP_023136440.1;Name=WP_023136440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252716.1;locus_tag=C9E94_RS00775;product=hypothetical protein;protein_id=WP_023136440.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	26525	27070	.	+	.	ID=gene-C9E94_RS00780;Name=C9E94_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00780;old_locus_tag=C9E94_00795
NZ_PYJR01000008.1	Protein Homology	CDS	26525	27070	.	+	0	ID=cds-WP_001102153.1;Parent=gene-C9E94_RS00780;Dbxref=GenBank:WP_001102153.1;Name=WP_001102153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461545.2;locus_tag=C9E94_RS00780;product=terminase small subunit;protein_id=WP_001102153.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	27042	28973	.	+	.	ID=gene-C9E94_RS00785;Name=C9E94_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00785;old_locus_tag=C9E94_00800
NZ_PYJR01000008.1	Protein Homology	CDS	27042	28973	.	+	0	ID=cds-WP_000623092.1;Parent=gene-C9E94_RS00785;Dbxref=GenBank:WP_000623092.1;Name=WP_000623092.1;Ontology_term=GO:0004519,GO:0005524,GO:0016887;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461544.1;locus_tag=C9E94_RS00785;product=phage terminase large subunit family protein;protein_id=WP_000623092.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	28957	29160	.	+	.	ID=gene-C9E94_RS00790;Name=C9E94_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00790;old_locus_tag=C9E94_00805
NZ_PYJR01000008.1	Protein Homology	CDS	28957	29160	.	+	0	ID=cds-WP_000201415.1;Parent=gene-C9E94_RS00790;Dbxref=GenBank:WP_000201415.1;Name=WP_000201415.1;Ontology_term=GO:0019058;gbkey=CDS;go_process=viral life cycle|0019058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461543.1;locus_tag=C9E94_RS00790;product=phage head-tail joining protein;protein_id=WP_000201415.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	29157	30737	.	+	.	ID=gene-C9E94_RS00795;Name=C9E94_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00795;old_locus_tag=C9E94_00810
NZ_PYJR01000008.1	Protein Homology	CDS	29157	30737	.	+	0	ID=cds-WP_000831820.1;Parent=gene-C9E94_RS00795;Dbxref=GenBank:WP_000831820.1;Name=WP_000831820.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461542.1;locus_tag=C9E94_RS00795;product=phage portal protein;protein_id=WP_000831820.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	30727	32223	.	+	.	ID=gene-C9E94_RS00800;Name=C9E94_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00800;old_locus_tag=C9E94_00815
NZ_PYJR01000008.1	Protein Homology	CDS	30727	32223	.	+	0	ID=cds-WP_001189496.1;Parent=gene-C9E94_RS00800;Dbxref=GenBank:WP_001189496.1;Name=WP_001189496.1;Ontology_term=GO:0006508,GO:0008233,GO:0008236;gbkey=CDS;go_function=peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461541.1;locus_tag=C9E94_RS00800;product=S49 family peptidase;protein_id=WP_001189496.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	32236	32583	.	+	.	ID=gene-C9E94_RS00805;Name=C9E94_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00805;old_locus_tag=C9E94_00820
NZ_PYJR01000008.1	Protein Homology	CDS	32236	32583	.	+	0	ID=cds-WP_000011260.1;Parent=gene-C9E94_RS00805;Dbxref=GenBank:WP_000011260.1;Name=WP_000011260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461540.1;locus_tag=C9E94_RS00805;product=head decoration protein;protein_id=WP_000011260.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	32638	33666	.	+	.	ID=gene-C9E94_RS00810;Name=C9E94_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00810;old_locus_tag=C9E94_00825
NZ_PYJR01000008.1	Protein Homology	CDS	32638	33666	.	+	0	ID=cds-WP_000522566.1;Parent=gene-C9E94_RS00810;Dbxref=GenBank:WP_000522566.1;Name=WP_000522566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461539.1;locus_tag=C9E94_RS00810;product=major capsid protein;protein_id=WP_000522566.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	33724	34083	.	+	.	ID=gene-C9E94_RS00815;Name=C9E94_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00815;old_locus_tag=C9E94_00830
NZ_PYJR01000008.1	Protein Homology	CDS	33724	34083	.	+	0	ID=cds-WP_000201486.1;Parent=gene-C9E94_RS00815;Dbxref=GenBank:WP_000201486.1;Name=WP_000201486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461538.1;locus_tag=C9E94_RS00815;product=DNA-packaging protein FI;protein_id=WP_000201486.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	34094	34477	.	+	.	ID=gene-C9E94_RS00820;Name=C9E94_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00820;old_locus_tag=C9E94_00835
NZ_PYJR01000008.1	Protein Homology	CDS	34094	34477	.	+	0	ID=cds-WP_000083294.1;Parent=gene-C9E94_RS00820;Dbxref=GenBank:WP_000083294.1;Name=WP_000083294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461537.1;locus_tag=C9E94_RS00820;product=head-tail joining protein;protein_id=WP_000083294.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	34505	35083	.	+	.	ID=gene-C9E94_RS00825;Name=C9E94_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00825;old_locus_tag=C9E94_00840
NZ_PYJR01000008.1	Protein Homology	CDS	34505	35083	.	+	0	ID=cds-WP_000677089.1;Parent=gene-C9E94_RS00825;Dbxref=GenBank:WP_000677089.1;Name=WP_000677089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461536.1;locus_tag=C9E94_RS00825;product=phage tail protein;protein_id=WP_000677089.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	35132	36262	.	-	.	ID=gene-C9E94_RS00830;Name=C9E94_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00830;old_locus_tag=C9E94_00845
NZ_PYJR01000008.1	Protein Homology	CDS	35132	36262	.	-	0	ID=cds-WP_000817263.1;Parent=gene-C9E94_RS00830;Dbxref=GenBank:WP_000817263.1;Name=WP_000817263.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000817271.1;locus_tag=C9E94_RS00830;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=WP_000817263.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	36371	36772	.	+	.	ID=gene-C9E94_RS00835;Name=C9E94_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00835;old_locus_tag=C9E94_00850
NZ_PYJR01000008.1	Protein Homology	CDS	36371	36772	.	+	0	ID=cds-WP_000033882.1;Parent=gene-C9E94_RS00835;Dbxref=GenBank:WP_000033882.1;Name=WP_000033882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461534.1;locus_tag=C9E94_RS00835;product=phage minor tail U family protein;protein_id=WP_000033882.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	36780	37526	.	+	.	ID=gene-C9E94_RS00840;Name=C9E94_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00840;old_locus_tag=C9E94_00855
NZ_PYJR01000008.1	Protein Homology	CDS	36780	37526	.	+	0	ID=cds-WP_000971954.1;Parent=gene-C9E94_RS00840;Dbxref=GenBank:WP_000971954.1;Name=WP_000971954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461533.1;locus_tag=C9E94_RS00840;product=phage tail tube protein;protein_id=WP_000971954.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	37577	37972	.	+	.	ID=gene-C9E94_RS00845;Name=gpG;gbkey=Gene;gene=gpG;gene_biotype=protein_coding;locus_tag=C9E94_RS00845;old_locus_tag=C9E94_00860
NZ_PYJR01000008.1	Protein Homology	CDS	37577	37972	.	+	0	ID=cds-WP_000479607.1;Parent=gene-C9E94_RS00845;Dbxref=GenBank:WP_000479607.1;Name=WP_000479607.1;gbkey=CDS;gene=gpG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461532.1;locus_tag=C9E94_RS00845;product=phage tail assembly chaperone G;protein_id=WP_000479607.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	37969	38307	.	+	.	ID=gene-C9E94_RS00850;Name=C9E94_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00850;old_locus_tag=C9E94_00865
NZ_PYJR01000008.1	Protein Homology	CDS	37969	38307	.	+	0	ID=cds-WP_010989052.1;Parent=gene-C9E94_RS00850;Dbxref=GenBank:WP_010989052.1;Name=WP_010989052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461531.1;locus_tag=C9E94_RS00850;product=phage tail assembly protein T;protein_id=WP_010989052.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	38279	41320	.	+	.	ID=gene-C9E94_RS00855;Name=C9E94_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00855;old_locus_tag=C9E94_00870
NZ_PYJR01000008.1	Protein Homology	CDS	38279	41320	.	+	0	ID=cds-WP_080204061.1;Parent=gene-C9E94_RS00855;Dbxref=GenBank:WP_080204061.1;Name=WP_080204061.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006669503.1;locus_tag=C9E94_RS00855;product=phage tail tape measure protein;protein_id=WP_080204061.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	41323	41652	.	+	.	ID=gene-C9E94_RS00860;Name=C9E94_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00860;old_locus_tag=C9E94_00875
NZ_PYJR01000008.1	Protein Homology	CDS	41323	41652	.	+	0	ID=cds-WP_000447369.1;Parent=gene-C9E94_RS00860;Dbxref=GenBank:WP_000447369.1;Name=WP_000447369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461529.1;locus_tag=C9E94_RS00860;product=phage tail protein;protein_id=WP_000447369.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	41662	42360	.	+	.	ID=gene-C9E94_RS00865;Name=C9E94_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00865;old_locus_tag=C9E94_00880
NZ_PYJR01000008.1	Protein Homology	CDS	41662	42360	.	+	0	ID=cds-WP_001152690.1;Parent=gene-C9E94_RS00865;Dbxref=GenBank:WP_001152690.1;Name=WP_001152690.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461528.1;locus_tag=C9E94_RS00865;product=phage minor tail protein L;protein_id=WP_001152690.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	42367	43104	.	+	.	ID=gene-C9E94_RS00870;Name=C9E94_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00870;old_locus_tag=C9E94_00885
NZ_PYJR01000008.1	Protein Homology	CDS	42367	43104	.	+	0	ID=cds-WP_000662740.1;Parent=gene-C9E94_RS00870;Dbxref=GenBank:WP_000662740.1;Name=WP_000662740.1;Ontology_term=GO:0006508,GO:0008234,GO:0008235,GO:0008270;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA,metalloexopeptidase activity|0008235||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000662739.1;locus_tag=C9E94_RS00870;product=C40 family peptidase;protein_id=WP_000662740.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	43002	43649	.	+	.	ID=gene-C9E94_RS00875;Name=C9E94_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00875;old_locus_tag=C9E94_00890
NZ_PYJR01000008.1	Protein Homology	CDS	43002	43649	.	+	0	ID=cds-WP_023196420.1;Parent=gene-C9E94_RS00875;Dbxref=GenBank:WP_023196420.1;Name=WP_023196420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461526.1;locus_tag=C9E94_RS00875;product=tail assembly protein;protein_id=WP_023196420.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	43712	47074	.	+	.	ID=gene-C9E94_RS00880;Name=gpJ;gbkey=Gene;gene=gpJ;gene_biotype=protein_coding;locus_tag=C9E94_RS00880;old_locus_tag=C9E94_00895
NZ_PYJR01000008.1	Protein Homology	CDS	43712	47074	.	+	0	ID=cds-WP_001537444.1;Parent=gene-C9E94_RS00880;Dbxref=GenBank:WP_001537444.1;Name=WP_001537444.1;gbkey=CDS;gene=gpJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461525.2;locus_tag=C9E94_RS00880;product=phage attachment tail tip protein J;protein_id=WP_001537444.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	47113	47355	.	+	.	ID=gene-C9E94_RS00885;Name=C9E94_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00885;old_locus_tag=C9E94_00900
NZ_PYJR01000008.1	Protein Homology	CDS	47113	47355	.	+	0	ID=cds-WP_000178851.1;Parent=gene-C9E94_RS00885;Dbxref=GenBank:WP_000178851.1;Name=WP_000178851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178849.1;locus_tag=C9E94_RS00885;product=hypothetical protein;protein_id=WP_000178851.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	47409	49847	.	+	.	ID=gene-C9E94_RS00890;Name=C9E94_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00890;old_locus_tag=C9E94_00905
NZ_PYJR01000008.1	Protein Homology	CDS	47409	49847	.	+	0	ID=cds-WP_135400738.1;Parent=gene-C9E94_RS00890;Dbxref=GenBank:WP_135400738.1;Name=WP_135400738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460024.1;locus_tag=C9E94_RS00890;product=phage tail protein;protein_id=WP_135400738.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	49844	50668	.	+	.	ID=gene-C9E94_RS23410;Name=C9E94_RS23410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23410
NZ_PYJR01000008.1	Protein Homology	CDS	49844	50668	.	+	0	ID=cds-WP_217810250.1;Parent=gene-C9E94_RS23410;Dbxref=GenBank:WP_217810250.1;Name=WP_217810250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461523.1;locus_tag=C9E94_RS23410;product=macro domain-containing protein;protein_id=WP_217810250.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	50658	51239	.	+	.	ID=gene-C9E94_RS00905;Name=C9E94_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00905;old_locus_tag=C9E94_00920
NZ_PYJR01000008.1	Protein Homology	CDS	50658	51239	.	+	0	ID=cds-WP_000143158.1;Parent=gene-C9E94_RS00905;Dbxref=GenBank:WP_000143158.1;Name=WP_000143158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000143158.1;locus_tag=C9E94_RS00905;product=tail fiber assembly protein;protein_id=WP_000143158.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	gene	51436	52158	.	-	.	ID=gene-C9E94_RS00910;Name=sopE;gbkey=Gene;gene=sopE;gene_biotype=protein_coding;locus_tag=C9E94_RS00910;old_locus_tag=C9E94_00925
NZ_PYJR01000008.1	Protein Homology	CDS	51436	52158	.	-	0	ID=cds-WP_000161705.1;Parent=gene-C9E94_RS00910;Dbxref=GenBank:WP_000161705.1;Name=WP_000161705.1;gbkey=CDS;gene=sopE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000161708.1;locus_tag=C9E94_RS00910;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE;protein_id=WP_000161705.1;transl_table=11
NZ_PYJR01000008.1	RefSeq	pseudogene	52368	52589	.	+	.	ID=gene-C9E94_RS00915;Name=C9E94_RS00915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS00915;old_locus_tag=C9E94_00930;partial=true;pseudo=true;start_range=.,52368
NZ_PYJR01000008.1	Protein Homology	CDS	52368	52589	.	+	0	ID=cds-C9E94_RS00915;Parent=gene-C9E94_RS00915;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006673699.1;locus_tag=C9E94_RS00915;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,52368;transl_table=11
##sequence-region NZ_PYJR01000025.1 1 50551
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000025.1	RefSeq	region	1	50551	.	+	.	ID=NZ_PYJR01000025.1:1..50551;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000025.1	RefSeq	gene	61	1461	.	-	.	ID=gene-C9E94_RS02195;Name=C9E94_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02195;old_locus_tag=C9E94_02255
NZ_PYJR01000025.1	Protein Homology	CDS	61	1461	.	-	0	ID=cds-WP_000724469.1;Parent=gene-C9E94_RS02195;Dbxref=GenBank:WP_000724469.1;Name=WP_000724469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462720.1;locus_tag=C9E94_RS02195;product=cytochrome-c peroxidase;protein_id=WP_000724469.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	1651	2283	.	-	.	ID=gene-C9E94_RS02200;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=C9E94_RS02200;old_locus_tag=C9E94_02260
NZ_PYJR01000025.1	Protein Homology	CDS	1651	2283	.	-	0	ID=cds-WP_000595421.1;Parent=gene-C9E94_RS02200;Dbxref=GenBank:WP_000595421.1;Name=WP_000595421.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462721.1;locus_tag=C9E94_RS02200;product=molecular chaperone TorD;protein_id=WP_000595421.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	2276	4828	.	-	.	ID=gene-C9E94_RS02205;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=C9E94_RS02205;old_locus_tag=C9E94_02265
NZ_PYJR01000025.1	Protein Homology	CDS	2276	4828	.	-	0	ID=cds-WP_020437375.1;Parent=gene-C9E94_RS02205;Dbxref=GenBank:WP_020437375.1;Name=WP_020437375.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462722.1;locus_tag=C9E94_RS02205;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_020437375.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	4818	6002	.	-	.	ID=gene-C9E94_RS02210;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=C9E94_RS02210;old_locus_tag=C9E94_02270
NZ_PYJR01000025.1	Protein Homology	CDS	4818	6002	.	-	0	ID=cds-WP_001230254.1;Parent=gene-C9E94_RS02210;Dbxref=GenBank:WP_001230254.1;Name=WP_001230254.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462723.1;locus_tag=C9E94_RS02210;product=pentaheme c-type cytochrome TorC;protein_id=WP_001230254.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	6132	6824	.	+	.	ID=gene-C9E94_RS02215;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=C9E94_RS02215;old_locus_tag=C9E94_02275
NZ_PYJR01000025.1	Protein Homology	CDS	6132	6824	.	+	0	ID=cds-WP_001747553.1;Parent=gene-C9E94_RS02215;Dbxref=GenBank:WP_001747553.1;Name=WP_001747553.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462724.1;locus_tag=C9E94_RS02215;product=two-component system response regulator TorR;protein_id=WP_001747553.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	6797	7837	.	-	.	ID=gene-C9E94_RS02220;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=C9E94_RS02220;old_locus_tag=C9E94_02280
NZ_PYJR01000025.1	Protein Homology	CDS	6797	7837	.	-	0	ID=cds-WP_001202038.1;Parent=gene-C9E94_RS02220;Dbxref=GenBank:WP_001202038.1;Name=WP_001202038.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462725.1;locus_tag=C9E94_RS02220;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_001202038.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	7917	10652	.	+	.	ID=gene-C9E94_RS02225;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=C9E94_RS02225;old_locus_tag=C9E94_02285
NZ_PYJR01000025.1	Protein Homology	CDS	7917	10652	.	+	0	ID=cds-WP_135400789.1;Parent=gene-C9E94_RS02225;Dbxref=GenBank:WP_135400789.1;Name=WP_135400789.1;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=C9E94_RS02225;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=WP_135400789.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	10678	12015	.	-	.	ID=gene-C9E94_RS02230;Name=C9E94_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02230;old_locus_tag=C9E94_02290
NZ_PYJR01000025.1	Protein Homology	CDS	10678	12015	.	-	0	ID=cds-WP_000253524.1;Parent=gene-C9E94_RS02230;Dbxref=GenBank:WP_000253524.1;Name=WP_000253524.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462727.1;locus_tag=C9E94_RS02230;product=MFS transporter;protein_id=WP_000253524.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	12100	13248	.	-	.	ID=gene-C9E94_RS02235;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=C9E94_RS02235;old_locus_tag=C9E94_02295
NZ_PYJR01000025.1	Protein Homology	CDS	12100	13248	.	-	0	ID=cds-WP_000704735.1;Parent=gene-C9E94_RS02235;Dbxref=GenBank:WP_000704735.1;Name=WP_000704735.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=C9E94_RS02235;product=galactonate dehydratase;protein_id=WP_000704735.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	13245	13862	.	-	.	ID=gene-C9E94_RS02240;Name=C9E94_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02240;old_locus_tag=C9E94_02300
NZ_PYJR01000025.1	Protein Homology	CDS	13245	13862	.	-	0	ID=cds-WP_001198742.1;Parent=gene-C9E94_RS02240;Dbxref=GenBank:WP_001198742.1;Name=WP_001198742.1;Ontology_term=GO:0034194,GO:0008674;gbkey=CDS;go_function=2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity|0008674||IEA;go_process=D-galactonate catabolic process|0034194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229569.1;locus_tag=C9E94_RS02240;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_001198742.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	13846	14724	.	-	.	ID=gene-C9E94_RS02245;Name=C9E94_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02245;old_locus_tag=C9E94_02305
NZ_PYJR01000025.1	Protein Homology	CDS	13846	14724	.	-	0	ID=cds-WP_135400790.1;Parent=gene-C9E94_RS02245;Dbxref=GenBank:WP_135400790.1;Name=WP_135400790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462729.1;locus_tag=C9E94_RS02245;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_135400790.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	14721	15410	.	-	.	ID=gene-C9E94_RS02250;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=C9E94_RS02250;old_locus_tag=C9E94_02310
NZ_PYJR01000025.1	Protein Homology	CDS	14721	15410	.	-	0	ID=cds-WP_000174317.1;Parent=gene-C9E94_RS02250;Dbxref=GenBank:WP_000174317.1;Name=WP_000174317.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462730.1;locus_tag=C9E94_RS02250;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=WP_000174317.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	15671	16516	.	-	.	ID=gene-C9E94_RS02255;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=C9E94_RS02255;old_locus_tag=C9E94_02315
NZ_PYJR01000025.1	Protein Homology	CDS	15671	16516	.	-	0	ID=cds-WP_000985570.1;Parent=gene-C9E94_RS02255;Dbxref=GenBank:WP_000985570.1;Name=WP_000985570.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462731.1;locus_tag=C9E94_RS02255;product=sugar-phosphatase;protein_id=WP_000985570.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	16821	18083	.	+	.	ID=gene-C9E94_RS02260;Name=C9E94_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02260;old_locus_tag=C9E94_02320
NZ_PYJR01000025.1	Protein Homology	CDS	16821	18083	.	+	0	ID=cds-WP_000061257.1;Parent=gene-C9E94_RS02260;Dbxref=GenBank:WP_000061257.1;Name=WP_000061257.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462732.1;locus_tag=C9E94_RS02260;product=MFS transporter;protein_id=WP_000061257.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	18097	19290	.	+	.	ID=gene-C9E94_RS02265;Name=C9E94_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02265;old_locus_tag=C9E94_02325
NZ_PYJR01000025.1	Protein Homology	CDS	18097	19290	.	+	0	ID=cds-WP_023180834.1;Parent=gene-C9E94_RS02265;Dbxref=GenBank:WP_023180834.1;Name=WP_023180834.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462733.1;locus_tag=C9E94_RS02265;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_023180834.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	19405	20301	.	+	.	ID=gene-C9E94_RS02270;Name=C9E94_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02270;old_locus_tag=C9E94_02330
NZ_PYJR01000025.1	Protein Homology	CDS	19405	20301	.	+	0	ID=cds-WP_001054596.1;Parent=gene-C9E94_RS02270;Dbxref=GenBank:WP_001054596.1;Name=WP_001054596.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462734.1;locus_tag=C9E94_RS02270;product=LysR family transcriptional regulator;protein_id=WP_001054596.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	20320	22734	.	-	.	ID=gene-C9E94_RS02275;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=C9E94_RS02275;old_locus_tag=C9E94_02335
NZ_PYJR01000025.1	Protein Homology	CDS	20320	22734	.	-	0	ID=cds-WP_000072047.1;Parent=gene-C9E94_RS02275;Dbxref=GenBank:WP_000072047.1;Name=WP_000072047.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=C9E94_RS02275;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_000072047.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	22763	23836	.	-	.	ID=gene-C9E94_RS02280;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=C9E94_RS02280;old_locus_tag=C9E94_02340
NZ_PYJR01000025.1	Protein Homology	CDS	22763	23836	.	-	0	ID=cds-WP_000060081.1;Parent=gene-C9E94_RS02280;Dbxref=GenBank:WP_000060081.1;Name=WP_000060081.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=C9E94_RS02280;product=DNA replication/repair protein RecF;protein_id=WP_000060081.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	23984	25084	.	-	.	ID=gene-C9E94_RS02285;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=C9E94_RS02285;old_locus_tag=C9E94_02345
NZ_PYJR01000025.1	Protein Homology	CDS	23984	25084	.	-	0	ID=cds-WP_000673474.1;Parent=gene-C9E94_RS02285;Dbxref=GenBank:WP_000673474.1;Name=WP_000673474.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=C9E94_RS02285;product=DNA polymerase III subunit beta;protein_id=WP_000673474.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	25089	26489	.	-	.	ID=gene-C9E94_RS02290;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=C9E94_RS02290;old_locus_tag=C9E94_02350
NZ_PYJR01000025.1	Protein Homology	CDS	25089	26489	.	-	0	ID=cds-WP_000059093.1;Parent=gene-C9E94_RS02290;Dbxref=GenBank:WP_000059093.1;Name=WP_000059093.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462738.1;locus_tag=C9E94_RS02290;product=chromosomal replication initiator protein DnaA;protein_id=WP_000059093.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	26829	26921	.	+	.	ID=gene-C9E94_RS23845;Name=C9E94_RS23845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23845
NZ_PYJR01000025.1	Protein Homology	CDS	26829	26921	.	+	0	ID=cds-WP_418142141.1;Parent=gene-C9E94_RS23845;Dbxref=GenBank:WP_418142141.1;Name=WP_418142141.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048187.1;locus_tag=C9E94_RS23845;product=hypothetical protein;protein_id=WP_418142141.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	27150	27290	.	+	.	ID=gene-C9E94_RS02295;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=C9E94_RS02295;old_locus_tag=C9E94_02355
NZ_PYJR01000025.1	Protein Homology	CDS	27150	27290	.	+	0	ID=cds-WP_000831330.1;Parent=gene-C9E94_RS02295;Dbxref=GenBank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=C9E94_RS02295;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	27307	27666	.	+	.	ID=gene-C9E94_RS02300;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=C9E94_RS02300;old_locus_tag=C9E94_02360
NZ_PYJR01000025.1	Protein Homology	CDS	27307	27666	.	+	0	ID=cds-WP_000239725.1;Parent=gene-C9E94_RS02300;Dbxref=GenBank:WP_000239725.1;Name=WP_000239725.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=C9E94_RS02300;product=ribonuclease P protein component;protein_id=WP_000239725.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	27630	27887	.	+	.	ID=gene-C9E94_RS02305;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=C9E94_RS02305;old_locus_tag=C9E94_02365
NZ_PYJR01000025.1	Protein Homology	CDS	27630	27887	.	+	0	ID=cds-WP_001307474.1;Parent=gene-C9E94_RS02305;Dbxref=GenBank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=C9E94_RS02305;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	27890	29536	.	+	.	ID=gene-C9E94_RS02310;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=C9E94_RS02310;old_locus_tag=C9E94_02370
NZ_PYJR01000025.1	Protein Homology	CDS	27890	29536	.	+	0	ID=cds-WP_000378283.1;Parent=gene-C9E94_RS02310;Dbxref=GenBank:WP_000378283.1;Name=WP_000378283.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=C9E94_RS02310;product=membrane protein insertase YidC;protein_id=WP_000378283.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	29678	31042	.	+	.	ID=gene-C9E94_RS02315;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=C9E94_RS02315;old_locus_tag=C9E94_02375
NZ_PYJR01000025.1	Protein Homology	CDS	29678	31042	.	+	0	ID=cds-WP_000019081.1;Parent=gene-C9E94_RS02315;Dbxref=GenBank:WP_000019081.1;Name=WP_000019081.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=C9E94_RS02315;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_000019081.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	pseudogene	31298	32518	.	+	.	ID=gene-C9E94_RS23340;Name=C9E94_RS23340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23340;pseudo=true
NZ_PYJR01000025.1	Protein Homology	CDS	31298	32518	.	+	0	ID=cds-C9E94_RS23340;Parent=gene-C9E94_RS23340;Note=internal stop;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218309.1;locus_tag=C9E94_RS23340;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	32843	33805	.	+	.	ID=gene-C9E94_RS02330;Name=C9E94_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02330;old_locus_tag=C9E94_02395
NZ_PYJR01000025.1	Protein Homology	CDS	32843	33805	.	+	0	ID=cds-WP_000461381.1;Parent=gene-C9E94_RS02330;Dbxref=GenBank:WP_000461381.1;Name=WP_000461381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462744.1;locus_tag=C9E94_RS02330;product=retron St85 family effector protein;protein_id=WP_000461381.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	33805	34740	.	+	.	ID=gene-C9E94_RS02335;Name=C9E94_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02335;old_locus_tag=C9E94_02400
NZ_PYJR01000025.1	Protein Homology	CDS	33805	34740	.	+	0	ID=cds-WP_000353754.1;Parent=gene-C9E94_RS02335;Dbxref=GenBank:WP_000353754.1;Name=WP_000353754.1;Ontology_term=GO:0001171,GO:0051607;gbkey=CDS;go_process=reverse transcription|0001171||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000353756.1;locus_tag=C9E94_RS02335;product=retron St85 family RNA-directed DNA polymerase;protein_id=WP_000353754.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	35542	36729	.	+	.	ID=gene-C9E94_RS02340;Name=C9E94_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02340;old_locus_tag=C9E94_02410
NZ_PYJR01000025.1	Protein Homology	CDS	35542	36729	.	+	0	ID=cds-WP_000819606.1;Parent=gene-C9E94_RS02340;Dbxref=GenBank:WP_000819606.1;Name=WP_000819606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462746.1;locus_tag=C9E94_RS02340;product=MFS transporter;protein_id=WP_000819606.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	36698	37657	.	+	.	ID=gene-C9E94_RS02345;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=C9E94_RS02345;old_locus_tag=C9E94_02415
NZ_PYJR01000025.1	Protein Homology	CDS	36698	37657	.	+	0	ID=cds-WP_094889345.1;Parent=gene-C9E94_RS02345;Dbxref=GenBank:WP_094889345.1;Name=WP_094889345.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=C9E94_RS02345;product=HTH-type transcriptional regulator YidZ;protein_id=WP_094889345.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	37815	38570	.	+	.	ID=gene-C9E94_RS02350;Name=C9E94_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02350;old_locus_tag=C9E94_02420
NZ_PYJR01000025.1	Protein Homology	CDS	37815	38570	.	+	0	ID=cds-WP_000190678.1;Parent=gene-C9E94_RS02350;Dbxref=GenBank:WP_000190678.1;Name=WP_000190678.1;Ontology_term=GO:0008897;gbkey=CDS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462748.1;locus_tag=C9E94_RS02350;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_000190678.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	38570	39154	.	+	.	ID=gene-C9E94_RS02355;Name=C9E94_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02355;old_locus_tag=C9E94_02425
NZ_PYJR01000025.1	Protein Homology	CDS	38570	39154	.	+	0	ID=cds-WP_001521186.1;Parent=gene-C9E94_RS02355;Dbxref=GenBank:WP_001521186.1;Name=WP_001521186.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462749.3;locus_tag=C9E94_RS02355;product=NADPH-dependent FMN reductase;protein_id=WP_001521186.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	39199	40536	.	-	.	ID=gene-C9E94_RS02360;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=C9E94_RS02360;old_locus_tag=C9E94_02430
NZ_PYJR01000025.1	Protein Homology	CDS	39199	40536	.	-	0	ID=cds-WP_001583487.1;Parent=gene-C9E94_RS02360;Dbxref=GenBank:WP_001583487.1;Name=WP_001583487.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=C9E94_RS02360;product=adenine permease AdeP;protein_id=WP_001583487.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	40705	41370	.	+	.	ID=gene-C9E94_RS02365;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=C9E94_RS02365;old_locus_tag=C9E94_02435
NZ_PYJR01000025.1	Protein Homology	CDS	40705	41370	.	+	0	ID=cds-WP_023234304.1;Parent=gene-C9E94_RS02365;Dbxref=GenBank:WP_023234304.1;Name=WP_023234304.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462751.1;locus_tag=C9E94_RS02365;product=6-phosphogluconate phosphatase;protein_id=WP_023234304.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	41465	42190	.	-	.	ID=gene-C9E94_RS02370;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=C9E94_RS02370;old_locus_tag=C9E94_02440
NZ_PYJR01000025.1	Protein Homology	CDS	41465	42190	.	-	0	ID=cds-WP_000377800.1;Parent=gene-C9E94_RS02370;Dbxref=GenBank:WP_000377800.1;Name=WP_000377800.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462752.1;locus_tag=C9E94_RS02370;product=phosphate signaling complex protein PhoU;protein_id=WP_000377800.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	42205	42978	.	-	.	ID=gene-C9E94_RS02375;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=C9E94_RS02375;old_locus_tag=C9E94_02445
NZ_PYJR01000025.1	Protein Homology	CDS	42205	42978	.	-	0	ID=cds-WP_000063118.1;Parent=gene-C9E94_RS02375;Dbxref=GenBank:WP_000063118.1;Name=WP_000063118.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=C9E94_RS02375;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000063118.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	43065	43955	.	-	.	ID=gene-C9E94_RS02380;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=C9E94_RS02380;old_locus_tag=C9E94_02450
NZ_PYJR01000025.1	Protein Homology	CDS	43065	43955	.	-	0	ID=cds-WP_000212199.1;Parent=gene-C9E94_RS02380;Dbxref=GenBank:WP_000212199.1;Name=WP_000212199.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462754.1;locus_tag=C9E94_RS02380;product=phosphate ABC transporter permease PstA;protein_id=WP_000212199.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	43955	44914	.	-	.	ID=gene-C9E94_RS02385;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=C9E94_RS02385;old_locus_tag=C9E94_02455
NZ_PYJR01000025.1	Protein Homology	CDS	43955	44914	.	-	0	ID=cds-WP_000741630.1;Parent=gene-C9E94_RS02385;Dbxref=GenBank:WP_000741630.1;Name=WP_000741630.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=C9E94_RS02385;product=phosphate ABC transporter permease PstC;protein_id=WP_000741630.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	45050	46090	.	-	.	ID=gene-C9E94_RS02390;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=C9E94_RS02390;old_locus_tag=C9E94_02460
NZ_PYJR01000025.1	Protein Homology	CDS	45050	46090	.	-	0	ID=cds-WP_000867131.1;Parent=gene-C9E94_RS02390;Dbxref=GenBank:WP_000867131.1;Name=WP_000867131.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=C9E94_RS02390;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_000867131.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	46257	47630	.	-	.	ID=gene-C9E94_RS02395;Name=C9E94_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02395;old_locus_tag=C9E94_02465
NZ_PYJR01000025.1	Protein Homology	CDS	46257	47630	.	-	0	ID=cds-WP_135400791.1;Parent=gene-C9E94_RS02395;Dbxref=GenBank:WP_135400791.1;Name=WP_135400791.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462757.1;locus_tag=C9E94_RS02395;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_135400791.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	47679	48497	.	-	.	ID=gene-C9E94_RS02400;Name=C9E94_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02400;old_locus_tag=C9E94_02470
NZ_PYJR01000025.1	Protein Homology	CDS	47679	48497	.	-	0	ID=cds-WP_000166709.1;Parent=gene-C9E94_RS02400;Dbxref=GenBank:WP_000166709.1;Name=WP_000166709.1;Ontology_term=GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462758.1;locus_tag=C9E94_RS02400;product=shikimate 5-dehydrogenase;protein_id=WP_000166709.1;transl_table=11
NZ_PYJR01000025.1	RefSeq	gene	48592	50349	.	+	.	ID=gene-C9E94_RS02405;Name=C9E94_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02405;old_locus_tag=C9E94_02475
NZ_PYJR01000025.1	Protein Homology	CDS	48592	50349	.	+	0	ID=cds-WP_000213164.1;Parent=gene-C9E94_RS02405;Dbxref=GenBank:WP_000213164.1;Name=WP_000213164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462759.1;locus_tag=C9E94_RS02405;product=SgrR family transcriptional regulator;protein_id=WP_000213164.1;transl_table=11
##sequence-region NZ_PYJR01000039.1 1 50134
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000039.1	RefSeq	region	1	50134	.	+	.	ID=NZ_PYJR01000039.1:1..50134;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000039.1	RefSeq	gene	78	725	.	-	.	ID=gene-C9E94_RS04475;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=C9E94_RS04475;old_locus_tag=C9E94_04585
NZ_PYJR01000039.1	Protein Homology	CDS	78	725	.	-	0	ID=cds-WP_001115498.1;Parent=gene-C9E94_RS04475;Dbxref=GenBank:WP_001115498.1;Name=WP_001115498.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461189.1;locus_tag=C9E94_RS04475;product=nitrate/nitrite response regulator protein NarP;protein_id=WP_001115498.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	1455	2018	.	+	.	ID=gene-C9E94_RS04485;Name=pagL;gbkey=Gene;gene=pagL;gene_biotype=protein_coding;locus_tag=C9E94_RS04485;old_locus_tag=C9E94_04595
NZ_PYJR01000039.1	Protein Homology	CDS	1455	2018	.	+	0	ID=cds-WP_000281877.1;Parent=gene-C9E94_RS04485;Dbxref=GenBank:WP_000281877.1;Name=WP_000281877.1;gbkey=CDS;gene=pagL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461188.1;locus_tag=C9E94_RS04485;product=lipid A 3-O-deacylase PagL;protein_id=WP_000281877.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	2210	2413	.	-	.	ID=gene-C9E94_RS04490;Name=C9E94_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04490;old_locus_tag=C9E94_04600
NZ_PYJR01000039.1	Protein Homology	CDS	2210	2413	.	-	0	ID=cds-WP_001653202.1;Parent=gene-C9E94_RS04490;Dbxref=GenBank:WP_001653202.1;Name=WP_001653202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461187.1;locus_tag=C9E94_RS04490;product=virulence protein MsgA;protein_id=WP_001653202.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	2442	2600	.	-	.	ID=gene-C9E94_RS23345;Name=C9E94_RS23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23345
NZ_PYJR01000039.1	GeneMarkS-2+	CDS	2442	2600	.	-	0	ID=cds-WP_000340080.1;Parent=gene-C9E94_RS23345;Dbxref=GenBank:WP_000340080.1;Name=WP_000340080.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS23345;product=hypothetical protein;protein_id=WP_000340080.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	pseudogene	2560	3177	.	+	.	ID=gene-C9E94_RS23855;Name=C9E94_RS23855;end_range=3177,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23855;partial=true;pseudo=true;start_range=.,2560
NZ_PYJR01000039.1	Protein Homology	CDS	2560	3177	.	+	0	ID=cds-C9E94_RS23855;Parent=gene-C9E94_RS23855;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3177,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461524.1;locus_tag=C9E94_RS23855;partial=true;product=phage tail protein;pseudo=true;start_range=.,2560;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	4176	6542	.	+	.	ID=gene-C9E94_RS04505;Name=sspH2;gbkey=Gene;gene=sspH2;gene_biotype=protein_coding;locus_tag=C9E94_RS04505;old_locus_tag=C9E94_04615
NZ_PYJR01000039.1	Protein Homology	CDS	4176	6542	.	+	0	ID=cds-WP_080203709.1;Parent=gene-C9E94_RS04505;Dbxref=GenBank:WP_080203709.1;Name=WP_080203709.1;gbkey=CDS;gene=sspH2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461184.1;locus_tag=C9E94_RS04505;product=SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2;protein_id=WP_080203709.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	pseudogene	6630	6852	.	+	.	ID=gene-C9E94_RS04510;Name=C9E94_RS04510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS04510;old_locus_tag=C9E94_04625;partial=true;pseudo=true;start_range=.,6630
NZ_PYJR01000039.1	Protein Homology	CDS	6630	6852	.	+	0	ID=cds-C9E94_RS04510;Parent=gene-C9E94_RS04510;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=C9E94_RS04510;partial=true;product=DUF4113 domain-containing protein;pseudo=true;start_range=.,6630;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	7163	7239	.	-	.	ID=gene-C9E94_RS04515;Name=C9E94_RS04515;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS04515;old_locus_tag=C9E94_04630
NZ_PYJR01000039.1	tRNAscan-SE	tRNA	7163	7239	.	-	.	ID=rna-C9E94_RS04515;Parent=gene-C9E94_RS04515;anticodon=(pos:complement(7203..7205));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS04515;product=tRNA-Pro
NZ_PYJR01000039.1	tRNAscan-SE	exon	7163	7239	.	-	.	ID=exon-C9E94_RS04515-1;Parent=rna-C9E94_RS04515;anticodon=(pos:complement(7203..7205));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS04515;product=tRNA-Pro
NZ_PYJR01000039.1	RefSeq	gene	7313	9073	.	-	.	ID=gene-C9E94_RS04520;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=C9E94_RS04520;old_locus_tag=C9E94_04635
NZ_PYJR01000039.1	Protein Homology	CDS	7313	9073	.	-	0	ID=cds-WP_000256153.1;Parent=gene-C9E94_RS04520;Dbxref=GenBank:WP_000256153.1;Name=WP_000256153.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=C9E94_RS04520;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_000256153.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	9105	9332	.	-	.	ID=gene-C9E94_RS04525;Name=C9E94_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04525;old_locus_tag=C9E94_04640
NZ_PYJR01000039.1	Protein Homology	CDS	9105	9332	.	-	0	ID=cds-WP_001135904.1;Parent=gene-C9E94_RS04525;Dbxref=GenBank:WP_001135904.1;Name=WP_001135904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461171.1;locus_tag=C9E94_RS04525;product=YejL family protein;protein_id=WP_001135904.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	9512	10519	.	+	.	ID=gene-C9E94_RS04530;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=C9E94_RS04530;old_locus_tag=C9E94_04645
NZ_PYJR01000039.1	Protein Homology	CDS	9512	10519	.	+	0	ID=cds-WP_000050806.1;Parent=gene-C9E94_RS04530;Dbxref=GenBank:WP_000050806.1;Name=WP_000050806.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461170.1;locus_tag=C9E94_RS04530;product=nucleoid-associated protein YejK;protein_id=WP_000050806.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	10547	11167	.	+	.	ID=gene-C9E94_RS04535;Name=C9E94_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04535;old_locus_tag=C9E94_04650
NZ_PYJR01000039.1	Protein Homology	CDS	10547	11167	.	+	0	ID=cds-WP_135400841.1;Parent=gene-C9E94_RS04535;Dbxref=GenBank:WP_135400841.1;Name=WP_135400841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461169.1;locus_tag=C9E94_RS04535;product=hypothetical protein;protein_id=WP_135400841.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	11276	11560	.	-	.	ID=gene-C9E94_RS04540;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=C9E94_RS04540;old_locus_tag=C9E94_04655
NZ_PYJR01000039.1	Protein Homology	CDS	11276	11560	.	-	0	ID=cds-WP_000494192.1;Parent=gene-C9E94_RS04540;Dbxref=GenBank:WP_000494192.1;Name=WP_000494192.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=C9E94_RS04540;product=50S ribosomal protein L25;protein_id=WP_000494192.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	11685	13445	.	-	.	ID=gene-C9E94_RS04545;Name=C9E94_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04545;old_locus_tag=C9E94_04660
NZ_PYJR01000039.1	Protein Homology	CDS	11685	13445	.	-	0	ID=cds-WP_000578121.1;Parent=gene-C9E94_RS04545;Dbxref=GenBank:WP_000578121.1;Name=WP_000578121.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461167.1;locus_tag=C9E94_RS04545;product=DEAD/DEAH box helicase;protein_id=WP_000578121.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	13597	14292	.	+	.	ID=gene-C9E94_RS04550;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=C9E94_RS04550;old_locus_tag=C9E94_04665
NZ_PYJR01000039.1	Protein Homology	CDS	13597	14292	.	+	0	ID=cds-WP_001234836.1;Parent=gene-C9E94_RS04550;Dbxref=GenBank:WP_001234836.1;Name=WP_001234836.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461166.1;locus_tag=C9E94_RS04550;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_001234836.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	14320	15510	.	+	.	ID=gene-C9E94_RS04555;Name=C9E94_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04555;old_locus_tag=C9E94_04670
NZ_PYJR01000039.1	Protein Homology	CDS	14320	15510	.	+	0	ID=cds-WP_000213347.1;Parent=gene-C9E94_RS04555;Dbxref=GenBank:WP_000213347.1;Name=WP_000213347.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461165.1;locus_tag=C9E94_RS04555;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_000213347.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	15901	16245	.	+	.	ID=gene-C9E94_RS04560;Name=C9E94_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04560;old_locus_tag=C9E94_04675
NZ_PYJR01000039.1	Protein Homology	CDS	15901	16245	.	+	0	ID=cds-WP_001094639.1;Parent=gene-C9E94_RS04560;Dbxref=GenBank:WP_001094639.1;Name=WP_001094639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461164.1;locus_tag=C9E94_RS04560;product=YejG family protein;protein_id=WP_001094639.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	16249	17838	.	-	.	ID=gene-C9E94_RS04565;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=C9E94_RS04565;old_locus_tag=C9E94_04680
NZ_PYJR01000039.1	Protein Homology	CDS	16249	17838	.	-	0	ID=cds-WP_135400842.1;Parent=gene-C9E94_RS04565;Dbxref=GenBank:WP_135400842.1;Name=WP_135400842.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461163.1;locus_tag=C9E94_RS04565;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_135400842.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	17840	18865	.	-	.	ID=gene-C9E94_RS04570;Name=C9E94_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04570;old_locus_tag=C9E94_04685
NZ_PYJR01000039.1	Protein Homology	CDS	17840	18865	.	-	0	ID=cds-WP_001137761.1;Parent=gene-C9E94_RS04570;Dbxref=GenBank:WP_001137761.1;Name=WP_001137761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461162.1;locus_tag=C9E94_RS04570;product=ABC transporter permease;protein_id=WP_001137761.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	18865	19959	.	-	.	ID=gene-C9E94_RS04575;Name=C9E94_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04575;old_locus_tag=C9E94_04690
NZ_PYJR01000039.1	Protein Homology	CDS	18865	19959	.	-	0	ID=cds-WP_000501623.1;Parent=gene-C9E94_RS04575;Dbxref=GenBank:WP_000501623.1;Name=WP_000501623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461161.1;locus_tag=C9E94_RS04575;product=microcin C ABC transporter permease YejB;protein_id=WP_000501623.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	19969	21774	.	-	.	ID=gene-C9E94_RS04580;Name=C9E94_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04580;old_locus_tag=C9E94_04695
NZ_PYJR01000039.1	Protein Homology	CDS	19969	21774	.	-	0	ID=cds-WP_000561742.1;Parent=gene-C9E94_RS04580;Dbxref=GenBank:WP_000561742.1;Name=WP_000561742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461160.1;locus_tag=C9E94_RS04580;product=extracellular solute-binding protein;protein_id=WP_000561742.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	21881	23437	.	-	.	ID=gene-C9E94_RS04585;Name=C9E94_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04585;old_locus_tag=C9E94_04700
NZ_PYJR01000039.1	Protein Homology	CDS	21881	23437	.	-	0	ID=cds-WP_135400843.1;Parent=gene-C9E94_RS04585;Dbxref=GenBank:WP_135400843.1;Name=WP_135400843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461159.1;locus_tag=C9E94_RS04585;product=cyclic di-GMP phosphodiesterase;protein_id=WP_135400843.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	23763	24335	.	-	.	ID=gene-C9E94_RS04590;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=C9E94_RS04590;old_locus_tag=C9E94_04710
NZ_PYJR01000039.1	Protein Homology	CDS	23763	24335	.	-	0	ID=cds-WP_000241015.1;Parent=gene-C9E94_RS04590;Dbxref=GenBank:WP_000241015.1;Name=WP_000241015.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461158.1;locus_tag=C9E94_RS04590;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_000241015.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	24749	25468	.	-	.	ID=gene-C9E94_RS04595;Name=C9E94_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04595;old_locus_tag=C9E94_04720
NZ_PYJR01000039.1	Protein Homology	CDS	24749	25468	.	-	0	ID=cds-WP_000178095.1;Parent=gene-C9E94_RS04595;Dbxref=GenBank:WP_000178095.1;Name=WP_000178095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461157.1;locus_tag=C9E94_RS04595;product=phosphatase PAP2 family protein;protein_id=WP_000178095.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	25498	26484	.	-	.	ID=gene-C9E94_RS04600;Name=C9E94_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04600;old_locus_tag=C9E94_04725
NZ_PYJR01000039.1	Protein Homology	CDS	25498	26484	.	-	0	ID=cds-WP_000169350.1;Parent=gene-C9E94_RS04600;Dbxref=GenBank:WP_000169350.1;Name=WP_000169350.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461156.1;locus_tag=C9E94_RS04600;product=CobW family GTP-binding protein;protein_id=WP_000169350.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	26696	27268	.	-	.	ID=gene-C9E94_RS04605;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=C9E94_RS04605;old_locus_tag=C9E94_04730
NZ_PYJR01000039.1	Protein Homology	CDS	26696	27268	.	-	0	ID=cds-WP_001136822.1;Parent=gene-C9E94_RS04605;Dbxref=GenBank:WP_001136822.1;Name=WP_001136822.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=C9E94_RS04605;product=elongation factor P-like protein YeiP;protein_id=WP_001136822.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	27592	27846	.	+	.	ID=gene-C9E94_RS04610;Name=C9E94_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04610;old_locus_tag=C9E94_04735
NZ_PYJR01000039.1	Protein Homology	CDS	27592	27846	.	+	0	ID=cds-WP_001523448.1;Parent=gene-C9E94_RS04610;Dbxref=GenBank:WP_001523448.1;Name=WP_001523448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675765.1;locus_tag=C9E94_RS04610;product=YkgJ family cysteine cluster protein;protein_id=WP_001523448.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	28234	28356	.	+	.	ID=gene-C9E94_RS04615;Name=C9E94_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04615;old_locus_tag=C9E94_04740
NZ_PYJR01000039.1	Protein Homology	CDS	28234	28356	.	+	0	ID=cds-WP_001519564.1;Parent=gene-C9E94_RS04615;Dbxref=GenBank:WP_001519564.1;Name=WP_001519564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461154.1;locus_tag=C9E94_RS04615;product=membrane protein;protein_id=WP_001519564.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	28358	29023	.	+	.	ID=gene-C9E94_RS04620;Name=C9E94_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04620;old_locus_tag=C9E94_04745
NZ_PYJR01000039.1	Protein Homology	CDS	28358	29023	.	+	0	ID=cds-WP_001213897.1;Parent=gene-C9E94_RS04620;Dbxref=GenBank:WP_001213897.1;Name=WP_001213897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461153.1;locus_tag=C9E94_RS04620;product=GNVR domain-containing protein;protein_id=WP_001213897.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	29087	30268	.	-	.	ID=gene-C9E94_RS04625;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=C9E94_RS04625;old_locus_tag=C9E94_04750
NZ_PYJR01000039.1	Protein Homology	CDS	29087	30268	.	-	0	ID=cds-WP_000551937.1;Parent=gene-C9E94_RS04625;Dbxref=GenBank:WP_000551937.1;Name=WP_000551937.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461152.1;locus_tag=C9E94_RS04625;product=sugar efflux transporter SetB;protein_id=WP_000551937.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	30636	31766	.	+	.	ID=gene-C9E94_RS04630;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=C9E94_RS04630;old_locus_tag=C9E94_04755
NZ_PYJR01000039.1	Protein Homology	CDS	30636	31766	.	+	0	ID=cds-WP_000487287.1;Parent=gene-C9E94_RS04630;Dbxref=GenBank:WP_000487287.1;Name=WP_000487287.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461151.1;locus_tag=C9E94_RS04630;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_000487287.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	31766	32704	.	+	.	ID=gene-C9E94_RS04635;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=C9E94_RS04635;old_locus_tag=C9E94_04760
NZ_PYJR01000039.1	Protein Homology	CDS	31766	32704	.	+	0	ID=cds-WP_000091249.1;Parent=gene-C9E94_RS04635;Dbxref=GenBank:WP_000091249.1;Name=WP_000091249.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461150.1;locus_tag=C9E94_RS04635;product=1-phosphofructokinase;protein_id=WP_000091249.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	32721	34409	.	+	.	ID=gene-C9E94_RS04640;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=C9E94_RS04640;old_locus_tag=C9E94_04765
NZ_PYJR01000039.1	Protein Homology	CDS	32721	34409	.	+	0	ID=cds-WP_000854408.1;Parent=gene-C9E94_RS04640;Dbxref=GenBank:WP_000854408.1;Name=WP_000854408.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461149.1;locus_tag=C9E94_RS04640;product=PTS fructose transporter subunit IIBC;protein_id=WP_000854408.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	34474	35331	.	-	.	ID=gene-C9E94_RS04645;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=C9E94_RS04645;old_locus_tag=C9E94_04770
NZ_PYJR01000039.1	Protein Homology	CDS	34474	35331	.	-	0	ID=cds-WP_023232526.1;Parent=gene-C9E94_RS04645;Dbxref=GenBank:WP_023232526.1;Name=WP_023232526.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461148.1;locus_tag=C9E94_RS04645;product=deoxyribonuclease IV;protein_id=WP_023232526.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	35410	36459	.	-	.	ID=gene-C9E94_RS04650;Name=C9E94_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04650;old_locus_tag=C9E94_04775
NZ_PYJR01000039.1	Protein Homology	CDS	35410	36459	.	-	0	ID=cds-WP_000137966.1;Parent=gene-C9E94_RS04650;Dbxref=GenBank:WP_000137966.1;Name=WP_000137966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461147.1;locus_tag=C9E94_RS04650;product=YeiH family protein;protein_id=WP_000137966.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	36580	37443	.	+	.	ID=gene-C9E94_RS04655;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=C9E94_RS04655;old_locus_tag=C9E94_04780
NZ_PYJR01000039.1	Protein Homology	CDS	36580	37443	.	+	0	ID=cds-WP_094889187.1;Parent=gene-C9E94_RS04655;Dbxref=GenBank:WP_094889187.1;Name=WP_094889187.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461146.1;locus_tag=C9E94_RS04655;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_094889187.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	37633	39102	.	+	.	ID=gene-C9E94_RS04660;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=C9E94_RS04660;old_locus_tag=C9E94_04785
NZ_PYJR01000039.1	Protein Homology	CDS	37633	39102	.	+	0	ID=cds-WP_000534999.1;Parent=gene-C9E94_RS04660;Dbxref=GenBank:WP_000534999.1;Name=WP_000534999.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461145.1;locus_tag=C9E94_RS04660;product=lysine-specific permease;protein_id=WP_000534999.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	39448	41439	.	+	.	ID=gene-C9E94_RS04670;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=C9E94_RS04670;old_locus_tag=C9E94_04795
NZ_PYJR01000039.1	Protein Homology	CDS	39448	41439	.	+	0	ID=cds-WP_000488254.1;Parent=gene-C9E94_RS04670;Dbxref=GenBank:WP_000488254.1;Name=WP_000488254.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461144.1;locus_tag=C9E94_RS04670;product=catecholate siderophore receptor CirA;protein_id=WP_000488254.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	41483	42805	.	-	.	ID=gene-C9E94_RS04675;Name=C9E94_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04675;old_locus_tag=C9E94_04800
NZ_PYJR01000039.1	Protein Homology	CDS	41483	42805	.	-	0	ID=cds-WP_000023807.1;Parent=gene-C9E94_RS04675;Dbxref=GenBank:WP_000023807.1;Name=WP_000023807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461143.1;locus_tag=C9E94_RS04675;product=MFS transporter;protein_id=WP_000023807.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	42838	43725	.	-	.	ID=gene-C9E94_RS04680;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=C9E94_RS04680;old_locus_tag=C9E94_04805
NZ_PYJR01000039.1	Protein Homology	CDS	42838	43725	.	-	0	ID=cds-WP_000022914.1;Parent=gene-C9E94_RS04680;Dbxref=GenBank:WP_000022914.1;Name=WP_000022914.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461142.1;locus_tag=C9E94_RS04680;product=phosphoserine phosphatase SerB;protein_id=WP_000022914.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	43942	45309	.	+	.	ID=gene-C9E94_RS04685;Name=C9E94_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04685;old_locus_tag=C9E94_04810
NZ_PYJR01000039.1	Protein Homology	CDS	43942	45309	.	+	0	ID=cds-WP_001518989.1;Parent=gene-C9E94_RS04685;Dbxref=GenBank:WP_001518989.1;Name=WP_001518989.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461141.1;locus_tag=C9E94_RS04685;product=L-serine ammonia-lyase;protein_id=WP_001518989.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	45314	45703	.	+	.	ID=gene-C9E94_RS04690;Name=C9E94_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04690;old_locus_tag=C9E94_04815
NZ_PYJR01000039.1	Protein Homology	CDS	45314	45703	.	+	0	ID=cds-WP_000876817.1;Parent=gene-C9E94_RS04690;Dbxref=GenBank:WP_000876817.1;Name=WP_000876817.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461140.1;locus_tag=C9E94_RS04690;product=helix-turn-helix domain-containing protein;protein_id=WP_000876817.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	45692	46549	.	-	.	ID=gene-C9E94_RS04695;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=C9E94_RS04695;old_locus_tag=C9E94_04820
NZ_PYJR01000039.1	Protein Homology	CDS	45692	46549	.	-	0	ID=cds-WP_000425491.1;Parent=gene-C9E94_RS04695;Dbxref=GenBank:WP_000425491.1;Name=WP_000425491.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461139.2;locus_tag=C9E94_RS04695;product=S-formylglutathione hydrolase;protein_id=WP_000425491.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	46879	47547	.	+	.	ID=gene-C9E94_RS04700;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=C9E94_RS04700;old_locus_tag=C9E94_04830
NZ_PYJR01000039.1	Protein Homology	CDS	46879	47547	.	+	0	ID=cds-WP_001139611.1;Parent=gene-C9E94_RS04700;Dbxref=GenBank:WP_001139611.1;Name=WP_001139611.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461138.1;locus_tag=C9E94_RS04700;product=GTP cyclohydrolase I FolE;protein_id=WP_001139611.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	47562	48704	.	+	.	ID=gene-C9E94_RS04705;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=C9E94_RS04705;old_locus_tag=C9E94_04835
NZ_PYJR01000039.1	Protein Homology	CDS	47562	48704	.	+	0	ID=cds-WP_094889193.1;Parent=gene-C9E94_RS04705;Dbxref=GenBank:WP_094889193.1;Name=WP_094889193.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461137.1;locus_tag=C9E94_RS04705;product=DUF418 domain-containing protein YeiB;protein_id=WP_094889193.1;transl_table=11
NZ_PYJR01000039.1	RefSeq	gene	48854	49876	.	+	.	ID=gene-C9E94_RS04710;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=C9E94_RS04710;old_locus_tag=C9E94_04840
NZ_PYJR01000039.1	Protein Homology	CDS	48854	49876	.	+	0	ID=cds-WP_000628634.1;Parent=gene-C9E94_RS04710;Dbxref=GenBank:WP_000628634.1;Name=WP_000628634.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461136.1;locus_tag=C9E94_RS04710;product=HTH-type transcriptional regulator GalS;protein_id=WP_000628634.1;transl_table=11
##sequence-region NZ_PYJR01000099.1 1 49178
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000099.1	RefSeq	region	1	49178	.	+	.	ID=NZ_PYJR01000099.1:1..49178;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000099.1	RefSeq	gene	110	1141	.	+	.	ID=gene-C9E94_RS14305;Name=C9E94_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14305;old_locus_tag=C9E94_14635
NZ_PYJR01000099.1	Protein Homology	CDS	110	1141	.	+	0	ID=cds-WP_000710966.1;Parent=gene-C9E94_RS14305;Dbxref=GenBank:WP_000710966.1;Name=WP_000710966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462919.1;locus_tag=C9E94_RS14305;product=YiiG family protein;protein_id=WP_000710966.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	1409	2245	.	-	.	ID=gene-C9E94_RS14310;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=C9E94_RS14310;old_locus_tag=C9E94_14640
NZ_PYJR01000099.1	Protein Homology	CDS	1409	2245	.	-	0	ID=cds-WP_001059739.1;Parent=gene-C9E94_RS14310;Dbxref=GenBank:WP_001059739.1;Name=WP_001059739.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462918.1;locus_tag=C9E94_RS14310;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_001059739.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	2440	5490	.	+	.	ID=gene-C9E94_RS14320;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=C9E94_RS14320;old_locus_tag=C9E94_14650
NZ_PYJR01000099.1	Protein Homology	CDS	2440	5490	.	+	0	ID=cds-WP_077248424.1;Parent=gene-C9E94_RS14320;Dbxref=GenBank:WP_077248424.1;Name=WP_077248424.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=C9E94_RS14320;product=formate dehydrogenase-N subunit alpha;protein_id=WP_077248424.1;transl_except=(pos:3025..3027%2Caa:Sec);transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	5503	6405	.	+	.	ID=gene-C9E94_RS14325;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=C9E94_RS14325;old_locus_tag=C9E94_14655
NZ_PYJR01000099.1	Protein Homology	CDS	5503	6405	.	+	0	ID=cds-WP_000331364.1;Parent=gene-C9E94_RS14325;Dbxref=GenBank:WP_000331364.1;Name=WP_000331364.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462916.1;locus_tag=C9E94_RS14325;product=formate dehydrogenase subunit beta;protein_id=WP_000331364.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	6402	7037	.	+	.	ID=gene-C9E94_RS14330;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=C9E94_RS14330;old_locus_tag=C9E94_14660
NZ_PYJR01000099.1	Protein Homology	CDS	6402	7037	.	+	0	ID=cds-WP_000829025.1;Parent=gene-C9E94_RS14330;Dbxref=GenBank:WP_000829025.1;Name=WP_000829025.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462915.1;locus_tag=C9E94_RS14330;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_000829025.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	7034	7963	.	+	.	ID=gene-C9E94_RS14335;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=C9E94_RS14335;old_locus_tag=C9E94_14665
NZ_PYJR01000099.1	Protein Homology	CDS	7034	7963	.	+	0	ID=cds-WP_000027730.1;Parent=gene-C9E94_RS14335;Dbxref=GenBank:WP_000027730.1;Name=WP_000027730.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=C9E94_RS14335;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_000027730.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	8010	8300	.	-	.	ID=gene-C9E94_RS14340;Name=C9E94_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14340;old_locus_tag=C9E94_14670
NZ_PYJR01000099.1	Protein Homology	CDS	8010	8300	.	-	0	ID=cds-WP_000362050.1;Parent=gene-C9E94_RS14340;Dbxref=GenBank:WP_000362050.1;Name=WP_000362050.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264433.1;locus_tag=C9E94_RS14340;product=helix-turn-helix domain-containing protein;protein_id=WP_000362050.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	8301	8612	.	-	.	ID=gene-C9E94_RS14345;Name=C9E94_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14345;old_locus_tag=C9E94_14675
NZ_PYJR01000099.1	Protein Homology	CDS	8301	8612	.	-	0	ID=cds-WP_001159630.1;Parent=gene-C9E94_RS14345;Dbxref=GenBank:WP_001159630.1;Name=WP_001159630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001159636.1;locus_tag=C9E94_RS14345;product=cytotoxic translational repressor of toxin-antitoxin stability system;protein_id=WP_001159630.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	8830	9744	.	+	.	ID=gene-C9E94_RS14350;Name=C9E94_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14350;old_locus_tag=C9E94_14680
NZ_PYJR01000099.1	Protein Homology	CDS	8830	9744	.	+	0	ID=cds-WP_058145370.1;Parent=gene-C9E94_RS14350;Dbxref=GenBank:WP_058145370.1;Name=WP_058145370.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001127709.1;locus_tag=C9E94_RS14350;product=alpha/beta hydrolase;protein_id=WP_058145370.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	9770	10711	.	-	.	ID=gene-C9E94_RS14355;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=C9E94_RS14355;old_locus_tag=C9E94_14685
NZ_PYJR01000099.1	Protein Homology	CDS	9770	10711	.	-	0	ID=cds-WP_001518251.1;Parent=gene-C9E94_RS14355;Dbxref=GenBank:WP_001518251.1;Name=WP_001518251.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=C9E94_RS14355;product=fatty acid biosynthesis protein FabY;protein_id=WP_001518251.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	10756	11193	.	-	.	ID=gene-C9E94_RS14360;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=C9E94_RS14360;old_locus_tag=C9E94_14690
NZ_PYJR01000099.1	Protein Homology	CDS	10756	11193	.	-	0	ID=cds-WP_000560974.1;Parent=gene-C9E94_RS14360;Dbxref=GenBank:WP_000560974.1;Name=WP_000560974.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=C9E94_RS14360;product=D-aminoacyl-tRNA deacylase;protein_id=WP_000560974.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	11190	12062	.	-	.	ID=gene-C9E94_RS14365;Name=C9E94_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14365;old_locus_tag=C9E94_14695
NZ_PYJR01000099.1	Protein Homology	CDS	11190	12062	.	-	0	ID=cds-WP_000921423.1;Parent=gene-C9E94_RS14365;Dbxref=GenBank:WP_000921423.1;Name=WP_000921423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462907.1;locus_tag=C9E94_RS14365;product=virulence factor BrkB family protein;protein_id=WP_000921423.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	12056	12655	.	-	.	ID=gene-C9E94_RS14370;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=C9E94_RS14370;old_locus_tag=C9E94_14700
NZ_PYJR01000099.1	Protein Homology	CDS	12056	12655	.	-	0	ID=cds-WP_000965702.1;Parent=gene-C9E94_RS14370;Dbxref=GenBank:WP_000965702.1;Name=WP_000965702.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462906.1;locus_tag=C9E94_RS14370;product=glucose-1-phosphatase;protein_id=WP_000965702.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	12846	13649	.	-	.	ID=gene-C9E94_RS14375;Name=C9E94_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14375;old_locus_tag=C9E94_14705
NZ_PYJR01000099.1	Protein Homology	CDS	12846	13649	.	-	0	ID=cds-WP_000059693.1;Parent=gene-C9E94_RS14375;Dbxref=GenBank:WP_000059693.1;Name=WP_000059693.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462905.1;locus_tag=C9E94_RS14375;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000059693.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	13683	14579	.	-	.	ID=gene-C9E94_RS14380;Name=C9E94_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14380;old_locus_tag=C9E94_14710
NZ_PYJR01000099.1	Protein Homology	CDS	13683	14579	.	-	0	ID=cds-WP_024798558.1;Parent=gene-C9E94_RS14380;Dbxref=GenBank:WP_024798558.1;Name=WP_024798558.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462904.3;locus_tag=C9E94_RS14380;product=sugar kinase;protein_id=WP_024798558.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	14744	15640	.	+	.	ID=gene-C9E94_RS14385;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=C9E94_RS14385;old_locus_tag=C9E94_14715
NZ_PYJR01000099.1	Protein Homology	CDS	14744	15640	.	+	0	ID=cds-WP_135401104.1;Parent=gene-C9E94_RS14385;Dbxref=GenBank:WP_135401104.1;Name=WP_135401104.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462903.1;locus_tag=C9E94_RS14385;product=sulfolactaldehyde 3-reductase;protein_id=WP_135401104.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	15663	16541	.	+	.	ID=gene-C9E94_RS14390;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=C9E94_RS14390;old_locus_tag=C9E94_14720
NZ_PYJR01000099.1	Protein Homology	CDS	15663	16541	.	+	0	ID=cds-WP_001067412.1;Parent=gene-C9E94_RS14390;Dbxref=GenBank:WP_001067412.1;Name=WP_001067412.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462902.1;locus_tag=C9E94_RS14390;product=sulfofructosephosphate aldolase;protein_id=WP_001067412.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	16557	17798	.	+	.	ID=gene-C9E94_RS14395;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=C9E94_RS14395;old_locus_tag=C9E94_14725
NZ_PYJR01000099.1	Protein Homology	CDS	16557	17798	.	+	0	ID=cds-WP_058653257.1;Parent=gene-C9E94_RS14395;Dbxref=GenBank:WP_058653257.1;Name=WP_058653257.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312830.1;locus_tag=C9E94_RS14395;product=sulfoquinovose isomerase;protein_id=WP_058653257.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	17870	18772	.	+	.	ID=gene-C9E94_RS14400;Name=C9E94_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14400;old_locus_tag=C9E94_14730
NZ_PYJR01000099.1	Protein Homology	CDS	17870	18772	.	+	0	ID=cds-WP_024131638.1;Parent=gene-C9E94_RS14400;Dbxref=GenBank:WP_024131638.1;Name=WP_024131638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001611165.1;locus_tag=C9E94_RS14400;product=aldose-1-epimerase;protein_id=WP_024131638.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	18861	19736	.	+	.	ID=gene-C9E94_RS14405;Name=C9E94_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14405;old_locus_tag=C9E94_14735
NZ_PYJR01000099.1	Protein Homology	CDS	18861	19736	.	+	0	ID=cds-WP_000345334.1;Parent=gene-C9E94_RS14405;Dbxref=GenBank:WP_000345334.1;Name=WP_000345334.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312828.1;locus_tag=C9E94_RS14405;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000345334.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	19860	21896	.	+	.	ID=gene-C9E94_RS14410;Name=C9E94_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14410;old_locus_tag=C9E94_14740
NZ_PYJR01000099.1	Protein Homology	CDS	19860	21896	.	+	0	ID=cds-WP_058653259.1;Parent=gene-C9E94_RS14410;Dbxref=GenBank:WP_058653259.1;Name=WP_058653259.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523759.1;locus_tag=C9E94_RS14410;product=alpha-glucosidase;protein_id=WP_058653259.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	21942	23324	.	+	.	ID=gene-C9E94_RS14415;Name=C9E94_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14415;old_locus_tag=C9E94_14745
NZ_PYJR01000099.1	Protein Homology	CDS	21942	23324	.	+	0	ID=cds-WP_000084233.1;Parent=gene-C9E94_RS14415;Dbxref=GenBank:WP_000084233.1;Name=WP_000084233.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084232.1;locus_tag=C9E94_RS14415;product=MFS transporter;protein_id=WP_000084233.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	23370	24788	.	+	.	ID=gene-C9E94_RS14420;Name=C9E94_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14420;old_locus_tag=C9E94_14750
NZ_PYJR01000099.1	Protein Homology	CDS	23370	24788	.	+	0	ID=cds-WP_001112785.1;Parent=gene-C9E94_RS14420;Dbxref=GenBank:WP_001112785.1;Name=WP_001112785.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462897.1;locus_tag=C9E94_RS14420;product=MFS transporter;protein_id=WP_001112785.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	24856	25548	.	+	.	ID=gene-C9E94_RS14425;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=C9E94_RS14425;old_locus_tag=C9E94_14755
NZ_PYJR01000099.1	Protein Homology	CDS	24856	25548	.	+	0	ID=cds-WP_000838828.1;Parent=gene-C9E94_RS14425;Dbxref=GenBank:WP_000838828.1;Name=WP_000838828.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462896.1;locus_tag=C9E94_RS14425;product=porin OmpL;protein_id=WP_000838828.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	25705	26553	.	+	.	ID=gene-C9E94_RS14430;Name=C9E94_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14430;old_locus_tag=C9E94_14760
NZ_PYJR01000099.1	Protein Homology	CDS	25705	26553	.	+	0	ID=cds-WP_017465953.1;Parent=gene-C9E94_RS14430;Dbxref=GenBank:WP_017465953.1;Name=WP_017465953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462895.1;locus_tag=C9E94_RS14430;product=STM4015 family protein;protein_id=WP_017465953.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	26566	27591	.	+	.	ID=gene-C9E94_RS14435;Name=C9E94_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14435;old_locus_tag=C9E94_14765
NZ_PYJR01000099.1	Protein Homology	CDS	26566	27591	.	+	0	ID=cds-WP_077918088.1;Parent=gene-C9E94_RS14435;Dbxref=GenBank:WP_077918088.1;Name=WP_077918088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462894.3;locus_tag=C9E94_RS14435;product=STM4014 family protein;protein_id=WP_077918088.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	27584	28459	.	+	.	ID=gene-C9E94_RS14440;Name=C9E94_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14440;old_locus_tag=C9E94_14770
NZ_PYJR01000099.1	Protein Homology	CDS	27584	28459	.	+	0	ID=cds-WP_135401105.1;Parent=gene-C9E94_RS14440;Dbxref=GenBank:WP_135401105.1;Name=WP_135401105.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462893.3;locus_tag=C9E94_RS14440;product=STM4013/SEN3800 family hydrolase;protein_id=WP_135401105.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	28461	29702	.	+	.	ID=gene-C9E94_RS14445;Name=C9E94_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14445;old_locus_tag=C9E94_14775
NZ_PYJR01000099.1	Protein Homology	CDS	28461	29702	.	+	0	ID=cds-WP_045343515.1;Parent=gene-C9E94_RS14445;Dbxref=GenBank:WP_045343515.1;Name=WP_045343515.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462892.1;locus_tag=C9E94_RS14445;product=STM4012 family radical SAM protein;protein_id=WP_045343515.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	29699	30577	.	+	.	ID=gene-C9E94_RS14450;Name=C9E94_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14450;old_locus_tag=C9E94_14780
NZ_PYJR01000099.1	Protein Homology	CDS	29699	30577	.	+	0	ID=cds-WP_080169710.1;Parent=gene-C9E94_RS14450;Dbxref=GenBank:WP_080169710.1;Name=WP_080169710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462891.1;locus_tag=C9E94_RS14450;product=STM4011 family radical SAM protein;protein_id=WP_080169710.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	30562	31296	.	+	.	ID=gene-C9E94_RS14455;Name=C9E94_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14455;old_locus_tag=C9E94_14785
NZ_PYJR01000099.1	Protein Homology	CDS	30562	31296	.	+	0	ID=cds-WP_058653263.1;Parent=gene-C9E94_RS14455;Dbxref=GenBank:WP_058653263.1;Name=WP_058653263.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462890.1;locus_tag=C9E94_RS14455;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_058653263.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	31351	33174	.	-	.	ID=gene-C9E94_RS14460;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=C9E94_RS14460;old_locus_tag=C9E94_14790
NZ_PYJR01000099.1	Protein Homology	CDS	31351	33174	.	-	0	ID=cds-WP_000572064.1;Parent=gene-C9E94_RS14460;Dbxref=GenBank:WP_000572064.1;Name=WP_000572064.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462889.1;locus_tag=C9E94_RS14460;product=ribosome-dependent GTPase TypA;protein_id=WP_000572064.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	33550	34959	.	+	.	ID=gene-C9E94_RS14465;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=C9E94_RS14465;old_locus_tag=C9E94_14800
NZ_PYJR01000099.1	Protein Homology	CDS	33550	34959	.	+	0	ID=cds-WP_001271699.1;Parent=gene-C9E94_RS14465;Dbxref=GenBank:WP_001271699.1;Name=WP_001271699.1;Ontology_term=GO:0006542,GO:0008152,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=C9E94_RS14465;product=glutamate--ammonia ligase;protein_id=WP_001271699.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	35234	36283	.	+	.	ID=gene-C9E94_RS14475;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=C9E94_RS14475;old_locus_tag=C9E94_14810
NZ_PYJR01000099.1	Protein Homology	CDS	35234	36283	.	+	0	ID=cds-WP_000146194.1;Parent=gene-C9E94_RS14475;Dbxref=GenBank:WP_000146194.1;Name=WP_000146194.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462886.1;locus_tag=C9E94_RS14475;product=nitrogen regulation protein NR(II);protein_id=WP_000146194.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	36292	37701	.	+	.	ID=gene-C9E94_RS14480;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=C9E94_RS14480;old_locus_tag=C9E94_14815
NZ_PYJR01000099.1	Protein Homology	CDS	36292	37701	.	+	0	ID=cds-WP_001188783.1;Parent=gene-C9E94_RS14480;Dbxref=GenBank:WP_001188783.1;Name=WP_001188783.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=C9E94_RS14480;product=nitrogen regulation protein NR(I);protein_id=WP_001188783.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	37814	37924	.	+	.	ID=gene-C9E94_RS14485;Name=C9E94_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14485;old_locus_tag=C9E94_14820
NZ_PYJR01000099.1	Protein Homology	CDS	37814	37924	.	+	0	ID=cds-WP_001578131.1;Parent=gene-C9E94_RS14485;Dbxref=GenBank:WP_001578131.1;Name=WP_001578131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=C9E94_RS14485;product=YshB family small membrane protein;protein_id=WP_001578131.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	38014	39387	.	-	.	ID=gene-C9E94_RS14490;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=C9E94_RS14490;old_locus_tag=C9E94_14825
NZ_PYJR01000099.1	Protein Homology	CDS	38014	39387	.	-	0	ID=cds-WP_000003520.1;Parent=gene-C9E94_RS14490;Dbxref=GenBank:WP_000003520.1;Name=WP_000003520.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462884.1;locus_tag=C9E94_RS14490;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_000003520.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	39576	40091	.	-	.	ID=gene-C9E94_RS14495;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=C9E94_RS14495;old_locus_tag=C9E94_14830
NZ_PYJR01000099.1	Protein Homology	CDS	39576	40091	.	-	0	ID=cds-WP_000743292.1;Parent=gene-C9E94_RS14495;Dbxref=GenBank:WP_000743292.1;Name=WP_000743292.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462883.1;locus_tag=C9E94_RS14495;product=Der GTPase-activating protein YihI;protein_id=WP_000743292.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	40210	40434	.	-	.	ID=gene-C9E94_RS14500;Name=C9E94_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14500;old_locus_tag=C9E94_14835
NZ_PYJR01000099.1	Protein Homology	CDS	40210	40434	.	-	0	ID=cds-WP_001541209.1;Parent=gene-C9E94_RS14500;Dbxref=GenBank:WP_001541209.1;Name=WP_001541209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462882.1;locus_tag=C9E94_RS14500;product=hypothetical protein;protein_id=WP_001541209.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	40674	41306	.	+	.	ID=gene-C9E94_RS14505;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=C9E94_RS14505;old_locus_tag=C9E94_14840
NZ_PYJR01000099.1	Protein Homology	CDS	40674	41306	.	+	0	ID=cds-WP_000183331.1;Parent=gene-C9E94_RS14505;Dbxref=GenBank:WP_000183331.1;Name=WP_000183331.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462881.1;locus_tag=C9E94_RS14505;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_000183331.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	41427	41474	.	-	.	ID=gene-C9E94_RS23915;Name=C9E94_RS23915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23915
NZ_PYJR01000099.1	Protein Homology	CDS	41427	41474	.	-	0	ID=cds-WP_071892919.1;Parent=gene-C9E94_RS23915;Dbxref=GenBank:WP_071892919.1;Name=WP_071892919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_013606034.1;locus_tag=C9E94_RS23915;product=spot 42 RNA%2C inhibition of DNA synthesis;protein_id=WP_071892919.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	41641	44427	.	-	.	ID=gene-C9E94_RS14510;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=C9E94_RS14510;old_locus_tag=C9E94_14845
NZ_PYJR01000099.1	Protein Homology	CDS	41641	44427	.	-	0	ID=cds-WP_001749213.1;Parent=gene-C9E94_RS14510;Dbxref=GenBank:WP_001749213.1;Name=WP_001749213.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462879.1;locus_tag=C9E94_RS14510;product=DNA polymerase I;protein_id=WP_001749213.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	44815	45723	.	+	.	ID=gene-C9E94_RS14520;Name=C9E94_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14520;old_locus_tag=C9E94_14855
NZ_PYJR01000099.1	Protein Homology	CDS	44815	45723	.	+	0	ID=cds-WP_094889301.1;Parent=gene-C9E94_RS14520;Dbxref=GenBank:WP_094889301.1;Name=WP_094889301.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462878.1;locus_tag=C9E94_RS14520;product=acyltransferase;protein_id=WP_094889301.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	45736	46359	.	-	.	ID=gene-C9E94_RS14525;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=C9E94_RS14525;old_locus_tag=C9E94_14860
NZ_PYJR01000099.1	Protein Homology	CDS	45736	46359	.	-	0	ID=cds-WP_000725364.1;Parent=gene-C9E94_RS14525;Dbxref=GenBank:WP_000725364.1;Name=WP_000725364.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462877.1;locus_tag=C9E94_RS14525;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725364.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	46376	47362	.	-	.	ID=gene-C9E94_RS14530;Name=C9E94_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14530;old_locus_tag=C9E94_14865
NZ_PYJR01000099.1	Protein Homology	CDS	46376	47362	.	-	0	ID=cds-WP_000999264.1;Parent=gene-C9E94_RS14530;Dbxref=GenBank:WP_000999264.1;Name=WP_000999264.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462876.1;locus_tag=C9E94_RS14530;product=serine/threonine protein kinase;protein_id=WP_000999264.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	47439	47708	.	-	.	ID=gene-C9E94_RS14535;Name=C9E94_RS14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14535;old_locus_tag=C9E94_14870
NZ_PYJR01000099.1	Protein Homology	CDS	47439	47708	.	-	0	ID=cds-WP_000649858.1;Parent=gene-C9E94_RS14535;Dbxref=GenBank:WP_000649858.1;Name=WP_000649858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=C9E94_RS14535;product=YihD family protein;protein_id=WP_000649858.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	47778	48362	.	+	.	ID=gene-C9E94_RS14540;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=C9E94_RS14540;old_locus_tag=C9E94_14875
NZ_PYJR01000099.1	Protein Homology	CDS	47778	48362	.	+	0	ID=cds-WP_001046890.1;Parent=gene-C9E94_RS14540;Dbxref=GenBank:WP_001046890.1;Name=WP_001046890.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462874.1;locus_tag=C9E94_RS14540;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_001046890.1;transl_table=11
NZ_PYJR01000099.1	RefSeq	gene	48359	48874	.	+	.	ID=gene-C9E94_RS14545;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=C9E94_RS14545;old_locus_tag=C9E94_14880
NZ_PYJR01000099.1	Protein Homology	CDS	48359	48874	.	+	0	ID=cds-WP_012543414.1;Parent=gene-C9E94_RS14545;Dbxref=GenBank:WP_012543414.1;Name=WP_012543414.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462873.1;locus_tag=C9E94_RS14545;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_012543414.1;transl_table=11
##sequence-region NZ_PYJR01000072.1 1 48036
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000072.1	RefSeq	region	1	48036	.	+	.	ID=NZ_PYJR01000072.1:1..48036;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000072.1	RefSeq	pseudogene	177	1367	.	+	.	ID=gene-C9E94_RS09305;Name=C9E94_RS09305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS09305;old_locus_tag=C9E94_09515;pseudo=true
NZ_PYJR01000072.1	Protein Homology	CDS	177	1367	.	+	0	ID=cds-C9E94_RS09305;Parent=gene-C9E94_RS09305;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005176946.1;locus_tag=C9E94_RS09305;product=IS256 family transposase;pseudo=true;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	1682	2080	.	+	.	ID=gene-C9E94_RS09310;Name=C9E94_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09310;old_locus_tag=C9E94_09520
NZ_PYJR01000072.1	Protein Homology	CDS	1682	2080	.	+	0	ID=cds-WP_000766837.1;Parent=gene-C9E94_RS09310;Dbxref=GenBank:WP_000766837.1;Name=WP_000766837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459330.1;locus_tag=C9E94_RS09310;product=outer membrane protein;protein_id=WP_000766837.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	2127	2885	.	-	.	ID=gene-C9E94_RS09315;Name=stbE;gbkey=Gene;gene=stbE;gene_biotype=protein_coding;locus_tag=C9E94_RS09315;old_locus_tag=C9E94_09525
NZ_PYJR01000072.1	Protein Homology	CDS	2127	2885	.	-	0	ID=cds-WP_079960031.1;Parent=gene-C9E94_RS09315;Dbxref=GenBank:WP_079960031.1;Name=WP_079960031.1;gbkey=CDS;gene=stbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459331.1;locus_tag=C9E94_RS09315;product=fimbrial biogenesis chaperone StbE;protein_id=WP_079960031.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	2851	4176	.	-	.	ID=gene-C9E94_RS09320;Name=stbD;gbkey=Gene;gene=stbD;gene_biotype=protein_coding;locus_tag=C9E94_RS09320;old_locus_tag=C9E94_09530
NZ_PYJR01000072.1	Protein Homology	CDS	2851	4176	.	-	0	ID=cds-WP_023221527.1;Parent=gene-C9E94_RS09320;Dbxref=GenBank:WP_023221527.1;Name=WP_023221527.1;gbkey=CDS;gene=stbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=C9E94_RS09320;product=fimbrial usher protein StbD;protein_id=WP_023221527.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	4181	6742	.	-	.	ID=gene-C9E94_RS09325;Name=C9E94_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09325;old_locus_tag=C9E94_09535
NZ_PYJR01000072.1	Protein Homology	CDS	4181	6742	.	-	0	ID=cds-WP_135400958.1;Parent=gene-C9E94_RS09325;Dbxref=GenBank:WP_135400958.1;Name=WP_135400958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459333.1;locus_tag=C9E94_RS09325;product=fimbrial outer membrane usher protein;protein_id=WP_135400958.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	6726	7487	.	-	.	ID=gene-C9E94_RS09330;Name=stbB;gbkey=Gene;gene=stbB;gene_biotype=protein_coding;locus_tag=C9E94_RS09330;old_locus_tag=C9E94_09540
NZ_PYJR01000072.1	Protein Homology	CDS	6726	7487	.	-	0	ID=cds-WP_000781495.1;Parent=gene-C9E94_RS09330;Dbxref=GenBank:WP_000781495.1;Name=WP_000781495.1;gbkey=CDS;gene=stbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459334.1;locus_tag=C9E94_RS09330;product=fimbrial biogenesis chaperone StbB;protein_id=WP_000781495.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	7549	8085	.	-	.	ID=gene-C9E94_RS09335;Name=C9E94_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09335;old_locus_tag=C9E94_09545
NZ_PYJR01000072.1	Protein Homology	CDS	7549	8085	.	-	0	ID=cds-WP_000062035.1;Parent=gene-C9E94_RS09335;Dbxref=GenBank:WP_000062035.1;Name=WP_000062035.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459335.1;locus_tag=C9E94_RS09335;product=fimbrial protein;protein_id=WP_000062035.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	8749	9483	.	+	.	ID=gene-C9E94_RS09340;Name=C9E94_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09340;old_locus_tag=C9E94_09555
NZ_PYJR01000072.1	Protein Homology	CDS	8749	9483	.	+	0	ID=cds-WP_023137646.1;Parent=gene-C9E94_RS09340;Dbxref=GenBank:WP_023137646.1;Name=WP_023137646.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005860.1;locus_tag=C9E94_RS09340;product=winged helix-turn-helix domain-containing protein;protein_id=WP_023137646.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	pseudogene	9456	9756	.	+	.	ID=gene-C9E94_RS09345;Name=C9E94_RS09345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS09345;old_locus_tag=C9E94_09560;pseudo=true
NZ_PYJR01000072.1	Protein Homology	CDS	9456	9756	.	+	0	ID=cds-C9E94_RS09345;Parent=gene-C9E94_RS09345;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459337.1;locus_tag=C9E94_RS09345;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	10256	11830	.	+	.	ID=gene-C9E94_RS09350;Name=C9E94_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09350;old_locus_tag=C9E94_09570
NZ_PYJR01000072.1	Protein Homology	CDS	10256	11830	.	+	0	ID=cds-WP_135400959.1;Parent=gene-C9E94_RS09350;Dbxref=GenBank:WP_135400959.1;Name=WP_135400959.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459338.1;locus_tag=C9E94_RS09350;product=EAL domain-containing protein;protein_id=WP_135400959.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	11930	12673	.	+	.	ID=gene-C9E94_RS09355;Name=C9E94_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09355;old_locus_tag=C9E94_09575
NZ_PYJR01000072.1	Protein Homology	CDS	11930	12673	.	+	0	ID=cds-WP_000081368.1;Parent=gene-C9E94_RS09355;Dbxref=GenBank:WP_000081368.1;Name=WP_000081368.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459339.1;locus_tag=C9E94_RS09355;product=transcriptional regulator;protein_id=WP_000081368.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	12646	13134	.	+	.	ID=gene-C9E94_RS09360;Name=C9E94_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09360;old_locus_tag=C9E94_09580
NZ_PYJR01000072.1	Protein Homology	CDS	12646	13134	.	+	0	ID=cds-WP_000545415.1;Parent=gene-C9E94_RS09360;Dbxref=GenBank:WP_000545415.1;Name=WP_000545415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459340.1;locus_tag=C9E94_RS09360;product=hypothetical protein;protein_id=WP_000545415.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	13536	14060	.	+	.	ID=gene-C9E94_RS09365;Name=C9E94_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09365;old_locus_tag=C9E94_09585
NZ_PYJR01000072.1	Protein Homology	CDS	13536	14060	.	+	0	ID=cds-WP_000830239.1;Parent=gene-C9E94_RS09365;Dbxref=GenBank:WP_000830239.1;Name=WP_000830239.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459341.1;locus_tag=C9E94_RS09365;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_000830239.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	14204	14845	.	+	.	ID=gene-C9E94_RS09370;Name=C9E94_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09370;old_locus_tag=C9E94_09590
NZ_PYJR01000072.1	Protein Homology	CDS	14204	14845	.	+	0	ID=cds-WP_000610827.1;Parent=gene-C9E94_RS09370;Dbxref=GenBank:WP_000610827.1;Name=WP_000610827.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459342.1;locus_tag=C9E94_RS09370;product=helix-turn-helix transcriptional regulator;protein_id=WP_000610827.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	14856	15080	.	+	.	ID=gene-C9E94_RS09375;Name=C9E94_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09375;old_locus_tag=C9E94_09595
NZ_PYJR01000072.1	Protein Homology	CDS	14856	15080	.	+	0	ID=cds-WP_000737127.1;Parent=gene-C9E94_RS09375;Dbxref=GenBank:WP_000737127.1;Name=WP_000737127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459343.1;locus_tag=C9E94_RS09375;product=membrane protein;protein_id=WP_000737127.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	15138	15497	.	+	.	ID=gene-C9E94_RS09380;Name=C9E94_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09380;old_locus_tag=C9E94_09600
NZ_PYJR01000072.1	Protein Homology	CDS	15138	15497	.	+	0	ID=cds-WP_000722978.1;Parent=gene-C9E94_RS09380;Dbxref=GenBank:WP_000722978.1;Name=WP_000722978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459344.1;locus_tag=C9E94_RS09380;product=DUF4156 domain-containing protein;protein_id=WP_000722978.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	15567	17024	.	-	.	ID=gene-C9E94_RS09385;Name=mdsC;gbkey=Gene;gene=mdsC;gene_biotype=protein_coding;locus_tag=C9E94_RS09385;old_locus_tag=C9E94_09605
NZ_PYJR01000072.1	Protein Homology	CDS	15567	17024	.	-	0	ID=cds-WP_135400960.1;Parent=gene-C9E94_RS09385;Dbxref=GenBank:WP_135400960.1;Name=WP_135400960.1;gbkey=CDS;gene=mdsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521068.1;locus_tag=C9E94_RS09385;product=multidrug efflux transporter outer membrane subunit MdsC;protein_id=WP_135400960.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	17041	20208	.	-	.	ID=gene-C9E94_RS09390;Name=mdsB;gbkey=Gene;gene=mdsB;gene_biotype=protein_coding;locus_tag=C9E94_RS09390;old_locus_tag=C9E94_09610
NZ_PYJR01000072.1	Protein Homology	CDS	17041	20208	.	-	0	ID=cds-WP_135400961.1;Parent=gene-C9E94_RS09390;Dbxref=GenBank:WP_135400961.1;Name=WP_135400961.1;gbkey=CDS;gene=mdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=C9E94_RS09390;product=multidrug efflux RND transporter permease subunit MdsB;protein_id=WP_135400961.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	20205	21431	.	-	.	ID=gene-C9E94_RS09395;Name=mdsA;gbkey=Gene;gene=mdsA;gene_biotype=protein_coding;locus_tag=C9E94_RS09395;old_locus_tag=C9E94_09615
NZ_PYJR01000072.1	Protein Homology	CDS	20205	21431	.	-	0	ID=cds-WP_135400962.1;Parent=gene-C9E94_RS09395;Dbxref=GenBank:WP_135400962.1;Name=WP_135400962.1;gbkey=CDS;gene=mdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459347.3;locus_tag=C9E94_RS09395;product=multidrug efflux RND transporter periplasmic adaptor subunit MdsA;protein_id=WP_135400962.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	21708	23996	.	+	.	ID=gene-C9E94_RS09400;Name=golT;gbkey=Gene;gene=golT;gene_biotype=protein_coding;locus_tag=C9E94_RS09400;old_locus_tag=C9E94_09620
NZ_PYJR01000072.1	Protein Homology	CDS	21708	23996	.	+	0	ID=cds-WP_000083318.1;Parent=gene-C9E94_RS09400;Dbxref=GenBank:WP_000083318.1;Name=WP_000083318.1;gbkey=CDS;gene=golT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083318.1;locus_tag=C9E94_RS09400;product=gold/copper-translocating P-type ATPase GolT;protein_id=WP_000083318.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	24008	24472	.	+	.	ID=gene-C9E94_RS09405;Name=golS;gbkey=Gene;gene=golS;gene_biotype=protein_coding;locus_tag=C9E94_RS09405;old_locus_tag=C9E94_09625
NZ_PYJR01000072.1	Protein Homology	CDS	24008	24472	.	+	0	ID=cds-WP_001020583.1;Parent=gene-C9E94_RS09405;Dbxref=GenBank:WP_001020583.1;Name=WP_001020583.1;gbkey=CDS;gene=golS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459349.1;locus_tag=C9E94_RS09405;product=Au(I) sensor transcriptional regulator GolS;protein_id=WP_001020583.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	24550	24744	.	+	.	ID=gene-C9E94_RS09410;Name=golB;gbkey=Gene;gene=golB;gene_biotype=protein_coding;locus_tag=C9E94_RS09410;old_locus_tag=C9E94_09630
NZ_PYJR01000072.1	Protein Homology	CDS	24550	24744	.	+	0	ID=cds-WP_001159470.1;Parent=gene-C9E94_RS09410;Dbxref=GenBank:WP_001159470.1;Name=WP_001159470.1;gbkey=CDS;gene=golB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459350.1;locus_tag=C9E94_RS09410;product=gold resistance metallochaperone GolB;protein_id=WP_001159470.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	25037	26290	.	+	.	ID=gene-C9E94_RS09415;Name=C9E94_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09415;old_locus_tag=C9E94_09635
NZ_PYJR01000072.1	Protein Homology	CDS	25037	26290	.	+	0	ID=cds-WP_024792610.1;Parent=gene-C9E94_RS09415;Dbxref=GenBank:WP_024792610.1;Name=WP_024792610.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459351.1;locus_tag=C9E94_RS09415;product=MFS transporter;protein_id=WP_024792610.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	26479	28437	.	+	.	ID=gene-C9E94_RS09420;Name=C9E94_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09420;old_locus_tag=C9E94_09640
NZ_PYJR01000072.1	Protein Homology	CDS	26479	28437	.	+	0	ID=cds-WP_017465395.1;Parent=gene-C9E94_RS09420;Dbxref=GenBank:WP_017465395.1;Name=WP_017465395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459352.1;locus_tag=C9E94_RS09420;product=site-specific DNA-methyltransferase;protein_id=WP_017465395.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	28447	31419	.	+	.	ID=gene-C9E94_RS09425;Name=C9E94_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09425;old_locus_tag=C9E94_09645
NZ_PYJR01000072.1	Protein Homology	CDS	28447	31419	.	+	0	ID=cds-WP_077914356.1;Parent=gene-C9E94_RS09425;Dbxref=GenBank:WP_077914356.1;Name=WP_077914356.1;Ontology_term=GO:0003677,GO:0016788;gbkey=CDS;go_function=DNA binding|0003677||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=C9E94_RS09425;product=type III restriction-modification system endonuclease;protein_id=WP_077914356.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	31696	31797	.	+	.	ID=gene-C9E94_RS09430;Name=ssaA;gbkey=Gene;gene=ssaA;gene_biotype=protein_coding;locus_tag=C9E94_RS09430;old_locus_tag=C9E94_09650
NZ_PYJR01000072.1	Protein Homology	CDS	31696	31797	.	+	0	ID=cds-WP_000934834.1;Parent=gene-C9E94_RS09430;Dbxref=GenBank:WP_000934834.1;Name=WP_000934834.1;gbkey=CDS;gene=ssaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459354.1;locus_tag=C9E94_RS09430;product=small effector SsaA;protein_id=WP_000934834.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	31914	33317	.	+	.	ID=gene-C9E94_RS09435;Name=C9E94_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09435;old_locus_tag=C9E94_09655
NZ_PYJR01000072.1	Protein Homology	CDS	31914	33317	.	+	0	ID=cds-WP_135400963.1;Parent=gene-C9E94_RS09435;Dbxref=GenBank:WP_135400963.1;Name=WP_135400963.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459355.1;locus_tag=C9E94_RS09435;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_135400963.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	33314	34324	.	+	.	ID=gene-C9E94_RS09440;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=C9E94_RS09440;old_locus_tag=C9E94_09660
NZ_PYJR01000072.1	Protein Homology	CDS	33314	34324	.	+	0	ID=cds-WP_000151038.1;Parent=gene-C9E94_RS09440;Dbxref=GenBank:WP_000151038.1;Name=WP_000151038.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459356.1;locus_tag=C9E94_RS09440;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000151038.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	34270	34455	.	+	.	ID=gene-C9E94_RS09445;Name=C9E94_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09445;old_locus_tag=C9E94_09665
NZ_PYJR01000072.1	Protein Homology	CDS	34270	34455	.	+	0	ID=cds-WP_305954967.1;Parent=gene-C9E94_RS09445;Dbxref=GenBank:WP_305954967.1;Name=WP_305954967.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022085.6;locus_tag=C9E94_RS09445;product=DUF2474 domain-containing protein;protein_id=WP_305954967.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	34374	34565	.	+	.	ID=gene-C9E94_RS23800;Name=C9E94_RS23800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23800
NZ_PYJR01000072.1	Protein Homology	CDS	34374	34565	.	+	0	ID=cds-WP_229023495.1;Parent=gene-C9E94_RS23800;Dbxref=GenBank:WP_229023495.1;Name=WP_229023495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459357.3;locus_tag=C9E94_RS23800;product=hypothetical protein;protein_id=WP_229023495.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	34661	35665	.	+	.	ID=gene-C9E94_RS09450;Name=foxR;gbkey=Gene;gene=foxR;gene_biotype=protein_coding;locus_tag=C9E94_RS09450;old_locus_tag=C9E94_09670
NZ_PYJR01000072.1	Protein Homology	CDS	34661	35665	.	+	0	ID=cds-WP_000074593.1;Parent=gene-C9E94_RS09450;Dbxref=GenBank:WP_000074593.1;Name=WP_000074593.1;gbkey=CDS;gene=foxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459358.1;locus_tag=C9E94_RS09450;product=ferrioxamine uptake transcriptional regulator FoxR;protein_id=WP_000074593.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	35811	37919	.	+	.	ID=gene-C9E94_RS09455;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=C9E94_RS09455;old_locus_tag=C9E94_09675
NZ_PYJR01000072.1	Protein Homology	CDS	35811	37919	.	+	0	ID=cds-WP_135400964.1;Parent=gene-C9E94_RS09455;Dbxref=GenBank:WP_135400964.1;Name=WP_135400964.1;Ontology_term=GO:0015344,GO:0038023;gbkey=CDS;gene=foxA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=C9E94_RS09455;product=ferrioxamine B receptor FoxA;protein_id=WP_135400964.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	37958	38590	.	-	.	ID=gene-C9E94_RS09460;Name=C9E94_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09460;old_locus_tag=C9E94_09680
NZ_PYJR01000072.1	Protein Homology	CDS	37958	38590	.	-	0	ID=cds-WP_000433131.1;Parent=gene-C9E94_RS09460;Dbxref=GenBank:WP_000433131.1;Name=WP_000433131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459360.1;locus_tag=C9E94_RS09460;product=LysE family transporter;protein_id=WP_000433131.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	38822	39097	.	+	.	ID=gene-C9E94_RS09465;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=C9E94_RS09465;old_locus_tag=C9E94_09685
NZ_PYJR01000072.1	Protein Homology	CDS	38822	39097	.	+	0	ID=cds-WP_000848026.1;Parent=gene-C9E94_RS09465;Dbxref=GenBank:WP_000848026.1;Name=WP_000848026.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459361.1;locus_tag=C9E94_RS09465;product=DUF1471 family periplasmic protein YahO;protein_id=WP_000848026.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	39233	40858	.	-	.	ID=gene-C9E94_RS09470;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=C9E94_RS09470;old_locus_tag=C9E94_09690
NZ_PYJR01000072.1	Protein Homology	CDS	39233	40858	.	-	0	ID=cds-WP_134942199.1;Parent=gene-C9E94_RS09470;Dbxref=GenBank:WP_134942199.1;Name=WP_134942199.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459362.1;locus_tag=C9E94_RS09470;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_134942199.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	41124	42011	.	+	.	ID=gene-C9E94_RS09475;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=C9E94_RS09475;old_locus_tag=C9E94_09695
NZ_PYJR01000072.1	Protein Homology	CDS	41124	42011	.	+	0	ID=cds-WP_135400965.1;Parent=gene-C9E94_RS09475;Dbxref=GenBank:WP_135400965.1;Name=WP_135400965.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459363.1;locus_tag=C9E94_RS09475;product=methylisocitrate lyase;protein_id=WP_135400965.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	42134	43303	.	+	.	ID=gene-C9E94_RS09480;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=C9E94_RS09480;old_locus_tag=C9E94_09700
NZ_PYJR01000072.1	Protein Homology	CDS	42134	43303	.	+	0	ID=cds-WP_023219099.1;Parent=gene-C9E94_RS09480;Dbxref=GenBank:WP_023219099.1;Name=WP_023219099.1;Ontology_term=GO:0019679,GO:0036440,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate synthase activity|0036440||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459364.1;locus_tag=C9E94_RS09480;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_023219099.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	43341	44792	.	+	.	ID=gene-C9E94_RS09485;Name=C9E94_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09485;old_locus_tag=C9E94_09705
NZ_PYJR01000072.1	Protein Homology	CDS	43341	44792	.	+	0	ID=cds-WP_001272696.1;Parent=gene-C9E94_RS09485;Dbxref=GenBank:WP_001272696.1;Name=WP_001272696.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459365.1;locus_tag=C9E94_RS09485;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WP_001272696.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	44833	46719	.	+	.	ID=gene-C9E94_RS09490;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=C9E94_RS09490;old_locus_tag=C9E94_09710
NZ_PYJR01000072.1	Protein Homology	CDS	44833	46719	.	+	0	ID=cds-WP_061383687.1;Parent=gene-C9E94_RS09490;Dbxref=GenBank:WP_061383687.1;Name=WP_061383687.1;Ontology_term=GO:0019629,GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459366.1;locus_tag=C9E94_RS09490;product=propionate--CoA ligase;protein_id=WP_061383687.1;transl_table=11
NZ_PYJR01000072.1	RefSeq	gene	46823	47797	.	-	.	ID=gene-C9E94_RS09495;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=C9E94_RS09495;old_locus_tag=C9E94_09715
NZ_PYJR01000072.1	Protein Homology	CDS	46823	47797	.	-	0	ID=cds-WP_000130724.1;Parent=gene-C9E94_RS09495;Dbxref=GenBank:WP_000130724.1;Name=WP_000130724.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459367.1;locus_tag=C9E94_RS09495;product=porphobilinogen synthase;protein_id=WP_000130724.1;transl_table=11
##sequence-region NZ_PYJR01000141.1 1 47594
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000141.1	RefSeq	region	1	47594	.	+	.	ID=NZ_PYJR01000141.1:1..47594;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000141.1	RefSeq	pseudogene	1	803	.	+	.	ID=gene-C9E94_RS22980;Name=C9E94_RS22980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS22980;old_locus_tag=C9E94_23580;partial=true;pseudo=true;start_range=.,1
NZ_PYJR01000141.1	Protein Homology	CDS	1	803	.	+	2	ID=cds-C9E94_RS22980;Parent=gene-C9E94_RS22980;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015847871.1;locus_tag=C9E94_RS22980;partial=true;product=AAA family ATPase;pseudo=true;start_range=.,1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	889	1731	.	+	.	ID=gene-C9E94_RS22985;Name=C9E94_RS22985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22985;old_locus_tag=C9E94_23585
NZ_PYJR01000141.1	Protein Homology	CDS	889	1731	.	+	0	ID=cds-WP_087605478.1;Parent=gene-C9E94_RS22985;Dbxref=GenBank:WP_087605478.1;Name=WP_087605478.1;Ontology_term=GO:0032775,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015847870.1;locus_tag=C9E94_RS22985;product=DNA adenine methylase;protein_id=WP_087605478.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	2025	2423	.	+	.	ID=gene-C9E94_RS22990;Name=C9E94_RS22990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22990;old_locus_tag=C9E94_23590
NZ_PYJR01000141.1	Protein Homology	CDS	2025	2423	.	+	0	ID=cds-WP_135401256.1;Parent=gene-C9E94_RS22990;Dbxref=GenBank:WP_135401256.1;Name=WP_135401256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000672509.1;locus_tag=C9E94_RS22990;product=TIGR03757 family integrating conjugative element protein;protein_id=WP_135401256.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	2423	3373	.	+	.	ID=gene-C9E94_RS22995;Name=C9E94_RS22995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22995;old_locus_tag=C9E94_23595
NZ_PYJR01000141.1	Protein Homology	CDS	2423	3373	.	+	0	ID=cds-WP_255123411.1;Parent=gene-C9E94_RS22995;Dbxref=GenBank:WP_255123411.1;Name=WP_255123411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014640262.1;locus_tag=C9E94_RS22995;product=TIGR03756 family integrating conjugative element protein;protein_id=WP_255123411.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	3388	4803	.	+	.	ID=gene-C9E94_RS23000;Name=C9E94_RS23000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23000;old_locus_tag=C9E94_23600
NZ_PYJR01000141.1	Protein Homology	CDS	3388	4803	.	+	0	ID=cds-WP_135401258.1;Parent=gene-C9E94_RS23000;Dbxref=GenBank:WP_135401258.1;Name=WP_135401258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066800.1;locus_tag=C9E94_RS23000;product=integrating conjugative element protein;protein_id=WP_135401258.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	4805	5137	.	+	.	ID=gene-C9E94_RS23005;Name=C9E94_RS23005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23005;old_locus_tag=C9E94_23605
NZ_PYJR01000141.1	Protein Homology	CDS	4805	5137	.	+	0	ID=cds-WP_135401259.1;Parent=gene-C9E94_RS23005;Dbxref=GenBank:WP_135401259.1;Name=WP_135401259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000382610.1;locus_tag=C9E94_RS23005;product=hypothetical protein;protein_id=WP_135401259.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	5137	6666	.	+	.	ID=gene-C9E94_RS23010;Name=C9E94_RS23010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23010;old_locus_tag=C9E94_23610
NZ_PYJR01000141.1	Protein Homology	CDS	5137	6666	.	+	0	ID=cds-WP_135401260.1;Parent=gene-C9E94_RS23010;Dbxref=GenBank:WP_135401260.1;Name=WP_135401260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000123101.1;locus_tag=C9E94_RS23010;product=conjugal transfer protein TraG N-terminal domain-containing protein;protein_id=WP_135401260.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	6710	6940	.	-	.	ID=gene-C9E94_RS23015;Name=C9E94_RS23015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23015;old_locus_tag=C9E94_23615
NZ_PYJR01000141.1	GeneMarkS-2+	CDS	6710	6940	.	-	0	ID=cds-WP_000654341.1;Parent=gene-C9E94_RS23015;Dbxref=GenBank:WP_000654341.1;Name=WP_000654341.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS23015;product=hypothetical protein;protein_id=WP_000654341.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	7097	7894	.	-	.	ID=gene-C9E94_RS23020;Name=C9E94_RS23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23020;old_locus_tag=C9E94_23620
NZ_PYJR01000141.1	GeneMarkS-2+	CDS	7097	7894	.	-	0	ID=cds-WP_135401261.1;Parent=gene-C9E94_RS23020;Dbxref=GenBank:WP_135401261.1;Name=WP_135401261.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS23020;product=hypothetical protein;protein_id=WP_135401261.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	8979	9896	.	+	.	ID=gene-C9E94_RS23025;Name=C9E94_RS23025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23025;old_locus_tag=C9E94_23625
NZ_PYJR01000141.1	Protein Homology	CDS	8979	9896	.	+	0	ID=cds-WP_135401262.1;Parent=gene-C9E94_RS23025;Dbxref=GenBank:WP_135401262.1;Name=WP_135401262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001129734.1;locus_tag=C9E94_RS23025;product=integrase domain-containing protein;protein_id=WP_135401262.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	10280	10564	.	+	.	ID=gene-C9E94_RS23030;Name=C9E94_RS23030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23030;old_locus_tag=C9E94_23630
NZ_PYJR01000141.1	Protein Homology	CDS	10280	10564	.	+	0	ID=cds-WP_001016291.1;Parent=gene-C9E94_RS23030;Dbxref=GenBank:WP_001016291.1;Name=WP_001016291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001016291.1;locus_tag=C9E94_RS23030;product=hypothetical protein;protein_id=WP_001016291.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	10701	10982	.	+	.	ID=gene-C9E94_RS23035;Name=C9E94_RS23035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23035;old_locus_tag=C9E94_23635
NZ_PYJR01000141.1	Protein Homology	CDS	10701	10982	.	+	0	ID=cds-WP_000184920.1;Parent=gene-C9E94_RS23035;Dbxref=GenBank:WP_000184920.1;Name=WP_000184920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000184920.1;locus_tag=C9E94_RS23035;product=hypothetical protein;protein_id=WP_000184920.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	10986	11180	.	+	.	ID=gene-C9E94_RS23040;Name=C9E94_RS23040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23040;old_locus_tag=C9E94_23640
NZ_PYJR01000141.1	Protein Homology	CDS	10986	11180	.	+	0	ID=cds-WP_135401263.1;Parent=gene-C9E94_RS23040;Dbxref=GenBank:WP_135401263.1;Name=WP_135401263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000701593.1;locus_tag=C9E94_RS23040;product=DUF7706 family protein;protein_id=WP_135401263.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	11256	11528	.	+	.	ID=gene-C9E94_RS23045;Name=C9E94_RS23045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23045;old_locus_tag=C9E94_23645
NZ_PYJR01000141.1	Protein Homology	CDS	11256	11528	.	+	0	ID=cds-WP_058331705.1;Parent=gene-C9E94_RS23045;Dbxref=GenBank:WP_058331705.1;Name=WP_058331705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000202245.1;locus_tag=C9E94_RS23045;product=hypothetical protein;protein_id=WP_058331705.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	11521	11949	.	+	.	ID=gene-C9E94_RS23050;Name=C9E94_RS23050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23050;old_locus_tag=C9E94_23650
NZ_PYJR01000141.1	Protein Homology	CDS	11521	11949	.	+	0	ID=cds-WP_058331706.1;Parent=gene-C9E94_RS23050;Dbxref=GenBank:WP_058331706.1;Name=WP_058331706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004856789.1;locus_tag=C9E94_RS23050;product=antirestriction protein;protein_id=WP_058331706.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	12074	12412	.	+	.	ID=gene-C9E94_RS23055;Name=C9E94_RS23055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23055;old_locus_tag=C9E94_23655
NZ_PYJR01000141.1	Protein Homology	CDS	12074	12412	.	+	0	ID=cds-WP_108638344.1;Parent=gene-C9E94_RS23055;Dbxref=GenBank:WP_108638344.1;Name=WP_108638344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000988076.1;locus_tag=C9E94_RS23055;product=hypothetical protein;protein_id=WP_108638344.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	12487	13422	.	+	.	ID=gene-C9E94_RS23060;Name=C9E94_RS23060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23060;old_locus_tag=C9E94_23660
NZ_PYJR01000141.1	Protein Homology	CDS	12487	13422	.	+	0	ID=cds-WP_135401264.1;Parent=gene-C9E94_RS23060;Dbxref=GenBank:WP_135401264.1;Name=WP_135401264.1;Ontology_term=GO:0003697,GO:0008237,GO:0008270;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000163274.1;locus_tag=C9E94_RS23060;product=ArdC family protein;protein_id=WP_135401264.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	13656	14498	.	+	.	ID=gene-C9E94_RS23065;Name=C9E94_RS23065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23065;old_locus_tag=C9E94_23665
NZ_PYJR01000141.1	Protein Homology	CDS	13656	14498	.	+	0	ID=cds-WP_115178853.1;Parent=gene-C9E94_RS23065;Dbxref=GenBank:WP_115178853.1;Name=WP_115178853.1;Ontology_term=GO:0003677,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525580.1;locus_tag=C9E94_RS23065;product=3'-5' exonuclease;protein_id=WP_115178853.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	14630	15043	.	+	.	ID=gene-C9E94_RS23070;Name=C9E94_RS23070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23070
NZ_PYJR01000141.1	GeneMarkS-2+	CDS	14630	15043	.	+	0	ID=cds-WP_135401265.1;Parent=gene-C9E94_RS23070;Dbxref=GenBank:WP_135401265.1;Name=WP_135401265.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS23070;product=hypothetical protein;protein_id=WP_135401265.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	15048	16433	.	+	.	ID=gene-C9E94_RS23075;Name=C9E94_RS23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23075;old_locus_tag=C9E94_23670
NZ_PYJR01000141.1	Protein Homology	CDS	15048	16433	.	+	0	ID=cds-WP_135401266.1;Parent=gene-C9E94_RS23075;Dbxref=GenBank:WP_135401266.1;Name=WP_135401266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014640265.1;locus_tag=C9E94_RS23075;product=TraI domain-containing protein;protein_id=WP_135401266.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	16445	17407	.	+	.	ID=gene-C9E94_RS23080;Name=C9E94_RS23080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23080;old_locus_tag=C9E94_23675
NZ_PYJR01000141.1	Protein Homology	CDS	16445	17407	.	+	0	ID=cds-WP_135401267.1;Parent=gene-C9E94_RS23080;Dbxref=GenBank:WP_135401267.1;Name=WP_135401267.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005173655.1;locus_tag=C9E94_RS23080;product=tyrosine-type recombinase/integrase;protein_id=WP_135401267.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	17619	17694	.	-	.	ID=gene-C9E94_RS23085;Name=C9E94_RS23085;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS23085;old_locus_tag=C9E94_23680
NZ_PYJR01000141.1	tRNAscan-SE	tRNA	17619	17694	.	-	.	ID=rna-C9E94_RS23085;Parent=gene-C9E94_RS23085;anticodon=(pos:complement(17659..17661));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS23085;product=tRNA-Phe
NZ_PYJR01000141.1	tRNAscan-SE	exon	17619	17694	.	-	.	ID=exon-C9E94_RS23085-1;Parent=rna-C9E94_RS23085;anticodon=(pos:complement(17659..17661));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS23085;product=tRNA-Phe
NZ_PYJR01000141.1	RefSeq	gene	17811	18386	.	-	.	ID=gene-C9E94_RS23090;Name=C9E94_RS23090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23090;old_locus_tag=C9E94_23685
NZ_PYJR01000141.1	Protein Homology	CDS	17811	18386	.	-	0	ID=cds-WP_001188504.1;Parent=gene-C9E94_RS23090;Dbxref=GenBank:WP_001188504.1;Name=WP_001188504.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463186.1;locus_tag=C9E94_RS23090;product=transcriptional regulator;protein_id=WP_001188504.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	18423	20126	.	-	.	ID=gene-C9E94_RS23095;Name=C9E94_RS23095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23095;old_locus_tag=C9E94_23690
NZ_PYJR01000141.1	Protein Homology	CDS	18423	20126	.	-	0	ID=cds-WP_001651309.1;Parent=gene-C9E94_RS23095;Dbxref=GenBank:WP_001651309.1;Name=WP_001651309.1;Ontology_term=GO:0017004,GO:0009055,GO:0030554,GO:0047134;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,adenyl nucleotide binding|0030554||IEA,protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463187.1;locus_tag=C9E94_RS23095;product=protein-disulfide reductase DsbD;protein_id=WP_001651309.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	20102	20449	.	-	.	ID=gene-C9E94_RS23100;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=C9E94_RS23100;old_locus_tag=C9E94_23695
NZ_PYJR01000141.1	Protein Homology	CDS	20102	20449	.	-	0	ID=cds-WP_000887832.1;Parent=gene-C9E94_RS23100;Dbxref=GenBank:WP_000887832.1;Name=WP_000887832.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463188.1;locus_tag=C9E94_RS23100;product=divalent cation tolerance protein CutA;protein_id=WP_000887832.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	20570	21871	.	-	.	ID=gene-C9E94_RS23105;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=C9E94_RS23105;old_locus_tag=C9E94_23700
NZ_PYJR01000141.1	Protein Homology	CDS	20570	21871	.	-	0	ID=cds-WP_000637595.1;Parent=gene-C9E94_RS23105;Dbxref=GenBank:WP_000637595.1;Name=WP_000637595.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463189.1;locus_tag=C9E94_RS23105;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WP_000637595.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	21986	23422	.	-	.	ID=gene-C9E94_RS23110;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=C9E94_RS23110;old_locus_tag=C9E94_23705
NZ_PYJR01000141.1	Protein Homology	CDS	21986	23422	.	-	0	ID=cds-WP_000069440.1;Parent=gene-C9E94_RS23110;Dbxref=GenBank:WP_000069440.1;Name=WP_000069440.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463190.1;locus_tag=C9E94_RS23110;product=aspartate ammonia-lyase;protein_id=WP_000069440.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	23763	24239	.	+	.	ID=gene-C9E94_RS23115;Name=C9E94_RS23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23115;old_locus_tag=C9E94_23710
NZ_PYJR01000141.1	Protein Homology	CDS	23763	24239	.	+	0	ID=cds-WP_001267291.1;Parent=gene-C9E94_RS23115;Dbxref=GenBank:WP_001267291.1;Name=WP_001267291.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313148.1;locus_tag=C9E94_RS23115;product=FxsA family protein;protein_id=WP_001267291.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	24298	25539	.	-	.	ID=gene-C9E94_RS23120;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=C9E94_RS23120;old_locus_tag=C9E94_23715
NZ_PYJR01000141.1	Protein Homology	CDS	24298	25539	.	-	0	ID=cds-WP_001670701.1;Parent=gene-C9E94_RS23120;Dbxref=GenBank:WP_001670701.1;Name=WP_001670701.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463192.1;locus_tag=C9E94_RS23120;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_001670701.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	25815	26108	.	+	.	ID=gene-C9E94_RS23125;Name=C9E94_RS23125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23125;old_locus_tag=C9E94_23720
NZ_PYJR01000141.1	Protein Homology	CDS	25815	26108	.	+	0	ID=cds-WP_000027827.1;Parent=gene-C9E94_RS23125;Dbxref=GenBank:WP_000027827.1;Name=WP_000027827.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=C9E94_RS23125;product=co-chaperone GroES;protein_id=WP_000027827.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	26152	27798	.	+	.	ID=gene-C9E94_RS23130;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=C9E94_RS23130;old_locus_tag=C9E94_23725
NZ_PYJR01000141.1	Protein Homology	CDS	26152	27798	.	+	0	ID=cds-WP_000729126.1;Parent=gene-C9E94_RS23130;Dbxref=GenBank:WP_000729126.1;Name=WP_000729126.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=C9E94_RS23130;product=chaperonin GroEL;protein_id=WP_000729126.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	28033	28386	.	+	.	ID=gene-C9E94_RS23135;Name=C9E94_RS23135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23135;old_locus_tag=C9E94_23730
NZ_PYJR01000141.1	Protein Homology	CDS	28033	28386	.	+	0	ID=cds-WP_000558210.1;Parent=gene-C9E94_RS23135;Dbxref=GenBank:WP_000558210.1;Name=WP_000558210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=C9E94_RS23135;product=DUF4156 domain-containing protein;protein_id=WP_000558210.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	28434	29291	.	-	.	ID=gene-C9E94_RS23140;Name=C9E94_RS23140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23140;old_locus_tag=C9E94_23735
NZ_PYJR01000141.1	Protein Homology	CDS	28434	29291	.	-	0	ID=cds-WP_001229227.1;Parent=gene-C9E94_RS23140;Dbxref=GenBank:WP_001229227.1;Name=WP_001229227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463196.1;locus_tag=C9E94_RS23140;product=YjeJ family protein;protein_id=WP_001229227.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	29573	30601	.	-	.	ID=gene-C9E94_RS23145;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=C9E94_RS23145;old_locus_tag=C9E94_23740
NZ_PYJR01000141.1	Protein Homology	CDS	29573	30601	.	-	0	ID=cds-WP_000940482.1;Parent=gene-C9E94_RS23145;Dbxref=GenBank:WP_000940482.1;Name=WP_000940482.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463197.1;locus_tag=C9E94_RS23145;product=EF-P beta-lysylation protein EpmB;protein_id=WP_000940482.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	30642	31208	.	+	.	ID=gene-C9E94_RS23150;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=C9E94_RS23150;old_locus_tag=C9E94_23745
NZ_PYJR01000141.1	Protein Homology	CDS	30642	31208	.	+	0	ID=cds-WP_000257282.1;Parent=gene-C9E94_RS23150;Dbxref=GenBank:WP_000257282.1;Name=WP_000257282.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=C9E94_RS23150;product=elongation factor P;protein_id=WP_000257282.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	31269	31403	.	+	.	ID=gene-C9E94_RS23155;Name=C9E94_RS23155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23155;old_locus_tag=C9E94_23750
NZ_PYJR01000141.1	Protein Homology	CDS	31269	31403	.	+	0	ID=cds-WP_000977686.1;Parent=gene-C9E94_RS23155;Dbxref=GenBank:WP_000977686.1;Name=WP_000977686.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=C9E94_RS23155;product=entericidin A/B family lipoprotein;protein_id=WP_000977686.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	31511	31657	.	+	.	ID=gene-C9E94_RS23165;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=C9E94_RS23165;old_locus_tag=C9E94_23760
NZ_PYJR01000141.1	Protein Homology	CDS	31511	31657	.	+	0	ID=cds-WP_000239598.1;Parent=gene-C9E94_RS23165;Dbxref=GenBank:WP_000239598.1;Name=WP_000239598.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463200.1;locus_tag=C9E94_RS23165;product=lipoprotein toxin entericidin B;protein_id=WP_000239598.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	31688	32275	.	-	.	ID=gene-C9E94_RS23170;Name=C9E94_RS23170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23170;old_locus_tag=C9E94_23765
NZ_PYJR01000141.1	Protein Homology	CDS	31688	32275	.	-	0	ID=cds-WP_000912959.1;Parent=gene-C9E94_RS23170;Dbxref=GenBank:WP_000912959.1;Name=WP_000912959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463201.1;locus_tag=C9E94_RS23170;product=helix-turn-helix transcriptional regulator;protein_id=WP_000912959.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	32532	32849	.	+	.	ID=gene-C9E94_RS23175;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=C9E94_RS23175;old_locus_tag=C9E94_23770
NZ_PYJR01000141.1	Protein Homology	CDS	32532	32849	.	+	0	ID=cds-WP_000118469.1;Parent=gene-C9E94_RS23175;Dbxref=GenBank:WP_000118469.1;Name=WP_000118469.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463202.1;locus_tag=C9E94_RS23175;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_000118469.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	32866	33399	.	-	.	ID=gene-C9E94_RS23180;Name=C9E94_RS23180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23180;old_locus_tag=C9E94_23775
NZ_PYJR01000141.1	Protein Homology	CDS	32866	33399	.	-	0	ID=cds-WP_001238396.1;Parent=gene-C9E94_RS23180;Dbxref=GenBank:WP_001238396.1;Name=WP_001238396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463203.1;locus_tag=C9E94_RS23180;product=lipocalin family protein;protein_id=WP_001238396.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	33511	33870	.	-	.	ID=gene-C9E94_RS23185;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=C9E94_RS23185;old_locus_tag=C9E94_23780
NZ_PYJR01000141.1	Protein Homology	CDS	33511	33870	.	-	0	ID=cds-WP_135401268.1;Parent=gene-C9E94_RS23185;Dbxref=GenBank:WP_135401268.1;Name=WP_135401268.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463204.1;locus_tag=C9E94_RS23185;product=fumarate reductase subunit FrdD;protein_id=WP_135401268.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	33881	34276	.	-	.	ID=gene-C9E94_RS23190;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=C9E94_RS23190;old_locus_tag=C9E94_23785
NZ_PYJR01000141.1	Protein Homology	CDS	33881	34276	.	-	0	ID=cds-WP_000208749.1;Parent=gene-C9E94_RS23190;Dbxref=GenBank:WP_000208749.1;Name=WP_000208749.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463205.1;locus_tag=C9E94_RS23190;product=fumarate reductase subunit FrdC;protein_id=WP_000208749.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	34287	35021	.	-	.	ID=gene-C9E94_RS23195;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=C9E94_RS23195;old_locus_tag=C9E94_23790
NZ_PYJR01000141.1	Protein Homology	CDS	34287	35021	.	-	0	ID=cds-WP_000829509.1;Parent=gene-C9E94_RS23195;Dbxref=GenBank:WP_000829509.1;Name=WP_000829509.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=C9E94_RS23195;product=fumarate reductase iron-sulfur protein;protein_id=WP_000829509.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	35014	36804	.	-	.	ID=gene-C9E94_RS23200;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=C9E94_RS23200;old_locus_tag=C9E94_23795
NZ_PYJR01000141.1	Protein Homology	CDS	35014	36804	.	-	0	ID=cds-WP_001192954.1;Parent=gene-C9E94_RS23200;Dbxref=GenBank:WP_001192954.1;Name=WP_001192954.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463207.1;locus_tag=C9E94_RS23200;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_001192954.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	37127	38104	.	+	.	ID=gene-C9E94_RS23205;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=C9E94_RS23205;old_locus_tag=C9E94_23800
NZ_PYJR01000141.1	Protein Homology	CDS	37127	38104	.	+	0	ID=cds-WP_000004797.1;Parent=gene-C9E94_RS23205;Dbxref=GenBank:WP_000004797.1;Name=WP_000004797.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=C9E94_RS23205;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_000004797.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	38330	39832	.	+	.	ID=gene-C9E94_RS23210;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=C9E94_RS23210;old_locus_tag=C9E94_23805
NZ_PYJR01000141.1	Protein Homology	CDS	38330	39832	.	+	0	ID=cds-WP_080189704.1;Parent=gene-C9E94_RS23210;Dbxref=GenBank:WP_080189704.1;Name=WP_080189704.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463209.1;locus_tag=C9E94_RS23210;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_080189704.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	39897	40217	.	+	.	ID=gene-C9E94_RS23215;Name=C9E94_RS23215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23215;old_locus_tag=C9E94_23810
NZ_PYJR01000141.1	Protein Homology	CDS	39897	40217	.	+	0	ID=cds-WP_001737341.1;Parent=gene-C9E94_RS23215;Dbxref=GenBank:WP_001737341.1;Name=WP_001737341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001682126.1;locus_tag=C9E94_RS23215;product=hypothetical protein;protein_id=WP_001737341.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	40354	43680	.	-	.	ID=gene-C9E94_RS23220;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=C9E94_RS23220;old_locus_tag=C9E94_23815
NZ_PYJR01000141.1	Protein Homology	CDS	40354	43680	.	-	0	ID=cds-WP_001236749.1;Parent=gene-C9E94_RS23220;Dbxref=GenBank:WP_001236749.1;Name=WP_001236749.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463211.1;locus_tag=C9E94_RS23220;product=miniconductance mechanosensitive channel MscM;protein_id=WP_001236749.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	43699	44667	.	-	.	ID=gene-C9E94_RS23225;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=C9E94_RS23225;old_locus_tag=C9E94_23820
NZ_PYJR01000141.1	Protein Homology	CDS	43699	44667	.	-	0	ID=cds-WP_023201206.1;Parent=gene-C9E94_RS23225;Dbxref=GenBank:WP_023201206.1;Name=WP_023201206.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463212.1;locus_tag=C9E94_RS23225;product=archaetidylserine decarboxylase;protein_id=WP_023201206.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	44759	45811	.	-	.	ID=gene-C9E94_RS23230;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=C9E94_RS23230;old_locus_tag=C9E94_23825
NZ_PYJR01000141.1	Protein Homology	CDS	44759	45811	.	-	0	ID=cds-WP_000041945.1;Parent=gene-C9E94_RS23230;Dbxref=GenBank:WP_000041945.1;Name=WP_000041945.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=C9E94_RS23230;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_000041945.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	45918	46463	.	+	.	ID=gene-C9E94_RS23235;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=C9E94_RS23235;old_locus_tag=C9E94_23830
NZ_PYJR01000141.1	Protein Homology	CDS	45918	46463	.	+	0	ID=cds-WP_001271546.1;Parent=gene-C9E94_RS23235;Dbxref=GenBank:WP_001271546.1;Name=WP_001271546.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=C9E94_RS23235;product=oligoribonuclease;protein_id=WP_001271546.1;transl_table=11
NZ_PYJR01000141.1	RefSeq	gene	46525	47265	.	-	.	ID=gene-C9E94_RS23240;Name=C9E94_RS23240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23240;old_locus_tag=C9E94_23835
NZ_PYJR01000141.1	Protein Homology	CDS	46525	47265	.	-	0	ID=cds-WP_000727897.1;Parent=gene-C9E94_RS23240;Dbxref=GenBank:WP_000727897.1;Name=WP_000727897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463215.3;locus_tag=C9E94_RS23240;product=arginine ABC transporter substrate-binding protein;protein_id=WP_000727897.1;transl_table=11
##sequence-region NZ_PYJR01000063.1 1 44298
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000063.1	RefSeq	region	1	44298	.	+	.	ID=NZ_PYJR01000063.1:1..44298;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000063.1	RefSeq	direct_repeat	27	849	.	+	.	ID=id-NZ_PYJR01000063.1:27..849;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=27..55;rpt_unit_seq=cggtttatccccgctggcgcggggaacac
NZ_PYJR01000063.1	RefSeq	gene	1146	1817	.	-	.	ID=gene-C9E94_RS08505;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=C9E94_RS08505;old_locus_tag=C9E94_08695
NZ_PYJR01000063.1	Protein Homology	CDS	1146	1817	.	-	0	ID=cds-WP_001199961.1;Parent=gene-C9E94_RS08505;Dbxref=GenBank:WP_001199961.1;Name=WP_001199961.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=C9E94_RS08505;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001199961.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	1953	3251	.	-	.	ID=gene-C9E94_RS08510;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=C9E94_RS08510;old_locus_tag=C9E94_08700
NZ_PYJR01000063.1	Protein Homology	CDS	1953	3251	.	-	0	ID=cds-WP_000036734.1;Parent=gene-C9E94_RS08510;Dbxref=GenBank:WP_000036734.1;Name=WP_000036734.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=C9E94_RS08510;product=phosphopyruvate hydratase;protein_id=WP_000036734.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	3334	4971	.	-	.	ID=gene-C9E94_RS08515;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=C9E94_RS08515;old_locus_tag=C9E94_08705
NZ_PYJR01000063.1	Protein Homology	CDS	3334	4971	.	-	0	ID=cds-WP_000210863.1;Parent=gene-C9E94_RS08515;Dbxref=GenBank:WP_000210863.1;Name=WP_000210863.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=C9E94_RS08515;product=glutamine hydrolyzing CTP synthase;protein_id=WP_000210863.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	5199	5999	.	-	.	ID=gene-C9E94_RS08520;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=C9E94_RS08520;old_locus_tag=C9E94_08710
NZ_PYJR01000063.1	Protein Homology	CDS	5199	5999	.	-	0	ID=cds-WP_000210454.1;Parent=gene-C9E94_RS08520;Dbxref=GenBank:WP_000210454.1;Name=WP_000210454.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461875.1;locus_tag=C9E94_RS08520;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_000210454.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	pseudogene	6605	6748	.	+	.	ID=gene-C9E94_RS23620;Name=C9E94_RS23620;end_range=6748,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23620;old_locus_tag=C9E94_08715;partial=true;pseudo=true
NZ_PYJR01000063.1	Protein Homology	CDS	6605	6748	.	+	0	ID=cds-C9E94_RS23620;Parent=gene-C9E94_RS23620;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=6748,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466162.1;locus_tag=C9E94_RS23620;partial=true;product=fimbrial protein;pseudo=true;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	6767	7063	.	-	.	ID=gene-C9E94_RS08530;Name=C9E94_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08530;old_locus_tag=C9E94_08720
NZ_PYJR01000063.1	Protein Homology	CDS	6767	7063	.	-	0	ID=cds-WP_080222753.1;Parent=gene-C9E94_RS08530;Dbxref=GenBank:WP_080222753.1;Name=WP_080222753.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532579.1;locus_tag=C9E94_RS08530;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_080222753.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	7029	7385	.	-	.	ID=gene-C9E94_RS08535;Name=C9E94_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08535;old_locus_tag=C9E94_08725
NZ_PYJR01000063.1	Protein Homology	CDS	7029	7385	.	-	0	ID=cds-WP_010989226.1;Parent=gene-C9E94_RS08535;Dbxref=GenBank:WP_010989226.1;Name=WP_010989226.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461876.3;locus_tag=C9E94_RS08535;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_010989226.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	7470	9704	.	-	.	ID=gene-C9E94_RS08540;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=C9E94_RS08540;old_locus_tag=C9E94_08730
NZ_PYJR01000063.1	Protein Homology	CDS	7470	9704	.	-	0	ID=cds-WP_000226841.1;Parent=gene-C9E94_RS08540;Dbxref=GenBank:WP_000226841.1;Name=WP_000226841.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461877.1;locus_tag=C9E94_RS08540;product=GTP diphosphokinase;protein_id=WP_000226841.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	9756	11051	.	-	.	ID=gene-C9E94_RS08545;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=C9E94_RS08545;old_locus_tag=C9E94_08735
NZ_PYJR01000063.1	Protein Homology	CDS	9756	11051	.	-	0	ID=cds-WP_000046848.1;Parent=gene-C9E94_RS08545;Dbxref=GenBank:WP_000046848.1;Name=WP_000046848.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461878.1;locus_tag=C9E94_RS08545;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_000046848.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	11109	13865	.	+	.	ID=gene-C9E94_RS08550;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=C9E94_RS08550;old_locus_tag=C9E94_08740
NZ_PYJR01000063.1	Protein Homology	CDS	11109	13865	.	+	0	ID=cds-WP_023233913.1;Parent=gene-C9E94_RS08550;Dbxref=GenBank:WP_023233913.1;Name=WP_023233913.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461879.1;locus_tag=C9E94_RS08550;product=two-component sensor histidine kinase BarA;protein_id=WP_023233913.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	13909	15051	.	-	.	ID=gene-C9E94_RS08555;Name=C9E94_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08555;old_locus_tag=C9E94_08745
NZ_PYJR01000063.1	Protein Homology	CDS	13909	15051	.	-	0	ID=cds-WP_000706479.1;Parent=gene-C9E94_RS08555;Dbxref=GenBank:WP_000706479.1;Name=WP_000706479.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461880.1;locus_tag=C9E94_RS08555;product=glycerate kinase;protein_id=WP_000706479.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	15129	16469	.	-	.	ID=gene-C9E94_RS08560;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=C9E94_RS08560;old_locus_tag=C9E94_08750
NZ_PYJR01000063.1	Protein Homology	CDS	15129	16469	.	-	0	ID=cds-WP_000107113.1;Parent=gene-C9E94_RS08560;Dbxref=GenBank:WP_000107113.1;Name=WP_000107113.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=C9E94_RS08560;product=glucarate dehydratase;protein_id=WP_000107113.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	16490	17830	.	-	.	ID=gene-C9E94_RS08565;Name=C9E94_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08565;old_locus_tag=C9E94_08755
NZ_PYJR01000063.1	Protein Homology	CDS	16490	17830	.	-	0	ID=cds-WP_000211806.1;Parent=gene-C9E94_RS08565;Dbxref=GenBank:WP_000211806.1;Name=WP_000211806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461882.1;locus_tag=C9E94_RS08565;product=enolase C-terminal domain-like protein;protein_id=WP_000211806.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	17827	19185	.	-	.	ID=gene-C9E94_RS08570;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=C9E94_RS08570;old_locus_tag=C9E94_08760
NZ_PYJR01000063.1	Protein Homology	CDS	17827	19185	.	-	0	ID=cds-WP_000097015.1;Parent=gene-C9E94_RS08570;Dbxref=GenBank:WP_000097015.1;Name=WP_000097015.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461883.1;locus_tag=C9E94_RS08570;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_000097015.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	19265	19495	.	+	.	ID=gene-C9E94_RS08575;Name=C9E94_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08575;old_locus_tag=C9E94_08765
NZ_PYJR01000063.1	GeneMarkS-2+	CDS	19265	19495	.	+	0	ID=cds-WP_109155243.1;Parent=gene-C9E94_RS08575;Dbxref=GenBank:WP_109155243.1;Name=WP_109155243.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS08575;product=hypothetical protein;protein_id=WP_109155243.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	19667	20116	.	-	.	ID=gene-C9E94_RS08580;Name=C9E94_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08580;old_locus_tag=C9E94_08770
NZ_PYJR01000063.1	Protein Homology	CDS	19667	20116	.	-	0	ID=cds-WP_001660880.1;Parent=gene-C9E94_RS08580;Dbxref=GenBank:WP_001660880.1;Name=WP_001660880.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461884.1;locus_tag=C9E94_RS08580;product=flavodoxin;protein_id=WP_001660880.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	20135	20917	.	-	.	ID=gene-C9E94_RS08585;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=C9E94_RS08585;old_locus_tag=C9E94_08775
NZ_PYJR01000063.1	Protein Homology	CDS	20135	20917	.	-	0	ID=cds-WP_000890030.1;Parent=gene-C9E94_RS08585;Dbxref=GenBank:WP_000890030.1;Name=WP_000890030.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001715016.1;locus_tag=C9E94_RS08585;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_000890030.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	20917	21246	.	-	.	ID=gene-C9E94_RS08590;Name=C9E94_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08590;old_locus_tag=C9E94_08780
NZ_PYJR01000063.1	Protein Homology	CDS	20917	21246	.	-	0	ID=cds-WP_135400940.1;Parent=gene-C9E94_RS08590;Dbxref=GenBank:WP_135400940.1;Name=WP_135400940.1;Ontology_term=GO:0044010;gbkey=CDS;go_process=single-species biofilm formation|0044010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461886.1;locus_tag=C9E94_RS08590;product=YqcC family protein;protein_id=WP_135400940.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	21858	22403	.	-	.	ID=gene-C9E94_RS08600;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=C9E94_RS08600;old_locus_tag=C9E94_08790
NZ_PYJR01000063.1	Protein Homology	CDS	21858	22403	.	-	0	ID=cds-WP_135400941.1;Parent=gene-C9E94_RS08600;Dbxref=GenBank:WP_135400941.1;Name=WP_135400941.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461887.1;locus_tag=C9E94_RS08600;product=SecY-interacting protein;protein_id=WP_135400941.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	22472	23320	.	+	.	ID=gene-C9E94_RS08605;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=C9E94_RS08605;old_locus_tag=C9E94_08795
NZ_PYJR01000063.1	Protein Homology	CDS	22472	23320	.	+	0	ID=cds-WP_135400942.1;Parent=gene-C9E94_RS08605;Dbxref=GenBank:WP_135400942.1;Name=WP_135400942.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461888.1;locus_tag=C9E94_RS08605;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_135400942.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	23433	24797	.	+	.	ID=gene-C9E94_RS08610;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=C9E94_RS08610;old_locus_tag=C9E94_08800
NZ_PYJR01000063.1	Protein Homology	CDS	23433	24797	.	+	0	ID=cds-WP_000627973.1;Parent=gene-C9E94_RS08610;Dbxref=GenBank:WP_000627973.1;Name=WP_000627973.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461889.1;locus_tag=C9E94_RS08610;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_000627973.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	25362	26651	.	+	.	ID=gene-C9E94_RS08615;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=C9E94_RS08615;old_locus_tag=C9E94_08805
NZ_PYJR01000063.1	Protein Homology	CDS	25362	26651	.	+	0	ID=cds-WP_000450462.1;Parent=gene-C9E94_RS08615;Dbxref=GenBank:WP_000450462.1;Name=WP_000450462.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461890.1;locus_tag=C9E94_RS08615;product=HAAAP family serine/threonine permease SdaC;protein_id=WP_000450462.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	26710	28077	.	+	.	ID=gene-C9E94_RS08620;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=C9E94_RS08620;old_locus_tag=C9E94_08810
NZ_PYJR01000063.1	Protein Homology	CDS	26710	28077	.	+	0	ID=cds-WP_000626384.1;Parent=gene-C9E94_RS08620;Dbxref=GenBank:WP_000626384.1;Name=WP_000626384.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461891.2;locus_tag=C9E94_RS08620;product=L-serine ammonia-lyase II;protein_id=WP_000626384.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	28248	29003	.	+	.	ID=gene-C9E94_RS08630;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=C9E94_RS08630;old_locus_tag=C9E94_08820
NZ_PYJR01000063.1	Protein Homology	CDS	28248	29003	.	+	0	ID=cds-WP_001519360.1;Parent=gene-C9E94_RS08630;Dbxref=GenBank:WP_001519360.1;Name=WP_001519360.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=C9E94_RS08630;product=flap endonuclease Xni;protein_id=WP_001519360.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	29095	30243	.	-	.	ID=gene-C9E94_RS08635;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=C9E94_RS08635;old_locus_tag=C9E94_08825
NZ_PYJR01000063.1	Protein Homology	CDS	29095	30243	.	-	0	ID=cds-WP_000013565.1;Parent=gene-C9E94_RS08635;Dbxref=GenBank:WP_000013565.1;Name=WP_000013565.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461893.1;locus_tag=C9E94_RS08635;product=lactaldehyde reductase;protein_id=WP_000013565.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	30260	30907	.	-	.	ID=gene-C9E94_RS08640;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=C9E94_RS08640;old_locus_tag=C9E94_08830
NZ_PYJR01000063.1	Protein Homology	CDS	30260	30907	.	-	0	ID=cds-WP_000440819.1;Parent=gene-C9E94_RS08640;Dbxref=GenBank:WP_000440819.1;Name=WP_000440819.1;Ontology_term=GO:0006004,GO:0008270,GO:0008738;gbkey=CDS;gene=fucA;go_function=zinc ion binding|0008270||IEA,L-fuculose-phosphate aldolase activity|0008738||IEA;go_process=fucose metabolic process|0006004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461894.1;locus_tag=C9E94_RS08640;product=L-fuculose-phosphate aldolase;protein_id=WP_000440819.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	31465	32781	.	+	.	ID=gene-C9E94_RS08645;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=C9E94_RS08645;old_locus_tag=C9E94_08835
NZ_PYJR01000063.1	Protein Homology	CDS	31465	32781	.	+	0	ID=cds-WP_000528622.1;Parent=gene-C9E94_RS08645;Dbxref=GenBank:WP_000528622.1;Name=WP_000528622.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=C9E94_RS08645;product=L-fucose:H+ symporter permease;protein_id=WP_000528622.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	32813	34588	.	+	.	ID=gene-C9E94_RS08650;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=C9E94_RS08650;old_locus_tag=C9E94_08840
NZ_PYJR01000063.1	Protein Homology	CDS	32813	34588	.	+	0	ID=cds-WP_023204017.1;Parent=gene-C9E94_RS08650;Dbxref=GenBank:WP_023204017.1;Name=WP_023204017.1;Ontology_term=GO:0019317,GO:0008736,GO:0030145,GO:0005737;gbkey=CDS;gene=fucI;go_component=cytoplasm|0005737||IEA;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461895.1;locus_tag=C9E94_RS08650;product=L-fucose isomerase;protein_id=WP_023204017.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	34689	36107	.	+	.	ID=gene-C9E94_RS08655;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=C9E94_RS08655;old_locus_tag=C9E94_08845
NZ_PYJR01000063.1	Protein Homology	CDS	34689	36107	.	+	0	ID=cds-WP_000806780.1;Parent=gene-C9E94_RS08655;Dbxref=GenBank:WP_000806780.1;Name=WP_000806780.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461896.1;locus_tag=C9E94_RS08655;product=L-fuculokinase;protein_id=WP_000806780.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	36109	36531	.	+	.	ID=gene-C9E94_RS08660;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=C9E94_RS08660;old_locus_tag=C9E94_08850
NZ_PYJR01000063.1	Protein Homology	CDS	36109	36531	.	+	0	ID=cds-WP_000920848.1;Parent=gene-C9E94_RS08660;Dbxref=GenBank:WP_000920848.1;Name=WP_000920848.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461897.1;locus_tag=C9E94_RS08660;product=L-fucose mutarotase;protein_id=WP_000920848.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	36589	37299	.	+	.	ID=gene-C9E94_RS08665;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=C9E94_RS08665;old_locus_tag=C9E94_08855
NZ_PYJR01000063.1	Protein Homology	CDS	36589	37299	.	+	0	ID=cds-WP_000642330.1;Parent=gene-C9E94_RS08665;Dbxref=GenBank:WP_000642330.1;Name=WP_000642330.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461898.1;locus_tag=C9E94_RS08665;product=L-fucose operon activator;protein_id=WP_000642330.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	37346	38446	.	-	.	ID=gene-C9E94_RS08670;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=C9E94_RS08670;old_locus_tag=C9E94_08860
NZ_PYJR01000063.1	Protein Homology	CDS	37346	38446	.	-	0	ID=cds-WP_001045497.1;Parent=gene-C9E94_RS08670;Dbxref=GenBank:WP_001045497.1;Name=WP_001045497.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=C9E94_RS08670;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_001045497.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	38439	38834	.	-	.	ID=gene-C9E94_RS08675;Name=C9E94_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08675;old_locus_tag=C9E94_08865
NZ_PYJR01000063.1	Protein Homology	CDS	38439	38834	.	-	0	ID=cds-WP_000203913.1;Parent=gene-C9E94_RS08675;Dbxref=GenBank:WP_000203913.1;Name=WP_000203913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461900.1;locus_tag=C9E94_RS08675;product=DUF423 domain-containing protein;protein_id=WP_000203913.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	38853	39770	.	-	.	ID=gene-C9E94_RS08680;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=C9E94_RS08680;old_locus_tag=C9E94_08870
NZ_PYJR01000063.1	Protein Homology	CDS	38853	39770	.	-	0	ID=cds-WP_000044409.1;Parent=gene-C9E94_RS08680;Dbxref=GenBank:WP_000044409.1;Name=WP_000044409.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=C9E94_RS08680;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_000044409.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	40117	40344	.	-	.	ID=gene-C9E94_RS08685;Name=C9E94_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08685;old_locus_tag=C9E94_08875
NZ_PYJR01000063.1	Protein Homology	CDS	40117	40344	.	-	0	ID=cds-WP_000750393.1;Parent=gene-C9E94_RS08685;Dbxref=GenBank:WP_000750393.1;Name=WP_000750393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461902.1;locus_tag=C9E94_RS08685;product=YgdI/YgdR family lipoprotein;protein_id=WP_000750393.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	40537	41742	.	+	.	ID=gene-C9E94_RS08690;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=C9E94_RS08690;old_locus_tag=C9E94_08880
NZ_PYJR01000063.1	Protein Homology	CDS	40537	41742	.	+	0	ID=cds-WP_000991053.1;Parent=gene-C9E94_RS08690;Dbxref=GenBank:WP_000991053.1;Name=WP_000991053.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461903.1;locus_tag=C9E94_RS08690;product=cysteine desulfurase CsdA;protein_id=WP_000991053.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	41742	42185	.	+	.	ID=gene-C9E94_RS08695;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=C9E94_RS08695;old_locus_tag=C9E94_08885
NZ_PYJR01000063.1	Protein Homology	CDS	41742	42185	.	+	0	ID=cds-WP_000184199.1;Parent=gene-C9E94_RS08695;Dbxref=GenBank:WP_000184199.1;Name=WP_000184199.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000184199.1;locus_tag=C9E94_RS08695;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_000184199.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	42485	43372	.	+	.	ID=gene-C9E94_RS08700;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=C9E94_RS08700;old_locus_tag=C9E94_08890
NZ_PYJR01000063.1	Protein Homology	CDS	42485	43372	.	+	0	ID=cds-WP_077248417.1;Parent=gene-C9E94_RS08700;Dbxref=GenBank:WP_077248417.1;Name=WP_077248417.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461905.3;locus_tag=C9E94_RS08700;product=EamA family transporter RarD;protein_id=WP_077248417.1;transl_table=11
NZ_PYJR01000063.1	RefSeq	gene	43424	44230	.	-	.	ID=gene-C9E94_RS08705;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=C9E94_RS08705;old_locus_tag=C9E94_08895
NZ_PYJR01000063.1	Protein Homology	CDS	43424	44230	.	-	0	ID=cds-WP_080170062.1;Parent=gene-C9E94_RS08705;Dbxref=GenBank:WP_080170062.1;Name=WP_080170062.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461906.1;locus_tag=C9E94_RS08705;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_080170062.1;transl_table=11
##sequence-region NZ_PYJR01000038.1 1 43084
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000038.1	RefSeq	region	1	43084	.	+	.	ID=NZ_PYJR01000038.1:1..43084;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000038.1	RefSeq	gene	475	1623	.	+	.	ID=gene-C9E94_RS04295;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=C9E94_RS04295;old_locus_tag=C9E94_04380
NZ_PYJR01000038.1	Protein Homology	CDS	475	1623	.	+	0	ID=cds-WP_023228079.1;Parent=gene-C9E94_RS04295;Dbxref=GenBank:WP_023228079.1;Name=WP_023228079.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459071.1;locus_tag=C9E94_RS04295;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_023228079.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	1642	4869	.	+	.	ID=gene-C9E94_RS04300;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=C9E94_RS04300;old_locus_tag=C9E94_04385
NZ_PYJR01000038.1	Protein Homology	CDS	1642	4869	.	+	0	ID=cds-WP_094889031.1;Parent=gene-C9E94_RS04300;Dbxref=GenBank:WP_094889031.1;Name=WP_094889031.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=C9E94_RS04300;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_094889031.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	5143	5538	.	+	.	ID=gene-C9E94_RS04305;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=C9E94_RS04305;old_locus_tag=C9E94_04390
NZ_PYJR01000038.1	Protein Homology	CDS	5143	5538	.	+	0	ID=cds-WP_000333329.1;Parent=gene-C9E94_RS04305;Dbxref=GenBank:WP_000333329.1;Name=WP_000333329.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459073.1;locus_tag=C9E94_RS04305;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_000333329.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	5615	6211	.	-	.	ID=gene-C9E94_RS04310;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=C9E94_RS04310;old_locus_tag=C9E94_04395
NZ_PYJR01000038.1	Protein Homology	CDS	5615	6211	.	-	0	ID=cds-WP_000122863.1;Parent=gene-C9E94_RS04310;Dbxref=GenBank:WP_000122863.1;Name=WP_000122863.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459074.1;locus_tag=C9E94_RS04310;product=carnitine operon protein CaiE;protein_id=WP_000122863.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	6321	7106	.	-	.	ID=gene-C9E94_RS04315;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=C9E94_RS04315;old_locus_tag=C9E94_04400
NZ_PYJR01000038.1	Protein Homology	CDS	6321	7106	.	-	0	ID=cds-WP_000004383.1;Parent=gene-C9E94_RS04315;Dbxref=GenBank:WP_000004383.1;Name=WP_000004383.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=C9E94_RS04315;product=crotonobetainyl-CoA hydratase;protein_id=WP_000004383.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	7160	8713	.	-	.	ID=gene-C9E94_RS04320;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=C9E94_RS04320;old_locus_tag=C9E94_04405
NZ_PYJR01000038.1	Protein Homology	CDS	7160	8713	.	-	0	ID=cds-WP_000355805.1;Parent=gene-C9E94_RS04320;Dbxref=GenBank:WP_000355805.1;Name=WP_000355805.1;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459076.1;locus_tag=C9E94_RS04320;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_000355805.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	8776	9993	.	-	.	ID=gene-C9E94_RS04325;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=C9E94_RS04325;old_locus_tag=C9E94_04410
NZ_PYJR01000038.1	Protein Homology	CDS	8776	9993	.	-	0	ID=cds-WP_001016212.1;Parent=gene-C9E94_RS04325;Dbxref=GenBank:WP_001016212.1;Name=WP_001016212.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459077.1;locus_tag=C9E94_RS04325;product=L-carnitine CoA-transferase;protein_id=WP_001016212.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	10105	11247	.	-	.	ID=gene-C9E94_RS04330;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=C9E94_RS04330;old_locus_tag=C9E94_04415
NZ_PYJR01000038.1	Protein Homology	CDS	10105	11247	.	-	0	ID=cds-WP_000347134.1;Parent=gene-C9E94_RS04330;Dbxref=GenBank:WP_000347134.1;Name=WP_000347134.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=C9E94_RS04330;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_000347134.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	11282	12799	.	-	.	ID=gene-C9E94_RS04335;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=C9E94_RS04335;old_locus_tag=C9E94_04420
NZ_PYJR01000038.1	Protein Homology	CDS	11282	12799	.	-	0	ID=cds-WP_000787073.1;Parent=gene-C9E94_RS04335;Dbxref=GenBank:WP_000787073.1;Name=WP_000787073.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459079.1;locus_tag=C9E94_RS04335;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WP_000787073.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	13280	14050	.	+	.	ID=gene-C9E94_RS04340;Name=C9E94_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04340;old_locus_tag=C9E94_04430
NZ_PYJR01000038.1	Protein Homology	CDS	13280	14050	.	+	0	ID=cds-WP_135400832.1;Parent=gene-C9E94_RS04340;Dbxref=GenBank:WP_135400832.1;Name=WP_135400832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459080.1;locus_tag=C9E94_RS04340;product=electron transfer flavoprotein FixA;protein_id=WP_135400832.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	14066	15007	.	+	.	ID=gene-C9E94_RS04345;Name=C9E94_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04345;old_locus_tag=C9E94_04435
NZ_PYJR01000038.1	Protein Homology	CDS	14066	15007	.	+	0	ID=cds-WP_001032189.1;Parent=gene-C9E94_RS04345;Dbxref=GenBank:WP_001032189.1;Name=WP_001032189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459081.1;locus_tag=C9E94_RS04345;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_001032189.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	15057	16343	.	+	.	ID=gene-C9E94_RS04350;Name=C9E94_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04350;old_locus_tag=C9E94_04440
NZ_PYJR01000038.1	Protein Homology	CDS	15057	16343	.	+	0	ID=cds-WP_001287770.1;Parent=gene-C9E94_RS04350;Dbxref=GenBank:WP_001287770.1;Name=WP_001287770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459082.1;locus_tag=C9E94_RS04350;product=FAD-dependent oxidoreductase;protein_id=WP_001287770.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	16340	16627	.	+	.	ID=gene-C9E94_RS04355;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=C9E94_RS04355;old_locus_tag=C9E94_04445
NZ_PYJR01000038.1	Protein Homology	CDS	16340	16627	.	+	0	ID=cds-WP_000203736.1;Parent=gene-C9E94_RS04355;Dbxref=GenBank:WP_000203736.1;Name=WP_000203736.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459083.1;locus_tag=C9E94_RS04355;product=ferredoxin-like protein FixX;protein_id=WP_000203736.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	16774	18114	.	+	.	ID=gene-C9E94_RS04360;Name=C9E94_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04360;old_locus_tag=C9E94_04450
NZ_PYJR01000038.1	Protein Homology	CDS	16774	18114	.	+	0	ID=cds-WP_135400833.1;Parent=gene-C9E94_RS04360;Dbxref=GenBank:WP_135400833.1;Name=WP_135400833.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459084.1;locus_tag=C9E94_RS04360;product=MFS transporter;protein_id=WP_135400833.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	18203	18433	.	+	.	ID=gene-C9E94_RS04365;Name=C9E94_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04365;old_locus_tag=C9E94_04455
NZ_PYJR01000038.1	Protein Homology	CDS	18203	18433	.	+	0	ID=cds-WP_001172089.1;Parent=gene-C9E94_RS04365;Dbxref=GenBank:WP_001172089.1;Name=WP_001172089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459085.1;locus_tag=C9E94_RS04365;product=YgdI/YgdR family lipoprotein;protein_id=WP_001172089.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	18733	19149	.	+	.	ID=gene-C9E94_RS04370;Name=C9E94_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04370;old_locus_tag=C9E94_04460
NZ_PYJR01000038.1	Protein Homology	CDS	18733	19149	.	+	0	ID=cds-WP_167853643.1;Parent=gene-C9E94_RS04370;Dbxref=GenBank:WP_167853643.1;Name=WP_167853643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459086.1;locus_tag=C9E94_RS04370;product=hypothetical protein;protein_id=WP_167853643.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	19373	19663	.	-	.	ID=gene-C9E94_RS04375;Name=srfN;gbkey=Gene;gene=srfN;gene_biotype=protein_coding;locus_tag=C9E94_RS04375;old_locus_tag=C9E94_04465
NZ_PYJR01000038.1	Protein Homology	CDS	19373	19663	.	-	0	ID=cds-WP_000745961.1;Parent=gene-C9E94_RS04375;Dbxref=GenBank:WP_000745961.1;Name=WP_000745961.1;gbkey=CDS;gene=srfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459087.1;locus_tag=C9E94_RS04375;product=DUF1471 family virulence protein SrfN;protein_id=WP_000745961.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	20560	22449	.	+	.	ID=gene-C9E94_RS04380;Name=C9E94_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04380;old_locus_tag=C9E94_04475
NZ_PYJR01000038.1	Protein Homology	CDS	20560	22449	.	+	0	ID=cds-WP_000066316.1;Parent=gene-C9E94_RS04380;Dbxref=GenBank:WP_000066316.1;Name=WP_000066316.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459089.1;locus_tag=C9E94_RS04380;product=sulfatase-like hydrolase/transferase;protein_id=WP_000066316.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	pseudogene	22801	22881	.	-	.	ID=gene-C9E94_RS23850;Name=C9E94_RS23850;end_range=22881,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23850;old_locus_tag=C9E94_04485;partial=true;pseudo=true
NZ_PYJR01000038.1	Protein Homology	CDS	22801	22881	.	-	0	ID=cds-C9E94_RS23850;Parent=gene-C9E94_RS23850;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=22881,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016534841.1;locus_tag=C9E94_RS23850;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	23003	23533	.	+	.	ID=gene-C9E94_RS04385;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=C9E94_RS04385;old_locus_tag=C9E94_04490
NZ_PYJR01000038.1	Protein Homology	CDS	23003	23533	.	+	0	ID=cds-WP_000600706.1;Parent=gene-C9E94_RS04385;Dbxref=GenBank:WP_000600706.1;Name=WP_000600706.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=C9E94_RS04385;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_000600706.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	23526	25388	.	+	.	ID=gene-C9E94_RS04390;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=C9E94_RS04390;old_locus_tag=C9E94_04495
NZ_PYJR01000038.1	Protein Homology	CDS	23526	25388	.	+	0	ID=cds-WP_000377164.1;Parent=gene-C9E94_RS04390;Dbxref=GenBank:WP_000377164.1;Name=WP_000377164.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459091.1;locus_tag=C9E94_RS04390;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_000377164.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	25587	26066	.	+	.	ID=gene-C9E94_RS04395;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=C9E94_RS04395;old_locus_tag=C9E94_04505
NZ_PYJR01000038.1	Protein Homology	CDS	25587	26066	.	+	0	ID=cds-WP_000624379.1;Parent=gene-C9E94_RS04395;Dbxref=GenBank:WP_000624379.1;Name=WP_000624379.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=C9E94_RS04395;product=type 3 dihydrofolate reductase;protein_id=WP_000624379.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	26172	27020	.	-	.	ID=gene-C9E94_RS04400;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=C9E94_RS04400;old_locus_tag=C9E94_04510
NZ_PYJR01000038.1	Protein Homology	CDS	26172	27020	.	-	0	ID=cds-WP_000257211.1;Parent=gene-C9E94_RS04400;Dbxref=GenBank:WP_000257211.1;Name=WP_000257211.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459093.1;locus_tag=C9E94_RS04400;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_000257211.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	27031	27408	.	-	.	ID=gene-C9E94_RS04405;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=C9E94_RS04405;old_locus_tag=C9E94_04515
NZ_PYJR01000038.1	Protein Homology	CDS	27031	27408	.	-	0	ID=cds-WP_000610894.1;Parent=gene-C9E94_RS04405;Dbxref=GenBank:WP_000610894.1;Name=WP_000610894.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459094.1;locus_tag=C9E94_RS04405;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_000610894.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	27411	28232	.	-	.	ID=gene-C9E94_RS04410;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=C9E94_RS04410;old_locus_tag=C9E94_04520
NZ_PYJR01000038.1	Protein Homology	CDS	27411	28232	.	-	0	ID=cds-WP_001065397.1;Parent=gene-C9E94_RS04410;Dbxref=GenBank:WP_001065397.1;Name=WP_001065397.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459095.1;locus_tag=C9E94_RS04410;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001065397.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	28229	29218	.	-	.	ID=gene-C9E94_RS04415;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=C9E94_RS04415;old_locus_tag=C9E94_04525
NZ_PYJR01000038.1	Protein Homology	CDS	28229	29218	.	-	0	ID=cds-WP_000093001.1;Parent=gene-C9E94_RS04415;Dbxref=GenBank:WP_000093001.1;Name=WP_000093001.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459096.1;locus_tag=C9E94_RS04415;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_000093001.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	29218	30504	.	-	.	ID=gene-C9E94_RS04420;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=C9E94_RS04420;old_locus_tag=C9E94_04530
NZ_PYJR01000038.1	Protein Homology	CDS	29218	30504	.	-	0	ID=cds-WP_000800482.1;Parent=gene-C9E94_RS04420;Dbxref=GenBank:WP_000800482.1;Name=WP_000800482.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459097.1;locus_tag=C9E94_RS04420;product=peptidylprolyl isomerase SurA;protein_id=WP_000800482.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	30558	32918	.	-	.	ID=gene-C9E94_RS04425;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=C9E94_RS04425;old_locus_tag=C9E94_04535
NZ_PYJR01000038.1	Protein Homology	CDS	30558	32918	.	-	0	ID=cds-WP_000746116.1;Parent=gene-C9E94_RS04425;Dbxref=GenBank:WP_000746116.1;Name=WP_000746116.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459098.1;locus_tag=C9E94_RS04425;product=LPS assembly protein LptD;protein_id=WP_000746116.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	33172	33984	.	+	.	ID=gene-C9E94_RS04430;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=C9E94_RS04430;old_locus_tag=C9E94_04540
NZ_PYJR01000038.1	Protein Homology	CDS	33172	33984	.	+	0	ID=cds-WP_001200595.1;Parent=gene-C9E94_RS04430;Dbxref=GenBank:WP_001200595.1;Name=WP_001200595.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459099.1;locus_tag=C9E94_RS04430;product=co-chaperone DjlA;protein_id=WP_001200595.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	34079	34738	.	-	.	ID=gene-C9E94_RS04435;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=C9E94_RS04435;old_locus_tag=C9E94_04545
NZ_PYJR01000038.1	Protein Homology	CDS	34079	34738	.	-	0	ID=cds-WP_135400835.1;Parent=gene-C9E94_RS04435;Dbxref=GenBank:WP_135400835.1;Name=WP_135400835.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459100.1;locus_tag=C9E94_RS04435;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_135400835.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	34750	37656	.	-	.	ID=gene-C9E94_RS04440;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=C9E94_RS04440;old_locus_tag=C9E94_04550
NZ_PYJR01000038.1	Protein Homology	CDS	34750	37656	.	-	0	ID=cds-WP_135400836.1;Parent=gene-C9E94_RS04440;Dbxref=GenBank:WP_135400836.1;Name=WP_135400836.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=C9E94_RS04440;product=RNA polymerase-associated protein RapA;protein_id=WP_135400836.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	37830	40181	.	-	.	ID=gene-C9E94_RS04445;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=C9E94_RS04445;old_locus_tag=C9E94_04555
NZ_PYJR01000038.1	Protein Homology	CDS	37830	40181	.	-	0	ID=cds-WP_135400837.1;Parent=gene-C9E94_RS04445;Dbxref=GenBank:WP_135400837.1;Name=WP_135400837.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=C9E94_RS04445;product=DNA polymerase II;protein_id=WP_135400837.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	pseudogene	40225	40446	.	-	.	ID=gene-C9E94_RS04450;Name=C9E94_RS04450;end_range=40446,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS04450;old_locus_tag=C9E94_04560;partial=true;pseudo=true
NZ_PYJR01000038.1	Protein Homology	CDS	40225	40446	.	-	0	ID=cds-C9E94_RS04450;Parent=gene-C9E94_RS04450;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=40446,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=C9E94_RS04450;partial=true;product=YdcF family protein;pseudo=true;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	40521	40925	.	-	.	ID=gene-C9E94_RS04455;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=C9E94_RS04455;old_locus_tag=C9E94_04565
NZ_PYJR01000038.1	Protein Homology	CDS	40521	40925	.	-	0	ID=cds-WP_167853641.1;Parent=gene-C9E94_RS04455;Dbxref=GenBank:WP_167853641.1;Name=WP_167853641.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_021141233.1;locus_tag=C9E94_RS04455;product=IS200/IS605 family transposase;protein_id=WP_167853641.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	gene	40984	42189	.	+	.	ID=gene-C9E94_RS04460;Name=C9E94_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04460;old_locus_tag=C9E94_04570
NZ_PYJR01000038.1	Protein Homology	CDS	40984	42189	.	+	0	ID=cds-WP_167853642.1;Parent=gene-C9E94_RS04460;Dbxref=GenBank:WP_167853642.1;Name=WP_167853642.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669153.1;locus_tag=C9E94_RS04460;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=WP_167853642.1;transl_table=11
NZ_PYJR01000038.1	RefSeq	pseudogene	42265	42663	.	-	.	ID=gene-C9E94_RS04465;Name=C9E94_RS04465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS04465;old_locus_tag=C9E94_04575;partial=true;pseudo=true;start_range=.,42265
NZ_PYJR01000038.1	Protein Homology	CDS	42265	42663	.	-	0	ID=cds-C9E94_RS04465;Parent=gene-C9E94_RS04465;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=C9E94_RS04465;partial=true;product=YdcF family protein;pseudo=true;start_range=.,42265;transl_table=11
##sequence-region NZ_PYJR01000080.1 1 42829
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000080.1	RefSeq	region	1	42829	.	+	.	ID=NZ_PYJR01000080.1:1..42829;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000080.1	RefSeq	gene	454	816	.	-	.	ID=gene-C9E94_RS10095;Name=C9E94_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10095;old_locus_tag=C9E94_10320
NZ_PYJR01000080.1	Protein Homology	CDS	454	816	.	-	0	ID=cds-WP_000665687.1;Parent=gene-C9E94_RS10095;Dbxref=GenBank:WP_000665687.1;Name=WP_000665687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462589.1;locus_tag=C9E94_RS10095;product=YibL family ribosome-associated protein;protein_id=WP_000665687.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	1106	1315	.	+	.	ID=gene-C9E94_RS10100;Name=C9E94_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10100;old_locus_tag=C9E94_10325
NZ_PYJR01000080.1	Protein Homology	CDS	1106	1315	.	+	0	ID=cds-WP_001062558.1;Parent=gene-C9E94_RS10100;Dbxref=GenBank:WP_001062558.1;Name=WP_001062558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462588.1;locus_tag=C9E94_RS10100;product=hypothetical protein;protein_id=WP_001062558.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	1325	1915	.	-	.	ID=gene-C9E94_RS10105;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=C9E94_RS10105;old_locus_tag=C9E94_10330
NZ_PYJR01000080.1	Protein Homology	CDS	1325	1915	.	-	0	ID=cds-WP_000193201.1;Parent=gene-C9E94_RS10105;Dbxref=GenBank:WP_000193201.1;Name=WP_000193201.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462587.1;locus_tag=C9E94_RS10105;product=mannitol operon repressor MtlR;protein_id=WP_000193201.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	1912	3060	.	-	.	ID=gene-C9E94_RS10110;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=C9E94_RS10110;old_locus_tag=C9E94_10335
NZ_PYJR01000080.1	Protein Homology	CDS	1912	3060	.	-	0	ID=cds-WP_000645391.1;Parent=gene-C9E94_RS10110;Dbxref=GenBank:WP_000645391.1;Name=WP_000645391.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462586.1;locus_tag=C9E94_RS10110;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_000645391.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	3293	5209	.	-	.	ID=gene-C9E94_RS10120;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=C9E94_RS10120;old_locus_tag=C9E94_10340
NZ_PYJR01000080.1	Protein Homology	CDS	3293	5209	.	-	0	ID=cds-WP_094889135.1;Parent=gene-C9E94_RS10120;Dbxref=GenBank:WP_094889135.1;Name=WP_094889135.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462585.1;locus_tag=C9E94_RS10120;product=PTS mannitol transporter subunit IICBA;protein_id=WP_094889135.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	5743	6105	.	+	.	ID=gene-C9E94_RS10130;Name=C9E94_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10130;old_locus_tag=C9E94_10350
NZ_PYJR01000080.1	Protein Homology	CDS	5743	6105	.	+	0	ID=cds-WP_000479642.1;Parent=gene-C9E94_RS10130;Dbxref=GenBank:WP_000479642.1;Name=WP_000479642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418055.1;locus_tag=C9E94_RS10130;product=DUF3302 domain-containing protein;protein_id=WP_000479642.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	6108	7244	.	+	.	ID=gene-C9E94_RS10135;Name=C9E94_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10135;old_locus_tag=C9E94_10355
NZ_PYJR01000080.1	Protein Homology	CDS	6108	7244	.	+	0	ID=cds-WP_000364909.1;Parent=gene-C9E94_RS10135;Dbxref=GenBank:WP_000364909.1;Name=WP_000364909.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312500.1;locus_tag=C9E94_RS10135;product=HlyD family secretion protein;protein_id=WP_000364909.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	7342	7950	.	+	.	ID=gene-C9E94_RS10140;Name=C9E94_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10140;old_locus_tag=C9E94_10360
NZ_PYJR01000080.1	Protein Homology	CDS	7342	7950	.	+	0	ID=cds-WP_000766677.1;Parent=gene-C9E94_RS10140;Dbxref=GenBank:WP_000766677.1;Name=WP_000766677.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462584.1;locus_tag=C9E94_RS10140;product=glutathione S-transferase;protein_id=WP_000766677.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	8049	9440	.	+	.	ID=gene-C9E94_RS10145;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=C9E94_RS10145;old_locus_tag=C9E94_10365
NZ_PYJR01000080.1	Protein Homology	CDS	8049	9440	.	+	0	ID=cds-WP_135400982.1;Parent=gene-C9E94_RS10145;Dbxref=GenBank:WP_135400982.1;Name=WP_135400982.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462583.1;locus_tag=C9E94_RS10145;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_135400982.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	9437	11287	.	+	.	ID=gene-C9E94_RS10150;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=C9E94_RS10150;old_locus_tag=C9E94_10370
NZ_PYJR01000080.1	Protein Homology	CDS	9437	11287	.	+	0	ID=cds-WP_000582390.1;Parent=gene-C9E94_RS10150;Dbxref=GenBank:WP_000582390.1;Name=WP_000582390.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462582.1;locus_tag=C9E94_RS10150;product=selenocysteine-specific translation elongation factor;protein_id=WP_000582390.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	11535	12416	.	-	.	ID=gene-C9E94_RS10155;Name=C9E94_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10155;old_locus_tag=C9E94_10375
NZ_PYJR01000080.1	Protein Homology	CDS	11535	12416	.	-	0	ID=cds-WP_135400983.1;Parent=gene-C9E94_RS10155;Dbxref=GenBank:WP_135400983.1;Name=WP_135400983.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954677.1;locus_tag=C9E94_RS10155;product=ROK family protein;protein_id=WP_135400983.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	12585	14123	.	+	.	ID=gene-C9E94_RS10160;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=C9E94_RS10160;old_locus_tag=C9E94_10380
NZ_PYJR01000080.1	Protein Homology	CDS	12585	14123	.	+	0	ID=cds-WP_000183988.1;Parent=gene-C9E94_RS10160;Dbxref=GenBank:WP_000183988.1;Name=WP_000183988.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462580.1;locus_tag=C9E94_RS10160;product=aldehyde dehydrogenase AldB;protein_id=WP_000183988.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	14297	16252	.	-	.	ID=gene-C9E94_RS10165;Name=C9E94_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10165;old_locus_tag=C9E94_10385
NZ_PYJR01000080.1	Protein Homology	CDS	14297	16252	.	-	0	ID=cds-WP_135400984.1;Parent=gene-C9E94_RS10165;Dbxref=GenBank:WP_135400984.1;Name=WP_135400984.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462579.1;locus_tag=C9E94_RS10165;product=glycoside hydrolase family 127 protein;protein_id=WP_135400984.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	16516	17331	.	+	.	ID=gene-C9E94_RS10170;Name=C9E94_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10170;old_locus_tag=C9E94_10390
NZ_PYJR01000080.1	Protein Homology	CDS	16516	17331	.	+	0	ID=cds-WP_000891816.1;Parent=gene-C9E94_RS10170;Dbxref=GenBank:WP_000891816.1;Name=WP_000891816.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462578.1;locus_tag=C9E94_RS10170;product=AraC family transcriptional regulator;protein_id=WP_000891816.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	17492	18187	.	-	.	ID=gene-C9E94_RS10175;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=C9E94_RS10175;old_locus_tag=C9E94_10395
NZ_PYJR01000080.1	Protein Homology	CDS	17492	18187	.	-	0	ID=cds-WP_023261416.1;Parent=gene-C9E94_RS10175;Dbxref=GenBank:WP_023261416.1;Name=WP_023261416.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462577.1;locus_tag=C9E94_RS10175;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_023261416.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	18181	19041	.	-	.	ID=gene-C9E94_RS10180;Name=C9E94_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10180;old_locus_tag=C9E94_10400
NZ_PYJR01000080.1	Protein Homology	CDS	18181	19041	.	-	0	ID=cds-WP_023261417.1;Parent=gene-C9E94_RS10180;Dbxref=GenBank:WP_023261417.1;Name=WP_023261417.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462576.1;locus_tag=C9E94_RS10180;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_023261417.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	19034	19696	.	-	.	ID=gene-C9E94_RS10185;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=C9E94_RS10185;old_locus_tag=C9E94_10405
NZ_PYJR01000080.1	Protein Homology	CDS	19034	19696	.	-	0	ID=cds-WP_023261418.1;Parent=gene-C9E94_RS10185;Dbxref=GenBank:WP_023261418.1;Name=WP_023261418.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462575.1;locus_tag=C9E94_RS10185;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_023261418.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	19693	21189	.	-	.	ID=gene-C9E94_RS10190;Name=C9E94_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10190;old_locus_tag=C9E94_10410
NZ_PYJR01000080.1	Protein Homology	CDS	19693	21189	.	-	0	ID=cds-WP_135400985.1;Parent=gene-C9E94_RS10190;Dbxref=GenBank:WP_135400985.1;Name=WP_135400985.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462574.1;locus_tag=C9E94_RS10190;product=FGGY-family carbohydrate kinase;protein_id=WP_135400985.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	21193	22179	.	-	.	ID=gene-C9E94_RS10195;Name=yiaO;gbkey=Gene;gene=yiaO;gene_biotype=protein_coding;locus_tag=C9E94_RS10195;old_locus_tag=C9E94_10415
NZ_PYJR01000080.1	Protein Homology	CDS	21193	22179	.	-	0	ID=cds-WP_000766337.1;Parent=gene-C9E94_RS10195;Dbxref=GenBank:WP_000766337.1;Name=WP_000766337.1;gbkey=CDS;gene=yiaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462573.1;locus_tag=C9E94_RS10195;product=2%2C3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO;protein_id=WP_000766337.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	22191	23468	.	-	.	ID=gene-C9E94_RS10200;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=C9E94_RS10200;old_locus_tag=C9E94_10420
NZ_PYJR01000080.1	Protein Homology	CDS	22191	23468	.	-	0	ID=cds-WP_000301822.1;Parent=gene-C9E94_RS10200;Dbxref=GenBank:WP_000301822.1;Name=WP_000301822.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaN;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462572.1;locus_tag=C9E94_RS10200;product=2%2C3-diketo-L-gulonate TRAP transporter large permease YiaN;protein_id=WP_000301822.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	23471	23944	.	-	.	ID=gene-C9E94_RS10205;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=C9E94_RS10205;old_locus_tag=C9E94_10425
NZ_PYJR01000080.1	Protein Homology	CDS	23471	23944	.	-	0	ID=cds-WP_000832313.1;Parent=gene-C9E94_RS10205;Dbxref=GenBank:WP_000832313.1;Name=WP_000832313.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaM;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462571.1;locus_tag=C9E94_RS10205;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WP_000832313.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	24083	25015	.	-	.	ID=gene-C9E94_RS10210;Name=C9E94_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10210;old_locus_tag=C9E94_10430
NZ_PYJR01000080.1	Protein Homology	CDS	24083	25015	.	-	0	ID=cds-WP_135400986.1;Parent=gene-C9E94_RS10210;Dbxref=GenBank:WP_135400986.1;Name=WP_135400986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462570.1;locus_tag=C9E94_RS10210;product=DUF4862 family protein;protein_id=WP_135400986.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	25039	25503	.	-	.	ID=gene-C9E94_RS10215;Name=C9E94_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10215;old_locus_tag=C9E94_10435
NZ_PYJR01000080.1	Protein Homology	CDS	25039	25503	.	-	0	ID=cds-WP_000576102.1;Parent=gene-C9E94_RS10215;Dbxref=GenBank:WP_000576102.1;Name=WP_000576102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462569.1;locus_tag=C9E94_RS10215;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000576102.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	25515	26513	.	-	.	ID=gene-C9E94_RS10220;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=C9E94_RS10220;old_locus_tag=C9E94_10440
NZ_PYJR01000080.1	Protein Homology	CDS	25515	26513	.	-	0	ID=cds-WP_000869008.1;Parent=gene-C9E94_RS10220;Dbxref=GenBank:WP_000869008.1;Name=WP_000869008.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462568.1;locus_tag=C9E94_RS10220;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_000869008.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	26743	27543	.	+	.	ID=gene-C9E94_RS10225;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=C9E94_RS10225;old_locus_tag=C9E94_10445
NZ_PYJR01000080.1	Protein Homology	CDS	26743	27543	.	+	0	ID=cds-WP_000081338.1;Parent=gene-C9E94_RS10225;Dbxref=GenBank:WP_000081338.1;Name=WP_000081338.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462567.1;locus_tag=C9E94_RS10225;product=IclR family transcriptional regulator YiaJ;protein_id=WP_000081338.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	27660	28133	.	+	.	ID=gene-C9E94_RS10230;Name=C9E94_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10230;old_locus_tag=C9E94_10450
NZ_PYJR01000080.1	Protein Homology	CDS	27660	28133	.	+	0	ID=cds-WP_135400987.1;Parent=gene-C9E94_RS10230;Dbxref=GenBank:WP_135400987.1;Name=WP_135400987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462566.1;locus_tag=C9E94_RS10230;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_135400987.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	28170	29420	.	-	.	ID=gene-C9E94_RS10235;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=C9E94_RS10235;old_locus_tag=C9E94_10455
NZ_PYJR01000080.1	Protein Homology	CDS	28170	29420	.	-	0	ID=cds-WP_000144379.1;Parent=gene-C9E94_RS10235;Dbxref=GenBank:WP_000144379.1;Name=WP_000144379.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462565.1;locus_tag=C9E94_RS10235;product=valine--pyruvate transaminase;protein_id=WP_000144379.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	29594	31621	.	-	.	ID=gene-C9E94_RS10240;Name=C9E94_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10240;old_locus_tag=C9E94_10460
NZ_PYJR01000080.1	Protein Homology	CDS	29594	31621	.	-	0	ID=cds-WP_000761306.1;Parent=gene-C9E94_RS10240;Dbxref=GenBank:WP_000761306.1;Name=WP_000761306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462564.1;locus_tag=C9E94_RS10240;product=alpha-amylase;protein_id=WP_000761306.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	31937	32761	.	+	.	ID=gene-C9E94_RS10245;Name=C9E94_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10245;old_locus_tag=C9E94_10465
NZ_PYJR01000080.1	Protein Homology	CDS	31937	32761	.	+	0	ID=cds-WP_001575119.1;Parent=gene-C9E94_RS10245;Dbxref=GenBank:WP_001575119.1;Name=WP_001575119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462563.1;locus_tag=C9E94_RS10245;product=protein bax;protein_id=WP_001575119.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	32822	34000	.	-	.	ID=gene-C9E94_RS10250;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=C9E94_RS10250;old_locus_tag=C9E94_10470
NZ_PYJR01000080.1	Protein Homology	CDS	32822	34000	.	-	0	ID=cds-WP_000459824.1;Parent=gene-C9E94_RS10250;Dbxref=GenBank:WP_000459824.1;Name=WP_000459824.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462562.1;locus_tag=C9E94_RS10250;product=D-xylose utilization transcriptional activator XylR;protein_id=WP_000459824.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	34363	35685	.	+	.	ID=gene-C9E94_RS10260;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=C9E94_RS10260;old_locus_tag=C9E94_10480
NZ_PYJR01000080.1	Protein Homology	CDS	34363	35685	.	+	0	ID=cds-WP_001149561.1;Parent=gene-C9E94_RS10260;Dbxref=GenBank:WP_001149561.1;Name=WP_001149561.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462561.1;locus_tag=C9E94_RS10260;product=xylose isomerase;protein_id=WP_001149561.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	35785	37239	.	+	.	ID=gene-C9E94_RS10265;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=C9E94_RS10265;old_locus_tag=C9E94_10485
NZ_PYJR01000080.1	Protein Homology	CDS	35785	37239	.	+	0	ID=cds-WP_135400988.1;Parent=gene-C9E94_RS10265;Dbxref=GenBank:WP_135400988.1;Name=WP_135400988.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462560.1;locus_tag=C9E94_RS10265;product=xylulokinase;protein_id=WP_135400988.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	37414	37767	.	+	.	ID=gene-C9E94_RS10270;Name=C9E94_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10270;old_locus_tag=C9E94_10490
NZ_PYJR01000080.1	Protein Homology	CDS	37414	37767	.	+	0	ID=cds-WP_000340932.1;Parent=gene-C9E94_RS10270;Dbxref=GenBank:WP_000340932.1;Name=WP_000340932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462559.1;locus_tag=C9E94_RS10270;product=YiaA/YiaB family protein;protein_id=WP_000340932.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	37790	38785	.	-	.	ID=gene-C9E94_RS10275;Name=C9E94_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10275;old_locus_tag=C9E94_10495
NZ_PYJR01000080.1	Protein Homology	CDS	37790	38785	.	-	0	ID=cds-WP_001182588.1;Parent=gene-C9E94_RS10275;Dbxref=GenBank:WP_001182588.1;Name=WP_001182588.1;Ontology_term=GO:0016413,GO:0016747;gbkey=CDS;go_function=O-acetyltransferase activity|0016413||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462558.1;locus_tag=C9E94_RS10275;product=acyltransferase;protein_id=WP_001182588.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	38951	39253	.	+	.	ID=gene-C9E94_RS10285;Name=C9E94_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10285;old_locus_tag=C9E94_10505
NZ_PYJR01000080.1	Protein Homology	CDS	38951	39253	.	+	0	ID=cds-WP_000605590.1;Parent=gene-C9E94_RS10285;Dbxref=GenBank:WP_000605590.1;Name=WP_000605590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462557.1;locus_tag=C9E94_RS10285;product=YsaB family lipoprotein;protein_id=WP_000605590.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	39392	40303	.	+	.	ID=gene-C9E94_RS10290;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=C9E94_RS10290;old_locus_tag=C9E94_10510
NZ_PYJR01000080.1	Protein Homology	CDS	39392	40303	.	+	0	ID=cds-WP_001168551.1;Parent=gene-C9E94_RS10290;Dbxref=GenBank:WP_001168551.1;Name=WP_001168551.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462556.1;locus_tag=C9E94_RS10290;product=glycine--tRNA ligase subunit alpha;protein_id=WP_001168551.1;transl_table=11
NZ_PYJR01000080.1	RefSeq	gene	40313	42382	.	+	.	ID=gene-C9E94_RS10295;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=C9E94_RS10295;old_locus_tag=C9E94_10515
NZ_PYJR01000080.1	Protein Homology	CDS	40313	42382	.	+	0	ID=cds-WP_023220761.1;Parent=gene-C9E94_RS10295;Dbxref=GenBank:WP_023220761.1;Name=WP_023220761.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=C9E94_RS10295;product=glycine--tRNA ligase subunit beta;protein_id=WP_023220761.1;transl_table=11
##sequence-region NZ_PYJR01000114.1 1 42690
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000114.1	RefSeq	region	1	42690	.	+	.	ID=NZ_PYJR01000114.1:1..42690;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000114.1	RefSeq	gene	121	2292	.	-	.	ID=gene-C9E94_RS17225;Name=C9E94_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17225;old_locus_tag=C9E94_17640
NZ_PYJR01000114.1	Protein Homology	CDS	121	2292	.	-	0	ID=cds-WP_001274458.1;Parent=gene-C9E94_RS17225;Dbxref=GenBank:WP_001274458.1;Name=WP_001274458.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462083.1;locus_tag=C9E94_RS17225;product=YgiQ family radical SAM protein;protein_id=WP_001274458.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	2781	3764	.	+	.	ID=gene-C9E94_RS17230;Name=C9E94_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17230;old_locus_tag=C9E94_17645
NZ_PYJR01000114.1	Protein Homology	CDS	2781	3764	.	+	0	ID=cds-WP_000799370.1;Parent=gene-C9E94_RS17230;Dbxref=GenBank:WP_000799370.1;Name=WP_000799370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462084.1;locus_tag=C9E94_RS17230;product=TRAP transporter substrate-binding protein;protein_id=WP_000799370.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	3806	4288	.	+	.	ID=gene-C9E94_RS17235;Name=C9E94_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17235;old_locus_tag=C9E94_17650
NZ_PYJR01000114.1	Protein Homology	CDS	3806	4288	.	+	0	ID=cds-WP_001221827.1;Parent=gene-C9E94_RS17235;Dbxref=GenBank:WP_001221827.1;Name=WP_001221827.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462085.1;locus_tag=C9E94_RS17235;product=TRAP transporter small permease;protein_id=WP_001221827.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	4299	5606	.	+	.	ID=gene-C9E94_RS17240;Name=C9E94_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17240;old_locus_tag=C9E94_17655
NZ_PYJR01000114.1	Protein Homology	CDS	4299	5606	.	+	0	ID=cds-WP_000345259.1;Parent=gene-C9E94_RS17240;Dbxref=GenBank:WP_000345259.1;Name=WP_000345259.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462086.1;locus_tag=C9E94_RS17240;product=TRAP transporter large permease;protein_id=WP_000345259.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	5652	7064	.	-	.	ID=gene-C9E94_RS17245;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=C9E94_RS17245;old_locus_tag=C9E94_17660
NZ_PYJR01000114.1	Protein Homology	CDS	5652	7064	.	-	0	ID=cds-WP_000010658.1;Parent=gene-C9E94_RS17245;Dbxref=GenBank:WP_000010658.1;Name=WP_000010658.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462087.1;locus_tag=C9E94_RS17245;product=cell division protein FtsP;protein_id=WP_000010658.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	7138	7875	.	-	.	ID=gene-C9E94_RS17250;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=C9E94_RS17250;old_locus_tag=C9E94_17665
NZ_PYJR01000114.1	Protein Homology	CDS	7138	7875	.	-	0	ID=cds-WP_000965730.1;Parent=gene-C9E94_RS17250;Dbxref=GenBank:WP_000965730.1;Name=WP_000965730.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462088.1;locus_tag=C9E94_RS17250;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_000965730.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	8132	10390	.	-	.	ID=gene-C9E94_RS17255;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=C9E94_RS17255;old_locus_tag=C9E94_17670
NZ_PYJR01000114.1	Protein Homology	CDS	8132	10390	.	-	0	ID=cds-WP_001281910.1;Parent=gene-C9E94_RS17255;Dbxref=GenBank:WP_001281910.1;Name=WP_001281910.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462089.1;locus_tag=C9E94_RS17255;product=DNA topoisomerase IV subunit A;protein_id=WP_001281910.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	10501	11367	.	-	.	ID=gene-C9E94_RS17260;Name=C9E94_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17260;old_locus_tag=C9E94_17675
NZ_PYJR01000114.1	Protein Homology	CDS	10501	11367	.	-	0	ID=cds-WP_023201106.1;Parent=gene-C9E94_RS17260;Dbxref=GenBank:WP_023201106.1;Name=WP_023201106.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462090.1;locus_tag=C9E94_RS17260;product=AraC family transcriptional regulator;protein_id=WP_023201106.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	11439	11831	.	-	.	ID=gene-C9E94_RS17265;Name=C9E94_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17265;old_locus_tag=C9E94_17680
NZ_PYJR01000114.1	Protein Homology	CDS	11439	11831	.	-	0	ID=cds-WP_000731552.1;Parent=gene-C9E94_RS17265;Dbxref=GenBank:WP_000731552.1;Name=WP_000731552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462091.1;locus_tag=C9E94_RS17265;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_000731552.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	11983	12642	.	+	.	ID=gene-C9E94_RS17270;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=C9E94_RS17270;old_locus_tag=C9E94_17685
NZ_PYJR01000114.1	Protein Homology	CDS	11983	12642	.	+	0	ID=cds-WP_001221574.1;Parent=gene-C9E94_RS17270;Dbxref=GenBank:WP_001221574.1;Name=WP_001221574.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462092.1;locus_tag=C9E94_RS17270;product=quorum sensing response regulator transcription factor QseB;protein_id=WP_001221574.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	12639	13988	.	+	.	ID=gene-C9E94_RS17275;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=C9E94_RS17275;old_locus_tag=C9E94_17690
NZ_PYJR01000114.1	Protein Homology	CDS	12639	13988	.	+	0	ID=cds-WP_000779323.1;Parent=gene-C9E94_RS17275;Dbxref=GenBank:WP_000779323.1;Name=WP_000779323.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462093.1;locus_tag=C9E94_RS17275;product=quorum sensing histidine kinase QseC;protein_id=WP_000779323.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	14095	14676	.	+	.	ID=gene-C9E94_RS17280;Name=C9E94_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17280;old_locus_tag=C9E94_17695
NZ_PYJR01000114.1	Protein Homology	CDS	14095	14676	.	+	0	ID=cds-WP_000065416.1;Parent=gene-C9E94_RS17280;Dbxref=GenBank:WP_000065416.1;Name=WP_000065416.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=C9E94_RS17280;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_000065416.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	14708	15022	.	+	.	ID=gene-C9E94_RS17285;Name=C9E94_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17285;old_locus_tag=C9E94_17700
NZ_PYJR01000114.1	Protein Homology	CDS	14708	15022	.	+	0	ID=cds-WP_000958587.1;Parent=gene-C9E94_RS17285;Dbxref=GenBank:WP_000958587.1;Name=WP_000958587.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462095.1;locus_tag=C9E94_RS17285;product=putative quinol monooxygenase;protein_id=WP_000958587.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	15147	17039	.	-	.	ID=gene-C9E94_RS17290;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=C9E94_RS17290;old_locus_tag=C9E94_17705
NZ_PYJR01000114.1	Protein Homology	CDS	15147	17039	.	-	0	ID=cds-WP_000195318.1;Parent=gene-C9E94_RS17290;Dbxref=GenBank:WP_000195318.1;Name=WP_000195318.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462096.1;locus_tag=C9E94_RS17290;product=DNA topoisomerase IV subunit B;protein_id=WP_000195318.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	17067	17648	.	-	.	ID=gene-C9E94_RS17295;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=C9E94_RS17295;old_locus_tag=C9E94_17710
NZ_PYJR01000114.1	Protein Homology	CDS	17067	17648	.	-	0	ID=cds-WP_000105725.1;Parent=gene-C9E94_RS17295;Dbxref=GenBank:WP_000105725.1;Name=WP_000105725.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462097.1;locus_tag=C9E94_RS17295;product=esterase YqiA;protein_id=WP_000105725.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	17648	18475	.	-	.	ID=gene-C9E94_RS17300;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=C9E94_RS17300;old_locus_tag=C9E94_17715
NZ_PYJR01000114.1	Protein Homology	CDS	17648	18475	.	-	0	ID=cds-WP_000444735.1;Parent=gene-C9E94_RS17300;Dbxref=GenBank:WP_000444735.1;Name=WP_000444735.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462098.1;locus_tag=C9E94_RS17300;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_000444735.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	18500	18922	.	-	.	ID=gene-C9E94_RS17305;Name=C9E94_RS17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17305;old_locus_tag=C9E94_17720
NZ_PYJR01000114.1	Protein Homology	CDS	18500	18922	.	-	0	ID=cds-WP_000833404.1;Parent=gene-C9E94_RS17305;Dbxref=GenBank:WP_000833404.1;Name=WP_000833404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462099.1;locus_tag=C9E94_RS17305;product=DUF1249 family protein;protein_id=WP_000833404.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	18919	19551	.	-	.	ID=gene-C9E94_RS17310;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=C9E94_RS17310;old_locus_tag=C9E94_17725
NZ_PYJR01000114.1	Protein Homology	CDS	18919	19551	.	-	0	ID=cds-WP_001231950.1;Parent=gene-C9E94_RS17310;Dbxref=GenBank:WP_001231950.1;Name=WP_001231950.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462100.1;locus_tag=C9E94_RS17310;product=ADP-ribose diphosphatase;protein_id=WP_001231950.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	19752	21227	.	+	.	ID=gene-C9E94_RS17315;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=C9E94_RS17315;old_locus_tag=C9E94_17730
NZ_PYJR01000114.1	Protein Homology	CDS	19752	21227	.	+	0	ID=cds-WP_015899378.1;Parent=gene-C9E94_RS17315;Dbxref=GenBank:WP_015899378.1;Name=WP_015899378.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462101.3;locus_tag=C9E94_RS17315;product=outer membrane channel protein TolC;protein_id=WP_015899378.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	21440	22111	.	+	.	ID=gene-C9E94_RS17320;Name=C9E94_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17320;old_locus_tag=C9E94_17740
NZ_PYJR01000114.1	Protein Homology	CDS	21440	22111	.	+	0	ID=cds-WP_000831528.1;Parent=gene-C9E94_RS17320;Dbxref=GenBank:WP_000831528.1;Name=WP_000831528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462102.1;locus_tag=C9E94_RS17320;product=DUF1190 family protein;protein_id=WP_000831528.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	22117	23280	.	+	.	ID=gene-C9E94_RS17325;Name=C9E94_RS17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17325;old_locus_tag=C9E94_17745
NZ_PYJR01000114.1	Protein Homology	CDS	22117	23280	.	+	0	ID=cds-WP_000442833.1;Parent=gene-C9E94_RS17325;Dbxref=GenBank:WP_000442833.1;Name=WP_000442833.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462103.1;locus_tag=C9E94_RS17325;product=glutathionylspermidine synthase family protein;protein_id=WP_000442833.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	23342	24130	.	-	.	ID=gene-C9E94_RS17330;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=C9E94_RS17330;old_locus_tag=C9E94_17750
NZ_PYJR01000114.1	Protein Homology	CDS	23342	24130	.	-	0	ID=cds-WP_001520560.1;Parent=gene-C9E94_RS17330;Dbxref=GenBank:WP_001520560.1;Name=WP_001520560.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=C9E94_RS17330;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_001520560.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	24271	25044	.	+	.	ID=gene-C9E94_RS17335;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=C9E94_RS17335;old_locus_tag=C9E94_17755
NZ_PYJR01000114.1	Protein Homology	CDS	24271	25044	.	+	0	ID=cds-WP_000115874.1;Parent=gene-C9E94_RS17335;Dbxref=GenBank:WP_000115874.1;Name=WP_000115874.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462105.1;locus_tag=C9E94_RS17335;product=zinc transporter ZupT;protein_id=WP_000115874.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	25111	25287	.	-	.	ID=gene-C9E94_RS23745;Name=C9E94_RS23745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23745;old_locus_tag=C9E94_17760
NZ_PYJR01000114.1	Protein Homology	CDS	25111	25287	.	-	0	ID=cds-WP_000469259.1;Parent=gene-C9E94_RS23745;Dbxref=GenBank:WP_000469259.1;Name=WP_000469259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=C9E94_RS23745;product=hypothetical protein;protein_id=WP_000469259.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	25687	27483	.	+	.	ID=gene-C9E94_RS17340;Name=C9E94_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17340;old_locus_tag=C9E94_17765
NZ_PYJR01000114.1	Protein Homology	CDS	25687	27483	.	+	0	ID=cds-WP_000460259.1;Parent=gene-C9E94_RS17340;Dbxref=GenBank:WP_000460259.1;Name=WP_000460259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159766.1;locus_tag=C9E94_RS17340;product=aryl-sulfate sulfotransferase;protein_id=WP_000460259.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	27503	28174	.	+	.	ID=gene-C9E94_RS17345;Name=C9E94_RS17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17345;old_locus_tag=C9E94_17770
NZ_PYJR01000114.1	Protein Homology	CDS	27503	28174	.	+	0	ID=cds-WP_000096230.1;Parent=gene-C9E94_RS17345;Dbxref=GenBank:WP_000096230.1;Name=WP_000096230.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462108.1;locus_tag=C9E94_RS17345;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_000096230.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	28189	28866	.	+	.	ID=gene-C9E94_RS17350;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=C9E94_RS17350;old_locus_tag=C9E94_17775
NZ_PYJR01000114.1	Protein Homology	CDS	28189	28866	.	+	0	ID=cds-WP_000345576.1;Parent=gene-C9E94_RS17350;Dbxref=GenBank:WP_000345576.1;Name=WP_000345576.1;gbkey=CDS;gene=dsbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462109.1;locus_tag=C9E94_RS17350;product=protein-disulfide oxidoreductase DsbI;protein_id=WP_000345576.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	29037	29690	.	-	.	ID=gene-C9E94_RS17355;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=C9E94_RS17355;old_locus_tag=C9E94_17780
NZ_PYJR01000114.1	Protein Homology	CDS	29037	29690	.	-	0	ID=cds-WP_001076978.1;Parent=gene-C9E94_RS17355;Dbxref=GenBank:WP_001076978.1;Name=WP_001076978.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462110.1;locus_tag=C9E94_RS17355;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_001076978.1;transl_table=11
NZ_PYJR01000114.1	cmsearch	riboswitch	29796	29994	.	-	.	ID=id-NZ_PYJR01000114.1:29796..29994;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PYJR01000114.1	RefSeq	gene	30127	30423	.	+	.	ID=gene-C9E94_RS17360;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=C9E94_RS17360;old_locus_tag=C9E94_17785
NZ_PYJR01000114.1	Protein Homology	CDS	30127	30423	.	+	0	ID=cds-WP_000566824.1;Parent=gene-C9E94_RS17360;Dbxref=GenBank:WP_000566824.1;Name=WP_000566824.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566826.1;locus_tag=C9E94_RS17360;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_000566824.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	30498	30707	.	-	.	ID=gene-C9E94_RS17365;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=C9E94_RS17365;old_locus_tag=C9E94_17790
NZ_PYJR01000114.1	Protein Homology	CDS	30498	30707	.	-	0	ID=cds-WP_000928927.1;Parent=gene-C9E94_RS17365;Dbxref=GenBank:WP_000928927.1;Name=WP_000928927.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462112.1;locus_tag=C9E94_RS17365;product=cell surface composition regulator GlgS;protein_id=WP_000928927.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	30965	31585	.	+	.	ID=gene-C9E94_RS17370;Name=C9E94_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17370;old_locus_tag=C9E94_17795
NZ_PYJR01000114.1	Protein Homology	CDS	30965	31585	.	+	0	ID=cds-WP_000171739.1;Parent=gene-C9E94_RS17370;Dbxref=GenBank:WP_000171739.1;Name=WP_000171739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462113.1;locus_tag=C9E94_RS17370;product=OB-fold-containig protein;protein_id=WP_000171739.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	31604	33283	.	+	.	ID=gene-C9E94_RS17375;Name=C9E94_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17375;old_locus_tag=C9E94_17800
NZ_PYJR01000114.1	Protein Homology	CDS	31604	33283	.	+	0	ID=cds-WP_001748644.1;Parent=gene-C9E94_RS17375;Dbxref=GenBank:WP_001748644.1;Name=WP_001748644.1;Ontology_term=GO:0016020,GO:0016600;gbkey=CDS;go_component=membrane|0016020||IEA,flotillin complex|0016600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=C9E94_RS17375;product=flotillin family protein;protein_id=WP_001748644.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	33522	33581	.	+	.	ID=gene-C9E94_RS23510;Name=C9E94_RS23510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23510
NZ_PYJR01000114.1	Protein Homology	CDS	33522	33581	.	+	0	ID=cds-WP_001804776.1;Parent=gene-C9E94_RS23510;Dbxref=GenBank:WP_001804776.1;Name=WP_001804776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=C9E94_RS23510;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001804776.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	33741	35174	.	-	.	ID=gene-C9E94_RS17385;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=C9E94_RS17385;old_locus_tag=C9E94_17810
NZ_PYJR01000114.1	Protein Homology	CDS	33741	35174	.	-	0	ID=cds-WP_000867682.1;Parent=gene-C9E94_RS17385;Dbxref=GenBank:WP_000867682.1;Name=WP_000867682.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462115.1;locus_tag=C9E94_RS17385;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_000867682.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	35222	38065	.	-	.	ID=gene-C9E94_RS17390;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=C9E94_RS17390;old_locus_tag=C9E94_17815
NZ_PYJR01000114.1	Protein Homology	CDS	35222	38065	.	-	0	ID=cds-WP_135401145.1;Parent=gene-C9E94_RS17390;Dbxref=GenBank:WP_135401145.1;Name=WP_135401145.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462116.1;locus_tag=C9E94_RS17390;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_135401145.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	38183	39484	.	-	.	ID=gene-C9E94_RS17395;Name=C9E94_RS17395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17395;old_locus_tag=C9E94_17820
NZ_PYJR01000114.1	Protein Homology	CDS	38183	39484	.	-	0	ID=cds-WP_000046223.1;Parent=gene-C9E94_RS17395;Dbxref=GenBank:WP_000046223.1;Name=WP_000046223.1;Ontology_term=GO:0046872,GO:0050355;gbkey=CDS;go_function=metal ion binding|0046872||IEA,inorganic triphosphate phosphatase activity|0050355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462117.1;locus_tag=C9E94_RS17395;product=CYTH domain-containing protein;protein_id=WP_000046223.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	39726	40340	.	+	.	ID=gene-C9E94_RS17400;Name=C9E94_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17400;old_locus_tag=C9E94_17830
NZ_PYJR01000114.1	Protein Homology	CDS	39726	40340	.	+	0	ID=cds-WP_001125344.1;Parent=gene-C9E94_RS17400;Dbxref=GenBank:WP_001125344.1;Name=WP_001125344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462118.1;locus_tag=C9E94_RS17400;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_001125344.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	40403	41644	.	+	.	ID=gene-C9E94_RS17405;Name=C9E94_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17405;old_locus_tag=C9E94_17835
NZ_PYJR01000114.1	Protein Homology	CDS	40403	41644	.	+	0	ID=cds-WP_000708447.1;Parent=gene-C9E94_RS17405;Dbxref=GenBank:WP_000708447.1;Name=WP_000708447.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462119.1;locus_tag=C9E94_RS17405;product=multifunctional CCA addition/repair protein;protein_id=WP_000708447.1;transl_table=11
NZ_PYJR01000114.1	RefSeq	pseudogene	41665	41749	.	+	.	ID=gene-C9E94_RS23925;Name=C9E94_RS23925;end_range=41749,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23925;partial=true;pseudo=true;start_range=.,41665
NZ_PYJR01000114.1	Protein Homology	CDS	41665	41749	.	+	0	ID=cds-C9E94_RS23925;Parent=gene-C9E94_RS23925;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=41749,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=C9E94_RS23925;partial=true;product=hypothetical protein;pseudo=true;start_range=.,41665;transl_table=11
NZ_PYJR01000114.1	RefSeq	gene	41748	42569	.	-	.	ID=gene-C9E94_RS17410;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=C9E94_RS17410;old_locus_tag=C9E94_17840
NZ_PYJR01000114.1	Protein Homology	CDS	41748	42569	.	-	0	ID=cds-WP_001281933.1;Parent=gene-C9E94_RS17410;Dbxref=GenBank:WP_001281933.1;Name=WP_001281933.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=C9E94_RS17410;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001281933.1;transl_table=11
##sequence-region NZ_PYJR01000046.1 1 154072
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000046.1	RefSeq	region	1	154072	.	+	.	ID=NZ_PYJR01000046.1:1..154072;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000046.1	RefSeq	gene	294	521	.	+	.	ID=gene-C9E94_RS05455;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=C9E94_RS05455;old_locus_tag=C9E94_05605
NZ_PYJR01000046.1	Protein Homology	CDS	294	521	.	+	0	ID=cds-WP_001160955.1;Parent=gene-C9E94_RS05455;Dbxref=GenBank:WP_001160955.1;Name=WP_001160955.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462408.1;locus_tag=C9E94_RS05455;product=ferrous iron transporter A;protein_id=WP_001160955.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	540	2858	.	+	.	ID=gene-C9E94_RS05460;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=C9E94_RS05460;old_locus_tag=C9E94_05610
NZ_PYJR01000046.1	Protein Homology	CDS	540	2858	.	+	0	ID=cds-WP_000736973.1;Parent=gene-C9E94_RS05460;Dbxref=GenBank:WP_000736973.1;Name=WP_000736973.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462409.1;locus_tag=C9E94_RS05460;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_000736973.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	2871	3107	.	+	.	ID=gene-C9E94_RS05465;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=C9E94_RS05465;old_locus_tag=C9E94_05615
NZ_PYJR01000046.1	Protein Homology	CDS	2871	3107	.	+	0	ID=cds-WP_000157589.1;Parent=gene-C9E94_RS05465;Dbxref=GenBank:WP_000157589.1;Name=WP_000157589.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462410.1;locus_tag=C9E94_RS05465;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_000157589.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	3342	4256	.	+	.	ID=gene-C9E94_RS05470;Name=C9E94_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05470;old_locus_tag=C9E94_05620
NZ_PYJR01000046.1	Protein Homology	CDS	3342	4256	.	+	0	ID=cds-WP_000235959.1;Parent=gene-C9E94_RS05470;Dbxref=GenBank:WP_000235959.1;Name=WP_000235959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462411.1;locus_tag=C9E94_RS05470;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000235959.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	4292	5062	.	-	.	ID=gene-C9E94_RS05475;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=C9E94_RS05475;old_locus_tag=C9E94_05625
NZ_PYJR01000046.1	Protein Homology	CDS	4292	5062	.	-	0	ID=cds-WP_000998145.1;Parent=gene-C9E94_RS05475;Dbxref=GenBank:WP_000998145.1;Name=WP_000998145.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462412.1;locus_tag=C9E94_RS05475;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_000998145.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	5100	5783	.	+	.	ID=gene-C9E94_RS05480;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=C9E94_RS05480;old_locus_tag=C9E94_05630
NZ_PYJR01000046.1	Protein Homology	CDS	5100	5783	.	+	0	ID=cds-WP_000958742.1;Parent=gene-C9E94_RS05480;Dbxref=GenBank:WP_000958742.1;Name=WP_000958742.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462413.1;locus_tag=C9E94_RS05480;product=DNA utilization protein GntX;protein_id=WP_000958742.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	5842	6417	.	+	.	ID=gene-C9E94_RS05485;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=C9E94_RS05485;old_locus_tag=C9E94_05635
NZ_PYJR01000046.1	Protein Homology	CDS	5842	6417	.	+	0	ID=cds-WP_000619387.1;Parent=gene-C9E94_RS05485;Dbxref=GenBank:WP_000619387.1;Name=WP_000619387.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=C9E94_RS05485;product=Fe-S biogenesis protein NfuA;protein_id=WP_000619387.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	6794	8110	.	+	.	ID=gene-C9E94_RS05490;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=C9E94_RS05490;old_locus_tag=C9E94_05640
NZ_PYJR01000046.1	Protein Homology	CDS	6794	8110	.	+	0	ID=cds-WP_001131741.1;Parent=gene-C9E94_RS05490;Dbxref=GenBank:WP_001131741.1;Name=WP_001131741.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462415.1;locus_tag=C9E94_RS05490;product=gluconate transporter;protein_id=WP_001131741.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	8229	10307	.	-	.	ID=gene-C9E94_RS05495;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=C9E94_RS05495;old_locus_tag=C9E94_05645
NZ_PYJR01000046.1	Protein Homology	CDS	8229	10307	.	-	0	ID=cds-WP_023993866.1;Parent=gene-C9E94_RS05495;Dbxref=GenBank:WP_023993866.1;Name=WP_023993866.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462416.1;locus_tag=C9E94_RS05495;product=4-alpha-glucanotransferase;protein_id=WP_023993866.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	10317	12710	.	-	.	ID=gene-C9E94_RS05500;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=C9E94_RS05500;old_locus_tag=C9E94_05650
NZ_PYJR01000046.1	Protein Homology	CDS	10317	12710	.	-	0	ID=cds-WP_135400859.1;Parent=gene-C9E94_RS05500;Dbxref=GenBank:WP_135400859.1;Name=WP_135400859.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462417.1;locus_tag=C9E94_RS05500;product=maltodextrin phosphorylase;protein_id=WP_135400859.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	13305	16010	.	+	.	ID=gene-C9E94_RS05505;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=C9E94_RS05505;old_locus_tag=C9E94_05655
NZ_PYJR01000046.1	Protein Homology	CDS	13305	16010	.	+	0	ID=cds-WP_000907030.1;Parent=gene-C9E94_RS05505;Dbxref=GenBank:WP_000907030.1;Name=WP_000907030.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=C9E94_RS05505;product=HTH-type transcriptional regulator MalT;protein_id=WP_000907030.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	16079	16837	.	-	.	ID=gene-C9E94_RS05510;Name=C9E94_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05510;old_locus_tag=C9E94_05660
NZ_PYJR01000046.1	Protein Homology	CDS	16079	16837	.	-	0	ID=cds-WP_000815085.1;Parent=gene-C9E94_RS05510;Dbxref=GenBank:WP_000815085.1;Name=WP_000815085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=C9E94_RS05510;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_000815085.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	16931	17761	.	-	.	ID=gene-C9E94_RS05515;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=C9E94_RS05515;old_locus_tag=C9E94_05665
NZ_PYJR01000046.1	Protein Homology	CDS	16931	17761	.	-	0	ID=cds-WP_000928702.1;Parent=gene-C9E94_RS05515;Dbxref=GenBank:WP_000928702.1;Name=WP_000928702.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462426.1;locus_tag=C9E94_RS05515;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_000928702.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	17837	18163	.	-	.	ID=gene-C9E94_RS05520;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=C9E94_RS05520;old_locus_tag=C9E94_05670
NZ_PYJR01000046.1	Protein Homology	CDS	17837	18163	.	-	0	ID=cds-WP_000434523.1;Parent=gene-C9E94_RS05520;Dbxref=GenBank:WP_000434523.1;Name=WP_000434523.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462427.1;locus_tag=C9E94_RS05520;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_000434523.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	18362	19870	.	+	.	ID=gene-C9E94_RS05525;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=C9E94_RS05525;old_locus_tag=C9E94_05675
NZ_PYJR01000046.1	Protein Homology	CDS	18362	19870	.	+	0	ID=cds-WP_135400860.1;Parent=gene-C9E94_RS05525;Dbxref=GenBank:WP_135400860.1;Name=WP_135400860.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462428.1;locus_tag=C9E94_RS05525;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_135400860.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	19917	20462	.	-	.	ID=gene-C9E94_RS05530;Name=C9E94_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05530;old_locus_tag=C9E94_05680
NZ_PYJR01000046.1	Protein Homology	CDS	19917	20462	.	-	0	ID=cds-WP_135400861.1;Parent=gene-C9E94_RS05530;Dbxref=GenBank:WP_135400861.1;Name=WP_135400861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462429.1;locus_tag=C9E94_RS05530;product=hypothetical protein;protein_id=WP_135400861.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	20472	21965	.	-	.	ID=gene-C9E94_RS05535;Name=C9E94_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05535;old_locus_tag=C9E94_05685
NZ_PYJR01000046.1	Protein Homology	CDS	20472	21965	.	-	0	ID=cds-WP_135400862.1;Parent=gene-C9E94_RS05535;Dbxref=GenBank:WP_135400862.1;Name=WP_135400862.1;Ontology_term=GO:0006817,GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551775.1;locus_tag=C9E94_RS05535;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_135400862.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	22095	24542	.	-	.	ID=gene-C9E94_RS05540;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=C9E94_RS05540;old_locus_tag=C9E94_05690
NZ_PYJR01000046.1	Protein Homology	CDS	22095	24542	.	-	0	ID=cds-WP_000993424.1;Parent=gene-C9E94_RS05540;Dbxref=GenBank:WP_000993424.1;Name=WP_000993424.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436446.1;locus_tag=C9E94_RS05540;product=glycogen phosphorylase;protein_id=WP_000993424.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	24562	25995	.	-	.	ID=gene-C9E94_RS05545;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=C9E94_RS05545;old_locus_tag=C9E94_05695
NZ_PYJR01000046.1	Protein Homology	CDS	24562	25995	.	-	0	ID=cds-WP_001197669.1;Parent=gene-C9E94_RS05545;Dbxref=GenBank:WP_001197669.1;Name=WP_001197669.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462436.1;locus_tag=C9E94_RS05545;product=glycogen synthase GlgA;protein_id=WP_001197669.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	25995	27290	.	-	.	ID=gene-C9E94_RS05550;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=C9E94_RS05550;old_locus_tag=C9E94_05700
NZ_PYJR01000046.1	Protein Homology	CDS	25995	27290	.	-	0	ID=cds-WP_000253994.1;Parent=gene-C9E94_RS05550;Dbxref=GenBank:WP_000253994.1;Name=WP_000253994.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462437.1;locus_tag=C9E94_RS05550;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000253994.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	27305	29281	.	-	.	ID=gene-C9E94_RS05555;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=C9E94_RS05555;old_locus_tag=C9E94_05705
NZ_PYJR01000046.1	Protein Homology	CDS	27305	29281	.	-	0	ID=cds-WP_000192491.1;Parent=gene-C9E94_RS05555;Dbxref=GenBank:WP_000192491.1;Name=WP_000192491.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462438.1;locus_tag=C9E94_RS05555;product=glycogen debranching protein GlgX;protein_id=WP_000192491.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	29278	31464	.	-	.	ID=gene-C9E94_RS05560;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=C9E94_RS05560;old_locus_tag=C9E94_05710
NZ_PYJR01000046.1	Protein Homology	CDS	29278	31464	.	-	0	ID=cds-WP_000098548.1;Parent=gene-C9E94_RS05560;Dbxref=GenBank:WP_000098548.1;Name=WP_000098548.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462439.1;locus_tag=C9E94_RS05560;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_000098548.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	31811	32917	.	-	.	ID=gene-C9E94_RS05565;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=C9E94_RS05565;old_locus_tag=C9E94_05715
NZ_PYJR01000046.1	Protein Homology	CDS	31811	32917	.	-	0	ID=cds-WP_000799940.1;Parent=gene-C9E94_RS05565;Dbxref=GenBank:WP_000799940.1;Name=WP_000799940.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462440.1;locus_tag=C9E94_RS05565;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799940.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	pseudogene	33152	33226	.	+	.	ID=gene-C9E94_RS23865;Name=C9E94_RS23865;end_range=33226,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23865;partial=true;pseudo=true
NZ_PYJR01000046.1	Protein Homology	CDS	33152	33226	.	+	0	ID=cds-C9E94_RS23865;Parent=gene-C9E94_RS23865;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=33226,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312306.1;locus_tag=C9E94_RS23865;partial=true;product=MarC family protein;pseudo=true;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	33341	34681	.	-	.	ID=gene-C9E94_RS05575;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=C9E94_RS05575;old_locus_tag=C9E94_05725
NZ_PYJR01000046.1	Protein Homology	CDS	33341	34681	.	-	0	ID=cds-WP_135400863.1;Parent=gene-C9E94_RS05575;Dbxref=GenBank:WP_135400863.1;Name=WP_135400863.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462442.1;locus_tag=C9E94_RS05575;product=gluconate transporter;protein_id=WP_135400863.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	34678	35211	.	-	.	ID=gene-C9E94_RS05580;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=C9E94_RS05580;old_locus_tag=C9E94_05730
NZ_PYJR01000046.1	Protein Homology	CDS	34678	35211	.	-	0	ID=cds-WP_023238369.1;Parent=gene-C9E94_RS05580;Dbxref=GenBank:WP_023238369.1;Name=WP_023238369.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462443.1;locus_tag=C9E94_RS05580;product=gluconokinase;protein_id=WP_023238369.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	35350	36345	.	-	.	ID=gene-C9E94_RS05585;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=C9E94_RS05585;old_locus_tag=C9E94_05735
NZ_PYJR01000046.1	Protein Homology	CDS	35350	36345	.	-	0	ID=cds-WP_000730238.1;Parent=gene-C9E94_RS05585;Dbxref=GenBank:WP_000730238.1;Name=WP_000730238.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=C9E94_RS05585;product=gluconate operon transcriptional repressor GntR;protein_id=WP_000730238.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	36475	37170	.	-	.	ID=gene-C9E94_RS05590;Name=C9E94_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05590;old_locus_tag=C9E94_05740
NZ_PYJR01000046.1	Protein Homology	CDS	36475	37170	.	-	0	ID=cds-WP_000639789.1;Parent=gene-C9E94_RS05590;Dbxref=GenBank:WP_000639789.1;Name=WP_000639789.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=C9E94_RS05590;product=pirin family protein;protein_id=WP_000639789.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	37294	38331	.	-	.	ID=gene-C9E94_RS05595;Name=C9E94_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05595;old_locus_tag=C9E94_05745
NZ_PYJR01000046.1	Protein Homology	CDS	37294	38331	.	-	0	ID=cds-WP_000172397.1;Parent=gene-C9E94_RS05595;Dbxref=GenBank:WP_000172397.1;Name=WP_000172397.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462446.1;locus_tag=C9E94_RS05595;product=oxidoreductase;protein_id=WP_000172397.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	38799	39287	.	+	.	ID=gene-C9E94_RS05600;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=C9E94_RS05600;old_locus_tag=C9E94_05755
NZ_PYJR01000046.1	Protein Homology	CDS	38799	39287	.	+	0	ID=cds-WP_001290278.1;Parent=gene-C9E94_RS05600;Dbxref=GenBank:WP_001290278.1;Name=WP_001290278.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462447.1;locus_tag=C9E94_RS05600;product=N-acetyltransferase;protein_id=WP_001290278.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	39552	40766	.	+	.	ID=gene-C9E94_RS05605;Name=C9E94_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05605;old_locus_tag=C9E94_05760
NZ_PYJR01000046.1	Protein Homology	CDS	39552	40766	.	+	0	ID=cds-WP_135400864.1;Parent=gene-C9E94_RS05605;Dbxref=GenBank:WP_135400864.1;Name=WP_135400864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462448.3;locus_tag=C9E94_RS05605;product=PfkB family carbohydrate kinase;protein_id=WP_135400864.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	40782	41543	.	+	.	ID=gene-C9E94_RS05610;Name=C9E94_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05610;old_locus_tag=C9E94_05765
NZ_PYJR01000046.1	Protein Homology	CDS	40782	41543	.	+	0	ID=cds-WP_001066508.1;Parent=gene-C9E94_RS05610;Dbxref=GenBank:WP_001066508.1;Name=WP_001066508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462449.1;locus_tag=C9E94_RS05610;product=glutamine amidotransferase;protein_id=WP_001066508.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	41597	42568	.	+	.	ID=gene-C9E94_RS05615;Name=C9E94_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05615;old_locus_tag=C9E94_05770
NZ_PYJR01000046.1	Protein Homology	CDS	41597	42568	.	+	0	ID=cds-WP_001038949.1;Parent=gene-C9E94_RS05615;Dbxref=GenBank:WP_001038949.1;Name=WP_001038949.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462450.1;locus_tag=C9E94_RS05615;product=DMT family transporter;protein_id=WP_001038949.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	42565	43599	.	+	.	ID=gene-C9E94_RS05620;Name=C9E94_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05620;old_locus_tag=C9E94_05775
NZ_PYJR01000046.1	Protein Homology	CDS	42565	43599	.	+	0	ID=cds-WP_000675710.1;Parent=gene-C9E94_RS05620;Dbxref=GenBank:WP_000675710.1;Name=WP_000675710.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462451.1;locus_tag=C9E94_RS05620;product=phosphotriesterase family protein;protein_id=WP_000675710.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	43644	45386	.	-	.	ID=gene-C9E94_RS05625;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=C9E94_RS05625;old_locus_tag=C9E94_05780
NZ_PYJR01000046.1	Protein Homology	CDS	43644	45386	.	-	0	ID=cds-WP_135400865.1;Parent=gene-C9E94_RS05625;Dbxref=GenBank:WP_135400865.1;Name=WP_135400865.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462452.1;locus_tag=C9E94_RS05625;product=gamma-glutamyltransferase;protein_id=WP_135400865.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	45512	45928	.	+	.	ID=gene-C9E94_RS05630;Name=C9E94_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05630;old_locus_tag=C9E94_05785
NZ_PYJR01000046.1	Protein Homology	CDS	45512	45928	.	+	0	ID=cds-WP_000826041.1;Parent=gene-C9E94_RS05630;Dbxref=GenBank:WP_000826041.1;Name=WP_000826041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462453.1;locus_tag=C9E94_RS05630;product=DUF2756 family protein;protein_id=WP_000826041.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	45941	46681	.	-	.	ID=gene-C9E94_RS05635;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=C9E94_RS05635;old_locus_tag=C9E94_05790
NZ_PYJR01000046.1	Protein Homology	CDS	45941	46681	.	-	0	ID=cds-WP_000073545.1;Parent=gene-C9E94_RS05635;Dbxref=GenBank:WP_000073545.1;Name=WP_000073545.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462454.1;locus_tag=C9E94_RS05635;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000073545.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	46678	47748	.	-	.	ID=gene-C9E94_RS05640;Name=C9E94_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05640;old_locus_tag=C9E94_05795
NZ_PYJR01000046.1	Protein Homology	CDS	46678	47748	.	-	0	ID=cds-WP_135400866.1;Parent=gene-C9E94_RS05640;Dbxref=GenBank:WP_135400866.1;Name=WP_135400866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462455.1;locus_tag=C9E94_RS05640;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_135400866.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	47750	48595	.	-	.	ID=gene-C9E94_RS05645;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=C9E94_RS05645;old_locus_tag=C9E94_05800
NZ_PYJR01000046.1	Protein Homology	CDS	47750	48595	.	-	0	ID=cds-WP_000572196.1;Parent=gene-C9E94_RS05645;Dbxref=GenBank:WP_000572196.1;Name=WP_000572196.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=C9E94_RS05645;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_000572196.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	48592	49479	.	-	.	ID=gene-C9E94_RS05650;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=C9E94_RS05650;old_locus_tag=C9E94_05805
NZ_PYJR01000046.1	Protein Homology	CDS	48592	49479	.	-	0	ID=cds-WP_000099303.1;Parent=gene-C9E94_RS05650;Dbxref=GenBank:WP_000099303.1;Name=WP_000099303.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=C9E94_RS05650;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_000099303.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	49584	50900	.	-	.	ID=gene-C9E94_RS05655;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=C9E94_RS05655;old_locus_tag=C9E94_05810
NZ_PYJR01000046.1	Protein Homology	CDS	49584	50900	.	-	0	ID=cds-WP_000624747.1;Parent=gene-C9E94_RS05655;Dbxref=GenBank:WP_000624747.1;Name=WP_000624747.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462458.1;locus_tag=C9E94_RS05655;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_000624747.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	51159	51527	.	-	.	ID=gene-C9E94_RS05660;Name=C9E94_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05660;old_locus_tag=C9E94_05815
NZ_PYJR01000046.1	Protein Homology	CDS	51159	51527	.	-	0	ID=cds-WP_000174964.1;Parent=gene-C9E94_RS05660;Dbxref=GenBank:WP_000174964.1;Name=WP_000174964.1;Ontology_term=GO:0016301,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=kinase activity|0016301||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462459.1;locus_tag=C9E94_RS05660;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WP_000174964.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	51524	51745	.	-	.	ID=gene-C9E94_RS05665;Name=C9E94_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05665;old_locus_tag=C9E94_05820
NZ_PYJR01000046.1	Protein Homology	CDS	51524	51745	.	-	0	ID=cds-WP_001522145.1;Parent=gene-C9E94_RS05665;Dbxref=GenBank:WP_001522145.1;Name=WP_001522145.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229268.1;locus_tag=C9E94_RS05665;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_001522145.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	51876	52589	.	-	.	ID=gene-C9E94_RS05670;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=C9E94_RS05670;old_locus_tag=C9E94_05825
NZ_PYJR01000046.1	Protein Homology	CDS	51876	52589	.	-	0	ID=cds-WP_000416116.1;Parent=gene-C9E94_RS05670;Dbxref=GenBank:WP_000416116.1;Name=WP_000416116.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462461.1;locus_tag=C9E94_RS05670;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_000416116.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	52591	53358	.	-	.	ID=gene-C9E94_RS05675;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=C9E94_RS05675;old_locus_tag=C9E94_05830
NZ_PYJR01000046.1	Protein Homology	CDS	52591	53358	.	-	0	ID=cds-WP_000082083.1;Parent=gene-C9E94_RS05675;Dbxref=GenBank:WP_000082083.1;Name=WP_000082083.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=C9E94_RS05675;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_000082083.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	53355	54632	.	-	.	ID=gene-C9E94_RS05680;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=C9E94_RS05680;old_locus_tag=C9E94_05835
NZ_PYJR01000046.1	Protein Homology	CDS	53355	54632	.	-	0	ID=cds-WP_000803764.1;Parent=gene-C9E94_RS05680;Dbxref=GenBank:WP_000803764.1;Name=WP_000803764.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462463.1;locus_tag=C9E94_RS05680;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_000803764.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	54629	55555	.	-	.	ID=gene-C9E94_RS05685;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=C9E94_RS05685;old_locus_tag=C9E94_05840
NZ_PYJR01000046.1	Protein Homology	CDS	54629	55555	.	-	0	ID=cds-WP_000003007.1;Parent=gene-C9E94_RS05685;Dbxref=GenBank:WP_000003007.1;Name=WP_000003007.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=C9E94_RS05685;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_000003007.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	55615	56724	.	-	.	ID=gene-C9E94_RS05690;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=C9E94_RS05690;old_locus_tag=C9E94_05845
NZ_PYJR01000046.1	Protein Homology	CDS	55615	56724	.	-	0	ID=cds-WP_000822976.1;Parent=gene-C9E94_RS05690;Dbxref=GenBank:WP_000822976.1;Name=WP_000822976.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462465.1;locus_tag=C9E94_RS05690;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_000822976.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	57146	57529	.	+	.	ID=gene-C9E94_RS05695;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=C9E94_RS05695;old_locus_tag=C9E94_05850
NZ_PYJR01000046.1	Protein Homology	CDS	57146	57529	.	+	0	ID=cds-WP_000778873.1;Parent=gene-C9E94_RS05695;Dbxref=GenBank:WP_000778873.1;Name=WP_000778873.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462466.1;locus_tag=C9E94_RS05695;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_000778873.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	57507	57641	.	+	.	ID=gene-C9E94_RS05700;Name=C9E94_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05700;old_locus_tag=C9E94_05855
NZ_PYJR01000046.1	Protein Homology	CDS	57507	57641	.	+	0	ID=cds-WP_001517957.1;Parent=gene-C9E94_RS05700;Dbxref=GenBank:WP_001517957.1;Name=WP_001517957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462467.1;locus_tag=C9E94_RS05700;product=hypothetical protein;protein_id=WP_001517957.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	57725	58828	.	-	.	ID=gene-C9E94_RS05705;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=C9E94_RS05705;old_locus_tag=C9E94_05860
NZ_PYJR01000046.1	Protein Homology	CDS	57725	58828	.	-	0	ID=cds-WP_001533929.1;Parent=gene-C9E94_RS05705;Dbxref=GenBank:WP_001533929.1;Name=WP_001533929.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=C9E94_RS05705;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_001533929.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	59150	60004	.	-	.	ID=gene-C9E94_RS05710;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=C9E94_RS05710;old_locus_tag=C9E94_05865
NZ_PYJR01000046.1	Protein Homology	CDS	59150	60004	.	-	0	ID=cds-WP_000159621.1;Parent=gene-C9E94_RS05710;Dbxref=GenBank:WP_000159621.1;Name=WP_000159621.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462469.1;locus_tag=C9E94_RS05710;product=RNA polymerase sigma factor RpoH;protein_id=WP_000159621.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	60250	61305	.	-	.	ID=gene-C9E94_RS05715;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=C9E94_RS05715;old_locus_tag=C9E94_05870
NZ_PYJR01000046.1	Protein Homology	CDS	60250	61305	.	-	0	ID=cds-WP_001081707.1;Parent=gene-C9E94_RS05715;Dbxref=GenBank:WP_001081707.1;Name=WP_001081707.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462470.1;locus_tag=C9E94_RS05715;product=permease-like cell division protein FtsX;protein_id=WP_001081707.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	61298	61966	.	-	.	ID=gene-C9E94_RS05720;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=C9E94_RS05720;old_locus_tag=C9E94_05875
NZ_PYJR01000046.1	Protein Homology	CDS	61298	61966	.	-	0	ID=cds-WP_000617729.1;Parent=gene-C9E94_RS05720;Dbxref=GenBank:WP_000617729.1;Name=WP_000617729.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462471.1;locus_tag=C9E94_RS05720;product=cell division ATP-binding protein FtsE;protein_id=WP_000617729.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	61969	63444	.	-	.	ID=gene-C9E94_RS05725;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=C9E94_RS05725;old_locus_tag=C9E94_05880
NZ_PYJR01000046.1	Protein Homology	CDS	61969	63444	.	-	0	ID=cds-WP_115198252.1;Parent=gene-C9E94_RS05725;Dbxref=GenBank:WP_115198252.1;Name=WP_115198252.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462472.1;locus_tag=C9E94_RS05725;product=signal recognition particle-docking protein FtsY;protein_id=WP_115198252.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	63570	64166	.	+	.	ID=gene-C9E94_RS05730;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=C9E94_RS05730;old_locus_tag=C9E94_05885
NZ_PYJR01000046.1	Protein Homology	CDS	63570	64166	.	+	0	ID=cds-WP_000743275.1;Parent=gene-C9E94_RS05730;Dbxref=GenBank:WP_000743275.1;Name=WP_000743275.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462473.1;locus_tag=C9E94_RS05730;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_000743275.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	64156	64425	.	+	.	ID=gene-C9E94_RS05735;Name=C9E94_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05735;old_locus_tag=C9E94_05890
NZ_PYJR01000046.1	Protein Homology	CDS	64156	64425	.	+	0	ID=cds-WP_000906757.1;Parent=gene-C9E94_RS05735;Dbxref=GenBank:WP_000906757.1;Name=WP_000906757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=C9E94_RS05735;product=DUF1145 family protein;protein_id=WP_000906757.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	64447	64818	.	-	.	ID=gene-C9E94_RS05740;Name=C9E94_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05740;old_locus_tag=C9E94_05895
NZ_PYJR01000046.1	Protein Homology	CDS	64447	64818	.	-	0	ID=cds-WP_000042857.1;Parent=gene-C9E94_RS05740;Dbxref=GenBank:WP_000042857.1;Name=WP_000042857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462475.1;locus_tag=C9E94_RS05740;product=DUF2500 domain-containing protein;protein_id=WP_000042857.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	64960	65586	.	+	.	ID=gene-C9E94_RS05745;Name=C9E94_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05745;old_locus_tag=C9E94_05900
NZ_PYJR01000046.1	Protein Homology	CDS	64960	65586	.	+	0	ID=cds-WP_000964735.1;Parent=gene-C9E94_RS05745;Dbxref=GenBank:WP_000964735.1;Name=WP_000964735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462476.1;locus_tag=C9E94_RS05745;product=lysoplasmalogenase;protein_id=WP_000964735.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	65667	67865	.	+	.	ID=gene-C9E94_RS05750;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=C9E94_RS05750;old_locus_tag=C9E94_05905
NZ_PYJR01000046.1	Protein Homology	CDS	65667	67865	.	+	0	ID=cds-WP_135400867.1;Parent=gene-C9E94_RS05750;Dbxref=GenBank:WP_135400867.1;Name=WP_135400867.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462477.1;locus_tag=C9E94_RS05750;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_135400867.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	68065	69708	.	+	.	ID=gene-C9E94_RS05755;Name=tcp;gbkey=Gene;gene=tcp;gene_biotype=protein_coding;locus_tag=C9E94_RS05755;old_locus_tag=C9E94_05910
NZ_PYJR01000046.1	Protein Homology	CDS	68065	69708	.	+	0	ID=cds-WP_000789670.1;Parent=gene-C9E94_RS05755;Dbxref=GenBank:WP_000789670.1;Name=WP_000789670.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888;gbkey=CDS;gene=tcp;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462478.1;locus_tag=C9E94_RS05755;product=methyl-accepting chemotaxis citrate transducer;protein_id=WP_000789670.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	69732	69977	.	-	.	ID=gene-C9E94_RS05760;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=C9E94_RS05760;old_locus_tag=C9E94_05915
NZ_PYJR01000046.1	Protein Homology	CDS	69732	69977	.	-	0	ID=cds-WP_001541054.1;Parent=gene-C9E94_RS05760;Dbxref=GenBank:WP_001541054.1;Name=WP_001541054.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462479.1;locus_tag=C9E94_RS05760;product=sulfurtransferase TusA;protein_id=WP_001541054.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	70147	70812	.	+	.	ID=gene-C9E94_RS05765;Name=C9E94_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05765;old_locus_tag=C9E94_05920
NZ_PYJR01000046.1	Protein Homology	CDS	70147	70812	.	+	0	ID=cds-WP_001531644.1;Parent=gene-C9E94_RS05765;Dbxref=GenBank:WP_001531644.1;Name=WP_001531644.1;Ontology_term=GO:0160254;gbkey=CDS;go_process=tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors|0160254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462480.1;locus_tag=C9E94_RS05765;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_001531644.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	70885	71442	.	+	.	ID=gene-C9E94_RS05770;Name=C9E94_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05770;old_locus_tag=C9E94_05925
NZ_PYJR01000046.1	Protein Homology	CDS	70885	71442	.	+	0	ID=cds-WP_001245277.1;Parent=gene-C9E94_RS05770;Dbxref=GenBank:WP_001245277.1;Name=WP_001245277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462481.1;locus_tag=C9E94_RS05770;product=DcrB family lipoprotein;protein_id=WP_001245277.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	pseudogene	71446	72704	.	-	.	ID=gene-C9E94_RS05775;Name=C9E94_RS05775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS05775;old_locus_tag=C9E94_05930;pseudo=true
NZ_PYJR01000046.1	Protein Homology	CDS	71446	72704	.	-	0	ID=cds-C9E94_RS05775;Parent=gene-C9E94_RS05775;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462482.3;locus_tag=C9E94_RS05775;product=MFS transporter;pseudo=true;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	72794	73843	.	+	.	ID=gene-C9E94_RS05780;Name=C9E94_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05780;old_locus_tag=C9E94_05935
NZ_PYJR01000046.1	Protein Homology	CDS	72794	73843	.	+	0	ID=cds-WP_000179588.1;Parent=gene-C9E94_RS05780;Dbxref=GenBank:WP_000179588.1;Name=WP_000179588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462483.1;locus_tag=C9E94_RS05780;product=AI-2E family transporter;protein_id=WP_000179588.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	73895	74473	.	+	.	ID=gene-C9E94_RS05785;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=C9E94_RS05785;old_locus_tag=C9E94_05940
NZ_PYJR01000046.1	Protein Homology	CDS	73895	74473	.	+	0	ID=cds-WP_000284371.1;Parent=gene-C9E94_RS05785;Dbxref=GenBank:WP_000284371.1;Name=WP_000284371.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462484.1;locus_tag=C9E94_RS05785;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_000284371.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	74565	74966	.	+	.	ID=gene-C9E94_RS05790;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=C9E94_RS05790;old_locus_tag=C9E94_05945
NZ_PYJR01000046.1	Protein Homology	CDS	74565	74966	.	+	0	ID=cds-WP_001190057.1;Parent=gene-C9E94_RS05790;Dbxref=GenBank:WP_001190057.1;Name=WP_001190057.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462485.1;locus_tag=C9E94_RS05790;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_001190057.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	75068	76192	.	-	.	ID=gene-C9E94_RS05795;Name=C9E94_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05795;old_locus_tag=C9E94_05950
NZ_PYJR01000046.1	Protein Homology	CDS	75068	76192	.	-	0	ID=cds-WP_001214753.1;Parent=gene-C9E94_RS05795;Dbxref=GenBank:WP_001214753.1;Name=WP_001214753.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=C9E94_RS05795;product=ABC transporter permease;protein_id=WP_001214753.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	76192	78933	.	-	.	ID=gene-C9E94_RS05800;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=C9E94_RS05800;old_locus_tag=C9E94_05955
NZ_PYJR01000046.1	Protein Homology	CDS	76192	78933	.	-	0	ID=cds-WP_000202486.1;Parent=gene-C9E94_RS05800;Dbxref=GenBank:WP_000202486.1;Name=WP_000202486.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709254.1;locus_tag=C9E94_RS05800;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_000202486.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	78930	79997	.	-	.	ID=gene-C9E94_RS05805;Name=C9E94_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05805;old_locus_tag=C9E94_05960
NZ_PYJR01000046.1	Protein Homology	CDS	78930	79997	.	-	0	ID=cds-WP_000359838.1;Parent=gene-C9E94_RS05805;Dbxref=GenBank:WP_000359838.1;Name=WP_000359838.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462488.1;locus_tag=C9E94_RS05805;product=HlyD family secretion protein;protein_id=WP_000359838.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	80303	81499	.	-	.	ID=gene-C9E94_RS05810;Name=C9E94_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05810;old_locus_tag=C9E94_05965
NZ_PYJR01000046.1	Protein Homology	CDS	80303	81499	.	-	0	ID=cds-WP_135400868.1;Parent=gene-C9E94_RS05810;Dbxref=GenBank:WP_135400868.1;Name=WP_135400868.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462489.1;locus_tag=C9E94_RS05810;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_135400868.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	81730	83226	.	+	.	ID=gene-C9E94_RS05815;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=C9E94_RS05815;old_locus_tag=C9E94_05970
NZ_PYJR01000046.1	Protein Homology	CDS	81730	83226	.	+	0	ID=cds-WP_000902764.1;Parent=gene-C9E94_RS05815;Dbxref=GenBank:WP_000902764.1;Name=WP_000902764.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462490.1;locus_tag=C9E94_RS05815;product=inorganic phosphate transporter PitA;protein_id=WP_000902764.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	83366	83701	.	-	.	ID=gene-C9E94_RS05820;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=C9E94_RS05820;old_locus_tag=C9E94_05975
NZ_PYJR01000046.1	Protein Homology	CDS	83366	83701	.	-	0	ID=cds-WP_000626193.1;Parent=gene-C9E94_RS05820;Dbxref=GenBank:WP_000626193.1;Name=WP_000626193.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462491.1;locus_tag=C9E94_RS05820;product=universal stress protein UspB;protein_id=WP_000626193.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	84089	84523	.	+	.	ID=gene-C9E94_RS05825;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=C9E94_RS05825;old_locus_tag=C9E94_05980
NZ_PYJR01000046.1	Protein Homology	CDS	84089	84523	.	+	0	ID=cds-WP_000323565.1;Parent=gene-C9E94_RS05825;Dbxref=GenBank:WP_000323565.1;Name=WP_000323565.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462492.1;locus_tag=C9E94_RS05825;product=universal stress protein UspA;protein_id=WP_000323565.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	84849	86321	.	+	.	ID=gene-C9E94_RS05830;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=C9E94_RS05830;old_locus_tag=C9E94_05985
NZ_PYJR01000046.1	Protein Homology	CDS	84849	86321	.	+	0	ID=cds-WP_001098275.1;Parent=gene-C9E94_RS05830;Dbxref=GenBank:WP_001098275.1;Name=WP_001098275.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462493.1;locus_tag=C9E94_RS05830;product=dipeptide/tripeptide permease DtpB;protein_id=WP_001098275.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	86413	87171	.	-	.	ID=gene-C9E94_RS05835;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=C9E94_RS05835;old_locus_tag=C9E94_05990
NZ_PYJR01000046.1	Protein Homology	CDS	86413	87171	.	-	0	ID=cds-WP_135400869.1;Parent=gene-C9E94_RS05835;Dbxref=GenBank:WP_135400869.1;Name=WP_135400869.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462494.1;locus_tag=C9E94_RS05835;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_135400869.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	87178	89220	.	-	.	ID=gene-C9E94_RS05840;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=C9E94_RS05840;old_locus_tag=C9E94_05995
NZ_PYJR01000046.1	Protein Homology	CDS	87178	89220	.	-	0	ID=cds-WP_001528193.1;Parent=gene-C9E94_RS05840;Dbxref=GenBank:WP_001528193.1;Name=WP_001528193.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1;locus_tag=C9E94_RS05840;product=oligopeptidase A;protein_id=WP_001528193.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	89402	90673	.	-	.	ID=gene-C9E94_RS05845;Name=C9E94_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05845;old_locus_tag=C9E94_06000
NZ_PYJR01000046.1	Protein Homology	CDS	89402	90673	.	-	0	ID=cds-WP_135400870.1;Parent=gene-C9E94_RS05845;Dbxref=GenBank:WP_135400870.1;Name=WP_135400870.1;Ontology_term=GO:0016311,GO:0003993;gbkey=CDS;go_function=acid phosphatase activity|0003993||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462496.1;locus_tag=C9E94_RS05845;product=acid phosphatase;protein_id=WP_135400870.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	90884	91726	.	+	.	ID=gene-C9E94_RS05850;Name=C9E94_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05850;old_locus_tag=C9E94_06005
NZ_PYJR01000046.1	Protein Homology	CDS	90884	91726	.	+	0	ID=cds-WP_000954233.1;Parent=gene-C9E94_RS05850;Dbxref=GenBank:WP_000954233.1;Name=WP_000954233.1;Ontology_term=GO:0015976,GO:0070475,GO:0003723,GO:0008988,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=carbon utilization|0015976||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462497.1;locus_tag=C9E94_RS05850;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_000954233.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	91831	93183	.	+	.	ID=gene-C9E94_RS05855;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=C9E94_RS05855;old_locus_tag=C9E94_06010
NZ_PYJR01000046.1	Protein Homology	CDS	91831	93183	.	+	0	ID=cds-WP_135400871.1;Parent=gene-C9E94_RS05855;Dbxref=GenBank:WP_135400871.1;Name=WP_135400871.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=C9E94_RS05855;product=glutathione-disulfide reductase;protein_id=WP_135400871.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	pseudogene	93230	93355	.	-	.	ID=gene-C9E94_RS05860;Name=C9E94_RS05860;end_range=93355,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS05860;old_locus_tag=C9E94_06015;partial=true;pseudo=true
NZ_PYJR01000046.1	Protein Homology	CDS	93230	93355	.	-	0	ID=cds-C9E94_RS05860;Parent=gene-C9E94_RS05860;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=93355,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=C9E94_RS05860;partial=true;product=asparginase;pseudo=true;transl_table=11
NZ_PYJR01000046.1	RefSeq	pseudogene	93351	93434	.	-	.	ID=gene-C9E94_RS23870;Name=C9E94_RS23870;end_range=93434,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23870;old_locus_tag=C9E94_06020;partial=true;pseudo=true;start_range=.,93351
NZ_PYJR01000046.1	Protein Homology	CDS	93351	93434	.	-	0	ID=cds-C9E94_RS23870;Parent=gene-C9E94_RS23870;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=93434,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=C9E94_RS23870;partial=true;product=asparaginase domain-containing protein;pseudo=true;start_range=.,93351;transl_table=11
NZ_PYJR01000046.1	RefSeq	pseudogene	93580	93954	.	-	.	ID=gene-C9E94_RS05870;Name=fraE;gbkey=Gene;gene=fraE;gene_biotype=pseudogene;locus_tag=C9E94_RS05870;old_locus_tag=C9E94_06025;partial=true;pseudo=true;start_range=.,93580
NZ_PYJR01000046.1	Protein Homology	CDS	93580	93954	.	-	0	ID=cds-C9E94_RS05870;Parent=gene-C9E94_RS05870;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=fraE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=C9E94_RS05870;partial=true;product=fructose-asparagine asparaginase;pseudo=true;start_range=.,93580;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	94013	95332	.	-	.	ID=gene-C9E94_RS05875;Name=C9E94_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05875;old_locus_tag=C9E94_06030
NZ_PYJR01000046.1	Protein Homology	CDS	94013	95332	.	-	0	ID=cds-WP_000498935.1;Parent=gene-C9E94_RS05875;Dbxref=GenBank:WP_000498935.1;Name=WP_000498935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=C9E94_RS05875;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=WP_000498935.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	95386	96231	.	-	.	ID=gene-C9E94_RS05880;Name=fraD;gbkey=Gene;gene=fraD;gene_biotype=protein_coding;locus_tag=C9E94_RS05880;old_locus_tag=C9E94_06035
NZ_PYJR01000046.1	Protein Homology	CDS	95386	96231	.	-	0	ID=cds-WP_023250589.1;Parent=gene-C9E94_RS05880;Dbxref=GenBank:WP_023250589.1;Name=WP_023250589.1;gbkey=CDS;gene=fraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462501.1;locus_tag=C9E94_RS05880;product=fructose-aspartate kinase;protein_id=WP_023250589.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	96295	97272	.	-	.	ID=gene-C9E94_RS05885;Name=fraB;gbkey=Gene;gene=fraB;gene_biotype=protein_coding;locus_tag=C9E94_RS05885;old_locus_tag=C9E94_06040
NZ_PYJR01000046.1	Protein Homology	CDS	96295	97272	.	-	0	ID=cds-WP_012539922.1;Parent=gene-C9E94_RS05885;Dbxref=GenBank:WP_012539922.1;Name=WP_012539922.1;gbkey=CDS;gene=fraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462502.1;locus_tag=C9E94_RS05885;product=6-phosphofructose-aspartate deglycase;protein_id=WP_012539922.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	97448	98167	.	-	.	ID=gene-C9E94_RS05890;Name=C9E94_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05890;old_locus_tag=C9E94_06045
NZ_PYJR01000046.1	Protein Homology	CDS	97448	98167	.	-	0	ID=cds-WP_135400872.1;Parent=gene-C9E94_RS05890;Dbxref=GenBank:WP_135400872.1;Name=WP_135400872.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462503.1;locus_tag=C9E94_RS05890;product=GntR family transcriptional regulator;protein_id=WP_135400872.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	98494	100143	.	+	.	ID=gene-C9E94_RS05895;Name=C9E94_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05895;old_locus_tag=C9E94_06050
NZ_PYJR01000046.1	Protein Homology	CDS	98494	100143	.	+	0	ID=cds-WP_135400873.1;Parent=gene-C9E94_RS05895;Dbxref=GenBank:WP_135400873.1;Name=WP_135400873.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462504.1;locus_tag=C9E94_RS05895;product=alpha%2Calpha-trehalase;protein_id=WP_135400873.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	100156	101745	.	-	.	ID=gene-C9E94_RS05900;Name=C9E94_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05900;old_locus_tag=C9E94_06055
NZ_PYJR01000046.1	Protein Homology	CDS	100156	101745	.	-	0	ID=cds-WP_080212911.1;Parent=gene-C9E94_RS05900;Dbxref=GenBank:WP_080212911.1;Name=WP_080212911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=C9E94_RS05900;product=STY4199 family HEPN domain-containing protein;protein_id=WP_080212911.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	102026	102382	.	+	.	ID=gene-C9E94_RS05905;Name=C9E94_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05905;old_locus_tag=C9E94_06060
NZ_PYJR01000046.1	Protein Homology	CDS	102026	102382	.	+	0	ID=cds-WP_001120249.1;Parent=gene-C9E94_RS05905;Dbxref=GenBank:WP_001120249.1;Name=WP_001120249.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462506.1;locus_tag=C9E94_RS05905;product=glycoside hydrolase family protein;protein_id=WP_001120249.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	102388	102990	.	-	.	ID=gene-C9E94_RS05910;Name=C9E94_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05910;old_locus_tag=C9E94_06065
NZ_PYJR01000046.1	Protein Homology	CDS	102388	102990	.	-	0	ID=cds-WP_001196084.1;Parent=gene-C9E94_RS05910;Dbxref=GenBank:WP_001196084.1;Name=WP_001196084.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462507.1;locus_tag=C9E94_RS05910;product=helix-turn-helix transcriptional regulator;protein_id=WP_001196084.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	103621	104520	.	+	.	ID=gene-C9E94_RS05915;Name=C9E94_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05915;old_locus_tag=C9E94_06070
NZ_PYJR01000046.1	Protein Homology	CDS	103621	104520	.	+	0	ID=cds-WP_000358046.1;Parent=gene-C9E94_RS05915;Dbxref=GenBank:WP_000358046.1;Name=WP_000358046.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462508.1;locus_tag=C9E94_RS05915;product=LysR family transcriptional regulator;protein_id=WP_000358046.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	104593	105621	.	+	.	ID=gene-C9E94_RS05920;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=C9E94_RS05920;old_locus_tag=C9E94_06075
NZ_PYJR01000046.1	Protein Homology	CDS	104593	105621	.	+	0	ID=cds-WP_000191231.1;Parent=gene-C9E94_RS05920;Dbxref=GenBank:WP_000191231.1;Name=WP_000191231.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462509.1;locus_tag=C9E94_RS05920;product=inner membrane protein YhjD;protein_id=WP_000191231.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	105972	107294	.	+	.	ID=gene-C9E94_RS05925;Name=C9E94_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05925;old_locus_tag=C9E94_06080
NZ_PYJR01000046.1	Protein Homology	CDS	105972	107294	.	+	0	ID=cds-WP_001148981.1;Parent=gene-C9E94_RS05925;Dbxref=GenBank:WP_001148981.1;Name=WP_001148981.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462510.1;locus_tag=C9E94_RS05925;product=MFS transporter;protein_id=WP_001148981.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	107334	109394	.	-	.	ID=gene-C9E94_RS05930;Name=C9E94_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05930;old_locus_tag=C9E94_06085
NZ_PYJR01000046.1	Protein Homology	CDS	107334	109394	.	-	0	ID=cds-WP_135400874.1;Parent=gene-C9E94_RS05930;Dbxref=GenBank:WP_135400874.1;Name=WP_135400874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=C9E94_RS05930;product=AsmA family protein;protein_id=WP_135400874.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	109504	110271	.	-	.	ID=gene-C9E94_RS05935;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=C9E94_RS05935;old_locus_tag=C9E94_06090
NZ_PYJR01000046.1	Protein Homology	CDS	109504	110271	.	-	0	ID=cds-WP_000595625.1;Parent=gene-C9E94_RS05935;Dbxref=GenBank:WP_000595625.1;Name=WP_000595625.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462512.1;locus_tag=C9E94_RS05935;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_000595625.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	110500	111429	.	+	.	ID=gene-C9E94_RS05940;Name=C9E94_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05940;old_locus_tag=C9E94_06095
NZ_PYJR01000046.1	Protein Homology	CDS	110500	111429	.	+	0	ID=cds-WP_000037575.1;Parent=gene-C9E94_RS05940;Dbxref=GenBank:WP_000037575.1;Name=WP_000037575.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462513.1;locus_tag=C9E94_RS05940;product=sugar kinase;protein_id=WP_000037575.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	111483	112970	.	-	.	ID=gene-C9E94_RS05945;Name=C9E94_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05945;old_locus_tag=C9E94_06100
NZ_PYJR01000046.1	Protein Homology	CDS	111483	112970	.	-	0	ID=cds-WP_001163182.1;Parent=gene-C9E94_RS05945;Dbxref=GenBank:WP_001163182.1;Name=WP_001163182.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462514.1;locus_tag=C9E94_RS05945;product=M16 family metallopeptidase;protein_id=WP_001163182.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	113190	114476	.	-	.	ID=gene-C9E94_RS05950;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=C9E94_RS05950;old_locus_tag=C9E94_06105
NZ_PYJR01000046.1	Protein Homology	CDS	113190	114476	.	-	0	ID=cds-WP_000858228.1;Parent=gene-C9E94_RS05950;Dbxref=GenBank:WP_000858228.1;Name=WP_000858228.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462515.1;locus_tag=C9E94_RS05950;product=C4-dicarboxylate transporter DctC;protein_id=WP_000858228.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	114634	116640	.	-	.	ID=gene-C9E94_RS05955;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=C9E94_RS05955;old_locus_tag=C9E94_06110
NZ_PYJR01000046.1	Protein Homology	CDS	114634	116640	.	-	0	ID=cds-WP_001266357.1;Parent=gene-C9E94_RS05955;Dbxref=GenBank:WP_001266357.1;Name=WP_001266357.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266355.1;locus_tag=C9E94_RS05955;product=biofilm formation regulator HmsP;protein_id=WP_001266357.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	116814	120356	.	-	.	ID=gene-C9E94_RS05965;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=C9E94_RS05965;old_locus_tag=C9E94_06120
NZ_PYJR01000046.1	Protein Homology	CDS	116814	120356	.	-	0	ID=cds-WP_135400875.1;Parent=gene-C9E94_RS05965;Dbxref=GenBank:WP_135400875.1;Name=WP_135400875.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=C9E94_RS05965;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_135400875.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	120338	121447	.	-	.	ID=gene-C9E94_RS05970;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=C9E94_RS05970;old_locus_tag=C9E94_06125
NZ_PYJR01000046.1	Protein Homology	CDS	120338	121447	.	-	0	ID=cds-WP_080217359.1;Parent=gene-C9E94_RS05970;Dbxref=GenBank:WP_080217359.1;Name=WP_080217359.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462518.1;locus_tag=C9E94_RS05970;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_080217359.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	121451	123751	.	-	.	ID=gene-C9E94_RS05975;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=C9E94_RS05975;old_locus_tag=C9E94_06130
NZ_PYJR01000046.1	Protein Homology	CDS	121451	123751	.	-	0	ID=cds-WP_000823812.1;Parent=gene-C9E94_RS05975;Dbxref=GenBank:WP_000823812.1;Name=WP_000823812.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462519.1;locus_tag=C9E94_RS05975;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_000823812.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	123762	126386	.	-	.	ID=gene-C9E94_RS05980;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=C9E94_RS05980;old_locus_tag=C9E94_06135
NZ_PYJR01000046.1	Protein Homology	CDS	123762	126386	.	-	0	ID=cds-WP_135400876.1;Parent=gene-C9E94_RS05980;Dbxref=GenBank:WP_135400876.1;Name=WP_135400876.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462520.1;locus_tag=C9E94_RS05980;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_135400876.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	126383	127135	.	-	.	ID=gene-C9E94_RS05985;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=C9E94_RS05985;old_locus_tag=C9E94_06140
NZ_PYJR01000046.1	Protein Homology	CDS	126383	127135	.	-	0	ID=cds-WP_023255589.1;Parent=gene-C9E94_RS05985;Dbxref=GenBank:WP_023255589.1;Name=WP_023255589.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462521.1;locus_tag=C9E94_RS05985;product=cellulose biosynthesis protein BcsQ;protein_id=WP_023255589.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	127136	127339	.	-	.	ID=gene-C9E94_RS05990;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=C9E94_RS05990;old_locus_tag=C9E94_06145
NZ_PYJR01000046.1	Protein Homology	CDS	127136	127339	.	-	0	ID=cds-WP_000282616.1;Parent=gene-C9E94_RS05990;Dbxref=GenBank:WP_000282616.1;Name=WP_000282616.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462522.1;locus_tag=C9E94_RS05990;product=cellulose biosynthesis protein BcsR;protein_id=WP_000282616.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	127584	129155	.	+	.	ID=gene-C9E94_RS05995;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=C9E94_RS05995;old_locus_tag=C9E94_06150
NZ_PYJR01000046.1	Protein Homology	CDS	127584	129155	.	+	0	ID=cds-WP_001205771.1;Parent=gene-C9E94_RS05995;Dbxref=GenBank:WP_001205771.1;Name=WP_001205771.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462523.1;locus_tag=C9E94_RS05995;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WP_001205771.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	129152	129343	.	+	.	ID=gene-C9E94_RS06000;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=C9E94_RS06000;old_locus_tag=C9E94_06155
NZ_PYJR01000046.1	Protein Homology	CDS	129152	129343	.	+	0	ID=cds-WP_000988321.1;Parent=gene-C9E94_RS06000;Dbxref=GenBank:WP_000988321.1;Name=WP_000988321.1;Ontology_term=GO:0052324;gbkey=CDS;gene=bcsF;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462524.1;locus_tag=C9E94_RS06000;product=cellulose biosynthesis protein BcsF;protein_id=WP_000988321.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	129340	131019	.	+	.	ID=gene-C9E94_RS06005;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=C9E94_RS06005;old_locus_tag=C9E94_06160
NZ_PYJR01000046.1	Protein Homology	CDS	129340	131019	.	+	0	ID=cds-WP_000192022.1;Parent=gene-C9E94_RS06005;Dbxref=GenBank:WP_000192022.1;Name=WP_000192022.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462525.1;locus_tag=C9E94_RS06005;product=cellulose biosynthesis protein BcsG;protein_id=WP_000192022.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	131101	131208	.	-	.	ID=gene-C9E94_RS06010;Name=C9E94_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06010;old_locus_tag=C9E94_06165
NZ_PYJR01000046.1	Protein Homology	CDS	131101	131208	.	-	0	ID=cds-WP_001537650.1;Parent=gene-C9E94_RS06010;Dbxref=GenBank:WP_001537650.1;Name=WP_001537650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=C9E94_RS06010;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001537650.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	pseudogene	131502	131722	.	+	.	ID=gene-C9E94_RS06015;Name=C9E94_RS06015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS06015;old_locus_tag=C9E94_06175;partial=true;pseudo=true;start_range=.,131502
NZ_PYJR01000046.1	Protein Homology	CDS	131502	131722	.	+	0	ID=cds-C9E94_RS06015;Parent=gene-C9E94_RS06015;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133841.1;locus_tag=C9E94_RS06015;partial=true;product=PLP-dependent transferase;pseudo=true;start_range=.,131502;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	131840	133138	.	+	.	ID=gene-C9E94_RS06020;Name=C9E94_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06020;old_locus_tag=C9E94_06180
NZ_PYJR01000046.1	Protein Homology	CDS	131840	133138	.	+	0	ID=cds-WP_135400877.1;Parent=gene-C9E94_RS06020;Dbxref=GenBank:WP_135400877.1;Name=WP_135400877.1;Ontology_term=GO:0003333;gbkey=CDS;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462527.1;locus_tag=C9E94_RS06020;product=aromatic amino acid transport family protein;protein_id=WP_135400877.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	133239	134252	.	-	.	ID=gene-C9E94_RS06025;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=C9E94_RS06025;old_locus_tag=C9E94_06185
NZ_PYJR01000046.1	Protein Homology	CDS	133239	134252	.	-	0	ID=cds-WP_000103563.1;Parent=gene-C9E94_RS06025;Dbxref=GenBank:WP_000103563.1;Name=WP_000103563.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462528.1;locus_tag=C9E94_RS06025;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_000103563.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	134249	135232	.	-	.	ID=gene-C9E94_RS06030;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=C9E94_RS06030;old_locus_tag=C9E94_06190
NZ_PYJR01000046.1	Protein Homology	CDS	134249	135232	.	-	0	ID=cds-WP_001196509.1;Parent=gene-C9E94_RS06030;Dbxref=GenBank:WP_001196509.1;Name=WP_001196509.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462529.1;locus_tag=C9E94_RS06030;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_001196509.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	135243	136145	.	-	.	ID=gene-C9E94_RS06035;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=C9E94_RS06035;old_locus_tag=C9E94_06195
NZ_PYJR01000046.1	Protein Homology	CDS	135243	136145	.	-	0	ID=cds-WP_000084690.1;Parent=gene-C9E94_RS06035;Dbxref=GenBank:WP_000084690.1;Name=WP_000084690.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=C9E94_RS06035;product=dipeptide ABC transporter permease DppC;protein_id=WP_000084690.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	136155	137174	.	-	.	ID=gene-C9E94_RS06040;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=C9E94_RS06040;old_locus_tag=C9E94_06200
NZ_PYJR01000046.1	Protein Homology	CDS	136155	137174	.	-	0	ID=cds-WP_000938843.1;Parent=gene-C9E94_RS06040;Dbxref=GenBank:WP_000938843.1;Name=WP_000938843.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=C9E94_RS06040;product=dipeptide ABC transporter permease DppB;protein_id=WP_000938843.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	137331	138938	.	-	.	ID=gene-C9E94_RS06045;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=C9E94_RS06045;old_locus_tag=C9E94_06205
NZ_PYJR01000046.1	Protein Homology	CDS	137331	138938	.	-	0	ID=cds-WP_000028047.1;Parent=gene-C9E94_RS06045;Dbxref=GenBank:WP_000028047.1;Name=WP_000028047.1;Ontology_term=GO:0042938,GO:0071916,GO:0030288;gbkey=CDS;gene=dppA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=C9E94_RS06045;product=dipeptide ABC transporter periplasmic-binding protein DppA;protein_id=WP_000028047.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	139494	140819	.	-	.	ID=gene-C9E94_RS06050;Name=C9E94_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06050;old_locus_tag=C9E94_06210
NZ_PYJR01000046.1	Protein Homology	CDS	139494	140819	.	-	0	ID=cds-WP_001136082.1;Parent=gene-C9E94_RS06050;Dbxref=GenBank:WP_001136082.1;Name=WP_001136082.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=C9E94_RS06050;product=uracil-xanthine permease family protein;protein_id=WP_001136082.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	140877	142001	.	-	.	ID=gene-C9E94_RS06055;Name=C9E94_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06055;old_locus_tag=C9E94_06215
NZ_PYJR01000046.1	Protein Homology	CDS	140877	142001	.	-	0	ID=cds-WP_000940803.1;Parent=gene-C9E94_RS06055;Dbxref=GenBank:WP_000940803.1;Name=WP_000940803.1;Ontology_term=GO:0004062;gbkey=CDS;go_function=aryl sulfotransferase activity|0004062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462534.1;locus_tag=C9E94_RS06055;product=aryl-sulfate sulfotransferase;protein_id=WP_000940803.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	142151	143158	.	+	.	ID=gene-C9E94_RS06060;Name=C9E94_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06060;old_locus_tag=C9E94_06220
NZ_PYJR01000046.1	Protein Homology	CDS	142151	143158	.	+	0	ID=cds-WP_135400878.1;Parent=gene-C9E94_RS06060;Dbxref=GenBank:WP_135400878.1;Name=WP_135400878.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462535.1;locus_tag=C9E94_RS06060;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_135400878.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	143231	145198	.	-	.	ID=gene-C9E94_RS06065;Name=C9E94_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06065;old_locus_tag=C9E94_06225
NZ_PYJR01000046.1	Protein Homology	CDS	143231	145198	.	-	0	ID=cds-WP_135400879.1;Parent=gene-C9E94_RS06065;Dbxref=GenBank:WP_135400879.1;Name=WP_135400879.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000484537.1;locus_tag=C9E94_RS06065;product=AlbA family DNA-binding domain-containing protein;protein_id=WP_135400879.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	145538	145903	.	-	.	ID=gene-C9E94_RS06070;Name=C9E94_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06070;old_locus_tag=C9E94_06230
NZ_PYJR01000046.1	Protein Homology	CDS	145538	145903	.	-	0	ID=cds-WP_076727365.1;Parent=gene-C9E94_RS06070;Dbxref=GenBank:WP_076727365.1;Name=WP_076727365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001091330.1;locus_tag=C9E94_RS06070;product=phage integrase central domain-containing protein;protein_id=WP_076727365.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	146087	146220	.	-	.	ID=gene-C9E94_RS06075;Name=C9E94_RS06075;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E94_RS06075;old_locus_tag=C9E94_06235
NZ_PYJR01000046.1	cmsearch	ncRNA	146087	146220	.	-	.	ID=rna-C9E94_RS06075;Parent=gene-C9E94_RS06075;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS06075;product=RtT sRNA
NZ_PYJR01000046.1	cmsearch	exon	146087	146220	.	-	.	ID=exon-C9E94_RS06075-1;Parent=rna-C9E94_RS06075;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS06075;product=RtT sRNA
NZ_PYJR01000046.1	RefSeq	gene	146256	146332	.	-	.	ID=gene-C9E94_RS06080;Name=C9E94_RS06080;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS06080;old_locus_tag=C9E94_06240
NZ_PYJR01000046.1	tRNAscan-SE	tRNA	146256	146332	.	-	.	ID=rna-C9E94_RS06080;Parent=gene-C9E94_RS06080;anticodon=(pos:complement(146296..146298));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS06080;product=tRNA-Pro
NZ_PYJR01000046.1	tRNAscan-SE	exon	146256	146332	.	-	.	ID=exon-C9E94_RS06080-1;Parent=rna-C9E94_RS06080;anticodon=(pos:complement(146296..146298));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS06080;product=tRNA-Pro
NZ_PYJR01000046.1	RefSeq	gene	146423	148114	.	-	.	ID=gene-C9E94_RS06085;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=C9E94_RS06085;old_locus_tag=C9E94_06245
NZ_PYJR01000046.1	Protein Homology	CDS	146423	148114	.	-	0	ID=cds-WP_001269257.1;Parent=gene-C9E94_RS06085;Dbxref=GenBank:WP_001269257.1;Name=WP_001269257.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462536.1;locus_tag=C9E94_RS06085;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_001269257.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	148332	148859	.	-	.	ID=gene-C9E94_RS06090;Name=lpfE;gbkey=Gene;gene=lpfE;gene_biotype=protein_coding;locus_tag=C9E94_RS06090;old_locus_tag=C9E94_06250
NZ_PYJR01000046.1	Protein Homology	CDS	148332	148859	.	-	0	ID=cds-WP_000792957.1;Parent=gene-C9E94_RS06090;Dbxref=GenBank:WP_000792957.1;Name=WP_000792957.1;gbkey=CDS;gene=lpfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462537.1;locus_tag=C9E94_RS06090;product=long polar fimbrial protein LpfE;protein_id=WP_000792957.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	148865	149944	.	-	.	ID=gene-C9E94_RS06095;Name=lpfD;gbkey=Gene;gene=lpfD;gene_biotype=protein_coding;locus_tag=C9E94_RS06095;old_locus_tag=C9E94_06255
NZ_PYJR01000046.1	Protein Homology	CDS	148865	149944	.	-	0	ID=cds-WP_000914254.1;Parent=gene-C9E94_RS06095;Dbxref=GenBank:WP_000914254.1;Name=WP_000914254.1;gbkey=CDS;gene=lpfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462538.1;locus_tag=C9E94_RS06095;product=long polar fimbrial protein LpfD;protein_id=WP_000914254.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	149962	152490	.	-	.	ID=gene-C9E94_RS06100;Name=lpfC;gbkey=Gene;gene=lpfC;gene_biotype=protein_coding;locus_tag=C9E94_RS06100;old_locus_tag=C9E94_06260
NZ_PYJR01000046.1	Protein Homology	CDS	149962	152490	.	-	0	ID=cds-WP_111742201.1;Parent=gene-C9E94_RS06100;Dbxref=GenBank:WP_111742201.1;Name=WP_111742201.1;gbkey=CDS;gene=lpfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462539.1;locus_tag=C9E94_RS06100;product=outer membrane usher protein LpfC;protein_id=WP_111742201.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	152513	153211	.	-	.	ID=gene-C9E94_RS06105;Name=lpfB;gbkey=Gene;gene=lpfB;gene_biotype=protein_coding;locus_tag=C9E94_RS06105;old_locus_tag=C9E94_06265
NZ_PYJR01000046.1	Protein Homology	CDS	152513	153211	.	-	0	ID=cds-WP_001082123.1;Parent=gene-C9E94_RS06105;Dbxref=GenBank:WP_001082123.1;Name=WP_001082123.1;gbkey=CDS;gene=lpfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462540.1;locus_tag=C9E94_RS06105;product=long polar fimbrial chaperone LpfB;protein_id=WP_001082123.1;transl_table=11
NZ_PYJR01000046.1	RefSeq	gene	153296	153820	.	-	.	ID=gene-C9E94_RS06110;Name=lpfA;gbkey=Gene;gene=lpfA;gene_biotype=protein_coding;locus_tag=C9E94_RS06110;old_locus_tag=C9E94_06270
NZ_PYJR01000046.1	Protein Homology	CDS	153296	153820	.	-	0	ID=cds-WP_001519917.1;Parent=gene-C9E94_RS06110;Dbxref=GenBank:WP_001519917.1;Name=WP_001519917.1;gbkey=CDS;gene=lpfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519917.1;locus_tag=C9E94_RS06110;product=long polar fimbria major subunit LpfA;protein_id=WP_001519917.1;transl_table=11
##sequence-region NZ_PYJR01000061.1 1 42246
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000061.1	RefSeq	region	1	42246	.	+	.	ID=NZ_PYJR01000061.1:1..42246;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000061.1	RefSeq	gene	38	343	.	-	.	ID=gene-C9E94_RS07900;Name=C9E94_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07900;old_locus_tag=C9E94_08080
NZ_PYJR01000061.1	Protein Homology	CDS	38	343	.	-	0	ID=cds-WP_072276022.1;Parent=gene-C9E94_RS07900;Dbxref=GenBank:WP_072276022.1;Name=WP_072276022.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632802.1;locus_tag=C9E94_RS07900;product=SymE family type I addiction module toxin;protein_id=WP_072276022.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	435	593	.	+	.	ID=gene-C9E94_RS23885;Name=C9E94_RS23885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23885
NZ_PYJR01000061.1	Protein Homology	CDS	435	593	.	+	0	ID=cds-WP_024151530.1;Parent=gene-C9E94_RS23885;Dbxref=GenBank:WP_024151530.1;Name=WP_024151530.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.6;locus_tag=C9E94_RS23885;product=transposase;protein_id=WP_024151530.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	pseudogene	527	1097	.	+	.	ID=gene-C9E94_RS07905;Name=C9E94_RS07905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS07905;old_locus_tag=C9E94_08085;partial=true;pseudo=true;start_range=.,527
NZ_PYJR01000061.1	Protein Homology	CDS	527	1097	.	+	0	ID=cds-C9E94_RS07905;Parent=gene-C9E94_RS07905;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365374.1;locus_tag=C9E94_RS07905;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,527;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	1864	2361	.	+	.	ID=gene-C9E94_RS07910;Name=C9E94_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07910;old_locus_tag=C9E94_08090
NZ_PYJR01000061.1	Protein Homology	CDS	1864	2361	.	+	0	ID=cds-WP_061378778.1;Parent=gene-C9E94_RS07910;Dbxref=GenBank:WP_061378778.1;Name=WP_061378778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749863.1;locus_tag=C9E94_RS07910;product=pilus assembly protein;protein_id=WP_061378778.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	2445	3182	.	+	.	ID=gene-C9E94_RS07915;Name=safB;gbkey=Gene;gene=safB;gene_biotype=protein_coding;locus_tag=C9E94_RS07915;old_locus_tag=C9E94_08095
NZ_PYJR01000061.1	Protein Homology	CDS	2445	3182	.	+	0	ID=cds-WP_024135809.1;Parent=gene-C9E94_RS07915;Dbxref=GenBank:WP_024135809.1;Name=WP_024135809.1;gbkey=CDS;gene=safB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465813.1;locus_tag=C9E94_RS07915;product=pili assembly chaperone SafB;protein_id=WP_024135809.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	3206	5716	.	+	.	ID=gene-C9E94_RS07920;Name=C9E94_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07920;old_locus_tag=C9E94_08100
NZ_PYJR01000061.1	Protein Homology	CDS	3206	5716	.	+	0	ID=cds-WP_135400926.1;Parent=gene-C9E94_RS07920;Dbxref=GenBank:WP_135400926.1;Name=WP_135400926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459299.1;locus_tag=C9E94_RS07920;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_135400926.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	5738	6208	.	+	.	ID=gene-C9E94_RS07925;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=C9E94_RS07925;old_locus_tag=C9E94_08105
NZ_PYJR01000061.1	Protein Homology	CDS	5738	6208	.	+	0	ID=cds-WP_000266937.1;Parent=gene-C9E94_RS07925;Dbxref=GenBank:WP_000266937.1;Name=WP_000266937.1;gbkey=CDS;gene=afaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459300.1;locus_tag=C9E94_RS07925;product=AfaD family invasin;protein_id=WP_000266937.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	6616	7437	.	+	.	ID=gene-C9E94_RS07930;Name=C9E94_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07930;old_locus_tag=C9E94_08110
NZ_PYJR01000061.1	Protein Homology	CDS	6616	7437	.	+	0	ID=cds-WP_000119375.1;Parent=gene-C9E94_RS07930;Dbxref=GenBank:WP_000119375.1;Name=WP_000119375.1;Ontology_term=GO:0005975,GO:0016787,GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459301.1;locus_tag=C9E94_RS07930;product=polysaccharide deacetylase family protein;protein_id=WP_000119375.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	pseudogene	7520	7757	.	+	.	ID=gene-C9E94_RS07935;Name=C9E94_RS07935;end_range=7757,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS07935;old_locus_tag=C9E94_08115;partial=true;pseudo=true
NZ_PYJR01000061.1	Protein Homology	CDS	7520	7757	.	+	0	ID=cds-C9E94_RS07935;Parent=gene-C9E94_RS07935;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=7757,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602066.1;locus_tag=C9E94_RS07935;partial=true;product=PerC family transcriptional regulator;pseudo=true;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	8254	9201	.	+	.	ID=gene-C9E94_RS07940;Name=C9E94_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07940;old_locus_tag=C9E94_08120
NZ_PYJR01000061.1	Protein Homology	CDS	8254	9201	.	+	0	ID=cds-WP_000970302.1;Parent=gene-C9E94_RS07940;Dbxref=GenBank:WP_000970302.1;Name=WP_000970302.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459302.1;locus_tag=C9E94_RS07940;product=LysR family transcriptional regulator;protein_id=WP_000970302.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	pseudogene	9321	9440	.	+	.	ID=gene-C9E94_RS07945;Name=C9E94_RS07945;end_range=9440,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS07945;old_locus_tag=C9E94_08125;partial=true;pseudo=true
NZ_PYJR01000061.1	Protein Homology	CDS	9321	9440	.	+	0	ID=cds-C9E94_RS07945;Parent=gene-C9E94_RS07945;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=9440,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459303.1;locus_tag=C9E94_RS07945;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYJR01000061.1	RefSeq	pseudogene	9521	9682	.	+	.	ID=gene-C9E94_RS07950;Name=C9E94_RS07950;end_range=9682,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS07950;old_locus_tag=C9E94_08130;partial=true;pseudo=true
NZ_PYJR01000061.1	Protein Homology	CDS	9521	9682	.	+	0	ID=cds-C9E94_RS07950;Parent=gene-C9E94_RS07950;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=9682,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611456.1;locus_tag=C9E94_RS07950;partial=true;product=transposase;pseudo=true;transl_table=11
NZ_PYJR01000061.1	RefSeq	pseudogene	9747	10343	.	-	.	ID=gene-C9E94_RS07955;Name=C9E94_RS07955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS07955;old_locus_tag=C9E94_08135;pseudo=true
NZ_PYJR01000061.1	Protein Homology	CDS	9747	10343	.	-	0	ID=cds-C9E94_RS07955;Parent=gene-C9E94_RS07955;Note=internal stop;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF013828.6;locus_tag=C9E94_RS07955;product=ATP-binding protein;pseudo=true;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	11262	11972	.	+	.	ID=gene-C9E94_RS07965;Name=tcfA;gbkey=Gene;gene=tcfA;gene_biotype=protein_coding;locus_tag=C9E94_RS07965;old_locus_tag=C9E94_08145
NZ_PYJR01000061.1	Protein Homology	CDS	11262	11972	.	+	0	ID=cds-WP_001009507.1;Parent=gene-C9E94_RS07965;Dbxref=GenBank:WP_001009507.1;Name=WP_001009507.1;gbkey=CDS;gene=tcfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001009503.1;locus_tag=C9E94_RS07965;product=fimbrial chaperone TcfA;protein_id=WP_001009507.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	12023	12598	.	+	.	ID=gene-C9E94_RS07970;Name=tcfB;gbkey=Gene;gene=tcfB;gene_biotype=protein_coding;locus_tag=C9E94_RS07970;old_locus_tag=C9E94_08150
NZ_PYJR01000061.1	Protein Homology	CDS	12023	12598	.	+	0	ID=cds-WP_000287810.1;Parent=gene-C9E94_RS07970;Dbxref=GenBank:WP_000287810.1;Name=WP_000287810.1;gbkey=CDS;gene=tcfB;inference=COORDINATES: protein motif:HMM:NF011837.0;locus_tag=C9E94_RS07970;product=fimbrial protein TcfB;protein_id=WP_000287810.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	12707	15394	.	+	.	ID=gene-C9E94_RS07975;Name=tcfC;gbkey=Gene;gene=tcfC;gene_biotype=protein_coding;locus_tag=C9E94_RS07975;old_locus_tag=C9E94_08155
NZ_PYJR01000061.1	Protein Homology	CDS	12707	15394	.	+	0	ID=cds-WP_057525107.1;Parent=gene-C9E94_RS07975;Dbxref=GenBank:WP_057525107.1;Name=WP_057525107.1;gbkey=CDS;gene=tcfC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000092509.1;locus_tag=C9E94_RS07975;product=fimbrial outer membrane usher protein TcfC;protein_id=WP_057525107.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	15417	16475	.	+	.	ID=gene-C9E94_RS07980;Name=C9E94_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07980;old_locus_tag=C9E94_08160
NZ_PYJR01000061.1	Protein Homology	CDS	15417	16475	.	+	0	ID=cds-WP_045342877.1;Parent=gene-C9E94_RS07980;Dbxref=GenBank:WP_045342877.1;Name=WP_045342877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000791808.1;locus_tag=C9E94_RS07980;product=CfaE/CblD family pilus tip adhesin;protein_id=WP_045342877.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	16608	17063	.	+	.	ID=gene-C9E94_RS07985;Name=tinR;gbkey=Gene;gene=tinR;gene_biotype=protein_coding;locus_tag=C9E94_RS07985;old_locus_tag=C9E94_08165
NZ_PYJR01000061.1	Protein Homology	CDS	16608	17063	.	+	0	ID=cds-WP_000141547.1;Parent=gene-C9E94_RS07985;Dbxref=GenBank:WP_000141547.1;Name=WP_000141547.1;gbkey=CDS;gene=tinR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219490.1;locus_tag=C9E94_RS07985;product=Lrp/AsnC family transcriptional regulator TinR;protein_id=WP_000141547.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	17203	17820	.	+	.	ID=gene-C9E94_RS07990;Name=tioA;gbkey=Gene;gene=tioA;gene_biotype=protein_coding;locus_tag=C9E94_RS07990;old_locus_tag=C9E94_08170
NZ_PYJR01000061.1	Protein Homology	CDS	17203	17820	.	+	0	ID=cds-WP_000241747.1;Parent=gene-C9E94_RS07990;Dbxref=GenBank:WP_000241747.1;Name=WP_000241747.1;gbkey=CDS;gene=tioA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241754.1;locus_tag=C9E94_RS07990;product=protein TioA;protein_id=WP_000241747.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	pseudogene	18422	18534	.	-	.	ID=gene-C9E94_RS23445;Name=C9E94_RS23445;end_range=18534,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23445;partial=true;pseudo=true;start_range=.,18422
NZ_PYJR01000061.1	Protein Homology	CDS	18422	18534	.	-	0	ID=cds-C9E94_RS23445;Parent=gene-C9E94_RS23445;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=18534,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=C9E94_RS23445;partial=true;product=hypothetical protein;pseudo=true;start_range=.,18422;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	18591	18779	.	+	.	ID=gene-C9E94_RS08000;Name=C9E94_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08000;old_locus_tag=C9E94_08180
NZ_PYJR01000061.1	Protein Homology	CDS	18591	18779	.	+	0	ID=cds-WP_031603649.1;Parent=gene-C9E94_RS08000;Dbxref=GenBank:WP_031603649.1;Name=WP_031603649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543323.1;locus_tag=C9E94_RS08000;product=hypothetical protein;protein_id=WP_031603649.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	18783	19502	.	-	.	ID=gene-C9E94_RS08005;Name=pagN;gbkey=Gene;gene=pagN;gene_biotype=protein_coding;locus_tag=C9E94_RS08005;old_locus_tag=C9E94_08185
NZ_PYJR01000061.1	Protein Homology	CDS	18783	19502	.	-	0	ID=cds-WP_000787605.1;Parent=gene-C9E94_RS08005;Dbxref=GenBank:WP_000787605.1;Name=WP_000787605.1;gbkey=CDS;gene=pagN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459304.1;locus_tag=C9E94_RS08005;product=adhesin/invasin protein PagN;protein_id=WP_000787605.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	19833	20240	.	-	.	ID=gene-C9E94_RS08010;Name=C9E94_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08010;old_locus_tag=C9E94_08190
NZ_PYJR01000061.1	Protein Homology	CDS	19833	20240	.	-	0	ID=cds-WP_000788200.1;Parent=gene-C9E94_RS08010;Dbxref=GenBank:WP_000788200.1;Name=WP_000788200.1;Ontology_term=GO:0006457,GO:0044183,GO:0051082;gbkey=CDS;go_function=protein folding chaperone|0044183||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459305.1;locus_tag=C9E94_RS08010;product=Spy/CpxP family protein refolding chaperone;protein_id=WP_000788200.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	20550	21317	.	-	.	ID=gene-C9E94_RS08015;Name=C9E94_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08015;old_locus_tag=C9E94_08195
NZ_PYJR01000061.1	Protein Homology	CDS	20550	21317	.	-	0	ID=cds-WP_000015789.1;Parent=gene-C9E94_RS08015;Dbxref=GenBank:WP_000015789.1;Name=WP_000015789.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459306.1;locus_tag=C9E94_RS08015;product=amidohydrolase;protein_id=WP_000015789.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	21426	23870	.	-	.	ID=gene-C9E94_RS08020;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=C9E94_RS08020;old_locus_tag=C9E94_08200
NZ_PYJR01000061.1	Protein Homology	CDS	21426	23870	.	-	0	ID=cds-WP_000973041.1;Parent=gene-C9E94_RS08020;Dbxref=GenBank:WP_000973041.1;Name=WP_000973041.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=C9E94_RS08020;product=acyl-CoA dehydrogenase FadE;protein_id=WP_000973041.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	24110	24688	.	+	.	ID=gene-C9E94_RS08025;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=C9E94_RS08025;old_locus_tag=C9E94_08205
NZ_PYJR01000061.1	Protein Homology	CDS	24110	24688	.	+	0	ID=cds-WP_000284051.1;Parent=gene-C9E94_RS08025;Dbxref=GenBank:WP_000284051.1;Name=WP_000284051.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459308.1;locus_tag=C9E94_RS08025;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_000284051.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	24901	25668	.	+	.	ID=gene-C9E94_RS08030;Name=C9E94_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08030;old_locus_tag=C9E94_08210
NZ_PYJR01000061.1	Protein Homology	CDS	24901	25668	.	+	0	ID=cds-WP_000333387.1;Parent=gene-C9E94_RS08030;Dbxref=GenBank:WP_000333387.1;Name=WP_000333387.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459309.1;locus_tag=C9E94_RS08030;product=class II glutamine amidotransferase;protein_id=WP_000333387.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	25639	26379	.	-	.	ID=gene-C9E94_RS08035;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=C9E94_RS08035;old_locus_tag=C9E94_08215
NZ_PYJR01000061.1	Protein Homology	CDS	25639	26379	.	-	0	ID=cds-WP_001225658.1;Parent=gene-C9E94_RS08035;Dbxref=GenBank:WP_001225658.1;Name=WP_001225658.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459310.1;locus_tag=C9E94_RS08035;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_001225658.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	26629	27684	.	+	.	ID=gene-C9E94_RS08040;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=C9E94_RS08040;old_locus_tag=C9E94_08220
NZ_PYJR01000061.1	Protein Homology	CDS	26629	27684	.	+	0	ID=cds-WP_001226205.1;Parent=gene-C9E94_RS08040;Dbxref=GenBank:WP_001226205.1;Name=WP_001226205.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459311.1;locus_tag=C9E94_RS08040;product=DNA polymerase IV;protein_id=WP_001226205.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	27903	29042	.	+	.	ID=gene-C9E94_RS08045;Name=C9E94_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08045;old_locus_tag=C9E94_08225
NZ_PYJR01000061.1	Protein Homology	CDS	27903	29042	.	+	0	ID=cds-WP_135400927.1;Parent=gene-C9E94_RS08045;Dbxref=GenBank:WP_135400927.1;Name=WP_135400927.1;Ontology_term=GO:0006415;gbkey=CDS;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006895405.1;locus_tag=C9E94_RS08045;product=RNA ligase RtcB family protein;protein_id=WP_135400927.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	29039	29653	.	+	.	ID=gene-C9E94_RS08050;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=protein_coding;locus_tag=C9E94_RS08050;old_locus_tag=C9E94_08230
NZ_PYJR01000061.1	Protein Homology	CDS	29039	29653	.	+	0	ID=cds-WP_000602086.1;Parent=gene-C9E94_RS08050;Dbxref=GenBank:WP_000602086.1;Name=WP_000602086.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459312.1;locus_tag=C9E94_RS08050;product=peptide chain release factor H;protein_id=WP_000602086.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	29808	31265	.	-	.	ID=gene-C9E94_RS08055;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=C9E94_RS08055;old_locus_tag=C9E94_08235
NZ_PYJR01000061.1	Protein Homology	CDS	29808	31265	.	-	0	ID=cds-WP_052932660.1;Parent=gene-C9E94_RS08055;Dbxref=GenBank:WP_052932660.1;Name=WP_052932660.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=C9E94_RS08055;product=cytosol nonspecific dipeptidase;protein_id=WP_052932660.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	31514	31972	.	+	.	ID=gene-C9E94_RS08060;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=C9E94_RS08060;old_locus_tag=C9E94_08240
NZ_PYJR01000061.1	Protein Homology	CDS	31514	31972	.	+	0	ID=cds-WP_001292018.1;Parent=gene-C9E94_RS08060;Dbxref=GenBank:WP_001292018.1;Name=WP_001292018.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459314.1;locus_tag=C9E94_RS08060;product=xanthine phosphoribosyltransferase;protein_id=WP_001292018.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	32061	33305	.	+	.	ID=gene-C9E94_RS08065;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=C9E94_RS08065;old_locus_tag=C9E94_08245
NZ_PYJR01000061.1	Protein Homology	CDS	32061	33305	.	+	0	ID=cds-WP_000189588.1;Parent=gene-C9E94_RS08065;Dbxref=GenBank:WP_000189588.1;Name=WP_000189588.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459315.1;locus_tag=C9E94_RS08065;product=esterase FrsA;protein_id=WP_000189588.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	33363	33764	.	+	.	ID=gene-C9E94_RS08070;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=C9E94_RS08070;old_locus_tag=C9E94_08250
NZ_PYJR01000061.1	Protein Homology	CDS	33363	33764	.	+	0	ID=cds-WP_000174696.1;Parent=gene-C9E94_RS08070;Dbxref=GenBank:WP_000174696.1;Name=WP_000174696.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459316.1;locus_tag=C9E94_RS08070;product=sigma factor-binding protein Crl;protein_id=WP_000174696.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	33815	34867	.	-	.	ID=gene-C9E94_RS08075;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=C9E94_RS08075;old_locus_tag=C9E94_08255
NZ_PYJR01000061.1	Protein Homology	CDS	33815	34867	.	-	0	ID=cds-WP_135400928.1;Parent=gene-C9E94_RS08075;Dbxref=GenBank:WP_135400928.1;Name=WP_135400928.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459317.1;locus_tag=C9E94_RS08075;product=phosphoporin PhoE;protein_id=WP_135400928.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	35150	36253	.	+	.	ID=gene-C9E94_RS08080;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=C9E94_RS08080;old_locus_tag=C9E94_08260
NZ_PYJR01000061.1	Protein Homology	CDS	35150	36253	.	+	0	ID=cds-WP_001285275.1;Parent=gene-C9E94_RS08080;Dbxref=GenBank:WP_001285275.1;Name=WP_001285275.1;Ontology_term=GO:0055129,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459318.1;locus_tag=C9E94_RS08080;product=glutamate 5-kinase;protein_id=WP_001285275.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	36265	37515	.	+	.	ID=gene-C9E94_RS08085;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=C9E94_RS08085;old_locus_tag=C9E94_08265
NZ_PYJR01000061.1	Protein Homology	CDS	36265	37515	.	+	0	ID=cds-WP_023210084.1;Parent=gene-C9E94_RS08085;Dbxref=GenBank:WP_023210084.1;Name=WP_023210084.1;Ontology_term=GO:0055129,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459319.1;locus_tag=C9E94_RS08085;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_023210084.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	37631	37706	.	+	.	ID=gene-C9E94_RS08090;Name=C9E94_RS08090;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS08090;old_locus_tag=C9E94_08270
NZ_PYJR01000061.1	tRNAscan-SE	tRNA	37631	37706	.	+	.	ID=rna-C9E94_RS08090;Parent=gene-C9E94_RS08090;anticodon=(pos:37664..37666);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS08090;product=tRNA-Thr
NZ_PYJR01000061.1	tRNAscan-SE	exon	37631	37706	.	+	.	ID=exon-C9E94_RS08090-1;Parent=rna-C9E94_RS08090;anticodon=(pos:37664..37666);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS08090;product=tRNA-Thr
NZ_PYJR01000061.1	RefSeq	pseudogene	37720	38882	.	-	.	ID=gene-C9E94_RS08095;Name=C9E94_RS08095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS08095;old_locus_tag=C9E94_08275;pseudo=true
NZ_PYJR01000061.1	Protein Homology	CDS	37720	38882	.	-	0	ID=cds-C9E94_RS08095;Parent=gene-C9E94_RS08095;Note=frameshifted;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706266.1;locus_tag=C9E94_RS08095;product=site-specific integrase;pseudo=true;transl_table=11
NZ_PYJR01000061.1	RefSeq	pseudogene	39044	39109	.	-	.	ID=gene-C9E94_RS23795;Name=C9E94_RS23795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23795;partial=true;pseudo=true;start_range=.,39044
NZ_PYJR01000061.1	Protein Homology	CDS	39044	39109	.	-	0	ID=cds-C9E94_RS23795;Parent=gene-C9E94_RS23795;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024139.6;locus_tag=C9E94_RS23795;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,39044;transl_table=11
NZ_PYJR01000061.1	RefSeq	gene	39322	39543	.	-	.	ID=gene-C9E94_RS08105;Name=C9E94_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08105;old_locus_tag=C9E94_08285
NZ_PYJR01000061.1	Protein Homology	CDS	39322	39543	.	-	0	ID=cds-WP_254893256.1;Parent=gene-C9E94_RS08105;Dbxref=GenBank:WP_254893256.1;Name=WP_254893256.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016343.6;locus_tag=C9E94_RS08105;product=DUF551 domain-containing protein;protein_id=WP_254893256.1;transl_table=11
NZ_PYJR01000061.1	RefSeq	pseudogene	39532	39866	.	-	.	ID=gene-C9E94_RS08110;Name=C9E94_RS08110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS08110;old_locus_tag=C9E94_08290;partial=true;pseudo=true;start_range=.,39532
NZ_PYJR01000061.1	Protein Homology	CDS	39532	39866	.	-	0	ID=cds-C9E94_RS08110;Parent=gene-C9E94_RS08110;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000951334.1;locus_tag=C9E94_RS08110;partial=true;product=hypothetical protein;pseudo=true;start_range=.,39532;transl_table=11
NZ_PYJR01000061.1	RefSeq	pseudogene	39866	40469	.	-	.	ID=gene-C9E94_RS08115;Name=C9E94_RS08115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS08115;old_locus_tag=C9E94_08295;pseudo=true
NZ_PYJR01000061.1	Protein Homology	CDS	39866	40469	.	-	0	ID=cds-C9E94_RS08115;Parent=gene-C9E94_RS08115;Note=frameshifted%3B internal stop;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000031374.1;locus_tag=C9E94_RS08115;product=ERF family protein;pseudo=true;transl_table=11
NZ_PYJR01000061.1	RefSeq	pseudogene	40856	41953	.	-	.	ID=gene-C9E94_RS08125;Name=C9E94_RS08125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS08125;old_locus_tag=C9E94_08305;pseudo=true
NZ_PYJR01000061.1	Protein Homology	CDS	40856	41953	.	-	0	ID=cds-C9E94_RS08125;Parent=gene-C9E94_RS08125;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611505.1;locus_tag=C9E94_RS08125;product=IS3 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_PYJR01000098.1 1 40708
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000098.1	RefSeq	region	1	40708	.	+	.	ID=NZ_PYJR01000098.1:1..40708;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000098.1	RefSeq	gene	186	824	.	+	.	ID=gene-C9E94_RS14050;Name=C9E94_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14050;old_locus_tag=C9E94_14375
NZ_PYJR01000098.1	Protein Homology	CDS	186	824	.	+	0	ID=cds-WP_023233292.1;Parent=gene-C9E94_RS14050;Dbxref=GenBank:WP_023233292.1;Name=WP_023233292.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03748.1;locus_tag=C9E94_RS14050;product=putative type IV pilus protein;protein_id=WP_023233292.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	848	1522	.	+	.	ID=gene-C9E94_RS14055;Name=C9E94_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14055;old_locus_tag=C9E94_14380
NZ_PYJR01000098.1	Protein Homology	CDS	848	1522	.	+	0	ID=cds-WP_135401093.1;Parent=gene-C9E94_RS14055;Dbxref=GenBank:WP_135401093.1;Name=WP_135401093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001561306.1;locus_tag=C9E94_RS14055;product=TIGR03759 family integrating conjugative element protein;protein_id=WP_135401093.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	1501	2019	.	+	.	ID=gene-C9E94_RS14060;Name=C9E94_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14060;old_locus_tag=C9E94_14385
NZ_PYJR01000098.1	Protein Homology	CDS	1501	2019	.	+	0	ID=cds-WP_135401094.1;Parent=gene-C9E94_RS14060;Dbxref=GenBank:WP_135401094.1;Name=WP_135401094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654414.1;locus_tag=C9E94_RS14060;product=transglycosylase SLT domain-containing protein;protein_id=WP_135401094.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	pseudogene	2016	3960	.	+	.	ID=gene-C9E94_RS14065;Name=traD;gbkey=Gene;gene=traD;gene_biotype=pseudogene;locus_tag=C9E94_RS14065;old_locus_tag=C9E94_14390;pseudo=true
NZ_PYJR01000098.1	Protein Homology	CDS	2016	3960	.	+	0	ID=cds-C9E94_RS14065;Parent=gene-C9E94_RS14065;Note=frameshifted%3B internal stop;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728513.1;locus_tag=C9E94_RS14065;product=type IV conjugative transfer system coupling protein TraD;pseudo=true;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	3957	4589	.	+	.	ID=gene-C9E94_RS14070;Name=C9E94_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14070;old_locus_tag=C9E94_14395
NZ_PYJR01000098.1	Protein Homology	CDS	3957	4589	.	+	0	ID=cds-WP_135401095.1;Parent=gene-C9E94_RS14070;Dbxref=GenBank:WP_135401095.1;Name=WP_135401095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012737290.1;locus_tag=C9E94_RS14070;product=DUF4400 domain-containing protein;protein_id=WP_135401095.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	4592	5383	.	-	.	ID=gene-C9E94_RS14075;Name=C9E94_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14075;old_locus_tag=C9E94_14400
NZ_PYJR01000098.1	Protein Homology	CDS	4592	5383	.	-	0	ID=cds-WP_024133357.1;Parent=gene-C9E94_RS14075;Dbxref=GenBank:WP_024133357.1;Name=WP_024133357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014593551.1;locus_tag=C9E94_RS14075;product=DUF6602 domain-containing protein;protein_id=WP_024133357.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	5539	5853	.	+	.	ID=gene-C9E94_RS14080;Name=C9E94_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14080;old_locus_tag=C9E94_14405
NZ_PYJR01000098.1	Protein Homology	CDS	5539	5853	.	+	0	ID=cds-WP_000966040.1;Parent=gene-C9E94_RS14080;Dbxref=GenBank:WP_000966040.1;Name=WP_000966040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000966040.1;locus_tag=C9E94_RS14080;product=RAQPRD family integrative conjugative element protein;protein_id=WP_000966040.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	5846	6130	.	+	.	ID=gene-C9E94_RS14085;Name=C9E94_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14085;old_locus_tag=C9E94_14410
NZ_PYJR01000098.1	GeneMarkS-2+	CDS	5846	6130	.	+	0	ID=cds-WP_255123294.1;Parent=gene-C9E94_RS14085;Dbxref=GenBank:WP_255123294.1;Name=WP_255123294.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS14085;product=hypothetical protein;protein_id=WP_255123294.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	6093	6410	.	+	.	ID=gene-C9E94_RS14090;Name=C9E94_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14090;old_locus_tag=C9E94_14415
NZ_PYJR01000098.1	Protein Homology	CDS	6093	6410	.	+	0	ID=cds-WP_001267430.1;Parent=gene-C9E94_RS14090;Dbxref=GenBank:WP_001267430.1;Name=WP_001267430.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001267431.1;locus_tag=C9E94_RS14090;product=TIGR03745 family integrating conjugative element membrane protein;protein_id=WP_001267430.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	pseudogene	6412	6651	.	+	.	ID=gene-C9E94_RS23655;Name=C9E94_RS23655;end_range=6651,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23655;partial=true;pseudo=true
NZ_PYJR01000098.1	Protein Homology	CDS	6412	6651	.	+	0	ID=cds-C9E94_RS23655;Parent=gene-C9E94_RS23655;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=6651,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023416.6;locus_tag=C9E94_RS23655;partial=true;product=TIGR03750 family conjugal transfer protein;pseudo=true;transl_table=11
NZ_PYJR01000098.1	RefSeq	pseudogene	6760	7173	.	+	.	ID=gene-C9E94_RS23660;Name=C9E94_RS23660;end_range=7173,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23660;partial=true;pseudo=true
NZ_PYJR01000098.1	Protein Homology	CDS	6760	7173	.	+	0	ID=cds-C9E94_RS23660;Parent=gene-C9E94_RS23660;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=7173,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686463.1;locus_tag=C9E94_RS23660;partial=true;product=PFL_4703 family integrating conjugative element protein;pseudo=true;transl_table=11
NZ_PYJR01000098.1	RefSeq	pseudogene	7190	8189	.	+	.	ID=gene-C9E94_RS23665;Name=C9E94_RS23665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23665;partial=true;pseudo=true;start_range=.,7190
NZ_PYJR01000098.1	Protein Homology	CDS	7190	8189	.	+	0	ID=cds-C9E94_RS23665;Parent=gene-C9E94_RS23665;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802558.1;locus_tag=C9E94_RS23665;partial=true;product=hypothetical protein;pseudo=true;start_range=.,7190;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	8391	8882	.	+	.	ID=gene-C9E94_RS14115;Name=C9E94_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14115;old_locus_tag=C9E94_14440
NZ_PYJR01000098.1	Protein Homology	CDS	8391	8882	.	+	0	ID=cds-WP_000404200.1;Parent=gene-C9E94_RS14115;Dbxref=GenBank:WP_000404200.1;Name=WP_000404200.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000404200.1;locus_tag=C9E94_RS14115;product=GNAT family N-acetyltransferase;protein_id=WP_000404200.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	9235	9558	.	-	.	ID=gene-C9E94_RS14120;Name=C9E94_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14120;old_locus_tag=C9E94_14445
NZ_PYJR01000098.1	Protein Homology	CDS	9235	9558	.	-	0	ID=cds-WP_001098042.1;Parent=gene-C9E94_RS14120;Dbxref=GenBank:WP_001098042.1;Name=WP_001098042.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001098042.1;locus_tag=C9E94_RS14120;product=helix-turn-helix domain-containing protein;protein_id=WP_001098042.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	9642	9986	.	-	.	ID=gene-C9E94_RS14125;Name=C9E94_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14125;old_locus_tag=C9E94_14450
NZ_PYJR01000098.1	Protein Homology	CDS	9642	9986	.	-	0	ID=cds-WP_001172095.1;Parent=gene-C9E94_RS14125;Dbxref=GenBank:WP_001172095.1;Name=WP_001172095.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001172095.1;locus_tag=C9E94_RS14125;product=helix-turn-helix domain-containing protein;protein_id=WP_001172095.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	10063	10338	.	+	.	ID=gene-C9E94_RS14130;Name=C9E94_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14130;old_locus_tag=C9E94_14455
NZ_PYJR01000098.1	Protein Homology	CDS	10063	10338	.	+	0	ID=cds-WP_001074456.1;Parent=gene-C9E94_RS14130;Dbxref=GenBank:WP_001074456.1;Name=WP_001074456.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001074456.1;locus_tag=C9E94_RS14130;product=helix-turn-helix domain-containing protein;protein_id=WP_001074456.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	pseudogene	10451	10585	.	+	.	ID=gene-C9E94_RS23670;Name=C9E94_RS23670;end_range=10585,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23670;partial=true;pseudo=true
NZ_PYJR01000098.1	Protein Homology	CDS	10451	10585	.	+	0	ID=cds-C9E94_RS23670;Parent=gene-C9E94_RS23670;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009401,GO:0016020;end_range=10585,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461677.1;locus_tag=C9E94_RS23670;partial=true;product=PTS glucitol/sorbitol transporter subunit IIC;pseudo=true;transl_table=11
NZ_PYJR01000098.1	RefSeq	pseudogene	10586	11182	.	+	.	ID=gene-C9E94_RS14135;Name=C9E94_RS14135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS14135;old_locus_tag=C9E94_14460;partial=true;pseudo=true;start_range=.,10586
NZ_PYJR01000098.1	Protein Homology	CDS	10586	11182	.	+	0	ID=cds-C9E94_RS14135;Parent=gene-C9E94_RS14135;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012737272.1;locus_tag=C9E94_RS14135;partial=true;product=Gfo/Idh/MocA family protein;pseudo=true;start_range=.,10586;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	11218	11763	.	-	.	ID=gene-C9E94_RS14140;Name=C9E94_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14140;old_locus_tag=C9E94_14465
NZ_PYJR01000098.1	Protein Homology	CDS	11218	11763	.	-	0	ID=cds-WP_000718702.1;Parent=gene-C9E94_RS14140;Dbxref=GenBank:WP_000718702.1;Name=WP_000718702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000718702.1;locus_tag=C9E94_RS14140;product=hypothetical protein;protein_id=WP_000718702.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	11778	12818	.	-	.	ID=gene-C9E94_RS14145;Name=C9E94_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14145;old_locus_tag=C9E94_14470
NZ_PYJR01000098.1	Protein Homology	CDS	11778	12818	.	-	0	ID=cds-WP_135401097.1;Parent=gene-C9E94_RS14145;Dbxref=GenBank:WP_135401097.1;Name=WP_135401097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000617192.1;locus_tag=C9E94_RS14145;product=ParB/Srx family N-terminal domain-containing protein;protein_id=WP_135401097.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	13000	13179	.	-	.	ID=gene-C9E94_RS14150;Name=C9E94_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14150;old_locus_tag=C9E94_14475
NZ_PYJR01000098.1	Protein Homology	CDS	13000	13179	.	-	0	ID=cds-WP_229023603.1;Parent=gene-C9E94_RS14150;Dbxref=GenBank:WP_229023603.1;Name=WP_229023603.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024750.6;locus_tag=C9E94_RS14150;product=Arm DNA-binding domain-containing protein;protein_id=WP_229023603.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	13737	14534	.	-	.	ID=gene-C9E94_RS14155;Name=C9E94_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14155;old_locus_tag=C9E94_14480
NZ_PYJR01000098.1	Protein Homology	CDS	13737	14534	.	-	0	ID=cds-WP_000940054.1;Parent=gene-C9E94_RS14155;Dbxref=GenBank:WP_000940054.1;Name=WP_000940054.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000940052.1;locus_tag=C9E94_RS14155;product=helix-turn-helix transcriptional regulator;protein_id=WP_000940054.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	14651	14926	.	-	.	ID=gene-C9E94_RS14160;Name=C9E94_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14160;old_locus_tag=C9E94_14485
NZ_PYJR01000098.1	Protein Homology	CDS	14651	14926	.	-	0	ID=cds-WP_000409331.1;Parent=gene-C9E94_RS14160;Dbxref=GenBank:WP_000409331.1;Name=WP_000409331.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005166250.1;locus_tag=C9E94_RS14160;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_000409331.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	14930	15178	.	-	.	ID=gene-C9E94_RS14165;Name=C9E94_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14165;old_locus_tag=C9E94_14490
NZ_PYJR01000098.1	Protein Homology	CDS	14930	15178	.	-	0	ID=cds-WP_000168386.1;Parent=gene-C9E94_RS14165;Dbxref=GenBank:WP_000168386.1;Name=WP_000168386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000535213.1;locus_tag=C9E94_RS14165;product=CopG family ribbon-helix-helix protein;protein_id=WP_000168386.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	pseudogene	15255	16088	.	-	.	ID=gene-C9E94_RS23495;Name=C9E94_RS23495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23495;pseudo=true
NZ_PYJR01000098.1	Protein Homology	CDS	15255	16088	.	-	0	ID=cds-C9E94_RS23495;Parent=gene-C9E94_RS23495;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227719.1;locus_tag=C9E94_RS23495;product=DUF4942 domain-containing protein;pseudo=true;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	16204	16545	.	-	.	ID=gene-C9E94_RS14180;Name=C9E94_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14180;old_locus_tag=C9E94_14505
NZ_PYJR01000098.1	Protein Homology	CDS	16204	16545	.	-	0	ID=cds-WP_001194750.1;Parent=gene-C9E94_RS14180;Dbxref=GenBank:WP_001194750.1;Name=WP_001194750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001194750.1;locus_tag=C9E94_RS14180;product=TA system toxin CbtA family protein;protein_id=WP_001194750.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	16589	16930	.	-	.	ID=gene-C9E94_RS14185;Name=C9E94_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14185;old_locus_tag=C9E94_14510
NZ_PYJR01000098.1	Protein Homology	CDS	16589	16930	.	-	0	ID=cds-WP_000380486.1;Parent=gene-C9E94_RS14185;Dbxref=GenBank:WP_000380486.1;Name=WP_000380486.1;Ontology_term=GO:0051495;gbkey=CDS;go_process=positive regulation of cytoskeleton organization|0051495||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380486.1;locus_tag=C9E94_RS14185;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_000380486.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	16949	17860	.	+	.	ID=gene-C9E94_RS14190;Name=C9E94_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14190;old_locus_tag=C9E94_14515
NZ_PYJR01000098.1	Protein Homology	CDS	16949	17860	.	+	0	ID=cds-WP_135401099.1;Parent=gene-C9E94_RS14190;Dbxref=GenBank:WP_135401099.1;Name=WP_135401099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536490.1;locus_tag=C9E94_RS14190;product=5'-nucleotidase;protein_id=WP_135401099.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	pseudogene	17938	18814	.	-	.	ID=gene-C9E94_RS14195;Name=C9E94_RS14195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS14195;old_locus_tag=C9E94_14520;pseudo=true
NZ_PYJR01000098.1	Protein Homology	CDS	17938	18814	.	-	0	ID=cds-C9E94_RS14195;Parent=gene-C9E94_RS14195;Note=frameshifted;Ontology_term=GO:0009307,GO:0015666;gbkey=CDS;go_function=restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465694.1;locus_tag=C9E94_RS14195;product=phosphorothioated DNA-binding restriction endonuclease;pseudo=true;transl_table=11
NZ_PYJR01000098.1	RefSeq	pseudogene	19030	20294	.	-	.	ID=gene-C9E94_RS14200;Name=C9E94_RS14200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS14200;old_locus_tag=C9E94_14525;pseudo=true
NZ_PYJR01000098.1	Protein Homology	CDS	19030	20294	.	-	0	ID=cds-C9E94_RS14200;Parent=gene-C9E94_RS14200;Note=frameshifted;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227696.1;locus_tag=C9E94_RS14200;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	20481	20565	.	-	.	ID=gene-C9E94_RS14205;Name=C9E94_RS14205;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS14205;old_locus_tag=C9E94_14530
NZ_PYJR01000098.1	tRNAscan-SE	tRNA	20481	20565	.	-	.	ID=rna-C9E94_RS14205;Parent=gene-C9E94_RS14205;anticodon=(pos:complement(20529..20531));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS14205;product=tRNA-Leu
NZ_PYJR01000098.1	tRNAscan-SE	exon	20481	20565	.	-	.	ID=exon-C9E94_RS14205-1;Parent=rna-C9E94_RS14205;anticodon=(pos:complement(20529..20531));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS14205;product=tRNA-Leu
NZ_PYJR01000098.1	RefSeq	gene	20788	21807	.	+	.	ID=gene-C9E94_RS14210;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=C9E94_RS14210;old_locus_tag=C9E94_14535
NZ_PYJR01000098.1	Protein Homology	CDS	20788	21807	.	+	0	ID=cds-WP_000152563.1;Parent=gene-C9E94_RS14210;Dbxref=GenBank:WP_000152563.1;Name=WP_000152563.1;Ontology_term=GO:0006631,GO:0008106,GO:0016616;gbkey=CDS;gene=ahr;go_function=alcohol dehydrogenase (NADP+) activity|0008106||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463346.1;locus_tag=C9E94_RS14210;product=NADPH-dependent aldehyde reductase Ahr;protein_id=WP_000152563.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	21835	22365	.	-	.	ID=gene-C9E94_RS14215;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=C9E94_RS14215;old_locus_tag=C9E94_14540
NZ_PYJR01000098.1	Protein Homology	CDS	21835	22365	.	-	0	ID=cds-WP_000896758.1;Parent=gene-C9E94_RS14215;Dbxref=GenBank:WP_000896758.1;Name=WP_000896758.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463345.1;locus_tag=C9E94_RS14215;product=gluconokinase;protein_id=WP_000896758.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	22582	23613	.	+	.	ID=gene-C9E94_RS14220;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=C9E94_RS14220;old_locus_tag=C9E94_14545
NZ_PYJR01000098.1	Protein Homology	CDS	22582	23613	.	+	0	ID=cds-WP_135401100.1;Parent=gene-C9E94_RS14220;Dbxref=GenBank:WP_135401100.1;Name=WP_135401100.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463344.1;locus_tag=C9E94_RS14220;product=L-idonate 5-dehydrogenase;protein_id=WP_135401100.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	23638	24402	.	+	.	ID=gene-C9E94_RS14225;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=C9E94_RS14225;old_locus_tag=C9E94_14550
NZ_PYJR01000098.1	Protein Homology	CDS	23638	24402	.	+	0	ID=cds-WP_001581703.1;Parent=gene-C9E94_RS14225;Dbxref=GenBank:WP_001581703.1;Name=WP_001581703.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463343.1;locus_tag=C9E94_RS14225;product=gluconate 5-dehydrogenase;protein_id=WP_001581703.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	24464	25783	.	+	.	ID=gene-C9E94_RS14230;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=protein_coding;locus_tag=C9E94_RS14230;old_locus_tag=C9E94_14555
NZ_PYJR01000098.1	Protein Homology	CDS	24464	25783	.	+	0	ID=cds-WP_001128356.1;Parent=gene-C9E94_RS14230;Dbxref=GenBank:WP_001128356.1;Name=WP_001128356.1;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=C9E94_RS14230;product=gnt-II system L-idonate transporter;protein_id=WP_001128356.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	25847	26845	.	+	.	ID=gene-C9E94_RS14235;Name=idnR;gbkey=Gene;gene=idnR;gene_biotype=protein_coding;gene_synonym=gntH,yjgS;locus_tag=C9E94_RS14235;old_locus_tag=C9E94_14560
NZ_PYJR01000098.1	Protein Homology	CDS	25847	26845	.	+	0	ID=cds-WP_001244064.1;Parent=gene-C9E94_RS14235;Dbxref=GenBank:WP_001244064.1;Name=WP_001244064.1;Ontology_term=GO:0006355,GO:0019521,GO:0003700;gbkey=CDS;gene=idnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463341.1;locus_tag=C9E94_RS14235;product=DNA-binding transcriptional regulator IdnR;protein_id=WP_001244064.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	27051	28133	.	-	.	ID=gene-C9E94_RS14240;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=C9E94_RS14240;old_locus_tag=C9E94_14565
NZ_PYJR01000098.1	Protein Homology	CDS	27051	28133	.	-	0	ID=cds-WP_001182242.1;Parent=gene-C9E94_RS14240;Dbxref=GenBank:WP_001182242.1;Name=WP_001182242.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463340.1;locus_tag=C9E94_RS14240;product=LPS export ABC transporter permease LptG;protein_id=WP_001182242.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	28133	29233	.	-	.	ID=gene-C9E94_RS14245;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=C9E94_RS14245;old_locus_tag=C9E94_14570
NZ_PYJR01000098.1	Protein Homology	CDS	28133	29233	.	-	0	ID=cds-WP_000584132.1;Parent=gene-C9E94_RS14245;Dbxref=GenBank:WP_000584132.1;Name=WP_000584132.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463339.1;locus_tag=C9E94_RS14245;product=LPS export ABC transporter permease LptF;protein_id=WP_000584132.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	29297	29347	.	-	.	ID=gene-C9E94_RS23500;Name=C9E94_RS23500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23500
NZ_PYJR01000098.1	Protein Homology	CDS	29297	29347	.	-	0	ID=cds-WP_212724070.1;Parent=gene-C9E94_RS23500;Dbxref=GenBank:WP_212724070.1;Name=WP_212724070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=C9E94_RS23500;product=hypothetical protein;protein_id=WP_212724070.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	29628	31139	.	+	.	ID=gene-C9E94_RS14255;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=C9E94_RS14255;old_locus_tag=C9E94_14585
NZ_PYJR01000098.1	Protein Homology	CDS	29628	31139	.	+	0	ID=cds-WP_000397158.1;Parent=gene-C9E94_RS14255;Dbxref=GenBank:WP_000397158.1;Name=WP_000397158.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463337.1;locus_tag=C9E94_RS14255;product=leucyl aminopeptidase;protein_id=WP_000397158.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	31276	31719	.	+	.	ID=gene-C9E94_RS14260;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=C9E94_RS14260;old_locus_tag=C9E94_14590
NZ_PYJR01000098.1	Protein Homology	CDS	31276	31719	.	+	0	ID=cds-WP_001523689.1;Parent=gene-C9E94_RS14260;Dbxref=GenBank:WP_001523689.1;Name=WP_001523689.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=C9E94_RS14260;product=DNA polymerase III subunit chi;protein_id=WP_001523689.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	31719	34574	.	+	.	ID=gene-C9E94_RS14265;Name=C9E94_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14265;old_locus_tag=C9E94_14595
NZ_PYJR01000098.1	Protein Homology	CDS	31719	34574	.	+	0	ID=cds-WP_135401101.1;Parent=gene-C9E94_RS14265;Dbxref=GenBank:WP_135401101.1;Name=WP_135401101.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=C9E94_RS14265;product=valine--tRNA ligase;protein_id=WP_135401101.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	34716	35903	.	-	.	ID=gene-C9E94_RS14270;Name=C9E94_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14270;old_locus_tag=C9E94_14600
NZ_PYJR01000098.1	Protein Homology	CDS	34716	35903	.	-	0	ID=cds-WP_135401102.1;Parent=gene-C9E94_RS14270;Dbxref=GenBank:WP_135401102.1;Name=WP_135401102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463334.1;locus_tag=C9E94_RS14270;product=YjgN family protein;protein_id=WP_135401102.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	36098	36601	.	+	.	ID=gene-C9E94_RS14275;Name=C9E94_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14275;old_locus_tag=C9E94_14605
NZ_PYJR01000098.1	Protein Homology	CDS	36098	36601	.	+	0	ID=cds-WP_001519079.1;Parent=gene-C9E94_RS14275;Dbxref=GenBank:WP_001519079.1;Name=WP_001519079.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463333.1;locus_tag=C9E94_RS14275;product=GNAT family N-acetyltransferase;protein_id=WP_001519079.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	36708	37196	.	+	.	ID=gene-C9E94_RS14280;Name=C9E94_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14280;old_locus_tag=C9E94_14610
NZ_PYJR01000098.1	Protein Homology	CDS	36708	37196	.	+	0	ID=cds-WP_000826193.1;Parent=gene-C9E94_RS14280;Dbxref=GenBank:WP_000826193.1;Name=WP_000826193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463332.1;locus_tag=C9E94_RS14280;product=DUF3617 domain-containing protein;protein_id=WP_000826193.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	37430	38242	.	-	.	ID=gene-C9E94_RS14285;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=C9E94_RS14285;old_locus_tag=C9E94_14615
NZ_PYJR01000098.1	Protein Homology	CDS	37430	38242	.	-	0	ID=cds-WP_000218446.1;Parent=gene-C9E94_RS14285;Dbxref=GenBank:WP_000218446.1;Name=WP_000218446.1;Ontology_term=GO:0006400,GO:0004497,GO:0045301,GO:0046872;gbkey=CDS;gene=miaE;go_function=monooxygenase activity|0004497||IEA,tRNA 2-(methylsulfanyl)-N(6)-isopentenyladenosine(37) hydroxylase activity|0045301||IEA,metal ion binding|0046872||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463331.1;locus_tag=C9E94_RS14285;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=WP_000218446.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	38254	38670	.	-	.	ID=gene-C9E94_RS14290;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=C9E94_RS14290;old_locus_tag=C9E94_14620
NZ_PYJR01000098.1	Protein Homology	CDS	38254	38670	.	-	0	ID=cds-WP_000002940.1;Parent=gene-C9E94_RS14290;Dbxref=GenBank:WP_000002940.1;Name=WP_000002940.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463330.1;locus_tag=C9E94_RS14290;product=ribonuclease E inhibitor RraB;protein_id=WP_000002940.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	38771	38866	.	+	.	ID=gene-C9E94_RS23910;Name=argL;gbkey=Gene;gene=argL;gene_biotype=protein_coding;locus_tag=C9E94_RS23910
NZ_PYJR01000098.1	Protein Homology	CDS	38771	38866	.	+	0	ID=cds-WP_223148976.1;Parent=gene-C9E94_RS23910;Dbxref=GenBank:WP_223148976.1;Name=WP_223148976.1;gbkey=CDS;gene=argL;inference=COORDINATES: protein motif:HMM:NF047283.2;locus_tag=C9E94_RS23910;product=putative translational regulatory protein ArgL;protein_id=WP_223148976.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	38836	39840	.	+	.	ID=gene-C9E94_RS14295;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=C9E94_RS14295;old_locus_tag=C9E94_14625
NZ_PYJR01000098.1	Protein Homology	CDS	38836	39840	.	+	0	ID=cds-WP_000103041.1;Parent=gene-C9E94_RS14295;Dbxref=GenBank:WP_000103041.1;Name=WP_000103041.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463329.1;locus_tag=C9E94_RS14295;product=ornithine carbamoyltransferase;protein_id=WP_000103041.1;transl_table=11
NZ_PYJR01000098.1	RefSeq	gene	39914	40366	.	-	.	ID=gene-C9E94_RS14300;Name=C9E94_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14300;old_locus_tag=C9E94_14630
NZ_PYJR01000098.1	Protein Homology	CDS	39914	40366	.	-	0	ID=cds-WP_000583455.1;Parent=gene-C9E94_RS14300;Dbxref=GenBank:WP_000583455.1;Name=WP_000583455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463328.1;locus_tag=C9E94_RS14300;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000583455.1;transl_table=11
##sequence-region NZ_PYJR01000086.1 1 39903
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000086.1	RefSeq	region	1	39903	.	+	.	ID=NZ_PYJR01000086.1:1..39903;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000086.1	RefSeq	gene	58	133	.	-	.	ID=gene-C9E94_RS11505;Name=C9E94_RS11505;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS11505;old_locus_tag=C9E94_11760
NZ_PYJR01000086.1	tRNAscan-SE	tRNA	58	133	.	-	.	ID=rna-C9E94_RS11505;Parent=gene-C9E94_RS11505;anticodon=(pos:complement(98..100));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS11505;product=tRNA-Val
NZ_PYJR01000086.1	tRNAscan-SE	exon	58	133	.	-	.	ID=exon-C9E94_RS11505-1;Parent=rna-C9E94_RS11505;anticodon=(pos:complement(98..100));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS11505;product=tRNA-Val
NZ_PYJR01000086.1	RefSeq	gene	270	345	.	-	.	ID=gene-C9E94_RS11510;Name=C9E94_RS11510;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS11510;old_locus_tag=C9E94_11765
NZ_PYJR01000086.1	tRNAscan-SE	tRNA	270	345	.	-	.	ID=rna-C9E94_RS11510;Parent=gene-C9E94_RS11510;anticodon=(pos:complement(310..312));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS11510;product=tRNA-Lys
NZ_PYJR01000086.1	tRNAscan-SE	exon	270	345	.	-	.	ID=exon-C9E94_RS11510-1;Parent=rna-C9E94_RS11510;anticodon=(pos:complement(310..312));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS11510;product=tRNA-Lys
NZ_PYJR01000086.1	RefSeq	gene	510	1298	.	-	.	ID=gene-C9E94_RS11515;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=C9E94_RS11515;old_locus_tag=C9E94_11770
NZ_PYJR01000086.1	Protein Homology	CDS	510	1298	.	-	0	ID=cds-WP_000097553.1;Parent=gene-C9E94_RS11515;Dbxref=GenBank:WP_000097553.1;Name=WP_000097553.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459735.1;locus_tag=C9E94_RS11515;product=cell division protein CpoB;protein_id=WP_000097553.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	1308	1832	.	-	.	ID=gene-C9E94_RS11520;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=C9E94_RS11520;old_locus_tag=C9E94_11775
NZ_PYJR01000086.1	Protein Homology	CDS	1308	1832	.	-	0	ID=cds-WP_001176621.1;Parent=gene-C9E94_RS11520;Dbxref=GenBank:WP_001176621.1;Name=WP_001176621.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459734.1;locus_tag=C9E94_RS11520;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001176621.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	1867	3159	.	-	.	ID=gene-C9E94_RS11525;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=C9E94_RS11525;old_locus_tag=C9E94_11780
NZ_PYJR01000086.1	Protein Homology	CDS	1867	3159	.	-	0	ID=cds-WP_001562341.1;Parent=gene-C9E94_RS11525;Dbxref=GenBank:WP_001562341.1;Name=WP_001562341.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=C9E94_RS11525;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_001562341.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	3283	4440	.	-	.	ID=gene-C9E94_RS11530;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=C9E94_RS11530;old_locus_tag=C9E94_11785
NZ_PYJR01000086.1	Protein Homology	CDS	3283	4440	.	-	0	ID=cds-WP_135401032.1;Parent=gene-C9E94_RS11530;Dbxref=GenBank:WP_135401032.1;Name=WP_135401032.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=C9E94_RS11530;product=cell envelope integrity protein TolA;protein_id=WP_135401032.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	4505	4933	.	-	.	ID=gene-C9E94_RS11535;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=C9E94_RS11535;old_locus_tag=C9E94_11790
NZ_PYJR01000086.1	Protein Homology	CDS	4505	4933	.	-	0	ID=cds-WP_000124676.1;Parent=gene-C9E94_RS11535;Dbxref=GenBank:WP_000124676.1;Name=WP_000124676.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=C9E94_RS11535;product=colicin uptake protein TolR;protein_id=WP_000124676.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	4937	5629	.	-	.	ID=gene-C9E94_RS11540;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=C9E94_RS11540;old_locus_tag=C9E94_11795
NZ_PYJR01000086.1	Protein Homology	CDS	4937	5629	.	-	0	ID=cds-WP_000131318.1;Parent=gene-C9E94_RS11540;Dbxref=GenBank:WP_000131318.1;Name=WP_000131318.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459730.1;locus_tag=C9E94_RS11540;product=Tol-Pal system protein TolQ;protein_id=WP_000131318.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	5626	6030	.	-	.	ID=gene-C9E94_RS11545;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=C9E94_RS11545;old_locus_tag=C9E94_11800
NZ_PYJR01000086.1	Protein Homology	CDS	5626	6030	.	-	0	ID=cds-WP_001046240.1;Parent=gene-C9E94_RS11545;Dbxref=GenBank:WP_001046240.1;Name=WP_001046240.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459729.1;locus_tag=C9E94_RS11545;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_001046240.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	6259	6552	.	-	.	ID=gene-C9E94_RS11550;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=C9E94_RS11550;old_locus_tag=C9E94_11805
NZ_PYJR01000086.1	Protein Homology	CDS	6259	6552	.	-	0	ID=cds-WP_000148790.1;Parent=gene-C9E94_RS11550;Dbxref=GenBank:WP_000148790.1;Name=WP_000148790.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006712473.1;locus_tag=C9E94_RS11550;product=cyd operon protein YbgE;protein_id=WP_000148790.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	6552	6665	.	-	.	ID=gene-C9E94_RS11555;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;gene_synonym=ybgT;locus_tag=C9E94_RS11555;old_locus_tag=C9E94_11810
NZ_PYJR01000086.1	Protein Homology	CDS	6552	6665	.	-	0	ID=cds-WP_000270278.1;Parent=gene-C9E94_RS11555;Dbxref=GenBank:WP_000270278.1;Name=WP_000270278.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459727.1;locus_tag=C9E94_RS11555;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_000270278.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	6680	7819	.	-	.	ID=gene-C9E94_RS11560;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=C9E94_RS11560;old_locus_tag=C9E94_11815
NZ_PYJR01000086.1	Protein Homology	CDS	6680	7819	.	-	0	ID=cds-WP_000568258.1;Parent=gene-C9E94_RS11560;Dbxref=GenBank:WP_000568258.1;Name=WP_000568258.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=C9E94_RS11560;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000568258.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	7835	9403	.	-	.	ID=gene-C9E94_RS11565;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=C9E94_RS11565;old_locus_tag=C9E94_11820
NZ_PYJR01000086.1	Protein Homology	CDS	7835	9403	.	-	0	ID=cds-WP_000884369.1;Parent=gene-C9E94_RS11565;Dbxref=GenBank:WP_000884369.1;Name=WP_000884369.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459725.1;locus_tag=C9E94_RS11565;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000884369.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	pseudogene	10836	10958	.	-	.	ID=gene-C9E94_RS23475;Name=C9E94_RS23475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23475;partial=true;pseudo=true;start_range=.,10836
NZ_PYJR01000086.1	Protein Homology	CDS	10836	10958	.	-	0	ID=cds-C9E94_RS23475;Parent=gene-C9E94_RS23475;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110227.1;locus_tag=C9E94_RS23475;partial=true;product=PocR ligand-binding domain-containing protein;pseudo=true;start_range=.,10836;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	10987	11856	.	-	.	ID=gene-C9E94_RS11575;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=C9E94_RS11575;old_locus_tag=C9E94_11830
NZ_PYJR01000086.1	Protein Homology	CDS	10987	11856	.	-	0	ID=cds-WP_000114631.1;Parent=gene-C9E94_RS11575;Dbxref=GenBank:WP_000114631.1;Name=WP_000114631.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=C9E94_RS11575;product=succinate--CoA ligase subunit alpha;protein_id=WP_000114631.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	11856	13022	.	-	.	ID=gene-C9E94_RS11580;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=C9E94_RS11580;old_locus_tag=C9E94_11835
NZ_PYJR01000086.1	Protein Homology	CDS	11856	13022	.	-	0	ID=cds-WP_001048590.1;Parent=gene-C9E94_RS11580;Dbxref=GenBank:WP_001048590.1;Name=WP_001048590.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=C9E94_RS11580;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_001048590.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	13164	14372	.	-	.	ID=gene-C9E94_RS11585;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=C9E94_RS11585;old_locus_tag=C9E94_11840
NZ_PYJR01000086.1	Protein Homology	CDS	13164	14372	.	-	0	ID=cds-WP_079944728.1;Parent=gene-C9E94_RS11585;Dbxref=GenBank:WP_079944728.1;Name=WP_079944728.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459722.1;locus_tag=C9E94_RS11585;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_079944728.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	14387	17188	.	-	.	ID=gene-C9E94_RS11590;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=C9E94_RS11590;old_locus_tag=C9E94_11845
NZ_PYJR01000086.1	Protein Homology	CDS	14387	17188	.	-	0	ID=cds-WP_001181500.1;Parent=gene-C9E94_RS11590;Dbxref=GenBank:WP_001181500.1;Name=WP_001181500.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459721.1;locus_tag=C9E94_RS11590;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_001181500.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	17714	18430	.	-	.	ID=gene-C9E94_RS11595;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=C9E94_RS11595;old_locus_tag=C9E94_11850
NZ_PYJR01000086.1	Protein Homology	CDS	17714	18430	.	-	0	ID=cds-WP_001537859.1;Parent=gene-C9E94_RS11595;Dbxref=GenBank:WP_001537859.1;Name=WP_001537859.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=C9E94_RS11595;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_001537859.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	18447	20213	.	-	.	ID=gene-C9E94_RS11600;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=C9E94_RS11600;old_locus_tag=C9E94_11855
NZ_PYJR01000086.1	Protein Homology	CDS	18447	20213	.	-	0	ID=cds-WP_000775561.1;Parent=gene-C9E94_RS11600;Dbxref=GenBank:WP_000775561.1;Name=WP_000775561.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=C9E94_RS11600;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_000775561.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	20213	20560	.	-	.	ID=gene-C9E94_RS11605;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=C9E94_RS11605;old_locus_tag=C9E94_11860
NZ_PYJR01000086.1	Protein Homology	CDS	20213	20560	.	-	0	ID=cds-WP_000254356.1;Parent=gene-C9E94_RS11605;Dbxref=GenBank:WP_000254356.1;Name=WP_000254356.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=C9E94_RS11605;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_000254356.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	20554	20958	.	-	.	ID=gene-C9E94_RS11610;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=C9E94_RS11610;old_locus_tag=C9E94_11865
NZ_PYJR01000086.1	Protein Homology	CDS	20554	20958	.	-	0	ID=cds-WP_000263340.1;Parent=gene-C9E94_RS11610;Dbxref=GenBank:WP_000263340.1;Name=WP_000263340.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=C9E94_RS11610;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_000263340.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	21341	21472	.	+	.	ID=gene-C9E94_RS23900;Name=C9E94_RS23900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23900
NZ_PYJR01000086.1	Protein Homology	CDS	21341	21472	.	+	0	ID=cds-WP_418142699.1;Parent=gene-C9E94_RS23900;Dbxref=GenBank:WP_418142699.1;Name=WP_418142699.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049035.1;locus_tag=C9E94_RS23900;product=hypothetical protein;protein_id=WP_418142699.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	21698	22981	.	+	.	ID=gene-C9E94_RS11615;Name=C9E94_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11615;old_locus_tag=C9E94_11880
NZ_PYJR01000086.1	Protein Homology	CDS	21698	22981	.	+	0	ID=cds-WP_000785811.1;Parent=gene-C9E94_RS11615;Dbxref=GenBank:WP_000785811.1;Name=WP_000785811.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459715.1;locus_tag=C9E94_RS11615;product=citrate synthase;protein_id=WP_000785811.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	23118	24164	.	+	.	ID=gene-C9E94_RS11620;Name=C9E94_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11620;old_locus_tag=C9E94_11885
NZ_PYJR01000086.1	Protein Homology	CDS	23118	24164	.	+	0	ID=cds-WP_001122035.1;Parent=gene-C9E94_RS11620;Dbxref=GenBank:WP_001122035.1;Name=WP_001122035.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459714.1;locus_tag=C9E94_RS11620;product=AbrB family transcriptional regulator;protein_id=WP_001122035.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	24219	25010	.	-	.	ID=gene-C9E94_RS11625;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=C9E94_RS11625;old_locus_tag=C9E94_11890
NZ_PYJR01000086.1	Protein Homology	CDS	24219	25010	.	-	0	ID=cds-WP_001113966.1;Parent=gene-C9E94_RS11625;Dbxref=GenBank:WP_001113966.1;Name=WP_001113966.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459713.1;locus_tag=C9E94_RS11625;product=endonuclease VIII;protein_id=WP_001113966.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	25132	25866	.	-	.	ID=gene-C9E94_RS11630;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=C9E94_RS11630;old_locus_tag=C9E94_11895
NZ_PYJR01000086.1	Protein Homology	CDS	25132	25866	.	-	0	ID=cds-WP_001017923.1;Parent=gene-C9E94_RS11630;Dbxref=GenBank:WP_001017923.1;Name=WP_001017923.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459699.1;locus_tag=C9E94_RS11630;product=5-oxoprolinase subunit PxpA;protein_id=WP_001017923.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	25856	26788	.	-	.	ID=gene-C9E94_RS11635;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=C9E94_RS11635;old_locus_tag=C9E94_11900
NZ_PYJR01000086.1	Protein Homology	CDS	25856	26788	.	-	0	ID=cds-WP_000932044.1;Parent=gene-C9E94_RS11635;Dbxref=GenBank:WP_000932044.1;Name=WP_000932044.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpC;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459698.1;locus_tag=C9E94_RS11635;product=5-oxoprolinase subunit PxpC;protein_id=WP_000932044.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	26782	27438	.	-	.	ID=gene-C9E94_RS11640;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=C9E94_RS11640;old_locus_tag=C9E94_11905
NZ_PYJR01000086.1	Protein Homology	CDS	26782	27438	.	-	0	ID=cds-WP_001188373.1;Parent=gene-C9E94_RS11640;Dbxref=GenBank:WP_001188373.1;Name=WP_001188373.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459697.1;locus_tag=C9E94_RS11640;product=5-oxoprolinase subunit PxpB;protein_id=WP_001188373.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	27454	28197	.	-	.	ID=gene-C9E94_RS11645;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=C9E94_RS11645;old_locus_tag=C9E94_11910
NZ_PYJR01000086.1	Protein Homology	CDS	27454	28197	.	-	0	ID=cds-WP_000798844.1;Parent=gene-C9E94_RS11645;Dbxref=GenBank:WP_000798844.1;Name=WP_000798844.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=C9E94_RS11645;product=radiation resistance protein YbgI;protein_id=WP_000798844.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	28526	30007	.	+	.	ID=gene-C9E94_RS11650;Name=C9E94_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11650;old_locus_tag=C9E94_11920
NZ_PYJR01000086.1	Protein Homology	CDS	28526	30007	.	+	0	ID=cds-WP_135401034.1;Parent=gene-C9E94_RS11650;Dbxref=GenBank:WP_135401034.1;Name=WP_135401034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459695.1;locus_tag=C9E94_RS11650;product=MFS transporter;protein_id=WP_135401034.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	30046	31467	.	-	.	ID=gene-C9E94_RS11655;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=C9E94_RS11655;old_locus_tag=C9E94_11925
NZ_PYJR01000086.1	Protein Homology	CDS	30046	31467	.	-	0	ID=cds-WP_135401035.1;Parent=gene-C9E94_RS11655;Dbxref=GenBank:WP_135401035.1;Name=WP_135401035.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459694.1;locus_tag=C9E94_RS11655;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_135401035.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	31578	31784	.	-	.	ID=gene-C9E94_RS11660;Name=C9E94_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11660;old_locus_tag=C9E94_11930
NZ_PYJR01000086.1	Protein Homology	CDS	31578	31784	.	-	0	ID=cds-WP_000401437.1;Parent=gene-C9E94_RS11660;Dbxref=GenBank:WP_000401437.1;Name=WP_000401437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459693.1;locus_tag=C9E94_RS11660;product=YbfA family protein;protein_id=WP_000401437.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	32121	32210	.	+	.	ID=gene-C9E94_RS11665;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=C9E94_RS11665;old_locus_tag=C9E94_11935
NZ_PYJR01000086.1	Protein Homology	CDS	32121	32210	.	+	0	ID=cds-WP_001670793.1;Parent=gene-C9E94_RS11665;Dbxref=GenBank:WP_001670793.1;Name=WP_001670793.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=C9E94_RS11665;product=K(+)-transporting ATPase subunit F;protein_id=WP_001670793.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	32210	33889	.	+	.	ID=gene-C9E94_RS11670;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=C9E94_RS11670;old_locus_tag=C9E94_11940
NZ_PYJR01000086.1	Protein Homology	CDS	32210	33889	.	+	0	ID=cds-WP_079834834.1;Parent=gene-C9E94_RS11670;Dbxref=GenBank:WP_079834834.1;Name=WP_079834834.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459691.1;locus_tag=C9E94_RS11670;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_079834834.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	33910	35958	.	+	.	ID=gene-C9E94_RS11675;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=C9E94_RS11675;old_locus_tag=C9E94_11945
NZ_PYJR01000086.1	Protein Homology	CDS	33910	35958	.	+	0	ID=cds-WP_000088034.1;Parent=gene-C9E94_RS11675;Dbxref=GenBank:WP_000088034.1;Name=WP_000088034.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459690.1;locus_tag=C9E94_RS11675;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_000088034.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	35967	36551	.	+	.	ID=gene-C9E94_RS11680;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=C9E94_RS11680;old_locus_tag=C9E94_11950
NZ_PYJR01000086.1	Protein Homology	CDS	35967	36551	.	+	0	ID=cds-WP_001528784.1;Parent=gene-C9E94_RS11680;Dbxref=GenBank:WP_001528784.1;Name=WP_001528784.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459689.1;locus_tag=C9E94_RS11680;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_001528784.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	36548	39232	.	+	.	ID=gene-C9E94_RS11685;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=C9E94_RS11685;old_locus_tag=C9E94_11955
NZ_PYJR01000086.1	Protein Homology	CDS	36548	39232	.	+	0	ID=cds-WP_023221164.1;Parent=gene-C9E94_RS11685;Dbxref=GenBank:WP_023221164.1;Name=WP_023221164.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459688.1;locus_tag=C9E94_RS11685;product=two-component system sensor histidine kinase KdpD;protein_id=WP_023221164.1;transl_table=11
NZ_PYJR01000086.1	RefSeq	gene	39229	39903	.	+	.	ID=gene-C9E94_RS11690;Name=kdpE;end_range=39903,.;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=C9E94_RS11690;old_locus_tag=C9E94_11960;partial=true
NZ_PYJR01000086.1	Protein Homology	CDS	39229	39903	.	+	0	ID=cds-WP_000186053.1;Parent=gene-C9E94_RS11690;Dbxref=GenBank:WP_000186053.1;Name=WP_000186053.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;end_range=39903,.;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459687.1;locus_tag=C9E94_RS11690;partial=true;product=two-component system response regulator KdpE;protein_id=WP_000186053.1;transl_table=11
##sequence-region NZ_PYJR01000071.1 1 38991
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000071.1	RefSeq	region	1	38991	.	+	.	ID=NZ_PYJR01000071.1:1..38991;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000071.1	RefSeq	gene	158	820	.	+	.	ID=gene-C9E94_RS09110;Name=envR;gbkey=Gene;gene=envR;gene_biotype=protein_coding;locus_tag=C9E94_RS09110;old_locus_tag=C9E94_09320
NZ_PYJR01000071.1	Protein Homology	CDS	158	820	.	+	0	ID=cds-WP_001085725.1;Parent=gene-C9E94_RS09110;Dbxref=GenBank:WP_001085725.1;Name=WP_001085725.1;gbkey=CDS;gene=envR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462299.1;locus_tag=C9E94_RS09110;product=acrEF/envCD operon transcriptional regulator;protein_id=WP_001085725.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	823	2922	.	-	.	ID=gene-C9E94_RS09115;Name=C9E94_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09115;old_locus_tag=C9E94_09325
NZ_PYJR01000071.1	Protein Homology	CDS	823	2922	.	-	0	ID=cds-WP_135400955.1;Parent=gene-C9E94_RS09115;Dbxref=GenBank:WP_135400955.1;Name=WP_135400955.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462298.1;locus_tag=C9E94_RS09115;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_135400955.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	3073	3237	.	-	.	ID=gene-C9E94_RS09120;Name=C9E94_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09120;old_locus_tag=C9E94_09330
NZ_PYJR01000071.1	Protein Homology	CDS	3073	3237	.	-	0	ID=cds-WP_000620015.1;Parent=gene-C9E94_RS09120;Dbxref=GenBank:WP_000620015.1;Name=WP_000620015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462297.1;locus_tag=C9E94_RS09120;product=DUF2556 family protein;protein_id=WP_000620015.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	3320	4204	.	-	.	ID=gene-C9E94_RS09125;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=C9E94_RS09125;old_locus_tag=C9E94_09335
NZ_PYJR01000071.1	Protein Homology	CDS	3320	4204	.	-	0	ID=cds-WP_000642611.1;Parent=gene-C9E94_RS09125;Dbxref=GenBank:WP_000642611.1;Name=WP_000642611.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462296.1;locus_tag=C9E94_RS09125;product=adenine-specific DNA-methyltransferase;protein_id=WP_000642611.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	4290	4586	.	-	.	ID=gene-C9E94_RS09130;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=C9E94_RS09130;old_locus_tag=C9E94_09340
NZ_PYJR01000071.1	Protein Homology	CDS	4290	4586	.	-	0	ID=cds-WP_000462905.1;Parent=gene-C9E94_RS09130;Dbxref=GenBank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=C9E94_RS09130;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	4612	5577	.	-	.	ID=gene-C9E94_RS09135;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=C9E94_RS09135;old_locus_tag=C9E94_09345
NZ_PYJR01000071.1	Protein Homology	CDS	4612	5577	.	-	0	ID=cds-WP_001219664.1;Parent=gene-C9E94_RS09135;Dbxref=GenBank:WP_001219664.1;Name=WP_001219664.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=C9E94_RS09135;product=tRNA dihydrouridine synthase DusB;protein_id=WP_001219664.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	5844	6119	.	-	.	ID=gene-C9E94_RS09140;Name=C9E94_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09140
NZ_PYJR01000071.1	Protein Homology	CDS	5844	6119	.	-	0	ID=cds-WP_308411203.1;Parent=gene-C9E94_RS09140;Dbxref=GenBank:WP_308411203.1;Name=WP_308411203.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012420.6;locus_tag=C9E94_RS09140;product=carbonic anhydrase family protein;protein_id=WP_308411203.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	6239	7120	.	-	.	ID=gene-C9E94_RS09145;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=C9E94_RS09145;old_locus_tag=C9E94_09350
NZ_PYJR01000071.1	Protein Homology	CDS	6239	7120	.	-	0	ID=cds-WP_001145849.1;Parent=gene-C9E94_RS09145;Dbxref=GenBank:WP_001145849.1;Name=WP_001145849.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462293.1;locus_tag=C9E94_RS09145;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_001145849.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	7132	8583	.	-	.	ID=gene-C9E94_RS09150;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=C9E94_RS09150;old_locus_tag=C9E94_09355
NZ_PYJR01000071.1	Protein Homology	CDS	7132	8583	.	-	0	ID=cds-WP_001175684.1;Parent=gene-C9E94_RS09150;Dbxref=GenBank:WP_001175684.1;Name=WP_001175684.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462292.1;locus_tag=C9E94_RS09150;product=sodium/pantothenate symporter;protein_id=WP_001175684.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	8573	8815	.	-	.	ID=gene-C9E94_RS09155;Name=C9E94_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09155;old_locus_tag=C9E94_09360
NZ_PYJR01000071.1	Protein Homology	CDS	8573	8815	.	-	0	ID=cds-WP_000340016.1;Parent=gene-C9E94_RS09155;Dbxref=GenBank:WP_000340016.1;Name=WP_000340016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462291.1;locus_tag=C9E94_RS09155;product=YhdT family protein;protein_id=WP_000340016.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	8924	10273	.	-	.	ID=gene-C9E94_RS09160;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=C9E94_RS09160;old_locus_tag=C9E94_09365
NZ_PYJR01000071.1	Protein Homology	CDS	8924	10273	.	-	0	ID=cds-WP_000884627.1;Parent=gene-C9E94_RS09160;Dbxref=GenBank:WP_000884627.1;Name=WP_000884627.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=C9E94_RS09160;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_000884627.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	10284	10754	.	-	.	ID=gene-C9E94_RS09165;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=C9E94_RS09165;old_locus_tag=C9E94_09370
NZ_PYJR01000071.1	Protein Homology	CDS	10284	10754	.	-	0	ID=cds-WP_000354626.1;Parent=gene-C9E94_RS09165;Dbxref=GenBank:WP_000354626.1;Name=WP_000354626.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462289.1;locus_tag=C9E94_RS09165;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354626.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	11153	11746	.	-	.	ID=gene-C9E94_RS09170;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=C9E94_RS09170;old_locus_tag=C9E94_09375
NZ_PYJR01000071.1	Protein Homology	CDS	11153	11746	.	-	0	ID=cds-WP_135400956.1;Parent=gene-C9E94_RS09170;Dbxref=GenBank:WP_135400956.1;Name=WP_135400956.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462288.1;locus_tag=C9E94_RS09170;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_135400956.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	11747	12751	.	-	.	ID=gene-C9E94_RS09175;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=C9E94_RS09175;old_locus_tag=C9E94_09380
NZ_PYJR01000071.1	Protein Homology	CDS	11747	12751	.	-	0	ID=cds-WP_000723876.1;Parent=gene-C9E94_RS09175;Dbxref=GenBank:WP_000723876.1;Name=WP_000723876.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462287.1;locus_tag=C9E94_RS09175;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_000723876.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	12864	13838	.	-	.	ID=gene-C9E94_RS09180;Name=acuI;gbkey=Gene;gene=acuI;gene_biotype=protein_coding;locus_tag=C9E94_RS09180;old_locus_tag=C9E94_09385
NZ_PYJR01000071.1	Protein Homology	CDS	12864	13838	.	-	0	ID=cds-WP_001148240.1;Parent=gene-C9E94_RS09180;Dbxref=GenBank:WP_001148240.1;Name=WP_001148240.1;gbkey=CDS;gene=acuI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462286.1;locus_tag=C9E94_RS09180;product=acrylyl-CoA reductase (NADPH);protein_id=WP_001148240.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	14042	15982	.	+	.	ID=gene-C9E94_RS09185;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=C9E94_RS09185;old_locus_tag=C9E94_09390
NZ_PYJR01000071.1	Protein Homology	CDS	14042	15982	.	+	0	ID=cds-WP_001241381.1;Parent=gene-C9E94_RS09185;Dbxref=GenBank:WP_001241381.1;Name=WP_001241381.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462285.1;locus_tag=C9E94_RS09185;product=RNase E specificity factor CsrD;protein_id=WP_001241381.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	16290	17333	.	+	.	ID=gene-C9E94_RS09195;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=C9E94_RS09195;old_locus_tag=C9E94_09405
NZ_PYJR01000071.1	Protein Homology	CDS	16290	17333	.	+	0	ID=cds-WP_000913396.1;Parent=gene-C9E94_RS09195;Dbxref=GenBank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=C9E94_RS09195;product=rod shape-determining protein MreB;protein_id=WP_000913396.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	17398	18450	.	+	.	ID=gene-C9E94_RS09200;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=C9E94_RS09200;old_locus_tag=C9E94_09410
NZ_PYJR01000071.1	Protein Homology	CDS	17398	18450	.	+	0	ID=cds-WP_000802538.1;Parent=gene-C9E94_RS09200;Dbxref=GenBank:WP_000802538.1;Name=WP_000802538.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462283.1;locus_tag=C9E94_RS09200;product=rod shape-determining protein MreC;protein_id=WP_000802538.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	18453	18941	.	+	.	ID=gene-C9E94_RS09205;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=C9E94_RS09205;old_locus_tag=C9E94_09415
NZ_PYJR01000071.1	Protein Homology	CDS	18453	18941	.	+	0	ID=cds-WP_000179403.1;Parent=gene-C9E94_RS09205;Dbxref=GenBank:WP_000179403.1;Name=WP_000179403.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=C9E94_RS09205;product=rod shape-determining protein MreD;protein_id=WP_000179403.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	18950	19543	.	+	.	ID=gene-C9E94_RS09210;Name=C9E94_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09210;old_locus_tag=C9E94_09420
NZ_PYJR01000071.1	Protein Homology	CDS	18950	19543	.	+	0	ID=cds-WP_000210303.1;Parent=gene-C9E94_RS09210;Dbxref=GenBank:WP_000210303.1;Name=WP_000210303.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462281.1;locus_tag=C9E94_RS09210;product=Maf family protein;protein_id=WP_000210303.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	19533	21002	.	+	.	ID=gene-C9E94_RS09215;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=C9E94_RS09215;old_locus_tag=C9E94_09425
NZ_PYJR01000071.1	Protein Homology	CDS	19533	21002	.	+	0	ID=cds-WP_000123188.1;Parent=gene-C9E94_RS09215;Dbxref=GenBank:WP_000123188.1;Name=WP_000123188.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=C9E94_RS09215;product=ribonuclease G;protein_id=WP_000123188.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	21113	24913	.	+	.	ID=gene-C9E94_RS09220;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=C9E94_RS09220;old_locus_tag=C9E94_09430
NZ_PYJR01000071.1	Protein Homology	CDS	21113	24913	.	+	0	ID=cds-WP_001253499.1;Parent=gene-C9E94_RS09220;Dbxref=GenBank:WP_001253499.1;Name=WP_001253499.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462279.1;locus_tag=C9E94_RS09220;product=AsmA2 domain-containing protein YhdP;protein_id=WP_001253499.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	25058	26503	.	+	.	ID=gene-C9E94_RS09225;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=C9E94_RS09225;old_locus_tag=C9E94_09435
NZ_PYJR01000071.1	Protein Homology	CDS	25058	26503	.	+	0	ID=cds-WP_000055940.1;Parent=gene-C9E94_RS09225;Dbxref=GenBank:WP_000055940.1;Name=WP_000055940.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=C9E94_RS09225;product=metalloprotease TldD;protein_id=WP_000055940.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	26626	27555	.	-	.	ID=gene-C9E94_RS09230;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=C9E94_RS09230;old_locus_tag=C9E94_09440
NZ_PYJR01000071.1	Protein Homology	CDS	26626	27555	.	-	0	ID=cds-WP_000440300.1;Parent=gene-C9E94_RS09230;Dbxref=GenBank:WP_000440300.1;Name=WP_000440300.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462277.1;locus_tag=C9E94_RS09230;product=HTH-type transcriptional activator AaeR;protein_id=WP_000440300.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	27737	27940	.	+	.	ID=gene-C9E94_RS09235;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=C9E94_RS09235;old_locus_tag=C9E94_09445
NZ_PYJR01000071.1	Protein Homology	CDS	27737	27940	.	+	0	ID=cds-WP_000051840.1;Parent=gene-C9E94_RS09235;Dbxref=GenBank:WP_000051840.1;Name=WP_000051840.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=C9E94_RS09235;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_000051840.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	27948	28880	.	+	.	ID=gene-C9E94_RS09240;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=C9E94_RS09240;old_locus_tag=C9E94_09450
NZ_PYJR01000071.1	Protein Homology	CDS	27948	28880	.	+	0	ID=cds-WP_135400957.1;Parent=gene-C9E94_RS09240;Dbxref=GenBank:WP_135400957.1;Name=WP_135400957.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462275.1;locus_tag=C9E94_RS09240;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_135400957.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	28886	30853	.	+	.	ID=gene-C9E94_RS09245;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=C9E94_RS09245;old_locus_tag=C9E94_09455
NZ_PYJR01000071.1	Protein Homology	CDS	28886	30853	.	+	0	ID=cds-WP_000510913.1;Parent=gene-C9E94_RS09245;Dbxref=GenBank:WP_000510913.1;Name=WP_000510913.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462274.1;locus_tag=C9E94_RS09245;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_000510913.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	31025	31297	.	+	.	ID=gene-C9E94_RS09250;Name=C9E94_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09250;old_locus_tag=C9E94_09460
NZ_PYJR01000071.1	Protein Homology	CDS	31025	31297	.	+	0	ID=cds-WP_001103887.1;Parent=gene-C9E94_RS09250;Dbxref=GenBank:WP_001103887.1;Name=WP_001103887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462273.1;locus_tag=C9E94_RS09250;product=barstar family protein;protein_id=WP_001103887.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	31357	31623	.	-	.	ID=gene-C9E94_RS09255;Name=yhcN-B;gbkey=Gene;gene=yhcN-B;gene_biotype=protein_coding;locus_tag=C9E94_RS09255;old_locus_tag=C9E94_09465
NZ_PYJR01000071.1	Protein Homology	CDS	31357	31623	.	-	0	ID=cds-WP_000853277.1;Parent=gene-C9E94_RS09255;Dbxref=GenBank:WP_000853277.1;Name=WP_000853277.1;gbkey=CDS;gene=yhcN-B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462272.1;locus_tag=C9E94_RS09255;product=DUF1471 family stress response protein YhcN-B;protein_id=WP_000853277.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	31727	31990	.	-	.	ID=gene-C9E94_RS09260;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=C9E94_RS09260;old_locus_tag=C9E94_09470
NZ_PYJR01000071.1	Protein Homology	CDS	31727	31990	.	-	0	ID=cds-WP_000695695.1;Parent=gene-C9E94_RS09260;Dbxref=GenBank:WP_000695695.1;Name=WP_000695695.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462271.1;locus_tag=C9E94_RS09260;product=peroxide/acid stress response protein YhcN;protein_id=WP_000695695.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	32355	32825	.	-	.	ID=gene-C9E94_RS09265;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=C9E94_RS09265;old_locus_tag=C9E94_09475
NZ_PYJR01000071.1	Protein Homology	CDS	32355	32825	.	-	0	ID=cds-WP_001257852.1;Parent=gene-C9E94_RS09265;Dbxref=GenBank:WP_001257852.1;Name=WP_001257852.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=C9E94_RS09265;product=transcriptional regulator ArgR;protein_id=WP_001257852.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	33240	34178	.	+	.	ID=gene-C9E94_RS09270;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=C9E94_RS09270;old_locus_tag=C9E94_09480
NZ_PYJR01000071.1	Protein Homology	CDS	33240	34178	.	+	0	ID=cds-WP_000861586.1;Parent=gene-C9E94_RS09270;Dbxref=GenBank:WP_000861586.1;Name=WP_000861586.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=C9E94_RS09270;product=malate dehydrogenase;protein_id=WP_000861586.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	34298	34927	.	+	.	ID=gene-C9E94_RS09275;Name=C9E94_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09275;old_locus_tag=C9E94_09485
NZ_PYJR01000071.1	Protein Homology	CDS	34298	34927	.	+	0	ID=cds-WP_000723776.1;Parent=gene-C9E94_RS09275;Dbxref=GenBank:WP_000723776.1;Name=WP_000723776.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462268.1;locus_tag=C9E94_RS09275;product=GntR family transcriptional regulator;protein_id=WP_000723776.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	34914	35579	.	+	.	ID=gene-C9E94_RS09280;Name=C9E94_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09280;old_locus_tag=C9E94_09490
NZ_PYJR01000071.1	Protein Homology	CDS	34914	35579	.	+	0	ID=cds-WP_001171581.1;Parent=gene-C9E94_RS09280;Dbxref=GenBank:WP_001171581.1;Name=WP_001171581.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462267.1;locus_tag=C9E94_RS09280;product=GntR family transcriptional regulator;protein_id=WP_001171581.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	35790	37058	.	+	.	ID=gene-C9E94_RS09285;Name=C9E94_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09285;old_locus_tag=C9E94_09495
NZ_PYJR01000071.1	Protein Homology	CDS	35790	37058	.	+	0	ID=cds-WP_000433394.1;Parent=gene-C9E94_RS09285;Dbxref=GenBank:WP_000433394.1;Name=WP_000433394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462266.1;locus_tag=C9E94_RS09285;product=SLC13 family permease;protein_id=WP_000433394.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	37091	37990	.	+	.	ID=gene-C9E94_RS09290;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=C9E94_RS09290;old_locus_tag=C9E94_09500
NZ_PYJR01000071.1	Protein Homology	CDS	37091	37990	.	+	0	ID=cds-WP_000045349.1;Parent=gene-C9E94_RS09290;Dbxref=GenBank:WP_000045349.1;Name=WP_000045349.1;Ontology_term=GO:0008730;gbkey=CDS;gene=ttdA;go_function=L(+)-tartrate dehydratase activity|0008730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462265.1;locus_tag=C9E94_RS09290;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_000045349.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	37990	38607	.	+	.	ID=gene-C9E94_RS09295;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=C9E94_RS09295;old_locus_tag=C9E94_09505
NZ_PYJR01000071.1	Protein Homology	CDS	37990	38607	.	+	0	ID=cds-WP_000162404.1;Parent=gene-C9E94_RS09295;Dbxref=GenBank:WP_000162404.1;Name=WP_000162404.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462264.1;locus_tag=C9E94_RS09295;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_000162404.1;transl_table=11
NZ_PYJR01000071.1	RefSeq	gene	38764	38991	.	+	.	ID=gene-C9E94_RS09300;Name=C9E94_RS09300;end_range=38991,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09300;old_locus_tag=C9E94_09510;partial=true
NZ_PYJR01000071.1	Protein Homology	CDS	38764	38991	.	+	0	ID=cds-WP_038390563.1;Parent=gene-C9E94_RS09300;Dbxref=GenBank:WP_038390563.1;Name=WP_038390563.1;end_range=38991,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462263.1;locus_tag=C9E94_RS09300;partial=true;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_038390563.1;transl_table=11
##sequence-region NZ_PYJR01000066.1 1 38486
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000066.1	RefSeq	region	1	38486	.	+	.	ID=NZ_PYJR01000066.1:1..38486;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000066.1	RefSeq	pseudogene	452	805	.	+	.	ID=gene-C9E94_RS08855;Name=C9E94_RS08855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS08855;old_locus_tag=C9E94_09045;partial=true;pseudo=true;start_range=.,452
NZ_PYJR01000066.1	Protein Homology	CDS	452	805	.	+	0	ID=cds-C9E94_RS08855;Parent=gene-C9E94_RS08855;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524896.1;locus_tag=C9E94_RS08855;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,452;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	967	1164	.	+	.	ID=gene-C9E94_RS08860;Name=C9E94_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08860;old_locus_tag=C9E94_09050
NZ_PYJR01000066.1	Protein Homology	CDS	967	1164	.	+	0	ID=cds-WP_001117984.1;Parent=gene-C9E94_RS08860;Dbxref=GenBank:WP_001117984.1;Name=WP_001117984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111984.1;locus_tag=C9E94_RS08860;product=hypothetical protein;protein_id=WP_001117984.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	pseudogene	1358	2241	.	+	.	ID=gene-C9E94_RS08865;Name=C9E94_RS08865;end_range=2241,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS08865;old_locus_tag=C9E94_09055;partial=true;pseudo=true
NZ_PYJR01000066.1	Protein Homology	CDS	1358	2241	.	+	0	ID=cds-C9E94_RS08865;Parent=gene-C9E94_RS08865;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2241,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=C9E94_RS08865;partial=true;product=IS256 family transposase;pseudo=true;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	2224	2418	.	+	.	ID=gene-C9E94_RS23450;Name=C9E94_RS23450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23450
NZ_PYJR01000066.1	GeneMarkS-2+	CDS	2224	2418	.	+	0	ID=cds-WP_255123261.1;Parent=gene-C9E94_RS23450;Dbxref=GenBank:WP_255123261.1;Name=WP_255123261.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS23450;product=M23 family metallopeptidase;protein_id=WP_255123261.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	2438	2914	.	+	.	ID=gene-C9E94_RS08870;Name=C9E94_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08870;old_locus_tag=C9E94_09060
NZ_PYJR01000066.1	Protein Homology	CDS	2438	2914	.	+	0	ID=cds-WP_135400946.1;Parent=gene-C9E94_RS08870;Dbxref=GenBank:WP_135400946.1;Name=WP_135400946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747668.1;locus_tag=C9E94_RS08870;product=adhesin;protein_id=WP_135400946.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	2999	3379	.	+	.	ID=gene-C9E94_RS23360;Name=C9E94_RS23360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23360
NZ_PYJR01000066.1	GeneMarkS-2+	CDS	2999	3379	.	+	0	ID=cds-WP_167853646.1;Parent=gene-C9E94_RS23360;Dbxref=GenBank:WP_167853646.1;Name=WP_167853646.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS23360;product=hypothetical protein;protein_id=WP_167853646.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	3410	5686	.	-	.	ID=gene-C9E94_RS08880;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=C9E94_RS08880;old_locus_tag=C9E94_09070
NZ_PYJR01000066.1	Protein Homology	CDS	3410	5686	.	-	0	ID=cds-WP_000934064.1;Parent=gene-C9E94_RS08880;Dbxref=GenBank:WP_000934064.1;Name=WP_000934064.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459922.1;locus_tag=C9E94_RS08880;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_000934064.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	5717	6037	.	-	.	ID=gene-C9E94_RS08885;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=C9E94_RS08885;old_locus_tag=C9E94_09075
NZ_PYJR01000066.1	Protein Homology	CDS	5717	6037	.	-	0	ID=cds-WP_000520789.1;Parent=gene-C9E94_RS08885;Dbxref=GenBank:WP_000520789.1;Name=WP_000520789.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=C9E94_RS08885;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_000520789.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	6133	6210	.	-	.	ID=gene-C9E94_RS23455;Name=C9E94_RS23455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23455
NZ_PYJR01000066.1	Protein Homology	CDS	6133	6210	.	-	0	ID=cds-WP_212742690.1;Parent=gene-C9E94_RS23455;Dbxref=GenBank:WP_212742690.1;Name=WP_212742690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=C9E94_RS23455;product=hypothetical protein;protein_id=WP_212742690.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	6361	6582	.	+	.	ID=gene-C9E94_RS08890;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=C9E94_RS08890;old_locus_tag=C9E94_09080
NZ_PYJR01000066.1	Protein Homology	CDS	6361	6582	.	+	0	ID=cds-WP_000447499.1;Parent=gene-C9E94_RS08890;Dbxref=GenBank:WP_000447499.1;Name=WP_000447499.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459920.1;locus_tag=C9E94_RS08890;product=cold shock-like protein CspD;protein_id=WP_000447499.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	6712	8658	.	-	.	ID=gene-C9E94_RS08895;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=C9E94_RS08895;old_locus_tag=C9E94_09090
NZ_PYJR01000066.1	Protein Homology	CDS	6712	8658	.	-	0	ID=cds-WP_000125894.1;Parent=gene-C9E94_RS08895;Dbxref=GenBank:WP_000125894.1;Name=WP_000125894.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459919.1;locus_tag=C9E94_RS08895;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_000125894.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	8655	9773	.	-	.	ID=gene-C9E94_RS08900;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=C9E94_RS08900;old_locus_tag=C9E94_09095
NZ_PYJR01000066.1	Protein Homology	CDS	8655	9773	.	-	0	ID=cds-WP_001201754.1;Parent=gene-C9E94_RS08900;Dbxref=GenBank:WP_001201754.1;Name=WP_001201754.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459918.1;locus_tag=C9E94_RS08900;product=macrolide transporter subunit MacA;protein_id=WP_001201754.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	9919	10869	.	+	.	ID=gene-C9E94_RS08905;Name=C9E94_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08905;old_locus_tag=C9E94_09100
NZ_PYJR01000066.1	Protein Homology	CDS	9919	10869	.	+	0	ID=cds-WP_001519667.1;Parent=gene-C9E94_RS08905;Dbxref=GenBank:WP_001519667.1;Name=WP_001519667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519667.1;locus_tag=C9E94_RS08905;product=VirK/YbjX family protein;protein_id=WP_001519667.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	10866	12524	.	-	.	ID=gene-C9E94_RS08910;Name=C9E94_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08910;old_locus_tag=C9E94_09105
NZ_PYJR01000066.1	Protein Homology	CDS	10866	12524	.	-	0	ID=cds-WP_000599765.1;Parent=gene-C9E94_RS08910;Dbxref=GenBank:WP_000599765.1;Name=WP_000599765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459916.2;locus_tag=C9E94_RS08910;product=ATP-dependent endonuclease;protein_id=WP_000599765.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	12726	13625	.	+	.	ID=gene-C9E94_RS08915;Name=C9E94_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08915;old_locus_tag=C9E94_09115
NZ_PYJR01000066.1	Protein Homology	CDS	12726	13625	.	+	0	ID=cds-WP_000491118.1;Parent=gene-C9E94_RS08915;Dbxref=GenBank:WP_000491118.1;Name=WP_000491118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459915.1;locus_tag=C9E94_RS08915;product=lysine exporter LysO family protein;protein_id=WP_000491118.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	13769	15421	.	+	.	ID=gene-C9E94_RS08920;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=C9E94_RS08920;old_locus_tag=C9E94_09120
NZ_PYJR01000066.1	Protein Homology	CDS	13769	15421	.	+	0	ID=cds-WP_135400947.1;Parent=gene-C9E94_RS08920;Dbxref=GenBank:WP_135400947.1;Name=WP_135400947.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=C9E94_RS08920;product=hydroxylamine reductase;protein_id=WP_135400947.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	15433	16401	.	+	.	ID=gene-C9E94_RS08925;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=C9E94_RS08925;old_locus_tag=C9E94_09125
NZ_PYJR01000066.1	Protein Homology	CDS	15433	16401	.	+	0	ID=cds-WP_000178698.1;Parent=gene-C9E94_RS08925;Dbxref=GenBank:WP_000178698.1;Name=WP_000178698.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308985.1;locus_tag=C9E94_RS08925;product=NADH oxidoreductase;protein_id=WP_000178698.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	16559	18277	.	+	.	ID=gene-C9E94_RS08930;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=C9E94_RS08930;old_locus_tag=C9E94_09130
NZ_PYJR01000066.1	Protein Homology	CDS	16559	18277	.	+	0	ID=cds-WP_000815324.1;Parent=gene-C9E94_RS08930;Dbxref=GenBank:WP_000815324.1;Name=WP_000815324.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459912.1;locus_tag=C9E94_RS08930;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_000815324.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	18316	19317	.	+	.	ID=gene-C9E94_RS08935;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=C9E94_RS08935;old_locus_tag=C9E94_09135
NZ_PYJR01000066.1	Protein Homology	CDS	18316	19317	.	+	0	ID=cds-WP_000566346.1;Parent=gene-C9E94_RS08935;Dbxref=GenBank:WP_000566346.1;Name=WP_000566346.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459911.1;locus_tag=C9E94_RS08935;product=low-specificity L-threonine aldolase;protein_id=WP_000566346.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	19328	20761	.	+	.	ID=gene-C9E94_RS08940;Name=C9E94_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08940;old_locus_tag=C9E94_09140
NZ_PYJR01000066.1	Protein Homology	CDS	19328	20761	.	+	0	ID=cds-WP_135400948.1;Parent=gene-C9E94_RS08940;Dbxref=GenBank:WP_135400948.1;Name=WP_135400948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459910.1;locus_tag=C9E94_RS08940;product=SDR family oxidoreductase;protein_id=WP_135400948.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	20857	21870	.	+	.	ID=gene-C9E94_RS08945;Name=C9E94_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08945;old_locus_tag=C9E94_09145
NZ_PYJR01000066.1	Protein Homology	CDS	20857	21870	.	+	0	ID=cds-WP_052935863.1;Parent=gene-C9E94_RS08945;Dbxref=GenBank:WP_052935863.1;Name=WP_052935863.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459909.1;locus_tag=C9E94_RS08945;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_052935863.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	21867	22697	.	-	.	ID=gene-C9E94_RS08950;Name=C9E94_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08950;old_locus_tag=C9E94_09150
NZ_PYJR01000066.1	Protein Homology	CDS	21867	22697	.	-	0	ID=cds-WP_001202293.1;Parent=gene-C9E94_RS08950;Dbxref=GenBank:WP_001202293.1;Name=WP_001202293.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745,GO:0042834,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459908.1;locus_tag=C9E94_RS08950;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_001202293.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	22694	23017	.	-	.	ID=gene-C9E94_RS08955;Name=C9E94_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08955;old_locus_tag=C9E94_09155
NZ_PYJR01000066.1	Protein Homology	CDS	22694	23017	.	-	0	ID=cds-WP_001160725.1;Parent=gene-C9E94_RS08955;Dbxref=GenBank:WP_001160725.1;Name=WP_001160725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=C9E94_RS08955;product=heavy metal-binding domain-containing protein;protein_id=WP_001160725.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	23145	23660	.	+	.	ID=gene-C9E94_RS08960;Name=C9E94_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08960;old_locus_tag=C9E94_09160
NZ_PYJR01000066.1	Protein Homology	CDS	23145	23660	.	+	0	ID=cds-WP_001270724.1;Parent=gene-C9E94_RS08960;Dbxref=GenBank:WP_001270724.1;Name=WP_001270724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459868.1;locus_tag=C9E94_RS08960;product=lipoprotein;protein_id=WP_001270724.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	23890	24618	.	+	.	ID=gene-C9E94_RS08965;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=C9E94_RS08965;old_locus_tag=C9E94_09165
NZ_PYJR01000066.1	Protein Homology	CDS	23890	24618	.	+	0	ID=cds-WP_000027186.1;Parent=gene-C9E94_RS08965;Dbxref=GenBank:WP_000027186.1;Name=WP_000027186.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=C9E94_RS08965;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_000027186.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	24636	25367	.	+	.	ID=gene-C9E94_RS08970;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=C9E94_RS08970;old_locus_tag=C9E94_09170
NZ_PYJR01000066.1	Protein Homology	CDS	24636	25367	.	+	0	ID=cds-WP_000756586.1;Parent=gene-C9E94_RS08970;Dbxref=GenBank:WP_000756586.1;Name=WP_000756586.1;Ontology_term=GO:0015424,GO:0043190;gbkey=CDS;gene=artI;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type amino acid transporter activity|0015424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459866.1;locus_tag=C9E94_RS08970;product=arginine ABC transporter substrate-binding protein ArtI;protein_id=WP_000756586.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	25374	26090	.	+	.	ID=gene-C9E94_RS08975;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=C9E94_RS08975;old_locus_tag=C9E94_09175
NZ_PYJR01000066.1	Protein Homology	CDS	25374	26090	.	+	0	ID=cds-WP_001001677.1;Parent=gene-C9E94_RS08975;Dbxref=GenBank:WP_001001677.1;Name=WP_001001677.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459865.1;locus_tag=C9E94_RS08975;product=arginine ABC transporter permease ArtQ;protein_id=WP_001001677.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	26090	26758	.	+	.	ID=gene-C9E94_RS08980;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=C9E94_RS08980;old_locus_tag=C9E94_09180
NZ_PYJR01000066.1	Protein Homology	CDS	26090	26758	.	+	0	ID=cds-WP_000895396.1;Parent=gene-C9E94_RS08980;Dbxref=GenBank:WP_000895396.1;Name=WP_000895396.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459864.1;locus_tag=C9E94_RS08980;product=arginine ABC transporter permease ArtM;protein_id=WP_000895396.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	26995	27726	.	+	.	ID=gene-C9E94_RS08985;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=C9E94_RS08985;old_locus_tag=C9E94_09185
NZ_PYJR01000066.1	Protein Homology	CDS	26995	27726	.	+	0	ID=cds-WP_000737538.1;Parent=gene-C9E94_RS08985;Dbxref=GenBank:WP_000737538.1;Name=WP_000737538.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459863.1;locus_tag=C9E94_RS08985;product=arginine ABC transporter substrate-binding protein ArtJ;protein_id=WP_000737538.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	27945	29432	.	-	.	ID=gene-C9E94_RS08990;Name=C9E94_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08990;old_locus_tag=C9E94_09195
NZ_PYJR01000066.1	Protein Homology	CDS	27945	29432	.	-	0	ID=cds-WP_024798102.1;Parent=gene-C9E94_RS08990;Dbxref=GenBank:WP_024798102.1;Name=WP_024798102.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459862.1;locus_tag=C9E94_RS08990;product=sulfatase;protein_id=WP_024798102.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	29442	29762	.	-	.	ID=gene-C9E94_RS08995;Name=C9E94_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08995;old_locus_tag=C9E94_09200
NZ_PYJR01000066.1	Protein Homology	CDS	29442	29762	.	-	0	ID=cds-WP_000655399.1;Parent=gene-C9E94_RS08995;Dbxref=GenBank:WP_000655399.1;Name=WP_000655399.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459861.1;locus_tag=C9E94_RS08995;product=PTS sugar transporter subunit IIB;protein_id=WP_000655399.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	29792	31135	.	-	.	ID=gene-C9E94_RS09000;Name=C9E94_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09000;old_locus_tag=C9E94_09205
NZ_PYJR01000066.1	Protein Homology	CDS	29792	31135	.	-	0	ID=cds-WP_000399323.1;Parent=gene-C9E94_RS09000;Dbxref=GenBank:WP_000399323.1;Name=WP_000399323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459860.1;locus_tag=C9E94_RS09000;product=PTS sugar transporter subunit IIC;protein_id=WP_000399323.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	31430	32557	.	-	.	ID=gene-C9E94_RS09005;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=C9E94_RS09005;old_locus_tag=C9E94_09210
NZ_PYJR01000066.1	Protein Homology	CDS	31430	32557	.	-	0	ID=cds-WP_023243576.1;Parent=gene-C9E94_RS09005;Dbxref=GenBank:WP_023243576.1;Name=WP_023243576.1;Ontology_term=GO:0000154,GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA,RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149796.1;locus_tag=C9E94_RS09005;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_023243576.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	32600	33073	.	-	.	ID=gene-C9E94_RS09010;Name=C9E94_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09010;old_locus_tag=C9E94_09215
NZ_PYJR01000066.1	Protein Homology	CDS	32600	33073	.	-	0	ID=cds-WP_135400949.1;Parent=gene-C9E94_RS09010;Dbxref=GenBank:WP_135400949.1;Name=WP_135400949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459858.1;locus_tag=C9E94_RS09010;product=YbjO family protein;protein_id=WP_135400949.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	33147	33992	.	-	.	ID=gene-C9E94_RS09015;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=C9E94_RS09015;old_locus_tag=C9E94_09220
NZ_PYJR01000066.1	Protein Homology	CDS	33147	33992	.	-	0	ID=cds-WP_001061623.1;Parent=gene-C9E94_RS09015;Dbxref=GenBank:WP_001061623.1;Name=WP_001061623.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459857.1;locus_tag=C9E94_RS09015;product=putrescine ABC transporter permease PotI;protein_id=WP_001061623.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	33989	34942	.	-	.	ID=gene-C9E94_RS09020;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=C9E94_RS09020;old_locus_tag=C9E94_09225
NZ_PYJR01000066.1	Protein Homology	CDS	33989	34942	.	-	0	ID=cds-WP_000105453.1;Parent=gene-C9E94_RS09020;Dbxref=GenBank:WP_000105453.1;Name=WP_000105453.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459856.1;locus_tag=C9E94_RS09020;product=putrescine ABC transporter permease PotH;protein_id=WP_000105453.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	34952	36085	.	-	.	ID=gene-C9E94_RS09025;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=C9E94_RS09025;old_locus_tag=C9E94_09230
NZ_PYJR01000066.1	Protein Homology	CDS	34952	36085	.	-	0	ID=cds-WP_001000698.1;Parent=gene-C9E94_RS09025;Dbxref=GenBank:WP_001000698.1;Name=WP_001000698.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=C9E94_RS09025;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_001000698.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	36173	37285	.	-	.	ID=gene-C9E94_RS09030;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=C9E94_RS09030;old_locus_tag=C9E94_09235
NZ_PYJR01000066.1	Protein Homology	CDS	36173	37285	.	-	0	ID=cds-WP_000125769.1;Parent=gene-C9E94_RS09030;Dbxref=GenBank:WP_000125769.1;Name=WP_000125769.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459854.1;locus_tag=C9E94_RS09030;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_000125769.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	gene	37634	38110	.	-	.	ID=gene-C9E94_RS09035;Name=C9E94_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09035;old_locus_tag=C9E94_09240
NZ_PYJR01000066.1	Protein Homology	CDS	37634	38110	.	-	0	ID=cds-WP_000624814.1;Parent=gene-C9E94_RS09035;Dbxref=GenBank:WP_000624814.1;Name=WP_000624814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459853.1;locus_tag=C9E94_RS09035;product=YbjN domain-containing protein;protein_id=WP_000624814.1;transl_table=11
NZ_PYJR01000066.1	RefSeq	pseudogene	38207	38486	.	-	.	ID=gene-C9E94_RS09040;Name=C9E94_RS09040;end_range=38486,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS09040;old_locus_tag=C9E94_09245;partial=true;pseudo=true
NZ_PYJR01000066.1	Protein Homology	CDS	38207	38486	.	-	1	ID=cds-C9E94_RS09040;Parent=gene-C9E94_RS09040;Note=responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=38486,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459852.1;locus_tag=C9E94_RS09040;partial=true;product=30S ribosomal protein S6--L-glutamate ligase;pseudo=true;transl_table=11
##sequence-region NZ_PYJR01000065.1 1 33301
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000065.1	RefSeq	region	1	33301	.	+	.	ID=NZ_PYJR01000065.1:1..33301;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000065.1	RefSeq	gene	1	5434	.	+	.	ID=gene-C9E94_RS08715;Name=bigA;gbkey=Gene;gene=bigA;gene_biotype=protein_coding;locus_tag=C9E94_RS08715;old_locus_tag=C9E94_08905;partial=true;start_range=.,1
NZ_PYJR01000065.1	Protein Homology	CDS	1	5434	.	+	1	ID=cds-WP_135400943.1;Parent=gene-C9E94_RS08715;Dbxref=GenBank:WP_135400943.1;Name=WP_135400943.1;gbkey=CDS;gene=bigA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001169920.1;locus_tag=C9E94_RS08715;partial=true;product=autotransporter adhesin BigA;protein_id=WP_135400943.1;start_range=.,1;transl_table=11
NZ_PYJR01000065.1	RefSeq	gene	5627	5797	.	+	.	ID=gene-C9E94_RS08720;Name=C9E94_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08720;old_locus_tag=C9E94_08910
NZ_PYJR01000065.1	Protein Homology	CDS	5627	5797	.	+	0	ID=cds-WP_000472323.1;Parent=gene-C9E94_RS08720;Dbxref=GenBank:WP_000472323.1;Name=WP_000472323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462383.1;locus_tag=C9E94_RS08720;product=YhfL family protein;protein_id=WP_000472323.1;transl_table=11
NZ_PYJR01000065.1	RefSeq	gene	5942	6946	.	-	.	ID=gene-C9E94_RS08725;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=C9E94_RS08725;old_locus_tag=C9E94_08915
NZ_PYJR01000065.1	Protein Homology	CDS	5942	6946	.	-	0	ID=cds-WP_000165562.1;Parent=gene-C9E94_RS08725;Dbxref=GenBank:WP_000165562.1;Name=WP_000165562.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462384.1;locus_tag=C9E94_RS08725;product=tryptophan--tRNA ligase;protein_id=WP_000165562.1;transl_table=11
NZ_PYJR01000065.1	RefSeq	gene	6939	7697	.	-	.	ID=gene-C9E94_RS08730;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=C9E94_RS08730;old_locus_tag=C9E94_08920
NZ_PYJR01000065.1	Protein Homology	CDS	6939	7697	.	-	0	ID=cds-WP_023993872.1;Parent=gene-C9E94_RS08730;Dbxref=GenBank:WP_023993872.1;Name=WP_023993872.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462385.1;locus_tag=C9E94_RS08730;product=phosphoglycolate phosphatase;protein_id=WP_023993872.1;transl_table=11
NZ_PYJR01000065.1	RefSeq	gene	7690	8367	.	-	.	ID=gene-C9E94_RS08735;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=C9E94_RS08735;old_locus_tag=C9E94_08925
NZ_PYJR01000065.1	Protein Homology	CDS	7690	8367	.	-	0	ID=cds-WP_000816286.1;Parent=gene-C9E94_RS08735;Dbxref=GenBank:WP_000816286.1;Name=WP_000816286.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462386.1;locus_tag=C9E94_RS08735;product=ribulose-phosphate 3-epimerase;protein_id=WP_000816286.1;transl_table=11
NZ_PYJR01000065.1	RefSeq	gene	8385	9221	.	-	.	ID=gene-C9E94_RS08740;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=C9E94_RS08740;old_locus_tag=C9E94_08930
NZ_PYJR01000065.1	Protein Homology	CDS	8385	9221	.	-	0	ID=cds-WP_000742132.1;Parent=gene-C9E94_RS08740;Dbxref=GenBank:WP_000742132.1;Name=WP_000742132.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462387.1;locus_tag=C9E94_RS08740;product=adenine-specific DNA-methyltransferase;protein_id=WP_000742132.1;transl_table=11
NZ_PYJR01000065.1	RefSeq	gene	9402	10679	.	-	.	ID=gene-C9E94_RS08745;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=C9E94_RS08745;old_locus_tag=C9E94_08935
NZ_PYJR01000065.1	Protein Homology	CDS	9402	10679	.	-	0	ID=cds-WP_000343142.1;Parent=gene-C9E94_RS08745;Dbxref=GenBank:WP_000343142.1;Name=WP_000343142.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462388.1;locus_tag=C9E94_RS08745;product=cell division protein DamX;protein_id=WP_000343142.1;transl_table=11
NZ_PYJR01000065.1	RefSeq	gene	10777	11865	.	-	.	ID=gene-C9E94_RS08750;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=C9E94_RS08750;old_locus_tag=C9E94_08940
NZ_PYJR01000065.1	Protein Homology	CDS	10777	11865	.	-	0	ID=cds-WP_000439820.1;Parent=gene-C9E94_RS08750;Dbxref=GenBank:WP_000439820.1;Name=WP_000439820.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462389.1;locus_tag=C9E94_RS08750;product=3-dehydroquinate synthase;protein_id=WP_000439820.1;transl_table=11
NZ_PYJR01000065.1	RefSeq	gene	11922	12443	.	-	.	ID=gene-C9E94_RS08755;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=C9E94_RS08755;old_locus_tag=C9E94_08945
NZ_PYJR01000065.1	Protein Homology	CDS	11922	12443	.	-	0	ID=cds-WP_000818621.1;Parent=gene-C9E94_RS08755;Dbxref=GenBank:WP_000818621.1;Name=WP_000818621.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=C9E94_RS08755;product=shikimate kinase AroK;protein_id=WP_000818621.1;transl_table=11
NZ_PYJR01000065.1	RefSeq	gene	12908	14146	.	-	.	ID=gene-C9E94_RS08765;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=C9E94_RS08765;old_locus_tag=C9E94_08955
NZ_PYJR01000065.1	Protein Homology	CDS	12908	14146	.	-	0	ID=cds-WP_000832803.1;Parent=gene-C9E94_RS08765;Dbxref=GenBank:WP_000832803.1;Name=WP_000832803.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462391.1;locus_tag=C9E94_RS08765;product=DNA uptake porin HofQ;protein_id=WP_000832803.1;transl_table=11
NZ_PYJR01000065.1	RefSeq	gene	14061	14462	.	-	.	ID=gene-C9E94_RS08770;Name=C9E94_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08770;old_locus_tag=C9E94_08960
NZ_PYJR01000065.1	Protein Homology	CDS	14061	14462	.	-	0	ID=cds-WP_000648115.1;Parent=gene-C9E94_RS08770;Dbxref=GenBank:WP_000648115.1;Name=WP_000648115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462392.1;locus_tag=C9E94_RS08770;product=HofP DNA utilization family protein;protein_id=WP_000648115.1;transl_table=11
NZ_PYJR01000065.1	RefSeq	gene	14452	14925	.	-	.	ID=gene-C9E94_RS08775;Name=C9E94_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08775;old_locus_tag=C9E94_08965
NZ_PYJR01000065.1	Protein Homology	CDS	14452	14925	.	-	0	ID=cds-WP_023181711.1;Parent=gene-C9E94_RS08775;Dbxref=GenBank:WP_023181711.1;Name=WP_023181711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462393.1;locus_tag=C9E94_RS08775;product=HofO family protein;protein_id=WP_023181711.1;transl_table=11
NZ_PYJR01000065.1	RefSeq	gene	14909	15448	.	-	.	ID=gene-C9E94_RS08780;Name=C9E94_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08780;old_locus_tag=C9E94_08970
NZ_PYJR01000065.1	Protein Homology	CDS	14909	15448	.	-	0	ID=cds-WP_000951390.1;Parent=gene-C9E94_RS08780;Dbxref=GenBank:WP_000951390.1;Name=WP_000951390.1;Ontology_term=GO:0043107,GO:0043683;gbkey=CDS;go_process=type IV pilus-dependent motility|0043107||IEA,type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462394.1;locus_tag=C9E94_RS08780;product=PilN domain-containing protein;protein_id=WP_000951390.1;transl_table=11
NZ_PYJR01000065.1	RefSeq	gene	15448	16227	.	-	.	ID=gene-C9E94_RS08785;Name=C9E94_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08785;old_locus_tag=C9E94_08975
NZ_PYJR01000065.1	Protein Homology	CDS	15448	16227	.	-	0	ID=cds-WP_023993871.1;Parent=gene-C9E94_RS08785;Dbxref=GenBank:WP_023993871.1;Name=WP_023993871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462395.1;locus_tag=C9E94_RS08785;product=hypothetical protein;protein_id=WP_023993871.1;transl_table=11
NZ_PYJR01000065.1	RefSeq	gene	16348	18900	.	+	.	ID=gene-C9E94_RS08790;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=C9E94_RS08790;old_locus_tag=C9E94_08980
NZ_PYJR01000065.1	Protein Homology	CDS	16348	18900	.	+	0	ID=cds-WP_167853645.1;Parent=gene-C9E94_RS08790;Dbxref=GenBank:WP_167853645.1;Name=WP_167853645.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=C9E94_RS08790;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_167853645.1;transl_table=11
NZ_PYJR01000065.1	RefSeq	gene	18996	19559	.	-	.	ID=gene-C9E94_RS08795;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=C9E94_RS08795;old_locus_tag=C9E94_08985
NZ_PYJR01000065.1	Protein Homology	CDS	18996	19559	.	-	0	ID=cds-WP_000045725.1;Parent=gene-C9E94_RS08795;Dbxref=GenBank:WP_000045725.1;Name=WP_000045725.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000045725.1;locus_tag=C9E94_RS08795;product=ADP compounds hydrolase NudE;protein_id=WP_000045725.1;transl_table=11
NZ_PYJR01000065.1	RefSeq	gene	19882	22014	.	+	.	ID=gene-C9E94_RS08800;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=C9E94_RS08800;old_locus_tag=C9E94_08990
NZ_PYJR01000065.1	Protein Homology	CDS	19882	22014	.	+	0	ID=cds-WP_000104092.1;Parent=gene-C9E94_RS08800;Dbxref=GenBank:WP_000104092.1;Name=WP_000104092.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462398.1;locus_tag=C9E94_RS08800;product=intracellular growth attenuator protein IgaA;protein_id=WP_000104092.1;transl_table=11
NZ_PYJR01000065.1	RefSeq	gene	22079	22747	.	+	.	ID=gene-C9E94_RS08805;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=C9E94_RS08805;old_locus_tag=C9E94_08995
NZ_PYJR01000065.1	Protein Homology	CDS	22079	22747	.	+	0	ID=cds-WP_001520508.1;Parent=gene-C9E94_RS08805;Dbxref=GenBank:WP_001520508.1;Name=WP_001520508.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462399.1;locus_tag=C9E94_RS08805;product=GMP/IMP nucleotidase;protein_id=WP_001520508.1;transl_table=11
NZ_PYJR01000065.1	RefSeq	gene	22758	23159	.	+	.	ID=gene-C9E94_RS08810;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=C9E94_RS08810;old_locus_tag=C9E94_09000
NZ_PYJR01000065.1	Protein Homology	CDS	22758	23159	.	+	0	ID=cds-WP_000660719.1;Parent=gene-C9E94_RS08810;Dbxref=GenBank:WP_000660719.1;Name=WP_000660719.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462400.1;locus_tag=C9E94_RS08810;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_000660719.1;transl_table=11
NZ_PYJR01000065.1	RefSeq	gene	23184	24062	.	+	.	ID=gene-C9E94_RS08815;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=C9E94_RS08815;old_locus_tag=C9E94_09005
NZ_PYJR01000065.1	Protein Homology	CDS	23184	24062	.	+	0	ID=cds-WP_001748865.1;Parent=gene-C9E94_RS08815;Dbxref=GenBank:WP_001748865.1;Name=WP_001748865.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=C9E94_RS08815;product=Hsp33 family molecular chaperone HslO;protein_id=WP_001748865.1;transl_table=11
NZ_PYJR01000065.1	RefSeq	gene	24173	25882	.	-	.	ID=gene-C9E94_RS08820;Name=C9E94_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08820;old_locus_tag=C9E94_09010
NZ_PYJR01000065.1	Protein Homology	CDS	24173	25882	.	-	0	ID=cds-WP_135400944.1;Parent=gene-C9E94_RS08820;Dbxref=GenBank:WP_135400944.1;Name=WP_135400944.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462402.1;locus_tag=C9E94_RS08820;product=DUF4153 domain-containing protein;protein_id=WP_135400944.1;transl_table=11
NZ_PYJR01000065.1	RefSeq	gene	26262	27881	.	+	.	ID=gene-C9E94_RS08825;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=C9E94_RS08825;old_locus_tag=C9E94_09015
NZ_PYJR01000065.1	Protein Homology	CDS	26262	27881	.	+	0	ID=cds-WP_001265689.1;Parent=gene-C9E94_RS08825;Dbxref=GenBank:WP_001265689.1;Name=WP_001265689.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462403.2;locus_tag=C9E94_RS08825;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_001265689.1;transl_table=11
NZ_PYJR01000065.1	RefSeq	gene	27956	29308	.	-	.	ID=gene-C9E94_RS08830;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=C9E94_RS08830;old_locus_tag=C9E94_09020
NZ_PYJR01000065.1	Protein Homology	CDS	27956	29308	.	-	0	ID=cds-WP_001253818.1;Parent=gene-C9E94_RS08830;Dbxref=GenBank:WP_001253818.1;Name=WP_001253818.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462404.1;locus_tag=C9E94_RS08830;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_001253818.1;transl_table=11
NZ_PYJR01000065.1	RefSeq	gene	29305	30024	.	-	.	ID=gene-C9E94_RS08835;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=C9E94_RS08835;old_locus_tag=C9E94_09025
NZ_PYJR01000065.1	Protein Homology	CDS	29305	30024	.	-	0	ID=cds-WP_001157751.1;Parent=gene-C9E94_RS08835;Dbxref=GenBank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007374840.1;locus_tag=C9E94_RS08835;product=osmolarity response regulator transcription factor OmpR;protein_id=WP_001157751.1;transl_table=11
NZ_PYJR01000065.1	RefSeq	gene	30250	30723	.	+	.	ID=gene-C9E94_RS08840;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=C9E94_RS08840;old_locus_tag=C9E94_09030
NZ_PYJR01000065.1	Protein Homology	CDS	30250	30723	.	+	0	ID=cds-WP_000856695.1;Parent=gene-C9E94_RS08840;Dbxref=GenBank:WP_000856695.1;Name=WP_000856695.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=C9E94_RS08840;product=transcription elongation factor GreB;protein_id=WP_000856695.1;transl_table=11
NZ_PYJR01000065.1	RefSeq	gene	30822	33152	.	+	.	ID=gene-C9E94_RS08845;Name=C9E94_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS08845;old_locus_tag=C9E94_09035
NZ_PYJR01000065.1	Protein Homology	CDS	30822	33152	.	+	0	ID=cds-WP_000980659.1;Parent=gene-C9E94_RS08845;Dbxref=GenBank:WP_000980659.1;Name=WP_000980659.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312276.2;locus_tag=C9E94_RS08845;product=Tex family protein;protein_id=WP_000980659.1;transl_table=11
##sequence-region NZ_PYJR01000106.1 1 33012
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000106.1	RefSeq	region	1	33012	.	+	.	ID=NZ_PYJR01000106.1:1..33012;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000106.1	RefSeq	gene	296	643	.	+	.	ID=gene-C9E94_RS16110;Name=C9E94_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16110;old_locus_tag=C9E94_16490
NZ_PYJR01000106.1	Protein Homology	CDS	296	643	.	+	0	ID=cds-WP_000615248.1;Parent=gene-C9E94_RS16110;Dbxref=GenBank:WP_000615248.1;Name=WP_000615248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615246.1;locus_tag=C9E94_RS16110;product=Mor transcription activator family protein;protein_id=WP_000615248.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	774	2123	.	-	.	ID=gene-C9E94_RS16115;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=C9E94_RS16115;old_locus_tag=C9E94_16495
NZ_PYJR01000106.1	Protein Homology	CDS	774	2123	.	-	0	ID=cds-WP_000136400.1;Parent=gene-C9E94_RS16115;Dbxref=GenBank:WP_000136400.1;Name=WP_000136400.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463085.1;locus_tag=C9E94_RS16115;product=lysine-sensitive aspartokinase 3;protein_id=WP_000136400.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	2468	4117	.	+	.	ID=gene-C9E94_RS16120;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=C9E94_RS16120;old_locus_tag=C9E94_16500
NZ_PYJR01000106.1	Protein Homology	CDS	2468	4117	.	+	0	ID=cds-WP_000790028.1;Parent=gene-C9E94_RS16120;Dbxref=GenBank:WP_000790028.1;Name=WP_000790028.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463086.1;locus_tag=C9E94_RS16120;product=glucose-6-phosphate isomerase;protein_id=WP_000790028.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	4561	4803	.	+	.	ID=gene-C9E94_RS16125;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=C9E94_RS16125;old_locus_tag=C9E94_16505
NZ_PYJR01000106.1	Protein Homology	CDS	4561	4803	.	+	0	ID=cds-WP_001541297.1;Parent=gene-C9E94_RS16125;Dbxref=GenBank:WP_001541297.1;Name=WP_001541297.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=C9E94_RS16125;product=exopolysaccharide production protein YjbE;protein_id=WP_001541297.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	4867	5505	.	+	.	ID=gene-C9E94_RS16130;Name=C9E94_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16130;old_locus_tag=C9E94_16510
NZ_PYJR01000106.1	Protein Homology	CDS	4867	5505	.	+	0	ID=cds-WP_000824802.1;Parent=gene-C9E94_RS16130;Dbxref=GenBank:WP_000824802.1;Name=WP_000824802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824802.1;locus_tag=C9E94_RS16130;product=YjbF family lipoprotein;protein_id=WP_000824802.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	5502	6239	.	+	.	ID=gene-C9E94_RS16135;Name=C9E94_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16135;old_locus_tag=C9E94_16515
NZ_PYJR01000106.1	Protein Homology	CDS	5502	6239	.	+	0	ID=cds-WP_000977968.1;Parent=gene-C9E94_RS16135;Dbxref=GenBank:WP_000977968.1;Name=WP_000977968.1;Ontology_term=GO:0042603;gbkey=CDS;go_component=capsule|0042603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463089.1;locus_tag=C9E94_RS16135;product=capsule biosynthesis GfcC family protein;protein_id=WP_000977968.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	6239	8335	.	+	.	ID=gene-C9E94_RS16140;Name=C9E94_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16140;old_locus_tag=C9E94_16520
NZ_PYJR01000106.1	Protein Homology	CDS	6239	8335	.	+	0	ID=cds-WP_000750804.1;Parent=gene-C9E94_RS16140;Dbxref=GenBank:WP_000750804.1;Name=WP_000750804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463090.1;locus_tag=C9E94_RS16140;product=YjbH domain-containing protein;protein_id=WP_000750804.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	8478	8888	.	+	.	ID=gene-C9E94_RS16145;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=C9E94_RS16145;old_locus_tag=C9E94_16525
NZ_PYJR01000106.1	Protein Homology	CDS	8478	8888	.	+	0	ID=cds-WP_000982749.1;Parent=gene-C9E94_RS16145;Dbxref=GenBank:WP_000982749.1;Name=WP_000982749.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463091.1;locus_tag=C9E94_RS16145;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000982749.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	9054	9944	.	-	.	ID=gene-C9E94_RS16150;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=C9E94_RS16150;old_locus_tag=C9E94_16530
NZ_PYJR01000106.1	Protein Homology	CDS	9054	9944	.	-	0	ID=cds-WP_001252085.1;Parent=gene-C9E94_RS16150;Dbxref=GenBank:WP_001252085.1;Name=WP_001252085.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463092.1;locus_tag=C9E94_RS16150;product=maltose ABC transporter permease MalG;protein_id=WP_001252085.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	9959	11503	.	-	.	ID=gene-C9E94_RS16155;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=C9E94_RS16155;old_locus_tag=C9E94_16535
NZ_PYJR01000106.1	Protein Homology	CDS	9959	11503	.	-	0	ID=cds-WP_000382575.1;Parent=gene-C9E94_RS16155;Dbxref=GenBank:WP_000382575.1;Name=WP_000382575.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463093.1;locus_tag=C9E94_RS16155;product=maltose ABC transporter permease MalF;protein_id=WP_000382575.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	11635	12825	.	-	.	ID=gene-C9E94_RS16160;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=C9E94_RS16160;old_locus_tag=C9E94_16540
NZ_PYJR01000106.1	Protein Homology	CDS	11635	12825	.	-	0	ID=cds-WP_000695417.1;Parent=gene-C9E94_RS16160;Dbxref=GenBank:WP_000695417.1;Name=WP_000695417.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=C9E94_RS16160;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_000695417.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	13187	14296	.	+	.	ID=gene-C9E94_RS16165;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=C9E94_RS16165;old_locus_tag=C9E94_16545
NZ_PYJR01000106.1	Protein Homology	CDS	13187	14296	.	+	0	ID=cds-WP_000179176.1;Parent=gene-C9E94_RS16165;Dbxref=GenBank:WP_000179176.1;Name=WP_000179176.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=C9E94_RS16165;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_000179176.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	14385	15743	.	+	.	ID=gene-C9E94_RS16170;Name=C9E94_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16170;old_locus_tag=C9E94_16550
NZ_PYJR01000106.1	Protein Homology	CDS	14385	15743	.	+	0	ID=cds-WP_000973678.1;Parent=gene-C9E94_RS16170;Dbxref=GenBank:WP_000973678.1;Name=WP_000973678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463096.1;locus_tag=C9E94_RS16170;product=maltoporin;protein_id=WP_000973678.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	15907	16824	.	+	.	ID=gene-C9E94_RS16175;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=C9E94_RS16175;old_locus_tag=C9E94_16555
NZ_PYJR01000106.1	Protein Homology	CDS	15907	16824	.	+	0	ID=cds-WP_000782497.1;Parent=gene-C9E94_RS16175;Dbxref=GenBank:WP_000782497.1;Name=WP_000782497.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463097.1;locus_tag=C9E94_RS16175;product=maltose operon protein MalM;protein_id=WP_000782497.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	17005	17502	.	+	.	ID=gene-C9E94_RS16180;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=C9E94_RS16180;old_locus_tag=C9E94_16560
NZ_PYJR01000106.1	Protein Homology	CDS	17005	17502	.	+	0	ID=cds-WP_000019219.1;Parent=gene-C9E94_RS16180;Dbxref=GenBank:WP_000019219.1;Name=WP_000019219.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463098.1;locus_tag=C9E94_RS16180;product=chorismate lyase;protein_id=WP_000019219.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	17516	18388	.	+	.	ID=gene-C9E94_RS16185;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=C9E94_RS16185;old_locus_tag=C9E94_16565
NZ_PYJR01000106.1	Protein Homology	CDS	17516	18388	.	+	0	ID=cds-WP_000455249.1;Parent=gene-C9E94_RS16185;Dbxref=GenBank:WP_000455249.1;Name=WP_000455249.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463099.1;locus_tag=C9E94_RS16185;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_000455249.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	18487	20907	.	-	.	ID=gene-C9E94_RS16190;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=C9E94_RS16190;old_locus_tag=C9E94_16570
NZ_PYJR01000106.1	Protein Homology	CDS	18487	20907	.	-	0	ID=cds-WP_000017360.1;Parent=gene-C9E94_RS16190;Dbxref=GenBank:WP_000017360.1;Name=WP_000017360.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463100.1;locus_tag=C9E94_RS16190;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_000017360.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	21078	21446	.	+	.	ID=gene-C9E94_RS16195;Name=C9E94_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16195;old_locus_tag=C9E94_16575
NZ_PYJR01000106.1	Protein Homology	CDS	21078	21446	.	+	0	ID=cds-WP_000002902.1;Parent=gene-C9E94_RS16195;Dbxref=GenBank:WP_000002902.1;Name=WP_000002902.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463101.1;locus_tag=C9E94_RS16195;product=diacylglycerol kinase;protein_id=WP_000002902.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	21555	22163	.	+	.	ID=gene-C9E94_RS16200;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=C9E94_RS16200;old_locus_tag=C9E94_16580
NZ_PYJR01000106.1	Protein Homology	CDS	21555	22163	.	+	0	ID=cds-WP_000646079.1;Parent=gene-C9E94_RS16200;Dbxref=GenBank:WP_000646079.1;Name=WP_000646079.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=C9E94_RS16200;product=transcriptional repressor LexA;protein_id=WP_000646079.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	22342	23667	.	+	.	ID=gene-C9E94_RS16205;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=C9E94_RS16205;old_locus_tag=C9E94_16585
NZ_PYJR01000106.1	Protein Homology	CDS	22342	23667	.	+	0	ID=cds-WP_001128116.1;Parent=gene-C9E94_RS16205;Dbxref=GenBank:WP_001128116.1;Name=WP_001128116.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463103.1;locus_tag=C9E94_RS16205;product=MATE family efflux transporter DinF;protein_id=WP_001128116.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	23664	23777	.	+	.	ID=gene-C9E94_RS16210;Name=C9E94_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16210;old_locus_tag=C9E94_16590
NZ_PYJR01000106.1	Protein Homology	CDS	23664	23777	.	+	0	ID=cds-WP_010989093.1;Parent=gene-C9E94_RS16210;Dbxref=GenBank:WP_010989093.1;Name=WP_010989093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463104.1;locus_tag=C9E94_RS16210;product=hypothetical protein;protein_id=WP_010989093.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	23799	24008	.	+	.	ID=gene-C9E94_RS16215;Name=C9E94_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16215;old_locus_tag=C9E94_16595
NZ_PYJR01000106.1	Protein Homology	CDS	23799	24008	.	+	0	ID=cds-WP_001030592.1;Parent=gene-C9E94_RS16215;Dbxref=GenBank:WP_001030592.1;Name=WP_001030592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=C9E94_RS16215;product=CsbD family protein;protein_id=WP_001030592.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	24107	24622	.	-	.	ID=gene-C9E94_RS16220;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=C9E94_RS16220;old_locus_tag=C9E94_16600
NZ_PYJR01000106.1	Protein Homology	CDS	24107	24622	.	-	0	ID=cds-WP_000416271.1;Parent=gene-C9E94_RS16220;Dbxref=GenBank:WP_000416271.1;Name=WP_000416271.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463106.1;locus_tag=C9E94_RS16220;product=zinc uptake transcriptional repressor Zur;protein_id=WP_000416271.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	24869	26179	.	+	.	ID=gene-C9E94_RS16225;Name=C9E94_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16225;old_locus_tag=C9E94_16605
NZ_PYJR01000106.1	Protein Homology	CDS	24869	26179	.	+	0	ID=cds-WP_135401128.1;Parent=gene-C9E94_RS16225;Dbxref=GenBank:WP_135401128.1;Name=WP_135401128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463107.1;locus_tag=C9E94_RS16225;product=conjugal transfer protein TraF;protein_id=WP_135401128.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	26267	27265	.	+	.	ID=gene-C9E94_RS16230;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=C9E94_RS16230;old_locus_tag=C9E94_16610
NZ_PYJR01000106.1	Protein Homology	CDS	26267	27265	.	+	0	ID=cds-WP_135401129.1;Parent=gene-C9E94_RS16230;Dbxref=GenBank:WP_135401129.1;Name=WP_135401129.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463108.1;locus_tag=C9E94_RS16230;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_135401129.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	27433	27675	.	+	.	ID=gene-C9E94_RS16235;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=C9E94_RS16235;old_locus_tag=C9E94_16615
NZ_PYJR01000106.1	Protein Homology	CDS	27433	27675	.	+	0	ID=cds-WP_000891414.1;Parent=gene-C9E94_RS16235;Dbxref=GenBank:WP_000891414.1;Name=WP_000891414.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463109.1;locus_tag=C9E94_RS16235;product=envelope stress response protein PspG;protein_id=WP_000891414.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	27849	28832	.	-	.	ID=gene-C9E94_RS16240;Name=C9E94_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16240;old_locus_tag=C9E94_16620
NZ_PYJR01000106.1	Protein Homology	CDS	27849	28832	.	-	0	ID=cds-WP_000235555.1;Parent=gene-C9E94_RS16240;Dbxref=GenBank:WP_000235555.1;Name=WP_000235555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463110.1;locus_tag=C9E94_RS16240;product=quinone oxidoreductase;protein_id=WP_000235555.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	28897	30312	.	+	.	ID=gene-C9E94_RS16245;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=C9E94_RS16245;old_locus_tag=C9E94_16625
NZ_PYJR01000106.1	Protein Homology	CDS	28897	30312	.	+	0	ID=cds-WP_000918353.1;Parent=gene-C9E94_RS16245;Dbxref=GenBank:WP_000918353.1;Name=WP_000918353.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463111.1;locus_tag=C9E94_RS16245;product=replicative DNA helicase;protein_id=WP_000918353.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	30344	31423	.	+	.	ID=gene-C9E94_RS16250;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=C9E94_RS16250;old_locus_tag=C9E94_16630
NZ_PYJR01000106.1	Protein Homology	CDS	30344	31423	.	+	0	ID=cds-WP_001147297.1;Parent=gene-C9E94_RS16250;Dbxref=GenBank:WP_001147297.1;Name=WP_001147297.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463112.1;locus_tag=C9E94_RS16250;product=alanine racemase;protein_id=WP_001147297.1;transl_table=11
NZ_PYJR01000106.1	RefSeq	gene	31609	32802	.	+	.	ID=gene-C9E94_RS16255;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=C9E94_RS16255;old_locus_tag=C9E94_16635
NZ_PYJR01000106.1	Protein Homology	CDS	31609	32802	.	+	0	ID=cds-WP_000486914.1;Parent=gene-C9E94_RS16255;Dbxref=GenBank:WP_000486914.1;Name=WP_000486914.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463113.1;locus_tag=C9E94_RS16255;product=aromatic amino acid transaminase;protein_id=WP_000486914.1;transl_table=11
##sequence-region NZ_PYJR01000013.1 1 32862
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000013.1	RefSeq	region	1	32862	.	+	.	ID=NZ_PYJR01000013.1:1..32862;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000013.1	RefSeq	gene	204	1964	.	-	.	ID=gene-C9E94_RS01265;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=C9E94_RS01265;old_locus_tag=C9E94_01295
NZ_PYJR01000013.1	Protein Homology	CDS	204	1964	.	-	0	ID=cds-WP_135400746.1;Parent=gene-C9E94_RS01265;Dbxref=GenBank:WP_135400746.1;Name=WP_135400746.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=C9E94_RS01265;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_135400746.1;transl_table=11
NZ_PYJR01000013.1	RefSeq	gene	2101	2793	.	+	.	ID=gene-C9E94_RS01270;Name=C9E94_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01270;old_locus_tag=C9E94_01300
NZ_PYJR01000013.1	Protein Homology	CDS	2101	2793	.	+	0	ID=cds-WP_000642866.1;Parent=gene-C9E94_RS01270;Dbxref=GenBank:WP_000642866.1;Name=WP_000642866.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459951.1;locus_tag=C9E94_RS01270;product=DUF421 domain-containing protein;protein_id=WP_000642866.1;transl_table=11
NZ_PYJR01000013.1	RefSeq	gene	2979	4067	.	+	.	ID=gene-C9E94_RS01275;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=C9E94_RS01275;old_locus_tag=C9E94_01305
NZ_PYJR01000013.1	Protein Homology	CDS	2979	4067	.	+	0	ID=cds-WP_000079584.1;Parent=gene-C9E94_RS01275;Dbxref=GenBank:WP_000079584.1;Name=WP_000079584.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459952.1;locus_tag=C9E94_RS01275;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_000079584.1;transl_table=11
NZ_PYJR01000013.1	RefSeq	gene	4138	5421	.	+	.	ID=gene-C9E94_RS01280;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=C9E94_RS01280;old_locus_tag=C9E94_01310
NZ_PYJR01000013.1	Protein Homology	CDS	4138	5421	.	+	0	ID=cds-WP_000445184.1;Parent=gene-C9E94_RS01280;Dbxref=GenBank:WP_000445184.1;Name=WP_000445184.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459953.1;locus_tag=C9E94_RS01280;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_000445184.1;transl_table=11
NZ_PYJR01000013.1	RefSeq	gene	5564	6325	.	+	.	ID=gene-C9E94_RS01285;Name=C9E94_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01285;old_locus_tag=C9E94_01315
NZ_PYJR01000013.1	Protein Homology	CDS	5564	6325	.	+	0	ID=cds-WP_000792301.1;Parent=gene-C9E94_RS01285;Dbxref=GenBank:WP_000792301.1;Name=WP_000792301.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459954.1;locus_tag=C9E94_RS01285;product=M48 family metallopeptidase;protein_id=WP_000792301.1;transl_table=11
NZ_PYJR01000013.1	RefSeq	gene	6498	7181	.	+	.	ID=gene-C9E94_RS01290;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=C9E94_RS01290;old_locus_tag=C9E94_01320
NZ_PYJR01000013.1	Protein Homology	CDS	6498	7181	.	+	0	ID=cds-WP_000125007.1;Parent=gene-C9E94_RS01290;Dbxref=GenBank:WP_000125007.1;Name=WP_000125007.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=C9E94_RS01290;product=(d)CMP kinase;protein_id=WP_000125007.1;transl_table=11
NZ_PYJR01000013.1	RefSeq	gene	7295	8968	.	+	.	ID=gene-C9E94_RS01295;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=C9E94_RS01295;old_locus_tag=C9E94_01325
NZ_PYJR01000013.1	Protein Homology	CDS	7295	8968	.	+	0	ID=cds-WP_000140324.1;Parent=gene-C9E94_RS01295;Dbxref=GenBank:WP_000140324.1;Name=WP_000140324.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=C9E94_RS01295;product=30S ribosomal protein S1;protein_id=WP_000140324.1;transl_table=11
NZ_PYJR01000013.1	RefSeq	gene	9124	9408	.	+	.	ID=gene-C9E94_RS01300;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=C9E94_RS01300;old_locus_tag=C9E94_01330
NZ_PYJR01000013.1	Protein Homology	CDS	9124	9408	.	+	0	ID=cds-WP_000167332.1;Parent=gene-C9E94_RS01300;Dbxref=GenBank:WP_000167332.1;Name=WP_000167332.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=C9E94_RS01300;product=integration host factor subunit beta;protein_id=WP_000167332.1;transl_table=11
NZ_PYJR01000013.1	RefSeq	gene	9638	11902	.	+	.	ID=gene-C9E94_RS01305;Name=C9E94_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01305;old_locus_tag=C9E94_01335
NZ_PYJR01000013.1	Protein Homology	CDS	9638	11902	.	+	0	ID=cds-WP_135400747.1;Parent=gene-C9E94_RS01305;Dbxref=GenBank:WP_135400747.1;Name=WP_135400747.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459958.1;locus_tag=C9E94_RS01305;product=ComEC family protein;protein_id=WP_135400747.1;transl_table=11
NZ_PYJR01000013.1	RefSeq	gene	11939	13687	.	+	.	ID=gene-C9E94_RS01310;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=C9E94_RS01310;old_locus_tag=C9E94_01340
NZ_PYJR01000013.1	Protein Homology	CDS	11939	13687	.	+	0	ID=cds-WP_000551246.1;Parent=gene-C9E94_RS01310;Dbxref=GenBank:WP_000551246.1;Name=WP_000551246.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459959.1;locus_tag=C9E94_RS01310;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_000551246.1;transl_table=11
NZ_PYJR01000013.1	RefSeq	gene	13684	14661	.	+	.	ID=gene-C9E94_RS01315;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=C9E94_RS01315;old_locus_tag=C9E94_01345
NZ_PYJR01000013.1	Protein Homology	CDS	13684	14661	.	+	0	ID=cds-WP_071624384.1;Parent=gene-C9E94_RS01315;Dbxref=GenBank:WP_071624384.1;Name=WP_071624384.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=lipid-A 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459960.1;locus_tag=C9E94_RS01315;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_071624384.1;transl_table=11
NZ_PYJR01000013.1	RefSeq	gene	14705	15937	.	+	.	ID=gene-C9E94_RS01320;Name=C9E94_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01320;old_locus_tag=C9E94_01350
NZ_PYJR01000013.1	Protein Homology	CDS	14705	15937	.	+	0	ID=cds-WP_000056915.1;Parent=gene-C9E94_RS01320;Dbxref=GenBank:WP_000056915.1;Name=WP_000056915.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459961.1;locus_tag=C9E94_RS01320;product=winged helix-turn-helix domain-containing protein;protein_id=WP_000056915.1;transl_table=11
NZ_PYJR01000013.1	RefSeq	gene	15989	16171	.	+	.	ID=gene-C9E94_RS01325;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=C9E94_RS01325;old_locus_tag=C9E94_01355
NZ_PYJR01000013.1	Protein Homology	CDS	15989	16171	.	+	0	ID=cds-WP_000350061.1;Parent=gene-C9E94_RS01325;Dbxref=GenBank:WP_000350061.1;Name=WP_000350061.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459962.1;locus_tag=C9E94_RS01325;product=protein YcaR;protein_id=WP_000350061.1;transl_table=11
NZ_PYJR01000013.1	RefSeq	gene	16168	16914	.	+	.	ID=gene-C9E94_RS01330;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=C9E94_RS01330;old_locus_tag=C9E94_01360
NZ_PYJR01000013.1	Protein Homology	CDS	16168	16914	.	+	0	ID=cds-WP_000011576.1;Parent=gene-C9E94_RS01330;Dbxref=GenBank:WP_000011576.1;Name=WP_000011576.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459963.1;locus_tag=C9E94_RS01330;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_000011576.1;transl_table=11
NZ_PYJR01000013.1	RefSeq	gene	17125	18018	.	+	.	ID=gene-C9E94_RS01340;Name=C9E94_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01340;old_locus_tag=C9E94_01365
NZ_PYJR01000013.1	Protein Homology	CDS	17125	18018	.	+	0	ID=cds-WP_000436889.1;Parent=gene-C9E94_RS01340;Dbxref=GenBank:WP_000436889.1;Name=WP_000436889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459964.1;locus_tag=C9E94_RS01340;product=YcbJ family phosphotransferase;protein_id=WP_000436889.1;transl_table=11
NZ_PYJR01000013.1	RefSeq	gene	17998	18774	.	-	.	ID=gene-C9E94_RS01345;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=C9E94_RS01345;old_locus_tag=C9E94_01370
NZ_PYJR01000013.1	Protein Homology	CDS	17998	18774	.	-	0	ID=cds-WP_000899563.1;Parent=gene-C9E94_RS01345;Dbxref=GenBank:WP_000899563.1;Name=WP_000899563.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459965.1;locus_tag=C9E94_RS01345;product=envelope biogenesis factor ElyC;protein_id=WP_000899563.1;transl_table=11
NZ_PYJR01000013.1	RefSeq	gene	18910	19713	.	+	.	ID=gene-C9E94_RS01350;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=C9E94_RS01350;old_locus_tag=C9E94_01375
NZ_PYJR01000013.1	Protein Homology	CDS	18910	19713	.	+	0	ID=cds-WP_001154025.1;Parent=gene-C9E94_RS01350;Dbxref=GenBank:WP_001154025.1;Name=WP_001154025.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459966.1;locus_tag=C9E94_RS01350;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_001154025.1;transl_table=11
NZ_PYJR01000013.1	RefSeq	gene	19706	21028	.	+	.	ID=gene-C9E94_RS01355;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=C9E94_RS01355;old_locus_tag=C9E94_01380
NZ_PYJR01000013.1	Protein Homology	CDS	19706	21028	.	+	0	ID=cds-WP_001288828.1;Parent=gene-C9E94_RS01355;Dbxref=GenBank:WP_001288828.1;Name=WP_001288828.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=C9E94_RS01355;product=chromosome partition protein MukF;protein_id=WP_001288828.1;transl_table=11
NZ_PYJR01000013.1	RefSeq	gene	21009	21713	.	+	.	ID=gene-C9E94_RS01360;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=C9E94_RS01360;old_locus_tag=C9E94_01385
NZ_PYJR01000013.1	Protein Homology	CDS	21009	21713	.	+	0	ID=cds-WP_000060025.1;Parent=gene-C9E94_RS01360;Dbxref=GenBank:WP_000060025.1;Name=WP_000060025.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=C9E94_RS01360;product=chromosome partition protein MukE;protein_id=WP_000060025.1;transl_table=11
NZ_PYJR01000013.1	RefSeq	gene	21713	26179	.	+	.	ID=gene-C9E94_RS01365;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=C9E94_RS01365;old_locus_tag=C9E94_01390
NZ_PYJR01000013.1	Protein Homology	CDS	21713	26179	.	+	0	ID=cds-WP_017465607.1;Parent=gene-C9E94_RS01365;Dbxref=GenBank:WP_017465607.1;Name=WP_017465607.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459969.1;locus_tag=C9E94_RS01365;product=chromosome partition protein MukB;protein_id=WP_017465607.1;transl_table=11
NZ_PYJR01000013.1	RefSeq	gene	26524	28344	.	+	.	ID=gene-C9E94_RS01370;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=C9E94_RS01370;old_locus_tag=C9E94_01395
NZ_PYJR01000013.1	Protein Homology	CDS	26524	28344	.	+	0	ID=cds-WP_000925883.1;Parent=gene-C9E94_RS01370;Dbxref=GenBank:WP_000925883.1;Name=WP_000925883.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459970.1;locus_tag=C9E94_RS01370;product=L%2CD-transpeptidase;protein_id=WP_000925883.1;transl_table=11
NZ_PYJR01000013.1	RefSeq	gene	28604	29152	.	+	.	ID=gene-C9E94_RS01375;Name=C9E94_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01375;old_locus_tag=C9E94_01405
NZ_PYJR01000013.1	Protein Homology	CDS	28604	29152	.	+	0	ID=cds-WP_000357052.1;Parent=gene-C9E94_RS01375;Dbxref=GenBank:WP_000357052.1;Name=WP_000357052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459971.1;locus_tag=C9E94_RS01375;product=YcbK family protein;protein_id=WP_000357052.1;transl_table=11
NZ_PYJR01000013.1	RefSeq	gene	29180	29827	.	+	.	ID=gene-C9E94_RS01380;Name=C9E94_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01380;old_locus_tag=C9E94_01410
NZ_PYJR01000013.1	Protein Homology	CDS	29180	29827	.	+	0	ID=cds-WP_001109471.1;Parent=gene-C9E94_RS01380;Dbxref=GenBank:WP_001109471.1;Name=WP_001109471.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=C9E94_RS01380;product=MBL fold metallo-hydrolase;protein_id=WP_001109471.1;transl_table=11
NZ_PYJR01000013.1	RefSeq	gene	29889	31079	.	-	.	ID=gene-C9E94_RS01385;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=C9E94_RS01385;old_locus_tag=C9E94_01415
NZ_PYJR01000013.1	Protein Homology	CDS	29889	31079	.	-	0	ID=cds-WP_000462653.1;Parent=gene-C9E94_RS01385;Dbxref=GenBank:WP_000462653.1;Name=WP_000462653.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=C9E94_RS01385;product=aspartate transaminase;protein_id=WP_000462653.1;transl_table=11
NZ_PYJR01000013.1	RefSeq	gene	31264	32355	.	-	.	ID=gene-C9E94_RS01390;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=C9E94_RS01390;old_locus_tag=C9E94_01420
NZ_PYJR01000013.1	Protein Homology	CDS	31264	32355	.	-	0	ID=cds-WP_000977713.1;Parent=gene-C9E94_RS01390;Dbxref=GenBank:WP_000977713.1;Name=WP_000977713.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459974.1;locus_tag=C9E94_RS01390;product=porin OmpF;protein_id=WP_000977713.1;transl_table=11
##sequence-region NZ_PYJR01000041.1 1 31761
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000041.1	RefSeq	region	1	31761	.	+	.	ID=NZ_PYJR01000041.1:1..31761;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000041.1	RefSeq	gene	295	1815	.	-	.	ID=gene-C9E94_RS04830;Name=C9E94_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04830;old_locus_tag=C9E94_04960
NZ_PYJR01000041.1	Protein Homology	CDS	295	1815	.	-	0	ID=cds-WP_000094651.1;Parent=gene-C9E94_RS04830;Dbxref=GenBank:WP_000094651.1;Name=WP_000094651.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462131.1;locus_tag=C9E94_RS04830;product=methyl-accepting chemotaxis protein;protein_id=WP_000094651.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	2245	3624	.	+	.	ID=gene-C9E94_RS04835;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=C9E94_RS04835;old_locus_tag=C9E94_04970
NZ_PYJR01000041.1	Protein Homology	CDS	2245	3624	.	+	0	ID=cds-WP_001536702.1;Parent=gene-C9E94_RS04835;Dbxref=GenBank:WP_001536702.1;Name=WP_001536702.1;Ontology_term=GO:0009447,GO:0030170,GO:0033094;gbkey=CDS;gene=ygjG;go_function=pyridoxal phosphate binding|0030170||IEA,putrescine--2-oxoglutarate transaminase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894971.1;locus_tag=C9E94_RS04835;product=putrescine aminotransferase;protein_id=WP_001536702.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	3794	5812	.	+	.	ID=gene-C9E94_RS04840;Name=C9E94_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04840;old_locus_tag=C9E94_04975
NZ_PYJR01000041.1	Protein Homology	CDS	3794	5812	.	+	0	ID=cds-WP_000121536.1;Parent=gene-C9E94_RS04840;Dbxref=GenBank:WP_000121536.1;Name=WP_000121536.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=C9E94_RS04840;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_000121536.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	5893	7029	.	-	.	ID=gene-C9E94_RS04845;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=C9E94_RS04845;old_locus_tag=C9E94_04980
NZ_PYJR01000041.1	Protein Homology	CDS	5893	7029	.	-	0	ID=cds-WP_000019983.1;Parent=gene-C9E94_RS04845;Dbxref=GenBank:WP_000019983.1;Name=WP_000019983.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462134.1;locus_tag=C9E94_RS04845;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_000019983.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	7115	7612	.	+	.	ID=gene-C9E94_RS04850;Name=C9E94_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04850;old_locus_tag=C9E94_04985
NZ_PYJR01000041.1	Protein Homology	CDS	7115	7612	.	+	0	ID=cds-WP_000202966.1;Parent=gene-C9E94_RS04850;Dbxref=GenBank:WP_000202966.1;Name=WP_000202966.1;Ontology_term=GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462135.1;locus_tag=C9E94_RS04850;product=M48 metallopeptidase family protein;protein_id=WP_000202966.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	7764	8456	.	+	.	ID=gene-C9E94_RS04855;Name=C9E94_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04855;old_locus_tag=C9E94_04990
NZ_PYJR01000041.1	Protein Homology	CDS	7764	8456	.	+	0	ID=cds-WP_000951045.1;Parent=gene-C9E94_RS04855;Dbxref=GenBank:WP_000951045.1;Name=WP_000951045.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462136.1;locus_tag=C9E94_RS04855;product=SanA/YdcF family protein;protein_id=WP_000951045.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	8545	9543	.	+	.	ID=gene-C9E94_RS04860;Name=C9E94_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04860;old_locus_tag=C9E94_04995
NZ_PYJR01000041.1	Protein Homology	CDS	8545	9543	.	+	0	ID=cds-WP_000617682.1;Parent=gene-C9E94_RS04860;Dbxref=GenBank:WP_000617682.1;Name=WP_000617682.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462137.1;locus_tag=C9E94_RS04860;product=Gfo/Idh/MocA family protein;protein_id=WP_000617682.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	9817	10785	.	+	.	ID=gene-C9E94_RS04865;Name=C9E94_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04865;old_locus_tag=C9E94_05000
NZ_PYJR01000041.1	Protein Homology	CDS	9817	10785	.	+	0	ID=cds-WP_001098833.1;Parent=gene-C9E94_RS04865;Dbxref=GenBank:WP_001098833.1;Name=WP_001098833.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462138.1;locus_tag=C9E94_RS04865;product=TerC family protein;protein_id=WP_001098833.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	11040	12284	.	+	.	ID=gene-C9E94_RS04870;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=C9E94_RS04870;old_locus_tag=C9E94_05005
NZ_PYJR01000041.1	Protein Homology	CDS	11040	12284	.	+	0	ID=cds-WP_000235361.1;Parent=gene-C9E94_RS04870;Dbxref=GenBank:WP_000235361.1;Name=WP_000235361.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462139.1;locus_tag=C9E94_RS04870;product=serine/threonine transporter SstT;protein_id=WP_000235361.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	12734	13396	.	+	.	ID=gene-C9E94_RS04875;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=C9E94_RS04875;old_locus_tag=C9E94_05015
NZ_PYJR01000041.1	Protein Homology	CDS	12734	13396	.	+	0	ID=cds-WP_000422143.1;Parent=gene-C9E94_RS04875;Dbxref=GenBank:WP_000422143.1;Name=WP_000422143.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462140.1;locus_tag=C9E94_RS04875;product=DedA family general envelope maintenance protein YqjA;protein_id=WP_000422143.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	13400	13783	.	+	.	ID=gene-C9E94_RS04880;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=C9E94_RS04880;old_locus_tag=C9E94_05020
NZ_PYJR01000041.1	Protein Homology	CDS	13400	13783	.	+	0	ID=cds-WP_000917516.1;Parent=gene-C9E94_RS04880;Dbxref=GenBank:WP_000917516.1;Name=WP_000917516.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462141.1;locus_tag=C9E94_RS04880;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_000917516.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	13928	14296	.	+	.	ID=gene-C9E94_RS04885;Name=C9E94_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04885;old_locus_tag=C9E94_05025
NZ_PYJR01000041.1	Protein Homology	CDS	13928	14296	.	+	0	ID=cds-WP_000877297.1;Parent=gene-C9E94_RS04885;Dbxref=GenBank:WP_000877297.1;Name=WP_000877297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462142.1;locus_tag=C9E94_RS04885;product=DUF1090 domain-containing protein;protein_id=WP_000877297.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	14338	14643	.	+	.	ID=gene-C9E94_RS04890;Name=C9E94_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04890;old_locus_tag=C9E94_05030
NZ_PYJR01000041.1	Protein Homology	CDS	14338	14643	.	+	0	ID=cds-WP_000031219.1;Parent=gene-C9E94_RS04890;Dbxref=GenBank:WP_000031219.1;Name=WP_000031219.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462143.1;locus_tag=C9E94_RS04890;product=DUF883 family protein;protein_id=WP_000031219.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	14646	15044	.	+	.	ID=gene-C9E94_RS04895;Name=C9E94_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04895;old_locus_tag=C9E94_05035
NZ_PYJR01000041.1	Protein Homology	CDS	14646	15044	.	+	0	ID=cds-WP_000785626.1;Parent=gene-C9E94_RS04895;Dbxref=GenBank:WP_000785626.1;Name=WP_000785626.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462144.1;locus_tag=C9E94_RS04895;product=phage holin family protein;protein_id=WP_000785626.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	15041	15340	.	+	.	ID=gene-C9E94_RS04900;Name=C9E94_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04900;old_locus_tag=C9E94_05040
NZ_PYJR01000041.1	Protein Homology	CDS	15041	15340	.	+	0	ID=cds-WP_000095496.1;Parent=gene-C9E94_RS04900;Dbxref=GenBank:WP_000095496.1;Name=WP_000095496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462145.1;locus_tag=C9E94_RS04900;product=YqjK-like family protein;protein_id=WP_000095496.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	15578	15970	.	+	.	ID=gene-C9E94_RS04905;Name=C9E94_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04905;old_locus_tag=C9E94_05045
NZ_PYJR01000041.1	Protein Homology	CDS	15578	15970	.	+	0	ID=cds-WP_001592732.1;Parent=gene-C9E94_RS04905;Dbxref=GenBank:WP_001592732.1;Name=WP_001592732.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=C9E94_RS04905;product=DoxX family protein;protein_id=WP_001592732.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	16038	17024	.	+	.	ID=gene-C9E94_RS04910;Name=C9E94_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04910;old_locus_tag=C9E94_05050
NZ_PYJR01000041.1	Protein Homology	CDS	16038	17024	.	+	0	ID=cds-WP_000531161.1;Parent=gene-C9E94_RS04910;Dbxref=GenBank:WP_000531161.1;Name=WP_000531161.1;Ontology_term=GO:0004364,GO:0016491;gbkey=CDS;go_function=glutathione transferase activity|0004364||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462147.1;locus_tag=C9E94_RS04910;product=glutathione S-transferase family protein;protein_id=WP_000531161.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	17148	17513	.	+	.	ID=gene-C9E94_RS04915;Name=C9E94_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04915;old_locus_tag=C9E94_05055
NZ_PYJR01000041.1	Protein Homology	CDS	17148	17513	.	+	0	ID=cds-WP_000384139.1;Parent=gene-C9E94_RS04915;Dbxref=GenBank:WP_000384139.1;Name=WP_000384139.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462148.1;locus_tag=C9E94_RS04915;product=DUF805 domain-containing protein;protein_id=WP_000384139.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	17552	18448	.	-	.	ID=gene-C9E94_RS04920;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=C9E94_RS04920;old_locus_tag=C9E94_05060
NZ_PYJR01000041.1	Protein Homology	CDS	17552	18448	.	-	0	ID=cds-WP_001041026.1;Parent=gene-C9E94_RS04920;Dbxref=GenBank:WP_001041026.1;Name=WP_001041026.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462149.1;locus_tag=C9E94_RS04920;product=DNA-binding transcriptional regulator YhaJ;protein_id=WP_001041026.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	18553	19254	.	+	.	ID=gene-C9E94_RS04925;Name=C9E94_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04925;old_locus_tag=C9E94_05065
NZ_PYJR01000041.1	Protein Homology	CDS	18553	19254	.	+	0	ID=cds-WP_000633547.1;Parent=gene-C9E94_RS04925;Dbxref=GenBank:WP_000633547.1;Name=WP_000633547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462150.1;locus_tag=C9E94_RS04925;product=pirin family protein;protein_id=WP_000633547.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	19278	19442	.	+	.	ID=gene-C9E94_RS04930;Name=C9E94_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04930;old_locus_tag=C9E94_05070
NZ_PYJR01000041.1	Protein Homology	CDS	19278	19442	.	+	0	ID=cds-WP_000039324.1;Parent=gene-C9E94_RS04930;Dbxref=GenBank:WP_000039324.1;Name=WP_000039324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462151.1;locus_tag=C9E94_RS04930;product=hypothetical protein;protein_id=WP_000039324.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	19555	20865	.	-	.	ID=gene-C9E94_RS04935;Name=C9E94_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04935;old_locus_tag=C9E94_05075
NZ_PYJR01000041.1	Protein Homology	CDS	19555	20865	.	-	0	ID=cds-WP_000463090.1;Parent=gene-C9E94_RS04935;Dbxref=GenBank:WP_000463090.1;Name=WP_000463090.1;Ontology_term=GO:0051539,GO:0080146;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,L-cysteine desulfhydrase activity|0080146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462152.1;locus_tag=C9E94_RS04935;product=L-cysteine desulfidase family protein;protein_id=WP_000463090.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	20891	22222	.	-	.	ID=gene-C9E94_RS04940;Name=C9E94_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04940;old_locus_tag=C9E94_05080
NZ_PYJR01000041.1	Protein Homology	CDS	20891	22222	.	-	0	ID=cds-WP_000443187.1;Parent=gene-C9E94_RS04940;Dbxref=GenBank:WP_000443187.1;Name=WP_000443187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462153.1;locus_tag=C9E94_RS04940;product=amino acid permease;protein_id=WP_000443187.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	22538	23902	.	-	.	ID=gene-C9E94_RS04945;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;locus_tag=C9E94_RS04945;old_locus_tag=C9E94_05085
NZ_PYJR01000041.1	Protein Homology	CDS	22538	23902	.	-	0	ID=cds-WP_000622080.1;Parent=gene-C9E94_RS04945;Dbxref=GenBank:WP_000622080.1;Name=WP_000622080.1;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462154.1;locus_tag=C9E94_RS04945;product=L-serine ammonia-lyase;protein_id=WP_000622080.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	23972	26266	.	-	.	ID=gene-C9E94_RS04950;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=C9E94_RS04950;old_locus_tag=C9E94_05090
NZ_PYJR01000041.1	Protein Homology	CDS	23972	26266	.	-	0	ID=cds-WP_000867321.1;Parent=gene-C9E94_RS04950;Dbxref=GenBank:WP_000867321.1;Name=WP_000867321.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462155.1;locus_tag=C9E94_RS04950;product=formate C-acetyltransferase;protein_id=WP_000867321.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	26300	27508	.	-	.	ID=gene-C9E94_RS04955;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=C9E94_RS04955;old_locus_tag=C9E94_05095
NZ_PYJR01000041.1	Protein Homology	CDS	26300	27508	.	-	0	ID=cds-WP_001001855.1;Parent=gene-C9E94_RS04955;Dbxref=GenBank:WP_001001855.1;Name=WP_001001855.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462156.1;locus_tag=C9E94_RS04955;product=propionate kinase;protein_id=WP_001001855.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	27575	28906	.	-	.	ID=gene-C9E94_RS04960;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=C9E94_RS04960;old_locus_tag=C9E94_05100
NZ_PYJR01000041.1	Protein Homology	CDS	27575	28906	.	-	0	ID=cds-WP_000108129.1;Parent=gene-C9E94_RS04960;Dbxref=GenBank:WP_000108129.1;Name=WP_000108129.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=C9E94_RS04960;product=threonine/serine transporter TdcC;protein_id=WP_000108129.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	28927	29916	.	-	.	ID=gene-C9E94_RS04965;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=C9E94_RS04965;old_locus_tag=C9E94_05105
NZ_PYJR01000041.1	Protein Homology	CDS	28927	29916	.	-	0	ID=cds-WP_000548368.1;Parent=gene-C9E94_RS04965;Dbxref=GenBank:WP_000548368.1;Name=WP_000548368.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462158.1;locus_tag=C9E94_RS04965;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_000548368.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	30014	30952	.	-	.	ID=gene-C9E94_RS04970;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=C9E94_RS04970;old_locus_tag=C9E94_05110
NZ_PYJR01000041.1	Protein Homology	CDS	30014	30952	.	-	0	ID=cds-WP_001094907.1;Parent=gene-C9E94_RS04970;Dbxref=GenBank:WP_001094907.1;Name=WP_001094907.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462159.1;locus_tag=C9E94_RS04970;product=transcriptional regulator TdcA;protein_id=WP_001094907.1;transl_table=11
NZ_PYJR01000041.1	RefSeq	gene	31551	31761	.	+	.	ID=gene-C9E94_RS23425;Name=C9E94_RS23425;end_range=31761,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23425;partial=true
NZ_PYJR01000041.1	GeneMarkS-2+	CDS	31551	31761	.	+	0	ID=cds-WP_139387212.1;Parent=gene-C9E94_RS23425;Dbxref=GenBank:WP_139387212.1;Name=WP_139387212.1;end_range=31761,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS23425;partial=true;product=hypothetical protein;protein_id=WP_139387212.1;transl_table=11
##sequence-region NZ_PYJR01000079.1 1 30944
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000079.1	RefSeq	region	1	30944	.	+	.	ID=NZ_PYJR01000079.1:1..30944;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000079.1	RefSeq	gene	135	992	.	+	.	ID=gene-C9E94_RS09975;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=C9E94_RS09975;old_locus_tag=C9E94_10190
NZ_PYJR01000079.1	Protein Homology	CDS	135	992	.	+	0	ID=cds-WP_135400975.1;Parent=gene-C9E94_RS09975;Dbxref=GenBank:WP_135400975.1;Name=WP_135400975.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459949.1;locus_tag=C9E94_RS09975;product=formate transporter FocA;protein_id=WP_135400975.1;transl_table=11
NZ_PYJR01000079.1	RefSeq	gene	1052	3334	.	+	.	ID=gene-C9E94_RS09980;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=C9E94_RS09980;old_locus_tag=C9E94_10195
NZ_PYJR01000079.1	Protein Homology	CDS	1052	3334	.	+	0	ID=cds-WP_001292799.1;Parent=gene-C9E94_RS09980;Dbxref=GenBank:WP_001292799.1;Name=WP_001292799.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=C9E94_RS09980;product=formate C-acetyltransferase;protein_id=WP_001292799.1;transl_table=11
NZ_PYJR01000079.1	RefSeq	gene	3407	4366	.	-	.	ID=gene-C9E94_RS09985;Name=sopD2;gbkey=Gene;gene=sopD2;gene_biotype=protein_coding;locus_tag=C9E94_RS09985;old_locus_tag=C9E94_10200
NZ_PYJR01000079.1	Protein Homology	CDS	3407	4366	.	-	0	ID=cds-WP_001145551.1;Parent=gene-C9E94_RS09985;Dbxref=GenBank:WP_001145551.1;Name=WP_001145551.1;gbkey=CDS;gene=sopD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459947.1;locus_tag=C9E94_RS09985;product=type III secretion system effector SopD2;protein_id=WP_001145551.1;transl_table=11
NZ_PYJR01000079.1	RefSeq	pseudogene	4503	4833	.	+	.	ID=gene-C9E94_RS23625;Name=C9E94_RS23625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23625;old_locus_tag=C9E94_10205;partial=true;pseudo=true;start_range=.,4503
NZ_PYJR01000079.1	Protein Homology	CDS	4503	4833	.	+	0	ID=cds-C9E94_RS23625;Parent=gene-C9E94_RS23625;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459946.1;locus_tag=C9E94_RS23625;partial=true;product=cytoplasmic protein;pseudo=true;start_range=.,4503;transl_table=11
NZ_PYJR01000079.1	RefSeq	gene	4952	5749	.	+	.	ID=gene-C9E94_RS09995;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=C9E94_RS09995;old_locus_tag=C9E94_10210
NZ_PYJR01000079.1	Protein Homology	CDS	4952	5749	.	+	0	ID=cds-WP_000067928.1;Parent=gene-C9E94_RS09995;Dbxref=GenBank:WP_000067928.1;Name=WP_000067928.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015696619.1;locus_tag=C9E94_RS09995;product=pyruvate formate lyase 1-activating protein;protein_id=WP_000067928.1;transl_table=11
NZ_PYJR01000079.1	RefSeq	gene	6042	7463	.	-	.	ID=gene-C9E94_RS10000;Name=C9E94_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10000;old_locus_tag=C9E94_10215
NZ_PYJR01000079.1	Protein Homology	CDS	6042	7463	.	-	0	ID=cds-WP_001134264.1;Parent=gene-C9E94_RS10000;Dbxref=GenBank:WP_001134264.1;Name=WP_001134264.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459944.1;locus_tag=C9E94_RS10000;product=APC family permease;protein_id=WP_001134264.1;transl_table=11
NZ_PYJR01000079.1	RefSeq	gene	7681	8829	.	-	.	ID=gene-C9E94_RS10005;Name=C9E94_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10005;old_locus_tag=C9E94_10220
NZ_PYJR01000079.1	Protein Homology	CDS	7681	8829	.	-	0	ID=cds-WP_135400976.1;Parent=gene-C9E94_RS10005;Dbxref=GenBank:WP_135400976.1;Name=WP_135400976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459943.1;locus_tag=C9E94_RS10005;product=MFS transporter;protein_id=WP_135400976.1;transl_table=11
NZ_PYJR01000079.1	RefSeq	gene	9179	10042	.	-	.	ID=gene-C9E94_RS10010;Name=C9E94_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10010;old_locus_tag=C9E94_10225
NZ_PYJR01000079.1	Protein Homology	CDS	9179	10042	.	-	0	ID=cds-WP_135400977.1;Parent=gene-C9E94_RS10010;Dbxref=GenBank:WP_135400977.1;Name=WP_135400977.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459942.1;locus_tag=C9E94_RS10010;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_135400977.1;transl_table=11
NZ_PYJR01000079.1	RefSeq	gene	10044	10661	.	-	.	ID=gene-C9E94_RS10015;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=C9E94_RS10015;old_locus_tag=C9E94_10230
NZ_PYJR01000079.1	Protein Homology	CDS	10044	10661	.	-	0	ID=cds-WP_000213069.1-2;Parent=gene-C9E94_RS10015;Dbxref=GenBank:WP_000213069.1;Name=WP_000213069.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=C9E94_RS10015;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_000213069.1;transl_table=11
NZ_PYJR01000079.1	RefSeq	gene	10672	13116	.	-	.	ID=gene-C9E94_RS10020;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=C9E94_RS10020;old_locus_tag=C9E94_10235
NZ_PYJR01000079.1	Protein Homology	CDS	10672	13116	.	-	0	ID=cds-WP_000850250.1;Parent=gene-C9E94_RS10020;Dbxref=GenBank:WP_000850250.1;Name=WP_000850250.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459940.1;locus_tag=C9E94_RS10020;product=dimethylsulfoxide reductase subunit A;protein_id=WP_000850250.1;transl_table=11
NZ_PYJR01000079.1	RefSeq	gene	13354	14646	.	-	.	ID=gene-C9E94_RS10025;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=C9E94_RS10025;old_locus_tag=C9E94_10240
NZ_PYJR01000079.1	Protein Homology	CDS	13354	14646	.	-	0	ID=cds-WP_000886697.1;Parent=gene-C9E94_RS10025;Dbxref=GenBank:WP_000886697.1;Name=WP_000886697.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=C9E94_RS10025;product=serine--tRNA ligase;protein_id=WP_000886697.1;transl_table=11
NZ_PYJR01000079.1	RefSeq	gene	14905	16248	.	-	.	ID=gene-C9E94_RS10030;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=C9E94_RS10030;old_locus_tag=C9E94_10245
NZ_PYJR01000079.1	Protein Homology	CDS	14905	16248	.	-	0	ID=cds-WP_000067785.1;Parent=gene-C9E94_RS10030;Dbxref=GenBank:WP_000067785.1;Name=WP_000067785.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459938.1;locus_tag=C9E94_RS10030;product=replication-associated recombination protein RarA;protein_id=WP_000067785.1;transl_table=11
NZ_PYJR01000079.1	RefSeq	gene	16258	16869	.	-	.	ID=gene-C9E94_RS10035;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=C9E94_RS10035;old_locus_tag=C9E94_10250
NZ_PYJR01000079.1	Protein Homology	CDS	16258	16869	.	-	0	ID=cds-WP_001519746.1;Parent=gene-C9E94_RS10035;Dbxref=GenBank:WP_001519746.1;Name=WP_001519746.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=C9E94_RS10035;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_001519746.1;transl_table=11
NZ_PYJR01000079.1	RefSeq	gene	17012	21049	.	-	.	ID=gene-C9E94_RS10040;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=C9E94_RS10040;old_locus_tag=C9E94_10255
NZ_PYJR01000079.1	Protein Homology	CDS	17012	21049	.	-	0	ID=cds-WP_135400978.1;Parent=gene-C9E94_RS10040;Dbxref=GenBank:WP_135400978.1;Name=WP_135400978.1;Ontology_term=GO:0003677,GO:0005524;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=C9E94_RS10040;product=DNA translocase FtsK;protein_id=WP_135400978.1;transl_table=11
NZ_PYJR01000079.1	RefSeq	gene	21184	21678	.	-	.	ID=gene-C9E94_RS10045;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=C9E94_RS10045;old_locus_tag=C9E94_10260
NZ_PYJR01000079.1	Protein Homology	CDS	21184	21678	.	-	0	ID=cds-WP_000228469.1;Parent=gene-C9E94_RS10045;Dbxref=GenBank:WP_000228469.1;Name=WP_000228469.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=C9E94_RS10045;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228469.1;transl_table=11
NZ_PYJR01000079.1	RefSeq	gene	22225	23193	.	+	.	ID=gene-C9E94_RS10050;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=C9E94_RS10050;old_locus_tag=C9E94_10270
NZ_PYJR01000079.1	Protein Homology	CDS	22225	23193	.	+	0	ID=cds-WP_000537406.1;Parent=gene-C9E94_RS10050;Dbxref=GenBank:WP_000537406.1;Name=WP_000537406.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459934.1;locus_tag=C9E94_RS10050;product=thioredoxin-disulfide reductase;protein_id=WP_000537406.1;transl_table=11
NZ_PYJR01000079.1	RefSeq	gene	23307	25073	.	+	.	ID=gene-C9E94_RS10055;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=C9E94_RS10055;old_locus_tag=C9E94_10275
NZ_PYJR01000079.1	Protein Homology	CDS	23307	25073	.	+	0	ID=cds-WP_001044541.1;Parent=gene-C9E94_RS10055;Dbxref=GenBank:WP_001044541.1;Name=WP_001044541.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459933.1;locus_tag=C9E94_RS10055;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_001044541.1;transl_table=11
NZ_PYJR01000079.1	RefSeq	gene	25074	26795	.	+	.	ID=gene-C9E94_RS10060;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=C9E94_RS10060;old_locus_tag=C9E94_10280
NZ_PYJR01000079.1	Protein Homology	CDS	25074	26795	.	+	0	ID=cds-WP_001202257.1;Parent=gene-C9E94_RS10060;Dbxref=GenBank:WP_001202257.1;Name=WP_001202257.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459932.1;locus_tag=C9E94_RS10060;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_001202257.1;transl_table=11
NZ_PYJR01000079.1	RefSeq	gene	26840	27544	.	+	.	ID=gene-C9E94_RS10065;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=C9E94_RS10065;old_locus_tag=C9E94_10285
NZ_PYJR01000079.1	Protein Homology	CDS	26840	27544	.	+	0	ID=cds-WP_001241652.1;Parent=gene-C9E94_RS10065;Dbxref=GenBank:WP_001241652.1;Name=WP_001241652.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459931.1;locus_tag=C9E94_RS10065;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_001241652.1;transl_table=11
NZ_PYJR01000079.1	RefSeq	gene	27856	28074	.	+	.	ID=gene-C9E94_RS10075;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=C9E94_RS10075;old_locus_tag=C9E94_10295
NZ_PYJR01000079.1	Protein Homology	CDS	27856	28074	.	+	0	ID=cds-WP_001040187.1;Parent=gene-C9E94_RS10075;Dbxref=GenBank:WP_001040187.1;Name=WP_001040187.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=C9E94_RS10075;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11
NZ_PYJR01000079.1	RefSeq	gene	28165	29076	.	-	.	ID=gene-C9E94_RS10080;Name=C9E94_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10080;old_locus_tag=C9E94_10300
NZ_PYJR01000079.1	Protein Homology	CDS	28165	29076	.	-	0	ID=cds-WP_135400979.1;Parent=gene-C9E94_RS10080;Dbxref=GenBank:WP_135400979.1;Name=WP_135400979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459928.1;locus_tag=C9E94_RS10080;product=LysR family transcriptional regulator;protein_id=WP_135400979.1;transl_table=11
NZ_PYJR01000079.1	RefSeq	gene	29185	30045	.	+	.	ID=gene-C9E94_RS10085;Name=C9E94_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10085;old_locus_tag=C9E94_10305
NZ_PYJR01000079.1	Protein Homology	CDS	29185	30045	.	+	0	ID=cds-WP_000809969.1;Parent=gene-C9E94_RS10085;Dbxref=GenBank:WP_000809969.1;Name=WP_000809969.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459927.1;locus_tag=C9E94_RS10085;product=pirin family protein;protein_id=WP_000809969.1;transl_table=11
NZ_PYJR01000079.1	RefSeq	gene	30065	30742	.	+	.	ID=gene-C9E94_RS10090;Name=C9E94_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10090;old_locus_tag=C9E94_10310
NZ_PYJR01000079.1	Protein Homology	CDS	30065	30742	.	+	0	ID=cds-WP_135400980.1;Parent=gene-C9E94_RS10090;Dbxref=GenBank:WP_135400980.1;Name=WP_135400980.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459926.1;locus_tag=C9E94_RS10090;product=hydrolase;protein_id=WP_135400980.1;transl_table=11
##sequence-region NZ_PYJR01000097.1 1 133763
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000097.1	RefSeq	region	1	133763	.	+	.	ID=NZ_PYJR01000097.1:1..133763;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000097.1	RefSeq	pseudogene	1	289	.	+	.	ID=gene-C9E94_RS13380;Name=sseL;gbkey=Gene;gene=sseL;gene_biotype=pseudogene;locus_tag=C9E94_RS13380;old_locus_tag=C9E94_13710;partial=true;pseudo=true;start_range=.,1
NZ_PYJR01000097.1	Protein Homology	CDS	1	289	.	+	1	ID=cds-C9E94_RS13380;Parent=gene-C9E94_RS13380;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=sseL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017745.1;locus_tag=C9E94_RS13380;partial=true;product=SPI-2 type III secretion system effector deubiquitinase SseL;pseudo=true;start_range=.,1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	376	552	.	-	.	ID=gene-C9E94_RS13385;Name=C9E94_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13385;old_locus_tag=C9E94_13715
NZ_PYJR01000097.1	Protein Homology	CDS	376	552	.	-	0	ID=cds-WP_023993403.1;Parent=gene-C9E94_RS13385;Dbxref=GenBank:WP_023993403.1;Name=WP_023993403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461230.1;locus_tag=C9E94_RS13385;product=competence damage-inducible protein A;protein_id=WP_023993403.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	558	1361	.	-	.	ID=gene-C9E94_RS13390;Name=yfaU;gbkey=Gene;gene=yfaU;gene_biotype=protein_coding;locus_tag=C9E94_RS13390;old_locus_tag=C9E94_13720
NZ_PYJR01000097.1	Protein Homology	CDS	558	1361	.	-	0	ID=cds-WP_000992941.1;Parent=gene-C9E94_RS13390;Dbxref=GenBank:WP_000992941.1;Name=WP_000992941.1;gbkey=CDS;gene=yfaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461231.1;locus_tag=C9E94_RS13390;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WP_000992941.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	1387	2676	.	-	.	ID=gene-C9E94_RS13395;Name=C9E94_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13395;old_locus_tag=C9E94_13725
NZ_PYJR01000097.1	Protein Homology	CDS	1387	2676	.	-	0	ID=cds-WP_000028931.1;Parent=gene-C9E94_RS13395;Dbxref=GenBank:WP_000028931.1;Name=WP_000028931.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461232.1;locus_tag=C9E94_RS13395;product=MFS transporter;protein_id=WP_000028931.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	2732	3937	.	-	.	ID=gene-C9E94_RS13400;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=protein_coding;locus_tag=C9E94_RS13400;old_locus_tag=C9E94_13730
NZ_PYJR01000097.1	Protein Homology	CDS	2732	3937	.	-	0	ID=cds-WP_001530644.1;Parent=gene-C9E94_RS13400;Dbxref=GenBank:WP_001530644.1;Name=WP_001530644.1;Ontology_term=GO:0050032;gbkey=CDS;gene=rhmD;go_function=L-rhamnonate dehydratase activity|0050032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416750.2;locus_tag=C9E94_RS13400;product=L-rhamnonate dehydratase;protein_id=WP_001530644.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	3951	4733	.	-	.	ID=gene-C9E94_RS13405;Name=C9E94_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13405;old_locus_tag=C9E94_13735
NZ_PYJR01000097.1	Protein Homology	CDS	3951	4733	.	-	0	ID=cds-WP_000894170.1;Parent=gene-C9E94_RS13405;Dbxref=GenBank:WP_000894170.1;Name=WP_000894170.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461234.1;locus_tag=C9E94_RS13405;product=IclR family transcriptional regulator;protein_id=WP_000894170.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	4983	6179	.	-	.	ID=gene-C9E94_RS13410;Name=C9E94_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13410;old_locus_tag=C9E94_13740
NZ_PYJR01000097.1	Protein Homology	CDS	4983	6179	.	-	0	ID=cds-WP_053445768.1;Parent=gene-C9E94_RS13410;Dbxref=GenBank:WP_053445768.1;Name=WP_053445768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461235.1;locus_tag=C9E94_RS13410;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_053445768.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	6294	6836	.	-	.	ID=gene-C9E94_RS13415;Name=C9E94_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13415;old_locus_tag=C9E94_13745
NZ_PYJR01000097.1	Protein Homology	CDS	6294	6836	.	-	0	ID=cds-WP_001670658.1;Parent=gene-C9E94_RS13415;Dbxref=GenBank:WP_001670658.1;Name=WP_001670658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311165.2;locus_tag=C9E94_RS13415;product=YfaZ family protein;protein_id=WP_001670658.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	7115	7540	.	+	.	ID=gene-C9E94_RS13420;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=C9E94_RS13420;old_locus_tag=C9E94_13750
NZ_PYJR01000097.1	Protein Homology	CDS	7115	7540	.	+	0	ID=cds-WP_001249902.1;Parent=gene-C9E94_RS13420;Dbxref=GenBank:WP_001249902.1;Name=WP_001249902.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461237.1;locus_tag=C9E94_RS13420;product=nucleoside triphosphatase NudI;protein_id=WP_001249902.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	7585	8190	.	-	.	ID=gene-C9E94_RS13425;Name=pmrG;gbkey=Gene;gene=pmrG;gene_biotype=protein_coding;locus_tag=C9E94_RS13425;old_locus_tag=C9E94_13755
NZ_PYJR01000097.1	Protein Homology	CDS	7585	8190	.	-	0	ID=cds-WP_000879258.1;Parent=gene-C9E94_RS13425;Dbxref=GenBank:WP_000879258.1;Name=WP_000879258.1;gbkey=CDS;gene=pmrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461238.1;locus_tag=C9E94_RS13425;product=lipopolysaccharide core heptose(II)-phosphate phosphatase PmrG;protein_id=WP_000879258.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	8489	9628	.	+	.	ID=gene-C9E94_RS13430;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=C9E94_RS13430;old_locus_tag=C9E94_13760
NZ_PYJR01000097.1	Protein Homology	CDS	8489	9628	.	+	0	ID=cds-WP_023181081.1;Parent=gene-C9E94_RS13430;Dbxref=GenBank:WP_023181081.1;Name=WP_023181081.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=C9E94_RS13430;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_023181081.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	9631	10614	.	+	.	ID=gene-C9E94_RS13435;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=C9E94_RS13435;old_locus_tag=C9E94_13765
NZ_PYJR01000097.1	Protein Homology	CDS	9631	10614	.	+	0	ID=cds-WP_000458888.1;Parent=gene-C9E94_RS13435;Dbxref=GenBank:WP_000458888.1;Name=WP_000458888.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461240.1;locus_tag=C9E94_RS13435;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_000458888.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	10611	12593	.	+	.	ID=gene-C9E94_RS13440;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=C9E94_RS13440;old_locus_tag=C9E94_13770
NZ_PYJR01000097.1	Protein Homology	CDS	10611	12593	.	+	0	ID=cds-WP_135401080.1;Parent=gene-C9E94_RS13440;Dbxref=GenBank:WP_135401080.1;Name=WP_135401080.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461241.1;locus_tag=C9E94_RS13440;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_135401080.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	12590	13489	.	+	.	ID=gene-C9E94_RS13445;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=C9E94_RS13445;old_locus_tag=C9E94_13775
NZ_PYJR01000097.1	Protein Homology	CDS	12590	13489	.	+	0	ID=cds-WP_000169769.1;Parent=gene-C9E94_RS13445;Dbxref=GenBank:WP_000169769.1;Name=WP_000169769.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461242.1;locus_tag=C9E94_RS13445;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_000169769.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	13486	15132	.	+	.	ID=gene-C9E94_RS13450;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=C9E94_RS13450;old_locus_tag=C9E94_13780
NZ_PYJR01000097.1	Protein Homology	CDS	13486	15132	.	+	0	ID=cds-WP_017465979.1;Parent=gene-C9E94_RS13450;Dbxref=GenBank:WP_017465979.1;Name=WP_017465979.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461243.1;locus_tag=C9E94_RS13450;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_017465979.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	15129	15464	.	+	.	ID=gene-C9E94_RS13455;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=C9E94_RS13455;old_locus_tag=C9E94_13785
NZ_PYJR01000097.1	Protein Homology	CDS	15129	15464	.	+	0	ID=cds-WP_000580685.1;Parent=gene-C9E94_RS13455;Dbxref=GenBank:WP_000580685.1;Name=WP_000580685.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461244.1;locus_tag=C9E94_RS13455;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_000580685.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	15464	15841	.	+	.	ID=gene-C9E94_RS13460;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=C9E94_RS13460;old_locus_tag=C9E94_13790
NZ_PYJR01000097.1	Protein Homology	CDS	15464	15841	.	+	0	ID=cds-WP_000538694.1;Parent=gene-C9E94_RS13460;Dbxref=GenBank:WP_000538694.1;Name=WP_000538694.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461245.1;locus_tag=C9E94_RS13460;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_000538694.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	15836	16093	.	-	.	ID=gene-C9E94_RS13465;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=C9E94_RS13465;old_locus_tag=C9E94_13795
NZ_PYJR01000097.1	Protein Homology	CDS	15836	16093	.	-	0	ID=cds-WP_000455132.1;Parent=gene-C9E94_RS13465;Dbxref=GenBank:WP_000455132.1;Name=WP_000455132.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461246.1;locus_tag=C9E94_RS13465;product=signal transduction protein PmrD;protein_id=WP_000455132.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	16191	17558	.	-	.	ID=gene-C9E94_RS13470;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=C9E94_RS13470;old_locus_tag=C9E94_13800
NZ_PYJR01000097.1	Protein Homology	CDS	16191	17558	.	-	0	ID=cds-WP_000144660.1;Parent=gene-C9E94_RS13470;Dbxref=GenBank:WP_000144660.1;Name=WP_000144660.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461247.1;locus_tag=C9E94_RS13470;product=o-succinylbenzoate--CoA ligase;protein_id=WP_000144660.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	17555	18517	.	-	.	ID=gene-C9E94_RS13475;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=C9E94_RS13475;old_locus_tag=C9E94_13805
NZ_PYJR01000097.1	Protein Homology	CDS	17555	18517	.	-	0	ID=cds-WP_023210563.1;Parent=gene-C9E94_RS13475;Dbxref=GenBank:WP_023210563.1;Name=WP_023210563.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461248.1;locus_tag=C9E94_RS13475;product=o-succinylbenzoate synthase;protein_id=WP_023210563.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	18517	19374	.	-	.	ID=gene-C9E94_RS13480;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=C9E94_RS13480;old_locus_tag=C9E94_13810
NZ_PYJR01000097.1	Protein Homology	CDS	18517	19374	.	-	0	ID=cds-WP_000640013.1;Parent=gene-C9E94_RS13480;Dbxref=GenBank:WP_000640013.1;Name=WP_000640013.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=C9E94_RS13480;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000640013.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	19389	20147	.	-	.	ID=gene-C9E94_RS13485;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=C9E94_RS13485;old_locus_tag=C9E94_13815
NZ_PYJR01000097.1	Protein Homology	CDS	19389	20147	.	-	0	ID=cds-WP_000979134.1;Parent=gene-C9E94_RS13485;Dbxref=GenBank:WP_000979134.1;Name=WP_000979134.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461250.1;locus_tag=C9E94_RS13485;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_000979134.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	20144	21814	.	-	.	ID=gene-C9E94_RS13490;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=C9E94_RS13490;old_locus_tag=C9E94_13820
NZ_PYJR01000097.1	Protein Homology	CDS	20144	21814	.	-	0	ID=cds-WP_000116395.1;Parent=gene-C9E94_RS13490;Dbxref=GenBank:WP_000116395.1;Name=WP_000116395.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461251.1;locus_tag=C9E94_RS13490;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_000116395.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	21900	23195	.	-	.	ID=gene-C9E94_RS13495;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=C9E94_RS13495;old_locus_tag=C9E94_13825
NZ_PYJR01000097.1	Protein Homology	CDS	21900	23195	.	-	0	ID=cds-WP_000555674.1;Parent=gene-C9E94_RS13495;Dbxref=GenBank:WP_000555674.1;Name=WP_000555674.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461252.1;locus_tag=C9E94_RS13495;product=isochorismate synthase MenF;protein_id=WP_000555674.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	23296	23601	.	-	.	ID=gene-C9E94_RS13500;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=C9E94_RS13500;old_locus_tag=C9E94_13830
NZ_PYJR01000097.1	Protein Homology	CDS	23296	23601	.	-	0	ID=cds-WP_001519663.1;Parent=gene-C9E94_RS13500;Dbxref=GenBank:WP_001519663.1;Name=WP_001519663.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=C9E94_RS13500;product=stress response protein ElaB;protein_id=WP_001519663.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	23656	24117	.	-	.	ID=gene-C9E94_RS13505;Name=C9E94_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13505;old_locus_tag=C9E94_13835
NZ_PYJR01000097.1	Protein Homology	CDS	23656	24117	.	-	0	ID=cds-WP_000568155.1;Parent=gene-C9E94_RS13505;Dbxref=GenBank:WP_000568155.1;Name=WP_000568155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461254.1;locus_tag=C9E94_RS13505;product=GNAT family N-acetyltransferase;protein_id=WP_000568155.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	24178	25095	.	+	.	ID=gene-C9E94_RS13510;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=C9E94_RS13510;old_locus_tag=C9E94_13840
NZ_PYJR01000097.1	Protein Homology	CDS	24178	25095	.	+	0	ID=cds-WP_000419093.1;Parent=gene-C9E94_RS13510;Dbxref=GenBank:WP_000419093.1;Name=WP_000419093.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rbn;go_function=RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461255.1;locus_tag=C9E94_RS13510;product=ribonuclease BN;protein_id=WP_000419093.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	25161	26162	.	+	.	ID=gene-C9E94_RS13515;Name=C9E94_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13515;old_locus_tag=C9E94_13845
NZ_PYJR01000097.1	Protein Homology	CDS	25161	26162	.	+	0	ID=cds-WP_135401081.1;Parent=gene-C9E94_RS13515;Dbxref=GenBank:WP_135401081.1;Name=WP_135401081.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461256.1;locus_tag=C9E94_RS13515;product=chemotaxis protein;protein_id=WP_135401081.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	26203	27984	.	-	.	ID=gene-C9E94_RS13520;Name=C9E94_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13520;old_locus_tag=C9E94_13850
NZ_PYJR01000097.1	Protein Homology	CDS	26203	27984	.	-	0	ID=cds-WP_135401082.1;Parent=gene-C9E94_RS13520;Dbxref=GenBank:WP_135401082.1;Name=WP_135401082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001522359.1;locus_tag=C9E94_RS13520;product=vWA domain-containing protein;protein_id=WP_135401082.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	28453	28611	.	+	.	ID=gene-C9E94_RS13525;Name=C9E94_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13525
NZ_PYJR01000097.1	Protein Homology	CDS	28453	28611	.	+	0	ID=cds-WP_077221223.1;Parent=gene-C9E94_RS13525;Dbxref=GenBank:WP_077221223.1;Name=WP_077221223.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020544.6;locus_tag=C9E94_RS13525;product=DUF1877 family protein;protein_id=WP_077221223.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	28989	30446	.	-	.	ID=gene-C9E94_RS13530;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=C9E94_RS13530;old_locus_tag=C9E94_13855
NZ_PYJR01000097.1	Protein Homology	CDS	28989	30446	.	-	0	ID=cds-WP_000156667.1;Parent=gene-C9E94_RS13530;Dbxref=GenBank:WP_000156667.1;Name=WP_000156667.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=C9E94_RS13530;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_000156667.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	30453	31982	.	-	.	ID=gene-C9E94_RS13535;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=C9E94_RS13535;old_locus_tag=C9E94_13860
NZ_PYJR01000097.1	Protein Homology	CDS	30453	31982	.	-	0	ID=cds-WP_023241871.1;Parent=gene-C9E94_RS13535;Dbxref=GenBank:WP_023241871.1;Name=WP_023241871.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=C9E94_RS13535;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_023241871.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	32296	34137	.	-	.	ID=gene-C9E94_RS13540;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=C9E94_RS13540;old_locus_tag=C9E94_13870
NZ_PYJR01000097.1	Protein Homology	CDS	32296	34137	.	-	0	ID=cds-WP_001056582.1;Parent=gene-C9E94_RS13540;Dbxref=GenBank:WP_001056582.1;Name=WP_001056582.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=C9E94_RS13540;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_001056582.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	34134	34436	.	-	.	ID=gene-C9E94_RS13545;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=C9E94_RS13545;old_locus_tag=C9E94_13875
NZ_PYJR01000097.1	Protein Homology	CDS	34134	34436	.	-	0	ID=cds-WP_000612687.1;Parent=gene-C9E94_RS13545;Dbxref=GenBank:WP_000612687.1;Name=WP_000612687.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=C9E94_RS13545;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_000612687.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	34433	34987	.	-	.	ID=gene-C9E94_RS13550;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=C9E94_RS13550;old_locus_tag=C9E94_13880
NZ_PYJR01000097.1	Protein Homology	CDS	34433	34987	.	-	0	ID=cds-WP_000393522.1;Parent=gene-C9E94_RS13550;Dbxref=GenBank:WP_000393522.1;Name=WP_000393522.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461262.1;locus_tag=C9E94_RS13550;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_000393522.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	34998	35540	.	-	.	ID=gene-C9E94_RS13555;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=C9E94_RS13555;old_locus_tag=C9E94_13885
NZ_PYJR01000097.1	Protein Homology	CDS	34998	35540	.	-	0	ID=cds-WP_000172747.1;Parent=gene-C9E94_RS13555;Dbxref=GenBank:WP_000172747.1;Name=WP_000172747.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=C9E94_RS13555;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_000172747.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	35555	36532	.	-	.	ID=gene-C9E94_RS13560;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=C9E94_RS13560;old_locus_tag=C9E94_13890
NZ_PYJR01000097.1	Protein Homology	CDS	35555	36532	.	-	0	ID=cds-WP_064047214.1;Parent=gene-C9E94_RS13560;Dbxref=GenBank:WP_064047214.1;Name=WP_064047214.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=C9E94_RS13560;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_064047214.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	36529	39255	.	-	.	ID=gene-C9E94_RS13565;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=C9E94_RS13565;old_locus_tag=C9E94_13895
NZ_PYJR01000097.1	Protein Homology	CDS	36529	39255	.	-	0	ID=cds-WP_135401083.1;Parent=gene-C9E94_RS13565;Dbxref=GenBank:WP_135401083.1;Name=WP_135401083.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=C9E94_RS13565;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_135401083.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	39286	40623	.	-	.	ID=gene-C9E94_RS13570;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=C9E94_RS13570;old_locus_tag=C9E94_13900
NZ_PYJR01000097.1	Protein Homology	CDS	39286	40623	.	-	0	ID=cds-WP_000800048.1;Parent=gene-C9E94_RS13570;Dbxref=GenBank:WP_000800048.1;Name=WP_000800048.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461266.1;locus_tag=C9E94_RS13570;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_000800048.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	40620	41120	.	-	.	ID=gene-C9E94_RS13575;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=C9E94_RS13575;old_locus_tag=C9E94_13905
NZ_PYJR01000097.1	Protein Homology	CDS	40620	41120	.	-	0	ID=cds-WP_000545038.1;Parent=gene-C9E94_RS13575;Dbxref=GenBank:WP_000545038.1;Name=WP_000545038.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461267.1;locus_tag=C9E94_RS13575;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_000545038.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	41123	42925	.	-	.	ID=gene-C9E94_RS13580;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=C9E94_RS13580;old_locus_tag=C9E94_13910
NZ_PYJR01000097.1	Protein Homology	CDS	41123	42925	.	-	0	ID=cds-WP_000247855.1;Parent=gene-C9E94_RS13580;Dbxref=GenBank:WP_000247855.1;Name=WP_000247855.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461268.1;locus_tag=C9E94_RS13580;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_000247855.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	43012	43674	.	-	.	ID=gene-C9E94_RS13585;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=C9E94_RS13585;old_locus_tag=C9E94_13915
NZ_PYJR01000097.1	Protein Homology	CDS	43012	43674	.	-	0	ID=cds-WP_000386728.1;Parent=gene-C9E94_RS13585;Dbxref=GenBank:WP_000386728.1;Name=WP_000386728.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461269.1;locus_tag=C9E94_RS13585;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_000386728.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	43690	44133	.	-	.	ID=gene-C9E94_RS13590;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=C9E94_RS13590;old_locus_tag=C9E94_13920
NZ_PYJR01000097.1	Protein Homology	CDS	43690	44133	.	-	0	ID=cds-WP_000062993.1;Parent=gene-C9E94_RS13590;Dbxref=GenBank:WP_000062993.1;Name=WP_000062993.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461270.1;locus_tag=C9E94_RS13590;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_000062993.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	44528	44680	.	-	.	ID=gene-C9E94_RS13595;Name=C9E94_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13595;old_locus_tag=C9E94_13925
NZ_PYJR01000097.1	Protein Homology	CDS	44528	44680	.	-	0	ID=cds-WP_001650173.1;Parent=gene-C9E94_RS13595;Dbxref=GenBank:WP_001650173.1;Name=WP_001650173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461271.1;locus_tag=C9E94_RS13595;product=STM2329 family putative cytoplasmic protein;protein_id=WP_001650173.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	44760	45698	.	-	.	ID=gene-C9E94_RS13600;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=C9E94_RS13600;old_locus_tag=C9E94_13930
NZ_PYJR01000097.1	Protein Homology	CDS	44760	45698	.	-	0	ID=cds-WP_000606288.1;Parent=gene-C9E94_RS13600;Dbxref=GenBank:WP_000606288.1;Name=WP_000606288.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461272.1;locus_tag=C9E94_RS13600;product=transcriptional regulator LrhA;protein_id=WP_000606288.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	46630	47844	.	+	.	ID=gene-C9E94_RS13610;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=C9E94_RS13610;old_locus_tag=C9E94_13940
NZ_PYJR01000097.1	Protein Homology	CDS	46630	47844	.	+	0	ID=cds-WP_000074540.1;Parent=gene-C9E94_RS13610;Dbxref=GenBank:WP_000074540.1;Name=WP_000074540.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461273.1;locus_tag=C9E94_RS13610;product=alanine transaminase AlaA;protein_id=WP_000074540.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	47938	48537	.	+	.	ID=gene-C9E94_RS13615;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=C9E94_RS13615;old_locus_tag=C9E94_13945
NZ_PYJR01000097.1	Protein Homology	CDS	47938	48537	.	+	0	ID=cds-WP_000813882.1;Parent=gene-C9E94_RS13615;Dbxref=GenBank:WP_000813882.1;Name=WP_000813882.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461274.1;locus_tag=C9E94_RS13615;product=5'-deoxynucleotidase;protein_id=WP_000813882.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	48628	50454	.	-	.	ID=gene-C9E94_RS13620;Name=C9E94_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13620;old_locus_tag=C9E94_13950
NZ_PYJR01000097.1	Protein Homology	CDS	48628	50454	.	-	0	ID=cds-WP_001012856.1;Parent=gene-C9E94_RS13620;Dbxref=GenBank:WP_001012856.1;Name=WP_001012856.1;Ontology_term=GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=C9E94_RS13620;product=SLC13 family permease;protein_id=WP_001012856.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	50531	51208	.	-	.	ID=gene-C9E94_RS13625;Name=C9E94_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13625;old_locus_tag=C9E94_13955
NZ_PYJR01000097.1	Protein Homology	CDS	50531	51208	.	-	0	ID=cds-WP_014343872.1;Parent=gene-C9E94_RS13625;Dbxref=GenBank:WP_014343872.1;Name=WP_014343872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461276.3;locus_tag=C9E94_RS13625;product=sugar phosphatase;protein_id=WP_014343872.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	51201	51695	.	-	.	ID=gene-C9E94_RS13630;Name=C9E94_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13630;old_locus_tag=C9E94_13960
NZ_PYJR01000097.1	Protein Homology	CDS	51201	51695	.	-	0	ID=cds-WP_000426135.1;Parent=gene-C9E94_RS13630;Dbxref=GenBank:WP_000426135.1;Name=WP_000426135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=C9E94_RS13630;product=YfbU family protein;protein_id=WP_000426135.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	51778	52233	.	-	.	ID=gene-C9E94_RS13635;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=C9E94_RS13635;old_locus_tag=C9E94_13965
NZ_PYJR01000097.1	Protein Homology	CDS	51778	52233	.	-	0	ID=cds-WP_000106617.1;Parent=gene-C9E94_RS13635;Dbxref=GenBank:WP_000106617.1;Name=WP_000106617.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=C9E94_RS13635;product=terminus macrodomain insulation protein YfbV;protein_id=WP_000106617.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	52573	53775	.	+	.	ID=gene-C9E94_RS13645;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=C9E94_RS13645;old_locus_tag=C9E94_13970
NZ_PYJR01000097.1	Protein Homology	CDS	52573	53775	.	+	0	ID=cds-WP_000095689.1;Parent=gene-C9E94_RS13645;Dbxref=GenBank:WP_000095689.1;Name=WP_000095689.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=C9E94_RS13645;product=acetate kinase;protein_id=WP_000095689.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	53852	55996	.	+	.	ID=gene-C9E94_RS13650;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=C9E94_RS13650;old_locus_tag=C9E94_13975
NZ_PYJR01000097.1	Protein Homology	CDS	53852	55996	.	+	0	ID=cds-WP_000086692.1;Parent=gene-C9E94_RS13650;Dbxref=GenBank:WP_000086692.1;Name=WP_000086692.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461280.1;locus_tag=C9E94_RS13650;product=phosphate acetyltransferase;protein_id=WP_000086692.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	56214	57734	.	+	.	ID=gene-C9E94_RS13655;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=C9E94_RS13655;old_locus_tag=C9E94_13980
NZ_PYJR01000097.1	Protein Homology	CDS	56214	57734	.	+	0	ID=cds-WP_000117932.1;Parent=gene-C9E94_RS13655;Dbxref=GenBank:WP_000117932.1;Name=WP_000117932.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461281.1;locus_tag=C9E94_RS13655;product=putative basic amino acid antiporter YfcC;protein_id=WP_000117932.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	57783	58736	.	-	.	ID=gene-C9E94_RS13660;Name=C9E94_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13660;old_locus_tag=C9E94_13985
NZ_PYJR01000097.1	Protein Homology	CDS	57783	58736	.	-	0	ID=cds-WP_000593026.1;Parent=gene-C9E94_RS13660;Dbxref=GenBank:WP_000593026.1;Name=WP_000593026.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461282.1;locus_tag=C9E94_RS13660;product=transketolase family protein;protein_id=WP_000593026.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	58729	59559	.	-	.	ID=gene-C9E94_RS13665;Name=C9E94_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13665;old_locus_tag=C9E94_13990
NZ_PYJR01000097.1	Protein Homology	CDS	58729	59559	.	-	0	ID=cds-WP_001103267.1;Parent=gene-C9E94_RS13665;Dbxref=GenBank:WP_001103267.1;Name=WP_001103267.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=C9E94_RS13665;product=transketolase;protein_id=WP_001103267.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	59556	60947	.	-	.	ID=gene-C9E94_RS13670;Name=C9E94_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13670;old_locus_tag=C9E94_13995
NZ_PYJR01000097.1	Protein Homology	CDS	59556	60947	.	-	0	ID=cds-WP_001522266.1;Parent=gene-C9E94_RS13670;Dbxref=GenBank:WP_001522266.1;Name=WP_001522266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461284.3;locus_tag=C9E94_RS13670;product=PTS ascorbate transporter subunit IIC;protein_id=WP_001522266.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	60968	61240	.	-	.	ID=gene-C9E94_RS13675;Name=C9E94_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13675;old_locus_tag=C9E94_14000
NZ_PYJR01000097.1	Protein Homology	CDS	60968	61240	.	-	0	ID=cds-WP_000699818.1;Parent=gene-C9E94_RS13675;Dbxref=GenBank:WP_000699818.1;Name=WP_000699818.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461285.1;locus_tag=C9E94_RS13675;product=PTS sugar transporter subunit IIB;protein_id=WP_000699818.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	61321	61764	.	-	.	ID=gene-C9E94_RS13680;Name=C9E94_RS13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13680;old_locus_tag=C9E94_14005
NZ_PYJR01000097.1	Protein Homology	CDS	61321	61764	.	-	0	ID=cds-WP_000901810.1;Parent=gene-C9E94_RS13680;Dbxref=GenBank:WP_000901810.1;Name=WP_000901810.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461286.1;locus_tag=C9E94_RS13680;product=PTS sugar transporter subunit IIA;protein_id=WP_000901810.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	62017	63036	.	+	.	ID=gene-C9E94_RS13690;Name=C9E94_RS13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13690;old_locus_tag=C9E94_14015
NZ_PYJR01000097.1	Protein Homology	CDS	62017	63036	.	+	0	ID=cds-WP_000026949.1;Parent=gene-C9E94_RS13690;Dbxref=GenBank:WP_000026949.1;Name=WP_000026949.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=C9E94_RS13690;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000026949.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	63042	63596	.	-	.	ID=gene-C9E94_RS13695;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=C9E94_RS13695;old_locus_tag=C9E94_14020
NZ_PYJR01000097.1	Protein Homology	CDS	63042	63596	.	-	0	ID=cds-WP_135401084.1;Parent=gene-C9E94_RS13695;Dbxref=GenBank:WP_135401084.1;Name=WP_135401084.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461288.1;locus_tag=C9E94_RS13695;product=NUDIX hydrolase YfcD;protein_id=WP_135401084.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	63653	64204	.	-	.	ID=gene-C9E94_RS13700;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=C9E94_RS13700;old_locus_tag=C9E94_14025
NZ_PYJR01000097.1	Protein Homology	CDS	63653	64204	.	-	0	ID=cds-WP_080190821.1;Parent=gene-C9E94_RS13700;Dbxref=GenBank:WP_080190821.1;Name=WP_080190821.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461289.1;locus_tag=C9E94_RS13700;product=phosphodiesterase;protein_id=WP_080190821.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	64260	64904	.	-	.	ID=gene-C9E94_RS13705;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=C9E94_RS13705;old_locus_tag=C9E94_14030
NZ_PYJR01000097.1	Protein Homology	CDS	64260	64904	.	-	0	ID=cds-WP_000043010.1;Parent=gene-C9E94_RS13705;Dbxref=GenBank:WP_000043010.1;Name=WP_000043010.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461290.1;locus_tag=C9E94_RS13705;product=glutathione transferase;protein_id=WP_000043010.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	65047	65694	.	+	.	ID=gene-C9E94_RS13710;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=C9E94_RS13710;old_locus_tag=C9E94_14035
NZ_PYJR01000097.1	Protein Homology	CDS	65047	65694	.	+	0	ID=cds-WP_000566562.1;Parent=gene-C9E94_RS13710;Dbxref=GenBank:WP_000566562.1;Name=WP_000566562.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461291.1;locus_tag=C9E94_RS13710;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_000566562.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	65820	66713	.	+	.	ID=gene-C9E94_RS13715;Name=C9E94_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13715;old_locus_tag=C9E94_14040
NZ_PYJR01000097.1	Protein Homology	CDS	65820	66713	.	+	0	ID=cds-WP_080190820.1;Parent=gene-C9E94_RS13715;Dbxref=GenBank:WP_080190820.1;Name=WP_080190820.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461292.1;locus_tag=C9E94_RS13715;product=TIGR01777 family oxidoreductase;protein_id=WP_080190820.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	66765	67538	.	-	.	ID=gene-C9E94_RS13720;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=C9E94_RS13720;old_locus_tag=C9E94_14045
NZ_PYJR01000097.1	Protein Homology	CDS	66765	67538	.	-	0	ID=cds-WP_001293591.1;Parent=gene-C9E94_RS13720;Dbxref=GenBank:WP_001293591.1;Name=WP_001293591.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=C9E94_RS13720;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_001293591.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	67552	68259	.	-	.	ID=gene-C9E94_RS13725;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=C9E94_RS13725;old_locus_tag=C9E94_14050
NZ_PYJR01000097.1	Protein Homology	CDS	67552	68259	.	-	0	ID=cds-WP_000569771.1;Parent=gene-C9E94_RS13725;Dbxref=GenBank:WP_000569771.1;Name=WP_000569771.1;gbkey=CDS;gene=hisM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461294.1;locus_tag=C9E94_RS13725;product=histidine ABC transporter permease HisM;protein_id=WP_000569771.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	68256	68942	.	-	.	ID=gene-C9E94_RS13730;Name=C9E94_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13730;old_locus_tag=C9E94_14055
NZ_PYJR01000097.1	Protein Homology	CDS	68256	68942	.	-	0	ID=cds-WP_000965498.1;Parent=gene-C9E94_RS13730;Dbxref=GenBank:WP_000965498.1;Name=WP_000965498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=C9E94_RS13730;product=histidine ABC transporter permease HisQ;protein_id=WP_000965498.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	69123	69905	.	-	.	ID=gene-C9E94_RS13735;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=C9E94_RS13735;old_locus_tag=C9E94_14060
NZ_PYJR01000097.1	Protein Homology	CDS	69123	69905	.	-	0	ID=cds-WP_000731868.1;Parent=gene-C9E94_RS13735;Dbxref=GenBank:WP_000731868.1;Name=WP_000731868.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461296.1;locus_tag=C9E94_RS13735;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_000731868.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	70143	70925	.	-	.	ID=gene-C9E94_RS13740;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=C9E94_RS13740;old_locus_tag=C9E94_14065
NZ_PYJR01000097.1	Protein Homology	CDS	70143	70925	.	-	0	ID=cds-WP_135401085.1;Parent=gene-C9E94_RS13740;Dbxref=GenBank:WP_135401085.1;Name=WP_135401085.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461297.1;locus_tag=C9E94_RS13740;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_135401085.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	71214	71783	.	-	.	ID=gene-C9E94_RS13750;Name=C9E94_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13750;old_locus_tag=C9E94_14075
NZ_PYJR01000097.1	Protein Homology	CDS	71214	71783	.	-	0	ID=cds-WP_000825682.1;Parent=gene-C9E94_RS13750;Dbxref=GenBank:WP_000825682.1;Name=WP_000825682.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461298.1;locus_tag=C9E94_RS13750;product=UbiX family flavin prenyltransferase;protein_id=WP_000825682.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	71810	73216	.	-	.	ID=gene-C9E94_RS13755;Name=C9E94_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13755;old_locus_tag=C9E94_14080
NZ_PYJR01000097.1	Protein Homology	CDS	71810	73216	.	-	0	ID=cds-WP_000380356.1;Parent=gene-C9E94_RS13755;Dbxref=GenBank:WP_000380356.1;Name=WP_000380356.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461299.1;locus_tag=C9E94_RS13755;product=amino acid permease;protein_id=WP_000380356.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	73280	74383	.	-	.	ID=gene-C9E94_RS13760;Name=C9E94_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13760;old_locus_tag=C9E94_14085
NZ_PYJR01000097.1	Protein Homology	CDS	73280	74383	.	-	0	ID=cds-WP_000281907.1;Parent=gene-C9E94_RS13760;Dbxref=GenBank:WP_000281907.1;Name=WP_000281907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461300.1;locus_tag=C9E94_RS13760;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=WP_000281907.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	74385	75806	.	-	.	ID=gene-C9E94_RS13765;Name=C9E94_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13765;old_locus_tag=C9E94_14090
NZ_PYJR01000097.1	Protein Homology	CDS	74385	75806	.	-	0	ID=cds-WP_000072512.1;Parent=gene-C9E94_RS13765;Dbxref=GenBank:WP_000072512.1;Name=WP_000072512.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461301.1;locus_tag=C9E94_RS13765;product=APC family permease;protein_id=WP_000072512.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	75897	77294	.	-	.	ID=gene-C9E94_RS13770;Name=C9E94_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13770;old_locus_tag=C9E94_14095
NZ_PYJR01000097.1	Protein Homology	CDS	75897	77294	.	-	0	ID=cds-WP_000132306.1;Parent=gene-C9E94_RS13770;Dbxref=GenBank:WP_000132306.1;Name=WP_000132306.1;Ontology_term=GO:0016831,GO:0030170;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461302.1;locus_tag=C9E94_RS13770;product=diaminopimelate decarboxylase family protein;protein_id=WP_000132306.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	77505	78932	.	+	.	ID=gene-C9E94_RS13775;Name=C9E94_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13775;old_locus_tag=C9E94_14100
NZ_PYJR01000097.1	Protein Homology	CDS	77505	78932	.	+	0	ID=cds-WP_000168925.1;Parent=gene-C9E94_RS13775;Dbxref=GenBank:WP_000168925.1;Name=WP_000168925.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461303.1;locus_tag=C9E94_RS13775;product=sigma-54 interaction domain-containing protein;protein_id=WP_000168925.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	78968	80485	.	-	.	ID=gene-C9E94_RS13780;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=C9E94_RS13780;old_locus_tag=C9E94_14105
NZ_PYJR01000097.1	Protein Homology	CDS	78968	80485	.	-	0	ID=cds-WP_000334205.1;Parent=gene-C9E94_RS13780;Dbxref=GenBank:WP_000334205.1;Name=WP_000334205.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=C9E94_RS13780;product=amidophosphoribosyltransferase;protein_id=WP_000334205.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	80523	81011	.	-	.	ID=gene-C9E94_RS13785;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=C9E94_RS13785;old_locus_tag=C9E94_14110
NZ_PYJR01000097.1	Protein Homology	CDS	80523	81011	.	-	0	ID=cds-WP_000262102.1;Parent=gene-C9E94_RS13785;Dbxref=GenBank:WP_000262102.1;Name=WP_000262102.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461305.1;locus_tag=C9E94_RS13785;product=colicin V production protein;protein_id=WP_000262102.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	81322	81996	.	-	.	ID=gene-C9E94_RS13790;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=C9E94_RS13790;old_locus_tag=C9E94_14115
NZ_PYJR01000097.1	Protein Homology	CDS	81322	81996	.	-	0	ID=cds-WP_000157031.1;Parent=gene-C9E94_RS13790;Dbxref=GenBank:WP_000157031.1;Name=WP_000157031.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461306.1;locus_tag=C9E94_RS13790;product=cell division protein DedD;protein_id=WP_000157031.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	81986	83254	.	-	.	ID=gene-C9E94_RS13795;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=C9E94_RS13795;old_locus_tag=C9E94_14120
NZ_PYJR01000097.1	Protein Homology	CDS	81986	83254	.	-	0	ID=cds-WP_135401086.1;Parent=gene-C9E94_RS13795;Dbxref=GenBank:WP_135401086.1;Name=WP_135401086.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461307.1;locus_tag=C9E94_RS13795;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_135401086.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	83322	84236	.	-	.	ID=gene-C9E94_RS13800;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=C9E94_RS13800;old_locus_tag=C9E94_14125
NZ_PYJR01000097.1	Protein Homology	CDS	83322	84236	.	-	0	ID=cds-WP_000118383.1;Parent=gene-C9E94_RS13800;Dbxref=GenBank:WP_000118383.1;Name=WP_000118383.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461308.1;locus_tag=C9E94_RS13800;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_000118383.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	84386	85045	.	-	.	ID=gene-C9E94_RS13805;Name=C9E94_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13805;old_locus_tag=C9E94_14130
NZ_PYJR01000097.1	Protein Homology	CDS	84386	85045	.	-	0	ID=cds-WP_000364318.1;Parent=gene-C9E94_RS13805;Dbxref=GenBank:WP_000364318.1;Name=WP_000364318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461309.1;locus_tag=C9E94_RS13805;product=DedA family protein;protein_id=WP_000364318.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	85094	85906	.	-	.	ID=gene-C9E94_RS13810;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=C9E94_RS13810;old_locus_tag=C9E94_14135
NZ_PYJR01000097.1	Protein Homology	CDS	85094	85906	.	-	0	ID=cds-WP_000016631.1;Parent=gene-C9E94_RS13810;Dbxref=GenBank:WP_000016631.1;Name=WP_000016631.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461310.1;locus_tag=C9E94_RS13810;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_000016631.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	85906	86919	.	-	.	ID=gene-C9E94_RS13815;Name=C9E94_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13815;old_locus_tag=C9E94_14140
NZ_PYJR01000097.1	Protein Homology	CDS	85906	86919	.	-	0	ID=cds-WP_135370502.1;Parent=gene-C9E94_RS13815;Dbxref=GenBank:WP_135370502.1;Name=WP_135370502.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461311.1;locus_tag=C9E94_RS13815;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_135370502.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	86987	88123	.	-	.	ID=gene-C9E94_RS13820;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=C9E94_RS13820;old_locus_tag=C9E94_14145
NZ_PYJR01000097.1	Protein Homology	CDS	86987	88123	.	-	0	ID=cds-WP_000699178.1;Parent=gene-C9E94_RS13820;Dbxref=GenBank:WP_000699178.1;Name=WP_000699178.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461312.1;locus_tag=C9E94_RS13820;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_000699178.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	88227	89228	.	+	.	ID=gene-C9E94_RS13825;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=C9E94_RS13825;old_locus_tag=C9E94_14150
NZ_PYJR01000097.1	Protein Homology	CDS	88227	89228	.	+	0	ID=cds-WP_000553395.1;Parent=gene-C9E94_RS13825;Dbxref=GenBank:WP_000553395.1;Name=WP_000553395.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461313.1;locus_tag=C9E94_RS13825;product=flagella biosynthesis regulator Flk;protein_id=WP_000553395.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	89225	90403	.	-	.	ID=gene-C9E94_RS13830;Name=C9E94_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13830;old_locus_tag=C9E94_14155
NZ_PYJR01000097.1	Protein Homology	CDS	89225	90403	.	-	0	ID=cds-WP_000127720.1;Parent=gene-C9E94_RS13830;Dbxref=GenBank:WP_000127720.1;Name=WP_000127720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461314.1;locus_tag=C9E94_RS13830;product=MFS transporter;protein_id=WP_000127720.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	90582	90956	.	-	.	ID=gene-C9E94_RS13835;Name=C9E94_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13835;old_locus_tag=C9E94_14160
NZ_PYJR01000097.1	Protein Homology	CDS	90582	90956	.	-	0	ID=cds-WP_001051266.1;Parent=gene-C9E94_RS13835;Dbxref=GenBank:WP_001051266.1;Name=WP_001051266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461315.1;locus_tag=C9E94_RS13835;product=hypothetical protein;protein_id=WP_001051266.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	91129	91377	.	+	.	ID=gene-C9E94_RS13840;Name=C9E94_RS13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13840;old_locus_tag=C9E94_14165
NZ_PYJR01000097.1	Protein Homology	CDS	91129	91377	.	+	0	ID=cds-WP_000433425.1;Parent=gene-C9E94_RS13840;Dbxref=GenBank:WP_000433425.1;Name=WP_000433425.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461316.1;locus_tag=C9E94_RS13840;product=helix-turn-helix domain-containing protein;protein_id=WP_000433425.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	91546	91914	.	+	.	ID=gene-C9E94_RS13845;Name=C9E94_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13845;old_locus_tag=C9E94_14170
NZ_PYJR01000097.1	Protein Homology	CDS	91546	91914	.	+	0	ID=cds-WP_135401087.1;Parent=gene-C9E94_RS13845;Dbxref=GenBank:WP_135401087.1;Name=WP_135401087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461317.1;locus_tag=C9E94_RS13845;product=NlpC/P60 family protein;protein_id=WP_135401087.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	91914	92432	.	+	.	ID=gene-C9E94_RS13850;Name=C9E94_RS13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13850;old_locus_tag=C9E94_14175
NZ_PYJR01000097.1	Protein Homology	CDS	91914	92432	.	+	0	ID=cds-WP_001522336.1;Parent=gene-C9E94_RS13850;Dbxref=GenBank:WP_001522336.1;Name=WP_001522336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461318.1;locus_tag=C9E94_RS13850;product=YbjP/YqhG family protein;protein_id=WP_001522336.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	92499	93155	.	-	.	ID=gene-C9E94_RS13855;Name=C9E94_RS13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13855;old_locus_tag=C9E94_14180
NZ_PYJR01000097.1	Protein Homology	CDS	92499	93155	.	-	0	ID=cds-WP_001142910.1;Parent=gene-C9E94_RS13855;Dbxref=GenBank:WP_001142910.1;Name=WP_001142910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461319.1;locus_tag=C9E94_RS13855;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_001142910.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	93253	94467	.	-	.	ID=gene-C9E94_RS13860;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=C9E94_RS13860;old_locus_tag=C9E94_14185
NZ_PYJR01000097.1	Protein Homology	CDS	93253	94467	.	-	0	ID=cds-WP_000817161.1;Parent=gene-C9E94_RS13860;Dbxref=GenBank:WP_000817161.1;Name=WP_000817161.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461320.1;locus_tag=C9E94_RS13860;product=beta-ketoacyl-ACP synthase I;protein_id=WP_000817161.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	94627	96627	.	+	.	ID=gene-C9E94_RS13865;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=C9E94_RS13865;old_locus_tag=C9E94_14190
NZ_PYJR01000097.1	Protein Homology	CDS	94627	96627	.	+	0	ID=cds-WP_167853651.1;Parent=gene-C9E94_RS13865;Dbxref=GenBank:WP_167853651.1;Name=WP_167853651.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540542.1;locus_tag=C9E94_RS13865;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_167853651.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	96679	96954	.	-	.	ID=gene-C9E94_RS13870;Name=C9E94_RS13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13870;old_locus_tag=C9E94_14195
NZ_PYJR01000097.1	Protein Homology	CDS	96679	96954	.	-	0	ID=cds-WP_002954121.1;Parent=gene-C9E94_RS13870;Dbxref=GenBank:WP_002954121.1;Name=WP_002954121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461322.1;locus_tag=C9E94_RS13870;product=YfcL family protein;protein_id=WP_002954121.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	96987	97535	.	-	.	ID=gene-C9E94_RS13875;Name=C9E94_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13875;old_locus_tag=C9E94_14200
NZ_PYJR01000097.1	Protein Homology	CDS	96987	97535	.	-	0	ID=cds-WP_001066345.1;Parent=gene-C9E94_RS13875;Dbxref=GenBank:WP_001066345.1;Name=WP_001066345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461323.1;locus_tag=C9E94_RS13875;product=elongation factor P hydroxylase;protein_id=WP_001066345.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	97535	98344	.	-	.	ID=gene-C9E94_RS13880;Name=C9E94_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13880;old_locus_tag=C9E94_14205
NZ_PYJR01000097.1	Protein Homology	CDS	97535	98344	.	-	0	ID=cds-WP_000368599.1;Parent=gene-C9E94_RS13880;Dbxref=GenBank:WP_000368599.1;Name=WP_000368599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461324.1;locus_tag=C9E94_RS13880;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000368599.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	98344	99168	.	-	.	ID=gene-C9E94_RS13885;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=C9E94_RS13885;old_locus_tag=C9E94_14210
NZ_PYJR01000097.1	Protein Homology	CDS	98344	99168	.	-	0	ID=cds-WP_000750429.1;Parent=gene-C9E94_RS13885;Dbxref=GenBank:WP_000750429.1;Name=WP_000750429.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461325.1;locus_tag=C9E94_RS13885;product=penicillin-insensitive murein endopeptidase;protein_id=WP_000750429.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	99172	100257	.	-	.	ID=gene-C9E94_RS13890;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=C9E94_RS13890;old_locus_tag=C9E94_14215
NZ_PYJR01000097.1	Protein Homology	CDS	99172	100257	.	-	0	ID=cds-WP_000918457.1;Parent=gene-C9E94_RS13890;Dbxref=GenBank:WP_000918457.1;Name=WP_000918457.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=C9E94_RS13890;product=chorismate synthase;protein_id=WP_000918457.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	100293	101225	.	-	.	ID=gene-C9E94_RS13895;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=C9E94_RS13895;old_locus_tag=C9E94_14220
NZ_PYJR01000097.1	Protein Homology	CDS	100293	101225	.	-	0	ID=cds-WP_001542329.1;Parent=gene-C9E94_RS13895;Dbxref=GenBank:WP_001542329.1;Name=WP_001542329.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=C9E94_RS13895;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_001542329.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	101391	101942	.	+	.	ID=gene-C9E94_RS13900;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=C9E94_RS13900;old_locus_tag=C9E94_14225
NZ_PYJR01000097.1	Protein Homology	CDS	101391	101942	.	+	0	ID=cds-WP_000730794.1;Parent=gene-C9E94_RS13900;Dbxref=GenBank:WP_000730794.1;Name=WP_000730794.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461328.1;locus_tag=C9E94_RS13900;product=endonuclease SmrB;protein_id=WP_000730794.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	102042	102527	.	-	.	ID=gene-C9E94_RS13905;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=C9E94_RS13905;old_locus_tag=C9E94_14230
NZ_PYJR01000097.1	Protein Homology	CDS	102042	102527	.	-	0	ID=cds-WP_001195800.1;Parent=gene-C9E94_RS13905;Dbxref=GenBank:WP_001195800.1;Name=WP_001195800.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=C9E94_RS13905;product=phosphohistidine phosphatase SixA;protein_id=WP_001195800.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	102736	104883	.	-	.	ID=gene-C9E94_RS13910;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=C9E94_RS13910;old_locus_tag=C9E94_14235
NZ_PYJR01000097.1	Protein Homology	CDS	102736	104883	.	-	0	ID=cds-WP_000214135.1;Parent=gene-C9E94_RS13910;Dbxref=GenBank:WP_000214135.1;Name=WP_000214135.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=(3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461330.1;locus_tag=C9E94_RS13910;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_000214135.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	104883	106193	.	-	.	ID=gene-C9E94_RS13915;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=C9E94_RS13915;old_locus_tag=C9E94_14240
NZ_PYJR01000097.1	Protein Homology	CDS	104883	106193	.	-	0	ID=cds-WP_135401089.1;Parent=gene-C9E94_RS13915;Dbxref=GenBank:WP_135401089.1;Name=WP_135401089.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadI;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461331.2;locus_tag=C9E94_RS13915;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_135401089.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	106371	106655	.	-	.	ID=gene-C9E94_RS13920;Name=C9E94_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13920;old_locus_tag=C9E94_14245
NZ_PYJR01000097.1	Protein Homology	CDS	106371	106655	.	-	0	ID=cds-WP_000030904.1;Parent=gene-C9E94_RS13920;Dbxref=GenBank:WP_000030904.1;Name=WP_000030904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=C9E94_RS13920;product=YfcZ/YiiS family protein;protein_id=WP_000030904.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	107026	108333	.	+	.	ID=gene-C9E94_RS13925;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=C9E94_RS13925;old_locus_tag=C9E94_14250
NZ_PYJR01000097.1	Protein Homology	CDS	107026	108333	.	+	0	ID=cds-WP_001518618.1;Parent=gene-C9E94_RS13925;Dbxref=GenBank:WP_001518618.1;Name=WP_001518618.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=C9E94_RS13925;product=long-chain fatty acid transporter FadL;protein_id=WP_001518618.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	108394	109149	.	-	.	ID=gene-C9E94_RS13930;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=C9E94_RS13930;old_locus_tag=C9E94_14255
NZ_PYJR01000097.1	Protein Homology	CDS	108394	109149	.	-	0	ID=cds-WP_000776787.1;Parent=gene-C9E94_RS13930;Dbxref=GenBank:WP_000776787.1;Name=WP_000776787.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461334.1;locus_tag=C9E94_RS13930;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_000776787.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	109438	110379	.	+	.	ID=gene-C9E94_RS13935;Name=C9E94_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13935;old_locus_tag=C9E94_14260
NZ_PYJR01000097.1	Protein Homology	CDS	109438	110379	.	+	0	ID=cds-WP_000377769.1;Parent=gene-C9E94_RS13935;Dbxref=GenBank:WP_000377769.1;Name=WP_000377769.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461335.1;locus_tag=C9E94_RS13935;product=formate/nitrite transporter family protein;protein_id=WP_000377769.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	110455	110529	.	+	.	ID=gene-C9E94_RS13940;Name=C9E94_RS13940;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS13940;old_locus_tag=C9E94_14265
NZ_PYJR01000097.1	tRNAscan-SE	tRNA	110455	110529	.	+	.	ID=rna-C9E94_RS13940;Parent=gene-C9E94_RS13940;anticodon=(pos:110488..110490);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS13940;product=tRNA-Arg
NZ_PYJR01000097.1	tRNAscan-SE	exon	110455	110529	.	+	.	ID=exon-C9E94_RS13940-1;Parent=rna-C9E94_RS13940;anticodon=(pos:110488..110490);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS13940;product=tRNA-Arg
NZ_PYJR01000097.1	RefSeq	gene	110686	111624	.	-	.	ID=gene-C9E94_RS13945;Name=pgtE;gbkey=Gene;gene=pgtE;gene_biotype=protein_coding;locus_tag=C9E94_RS13945;old_locus_tag=C9E94_14270
NZ_PYJR01000097.1	Protein Homology	CDS	110686	111624	.	-	0	ID=cds-WP_000716009.1;Parent=gene-C9E94_RS13945;Dbxref=GenBank:WP_000716009.1;Name=WP_000716009.1;gbkey=CDS;gene=pgtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461336.1;locus_tag=C9E94_RS13945;product=omptin family outer membrane protease PgtE;protein_id=WP_000716009.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	111892	113139	.	-	.	ID=gene-C9E94_RS13950;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=protein_coding;locus_tag=C9E94_RS13950;old_locus_tag=C9E94_14275
NZ_PYJR01000097.1	Protein Homology	CDS	111892	113139	.	-	0	ID=cds-WP_000930842.1;Parent=gene-C9E94_RS13950;Dbxref=GenBank:WP_000930842.1;Name=WP_000930842.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;gene=pgtA;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461337.1;locus_tag=C9E94_RS13950;product=two-component system response regulator PgtA;protein_id=WP_000930842.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	113129	115135	.	-	.	ID=gene-C9E94_RS13955;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=C9E94_RS13955;old_locus_tag=C9E94_14280
NZ_PYJR01000097.1	Protein Homology	CDS	113129	115135	.	-	0	ID=cds-WP_023993448.1;Parent=gene-C9E94_RS13955;Dbxref=GenBank:WP_023993448.1;Name=WP_023993448.1;Ontology_term=GO:0000160,GO:0000155,GO:0005524;gbkey=CDS;gene=pgtB;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461338.1;locus_tag=C9E94_RS13955;product=two-component system sensor histidine kinase PgtB;protein_id=WP_023993448.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	115132	116325	.	-	.	ID=gene-C9E94_RS13960;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=C9E94_RS13960;old_locus_tag=C9E94_14285
NZ_PYJR01000097.1	Protein Homology	CDS	115132	116325	.	-	0	ID=cds-WP_000467983.1;Parent=gene-C9E94_RS13960;Dbxref=GenBank:WP_000467983.1;Name=WP_000467983.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461339.1;locus_tag=C9E94_RS13960;product=phosphoglycerate transport regulator PgtC;protein_id=WP_000467983.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	116761	118152	.	+	.	ID=gene-C9E94_RS13970;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=protein_coding;locus_tag=C9E94_RS13970;old_locus_tag=C9E94_14295
NZ_PYJR01000097.1	Protein Homology	CDS	116761	118152	.	+	0	ID=cds-WP_000955735.1;Parent=gene-C9E94_RS13970;Dbxref=GenBank:WP_000955735.1;Name=WP_000955735.1;Ontology_term=GO:0015760,GO:0035435,GO:0061513;gbkey=CDS;gene=pgtP;go_function=glucose 6-phosphate:phosphate antiporter activity|0061513||IEA;go_process=glucose-6-phosphate transport|0015760||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461340.1;locus_tag=C9E94_RS13970;product=phosphoglycerate transporter PgtP;protein_id=WP_000955735.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	118427	118669	.	-	.	ID=gene-C9E94_RS13975;Name=C9E94_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13975;old_locus_tag=C9E94_14300
NZ_PYJR01000097.1	Protein Homology	CDS	118427	118669	.	-	0	ID=cds-WP_000639889.1;Parent=gene-C9E94_RS13975;Dbxref=GenBank:WP_000639889.1;Name=WP_000639889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461341.1;locus_tag=C9E94_RS13975;product=YfdY family protein;protein_id=WP_000639889.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	119191	120111	.	+	.	ID=gene-C9E94_RS13980;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=C9E94_RS13980;old_locus_tag=C9E94_14305
NZ_PYJR01000097.1	Protein Homology	CDS	119191	120111	.	+	0	ID=cds-WP_000484431.1;Parent=gene-C9E94_RS13980;Dbxref=GenBank:WP_000484431.1;Name=WP_000484431.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461342.1;locus_tag=C9E94_RS13980;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_000484431.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	120514	120585	.	+	.	ID=gene-C9E94_RS13985;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=C9E94_RS13985;old_locus_tag=C9E94_14310
NZ_PYJR01000097.1	Protein Homology	CDS	120514	120585	.	+	0	ID=cds-WP_010723117.1;Parent=gene-C9E94_RS13985;Dbxref=GenBank:WP_010723117.1;Name=WP_010723117.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ypdK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=C9E94_RS13985;product=membrane protein YpdK;protein_id=WP_010723117.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	120635	121873	.	-	.	ID=gene-C9E94_RS13990;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=C9E94_RS13990;old_locus_tag=C9E94_14315
NZ_PYJR01000097.1	Protein Homology	CDS	120635	121873	.	-	0	ID=cds-WP_000763118.1;Parent=gene-C9E94_RS13990;Dbxref=GenBank:WP_000763118.1;Name=WP_000763118.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461343.1;locus_tag=C9E94_RS13990;product=alanine transaminase;protein_id=WP_000763118.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	122595	123560	.	-	.	ID=gene-C9E94_RS13995;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=C9E94_RS13995;old_locus_tag=C9E94_14320
NZ_PYJR01000097.1	Protein Homology	CDS	122595	123560	.	-	0	ID=cds-WP_000170376.1;Parent=gene-C9E94_RS13995;Dbxref=GenBank:WP_000170376.1;Name=WP_000170376.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461344.1;locus_tag=C9E94_RS13995;product=glucokinase;protein_id=WP_000170376.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	123764	124999	.	+	.	ID=gene-C9E94_RS14000;Name=C9E94_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14000;old_locus_tag=C9E94_14325
NZ_PYJR01000097.1	Protein Homology	CDS	123764	124999	.	+	0	ID=cds-WP_000468920.1;Parent=gene-C9E94_RS14000;Dbxref=GenBank:WP_000468920.1;Name=WP_000468920.1;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461345.1;locus_tag=C9E94_RS14000;product=ion channel protein;protein_id=WP_000468920.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	125019	126671	.	-	.	ID=gene-C9E94_RS14005;Name=C9E94_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14005;old_locus_tag=C9E94_14330
NZ_PYJR01000097.1	Protein Homology	CDS	125019	126671	.	-	0	ID=cds-WP_135401090.1;Parent=gene-C9E94_RS14005;Dbxref=GenBank:WP_135401090.1;Name=WP_135401090.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461346.1;locus_tag=C9E94_RS14005;product=alpha-keto acid decarboxylase family protein;protein_id=WP_135401090.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	126851	127849	.	+	.	ID=gene-C9E94_RS14015;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=C9E94_RS14015;old_locus_tag=C9E94_14340
NZ_PYJR01000097.1	Protein Homology	CDS	126851	127849	.	+	0	ID=cds-WP_135401091.1;Parent=gene-C9E94_RS14015;Dbxref=GenBank:WP_135401091.1;Name=WP_135401091.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461347.1;locus_tag=C9E94_RS14015;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_135401091.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	127963	128289	.	+	.	ID=gene-C9E94_RS14020;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=C9E94_RS14020;old_locus_tag=C9E94_14345
NZ_PYJR01000097.1	Protein Homology	CDS	127963	128289	.	+	0	ID=cds-WP_000490091.1;Parent=gene-C9E94_RS14020;Dbxref=GenBank:WP_000490091.1;Name=WP_000490091.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461348.1;locus_tag=C9E94_RS14020;product=DUF2502 domain-containing protein YpeC;protein_id=WP_000490091.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	128350	129591	.	-	.	ID=gene-C9E94_RS14025;Name=C9E94_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14025;old_locus_tag=C9E94_14350
NZ_PYJR01000097.1	Protein Homology	CDS	128350	129591	.	-	0	ID=cds-WP_000131734.1;Parent=gene-C9E94_RS14025;Dbxref=GenBank:WP_000131734.1;Name=WP_000131734.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461349.1;locus_tag=C9E94_RS14025;product=Nramp family divalent metal transporter;protein_id=WP_000131734.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	129584	129661	.	-	.	ID=gene-C9E94_RS23905;Name=C9E94_RS23905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23905
NZ_PYJR01000097.1	Protein Homology	CDS	129584	129661	.	-	0	ID=cds-WP_418144572.1;Parent=gene-C9E94_RS23905;Dbxref=GenBank:WP_418144572.1;Name=WP_418144572.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049535.1;locus_tag=C9E94_RS23905;product=hypothetical protein;protein_id=WP_418144572.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	129934	131136	.	+	.	ID=gene-C9E94_RS14030;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=C9E94_RS14030;old_locus_tag=C9E94_14355
NZ_PYJR01000097.1	Protein Homology	CDS	129934	131136	.	+	0	ID=cds-WP_000376347.1;Parent=gene-C9E94_RS14030;Dbxref=GenBank:WP_000376347.1;Name=WP_000376347.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461350.1;locus_tag=C9E94_RS14030;product=nucleoside permease NupC;protein_id=WP_000376347.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	131189	133378	.	-	.	ID=gene-C9E94_RS14035;Name=C9E94_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS14035;old_locus_tag=C9E94_14360
NZ_PYJR01000097.1	Protein Homology	CDS	131189	133378	.	-	0	ID=cds-WP_135401092.1;Parent=gene-C9E94_RS14035;Dbxref=GenBank:WP_135401092.1;Name=WP_135401092.1;Ontology_term=GO:0000160,GO:0007165,GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461351.1;locus_tag=C9E94_RS14035;product=EAL domain-containing protein;protein_id=WP_135401092.1;transl_table=11
NZ_PYJR01000097.1	RefSeq	gene	133569	133644	.	-	.	ID=gene-C9E94_RS14040;Name=C9E94_RS14040;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS14040;old_locus_tag=C9E94_14365
NZ_PYJR01000097.1	tRNAscan-SE	tRNA	133569	133644	.	-	.	ID=rna-C9E94_RS14040;Parent=gene-C9E94_RS14040;anticodon=(pos:complement(133609..133611));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS14040;product=tRNA-Ala
NZ_PYJR01000097.1	tRNAscan-SE	exon	133569	133644	.	-	.	ID=exon-C9E94_RS14040-1;Parent=rna-C9E94_RS14040;anticodon=(pos:complement(133609..133611));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS14040;product=tRNA-Ala
NZ_PYJR01000097.1	RefSeq	gene	133687	133762	.	-	.	ID=gene-C9E94_RS14045;Name=C9E94_RS14045;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS14045;old_locus_tag=C9E94_14370
NZ_PYJR01000097.1	tRNAscan-SE	tRNA	133687	133762	.	-	.	ID=rna-C9E94_RS14045;Parent=gene-C9E94_RS14045;anticodon=(pos:complement(133727..133729));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS14045;product=tRNA-Ala
NZ_PYJR01000097.1	tRNAscan-SE	exon	133687	133762	.	-	.	ID=exon-C9E94_RS14045-1;Parent=rna-C9E94_RS14045;anticodon=(pos:complement(133727..133729));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS14045;product=tRNA-Ala
##sequence-region NZ_PYJR01000076.1 1 30910
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000076.1	RefSeq	region	1	30910	.	+	.	ID=NZ_PYJR01000076.1:1..30910;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000076.1	RefSeq	gene	180	884	.	+	.	ID=gene-C9E94_RS09715;Name=C9E94_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09715;old_locus_tag=C9E94_09930
NZ_PYJR01000076.1	Protein Homology	CDS	180	884	.	+	0	ID=cds-WP_001131148.1;Parent=gene-C9E94_RS09715;Dbxref=GenBank:WP_001131148.1;Name=WP_001131148.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462787.1;locus_tag=C9E94_RS09715;product=FadR/GntR family transcriptional regulator;protein_id=WP_001131148.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	896	2323	.	+	.	ID=gene-C9E94_RS09720;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=C9E94_RS09720;old_locus_tag=C9E94_09935
NZ_PYJR01000076.1	Protein Homology	CDS	896	2323	.	+	0	ID=cds-WP_000202067.1;Parent=gene-C9E94_RS09720;Dbxref=GenBank:WP_000202067.1;Name=WP_000202067.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462786.1;locus_tag=C9E94_RS09720;product=multidrug transporter subunit MdtD;protein_id=WP_000202067.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	2289	3287	.	-	.	ID=gene-C9E94_RS09725;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=C9E94_RS09725;old_locus_tag=C9E94_09940
NZ_PYJR01000076.1	Protein Homology	CDS	2289	3287	.	-	0	ID=cds-WP_135400967.1;Parent=gene-C9E94_RS09725;Dbxref=GenBank:WP_135400967.1;Name=WP_135400967.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462785.1;locus_tag=C9E94_RS09725;product=ribose operon transcriptional repressor RbsR;protein_id=WP_135400967.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	3291	4220	.	-	.	ID=gene-C9E94_RS09730;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=C9E94_RS09730;old_locus_tag=C9E94_09945
NZ_PYJR01000076.1	Protein Homology	CDS	3291	4220	.	-	0	ID=cds-WP_000844728.1;Parent=gene-C9E94_RS09730;Dbxref=GenBank:WP_000844728.1;Name=WP_000844728.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462784.1;locus_tag=C9E94_RS09730;product=ribokinase;protein_id=WP_000844728.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	4353	5243	.	-	.	ID=gene-C9E94_RS09735;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=C9E94_RS09735;old_locus_tag=C9E94_09950
NZ_PYJR01000076.1	Protein Homology	CDS	4353	5243	.	-	0	ID=cds-WP_001056260.1;Parent=gene-C9E94_RS09735;Dbxref=GenBank:WP_001056260.1;Name=WP_001056260.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462783.1;locus_tag=C9E94_RS09735;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_001056260.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	5268	6233	.	-	.	ID=gene-C9E94_RS09740;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=C9E94_RS09740;old_locus_tag=C9E94_09955
NZ_PYJR01000076.1	Protein Homology	CDS	5268	6233	.	-	0	ID=cds-WP_000211345.1;Parent=gene-C9E94_RS09740;Dbxref=GenBank:WP_000211345.1;Name=WP_000211345.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=C9E94_RS09740;product=ribose ABC transporter permease;protein_id=WP_000211345.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	6239	7744	.	-	.	ID=gene-C9E94_RS09745;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=C9E94_RS09745;old_locus_tag=C9E94_09960
NZ_PYJR01000076.1	Protein Homology	CDS	6239	7744	.	-	0	ID=cds-WP_000339359.1;Parent=gene-C9E94_RS09745;Dbxref=GenBank:WP_000339359.1;Name=WP_000339359.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462781.1;locus_tag=C9E94_RS09745;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_000339359.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	7752	8171	.	-	.	ID=gene-C9E94_RS09750;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=C9E94_RS09750;old_locus_tag=C9E94_09965
NZ_PYJR01000076.1	Protein Homology	CDS	7752	8171	.	-	0	ID=cds-WP_000715944.1;Parent=gene-C9E94_RS09750;Dbxref=GenBank:WP_000715944.1;Name=WP_000715944.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462780.1;locus_tag=C9E94_RS09750;product=D-ribose pyranase;protein_id=WP_000715944.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	8388	10256	.	-	.	ID=gene-C9E94_RS09755;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=C9E94_RS09755;old_locus_tag=C9E94_09970
NZ_PYJR01000076.1	Protein Homology	CDS	8388	10256	.	-	0	ID=cds-WP_000102338.1;Parent=gene-C9E94_RS09755;Dbxref=GenBank:WP_000102338.1;Name=WP_000102338.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=C9E94_RS09755;product=low affinity potassium transporter Kup;protein_id=WP_000102338.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	10604	12100	.	+	.	ID=gene-C9E94_RS09760;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=C9E94_RS09760;old_locus_tag=C9E94_09975
NZ_PYJR01000076.1	Protein Homology	CDS	10604	12100	.	+	0	ID=cds-WP_000940987.1;Parent=gene-C9E94_RS09760;Dbxref=GenBank:WP_000940987.1;Name=WP_000940987.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462778.1;locus_tag=C9E94_RS09760;product=ATPase RavA;protein_id=WP_000940987.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	12094	13545	.	+	.	ID=gene-C9E94_RS09765;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=C9E94_RS09765;old_locus_tag=C9E94_09980
NZ_PYJR01000076.1	Protein Homology	CDS	12094	13545	.	+	0	ID=cds-WP_000956582.1;Parent=gene-C9E94_RS09765;Dbxref=GenBank:WP_000956582.1;Name=WP_000956582.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=C9E94_RS09765;product=ATPase RavA stimulator ViaA;protein_id=WP_000956582.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	13550	14542	.	-	.	ID=gene-C9E94_RS09770;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=C9E94_RS09770;old_locus_tag=C9E94_09985
NZ_PYJR01000076.1	Protein Homology	CDS	13550	14542	.	-	0	ID=cds-WP_061378621.1;Parent=gene-C9E94_RS09770;Dbxref=GenBank:WP_061378621.1;Name=WP_061378621.1;Ontology_term=GO:0006529,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462776.1;locus_tag=C9E94_RS09770;product=aspartate--ammonia ligase;protein_id=WP_061378621.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	14693	15151	.	+	.	ID=gene-C9E94_RS09775;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=C9E94_RS09775;old_locus_tag=C9E94_09990
NZ_PYJR01000076.1	Protein Homology	CDS	14693	15151	.	+	0	ID=cds-WP_000433018.1;Parent=gene-C9E94_RS09775;Dbxref=GenBank:WP_000433018.1;Name=WP_000433018.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462775.1;locus_tag=C9E94_RS09775;product=transcriptional regulator AsnC;protein_id=WP_000433018.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	15241	15684	.	+	.	ID=gene-C9E94_RS09780;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=C9E94_RS09780;old_locus_tag=C9E94_09995
NZ_PYJR01000076.1	Protein Homology	CDS	15241	15684	.	+	0	ID=cds-WP_001531212.1;Parent=gene-C9E94_RS09780;Dbxref=GenBank:WP_001531212.1;Name=WP_001531212.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462774.1;locus_tag=C9E94_RS09780;product=FMN-binding protein MioC;protein_id=WP_001531212.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	16063	17952	.	+	.	ID=gene-C9E94_RS09790;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=C9E94_RS09790;old_locus_tag=C9E94_10005
NZ_PYJR01000076.1	Protein Homology	CDS	16063	17952	.	+	0	ID=cds-WP_000499872.1;Parent=gene-C9E94_RS09790;Dbxref=GenBank:WP_000499872.1;Name=WP_000499872.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=C9E94_RS09790;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_000499872.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	18055	18678	.	+	.	ID=gene-C9E94_RS09795;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=C9E94_RS09795;old_locus_tag=C9E94_10010
NZ_PYJR01000076.1	Protein Homology	CDS	18055	18678	.	+	0	ID=cds-WP_001519938.1;Parent=gene-C9E94_RS09795;Dbxref=GenBank:WP_001519938.1;Name=WP_001519938.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462772.3;locus_tag=C9E94_RS09795;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_001519938.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	19294	19674	.	+	.	ID=gene-C9E94_RS09800;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=C9E94_RS09800;old_locus_tag=C9E94_10015
NZ_PYJR01000076.1	Protein Homology	CDS	19294	19674	.	+	0	ID=cds-WP_000116685.1;Parent=gene-C9E94_RS09800;Dbxref=GenBank:WP_000116685.1;Name=WP_000116685.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462771.1;locus_tag=C9E94_RS09800;product=F0F1 ATP synthase subunit I;protein_id=WP_000116685.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	19683	20498	.	+	.	ID=gene-C9E94_RS09805;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=C9E94_RS09805;old_locus_tag=C9E94_10020
NZ_PYJR01000076.1	Protein Homology	CDS	19683	20498	.	+	0	ID=cds-WP_000135632.1;Parent=gene-C9E94_RS09805;Dbxref=GenBank:WP_000135632.1;Name=WP_000135632.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=C9E94_RS09805;product=F0F1 ATP synthase subunit A;protein_id=WP_000135632.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	20545	20784	.	+	.	ID=gene-C9E94_RS09810;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=C9E94_RS09810;old_locus_tag=C9E94_10025
NZ_PYJR01000076.1	Protein Homology	CDS	20545	20784	.	+	0	ID=cds-WP_000429386.1;Parent=gene-C9E94_RS09810;Dbxref=GenBank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=C9E94_RS09810;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	20844	21314	.	+	.	ID=gene-C9E94_RS09815;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=C9E94_RS09815;old_locus_tag=C9E94_10030
NZ_PYJR01000076.1	Protein Homology	CDS	20844	21314	.	+	0	ID=cds-WP_001052212.1;Parent=gene-C9E94_RS09815;Dbxref=GenBank:WP_001052212.1;Name=WP_001052212.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=C9E94_RS09815;product=F0F1 ATP synthase subunit B;protein_id=WP_001052212.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	21329	21862	.	+	.	ID=gene-C9E94_RS09820;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=C9E94_RS09820;old_locus_tag=C9E94_10035
NZ_PYJR01000076.1	Protein Homology	CDS	21329	21862	.	+	0	ID=cds-WP_001288957.1;Parent=gene-C9E94_RS09820;Dbxref=GenBank:WP_001288957.1;Name=WP_001288957.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=C9E94_RS09820;product=F0F1 ATP synthase subunit delta;protein_id=WP_001288957.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	21875	23416	.	+	.	ID=gene-C9E94_RS09825;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=C9E94_RS09825;old_locus_tag=C9E94_10040
NZ_PYJR01000076.1	Protein Homology	CDS	21875	23416	.	+	0	ID=cds-WP_001176751.1;Parent=gene-C9E94_RS09825;Dbxref=GenBank:WP_001176751.1;Name=WP_001176751.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=C9E94_RS09825;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001176751.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	23467	24330	.	+	.	ID=gene-C9E94_RS09830;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=C9E94_RS09830;old_locus_tag=C9E94_10045
NZ_PYJR01000076.1	Protein Homology	CDS	23467	24330	.	+	0	ID=cds-WP_000896507.1;Parent=gene-C9E94_RS09830;Dbxref=GenBank:WP_000896507.1;Name=WP_000896507.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=C9E94_RS09830;product=F0F1 ATP synthase subunit gamma;protein_id=WP_000896507.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	24357	25739	.	+	.	ID=gene-C9E94_RS09835;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=C9E94_RS09835;old_locus_tag=C9E94_10050
NZ_PYJR01000076.1	Protein Homology	CDS	24357	25739	.	+	0	ID=cds-WP_000190499.1;Parent=gene-C9E94_RS09835;Dbxref=GenBank:WP_000190499.1;Name=WP_000190499.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=C9E94_RS09835;product=F0F1 ATP synthase subunit beta;protein_id=WP_000190499.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	25760	26179	.	+	.	ID=gene-C9E94_RS09840;Name=C9E94_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09840;old_locus_tag=C9E94_10055
NZ_PYJR01000076.1	Protein Homology	CDS	25760	26179	.	+	0	ID=cds-WP_001251971.1;Parent=gene-C9E94_RS09840;Dbxref=GenBank:WP_001251971.1;Name=WP_001251971.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=C9E94_RS09840;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251971.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	26409	27107	.	+	.	ID=gene-C9E94_RS09845;Name=C9E94_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09845;old_locus_tag=C9E94_10060
NZ_PYJR01000076.1	Protein Homology	CDS	26409	27107	.	+	0	ID=cds-WP_000009908.1;Parent=gene-C9E94_RS09845;Dbxref=GenBank:WP_000009908.1;Name=WP_000009908.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462762.1;locus_tag=C9E94_RS09845;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000009908.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	27427	28797	.	+	.	ID=gene-C9E94_RS09855;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=C9E94_RS09855;old_locus_tag=C9E94_10070
NZ_PYJR01000076.1	Protein Homology	CDS	27427	28797	.	+	0	ID=cds-WP_000934851.1;Parent=gene-C9E94_RS09855;Dbxref=GenBank:WP_000934851.1;Name=WP_000934851.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462761.1;locus_tag=C9E94_RS09855;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_000934851.1;transl_table=11
NZ_PYJR01000076.1	RefSeq	gene	28986	30815	.	+	.	ID=gene-C9E94_RS09860;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=C9E94_RS09860;old_locus_tag=C9E94_10075
NZ_PYJR01000076.1	Protein Homology	CDS	28986	30815	.	+	0	ID=cds-WP_000334057.1;Parent=gene-C9E94_RS09860;Dbxref=GenBank:WP_000334057.1;Name=WP_000334057.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=C9E94_RS09860;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_000334057.1;transl_table=11
##sequence-region NZ_PYJR01000120.1 1 29625
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000120.1	RefSeq	region	1	29625	.	+	.	ID=NZ_PYJR01000120.1:1..29625;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000120.1	RefSeq	gene	26	1399	.	-	.	ID=gene-C9E94_RS17955;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=C9E94_RS17955;old_locus_tag=C9E94_18390
NZ_PYJR01000120.1	Protein Homology	CDS	26	1399	.	-	0	ID=cds-WP_135401155.1;Parent=gene-C9E94_RS17955;Dbxref=GenBank:WP_135401155.1;Name=WP_135401155.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462380.1;locus_tag=C9E94_RS17955;product=siroheme synthase CysG;protein_id=WP_135401155.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	1411	2220	.	-	.	ID=gene-C9E94_RS17960;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=C9E94_RS17960;old_locus_tag=C9E94_18395
NZ_PYJR01000120.1	Protein Homology	CDS	1411	2220	.	-	0	ID=cds-WP_135401156.1;Parent=gene-C9E94_RS17960;Dbxref=GenBank:WP_135401156.1;Name=WP_135401156.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462379.1;locus_tag=C9E94_RS17960;product=nitrite transporter NirC;protein_id=WP_135401156.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	2486	2812	.	-	.	ID=gene-C9E94_RS17965;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=C9E94_RS17965;old_locus_tag=C9E94_18400
NZ_PYJR01000120.1	Protein Homology	CDS	2486	2812	.	-	0	ID=cds-WP_000084814.1;Parent=gene-C9E94_RS17965;Dbxref=GenBank:WP_000084814.1;Name=WP_000084814.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462378.1;locus_tag=C9E94_RS17965;product=nitrite reductase small subunit NirD;protein_id=WP_000084814.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	2809	5352	.	-	.	ID=gene-C9E94_RS17970;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=C9E94_RS17970;old_locus_tag=C9E94_18405
NZ_PYJR01000120.1	Protein Homology	CDS	2809	5352	.	-	0	ID=cds-WP_135401157.1;Parent=gene-C9E94_RS17970;Dbxref=GenBank:WP_135401157.1;Name=WP_135401157.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=C9E94_RS17970;product=NADPH-nitrite reductase large subunit;protein_id=WP_135401157.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	5670	6851	.	-	.	ID=gene-C9E94_RS17975;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=C9E94_RS17975;old_locus_tag=C9E94_18410
NZ_PYJR01000120.1	Protein Homology	CDS	5670	6851	.	-	0	ID=cds-WP_000185267.1;Parent=gene-C9E94_RS17975;Dbxref=GenBank:WP_000185267.1;Name=WP_000185267.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462376.1;locus_tag=C9E94_RS17975;product=MFS transporter TsgA;protein_id=WP_000185267.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	7128	7700	.	+	.	ID=gene-C9E94_RS17980;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=C9E94_RS17980;old_locus_tag=C9E94_18415
NZ_PYJR01000120.1	Protein Homology	CDS	7128	7700	.	+	0	ID=cds-WP_000920478.1;Parent=gene-C9E94_RS17980;Dbxref=GenBank:WP_000920478.1;Name=WP_000920478.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462375.1;locus_tag=C9E94_RS17980;product=peptidylprolyl isomerase A;protein_id=WP_000920478.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	7809	7976	.	+	.	ID=gene-C9E94_RS17985;Name=C9E94_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17985;old_locus_tag=C9E94_18420
NZ_PYJR01000120.1	Protein Homology	CDS	7809	7976	.	+	0	ID=cds-WP_001519136.1;Parent=gene-C9E94_RS17985;Dbxref=GenBank:WP_001519136.1;Name=WP_001519136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462374.1;locus_tag=C9E94_RS17985;product=YhfG family protein;protein_id=WP_001519136.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	7966	8568	.	+	.	ID=gene-C9E94_RS17990;Name=C9E94_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17990;old_locus_tag=C9E94_18425
NZ_PYJR01000120.1	Protein Homology	CDS	7966	8568	.	+	0	ID=cds-WP_001280665.1;Parent=gene-C9E94_RS17990;Dbxref=GenBank:WP_001280665.1;Name=WP_001280665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462373.1;locus_tag=C9E94_RS17990;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_001280665.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	8600	9163	.	+	.	ID=gene-C9E94_RS17995;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=C9E94_RS17995;old_locus_tag=C9E94_18430
NZ_PYJR01000120.1	Protein Homology	CDS	8600	9163	.	+	0	ID=cds-WP_000601879.1;Parent=gene-C9E94_RS17995;Dbxref=GenBank:WP_000601879.1;Name=WP_000601879.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462372.1;locus_tag=C9E94_RS17995;product=aminodeoxychorismate synthase component 2;protein_id=WP_000601879.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	9249	10466	.	+	.	ID=gene-C9E94_RS18000;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=C9E94_RS18000;old_locus_tag=C9E94_18435
NZ_PYJR01000120.1	Protein Homology	CDS	9249	10466	.	+	0	ID=cds-WP_001631070.1;Parent=gene-C9E94_RS18000;Dbxref=GenBank:WP_001631070.1;Name=WP_001631070.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462371.1;locus_tag=C9E94_RS18000;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_001631070.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	10509	12596	.	-	.	ID=gene-C9E94_RS18005;Name=C9E94_RS18005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18005;old_locus_tag=C9E94_18440
NZ_PYJR01000120.1	Protein Homology	CDS	10509	12596	.	-	0	ID=cds-WP_000269312.1;Parent=gene-C9E94_RS18005;Dbxref=GenBank:WP_000269312.1;Name=WP_000269312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312236.3;locus_tag=C9E94_RS18005;product=YccS/YhfK family putative transporter;protein_id=WP_000269312.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	12645	13277	.	-	.	ID=gene-C9E94_RS18010;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=C9E94_RS18010;old_locus_tag=C9E94_18445
NZ_PYJR01000120.1	Protein Homology	CDS	12645	13277	.	-	0	ID=cds-WP_000242758.1;Parent=gene-C9E94_RS18010;Dbxref=GenBank:WP_000242758.1;Name=WP_000242758.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=C9E94_RS18010;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242758.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	13585	13989	.	+	.	ID=gene-C9E94_RS18015;Name=C9E94_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18015;old_locus_tag=C9E94_18450
NZ_PYJR01000120.1	Protein Homology	CDS	13585	13989	.	+	0	ID=cds-WP_001148919.1;Parent=gene-C9E94_RS18015;Dbxref=GenBank:WP_001148919.1;Name=WP_001148919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462368.1;locus_tag=C9E94_RS18015;product=OsmC family protein;protein_id=WP_001148919.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	14085	14954	.	-	.	ID=gene-C9E94_RS18020;Name=C9E94_RS18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18020;old_locus_tag=C9E94_18455
NZ_PYJR01000120.1	Protein Homology	CDS	14085	14954	.	-	0	ID=cds-WP_001274690.1;Parent=gene-C9E94_RS18020;Dbxref=GenBank:WP_001274690.1;Name=WP_001274690.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462367.1;locus_tag=C9E94_RS18020;product=phosphoribulokinase;protein_id=WP_001274690.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	15006	15224	.	-	.	ID=gene-C9E94_RS18025;Name=C9E94_RS18025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18025;old_locus_tag=C9E94_18460
NZ_PYJR01000120.1	Protein Homology	CDS	15006	15224	.	-	0	ID=cds-WP_000586568.1;Parent=gene-C9E94_RS18025;Dbxref=GenBank:WP_000586568.1;Name=WP_000586568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=C9E94_RS18025;product=YheU family protein;protein_id=WP_000586568.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	15221	16288	.	-	.	ID=gene-C9E94_RS18030;Name=C9E94_RS18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18030;old_locus_tag=C9E94_18465
NZ_PYJR01000120.1	Protein Homology	CDS	15221	16288	.	-	0	ID=cds-WP_001214115.1;Parent=gene-C9E94_RS18030;Dbxref=GenBank:WP_001214115.1;Name=WP_001214115.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462365.1;locus_tag=C9E94_RS18030;product=hydrolase;protein_id=WP_001214115.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	16486	16797	.	+	.	ID=gene-C9E94_RS18035;Name=C9E94_RS18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18035;old_locus_tag=C9E94_18470
NZ_PYJR01000120.1	Protein Homology	CDS	16486	16797	.	+	0	ID=cds-WP_000047690.1;Parent=gene-C9E94_RS18035;Dbxref=GenBank:WP_000047690.1;Name=WP_000047690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462364.1;locus_tag=C9E94_RS18035;product=monooxygenase;protein_id=WP_000047690.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	16799	17020	.	-	.	ID=gene-C9E94_RS18040;Name=C9E94_RS18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18040;old_locus_tag=C9E94_18475
NZ_PYJR01000120.1	Protein Homology	CDS	16799	17020	.	-	0	ID=cds-WP_023214255.1;Parent=gene-C9E94_RS18040;Dbxref=GenBank:WP_023214255.1;Name=WP_023214255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054026.1;locus_tag=C9E94_RS18040;product=LysR family transcriptional regulator;protein_id=WP_023214255.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	17183	19090	.	-	.	ID=gene-C9E94_RS18045;Name=C9E94_RS18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18045;old_locus_tag=C9E94_18480
NZ_PYJR01000120.1	Protein Homology	CDS	17183	19090	.	-	0	ID=cds-WP_135401158.1;Parent=gene-C9E94_RS18045;Dbxref=GenBank:WP_135401158.1;Name=WP_135401158.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462363.1;locus_tag=C9E94_RS18045;product=ABC transporter ATP-binding protein;protein_id=WP_135401158.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	19356	19907	.	+	.	ID=gene-C9E94_RS18050;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=C9E94_RS18050;old_locus_tag=C9E94_18485
NZ_PYJR01000120.1	Protein Homology	CDS	19356	19907	.	+	0	ID=cds-WP_135401159.1;Parent=gene-C9E94_RS18050;Dbxref=GenBank:WP_135401159.1;Name=WP_135401159.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462362.1;locus_tag=C9E94_RS18050;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_135401159.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	19907	21712	.	+	.	ID=gene-C9E94_RS18055;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=C9E94_RS18055;old_locus_tag=C9E94_18490
NZ_PYJR01000120.1	Protein Homology	CDS	19907	21712	.	+	0	ID=cds-WP_135401160.1;Parent=gene-C9E94_RS18055;Dbxref=GenBank:WP_135401160.1;Name=WP_135401160.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462361.1;locus_tag=C9E94_RS18055;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_135401160.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	21722	21922	.	+	.	ID=gene-C9E94_RS18060;Name=C9E94_RS18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18060;old_locus_tag=C9E94_18495
NZ_PYJR01000120.1	Protein Homology	CDS	21722	21922	.	+	0	ID=cds-WP_001007735.1;Parent=gene-C9E94_RS18060;Dbxref=GenBank:WP_001007735.1;Name=WP_001007735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462360.1;locus_tag=C9E94_RS18060;product=YheV family putative zinc ribbon protein;protein_id=WP_001007735.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	22017	22607	.	+	.	ID=gene-C9E94_RS18065;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=C9E94_RS18065;old_locus_tag=C9E94_18500
NZ_PYJR01000120.1	Protein Homology	CDS	22017	22607	.	+	0	ID=cds-WP_000861341.1;Parent=gene-C9E94_RS18065;Dbxref=GenBank:WP_000861341.1;Name=WP_000861341.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462359.1;locus_tag=C9E94_RS18065;product=peptidylprolyl isomerase;protein_id=WP_000861341.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	22795	23013	.	-	.	ID=gene-C9E94_RS18070;Name=C9E94_RS18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18070;old_locus_tag=C9E94_18505
NZ_PYJR01000120.1	Protein Homology	CDS	22795	23013	.	-	0	ID=cds-WP_001152701.1;Parent=gene-C9E94_RS18070;Dbxref=GenBank:WP_001152701.1;Name=WP_001152701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462358.1;locus_tag=C9E94_RS18070;product=protein SlyX;protein_id=WP_001152701.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	23233	24051	.	+	.	ID=gene-C9E94_RS18075;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=C9E94_RS18075;old_locus_tag=C9E94_18510
NZ_PYJR01000120.1	Protein Homology	CDS	23233	24051	.	+	0	ID=cds-WP_135401161.1;Parent=gene-C9E94_RS18075;Dbxref=GenBank:WP_135401161.1;Name=WP_135401161.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462357.1;locus_tag=C9E94_RS18075;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_135401161.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	24328	25050	.	+	.	ID=gene-C9E94_RS18080;Name=C9E94_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18080;old_locus_tag=C9E94_18515
NZ_PYJR01000120.1	Protein Homology	CDS	24328	25050	.	+	0	ID=cds-WP_000091471.1;Parent=gene-C9E94_RS18080;Dbxref=GenBank:WP_000091471.1;Name=WP_000091471.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462356.1;locus_tag=C9E94_RS18080;product=helix-turn-helix transcriptional regulator;protein_id=WP_000091471.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	25050	25436	.	+	.	ID=gene-C9E94_RS18085;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=C9E94_RS18085;old_locus_tag=C9E94_18520
NZ_PYJR01000120.1	Protein Homology	CDS	25050	25436	.	+	0	ID=cds-WP_001268012.1;Parent=gene-C9E94_RS18085;Dbxref=GenBank:WP_001268012.1;Name=WP_001268012.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462355.1;locus_tag=C9E94_RS18085;product=sulfurtransferase complex subunit TusD;protein_id=WP_001268012.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	25436	25792	.	+	.	ID=gene-C9E94_RS18090;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=C9E94_RS18090;old_locus_tag=C9E94_18525
NZ_PYJR01000120.1	Protein Homology	CDS	25436	25792	.	+	0	ID=cds-WP_023250746.1;Parent=gene-C9E94_RS18090;Dbxref=GenBank:WP_023250746.1;Name=WP_023250746.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462354.1;locus_tag=C9E94_RS18090;product=sulfurtransferase complex subunit TusC;protein_id=WP_023250746.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	25800	26087	.	+	.	ID=gene-C9E94_RS18095;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=C9E94_RS18095;old_locus_tag=C9E94_18530
NZ_PYJR01000120.1	Protein Homology	CDS	25800	26087	.	+	0	ID=cds-WP_000903398.1;Parent=gene-C9E94_RS18095;Dbxref=GenBank:WP_000903398.1;Name=WP_000903398.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462353.1;locus_tag=C9E94_RS18095;product=sulfurtransferase complex subunit TusB;protein_id=WP_000903398.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	26213	26587	.	+	.	ID=gene-C9E94_RS18100;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=C9E94_RS18100;old_locus_tag=C9E94_18535
NZ_PYJR01000120.1	Protein Homology	CDS	26213	26587	.	+	0	ID=cds-WP_000246815.1;Parent=gene-C9E94_RS18100;Dbxref=GenBank:WP_000246815.1;Name=WP_000246815.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=C9E94_RS18100;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	26683	27153	.	+	.	ID=gene-C9E94_RS18105;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=C9E94_RS18105;old_locus_tag=C9E94_18540
NZ_PYJR01000120.1	Protein Homology	CDS	26683	27153	.	+	0	ID=cds-WP_001138043.1;Parent=gene-C9E94_RS18105;Dbxref=GenBank:WP_001138043.1;Name=WP_001138043.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=C9E94_RS18105;product=30S ribosomal protein S7;protein_id=WP_001138043.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	27250	29364	.	+	.	ID=gene-C9E94_RS18110;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=C9E94_RS18110;old_locus_tag=C9E94_18545
NZ_PYJR01000120.1	Protein Homology	CDS	27250	29364	.	+	0	ID=cds-WP_000124693.1;Parent=gene-C9E94_RS18110;Dbxref=GenBank:WP_000124693.1;Name=WP_000124693.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=C9E94_RS18110;product=elongation factor G;protein_id=WP_000124693.1;transl_table=11
NZ_PYJR01000120.1	RefSeq	gene	29436	29625	.	+	.	ID=gene-C9E94_RS18115;Name=C9E94_RS18115;end_range=29625,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS18115;old_locus_tag=C9E94_18550;partial=true
NZ_PYJR01000120.1	Protein Homology	CDS	29436	29625	.	+	0	ID=cds-WP_021498352.1-2;Parent=gene-C9E94_RS18115;Dbxref=GenBank:WP_021498352.1;Name=WP_021498352.1;Ontology_term=GO:0003924,GO:0005525;end_range=29625,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=C9E94_RS18115;partial=true;product=GTP-binding protein;protein_id=WP_021498352.1;transl_table=11
##sequence-region NZ_PYJR01000019.1 1 29239
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000019.1	RefSeq	region	1	29239	.	+	.	ID=NZ_PYJR01000019.1:1..29239;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000019.1	RefSeq	gene	1	559	.	+	.	ID=gene-C9E94_RS01515;Name=C9E94_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01515;old_locus_tag=C9E94_01550;partial=true;start_range=.,1
NZ_PYJR01000019.1	Protein Homology	CDS	1	559	.	+	1	ID=cds-WP_167853635.1;Parent=gene-C9E94_RS01515;Dbxref=GenBank:WP_167853635.1;Name=WP_167853635.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147761.1;locus_tag=C9E94_RS01515;partial=true;product=fimbrial protein;protein_id=WP_167853635.1;start_range=.,1;transl_table=11
NZ_PYJR01000019.1	RefSeq	gene	669	1175	.	+	.	ID=gene-C9E94_RS01520;Name=C9E94_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01520;old_locus_tag=C9E94_01555
NZ_PYJR01000019.1	Protein Homology	CDS	669	1175	.	+	0	ID=cds-WP_000093333.1;Parent=gene-C9E94_RS01520;Dbxref=GenBank:WP_000093333.1;Name=WP_000093333.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006777639.1;locus_tag=C9E94_RS01520;product=CaiF/GrlA family transcriptional regulator;protein_id=WP_000093333.1;transl_table=11
NZ_PYJR01000019.1	RefSeq	gene	1162	1920	.	+	.	ID=gene-C9E94_RS01525;Name=C9E94_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01525;old_locus_tag=C9E94_01560
NZ_PYJR01000019.1	Protein Homology	CDS	1162	1920	.	+	0	ID=cds-WP_079981335.1;Parent=gene-C9E94_RS01525;Dbxref=GenBank:WP_079981335.1;Name=WP_079981335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461942.1;locus_tag=C9E94_RS01525;product=transcriptional regulator;protein_id=WP_079981335.1;transl_table=11
NZ_PYJR01000019.1	RefSeq	gene	2130	2984	.	-	.	ID=gene-C9E94_RS01530;Name=C9E94_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01530;old_locus_tag=C9E94_01565
NZ_PYJR01000019.1	Protein Homology	CDS	2130	2984	.	-	0	ID=cds-WP_135400751.1;Parent=gene-C9E94_RS01530;Dbxref=GenBank:WP_135400751.1;Name=WP_135400751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461941.1;locus_tag=C9E94_RS01530;product=nickel/cobalt efflux protein RcnA;protein_id=WP_135400751.1;transl_table=11
NZ_PYJR01000019.1	RefSeq	gene	3106	3378	.	+	.	ID=gene-C9E94_RS01535;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=C9E94_RS01535;old_locus_tag=C9E94_01570
NZ_PYJR01000019.1	Protein Homology	CDS	3106	3378	.	+	0	ID=cds-WP_000019953.1;Parent=gene-C9E94_RS01535;Dbxref=GenBank:WP_000019953.1;Name=WP_000019953.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461940.1;locus_tag=C9E94_RS01535;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=WP_000019953.1;transl_table=11
NZ_PYJR01000019.1	RefSeq	gene	3409	4638	.	-	.	ID=gene-C9E94_RS01540;Name=C9E94_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01540;old_locus_tag=C9E94_01575
NZ_PYJR01000019.1	Protein Homology	CDS	3409	4638	.	-	0	ID=cds-WP_000036836.1;Parent=gene-C9E94_RS01540;Dbxref=GenBank:WP_000036836.1;Name=WP_000036836.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461939.1;locus_tag=C9E94_RS01540;product=amino acid permease;protein_id=WP_000036836.1;transl_table=11
NZ_PYJR01000019.1	RefSeq	gene	4780	5235	.	-	.	ID=gene-C9E94_RS01545;Name=C9E94_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01545;old_locus_tag=C9E94_01580
NZ_PYJR01000019.1	Protein Homology	CDS	4780	5235	.	-	0	ID=cds-WP_135400752.1;Parent=gene-C9E94_RS01545;Dbxref=GenBank:WP_135400752.1;Name=WP_135400752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465480.1;locus_tag=C9E94_RS01545;product=multidrug/biocide efflux PACE transporter;protein_id=WP_135400752.1;transl_table=11
NZ_PYJR01000019.1	RefSeq	gene	5339	6202	.	+	.	ID=gene-C9E94_RS01550;Name=C9E94_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01550;old_locus_tag=C9E94_01585
NZ_PYJR01000019.1	Protein Homology	CDS	5339	6202	.	+	0	ID=cds-WP_001270769.1;Parent=gene-C9E94_RS01550;Dbxref=GenBank:WP_001270769.1;Name=WP_001270769.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461937.1;locus_tag=C9E94_RS01550;product=LysR family transcriptional regulator;protein_id=WP_001270769.1;transl_table=11
NZ_PYJR01000019.1	RefSeq	gene	6325	7503	.	+	.	ID=gene-C9E94_RS01555;Name=C9E94_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01555;old_locus_tag=C9E94_01590
NZ_PYJR01000019.1	Protein Homology	CDS	6325	7503	.	+	0	ID=cds-WP_000665980.1;Parent=gene-C9E94_RS01555;Dbxref=GenBank:WP_000665980.1;Name=WP_000665980.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461936.1;locus_tag=C9E94_RS01555;product=acetyl-CoA C-acetyltransferase;protein_id=WP_000665980.1;transl_table=11
NZ_PYJR01000019.1	RefSeq	gene	7933	8769	.	+	.	ID=gene-C9E94_RS01565;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=C9E94_RS01565;old_locus_tag=C9E94_01600
NZ_PYJR01000019.1	Protein Homology	CDS	7933	8769	.	+	0	ID=cds-WP_135400753.1;Parent=gene-C9E94_RS01565;Dbxref=GenBank:WP_135400753.1;Name=WP_135400753.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461935.1;locus_tag=C9E94_RS01565;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_135400753.1;transl_table=11
NZ_PYJR01000019.1	RefSeq	gene	8826	9587	.	+	.	ID=gene-C9E94_RS01570;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=C9E94_RS01570;old_locus_tag=C9E94_01605
NZ_PYJR01000019.1	Protein Homology	CDS	8826	9587	.	+	0	ID=cds-WP_135400754.1;Parent=gene-C9E94_RS01570;Dbxref=GenBank:WP_135400754.1;Name=WP_135400754.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461934.1;locus_tag=C9E94_RS01570;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_135400754.1;transl_table=11
NZ_PYJR01000019.1	RefSeq	gene	9940	11358	.	+	.	ID=gene-C9E94_RS01575;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=C9E94_RS01575;old_locus_tag=C9E94_01610
NZ_PYJR01000019.1	Protein Homology	CDS	9940	11358	.	+	0	ID=cds-WP_000253650.1;Parent=gene-C9E94_RS01575;Dbxref=GenBank:WP_000253650.1;Name=WP_000253650.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461933.1;locus_tag=C9E94_RS01575;product=arabinose-proton symporter AraE;protein_id=WP_000253650.1;transl_table=11
NZ_PYJR01000019.1	RefSeq	gene	11471	12178	.	+	.	ID=gene-C9E94_RS01580;Name=C9E94_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01580;old_locus_tag=C9E94_01615
NZ_PYJR01000019.1	Protein Homology	CDS	11471	12178	.	+	0	ID=cds-WP_001522882.1;Parent=gene-C9E94_RS01580;Dbxref=GenBank:WP_001522882.1;Name=WP_001522882.1;Ontology_term=GO:0008152,GO:0016855;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461932.1;locus_tag=C9E94_RS01580;product=aspartate/glutamate racemase;protein_id=WP_001522882.1;transl_table=11
NZ_PYJR01000019.1	RefSeq	gene	12150	13085	.	-	.	ID=gene-C9E94_RS01585;Name=C9E94_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01585;old_locus_tag=C9E94_01620
NZ_PYJR01000019.1	Protein Homology	CDS	12150	13085	.	-	0	ID=cds-WP_000741798.1;Parent=gene-C9E94_RS01585;Dbxref=GenBank:WP_000741798.1;Name=WP_000741798.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461931.1;locus_tag=C9E94_RS01585;product=LysR family transcriptional regulator;protein_id=WP_000741798.1;transl_table=11
NZ_PYJR01000019.1	RefSeq	gene	13203	14465	.	+	.	ID=gene-C9E94_RS01590;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=C9E94_RS01590;old_locus_tag=C9E94_01625
NZ_PYJR01000019.1	Protein Homology	CDS	13203	14465	.	+	0	ID=cds-WP_135400755.1;Parent=gene-C9E94_RS01590;Dbxref=GenBank:WP_135400755.1;Name=WP_135400755.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461930.1;locus_tag=C9E94_RS01590;product=diaminopimelate decarboxylase;protein_id=WP_135400755.1;transl_table=11
NZ_PYJR01000019.1	RefSeq	gene	14475	15497	.	-	.	ID=gene-C9E94_RS01595;Name=C9E94_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01595;old_locus_tag=C9E94_01630
NZ_PYJR01000019.1	Protein Homology	CDS	14475	15497	.	-	0	ID=cds-WP_000968338.1;Parent=gene-C9E94_RS01595;Dbxref=GenBank:WP_000968338.1;Name=WP_000968338.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461929.1;locus_tag=C9E94_RS01595;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000968338.1;transl_table=11
NZ_PYJR01000019.1	RefSeq	gene	15508	16536	.	-	.	ID=gene-C9E94_RS01600;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=C9E94_RS01600;old_locus_tag=C9E94_01635
NZ_PYJR01000019.1	Protein Homology	CDS	15508	16536	.	-	0	ID=cds-WP_000201030.1;Parent=gene-C9E94_RS01600;Dbxref=GenBank:WP_000201030.1;Name=WP_000201030.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461928.1;locus_tag=C9E94_RS01600;product=HTH-type transcriptional regulator GalR;protein_id=WP_000201030.1;transl_table=11
NZ_PYJR01000019.1	RefSeq	gene	17129	19288	.	+	.	ID=gene-C9E94_RS01615;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=C9E94_RS01615;old_locus_tag=C9E94_01650
NZ_PYJR01000019.1	Protein Homology	CDS	17129	19288	.	+	0	ID=cds-WP_135400756.1;Parent=gene-C9E94_RS01615;Dbxref=GenBank:WP_135400756.1;Name=WP_135400756.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461927.1;locus_tag=C9E94_RS01615;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_135400756.1;transl_table=11
NZ_PYJR01000019.1	RefSeq	gene	19281	20483	.	+	.	ID=gene-C9E94_RS01620;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=C9E94_RS01620;old_locus_tag=C9E94_01655
NZ_PYJR01000019.1	Protein Homology	CDS	19281	20483	.	+	0	ID=cds-WP_000004686.1;Parent=gene-C9E94_RS01620;Dbxref=GenBank:WP_000004686.1;Name=WP_000004686.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461926.1;locus_tag=C9E94_RS01620;product=lysophospholipid transporter LplT;protein_id=WP_000004686.1;transl_table=11
NZ_PYJR01000019.1	RefSeq	gene	20570	21610	.	-	.	ID=gene-C9E94_RS01625;Name=C9E94_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01625;old_locus_tag=C9E94_01660
NZ_PYJR01000019.1	Protein Homology	CDS	20570	21610	.	-	0	ID=cds-WP_000558960.1;Parent=gene-C9E94_RS01625;Dbxref=GenBank:WP_000558960.1;Name=WP_000558960.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461925.1;locus_tag=C9E94_RS01625;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_000558960.1;transl_table=11
NZ_PYJR01000019.1	RefSeq	gene	21801	22019	.	-	.	ID=gene-C9E94_RS01630;Name=C9E94_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01630;old_locus_tag=C9E94_01665
NZ_PYJR01000019.1	Protein Homology	CDS	21801	22019	.	-	0	ID=cds-WP_000758662.1;Parent=gene-C9E94_RS01630;Dbxref=GenBank:WP_000758662.1;Name=WP_000758662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461924.1;locus_tag=C9E94_RS01630;product=YgdI/YgdR family lipoprotein;protein_id=WP_000758662.1;transl_table=11
NZ_PYJR01000019.1	RefSeq	gene	22189	22902	.	-	.	ID=gene-C9E94_RS01635;Name=C9E94_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01635;old_locus_tag=C9E94_01670
NZ_PYJR01000019.1	Protein Homology	CDS	22189	22902	.	-	0	ID=cds-WP_000895635.1;Parent=gene-C9E94_RS01635;Dbxref=GenBank:WP_000895635.1;Name=WP_000895635.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461923.1;locus_tag=C9E94_RS01635;product=TerC family protein;protein_id=WP_000895635.1;transl_table=11
NZ_PYJR01000019.1	RefSeq	gene	23084	23779	.	-	.	ID=gene-C9E94_RS01640;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=C9E94_RS01640;old_locus_tag=C9E94_01675
NZ_PYJR01000019.1	Protein Homology	CDS	23084	23779	.	-	0	ID=cds-WP_001274930.1;Parent=gene-C9E94_RS01640;Dbxref=GenBank:WP_001274930.1;Name=WP_001274930.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461922.1;locus_tag=C9E94_RS01640;product=DNA mismatch repair endonuclease MutH;protein_id=WP_001274930.1;transl_table=11
NZ_PYJR01000019.1	RefSeq	gene	24462	24992	.	+	.	ID=gene-C9E94_RS01645;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=C9E94_RS01645;old_locus_tag=C9E94_01680
NZ_PYJR01000019.1	Protein Homology	CDS	24462	24992	.	+	0	ID=cds-WP_000564481.1;Parent=gene-C9E94_RS01645;Dbxref=GenBank:WP_000564481.1;Name=WP_000564481.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=C9E94_RS01645;product=RNA pyrophosphohydrolase;protein_id=WP_000564481.1;transl_table=11
NZ_PYJR01000019.1	RefSeq	gene	25005	27251	.	+	.	ID=gene-C9E94_RS01650;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=C9E94_RS01650;old_locus_tag=C9E94_01685
NZ_PYJR01000019.1	Protein Homology	CDS	25005	27251	.	+	0	ID=cds-WP_079986906.1;Parent=gene-C9E94_RS01650;Dbxref=GenBank:WP_079986906.1;Name=WP_079986906.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461920.1;locus_tag=C9E94_RS01650;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_079986906.1;transl_table=11
NZ_PYJR01000019.1	RefSeq	gene	27467	28342	.	+	.	ID=gene-C9E94_RS01655;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=C9E94_RS01655;old_locus_tag=C9E94_01690
NZ_PYJR01000019.1	Protein Homology	CDS	27467	28342	.	+	0	ID=cds-WP_000204647.1;Parent=gene-C9E94_RS01655;Dbxref=GenBank:WP_000204647.1;Name=WP_000204647.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461919.1;locus_tag=C9E94_RS01655;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204647.1;transl_table=11
NZ_PYJR01000019.1	RefSeq	gene	28349	29143	.	+	.	ID=gene-C9E94_RS01660;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=C9E94_RS01660;old_locus_tag=C9E94_01695
NZ_PYJR01000019.1	Protein Homology	CDS	28349	29143	.	+	0	ID=cds-WP_000816247.1;Parent=gene-C9E94_RS01660;Dbxref=GenBank:WP_000816247.1;Name=WP_000816247.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=C9E94_RS01660;product=thymidylate synthase;protein_id=WP_000816247.1;transl_table=11
##sequence-region NZ_PYJR01000023.1 1 28410
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000023.1	RefSeq	region	1	28410	.	+	.	ID=NZ_PYJR01000023.1:1..28410;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000023.1	RefSeq	gene	328	768	.	+	.	ID=gene-C9E94_RS02065;Name=C9E94_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02065;old_locus_tag=C9E94_02120
NZ_PYJR01000023.1	Protein Homology	CDS	328	768	.	+	0	ID=cds-WP_000901960.1;Parent=gene-C9E94_RS02065;Dbxref=GenBank:WP_000901960.1;Name=WP_000901960.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459183.1;locus_tag=C9E94_RS02065;product=PTS sugar transporter subunit IIA;protein_id=WP_000901960.1;transl_table=11
NZ_PYJR01000023.1	RefSeq	gene	830	2059	.	+	.	ID=gene-C9E94_RS02070;Name=C9E94_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02070;old_locus_tag=C9E94_02125
NZ_PYJR01000023.1	Protein Homology	CDS	830	2059	.	+	0	ID=cds-WP_024148869.1;Parent=gene-C9E94_RS02070;Dbxref=GenBank:WP_024148869.1;Name=WP_024148869.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459184.1;locus_tag=C9E94_RS02070;product=polysaccharide deacetylase family protein;protein_id=WP_024148869.1;transl_table=11
NZ_PYJR01000023.1	RefSeq	gene	2061	3122	.	-	.	ID=gene-C9E94_RS02075;Name=C9E94_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02075;old_locus_tag=C9E94_02130
NZ_PYJR01000023.1	Protein Homology	CDS	2061	3122	.	-	0	ID=cds-WP_023237301.1;Parent=gene-C9E94_RS02075;Dbxref=GenBank:WP_023237301.1;Name=WP_023237301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506595.1;locus_tag=C9E94_RS02075;product=fimbrial protein StkG;protein_id=WP_023237301.1;transl_table=11
NZ_PYJR01000023.1	RefSeq	gene	3134	3733	.	-	.	ID=gene-C9E94_RS02080;Name=C9E94_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02080;old_locus_tag=C9E94_02135
NZ_PYJR01000023.1	Protein Homology	CDS	3134	3733	.	-	0	ID=cds-WP_001186615.1;Parent=gene-C9E94_RS02080;Dbxref=GenBank:WP_001186615.1;Name=WP_001186615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001186618.1;locus_tag=C9E94_RS02080;product=fimbrial-like protein;protein_id=WP_001186615.1;transl_table=11
NZ_PYJR01000023.1	RefSeq	gene	3752	4309	.	-	.	ID=gene-C9E94_RS02085;Name=C9E94_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02085;old_locus_tag=C9E94_02140
NZ_PYJR01000023.1	Protein Homology	CDS	3752	4309	.	-	0	ID=cds-WP_000673423.1;Parent=gene-C9E94_RS02085;Dbxref=GenBank:WP_000673423.1;Name=WP_000673423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504756.1;locus_tag=C9E94_RS02085;product=fimbrial protein;protein_id=WP_000673423.1;transl_table=11
NZ_PYJR01000023.1	RefSeq	gene	4336	4920	.	-	.	ID=gene-C9E94_RS02090;Name=C9E94_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02090;old_locus_tag=C9E94_02145
NZ_PYJR01000023.1	Protein Homology	CDS	4336	4920	.	-	0	ID=cds-WP_001267118.1;Parent=gene-C9E94_RS02090;Dbxref=GenBank:WP_001267118.1;Name=WP_001267118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001267117.1;locus_tag=C9E94_RS02090;product=fimbrial protein;protein_id=WP_001267118.1;transl_table=11
NZ_PYJR01000023.1	RefSeq	gene	4943	7540	.	-	.	ID=gene-C9E94_RS02095;Name=C9E94_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02095;old_locus_tag=C9E94_02150
NZ_PYJR01000023.1	Protein Homology	CDS	4943	7540	.	-	0	ID=cds-WP_079986749.1;Parent=gene-C9E94_RS02095;Dbxref=GenBank:WP_079986749.1;Name=WP_079986749.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441536.1;locus_tag=C9E94_RS02095;product=outer membrane usher protein;protein_id=WP_079986749.1;transl_table=11
NZ_PYJR01000023.1	RefSeq	gene	7608	8360	.	-	.	ID=gene-C9E94_RS02100;Name=C9E94_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02100;old_locus_tag=C9E94_02155
NZ_PYJR01000023.1	Protein Homology	CDS	7608	8360	.	-	0	ID=cds-WP_000024306.1;Parent=gene-C9E94_RS02100;Dbxref=GenBank:WP_000024306.1;Name=WP_000024306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000248438.1;locus_tag=C9E94_RS02100;product=fimbrial chaperone;protein_id=WP_000024306.1;transl_table=11
NZ_PYJR01000023.1	RefSeq	gene	8447	9052	.	-	.	ID=gene-C9E94_RS02105;Name=stkA;gbkey=Gene;gene=stkA;gene_biotype=protein_coding;locus_tag=C9E94_RS02105;old_locus_tag=C9E94_02160
NZ_PYJR01000023.1	Protein Homology	CDS	8447	9052	.	-	0	ID=cds-WP_000466116.1;Parent=gene-C9E94_RS02105;Dbxref=GenBank:WP_000466116.1;Name=WP_000466116.1;gbkey=CDS;gene=stkA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000466117.1;locus_tag=C9E94_RS02105;product=Stk fimbria major subunit StkA;protein_id=WP_000466116.1;transl_table=11
NZ_PYJR01000023.1	RefSeq	gene	9330	9710	.	-	.	ID=gene-C9E94_RS02110;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=C9E94_RS02110;old_locus_tag=C9E94_02165
NZ_PYJR01000023.1	Protein Homology	CDS	9330	9710	.	-	0	ID=cds-WP_000621526.1;Parent=gene-C9E94_RS02110;Dbxref=GenBank:WP_000621526.1;Name=WP_000621526.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=C9E94_RS02110;product=aspartate 1-decarboxylase;protein_id=WP_000621526.1;transl_table=11
NZ_PYJR01000023.1	RefSeq	gene	9805	10659	.	-	.	ID=gene-C9E94_RS02115;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=C9E94_RS02115;old_locus_tag=C9E94_02170
NZ_PYJR01000023.1	Protein Homology	CDS	9805	10659	.	-	0	ID=cds-WP_000905350.1;Parent=gene-C9E94_RS02115;Dbxref=GenBank:WP_000905350.1;Name=WP_000905350.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459186.1;locus_tag=C9E94_RS02115;product=pantoate--beta-alanine ligase;protein_id=WP_000905350.1;transl_table=11
NZ_PYJR01000023.1	RefSeq	gene	10785	11576	.	-	.	ID=gene-C9E94_RS02120;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=C9E94_RS02120;old_locus_tag=C9E94_02175
NZ_PYJR01000023.1	Protein Homology	CDS	10785	11576	.	-	0	ID=cds-WP_023993177.1;Parent=gene-C9E94_RS02120;Dbxref=GenBank:WP_023993177.1;Name=WP_023993177.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=C9E94_RS02120;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_023993177.1;transl_table=11
NZ_PYJR01000023.1	RefSeq	gene	11697	12176	.	-	.	ID=gene-C9E94_RS02125;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=C9E94_RS02125;old_locus_tag=C9E94_02180
NZ_PYJR01000023.1	Protein Homology	CDS	11697	12176	.	-	0	ID=cds-WP_000150779.1;Parent=gene-C9E94_RS02125;Dbxref=GenBank:WP_000150779.1;Name=WP_000150779.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459188.1;locus_tag=C9E94_RS02125;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_000150779.1;transl_table=11
NZ_PYJR01000023.1	RefSeq	gene	12173	13570	.	-	.	ID=gene-C9E94_RS02130;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=C9E94_RS02130;old_locus_tag=C9E94_02185
NZ_PYJR01000023.1	Protein Homology	CDS	12173	13570	.	-	0	ID=cds-WP_204367155.1;Parent=gene-C9E94_RS02130;Dbxref=GenBank:WP_204367155.1;Name=WP_204367155.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=C9E94_RS02130;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_204367155.1;transl_table=11
NZ_PYJR01000023.1	RefSeq	gene	13732	14628	.	-	.	ID=gene-C9E94_RS02135;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=C9E94_RS02135;old_locus_tag=C9E94_02190
NZ_PYJR01000023.1	Protein Homology	CDS	13732	14628	.	-	0	ID=cds-WP_001667835.1;Parent=gene-C9E94_RS02135;Dbxref=GenBank:WP_001667835.1;Name=WP_001667835.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549989.1;locus_tag=C9E94_RS02135;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_001667835.1;transl_table=11
NZ_PYJR01000023.1	RefSeq	gene	14697	15152	.	-	.	ID=gene-C9E94_RS02140;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=C9E94_RS02140;old_locus_tag=C9E94_02195
NZ_PYJR01000023.1	Protein Homology	CDS	14697	15152	.	-	0	ID=cds-WP_001155232.1;Parent=gene-C9E94_RS02140;Dbxref=GenBank:WP_001155232.1;Name=WP_001155232.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=C9E94_RS02140;product=RNA polymerase-binding protein DksA;protein_id=WP_001155232.1;transl_table=11
NZ_PYJR01000023.1	RefSeq	gene	15329	16033	.	-	.	ID=gene-C9E94_RS02145;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=C9E94_RS02145;old_locus_tag=C9E94_02200
NZ_PYJR01000023.1	Protein Homology	CDS	15329	16033	.	-	0	ID=cds-WP_000899412.1;Parent=gene-C9E94_RS02145;Dbxref=GenBank:WP_000899412.1;Name=WP_000899412.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459192.1;locus_tag=C9E94_RS02145;product=DNA/RNA nuclease SfsA;protein_id=WP_000899412.1;transl_table=11
NZ_PYJR01000023.1	RefSeq	gene	16050	16580	.	-	.	ID=gene-C9E94_RS02150;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=C9E94_RS02150;old_locus_tag=C9E94_02205
NZ_PYJR01000023.1	Protein Homology	CDS	16050	16580	.	-	0	ID=cds-WP_135400786.1;Parent=gene-C9E94_RS02150;Dbxref=GenBank:WP_135400786.1;Name=WP_135400786.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459193.1;locus_tag=C9E94_RS02150;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_135400786.1;transl_table=11
NZ_PYJR01000023.1	RefSeq	gene	16653	19082	.	+	.	ID=gene-C9E94_RS02155;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=C9E94_RS02155;old_locus_tag=C9E94_02210
NZ_PYJR01000023.1	Protein Homology	CDS	16653	19082	.	+	0	ID=cds-WP_167853637.1;Parent=gene-C9E94_RS02155;Dbxref=GenBank:WP_167853637.1;Name=WP_167853637.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414690.4;locus_tag=C9E94_RS02155;product=ATP-dependent helicase HrpB;protein_id=WP_167853637.1;transl_table=11
NZ_PYJR01000023.1	RefSeq	gene	19223	21745	.	+	.	ID=gene-C9E94_RS02160;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=C9E94_RS02160;old_locus_tag=C9E94_02215
NZ_PYJR01000023.1	Protein Homology	CDS	19223	21745	.	+	0	ID=cds-WP_023254682.1;Parent=gene-C9E94_RS02160;Dbxref=GenBank:WP_023254682.1;Name=WP_023254682.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459195.1;locus_tag=C9E94_RS02160;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_023254682.1;transl_table=11
NZ_PYJR01000023.1	RefSeq	gene	22044	24233	.	+	.	ID=gene-C9E94_RS02165;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=C9E94_RS02165;old_locus_tag=C9E94_02220
NZ_PYJR01000023.1	Protein Homology	CDS	22044	24233	.	+	0	ID=cds-WP_023993174.1;Parent=gene-C9E94_RS02165;Dbxref=GenBank:WP_023993174.1;Name=WP_023993174.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459196.1;locus_tag=C9E94_RS02165;product=ferrichrome porin FhuA;protein_id=WP_023993174.1;transl_table=11
NZ_PYJR01000023.1	RefSeq	gene	24282	25079	.	+	.	ID=gene-C9E94_RS02170;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=C9E94_RS02170;old_locus_tag=C9E94_02225
NZ_PYJR01000023.1	Protein Homology	CDS	24282	25079	.	+	0	ID=cds-WP_001157203.1;Parent=gene-C9E94_RS02170;Dbxref=GenBank:WP_001157203.1;Name=WP_001157203.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459197.1;locus_tag=C9E94_RS02170;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_001157203.1;transl_table=11
NZ_PYJR01000023.1	RefSeq	gene	25079	25969	.	+	.	ID=gene-C9E94_RS02175;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=C9E94_RS02175;old_locus_tag=C9E94_02230
NZ_PYJR01000023.1	Protein Homology	CDS	25079	25969	.	+	0	ID=cds-WP_001205358.1;Parent=gene-C9E94_RS02175;Dbxref=GenBank:WP_001205358.1;Name=WP_001205358.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459198.1;locus_tag=C9E94_RS02175;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_001205358.1;transl_table=11
NZ_PYJR01000023.1	RefSeq	gene	25984	28023	.	+	.	ID=gene-C9E94_RS02180;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=C9E94_RS02180;old_locus_tag=C9E94_02235
NZ_PYJR01000023.1	Protein Homology	CDS	25984	28023	.	+	0	ID=cds-WP_135400788.1;Parent=gene-C9E94_RS02180;Dbxref=GenBank:WP_135400788.1;Name=WP_135400788.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=C9E94_RS02180;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_135400788.1;transl_table=11
##sequence-region NZ_PYJR01000087.1 1 28367
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000087.1	RefSeq	region	1	28367	.	+	.	ID=NZ_PYJR01000087.1:1..28367;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000087.1	RefSeq	gene	1	133	.	-	.	ID=gene-C9E94_RS11695;Name=C9E94_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11695;old_locus_tag=C9E94_11965;partial=true;start_range=.,1
NZ_PYJR01000087.1	Protein Homology	CDS	1	133	.	-	0	ID=cds-WP_439895940.1-2;Parent=gene-C9E94_RS11695;Dbxref=GenBank:WP_439895940.1;Name=WP_439895940.1;Ontology_term=GO:0071973,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461698.1;locus_tag=C9E94_RS11695;partial=true;product=flagellin N-terminal helical domain-containing protein;protein_id=WP_439895940.1;start_range=.,1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	390	1793	.	+	.	ID=gene-C9E94_RS11700;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=C9E94_RS11700;old_locus_tag=C9E94_11970
NZ_PYJR01000087.1	Protein Homology	CDS	390	1793	.	+	0	ID=cds-WP_000146806.1;Parent=gene-C9E94_RS11700;Dbxref=GenBank:WP_000146806.1;Name=WP_000146806.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460913.1;locus_tag=C9E94_RS11700;product=flagellar filament capping protein FliD;protein_id=WP_000146806.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	1808	2215	.	+	.	ID=gene-C9E94_RS11705;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=C9E94_RS11705;old_locus_tag=C9E94_11975
NZ_PYJR01000087.1	Protein Homology	CDS	1808	2215	.	+	0	ID=cds-WP_000287764.1;Parent=gene-C9E94_RS11705;Dbxref=GenBank:WP_000287764.1;Name=WP_000287764.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460914.1;locus_tag=C9E94_RS11705;product=flagellar export chaperone FliS;protein_id=WP_000287764.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	2215	2583	.	+	.	ID=gene-C9E94_RS11710;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=C9E94_RS11710;old_locus_tag=C9E94_11980
NZ_PYJR01000087.1	Protein Homology	CDS	2215	2583	.	+	0	ID=cds-WP_000204899.1;Parent=gene-C9E94_RS11710;Dbxref=GenBank:WP_000204899.1;Name=WP_000204899.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460915.1;locus_tag=C9E94_RS11710;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_000204899.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	2655	4139	.	+	.	ID=gene-C9E94_RS11715;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=C9E94_RS11715;old_locus_tag=C9E94_11985
NZ_PYJR01000087.1	Protein Homology	CDS	2655	4139	.	+	0	ID=cds-WP_135401036.1;Parent=gene-C9E94_RS11715;Dbxref=GenBank:WP_135401036.1;Name=WP_135401036.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460916.1;locus_tag=C9E94_RS11715;product=alpha-amylase;protein_id=WP_135401036.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	4179	4604	.	-	.	ID=gene-C9E94_RS11720;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=C9E94_RS11720;old_locus_tag=C9E94_11990
NZ_PYJR01000087.1	Protein Homology	CDS	4179	4604	.	-	0	ID=cds-WP_000754695.1;Parent=gene-C9E94_RS11720;Dbxref=GenBank:WP_000754695.1;Name=WP_000754695.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460917.1;locus_tag=C9E94_RS11720;product=lipoprotein YedD;protein_id=WP_000754695.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	4790	5995	.	+	.	ID=gene-C9E94_RS11725;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=C9E94_RS11725;old_locus_tag=C9E94_11995
NZ_PYJR01000087.1	Protein Homology	CDS	4790	5995	.	+	0	ID=cds-WP_001531105.1;Parent=gene-C9E94_RS11725;Dbxref=GenBank:WP_001531105.1;Name=WP_001531105.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156840.1;locus_tag=C9E94_RS11725;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_001531105.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	5992	6225	.	+	.	ID=gene-C9E94_RS11730;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=C9E94_RS11730;old_locus_tag=C9E94_12000
NZ_PYJR01000087.1	Protein Homology	CDS	5992	6225	.	+	0	ID=cds-WP_000790504.1;Parent=gene-C9E94_RS11730;Dbxref=GenBank:WP_000790504.1;Name=WP_000790504.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=C9E94_RS11730;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_000790504.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	6491	6877	.	+	.	ID=gene-C9E94_RS11735;Name=C9E94_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11735;old_locus_tag=C9E94_12005
NZ_PYJR01000087.1	Protein Homology	CDS	6491	6877	.	+	0	ID=cds-WP_001629111.1;Parent=gene-C9E94_RS11735;Dbxref=GenBank:WP_001629111.1;Name=WP_001629111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448379.1;locus_tag=C9E94_RS11735;product=hypothetical protein;protein_id=WP_001629111.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	6998	7312	.	-	.	ID=gene-C9E94_RS11740;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=C9E94_RS11740;old_locus_tag=C9E94_12010
NZ_PYJR01000087.1	Protein Homology	CDS	6998	7312	.	-	0	ID=cds-WP_000719042.1;Parent=gene-C9E94_RS11740;Dbxref=GenBank:WP_000719042.1;Name=WP_000719042.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460921.1;locus_tag=C9E94_RS11740;product=flagellar hook-basal body complex protein FliE;protein_id=WP_000719042.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	7529	9211	.	+	.	ID=gene-C9E94_RS11745;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=C9E94_RS11745;old_locus_tag=C9E94_12015
NZ_PYJR01000087.1	Protein Homology	CDS	7529	9211	.	+	0	ID=cds-WP_001276833.1;Parent=gene-C9E94_RS11745;Dbxref=GenBank:WP_001276833.1;Name=WP_001276833.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460922.1;locus_tag=C9E94_RS11745;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_001276833.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	9204	10199	.	+	.	ID=gene-C9E94_RS11750;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=C9E94_RS11750;old_locus_tag=C9E94_12020
NZ_PYJR01000087.1	Protein Homology	CDS	9204	10199	.	+	0	ID=cds-WP_000067735.1;Parent=gene-C9E94_RS11750;Dbxref=GenBank:WP_000067735.1;Name=WP_000067735.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460923.1;locus_tag=C9E94_RS11750;product=flagellar motor switch protein FliG;protein_id=WP_000067735.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	10192	10899	.	+	.	ID=gene-C9E94_RS11755;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=C9E94_RS11755;old_locus_tag=C9E94_12025
NZ_PYJR01000087.1	Protein Homology	CDS	10192	10899	.	+	0	ID=cds-WP_000064158.1;Parent=gene-C9E94_RS11755;Dbxref=GenBank:WP_000064158.1;Name=WP_000064158.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460924.1;locus_tag=C9E94_RS11755;product=flagellar assembly protein FliH;protein_id=WP_000064158.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	10899	12269	.	+	.	ID=gene-C9E94_RS11760;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=C9E94_RS11760;old_locus_tag=C9E94_12030
NZ_PYJR01000087.1	Protein Homology	CDS	10899	12269	.	+	0	ID=cds-WP_000213257.1;Parent=gene-C9E94_RS11760;Dbxref=GenBank:WP_000213257.1;Name=WP_000213257.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460925.1;locus_tag=C9E94_RS11760;product=flagellar protein export ATPase FliI;protein_id=WP_000213257.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	12291	12734	.	+	.	ID=gene-C9E94_RS11765;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=C9E94_RS11765;old_locus_tag=C9E94_12035
NZ_PYJR01000087.1	Protein Homology	CDS	12291	12734	.	+	0	ID=cds-WP_000046981.1;Parent=gene-C9E94_RS11765;Dbxref=GenBank:WP_000046981.1;Name=WP_000046981.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460926.1;locus_tag=C9E94_RS11765;product=flagellar export protein FliJ;protein_id=WP_000046981.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	12731	13960	.	+	.	ID=gene-C9E94_RS11770;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=C9E94_RS11770;old_locus_tag=C9E94_12040
NZ_PYJR01000087.1	Protein Homology	CDS	12731	13960	.	+	0	ID=cds-WP_135401037.1;Parent=gene-C9E94_RS11770;Dbxref=GenBank:WP_135401037.1;Name=WP_135401037.1;Ontology_term=GO:0044780,GO:0009424;gbkey=CDS;gene=fliK;go_component=bacterial-type flagellum hook|0009424||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460927.1;locus_tag=C9E94_RS11770;product=flagellar hook length control protein FliK;protein_id=WP_135401037.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	14065	14538	.	+	.	ID=gene-C9E94_RS11775;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=C9E94_RS11775;old_locus_tag=C9E94_12045
NZ_PYJR01000087.1	Protein Homology	CDS	14065	14538	.	+	0	ID=cds-WP_135401038.1;Parent=gene-C9E94_RS11775;Dbxref=GenBank:WP_135401038.1;Name=WP_135401038.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460928.1;locus_tag=C9E94_RS11775;product=flagellar basal body-associated protein FliL;protein_id=WP_135401038.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	14543	15547	.	+	.	ID=gene-C9E94_RS11780;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=C9E94_RS11780;old_locus_tag=C9E94_12050
NZ_PYJR01000087.1	Protein Homology	CDS	14543	15547	.	+	0	ID=cds-WP_000502811.1;Parent=gene-C9E94_RS11780;Dbxref=GenBank:WP_000502811.1;Name=WP_000502811.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=C9E94_RS11780;product=flagellar motor switch protein FliM;protein_id=WP_000502811.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	15544	15957	.	+	.	ID=gene-C9E94_RS11785;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=C9E94_RS11785;old_locus_tag=C9E94_12055
NZ_PYJR01000087.1	Protein Homology	CDS	15544	15957	.	+	0	ID=cds-WP_001282111.1;Parent=gene-C9E94_RS11785;Dbxref=GenBank:WP_001282111.1;Name=WP_001282111.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460930.1;locus_tag=C9E94_RS11785;product=flagellar motor switch protein FliN;protein_id=WP_001282111.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	15957	16334	.	+	.	ID=gene-C9E94_RS11790;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=C9E94_RS11790;old_locus_tag=C9E94_12060
NZ_PYJR01000087.1	Protein Homology	CDS	15957	16334	.	+	0	ID=cds-WP_000978276.1;Parent=gene-C9E94_RS11790;Dbxref=GenBank:WP_000978276.1;Name=WP_000978276.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460931.3;locus_tag=C9E94_RS11790;product=flagellar biosynthetic protein FliO;protein_id=WP_000978276.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	16334	17071	.	+	.	ID=gene-C9E94_RS11795;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=C9E94_RS11795;old_locus_tag=C9E94_12065
NZ_PYJR01000087.1	Protein Homology	CDS	16334	17071	.	+	0	ID=cds-WP_001253414.1;Parent=gene-C9E94_RS11795;Dbxref=GenBank:WP_001253414.1;Name=WP_001253414.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460932.1;locus_tag=C9E94_RS11795;product=flagellar type III secretion system pore protein FliP;protein_id=WP_001253414.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	17081	17350	.	+	.	ID=gene-C9E94_RS11800;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=C9E94_RS11800;old_locus_tag=C9E94_12070
NZ_PYJR01000087.1	Protein Homology	CDS	17081	17350	.	+	0	ID=cds-WP_000187355.1;Parent=gene-C9E94_RS11800;Dbxref=GenBank:WP_000187355.1;Name=WP_000187355.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=C9E94_RS11800;product=flagellar biosynthesis protein FliQ;protein_id=WP_000187355.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	17359	18153	.	+	.	ID=gene-C9E94_RS11805;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=C9E94_RS11805;old_locus_tag=C9E94_12075
NZ_PYJR01000087.1	Protein Homology	CDS	17359	18153	.	+	0	ID=cds-WP_000616953.1;Parent=gene-C9E94_RS11805;Dbxref=GenBank:WP_000616953.1;Name=WP_000616953.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460934.1;locus_tag=C9E94_RS11805;product=flagellar biosynthetic protein FliR;protein_id=WP_000616953.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	18435	19058	.	+	.	ID=gene-C9E94_RS11810;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=C9E94_RS11810;old_locus_tag=C9E94_12080
NZ_PYJR01000087.1	Protein Homology	CDS	18435	19058	.	+	0	ID=cds-WP_000103971.1;Parent=gene-C9E94_RS11810;Dbxref=GenBank:WP_000103971.1;Name=WP_000103971.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460935.1;locus_tag=C9E94_RS11810;product=transcriptional regulator RcsA;protein_id=WP_000103971.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	19097	19291	.	-	.	ID=gene-C9E94_RS11815;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=C9E94_RS11815;old_locus_tag=C9E94_12085
NZ_PYJR01000087.1	Protein Homology	CDS	19097	19291	.	-	0	ID=cds-WP_000867218.1;Parent=gene-C9E94_RS11815;Dbxref=GenBank:WP_000867218.1;Name=WP_000867218.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736680.1;locus_tag=C9E94_RS11815;product=protein DsrB;protein_id=WP_000867218.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	19420	19647	.	+	.	ID=gene-C9E94_RS11820;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=C9E94_RS11820;old_locus_tag=C9E94_12090
NZ_PYJR01000087.1	Protein Homology	CDS	19420	19647	.	+	0	ID=cds-WP_000844798.1;Parent=gene-C9E94_RS11820;Dbxref=GenBank:WP_000844798.1;Name=WP_000844798.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460936.1;locus_tag=C9E94_RS11820;product=YodD family peroxide/acid resistance protein;protein_id=WP_000844798.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	19957	20772	.	+	.	ID=gene-C9E94_RS11825;Name=C9E94_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11825;old_locus_tag=C9E94_12095
NZ_PYJR01000087.1	Protein Homology	CDS	19957	20772	.	+	0	ID=cds-WP_000948794.1;Parent=gene-C9E94_RS11825;Dbxref=GenBank:WP_000948794.1;Name=WP_000948794.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460937.1;locus_tag=C9E94_RS11825;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WP_000948794.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	20751	22463	.	-	.	ID=gene-C9E94_RS11830;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=C9E94_RS11830;old_locus_tag=C9E94_12100
NZ_PYJR01000087.1	Protein Homology	CDS	20751	22463	.	-	0	ID=cds-WP_001119834.1;Parent=gene-C9E94_RS11830;Dbxref=GenBank:WP_001119834.1;Name=WP_001119834.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460938.1;locus_tag=C9E94_RS11830;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_001119834.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	22628	22813	.	-	.	ID=gene-C9E94_RS11835;Name=C9E94_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11835;old_locus_tag=C9E94_12105
NZ_PYJR01000087.1	Protein Homology	CDS	22628	22813	.	-	0	ID=cds-WP_001521741.1;Parent=gene-C9E94_RS11835;Dbxref=GenBank:WP_001521741.1;Name=WP_001521741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549490.1;locus_tag=C9E94_RS11835;product=YodC family protein;protein_id=WP_001521741.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	22890	23807	.	-	.	ID=gene-C9E94_RS11840;Name=C9E94_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11840;old_locus_tag=C9E94_12110
NZ_PYJR01000087.1	Protein Homology	CDS	22890	23807	.	-	0	ID=cds-WP_085920526.1;Parent=gene-C9E94_RS11840;Dbxref=GenBank:WP_085920526.1;Name=WP_085920526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=C9E94_RS11840;product=DUF808 domain-containing protein;protein_id=WP_085920526.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	23977	24897	.	+	.	ID=gene-C9E94_RS11845;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=C9E94_RS11845;old_locus_tag=C9E94_12115
NZ_PYJR01000087.1	Protein Homology	CDS	23977	24897	.	+	0	ID=cds-WP_001212263.1;Parent=gene-C9E94_RS11845;Dbxref=GenBank:WP_001212263.1;Name=WP_001212263.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460941.1;locus_tag=C9E94_RS11845;product=drug/metabolite exporter YedA;protein_id=WP_001212263.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	24886	25356	.	-	.	ID=gene-C9E94_RS11850;Name=C9E94_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11850;old_locus_tag=C9E94_12120
NZ_PYJR01000087.1	Protein Homology	CDS	24886	25356	.	-	0	ID=cds-WP_000785978.1;Parent=gene-C9E94_RS11850;Dbxref=GenBank:WP_000785978.1;Name=WP_000785978.1;Ontology_term=GO:0006298,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460942.1;locus_tag=C9E94_RS11850;product=very short patch repair endonuclease;protein_id=WP_000785978.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	25337	26767	.	-	.	ID=gene-C9E94_RS11855;Name=C9E94_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11855;old_locus_tag=C9E94_12125
NZ_PYJR01000087.1	Protein Homology	CDS	25337	26767	.	-	0	ID=cds-WP_001157305.1;Parent=gene-C9E94_RS11855;Dbxref=GenBank:WP_001157305.1;Name=WP_001157305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460943.1;locus_tag=C9E94_RS11855;product=DNA cytosine methyltransferase;protein_id=WP_001157305.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	26841	27536	.	-	.	ID=gene-C9E94_RS11860;Name=C9E94_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11860;old_locus_tag=C9E94_12130
NZ_PYJR01000087.1	Protein Homology	CDS	26841	27536	.	-	0	ID=cds-WP_000377040.1;Parent=gene-C9E94_RS11860;Dbxref=GenBank:WP_000377040.1;Name=WP_000377040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460944.1;locus_tag=C9E94_RS11860;product=phosphohydrolase;protein_id=WP_000377040.1;transl_table=11
NZ_PYJR01000087.1	RefSeq	gene	27616	27927	.	-	.	ID=gene-C9E94_RS11865;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=C9E94_RS11865;old_locus_tag=C9E94_12135
NZ_PYJR01000087.1	Protein Homology	CDS	27616	27927	.	-	0	ID=cds-WP_000107437.1;Parent=gene-C9E94_RS11865;Dbxref=GenBank:WP_000107437.1;Name=WP_000107437.1;Ontology_term=GO:0051301;gbkey=CDS;gene=drpB;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460945.1;locus_tag=C9E94_RS11865;product=cell division protein DrpB;protein_id=WP_000107437.1;transl_table=11
##sequence-region NZ_PYJR01000107.1 1 28123
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000107.1	RefSeq	region	1	28123	.	+	.	ID=NZ_PYJR01000107.1:1..28123;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000107.1	RefSeq	gene	146	1585	.	+	.	ID=gene-C9E94_RS16260;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=C9E94_RS16260;old_locus_tag=C9E94_16645
NZ_PYJR01000107.1	Protein Homology	CDS	146	1585	.	+	0	ID=cds-WP_000026011.1;Parent=gene-C9E94_RS16260;Dbxref=GenBank:WP_000026011.1;Name=WP_000026011.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461761.1;locus_tag=C9E94_RS16260;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_000026011.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	1582	2715	.	+	.	ID=gene-C9E94_RS16265;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=C9E94_RS16265;old_locus_tag=C9E94_16650
NZ_PYJR01000107.1	Protein Homology	CDS	1582	2715	.	+	0	ID=cds-WP_000086329.1;Parent=gene-C9E94_RS16265;Dbxref=GenBank:WP_000086329.1;Name=WP_000086329.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461762.1;locus_tag=C9E94_RS16265;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_000086329.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	2812	5052	.	-	.	ID=gene-C9E94_RS16270;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=C9E94_RS16270;old_locus_tag=C9E94_16655
NZ_PYJR01000107.1	Protein Homology	CDS	2812	5052	.	-	0	ID=cds-WP_135401130.1;Parent=gene-C9E94_RS16270;Dbxref=GenBank:WP_135401130.1;Name=WP_135401130.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461763.1;locus_tag=C9E94_RS16270;product=carbamoyltransferase HypF;protein_id=WP_135401130.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	5198	5743	.	-	.	ID=gene-C9E94_RS16275;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=C9E94_RS16275;old_locus_tag=C9E94_16660
NZ_PYJR01000107.1	Protein Homology	CDS	5198	5743	.	-	0	ID=cds-WP_001078791.1;Parent=gene-C9E94_RS16275;Dbxref=GenBank:WP_001078791.1;Name=WP_001078791.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461764.1;locus_tag=C9E94_RS16275;product=electron transport protein HydN;protein_id=WP_001078791.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	5944	6753	.	-	.	ID=gene-C9E94_RS16280;Name=C9E94_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16280;old_locus_tag=C9E94_16665
NZ_PYJR01000107.1	Protein Homology	CDS	5944	6753	.	-	0	ID=cds-WP_023244857.1;Parent=gene-C9E94_RS16280;Dbxref=GenBank:WP_023244857.1;Name=WP_023244857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461765.1;locus_tag=C9E94_RS16280;product=hypothetical protein;protein_id=WP_023244857.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	6780	7250	.	-	.	ID=gene-C9E94_RS16285;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=C9E94_RS16285;old_locus_tag=C9E94_16670
NZ_PYJR01000107.1	Protein Homology	CDS	6780	7250	.	-	0	ID=cds-WP_135401131.1;Parent=gene-C9E94_RS16285;Dbxref=GenBank:WP_135401131.1;Name=WP_135401131.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461766.1;locus_tag=C9E94_RS16285;product=hydrogenase maturation peptidase HycI;protein_id=WP_135401131.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	7243	7653	.	-	.	ID=gene-C9E94_RS16290;Name=C9E94_RS16290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16290;old_locus_tag=C9E94_16675
NZ_PYJR01000107.1	Protein Homology	CDS	7243	7653	.	-	0	ID=cds-WP_000003725.1;Parent=gene-C9E94_RS16290;Dbxref=GenBank:WP_000003725.1;Name=WP_000003725.1;Ontology_term=GO:0065003;gbkey=CDS;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461767.1;locus_tag=C9E94_RS16290;product=formate hydrogenlyase maturation HycH family protein;protein_id=WP_000003725.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	7650	8417	.	-	.	ID=gene-C9E94_RS16295;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=C9E94_RS16295;old_locus_tag=C9E94_16680
NZ_PYJR01000107.1	Protein Homology	CDS	7650	8417	.	-	0	ID=cds-WP_000067419.1;Parent=gene-C9E94_RS16295;Dbxref=GenBank:WP_000067419.1;Name=WP_000067419.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461768.1;locus_tag=C9E94_RS16295;product=formate hydrogenlyase subunit HycG;protein_id=WP_000067419.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	8417	8959	.	-	.	ID=gene-C9E94_RS16300;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=C9E94_RS16300;old_locus_tag=C9E94_16685
NZ_PYJR01000107.1	Protein Homology	CDS	8417	8959	.	-	0	ID=cds-WP_000493773.1;Parent=gene-C9E94_RS16300;Dbxref=GenBank:WP_000493773.1;Name=WP_000493773.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461769.1;locus_tag=C9E94_RS16300;product=formate hydrogenlyase subunit HycF;protein_id=WP_000493773.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	8969	10678	.	-	.	ID=gene-C9E94_RS16305;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=C9E94_RS16305;old_locus_tag=C9E94_16690
NZ_PYJR01000107.1	Protein Homology	CDS	8969	10678	.	-	0	ID=cds-WP_001288155.1;Parent=gene-C9E94_RS16305;Dbxref=GenBank:WP_001288155.1;Name=WP_001288155.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=C9E94_RS16305;product=formate hydrogenlyase subunit HycE;protein_id=WP_001288155.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	10696	11619	.	-	.	ID=gene-C9E94_RS16310;Name=C9E94_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16310;old_locus_tag=C9E94_16695
NZ_PYJR01000107.1	Protein Homology	CDS	10696	11619	.	-	0	ID=cds-WP_000110563.1;Parent=gene-C9E94_RS16310;Dbxref=GenBank:WP_000110563.1;Name=WP_000110563.1;Ontology_term=GO:0022900,GO:0016491,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=oxidoreductase activity|0016491||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461771.1;locus_tag=C9E94_RS16310;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_000110563.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	11622	13448	.	-	.	ID=gene-C9E94_RS16315;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=C9E94_RS16315;old_locus_tag=C9E94_16700
NZ_PYJR01000107.1	Protein Homology	CDS	11622	13448	.	-	0	ID=cds-WP_135401132.1;Parent=gene-C9E94_RS16315;Dbxref=GenBank:WP_135401132.1;Name=WP_135401132.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461772.2;locus_tag=C9E94_RS16315;product=formate hydrogenlyase subunit 3;protein_id=WP_135401132.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	13448	14056	.	-	.	ID=gene-C9E94_RS16320;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=C9E94_RS16320;old_locus_tag=C9E94_16705
NZ_PYJR01000107.1	Protein Homology	CDS	13448	14056	.	-	0	ID=cds-WP_001079163.1;Parent=gene-C9E94_RS16320;Dbxref=GenBank:WP_001079163.1;Name=WP_001079163.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461773.1;locus_tag=C9E94_RS16320;product=formate hydrogenlyase subunit HycB;protein_id=WP_001079163.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	14202	14663	.	-	.	ID=gene-C9E94_RS16325;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=C9E94_RS16325;old_locus_tag=C9E94_16710
NZ_PYJR01000107.1	Protein Homology	CDS	14202	14663	.	-	0	ID=cds-WP_000158074.1;Parent=gene-C9E94_RS16325;Dbxref=GenBank:WP_000158074.1;Name=WP_000158074.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461774.1;locus_tag=C9E94_RS16325;product=formate hydrogenlyase regulator HycA;protein_id=WP_000158074.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	14873	15229	.	+	.	ID=gene-C9E94_RS16335;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=C9E94_RS16335;old_locus_tag=C9E94_16720
NZ_PYJR01000107.1	Protein Homology	CDS	14873	15229	.	+	0	ID=cds-WP_000544461.1;Parent=gene-C9E94_RS16335;Dbxref=GenBank:WP_000544461.1;Name=WP_000544461.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461775.1;locus_tag=C9E94_RS16335;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544461.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	15298	16170	.	+	.	ID=gene-C9E94_RS16340;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=C9E94_RS16340;old_locus_tag=C9E94_16725
NZ_PYJR01000107.1	Protein Homology	CDS	15298	16170	.	+	0	ID=cds-WP_000337646.1;Parent=gene-C9E94_RS16340;Dbxref=GenBank:WP_000337646.1;Name=WP_000337646.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461776.1;locus_tag=C9E94_RS16340;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_000337646.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	16161	16433	.	+	.	ID=gene-C9E94_RS16345;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=C9E94_RS16345;old_locus_tag=C9E94_16730
NZ_PYJR01000107.1	Protein Homology	CDS	16161	16433	.	+	0	ID=cds-WP_000334871.1;Parent=gene-C9E94_RS16345;Dbxref=GenBank:WP_000334871.1;Name=WP_000334871.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461777.1;locus_tag=C9E94_RS16345;product=hydrogenase 3 maturation protein HypC;protein_id=WP_000334871.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	16433	17554	.	+	.	ID=gene-C9E94_RS16350;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=C9E94_RS16350;old_locus_tag=C9E94_16735
NZ_PYJR01000107.1	Protein Homology	CDS	16433	17554	.	+	0	ID=cds-WP_001212962.1;Parent=gene-C9E94_RS16350;Dbxref=GenBank:WP_001212962.1;Name=WP_001212962.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461778.2;locus_tag=C9E94_RS16350;product=hydrogenase formation protein HypD;protein_id=WP_001212962.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	17551	18561	.	+	.	ID=gene-C9E94_RS16355;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=C9E94_RS16355;old_locus_tag=C9E94_16740
NZ_PYJR01000107.1	Protein Homology	CDS	17551	18561	.	+	0	ID=cds-WP_001059959.1;Parent=gene-C9E94_RS16355;Dbxref=GenBank:WP_001059959.1;Name=WP_001059959.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=C9E94_RS16355;product=hydrogenase expression/formation protein HypE;protein_id=WP_001059959.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	18780	20858	.	+	.	ID=gene-C9E94_RS16360;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=C9E94_RS16360;old_locus_tag=C9E94_16745
NZ_PYJR01000107.1	Protein Homology	CDS	18780	20858	.	+	0	ID=cds-WP_000122692.1;Parent=gene-C9E94_RS16360;Dbxref=GenBank:WP_000122692.1;Name=WP_000122692.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461780.1;locus_tag=C9E94_RS16360;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_000122692.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	20920	21264	.	-	.	ID=gene-C9E94_RS16365;Name=C9E94_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16365;old_locus_tag=C9E94_16750
NZ_PYJR01000107.1	Protein Homology	CDS	20920	21264	.	-	0	ID=cds-WP_045901655.1;Parent=gene-C9E94_RS16365;Dbxref=GenBank:WP_045901655.1;Name=WP_045901655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461781.1;locus_tag=C9E94_RS16365;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_045901655.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	21446	22363	.	+	.	ID=gene-C9E94_RS16370;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=C9E94_RS16370;old_locus_tag=C9E94_16755
NZ_PYJR01000107.1	Protein Homology	CDS	21446	22363	.	+	0	ID=cds-WP_000182930.1;Parent=gene-C9E94_RS16370;Dbxref=GenBank:WP_000182930.1;Name=WP_000182930.1;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461782.1;locus_tag=C9E94_RS16370;product=iron/manganese ABC transporter substrate-binding protein SitA;protein_id=WP_000182930.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	22360	23181	.	+	.	ID=gene-C9E94_RS16375;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=C9E94_RS16375;old_locus_tag=C9E94_16760
NZ_PYJR01000107.1	Protein Homology	CDS	22360	23181	.	+	0	ID=cds-WP_135401133.1;Parent=gene-C9E94_RS16375;Dbxref=GenBank:WP_135401133.1;Name=WP_135401133.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461783.1;locus_tag=C9E94_RS16375;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=WP_135401133.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	23178	24038	.	+	.	ID=gene-C9E94_RS16380;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=C9E94_RS16380;old_locus_tag=C9E94_16765
NZ_PYJR01000107.1	Protein Homology	CDS	23178	24038	.	+	0	ID=cds-WP_001104336.1;Parent=gene-C9E94_RS16380;Dbxref=GenBank:WP_001104336.1;Name=WP_001104336.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461784.1;locus_tag=C9E94_RS16380;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WP_001104336.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	24029	24877	.	+	.	ID=gene-C9E94_RS16385;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=C9E94_RS16385;old_locus_tag=C9E94_16770
NZ_PYJR01000107.1	Protein Homology	CDS	24029	24877	.	+	0	ID=cds-WP_000480209.1;Parent=gene-C9E94_RS16385;Dbxref=GenBank:WP_000480209.1;Name=WP_000480209.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461785.1;locus_tag=C9E94_RS16385;product=iron/manganese ABC transporter permease subunit SitD;protein_id=WP_000480209.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	24976	25884	.	-	.	ID=gene-C9E94_RS16390;Name=avrA;gbkey=Gene;gene=avrA;gene_biotype=protein_coding;locus_tag=C9E94_RS16390;old_locus_tag=C9E94_16775
NZ_PYJR01000107.1	Protein Homology	CDS	24976	25884	.	-	0	ID=cds-WP_135401134.1;Parent=gene-C9E94_RS16390;Dbxref=GenBank:WP_135401134.1;Name=WP_135401134.1;gbkey=CDS;gene=avrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461786.1;locus_tag=C9E94_RS16390;product=type III secretion system YopJ family effector AvrA;protein_id=WP_135401134.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	26045	26800	.	-	.	ID=gene-C9E94_RS16395;Name=sprB;gbkey=Gene;gene=sprB;gene_biotype=protein_coding;locus_tag=C9E94_RS16395;old_locus_tag=C9E94_16780
NZ_PYJR01000107.1	Protein Homology	CDS	26045	26800	.	-	0	ID=cds-WP_001246659.1;Parent=gene-C9E94_RS16395;Dbxref=GenBank:WP_001246659.1;Name=WP_001246659.1;gbkey=CDS;gene=sprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461787.1;locus_tag=C9E94_RS16395;product=transcriptional regulator SprB;protein_id=WP_001246659.1;transl_table=11
NZ_PYJR01000107.1	RefSeq	gene	27185	28072	.	-	.	ID=gene-C9E94_RS16400;Name=hilC;gbkey=Gene;gene=hilC;gene_biotype=protein_coding;locus_tag=C9E94_RS16400;old_locus_tag=C9E94_16790
NZ_PYJR01000107.1	Protein Homology	CDS	27185	28072	.	-	0	ID=cds-WP_000243999.1;Parent=gene-C9E94_RS16400;Dbxref=GenBank:WP_000243999.1;Name=WP_000243999.1;gbkey=CDS;gene=hilC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461788.1;locus_tag=C9E94_RS16400;product=invasion transcriptional regulator HilC;protein_id=WP_000243999.1;transl_table=11
##sequence-region NZ_PYJR01000091.1 1 27580
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000091.1	RefSeq	region	1	27580	.	+	.	ID=NZ_PYJR01000091.1:1..27580;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000091.1	RefSeq	gene	1	753	.	-	.	ID=gene-C9E94_RS12020;Name=rfaJ;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=C9E94_RS12020;old_locus_tag=C9E94_12290;partial=true;start_range=.,1
NZ_PYJR01000091.1	Protein Homology	CDS	1	753	.	-	0	ID=cds-WP_075841729.1;Parent=gene-C9E94_RS12020;Dbxref=GenBank:WP_075841729.1;Name=WP_075841729.1;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462617.1;locus_tag=C9E94_RS12020;partial=true;product=lipopolysaccharide 1%2C2-glucosyltransferase RfaJ;protein_id=WP_075841729.1;start_range=.,1;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	771	1784	.	-	.	ID=gene-C9E94_RS12025;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=C9E94_RS12025;old_locus_tag=C9E94_12295
NZ_PYJR01000091.1	Protein Homology	CDS	771	1784	.	-	0	ID=cds-WP_000088479.1;Parent=gene-C9E94_RS12025;Dbxref=GenBank:WP_000088479.1;Name=WP_000088479.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462618.1;locus_tag=C9E94_RS12025;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WP_000088479.1;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	1790	2869	.	-	.	ID=gene-C9E94_RS12030;Name=waaB;gbkey=Gene;gene=waaB;gene_biotype=protein_coding;gene_synonym=rfaB;locus_tag=C9E94_RS12030;old_locus_tag=C9E94_12300
NZ_PYJR01000091.1	Protein Homology	CDS	1790	2869	.	-	0	ID=cds-WP_000683975.1;Parent=gene-C9E94_RS12030;Dbxref=GenBank:WP_000683975.1;Name=WP_000683975.1;gbkey=CDS;gene=waaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462619.1;locus_tag=C9E94_RS12030;product=lipopolysaccharide 1%2C6-galactosyltransferase;protein_id=WP_000683975.1;transl_table=11
NZ_PYJR01000091.1	RefSeq	pseudogene	2987	3148	.	-	.	ID=gene-C9E94_RS12040;Name=C9E94_RS12040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS12040;old_locus_tag=C9E94_12310;partial=true;pseudo=true;start_range=.,2987
NZ_PYJR01000091.1	Protein Homology	CDS	2987	3148	.	-	0	ID=cds-C9E94_RS12040;Parent=gene-C9E94_RS12040;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280096.1;locus_tag=C9E94_RS12040;partial=true;product=glycosyltransferase family 8 protein;pseudo=true;start_range=.,2987;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	3204	4001	.	-	.	ID=gene-C9E94_RS12045;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=C9E94_RS12045;old_locus_tag=C9E94_12315
NZ_PYJR01000091.1	Protein Homology	CDS	3204	4001	.	-	0	ID=cds-WP_000229825.1;Parent=gene-C9E94_RS12045;Dbxref=GenBank:WP_000229825.1;Name=WP_000229825.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462621.1;locus_tag=C9E94_RS12045;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WP_000229825.1;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	3994	5118	.	-	.	ID=gene-C9E94_RS12050;Name=C9E94_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12050;old_locus_tag=C9E94_12320
NZ_PYJR01000091.1	Protein Homology	CDS	3994	5118	.	-	0	ID=cds-WP_001261577.1;Parent=gene-C9E94_RS12050;Dbxref=GenBank:WP_001261577.1;Name=WP_001261577.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462622.1;locus_tag=C9E94_RS12050;product=glycosyltransferase family 4 protein;protein_id=WP_001261577.1;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	5115	6185	.	-	.	ID=gene-C9E94_RS12055;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=C9E94_RS12055;old_locus_tag=C9E94_12325
NZ_PYJR01000091.1	Protein Homology	CDS	5115	6185	.	-	0	ID=cds-WP_001669304.1;Parent=gene-C9E94_RS12055;Dbxref=GenBank:WP_001669304.1;Name=WP_001669304.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521713.1;locus_tag=C9E94_RS12055;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WP_001669304.1;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	6594	7871	.	+	.	ID=gene-C9E94_RS12060;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=C9E94_RS12060;old_locus_tag=C9E94_12330
NZ_PYJR01000091.1	Protein Homology	CDS	6594	7871	.	+	0	ID=cds-WP_000891582.1;Parent=gene-C9E94_RS12060;Dbxref=GenBank:WP_000891582.1;Name=WP_000891582.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462624.1;locus_tag=C9E94_RS12060;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_000891582.1;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	7880	8359	.	+	.	ID=gene-C9E94_RS12065;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=C9E94_RS12065;old_locus_tag=C9E94_12335
NZ_PYJR01000091.1	Protein Homology	CDS	7880	8359	.	+	0	ID=cds-WP_001171884.1;Parent=gene-C9E94_RS12065;Dbxref=GenBank:WP_001171884.1;Name=WP_001171884.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462625.1;locus_tag=C9E94_RS12065;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001171884.1;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	8387	9196	.	-	.	ID=gene-C9E94_RS12070;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=C9E94_RS12070;old_locus_tag=C9E94_12340
NZ_PYJR01000091.1	Protein Homology	CDS	8387	9196	.	-	0	ID=cds-WP_001114508.1;Parent=gene-C9E94_RS12070;Dbxref=GenBank:WP_001114508.1;Name=WP_001114508.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462626.1;locus_tag=C9E94_RS12070;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_001114508.1;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	9294	9461	.	-	.	ID=gene-C9E94_RS12075;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=C9E94_RS12075;old_locus_tag=C9E94_12345
NZ_PYJR01000091.1	Protein Homology	CDS	9294	9461	.	-	0	ID=cds-WP_001051798.1;Parent=gene-C9E94_RS12075;Dbxref=GenBank:WP_001051798.1;Name=WP_001051798.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=C9E94_RS12075;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	9482	9718	.	-	.	ID=gene-C9E94_RS12080;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=C9E94_RS12080;old_locus_tag=C9E94_12350
NZ_PYJR01000091.1	Protein Homology	CDS	9482	9718	.	-	0	ID=cds-WP_001519051.1;Parent=gene-C9E94_RS12080;Dbxref=GenBank:WP_001519051.1;Name=WP_001519051.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=C9E94_RS12080;product=50S ribosomal protein L28;protein_id=WP_001519051.1;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	9936	10601	.	-	.	ID=gene-C9E94_RS12085;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=C9E94_RS12085;old_locus_tag=C9E94_12355
NZ_PYJR01000091.1	Protein Homology	CDS	9936	10601	.	-	0	ID=cds-WP_000380129.1;Parent=gene-C9E94_RS12085;Dbxref=GenBank:WP_000380129.1;Name=WP_000380129.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462629.1;locus_tag=C9E94_RS12085;product=RadC family protein;protein_id=WP_000380129.1;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	10777	11997	.	+	.	ID=gene-C9E94_RS12090;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=C9E94_RS12090;old_locus_tag=C9E94_12360
NZ_PYJR01000091.1	Protein Homology	CDS	10777	11997	.	+	0	ID=cds-WP_000050179.1;Parent=gene-C9E94_RS12090;Dbxref=GenBank:WP_000050179.1;Name=WP_000050179.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=C9E94_RS12090;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_000050179.1;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	11975	12433	.	+	.	ID=gene-C9E94_RS12095;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=C9E94_RS12095;old_locus_tag=C9E94_12365
NZ_PYJR01000091.1	Protein Homology	CDS	11975	12433	.	+	0	ID=cds-WP_000976078.1;Parent=gene-C9E94_RS12095;Dbxref=GenBank:WP_000976078.1;Name=WP_000976078.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=C9E94_RS12095;product=dUTP diphosphatase;protein_id=WP_000976078.1;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	12541	13137	.	+	.	ID=gene-C9E94_RS12100;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=C9E94_RS12100;old_locus_tag=C9E94_12370
NZ_PYJR01000091.1	Protein Homology	CDS	12541	13137	.	+	0	ID=cds-WP_000818607.1;Parent=gene-C9E94_RS12100;Dbxref=GenBank:WP_000818607.1;Name=WP_000818607.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=C9E94_RS12100;product=nucleoid occlusion factor SlmA;protein_id=WP_000818607.1;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	13215	13856	.	-	.	ID=gene-C9E94_RS12105;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=C9E94_RS12105;old_locus_tag=C9E94_12375
NZ_PYJR01000091.1	Protein Homology	CDS	13215	13856	.	-	0	ID=cds-WP_000806167.1;Parent=gene-C9E94_RS12105;Dbxref=GenBank:WP_000806167.1;Name=WP_000806167.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=C9E94_RS12105;product=orotate phosphoribosyltransferase;protein_id=WP_000806167.1;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	13935	14651	.	-	.	ID=gene-C9E94_RS12110;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=C9E94_RS12110;old_locus_tag=C9E94_12380
NZ_PYJR01000091.1	Protein Homology	CDS	13935	14651	.	-	0	ID=cds-WP_001247078.1;Parent=gene-C9E94_RS12110;Dbxref=GenBank:WP_001247078.1;Name=WP_001247078.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=C9E94_RS12110;product=ribonuclease PH;protein_id=WP_001247078.1;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	14777	15640	.	+	.	ID=gene-C9E94_RS12115;Name=C9E94_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12115;old_locus_tag=C9E94_12390
NZ_PYJR01000091.1	Protein Homology	CDS	14777	15640	.	+	0	ID=cds-WP_000621352.1;Parent=gene-C9E94_RS12115;Dbxref=GenBank:WP_000621352.1;Name=WP_000621352.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=C9E94_RS12115;product=YicC/YloC family endoribonuclease;protein_id=WP_000621352.1;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	15690	16592	.	-	.	ID=gene-C9E94_RS12120;Name=C9E94_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12120;old_locus_tag=C9E94_12395
NZ_PYJR01000091.1	Protein Homology	CDS	15690	16592	.	-	0	ID=cds-WP_001050859.1;Parent=gene-C9E94_RS12120;Dbxref=GenBank:WP_001050859.1;Name=WP_001050859.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462636.1;locus_tag=C9E94_RS12120;product=LysR family transcriptional regulator;protein_id=WP_001050859.1;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	16666	17547	.	+	.	ID=gene-C9E94_RS12125;Name=C9E94_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12125;old_locus_tag=C9E94_12400
NZ_PYJR01000091.1	Protein Homology	CDS	16666	17547	.	+	0	ID=cds-WP_001082966.1;Parent=gene-C9E94_RS12125;Dbxref=GenBank:WP_001082966.1;Name=WP_001082966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462637.1;locus_tag=C9E94_RS12125;product=HARLDQ motif MBL-fold protein;protein_id=WP_001082966.1;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	17798	18415	.	+	.	ID=gene-C9E94_RS12130;Name=C9E94_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12130;old_locus_tag=C9E94_12405
NZ_PYJR01000091.1	Protein Homology	CDS	17798	18415	.	+	0	ID=cds-WP_000924334.1;Parent=gene-C9E94_RS12130;Dbxref=GenBank:WP_000924334.1;Name=WP_000924334.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462638.1;locus_tag=C9E94_RS12130;product=trimeric intracellular cation channel family protein;protein_id=WP_000924334.1;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	18412	20097	.	-	.	ID=gene-C9E94_RS12135;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=C9E94_RS12135;old_locus_tag=C9E94_12410
NZ_PYJR01000091.1	Protein Homology	CDS	18412	20097	.	-	0	ID=cds-WP_080203801.1;Parent=gene-C9E94_RS12135;Dbxref=GenBank:WP_080203801.1;Name=WP_080203801.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=C9E94_RS12135;product=NAD-dependent DNA ligase LigB;protein_id=WP_080203801.1;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	20354	20977	.	+	.	ID=gene-C9E94_RS12140;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=C9E94_RS12140;old_locus_tag=C9E94_12415
NZ_PYJR01000091.1	Protein Homology	CDS	20354	20977	.	+	0	ID=cds-WP_000046966.1;Parent=gene-C9E94_RS12140;Dbxref=GenBank:WP_000046966.1;Name=WP_000046966.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=C9E94_RS12140;product=guanylate kinase;protein_id=WP_000046966.1;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	21032	21307	.	+	.	ID=gene-C9E94_RS12145;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=C9E94_RS12145;old_locus_tag=C9E94_12420
NZ_PYJR01000091.1	Protein Homology	CDS	21032	21307	.	+	0	ID=cds-WP_000135058.1;Parent=gene-C9E94_RS12145;Dbxref=GenBank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=C9E94_RS12145;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	21326	23437	.	+	.	ID=gene-C9E94_RS12150;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=C9E94_RS12150;old_locus_tag=C9E94_12425
NZ_PYJR01000091.1	Protein Homology	CDS	21326	23437	.	+	0	ID=cds-WP_000280481.1;Parent=gene-C9E94_RS12150;Dbxref=GenBank:WP_000280481.1;Name=WP_000280481.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=C9E94_RS12150;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_000280481.1;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	23442	24131	.	+	.	ID=gene-C9E94_RS12155;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=C9E94_RS12155;old_locus_tag=C9E94_12430
NZ_PYJR01000091.1	Protein Homology	CDS	23442	24131	.	+	0	ID=cds-WP_001068436.1;Parent=gene-C9E94_RS12155;Dbxref=GenBank:WP_001068436.1;Name=WP_001068436.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462643.1;locus_tag=C9E94_RS12155;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_001068436.1;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	24137	26218	.	+	.	ID=gene-C9E94_RS12160;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=C9E94_RS12160;old_locus_tag=C9E94_12435
NZ_PYJR01000091.1	Protein Homology	CDS	24137	26218	.	+	0	ID=cds-WP_000016747.1;Parent=gene-C9E94_RS12160;Dbxref=GenBank:WP_000016747.1;Name=WP_000016747.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462644.1;locus_tag=C9E94_RS12160;product=ATP-dependent DNA helicase RecG;protein_id=WP_000016747.1;transl_table=11
NZ_PYJR01000091.1	RefSeq	gene	26254	27459	.	-	.	ID=gene-C9E94_RS12165;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=C9E94_RS12165;old_locus_tag=C9E94_12440
NZ_PYJR01000091.1	Protein Homology	CDS	26254	27459	.	-	0	ID=cds-WP_000462250.1;Parent=gene-C9E94_RS12165;Dbxref=GenBank:WP_000462250.1;Name=WP_000462250.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507315.1;locus_tag=C9E94_RS12165;product=sodium/glutamate symporter;protein_id=WP_000462250.1;transl_table=11
##sequence-region NZ_PYJR01000113.1 1 26361
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000113.1	RefSeq	region	1	26361	.	+	.	ID=NZ_PYJR01000113.1:1..26361;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000113.1	RefSeq	gene	51	944	.	+	.	ID=gene-C9E94_RS17065;Name=C9E94_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17065;old_locus_tag=C9E94_17470
NZ_PYJR01000113.1	Protein Homology	CDS	51	944	.	+	0	ID=cds-WP_000819375.1;Parent=gene-C9E94_RS17065;Dbxref=GenBank:WP_000819375.1;Name=WP_000819375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461968.1;locus_tag=C9E94_RS17065;product=transporter;protein_id=WP_000819375.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	992	2425	.	-	.	ID=gene-C9E94_RS17070;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=C9E94_RS17070;old_locus_tag=C9E94_17475
NZ_PYJR01000113.1	Protein Homology	CDS	992	2425	.	-	0	ID=cds-WP_001230141.1;Parent=gene-C9E94_RS17070;Dbxref=GenBank:WP_001230141.1;Name=WP_001230141.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461967.1;locus_tag=C9E94_RS17070;product=6-phospho-beta-glucosidase BglA;protein_id=WP_001230141.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	2584	2895	.	+	.	ID=gene-C9E94_RS17075;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=C9E94_RS17075;old_locus_tag=C9E94_17480
NZ_PYJR01000113.1	Protein Homology	CDS	2584	2895	.	+	0	ID=cds-WP_001182976.1;Parent=gene-C9E94_RS17075;Dbxref=GenBank:WP_001182976.1;Name=WP_001182976.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461966.1;locus_tag=C9E94_RS17075;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_001182976.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	3059	3718	.	+	.	ID=gene-C9E94_RS17080;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=C9E94_RS17080;old_locus_tag=C9E94_17485
NZ_PYJR01000113.1	Protein Homology	CDS	3059	3718	.	+	0	ID=cds-WP_000250289.1;Parent=gene-C9E94_RS17080;Dbxref=GenBank:WP_000250289.1;Name=WP_000250289.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461965.1;locus_tag=C9E94_RS17080;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_000250289.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	3834	4814	.	-	.	ID=gene-C9E94_RS17090;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=C9E94_RS17090;old_locus_tag=C9E94_17495
NZ_PYJR01000113.1	Protein Homology	CDS	3834	4814	.	-	0	ID=cds-WP_000874175.1;Parent=gene-C9E94_RS17090;Dbxref=GenBank:WP_000874175.1;Name=WP_000874175.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461964.1;locus_tag=C9E94_RS17090;product=tRNA-modifying protein YgfZ;protein_id=WP_000874175.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	5064	5330	.	+	.	ID=gene-C9E94_RS17095;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=C9E94_RS17095;old_locus_tag=C9E94_17505
NZ_PYJR01000113.1	Protein Homology	CDS	5064	5330	.	+	0	ID=cds-WP_000351186.1;Parent=gene-C9E94_RS17095;Dbxref=GenBank:WP_000351186.1;Name=WP_000351186.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=C9E94_RS17095;product=FAD assembly factor SdhE;protein_id=WP_000351186.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	5311	5724	.	+	.	ID=gene-C9E94_RS17100;Name=C9E94_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17100;old_locus_tag=C9E94_17510
NZ_PYJR01000113.1	Protein Homology	CDS	5311	5724	.	+	0	ID=cds-WP_000244756.1;Parent=gene-C9E94_RS17100;Dbxref=GenBank:WP_000244756.1;Name=WP_000244756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461962.1;locus_tag=C9E94_RS17100;product=protein YgfX;protein_id=WP_000244756.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	5777	6298	.	-	.	ID=gene-C9E94_RS17105;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=C9E94_RS17105;old_locus_tag=C9E94_17515
NZ_PYJR01000113.1	Protein Homology	CDS	5777	6298	.	-	0	ID=cds-WP_080169921.1;Parent=gene-C9E94_RS17105;Dbxref=GenBank:WP_080169921.1;Name=WP_080169921.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461961.1;locus_tag=C9E94_RS17105;product=flavodoxin FldB;protein_id=WP_080169921.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	6411	7307	.	+	.	ID=gene-C9E94_RS17110;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=C9E94_RS17110;old_locus_tag=C9E94_17520
NZ_PYJR01000113.1	Protein Homology	CDS	6411	7307	.	+	0	ID=cds-WP_000434302.1;Parent=gene-C9E94_RS17110;Dbxref=GenBank:WP_000434302.1;Name=WP_000434302.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461960.1;locus_tag=C9E94_RS17110;product=site-specific tyrosine recombinase XerD;protein_id=WP_000434302.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	7331	8044	.	+	.	ID=gene-C9E94_RS17115;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=C9E94_RS17115;old_locus_tag=C9E94_17525
NZ_PYJR01000113.1	Protein Homology	CDS	7331	8044	.	+	0	ID=cds-WP_000745614.1;Parent=gene-C9E94_RS17115;Dbxref=GenBank:WP_000745614.1;Name=WP_000745614.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461959.1;locus_tag=C9E94_RS17115;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_000745614.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	8050	9783	.	+	.	ID=gene-C9E94_RS17120;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=C9E94_RS17120;old_locus_tag=C9E94_17530
NZ_PYJR01000113.1	Protein Homology	CDS	8050	9783	.	+	0	ID=cds-WP_000813394.1;Parent=gene-C9E94_RS17120;Dbxref=GenBank:WP_000813394.1;Name=WP_000813394.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461958.1;locus_tag=C9E94_RS17120;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_000813394.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	9888	10986	.	+	.	ID=gene-C9E94_RS17125;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=C9E94_RS17125;old_locus_tag=C9E94_17535
NZ_PYJR01000113.1	Protein Homology	CDS	9888	9962	.	+	0	ID=cds-WP_010989230.1;Parent=gene-C9E94_RS17125;Dbxref=GenBank:WP_010989230.1;Name=WP_010989230.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=C9E94_RS17125;product=peptide chain release factor 2;protein_id=WP_010989230.1;transl_table=11
NZ_PYJR01000113.1	Protein Homology	CDS	9964	10986	.	+	0	ID=cds-WP_010989230.1;Parent=gene-C9E94_RS17125;Dbxref=GenBank:WP_010989230.1;Name=WP_010989230.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=C9E94_RS17125;product=peptide chain release factor 2;protein_id=WP_010989230.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	10996	12513	.	+	.	ID=gene-C9E94_RS17130;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=C9E94_RS17130;old_locus_tag=C9E94_17540
NZ_PYJR01000113.1	Protein Homology	CDS	10996	12513	.	+	0	ID=cds-WP_000003339.1;Parent=gene-C9E94_RS17130;Dbxref=GenBank:WP_000003339.1;Name=WP_000003339.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=C9E94_RS17130;product=lysine--tRNA ligase;protein_id=WP_000003339.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	12589	13134	.	-	.	ID=gene-C9E94_RS17135;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=C9E94_RS17135;old_locus_tag=C9E94_17545
NZ_PYJR01000113.1	Protein Homology	CDS	12589	13134	.	-	0	ID=cds-WP_080203007.1;Parent=gene-C9E94_RS17135;Dbxref=GenBank:WP_080203007.1;Name=WP_080203007.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461955.1;locus_tag=C9E94_RS17135;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_080203007.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	13399	14157	.	+	.	ID=gene-C9E94_RS17140;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=C9E94_RS17140;old_locus_tag=C9E94_17555
NZ_PYJR01000113.1	Protein Homology	CDS	13399	14157	.	+	0	ID=cds-WP_000244328.1;Parent=gene-C9E94_RS17140;Dbxref=GenBank:WP_000244328.1;Name=WP_000244328.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461954.1;locus_tag=C9E94_RS17140;product=amidase activator ActS;protein_id=WP_000244328.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	14237	14310	.	+	.	ID=gene-C9E94_RS17145;Name=C9E94_RS17145;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS17145;old_locus_tag=C9E94_17560
NZ_PYJR01000113.1	tRNAscan-SE	tRNA	14237	14310	.	+	.	ID=rna-C9E94_RS17145;Parent=gene-C9E94_RS17145;anticodon=(pos:14269..14271);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS17145;product=tRNA-Gly
NZ_PYJR01000113.1	tRNAscan-SE	exon	14237	14310	.	+	.	ID=exon-C9E94_RS17145-1;Parent=rna-C9E94_RS17145;anticodon=(pos:14269..14271);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS17145;product=tRNA-Gly
NZ_PYJR01000113.1	RefSeq	gene	14475	15578	.	+	.	ID=gene-C9E94_RS17150;Name=C9E94_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17150;old_locus_tag=C9E94_17565
NZ_PYJR01000113.1	Protein Homology	CDS	14475	15578	.	+	0	ID=cds-WP_023993954.1;Parent=gene-C9E94_RS17150;Dbxref=GenBank:WP_023993954.1;Name=WP_023993954.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192954.1;locus_tag=C9E94_RS17150;product=tyrosine-type recombinase/integrase;protein_id=WP_023993954.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	15733	16083	.	+	.	ID=gene-C9E94_RS17155;Name=arsR;gbkey=Gene;gene=arsR;gene_biotype=protein_coding;locus_tag=C9E94_RS17155;old_locus_tag=C9E94_17570
NZ_PYJR01000113.1	Protein Homology	CDS	15733	16083	.	+	0	ID=cds-WP_023993955.1;Parent=gene-C9E94_RS17155;Dbxref=GenBank:WP_023993955.1;Name=WP_023993955.1;gbkey=CDS;gene=arsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206664.1;locus_tag=C9E94_RS17155;product=As(III)-sensing metalloregulatory transcriptional repressor ArsR;protein_id=WP_023993955.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	pseudogene	16163	16336	.	+	.	ID=gene-C9E94_RS17160;Name=C9E94_RS17160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS17160;old_locus_tag=C9E94_17575;partial=true;pseudo=true;start_range=.,16163
NZ_PYJR01000113.1	Protein Homology	CDS	16163	16336	.	+	0	ID=cds-C9E94_RS17160;Parent=gene-C9E94_RS17160;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312402.1;locus_tag=C9E94_RS17160;partial=true;product=arsenate reductase;pseudo=true;start_range=.,16163;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	16550	17515	.	+	.	ID=gene-C9E94_RS17165;Name=C9E94_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17165;old_locus_tag=C9E94_17580
NZ_PYJR01000113.1	Protein Homology	CDS	16550	17515	.	+	0	ID=cds-WP_001123709.1;Parent=gene-C9E94_RS17165;Dbxref=GenBank:WP_001123709.1;Name=WP_001123709.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524950.1;locus_tag=C9E94_RS17165;product=sugar-binding transcriptional regulator;protein_id=WP_001123709.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	17689	18147	.	-	.	ID=gene-C9E94_RS17170;Name=C9E94_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17170;old_locus_tag=C9E94_17585
NZ_PYJR01000113.1	Protein Homology	CDS	17689	18147	.	-	0	ID=cds-WP_001683480.1;Parent=gene-C9E94_RS17170;Dbxref=GenBank:WP_001683480.1;Name=WP_001683480.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001683480.1;locus_tag=C9E94_RS17170;product=PTS sugar transporter subunit IIA;protein_id=WP_001683480.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	18155	18439	.	-	.	ID=gene-C9E94_RS17175;Name=C9E94_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17175;old_locus_tag=C9E94_17590
NZ_PYJR01000113.1	Protein Homology	CDS	18155	18439	.	-	0	ID=cds-WP_000723161.1;Parent=gene-C9E94_RS17175;Dbxref=GenBank:WP_000723161.1;Name=WP_000723161.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172369.1;locus_tag=C9E94_RS17175;product=PTS sugar transporter subunit IIB;protein_id=WP_000723161.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	18461	19831	.	-	.	ID=gene-C9E94_RS17180;Name=C9E94_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17180;old_locus_tag=C9E94_17595
NZ_PYJR01000113.1	Protein Homology	CDS	18461	19831	.	-	0	ID=cds-WP_023993958.1;Parent=gene-C9E94_RS17180;Dbxref=GenBank:WP_023993958.1;Name=WP_023993958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015964568.1;locus_tag=C9E94_RS17180;product=PTS galactitol transporter subunit IIC;protein_id=WP_023993958.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	19835	20371	.	-	.	ID=gene-C9E94_RS17185;Name=C9E94_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17185;old_locus_tag=C9E94_17600
NZ_PYJR01000113.1	Protein Homology	CDS	19835	20371	.	-	0	ID=cds-WP_000850102.1;Parent=gene-C9E94_RS17185;Dbxref=GenBank:WP_000850102.1;Name=WP_000850102.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000850105.1;locus_tag=C9E94_RS17185;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_000850102.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	20753	21508	.	+	.	ID=gene-C9E94_RS17190;Name=C9E94_RS17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17190;old_locus_tag=C9E94_17605
NZ_PYJR01000113.1	Protein Homology	CDS	20753	21508	.	+	0	ID=cds-WP_094889083.1;Parent=gene-C9E94_RS17190;Dbxref=GenBank:WP_094889083.1;Name=WP_094889083.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000281586.1;locus_tag=C9E94_RS17190;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_094889083.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	21827	22306	.	+	.	ID=gene-C9E94_RS17195;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=C9E94_RS17195;old_locus_tag=C9E94_17610
NZ_PYJR01000113.1	Protein Homology	CDS	21827	22306	.	+	0	ID=cds-WP_177952181.1;Parent=gene-C9E94_RS17195;Dbxref=GenBank:WP_177952181.1;Name=WP_177952181.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012512955.1;locus_tag=C9E94_RS17195;product=PTS galactitol transporter subunit IIA;protein_id=WP_177952181.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	22328	22621	.	+	.	ID=gene-C9E94_RS17200;Name=C9E94_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17200;old_locus_tag=C9E94_17615
NZ_PYJR01000113.1	Protein Homology	CDS	22328	22621	.	+	0	ID=cds-WP_000628511.1;Parent=gene-C9E94_RS17200;Dbxref=GenBank:WP_000628511.1;Name=WP_000628511.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004105500.1;locus_tag=C9E94_RS17200;product=PTS sugar transporter subunit IIB;protein_id=WP_000628511.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	22649	23902	.	+	.	ID=gene-C9E94_RS17205;Name=C9E94_RS17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17205;old_locus_tag=C9E94_17620
NZ_PYJR01000113.1	Protein Homology	CDS	22649	23902	.	+	0	ID=cds-WP_000425557.1;Parent=gene-C9E94_RS17205;Dbxref=GenBank:WP_000425557.1;Name=WP_000425557.1;Ontology_term=GO:0009401,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000425551.1;locus_tag=C9E94_RS17205;product=PTS transporter subunit IIC;protein_id=WP_000425557.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	23921	24565	.	+	.	ID=gene-C9E94_RS17210;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=C9E94_RS17210;old_locus_tag=C9E94_17625
NZ_PYJR01000113.1	Protein Homology	CDS	23921	24565	.	+	0	ID=cds-WP_135401143.1;Parent=gene-C9E94_RS17210;Dbxref=GenBank:WP_135401143.1;Name=WP_135401143.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001062775.1;locus_tag=C9E94_RS17210;product=ribulose-phosphate 3-epimerase;protein_id=WP_135401143.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	24688	25440	.	+	.	ID=gene-C9E94_RS17215;Name=C9E94_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17215;old_locus_tag=C9E94_17630
NZ_PYJR01000113.1	Protein Homology	CDS	24688	25440	.	+	0	ID=cds-WP_135401144.1;Parent=gene-C9E94_RS17215;Dbxref=GenBank:WP_135401144.1;Name=WP_135401144.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000064391.1;locus_tag=C9E94_RS17215;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_135401144.1;transl_table=11
NZ_PYJR01000113.1	RefSeq	gene	25455	26015	.	+	.	ID=gene-C9E94_RS17220;Name=hxlB;gbkey=Gene;gene=hxlB;gene_biotype=protein_coding;locus_tag=C9E94_RS17220;old_locus_tag=C9E94_17635
NZ_PYJR01000113.1	Protein Homology	CDS	25455	26015	.	+	0	ID=cds-WP_000116120.1;Parent=gene-C9E94_RS17220;Dbxref=GenBank:WP_000116120.1;Name=WP_000116120.1;Ontology_term=GO:1901135,GO:0016853,GO:0043800;gbkey=CDS;gene=hxlB;go_function=isomerase activity|0016853||IEA,6-phospho-3-hexuloisomerase activity|0043800||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000116013.1;locus_tag=C9E94_RS17220;product=6-phospho-3-hexuloisomerase;protein_id=WP_000116120.1;transl_table=11
##sequence-region NZ_PYJR01000128.1 1 26183
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000128.1	RefSeq	region	1	26183	.	+	.	ID=NZ_PYJR01000128.1:1..26183;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000128.1	RefSeq	gene	227	781	.	+	.	ID=gene-C9E94_RS19230;Name=C9E94_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19230;old_locus_tag=C9E94_19710
NZ_PYJR01000128.1	Protein Homology	CDS	227	781	.	+	0	ID=cds-WP_001285640.1;Parent=gene-C9E94_RS19230;Dbxref=GenBank:WP_001285640.1;Name=WP_001285640.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462303.1;locus_tag=C9E94_RS19230;product=gamma carbonic anhydrase family protein;protein_id=WP_001285640.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	757	1014	.	-	.	ID=gene-C9E94_RS19235;Name=C9E94_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19235;old_locus_tag=C9E94_19715
NZ_PYJR01000128.1	Protein Homology	CDS	757	1014	.	-	0	ID=cds-WP_001070571.1;Parent=gene-C9E94_RS19235;Dbxref=GenBank:WP_001070571.1;Name=WP_001070571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462304.1;locus_tag=C9E94_RS19235;product=DUF1488 domain-containing protein;protein_id=WP_001070571.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	1011	1829	.	-	.	ID=gene-C9E94_RS19240;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=C9E94_RS19240;old_locus_tag=C9E94_19720
NZ_PYJR01000128.1	Protein Homology	CDS	1011	1829	.	-	0	ID=cds-WP_000451202.1;Parent=gene-C9E94_RS19240;Dbxref=GenBank:WP_000451202.1;Name=WP_000451202.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462305.1;locus_tag=C9E94_RS19240;product=shikimate dehydrogenase;protein_id=WP_000451202.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	1834	2406	.	-	.	ID=gene-C9E94_RS19245;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=C9E94_RS19245;old_locus_tag=C9E94_19725
NZ_PYJR01000128.1	Protein Homology	CDS	1834	2406	.	-	0	ID=cds-WP_001063613.1;Parent=gene-C9E94_RS19245;Dbxref=GenBank:WP_001063613.1;Name=WP_001063613.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462306.1;locus_tag=C9E94_RS19245;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_001063613.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	2411	2953	.	-	.	ID=gene-C9E94_RS19250;Name=C9E94_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19250;old_locus_tag=C9E94_19730
NZ_PYJR01000128.1	Protein Homology	CDS	2411	2953	.	-	0	ID=cds-WP_001129708.1;Parent=gene-C9E94_RS19250;Dbxref=GenBank:WP_001129708.1;Name=WP_001129708.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462307.1;locus_tag=C9E94_RS19250;product=DNA topoisomerase family protein;protein_id=WP_001129708.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	2980	3453	.	-	.	ID=gene-C9E94_RS19255;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=C9E94_RS19255;old_locus_tag=C9E94_19735
NZ_PYJR01000128.1	Protein Homology	CDS	2980	3453	.	-	0	ID=cds-WP_000460663.1;Parent=gene-C9E94_RS19255;Dbxref=GenBank:WP_000460663.1;Name=WP_000460663.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=C9E94_RS19255;product=DUF494 family protein Smg;protein_id=WP_000460663.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	3425	4549	.	-	.	ID=gene-C9E94_RS19260;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=C9E94_RS19260;old_locus_tag=C9E94_19740
NZ_PYJR01000128.1	Protein Homology	CDS	3425	4549	.	-	0	ID=cds-WP_000124526.1;Parent=gene-C9E94_RS19260;Dbxref=GenBank:WP_000124526.1;Name=WP_000124526.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462309.1;locus_tag=C9E94_RS19260;product=DNA-protecting protein DprA;protein_id=WP_000124526.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	4681	5190	.	+	.	ID=gene-C9E94_RS19265;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=C9E94_RS19265;old_locus_tag=C9E94_19745
NZ_PYJR01000128.1	Protein Homology	CDS	4681	5190	.	+	0	ID=cds-WP_000114987.1;Parent=gene-C9E94_RS19265;Dbxref=GenBank:WP_000114987.1;Name=WP_000114987.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462310.1;locus_tag=C9E94_RS19265;product=peptide deformylase;protein_id=WP_000114987.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	5206	6153	.	+	.	ID=gene-C9E94_RS19270;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=C9E94_RS19270;old_locus_tag=C9E94_19750
NZ_PYJR01000128.1	Protein Homology	CDS	5206	6153	.	+	0	ID=cds-WP_001285165.1;Parent=gene-C9E94_RS19270;Dbxref=GenBank:WP_001285165.1;Name=WP_001285165.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462311.1;locus_tag=C9E94_RS19270;product=methionyl-tRNA formyltransferase;protein_id=WP_001285165.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	6205	7494	.	+	.	ID=gene-C9E94_RS19275;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=C9E94_RS19275;old_locus_tag=C9E94_19755
NZ_PYJR01000128.1	Protein Homology	CDS	6205	7494	.	+	0	ID=cds-WP_000744608.1;Parent=gene-C9E94_RS19275;Dbxref=GenBank:WP_000744608.1;Name=WP_000744608.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462312.1;locus_tag=C9E94_RS19275;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_000744608.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	7516	8892	.	+	.	ID=gene-C9E94_RS19280;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=C9E94_RS19280;old_locus_tag=C9E94_19760
NZ_PYJR01000128.1	Protein Homology	CDS	7516	8892	.	+	0	ID=cds-WP_000691374.1;Parent=gene-C9E94_RS19280;Dbxref=GenBank:WP_000691374.1;Name=WP_000691374.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=C9E94_RS19280;product=Trk system potassium transporter TrkA;protein_id=WP_000691374.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	9034	9447	.	+	.	ID=gene-C9E94_RS19285;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=C9E94_RS19285;old_locus_tag=C9E94_19765
NZ_PYJR01000128.1	Protein Homology	CDS	9034	9447	.	+	0	ID=cds-WP_000008119.1;Parent=gene-C9E94_RS19285;Dbxref=GenBank:WP_000008119.1;Name=WP_000008119.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462314.1;locus_tag=C9E94_RS19285;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_000008119.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	pseudogene	9449	9652	.	-	.	ID=gene-C9E94_RS19290;Name=C9E94_RS19290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS19290;old_locus_tag=C9E94_19770;partial=true;pseudo=true;start_range=.,9449
NZ_PYJR01000128.1	Protein Homology	CDS	9449	9652	.	-	0	ID=cds-C9E94_RS19290;Parent=gene-C9E94_RS19290;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588467.1;locus_tag=C9E94_RS19290;partial=true;product=alternative ribosome-rescue factor A;pseudo=true;start_range=.,9449;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	9710	10135	.	-	.	ID=gene-C9E94_RS19295;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=C9E94_RS19295;old_locus_tag=C9E94_19775
NZ_PYJR01000128.1	Protein Homology	CDS	9710	10135	.	-	0	ID=cds-WP_023254966.1;Parent=gene-C9E94_RS19295;Dbxref=GenBank:WP_023254966.1;Name=WP_023254966.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462316.1;locus_tag=C9E94_RS19295;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_023254966.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	10146	10514	.	-	.	ID=gene-C9E94_RS19300;Name=C9E94_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19300;old_locus_tag=C9E94_19780
NZ_PYJR01000128.1	Protein Homology	CDS	10146	10514	.	-	0	ID=cds-WP_000266515.1;Parent=gene-C9E94_RS19300;Dbxref=GenBank:WP_000266515.1;Name=WP_000266515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462317.1;locus_tag=C9E94_RS19300;product=DUF1992 domain-containing protein;protein_id=WP_000266515.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	10622	11005	.	-	.	ID=gene-C9E94_RS19305;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=C9E94_RS19305;old_locus_tag=C9E94_19785
NZ_PYJR01000128.1	Protein Homology	CDS	10622	11005	.	-	0	ID=cds-WP_001216370.1;Parent=gene-C9E94_RS19305;Dbxref=GenBank:WP_001216370.1;Name=WP_001216370.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462318.1;locus_tag=C9E94_RS19305;product=50S ribosomal protein L17;protein_id=WP_001216370.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	11046	12035	.	-	.	ID=gene-C9E94_RS19310;Name=C9E94_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19310;old_locus_tag=C9E94_19790
NZ_PYJR01000128.1	Protein Homology	CDS	11046	12035	.	-	0	ID=cds-WP_001162094.1;Parent=gene-C9E94_RS19310;Dbxref=GenBank:WP_001162094.1;Name=WP_001162094.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=C9E94_RS19310;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	12061	12681	.	-	.	ID=gene-C9E94_RS19315;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=C9E94_RS19315;old_locus_tag=C9E94_19795
NZ_PYJR01000128.1	Protein Homology	CDS	12061	12681	.	-	0	ID=cds-WP_000135226.1;Parent=gene-C9E94_RS19315;Dbxref=GenBank:WP_000135226.1;Name=WP_000135226.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=C9E94_RS19315;product=30S ribosomal protein S4;protein_id=WP_000135226.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	12715	13104	.	-	.	ID=gene-C9E94_RS19320;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=C9E94_RS19320;old_locus_tag=C9E94_19800
NZ_PYJR01000128.1	Protein Homology	CDS	12715	13104	.	-	0	ID=cds-WP_001029758.1;Parent=gene-C9E94_RS19320;Dbxref=GenBank:WP_001029758.1;Name=WP_001029758.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=C9E94_RS19320;product=30S ribosomal protein S11;protein_id=WP_001029758.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	13121	13477	.	-	.	ID=gene-C9E94_RS19325;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=C9E94_RS19325;old_locus_tag=C9E94_19805
NZ_PYJR01000128.1	Protein Homology	CDS	13121	13477	.	-	0	ID=cds-WP_000090780.1;Parent=gene-C9E94_RS19325;Dbxref=GenBank:WP_000090780.1;Name=WP_000090780.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=C9E94_RS19325;product=30S ribosomal protein S13;protein_id=WP_000090780.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	13624	13740	.	-	.	ID=gene-C9E94_RS19330;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=C9E94_RS19330;old_locus_tag=C9E94_19810
NZ_PYJR01000128.1	Protein Homology	CDS	13624	13740	.	-	0	ID=cds-WP_000868187.1;Parent=gene-C9E94_RS19330;Dbxref=GenBank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=C9E94_RS19330;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	13772	15103	.	-	.	ID=gene-C9E94_RS19335;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=C9E94_RS19335;old_locus_tag=C9E94_19815
NZ_PYJR01000128.1	Protein Homology	CDS	13772	15103	.	-	0	ID=cds-WP_001118864.1;Parent=gene-C9E94_RS19335;Dbxref=GenBank:WP_001118864.1;Name=WP_001118864.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=C9E94_RS19335;product=preprotein translocase subunit SecY;protein_id=WP_001118864.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	15111	15545	.	-	.	ID=gene-C9E94_RS19340;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=C9E94_RS19340;old_locus_tag=C9E94_19820
NZ_PYJR01000128.1	Protein Homology	CDS	15111	15545	.	-	0	ID=cds-WP_001238917.1;Parent=gene-C9E94_RS19340;Dbxref=GenBank:WP_001238917.1;Name=WP_001238917.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=C9E94_RS19340;product=50S ribosomal protein L15;protein_id=WP_001238917.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	15549	15728	.	-	.	ID=gene-C9E94_RS19345;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=C9E94_RS19345;old_locus_tag=C9E94_19825
NZ_PYJR01000128.1	Protein Homology	CDS	15549	15728	.	-	0	ID=cds-WP_001140434.1;Parent=gene-C9E94_RS19345;Dbxref=GenBank:WP_001140434.1;Name=WP_001140434.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=C9E94_RS19345;product=50S ribosomal protein L30;protein_id=WP_001140434.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	15732	16235	.	-	.	ID=gene-C9E94_RS19350;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=C9E94_RS19350;old_locus_tag=C9E94_19830
NZ_PYJR01000128.1	Protein Homology	CDS	15732	16235	.	-	0	ID=cds-WP_000940121.1;Parent=gene-C9E94_RS19350;Dbxref=GenBank:WP_000940121.1;Name=WP_000940121.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=C9E94_RS19350;product=30S ribosomal protein S5;protein_id=WP_000940121.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	16250	16603	.	-	.	ID=gene-C9E94_RS19355;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=C9E94_RS19355;old_locus_tag=C9E94_19835
NZ_PYJR01000128.1	Protein Homology	CDS	16250	16603	.	-	0	ID=cds-WP_000358956.1;Parent=gene-C9E94_RS19355;Dbxref=GenBank:WP_000358956.1;Name=WP_000358956.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=C9E94_RS19355;product=50S ribosomal protein L18;protein_id=WP_000358956.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	16613	17146	.	-	.	ID=gene-C9E94_RS19360;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=C9E94_RS19360;old_locus_tag=C9E94_19840
NZ_PYJR01000128.1	Protein Homology	CDS	16613	17146	.	-	0	ID=cds-WP_000091939.1;Parent=gene-C9E94_RS19360;Dbxref=GenBank:WP_000091939.1;Name=WP_000091939.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=C9E94_RS19360;product=50S ribosomal protein L6;protein_id=WP_000091939.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	17159	17551	.	-	.	ID=gene-C9E94_RS19365;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=C9E94_RS19365;old_locus_tag=C9E94_19845
NZ_PYJR01000128.1	Protein Homology	CDS	17159	17551	.	-	0	ID=cds-WP_000062611.1;Parent=gene-C9E94_RS19365;Dbxref=GenBank:WP_000062611.1;Name=WP_000062611.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=C9E94_RS19365;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	17585	17890	.	-	.	ID=gene-C9E94_RS19370;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=C9E94_RS19370;old_locus_tag=C9E94_19850
NZ_PYJR01000128.1	Protein Homology	CDS	17585	17890	.	-	0	ID=cds-WP_001118932.1;Parent=gene-C9E94_RS19370;Dbxref=GenBank:WP_001118932.1;Name=WP_001118932.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=C9E94_RS19370;product=30S ribosomal protein S14;protein_id=WP_001118932.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	17905	18444	.	-	.	ID=gene-C9E94_RS19375;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=C9E94_RS19375;old_locus_tag=C9E94_19855
NZ_PYJR01000128.1	Protein Homology	CDS	17905	18444	.	-	0	ID=cds-WP_001096206.1;Parent=gene-C9E94_RS19375;Dbxref=GenBank:WP_001096206.1;Name=WP_001096206.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=C9E94_RS19375;product=50S ribosomal protein L5;protein_id=WP_001096206.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	18459	18773	.	-	.	ID=gene-C9E94_RS19380;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=C9E94_RS19380;old_locus_tag=C9E94_19860
NZ_PYJR01000128.1	Protein Homology	CDS	18459	18773	.	-	0	ID=cds-WP_000729185.1;Parent=gene-C9E94_RS19380;Dbxref=GenBank:WP_000729185.1;Name=WP_000729185.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=C9E94_RS19380;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	18784	19155	.	-	.	ID=gene-C9E94_RS19385;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=C9E94_RS19385;old_locus_tag=C9E94_19865
NZ_PYJR01000128.1	Protein Homology	CDS	18784	19155	.	-	0	ID=cds-WP_000613954.1;Parent=gene-C9E94_RS19385;Dbxref=GenBank:WP_000613954.1;Name=WP_000613954.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=C9E94_RS19385;product=50S ribosomal protein L14;protein_id=WP_000613954.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	19319	19573	.	-	.	ID=gene-C9E94_RS19390;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=C9E94_RS19390;old_locus_tag=C9E94_19870
NZ_PYJR01000128.1	Protein Homology	CDS	19319	19573	.	-	0	ID=cds-WP_000130101.1;Parent=gene-C9E94_RS19390;Dbxref=GenBank:WP_000130101.1;Name=WP_000130101.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=C9E94_RS19390;product=30S ribosomal protein S17;protein_id=WP_000130101.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	19573	19764	.	-	.	ID=gene-C9E94_RS19395;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=C9E94_RS19395;old_locus_tag=C9E94_19875
NZ_PYJR01000128.1	Protein Homology	CDS	19573	19764	.	-	0	ID=cds-WP_000644742.1;Parent=gene-C9E94_RS19395;Dbxref=GenBank:WP_000644742.1;Name=WP_000644742.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=C9E94_RS19395;product=50S ribosomal protein L29;protein_id=WP_000644742.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	19764	20174	.	-	.	ID=gene-C9E94_RS19400;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=C9E94_RS19400;old_locus_tag=C9E94_19880
NZ_PYJR01000128.1	Protein Homology	CDS	19764	20174	.	-	0	ID=cds-WP_000941208.1;Parent=gene-C9E94_RS19400;Dbxref=GenBank:WP_000941208.1;Name=WP_000941208.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=C9E94_RS19400;product=50S ribosomal protein L16;protein_id=WP_000941208.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	20187	20888	.	-	.	ID=gene-C9E94_RS19405;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=C9E94_RS19405;old_locus_tag=C9E94_19885
NZ_PYJR01000128.1	Protein Homology	CDS	20187	20888	.	-	0	ID=cds-WP_000529945.1;Parent=gene-C9E94_RS19405;Dbxref=GenBank:WP_000529945.1;Name=WP_000529945.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=C9E94_RS19405;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	20906	21238	.	-	.	ID=gene-C9E94_RS19410;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=C9E94_RS19410;old_locus_tag=C9E94_19890
NZ_PYJR01000128.1	Protein Homology	CDS	20906	21238	.	-	0	ID=cds-WP_000447529.1;Parent=gene-C9E94_RS19410;Dbxref=GenBank:WP_000447529.1;Name=WP_000447529.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=C9E94_RS19410;product=50S ribosomal protein L22;protein_id=WP_000447529.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	21253	21531	.	-	.	ID=gene-C9E94_RS19415;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=C9E94_RS19415;old_locus_tag=C9E94_19895
NZ_PYJR01000128.1	Protein Homology	CDS	21253	21531	.	-	0	ID=cds-WP_001138115.1;Parent=gene-C9E94_RS19415;Dbxref=GenBank:WP_001138115.1;Name=WP_001138115.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=C9E94_RS19415;product=30S ribosomal protein S19;protein_id=WP_001138115.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	21548	22369	.	-	.	ID=gene-C9E94_RS19420;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=C9E94_RS19420;old_locus_tag=C9E94_19900
NZ_PYJR01000128.1	Protein Homology	CDS	21548	22369	.	-	0	ID=cds-WP_000301869.1;Parent=gene-C9E94_RS19420;Dbxref=GenBank:WP_000301869.1;Name=WP_000301869.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=C9E94_RS19420;product=50S ribosomal protein L2;protein_id=WP_000301869.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	22387	22689	.	-	.	ID=gene-C9E94_RS19425;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=C9E94_RS19425;old_locus_tag=C9E94_19905
NZ_PYJR01000128.1	Protein Homology	CDS	22387	22689	.	-	0	ID=cds-WP_000617546.1;Parent=gene-C9E94_RS19425;Dbxref=GenBank:WP_000617546.1;Name=WP_000617546.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=C9E94_RS19425;product=50S ribosomal protein L23;protein_id=WP_000617546.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	22686	23291	.	-	.	ID=gene-C9E94_RS19430;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=C9E94_RS19430;old_locus_tag=C9E94_19910
NZ_PYJR01000128.1	Protein Homology	CDS	22686	23291	.	-	0	ID=cds-WP_000424395.1;Parent=gene-C9E94_RS19430;Dbxref=GenBank:WP_000424395.1;Name=WP_000424395.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=C9E94_RS19430;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	23302	23931	.	-	.	ID=gene-C9E94_RS19435;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=C9E94_RS19435;old_locus_tag=C9E94_19915
NZ_PYJR01000128.1	Protein Homology	CDS	23302	23931	.	-	0	ID=cds-WP_000579838.1;Parent=gene-C9E94_RS19435;Dbxref=GenBank:WP_000579838.1;Name=WP_000579838.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=C9E94_RS19435;product=50S ribosomal protein L3;protein_id=WP_000579838.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	23964	24275	.	-	.	ID=gene-C9E94_RS19440;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=C9E94_RS19440;old_locus_tag=C9E94_19920
NZ_PYJR01000128.1	Protein Homology	CDS	23964	24275	.	-	0	ID=cds-WP_001181005.1;Parent=gene-C9E94_RS19440;Dbxref=GenBank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=C9E94_RS19440;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	24655	25122	.	+	.	ID=gene-C9E94_RS19445;Name=hopD;gbkey=Gene;gene=hopD;gene_biotype=protein_coding;locus_tag=C9E94_RS19445;old_locus_tag=C9E94_19930
NZ_PYJR01000128.1	Protein Homology	CDS	24655	25122	.	+	0	ID=cds-WP_023240065.1;Parent=gene-C9E94_RS19445;Dbxref=GenBank:WP_023240065.1;Name=WP_023240065.1;gbkey=CDS;gene=hopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462346.1;locus_tag=C9E94_RS19445;product=prepilin peptidase;protein_id=WP_023240065.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	25119	25595	.	-	.	ID=gene-C9E94_RS19450;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=C9E94_RS19450;old_locus_tag=C9E94_19935
NZ_PYJR01000128.1	Protein Homology	CDS	25119	25595	.	-	0	ID=cds-WP_000675530.1;Parent=gene-C9E94_RS19450;Dbxref=GenBank:WP_000675530.1;Name=WP_000675530.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462347.1;locus_tag=C9E94_RS19450;product=bacterioferritin;protein_id=WP_000675530.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	gene	25668	25862	.	-	.	ID=gene-C9E94_RS19455;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=C9E94_RS19455;old_locus_tag=C9E94_19940
NZ_PYJR01000128.1	Protein Homology	CDS	25668	25862	.	-	0	ID=cds-WP_000289082.1;Parent=gene-C9E94_RS19455;Dbxref=GenBank:WP_000289082.1;Name=WP_000289082.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462348.1;locus_tag=C9E94_RS19455;product=bacterioferritin-associated ferredoxin;protein_id=WP_000289082.1;transl_table=11
NZ_PYJR01000128.1	RefSeq	pseudogene	26047	26183	.	-	.	ID=gene-C9E94_RS19460;Name=tuf;end_range=26183,.;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=C9E94_RS19460;old_locus_tag=C9E94_19955;partial=true;pseudo=true
NZ_PYJR01000128.1	Protein Homology	CDS	26047	26183	.	-	2	ID=cds-C9E94_RS19460;Parent=gene-C9E94_RS19460;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=26183,.;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=C9E94_RS19460;partial=true;product=elongation factor Tu;pseudo=true;transl_table=11
##sequence-region NZ_PYJR01000075.1 1 26041
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000075.1	RefSeq	region	1	26041	.	+	.	ID=NZ_PYJR01000075.1:1..26041;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000075.1	RefSeq	gene	171	872	.	-	.	ID=gene-C9E94_RS09585;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=C9E94_RS09585;old_locus_tag=C9E94_09805
NZ_PYJR01000075.1	Protein Homology	CDS	171	872	.	-	0	ID=cds-WP_000209831.1;Parent=gene-C9E94_RS09585;Dbxref=GenBank:WP_000209831.1;Name=WP_000209831.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462864.1;locus_tag=C9E94_RS09585;product=NAD(P)H-flavin reductase;protein_id=WP_000209831.1;transl_table=11
NZ_PYJR01000075.1	RefSeq	gene	958	2436	.	-	.	ID=gene-C9E94_RS09590;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=C9E94_RS09590;old_locus_tag=C9E94_09810
NZ_PYJR01000075.1	Protein Homology	CDS	958	2436	.	-	0	ID=cds-WP_000339760.1;Parent=gene-C9E94_RS09590;Dbxref=GenBank:WP_000339760.1;Name=WP_000339760.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462863.1;locus_tag=C9E94_RS09590;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_000339760.1;transl_table=11
NZ_PYJR01000075.1	RefSeq	gene	2622	3110	.	+	.	ID=gene-C9E94_RS09595;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=C9E94_RS09595;old_locus_tag=C9E94_09815
NZ_PYJR01000075.1	Protein Homology	CDS	2622	3110	.	+	0	ID=cds-WP_001192410.1;Parent=gene-C9E94_RS09595;Dbxref=GenBank:WP_001192410.1;Name=WP_001192410.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462862.1;locus_tag=C9E94_RS09595;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_001192410.1;transl_table=11
NZ_PYJR01000075.1	RefSeq	gene	3118	3900	.	-	.	ID=gene-C9E94_RS09600;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=C9E94_RS09600;old_locus_tag=C9E94_09820
NZ_PYJR01000075.1	Protein Homology	CDS	3118	3900	.	-	0	ID=cds-WP_080169695.1;Parent=gene-C9E94_RS09600;Dbxref=GenBank:WP_080169695.1;Name=WP_080169695.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462861.3;locus_tag=C9E94_RS09600;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_080169695.1;transl_table=11
NZ_PYJR01000075.1	RefSeq	gene	3942	4721	.	-	.	ID=gene-C9E94_RS09605;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=C9E94_RS09605;old_locus_tag=C9E94_09825
NZ_PYJR01000075.1	Protein Homology	CDS	3942	4721	.	-	0	ID=cds-WP_080169696.1;Parent=gene-C9E94_RS09605;Dbxref=GenBank:WP_080169696.1;Name=WP_080169696.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462860.1;locus_tag=C9E94_RS09605;product=Sec-independent protein translocase subunit TatC;protein_id=WP_080169696.1;transl_table=11
NZ_PYJR01000075.1	RefSeq	gene	4724	5272	.	-	.	ID=gene-C9E94_RS09610;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=C9E94_RS09610;old_locus_tag=C9E94_09830
NZ_PYJR01000075.1	Protein Homology	CDS	4724	5272	.	-	0	ID=cds-WP_000459612.1;Parent=gene-C9E94_RS09610;Dbxref=GenBank:WP_000459612.1;Name=WP_000459612.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462859.1;locus_tag=C9E94_RS09610;product=Sec-independent protein translocase protein TatB;protein_id=WP_000459612.1;transl_table=11
NZ_PYJR01000075.1	RefSeq	gene	5276	5530	.	-	.	ID=gene-C9E94_RS09615;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=C9E94_RS09615;old_locus_tag=C9E94_09835
NZ_PYJR01000075.1	Protein Homology	CDS	5276	5530	.	-	0	ID=cds-WP_000508972.1;Parent=gene-C9E94_RS09615;Dbxref=GenBank:WP_000508972.1;Name=WP_000508972.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462858.1;locus_tag=C9E94_RS09615;product=Sec-independent protein translocase subunit TatA;protein_id=WP_000508972.1;transl_table=11
NZ_PYJR01000075.1	RefSeq	gene	5736	7376	.	-	.	ID=gene-C9E94_RS09620;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=C9E94_RS09620;old_locus_tag=C9E94_09840
NZ_PYJR01000075.1	Protein Homology	CDS	5736	7376	.	-	0	ID=cds-WP_000187559.1;Parent=gene-C9E94_RS09620;Dbxref=GenBank:WP_000187559.1;Name=WP_000187559.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462857.1;locus_tag=C9E94_RS09620;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_000187559.1;transl_table=11
NZ_PYJR01000075.1	RefSeq	gene	7373	7978	.	-	.	ID=gene-C9E94_RS09625;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=C9E94_RS09625;old_locus_tag=C9E94_09845
NZ_PYJR01000075.1	Protein Homology	CDS	7373	7978	.	-	0	ID=cds-WP_001116090.1;Parent=gene-C9E94_RS09625;Dbxref=GenBank:WP_001116090.1;Name=WP_001116090.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462856.1;locus_tag=C9E94_RS09625;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_001116090.1;transl_table=11
NZ_PYJR01000075.1	RefSeq	gene	7988	8743	.	-	.	ID=gene-C9E94_RS09630;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=C9E94_RS09630;old_locus_tag=C9E94_09850
NZ_PYJR01000075.1	Protein Homology	CDS	7988	8743	.	-	0	ID=cds-WP_000229009.1;Parent=gene-C9E94_RS09630;Dbxref=GenBank:WP_000229009.1;Name=WP_000229009.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462855.1;locus_tag=C9E94_RS09630;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_000229009.1;transl_table=11
NZ_PYJR01000075.1	RefSeq	gene	8839	10269	.	-	.	ID=gene-C9E94_RS09635;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=C9E94_RS09635;old_locus_tag=C9E94_09855
NZ_PYJR01000075.1	Protein Homology	CDS	8839	10269	.	-	0	ID=cds-WP_000355562.1;Parent=gene-C9E94_RS09635;Dbxref=GenBank:WP_000355562.1;Name=WP_000355562.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462854.1;locus_tag=C9E94_RS09635;product=DNA recombination protein RmuC;protein_id=WP_000355562.1;transl_table=11
NZ_PYJR01000075.1	RefSeq	gene	10409	11170	.	-	.	ID=gene-C9E94_RS09640;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=C9E94_RS09640;old_locus_tag=C9E94_09860
NZ_PYJR01000075.1	Protein Homology	CDS	10409	11170	.	-	0	ID=cds-WP_000045169.1;Parent=gene-C9E94_RS09640;Dbxref=GenBank:WP_000045169.1;Name=WP_000045169.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462853.1;locus_tag=C9E94_RS09640;product=uridine phosphorylase;protein_id=WP_000045169.1;transl_table=11
NZ_PYJR01000075.1	RefSeq	gene	11429	12241	.	+	.	ID=gene-C9E94_RS09645;Name=C9E94_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09645;old_locus_tag=C9E94_09865
NZ_PYJR01000075.1	Protein Homology	CDS	11429	12241	.	+	0	ID=cds-WP_000213959.1;Parent=gene-C9E94_RS09645;Dbxref=GenBank:WP_000213959.1;Name=WP_000213959.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462852.1;locus_tag=C9E94_RS09645;product=dienelactone hydrolase family protein;protein_id=WP_000213959.1;transl_table=11
NZ_PYJR01000075.1	RefSeq	gene	12321	13664	.	-	.	ID=gene-C9E94_RS09650;Name=C9E94_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09650;old_locus_tag=C9E94_09870
NZ_PYJR01000075.1	Protein Homology	CDS	12321	13664	.	-	0	ID=cds-WP_000017941.1;Parent=gene-C9E94_RS09650;Dbxref=GenBank:WP_000017941.1;Name=WP_000017941.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462851.1;locus_tag=C9E94_RS09650;product=anaerobic sulfatase maturase;protein_id=WP_000017941.1;transl_table=11
NZ_PYJR01000075.1	RefSeq	gene	13999	16263	.	-	.	ID=gene-C9E94_RS09660;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=C9E94_RS09660;old_locus_tag=C9E94_09875
NZ_PYJR01000075.1	Protein Homology	CDS	13999	16263	.	-	0	ID=cds-WP_000154195.1;Parent=gene-C9E94_RS09660;Dbxref=GenBank:WP_000154195.1;Name=WP_000154195.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462850.1;locus_tag=C9E94_RS09660;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_000154195.1;transl_table=11
NZ_PYJR01000075.1	RefSeq	gene	16512	17465	.	+	.	ID=gene-C9E94_RS09665;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=C9E94_RS09665;old_locus_tag=C9E94_09880
NZ_PYJR01000075.1	Protein Homology	CDS	16512	17465	.	+	0	ID=cds-WP_000569786.1;Parent=gene-C9E94_RS09665;Dbxref=GenBank:WP_000569786.1;Name=WP_000569786.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462849.1;locus_tag=C9E94_RS09665;product=HTH-type transcriptional regulator MetR;protein_id=WP_000569786.1;transl_table=11
NZ_PYJR01000075.1	RefSeq	gene	17353	18252	.	-	.	ID=gene-C9E94_RS09670;Name=C9E94_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09670;old_locus_tag=C9E94_09885
NZ_PYJR01000075.1	Protein Homology	CDS	17353	18252	.	-	0	ID=cds-WP_001196257.1;Parent=gene-C9E94_RS09670;Dbxref=GenBank:WP_001196257.1;Name=WP_001196257.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462848.1;locus_tag=C9E94_RS09670;product=carboxylate/amino acid/amine transporter;protein_id=WP_001196257.1;transl_table=11
NZ_PYJR01000075.1	RefSeq	gene	18333	19133	.	-	.	ID=gene-C9E94_RS09675;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=C9E94_RS09675;old_locus_tag=C9E94_09890
NZ_PYJR01000075.1	Protein Homology	CDS	18333	19133	.	-	0	ID=cds-WP_000285338.1;Parent=gene-C9E94_RS09675;Dbxref=GenBank:WP_000285338.1;Name=WP_000285338.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462847.1;locus_tag=C9E94_RS09675;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_000285338.1;transl_table=11
NZ_PYJR01000075.1	RefSeq	gene	19149	20165	.	-	.	ID=gene-C9E94_RS09680;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=C9E94_RS09680;old_locus_tag=C9E94_09895
NZ_PYJR01000075.1	Protein Homology	CDS	19149	20165	.	-	0	ID=cds-WP_000487682.1;Parent=gene-C9E94_RS09680;Dbxref=GenBank:WP_000487682.1;Name=WP_000487682.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462846.1;locus_tag=C9E94_RS09680;product=lysophospholipase L2;protein_id=WP_000487682.1;transl_table=11
NZ_PYJR01000075.1	RefSeq	gene	20276	20896	.	+	.	ID=gene-C9E94_RS09685;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=C9E94_RS09685;old_locus_tag=C9E94_09900
NZ_PYJR01000075.1	Protein Homology	CDS	20276	20896	.	+	0	ID=cds-WP_000142524.1;Parent=gene-C9E94_RS09685;Dbxref=GenBank:WP_000142524.1;Name=WP_000142524.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462845.1;locus_tag=C9E94_RS09685;product=homoserine/homoserine lactone efflux protein;protein_id=WP_000142524.1;transl_table=11
NZ_PYJR01000075.1	RefSeq	gene	20936	21556	.	-	.	ID=gene-C9E94_RS09690;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=C9E94_RS09690;old_locus_tag=C9E94_09905
NZ_PYJR01000075.1	Protein Homology	CDS	20936	21556	.	-	0	ID=cds-WP_000928814.1;Parent=gene-C9E94_RS09690;Dbxref=GenBank:WP_000928814.1;Name=WP_000928814.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462844.1;locus_tag=C9E94_RS09690;product=threonine export protein RhtC;protein_id=WP_000928814.1;transl_table=11
NZ_PYJR01000075.1	RefSeq	gene	21620	23449	.	-	.	ID=gene-C9E94_RS09695;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=C9E94_RS09695;old_locus_tag=C9E94_09910
NZ_PYJR01000075.1	Protein Homology	CDS	21620	23449	.	-	0	ID=cds-WP_001533487.1;Parent=gene-C9E94_RS09695;Dbxref=GenBank:WP_001533487.1;Name=WP_001533487.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=C9E94_RS09695;product=ATP-dependent DNA helicase RecQ;protein_id=WP_001533487.1;transl_table=11
NZ_PYJR01000075.1	RefSeq	gene	23533	24402	.	-	.	ID=gene-C9E94_RS09700;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=C9E94_RS09700;old_locus_tag=C9E94_09915
NZ_PYJR01000075.1	Protein Homology	CDS	23533	24402	.	-	0	ID=cds-WP_001201692.1;Parent=gene-C9E94_RS09700;Dbxref=GenBank:WP_001201692.1;Name=WP_001201692.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462842.1;locus_tag=C9E94_RS09700;product=phospholipase A;protein_id=WP_001201692.1;transl_table=11
NZ_PYJR01000075.1	RefSeq	gene	24567	25034	.	+	.	ID=gene-C9E94_RS09705;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=C9E94_RS09705;old_locus_tag=C9E94_09920
NZ_PYJR01000075.1	Protein Homology	CDS	24567	25034	.	+	0	ID=cds-WP_001277136.1;Parent=gene-C9E94_RS09705;Dbxref=GenBank:WP_001277136.1;Name=WP_001277136.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=C9E94_RS09705;product=acyl-CoA thioesterase YigI;protein_id=WP_001277136.1;transl_table=11
NZ_PYJR01000075.1	RefSeq	gene	25078	25965	.	+	.	ID=gene-C9E94_RS09710;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=C9E94_RS09710;old_locus_tag=C9E94_09925
NZ_PYJR01000075.1	Protein Homology	CDS	25078	25965	.	+	0	ID=cds-WP_000339081.1;Parent=gene-C9E94_RS09710;Dbxref=GenBank:WP_000339081.1;Name=WP_000339081.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000339076.1;locus_tag=C9E94_RS09710;product=EamA family transporter RarD;protein_id=WP_000339081.1;transl_table=11
##sequence-region NZ_PYJR01000105.1 1 132035
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000105.1	RefSeq	region	1	132035	.	+	.	ID=NZ_PYJR01000105.1:1..132035;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000105.1	RefSeq	gene	89	173	.	-	.	ID=gene-C9E94_RS15420;Name=C9E94_RS15420;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS15420;old_locus_tag=C9E94_15795
NZ_PYJR01000105.1	tRNAscan-SE	tRNA	89	173	.	-	.	ID=rna-C9E94_RS15420;Parent=gene-C9E94_RS15420;anticodon=(pos:complement(137..139));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS15420;product=tRNA-Tyr
NZ_PYJR01000105.1	tRNAscan-SE	exon	89	173	.	-	.	ID=exon-C9E94_RS15420-1;Parent=rna-C9E94_RS15420;anticodon=(pos:complement(137..139));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS15420;product=tRNA-Tyr
NZ_PYJR01000105.1	RefSeq	gene	202	343	.	-	.	ID=gene-C9E94_RS15425;Name=C9E94_RS15425;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E94_RS15425;old_locus_tag=C9E94_15800
NZ_PYJR01000105.1	cmsearch	ncRNA	202	343	.	-	.	ID=rna-C9E94_RS15425;Parent=gene-C9E94_RS15425;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS15425;product=RtT sRNA
NZ_PYJR01000105.1	cmsearch	exon	202	343	.	-	.	ID=exon-C9E94_RS15425-1;Parent=rna-C9E94_RS15425;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS15425;product=RtT sRNA
NZ_PYJR01000105.1	RefSeq	gene	514	1356	.	-	.	ID=gene-C9E94_RS15430;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=C9E94_RS15430;old_locus_tag=C9E94_15805
NZ_PYJR01000105.1	Protein Homology	CDS	514	1356	.	-	0	ID=cds-WP_001191156.1;Parent=gene-C9E94_RS15430;Dbxref=GenBank:WP_001191156.1;Name=WP_001191156.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460715.1;locus_tag=C9E94_RS15430;product=formyltetrahydrofolate deformylase;protein_id=WP_001191156.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	1407	1865	.	-	.	ID=gene-C9E94_RS15435;Name=C9E94_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15435;old_locus_tag=C9E94_15810
NZ_PYJR01000105.1	Protein Homology	CDS	1407	1865	.	-	0	ID=cds-WP_001540172.1;Parent=gene-C9E94_RS15435;Dbxref=GenBank:WP_001540172.1;Name=WP_001540172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460714.1;locus_tag=C9E94_RS15435;product=YchJ family protein;protein_id=WP_001540172.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	1976	2881	.	+	.	ID=gene-C9E94_RS15440;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=C9E94_RS15440;old_locus_tag=C9E94_15815
NZ_PYJR01000105.1	Protein Homology	CDS	1976	2881	.	+	0	ID=cds-WP_001230575.1;Parent=gene-C9E94_RS15440;Dbxref=GenBank:WP_001230575.1;Name=WP_001230575.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=phosphatidylcholine lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460713.1;locus_tag=C9E94_RS15440;product=patatin-like phospholipase RssA;protein_id=WP_001230575.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	2972	3985	.	+	.	ID=gene-C9E94_RS15445;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=C9E94_RS15445;old_locus_tag=C9E94_15820
NZ_PYJR01000105.1	Protein Homology	CDS	2972	3985	.	+	0	ID=cds-WP_000193432.1;Parent=gene-C9E94_RS15445;Dbxref=GenBank:WP_000193432.1;Name=WP_000193432.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460712.1;locus_tag=C9E94_RS15445;product=two-component system response regulator RssB;protein_id=WP_000193432.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	4188	5096	.	+	.	ID=gene-C9E94_RS15450;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=C9E94_RS15450;old_locus_tag=C9E94_15825
NZ_PYJR01000105.1	Protein Homology	CDS	4188	5096	.	+	0	ID=cds-WP_000729450.1;Parent=gene-C9E94_RS15450;Dbxref=GenBank:WP_000729450.1;Name=WP_000729450.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460711.1;locus_tag=C9E94_RS15450;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_000729450.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	5228	5641	.	-	.	ID=gene-C9E94_RS15455;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=C9E94_RS15455;old_locus_tag=C9E94_15830
NZ_PYJR01000105.1	Protein Homology	CDS	5228	5641	.	-	0	ID=cds-WP_001287383.1;Parent=gene-C9E94_RS15455;Dbxref=GenBank:WP_001287383.1;Name=WP_001287383.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460710.1;locus_tag=C9E94_RS15455;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_001287383.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	6304	6921	.	+	.	ID=gene-C9E94_RS15460;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=C9E94_RS15460;old_locus_tag=C9E94_15835
NZ_PYJR01000105.1	Protein Homology	CDS	6304	6921	.	+	0	ID=cds-WP_000068097.1;Parent=gene-C9E94_RS15460;Dbxref=GenBank:WP_000068097.1;Name=WP_000068097.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460709.1;locus_tag=C9E94_RS15460;product=thymidine kinase;protein_id=WP_000068097.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	7118	9796	.	-	.	ID=gene-C9E94_RS15465;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=C9E94_RS15465;old_locus_tag=C9E94_15840
NZ_PYJR01000105.1	Protein Homology	CDS	7118	9796	.	-	0	ID=cds-WP_135401121.1;Parent=gene-C9E94_RS15465;Dbxref=GenBank:WP_135401121.1;Name=WP_135401121.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=C9E94_RS15465;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_135401121.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	10273	10920	.	+	.	ID=gene-C9E94_RS15470;Name=C9E94_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15470;old_locus_tag=C9E94_15845
NZ_PYJR01000105.1	Protein Homology	CDS	10273	10920	.	+	0	ID=cds-WP_000615840.1;Parent=gene-C9E94_RS15470;Dbxref=GenBank:WP_000615840.1;Name=WP_000615840.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460707.1;locus_tag=C9E94_RS15470;product=YchE family NAAT transporter;protein_id=WP_000615840.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	11697	13328	.	+	.	ID=gene-C9E94_RS15480;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=C9E94_RS15480;old_locus_tag=C9E94_15855
NZ_PYJR01000105.1	Protein Homology	CDS	11697	13328	.	+	0	ID=cds-WP_001521098.1;Parent=gene-C9E94_RS15480;Dbxref=GenBank:WP_001521098.1;Name=WP_001521098.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001672805.1;locus_tag=C9E94_RS15480;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_001521098.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	13450	14370	.	+	.	ID=gene-C9E94_RS15485;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=C9E94_RS15485;old_locus_tag=C9E94_15860
NZ_PYJR01000105.1	Protein Homology	CDS	13450	14370	.	+	0	ID=cds-WP_000911097.1;Parent=gene-C9E94_RS15485;Dbxref=GenBank:WP_000911097.1;Name=WP_000911097.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=C9E94_RS15485;product=oligopeptide ABC transporter permease OppB;protein_id=WP_000911097.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	14385	15293	.	+	.	ID=gene-C9E94_RS15490;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=C9E94_RS15490;old_locus_tag=C9E94_15865
NZ_PYJR01000105.1	Protein Homology	CDS	14385	15293	.	+	0	ID=cds-WP_000979653.1;Parent=gene-C9E94_RS15490;Dbxref=GenBank:WP_000979653.1;Name=WP_000979653.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=C9E94_RS15490;product=oligopeptide ABC transporter permease OppC;protein_id=WP_000979653.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	15305	16312	.	+	.	ID=gene-C9E94_RS15495;Name=C9E94_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15495;old_locus_tag=C9E94_15870
NZ_PYJR01000105.1	Protein Homology	CDS	15305	16312	.	+	0	ID=cds-WP_000058862.1;Parent=gene-C9E94_RS15495;Dbxref=GenBank:WP_000058862.1;Name=WP_000058862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460702.1;locus_tag=C9E94_RS15495;product=ABC transporter ATP-binding protein;protein_id=WP_000058862.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	16309	17313	.	+	.	ID=gene-C9E94_RS15500;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=C9E94_RS15500;old_locus_tag=C9E94_15875
NZ_PYJR01000105.1	Protein Homology	CDS	16309	17313	.	+	0	ID=cds-WP_000994698.1;Parent=gene-C9E94_RS15500;Dbxref=GenBank:WP_000994698.1;Name=WP_000994698.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=C9E94_RS15500;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_000994698.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	17361	18197	.	+	.	ID=gene-C9E94_RS15505;Name=C9E94_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15505;old_locus_tag=C9E94_15880
NZ_PYJR01000105.1	Protein Homology	CDS	17361	18197	.	+	0	ID=cds-WP_000059074.1;Parent=gene-C9E94_RS15505;Dbxref=GenBank:WP_000059074.1;Name=WP_000059074.1;Ontology_term=GO:0006811,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460700.1;locus_tag=C9E94_RS15505;product=ion transporter;protein_id=WP_000059074.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	18245	18574	.	-	.	ID=gene-C9E94_RS15510;Name=C9E94_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15510;old_locus_tag=C9E94_15885
NZ_PYJR01000105.1	Protein Homology	CDS	18245	18574	.	-	0	ID=cds-WP_000425070.1;Parent=gene-C9E94_RS15510;Dbxref=GenBank:WP_000425070.1;Name=WP_000425070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448158.1;locus_tag=C9E94_RS15510;product=HI1450 family dsDNA-mimic protein;protein_id=WP_000425070.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	18608	20068	.	-	.	ID=gene-C9E94_RS15515;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=C9E94_RS15515;old_locus_tag=C9E94_15890
NZ_PYJR01000105.1	Protein Homology	CDS	18608	20068	.	-	0	ID=cds-WP_000206886.1;Parent=gene-C9E94_RS15515;Dbxref=GenBank:WP_000206886.1;Name=WP_000206886.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=C9E94_RS15515;product=cardiolipin synthase;protein_id=WP_000206886.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	20211	20384	.	+	.	ID=gene-C9E94_RS15520;Name=C9E94_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15520
NZ_PYJR01000105.1	Protein Homology	CDS	20211	20384	.	+	0	ID=cds-WP_001531561.1;Parent=gene-C9E94_RS15520;Dbxref=GenBank:WP_001531561.1;Name=WP_001531561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=C9E94_RS15520;product=YciY family protein;protein_id=WP_001531561.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	20428	20724	.	-	.	ID=gene-C9E94_RS15525;Name=C9E94_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15525;old_locus_tag=C9E94_15895
NZ_PYJR01000105.1	Protein Homology	CDS	20428	20724	.	-	0	ID=cds-WP_000967605.1;Parent=gene-C9E94_RS15525;Dbxref=GenBank:WP_000967605.1;Name=WP_000967605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460697.1;locus_tag=C9E94_RS15525;product=YciI family protein;protein_id=WP_000967605.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	20948	21670	.	+	.	ID=gene-C9E94_RS15530;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=C9E94_RS15530;old_locus_tag=C9E94_15900
NZ_PYJR01000105.1	Protein Homology	CDS	20948	21670	.	+	0	ID=cds-WP_001532427.1;Parent=gene-C9E94_RS15530;Dbxref=GenBank:WP_001532427.1;Name=WP_001532427.1;Ontology_term=GO:0015891,GO:0055085,GO:0015343,GO:0030288;gbkey=CDS;gene=tonB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460696.1;locus_tag=C9E94_RS15530;product=TonB system transport protein TonB;protein_id=WP_001532427.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	21730	22131	.	-	.	ID=gene-C9E94_RS15535;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=C9E94_RS15535;old_locus_tag=C9E94_15905
NZ_PYJR01000105.1	Protein Homology	CDS	21730	22131	.	-	0	ID=cds-WP_000210317.1;Parent=gene-C9E94_RS15535;Dbxref=GenBank:WP_000210317.1;Name=WP_000210317.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460695.1;locus_tag=C9E94_RS15535;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000210317.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	22292	22831	.	-	.	ID=gene-C9E94_RS15540;Name=C9E94_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15540;old_locus_tag=C9E94_15910
NZ_PYJR01000105.1	Protein Homology	CDS	22292	22831	.	-	0	ID=cds-WP_000808682.1;Parent=gene-C9E94_RS15540;Dbxref=GenBank:WP_000808682.1;Name=WP_000808682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460694.1;locus_tag=C9E94_RS15540;product=septation protein A;protein_id=WP_000808682.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	22888	23631	.	-	.	ID=gene-C9E94_RS15545;Name=C9E94_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15545;old_locus_tag=C9E94_15915
NZ_PYJR01000105.1	Protein Homology	CDS	22888	23631	.	-	0	ID=cds-WP_000028507.1;Parent=gene-C9E94_RS15545;Dbxref=GenBank:WP_000028507.1;Name=WP_000028507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460693.1;locus_tag=C9E94_RS15545;product=YciC family protein;protein_id=WP_000028507.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	23657	24061	.	-	.	ID=gene-C9E94_RS15550;Name=C9E94_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15550;old_locus_tag=C9E94_15920
NZ_PYJR01000105.1	Protein Homology	CDS	23657	24061	.	-	0	ID=cds-WP_000114955.1;Parent=gene-C9E94_RS15550;Dbxref=GenBank:WP_000114955.1;Name=WP_000114955.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=C9E94_RS15550;product=YkgJ family cysteine cluster protein;protein_id=WP_000114955.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	24399	25037	.	+	.	ID=gene-C9E94_RS15555;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=C9E94_RS15555;old_locus_tag=C9E94_15925
NZ_PYJR01000105.1	Protein Homology	CDS	24399	25037	.	+	0	ID=cds-WP_000714801.1;Parent=gene-C9E94_RS15555;Dbxref=GenBank:WP_000714801.1;Name=WP_000714801.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460691.1;locus_tag=C9E94_RS15555;product=outer membrane protein OmpW;protein_id=WP_000714801.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	25119	25997	.	-	.	ID=gene-C9E94_RS15560;Name=C9E94_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15560;old_locus_tag=C9E94_15930
NZ_PYJR01000105.1	Protein Homology	CDS	25119	25997	.	-	0	ID=cds-WP_000488354.1;Parent=gene-C9E94_RS15560;Dbxref=GenBank:WP_000488354.1;Name=WP_000488354.1;Ontology_term=GO:0004096,GO:0046872;gbkey=CDS;go_function=catalase activity|0004096||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460690.1;locus_tag=C9E94_RS15560;product=manganese catalase family protein;protein_id=WP_000488354.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	26017	26523	.	-	.	ID=gene-C9E94_RS15565;Name=C9E94_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15565;old_locus_tag=C9E94_15935
NZ_PYJR01000105.1	Protein Homology	CDS	26017	26523	.	-	0	ID=cds-WP_001109977.1;Parent=gene-C9E94_RS15565;Dbxref=GenBank:WP_001109977.1;Name=WP_001109977.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460689.1;locus_tag=C9E94_RS15565;product=ferritin-like domain-containing protein;protein_id=WP_001109977.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	26597	27100	.	-	.	ID=gene-C9E94_RS15570;Name=C9E94_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15570;old_locus_tag=C9E94_15940
NZ_PYJR01000105.1	Protein Homology	CDS	26597	27100	.	-	0	ID=cds-WP_001022822.1;Parent=gene-C9E94_RS15570;Dbxref=GenBank:WP_001022822.1;Name=WP_001022822.1;Ontology_term=GO:0004322,GO:0005506,GO:0046872;gbkey=CDS;go_function=ferroxidase activity|0004322||IEA,iron ion binding|0005506||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460688.1;locus_tag=C9E94_RS15570;product=YciE/YciF ferroxidase family protein;protein_id=WP_001022822.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	27190	27372	.	-	.	ID=gene-C9E94_RS15575;Name=C9E94_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15575;old_locus_tag=C9E94_15945
NZ_PYJR01000105.1	Protein Homology	CDS	27190	27372	.	-	0	ID=cds-WP_000807657.1;Parent=gene-C9E94_RS15575;Dbxref=GenBank:WP_000807657.1;Name=WP_000807657.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460687.1;locus_tag=C9E94_RS15575;product=general stress protein;protein_id=WP_000807657.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	27852	28658	.	-	.	ID=gene-C9E94_RS15580;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=C9E94_RS15580;old_locus_tag=C9E94_15950
NZ_PYJR01000105.1	Protein Homology	CDS	27852	28658	.	-	0	ID=cds-WP_000443029.1;Parent=gene-C9E94_RS15580;Dbxref=GenBank:WP_000443029.1;Name=WP_000443029.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460686.1;locus_tag=C9E94_RS15580;product=tryptophan synthase subunit alpha;protein_id=WP_000443029.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	28658	29851	.	-	.	ID=gene-C9E94_RS15585;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=C9E94_RS15585;old_locus_tag=C9E94_15955
NZ_PYJR01000105.1	Protein Homology	CDS	28658	29851	.	-	0	ID=cds-WP_000209485.1;Parent=gene-C9E94_RS15585;Dbxref=GenBank:WP_000209485.1;Name=WP_000209485.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460685.1;locus_tag=C9E94_RS15585;product=tryptophan synthase subunit beta;protein_id=WP_000209485.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	29861	31219	.	-	.	ID=gene-C9E94_RS15590;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=C9E94_RS15590;old_locus_tag=C9E94_15960
NZ_PYJR01000105.1	Protein Homology	CDS	29861	31219	.	-	0	ID=cds-WP_135401122.1;Parent=gene-C9E94_RS15590;Dbxref=GenBank:WP_135401122.1;Name=WP_135401122.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460684.1;locus_tag=C9E94_RS15590;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_135401122.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	31223	32818	.	-	.	ID=gene-C9E94_RS15595;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=C9E94_RS15595;old_locus_tag=C9E94_15965
NZ_PYJR01000105.1	Protein Homology	CDS	31223	32818	.	-	0	ID=cds-WP_135401123.1;Parent=gene-C9E94_RS15595;Dbxref=GenBank:WP_135401123.1;Name=WP_135401123.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=C9E94_RS15595;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_135401123.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	32818	34380	.	-	.	ID=gene-C9E94_RS15600;Name=C9E94_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15600;old_locus_tag=C9E94_15970
NZ_PYJR01000105.1	Protein Homology	CDS	32818	34380	.	-	0	ID=cds-WP_135401124.1;Parent=gene-C9E94_RS15600;Dbxref=GenBank:WP_135401124.1;Name=WP_135401124.1;Ontology_term=GO:0009058,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460682.1;locus_tag=C9E94_RS15600;product=anthranilate synthase component 1;protein_id=WP_135401124.1;transl_table=11
NZ_PYJR01000105.1	cmsearch	sequence_feature	34403	34498	.	-	.	ID=id-NZ_PYJR01000105.1:34403..34498;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PYJR01000105.1	RefSeq	gene	34475	34519	.	-	.	ID=gene-C9E94_RS15605;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=C9E94_RS15605;old_locus_tag=C9E94_15975
NZ_PYJR01000105.1	Protein Homology	CDS	34475	34519	.	-	0	ID=cds-WP_010989026.1;Parent=gene-C9E94_RS15605;Dbxref=GenBank:WP_010989026.1;Name=WP_010989026.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448140.1;locus_tag=C9E94_RS15605;product=trp operon leader peptide;protein_id=WP_010989026.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	34641	35522	.	+	.	ID=gene-C9E94_RS15610;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=C9E94_RS15610;old_locus_tag=C9E94_15980
NZ_PYJR01000105.1	Protein Homology	CDS	34641	35522	.	+	0	ID=cds-WP_135401125.1;Parent=gene-C9E94_RS15610;Dbxref=GenBank:WP_135401125.1;Name=WP_135401125.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460680.1;locus_tag=C9E94_RS15610;product=RNase RNM;protein_id=WP_135401125.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	35530	36150	.	+	.	ID=gene-C9E94_RS15615;Name=C9E94_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15615;old_locus_tag=C9E94_15985
NZ_PYJR01000105.1	Protein Homology	CDS	35530	36150	.	+	0	ID=cds-WP_000077250.1;Parent=gene-C9E94_RS15615;Dbxref=GenBank:WP_000077250.1;Name=WP_000077250.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=C9E94_RS15615;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_000077250.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	36251	37126	.	+	.	ID=gene-C9E94_RS15620;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=C9E94_RS15620;old_locus_tag=C9E94_15990
NZ_PYJR01000105.1	Protein Homology	CDS	36251	37126	.	+	0	ID=cds-WP_001291233.1;Parent=gene-C9E94_RS15620;Dbxref=GenBank:WP_001291233.1;Name=WP_001291233.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=C9E94_RS15620;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_001291233.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	37213	37803	.	-	.	ID=gene-C9E94_RS15625;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=C9E94_RS15625;old_locus_tag=C9E94_15995
NZ_PYJR01000105.1	Protein Homology	CDS	37213	37803	.	-	0	ID=cds-WP_001278856.1;Parent=gene-C9E94_RS15625;Dbxref=GenBank:WP_001278856.1;Name=WP_001278856.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460677.1;locus_tag=C9E94_RS15625;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_001278856.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	37800	38561	.	-	.	ID=gene-C9E94_RS15630;Name=C9E94_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15630;old_locus_tag=C9E94_16000
NZ_PYJR01000105.1	Protein Homology	CDS	37800	38561	.	-	0	ID=cds-WP_000559310.1;Parent=gene-C9E94_RS15630;Dbxref=GenBank:WP_000559310.1;Name=WP_000559310.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460676.1;locus_tag=C9E94_RS15630;product=YciK family oxidoreductase;protein_id=WP_000559310.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	38799	39845	.	+	.	ID=gene-C9E94_RS15635;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=C9E94_RS15635;old_locus_tag=C9E94_16005
NZ_PYJR01000105.1	Protein Homology	CDS	38799	39845	.	+	0	ID=cds-WP_000422082.1;Parent=gene-C9E94_RS15635;Dbxref=GenBank:WP_000422082.1;Name=WP_000422082.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460675.1;locus_tag=C9E94_RS15635;product=protease SohB;protein_id=WP_000422082.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	39887	40138	.	-	.	ID=gene-C9E94_RS15640;Name=C9E94_RS15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15640;old_locus_tag=C9E94_16010
NZ_PYJR01000105.1	Protein Homology	CDS	39887	40138	.	-	0	ID=cds-WP_000548616.1;Parent=gene-C9E94_RS15640;Dbxref=GenBank:WP_000548616.1;Name=WP_000548616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460674.1;locus_tag=C9E94_RS15640;product=YciN family protein;protein_id=WP_000548616.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	40541	43138	.	+	.	ID=gene-C9E94_RS15645;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=C9E94_RS15645;old_locus_tag=C9E94_16020
NZ_PYJR01000105.1	Protein Homology	CDS	40541	43138	.	+	0	ID=cds-WP_135401126.1;Parent=gene-C9E94_RS15645;Dbxref=GenBank:WP_135401126.1;Name=WP_135401126.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=C9E94_RS15645;product=type I DNA topoisomerase;protein_id=WP_135401126.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	43549	44523	.	+	.	ID=gene-C9E94_RS15650;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=C9E94_RS15650;old_locus_tag=C9E94_16025
NZ_PYJR01000105.1	Protein Homology	CDS	43549	44523	.	+	0	ID=cds-WP_000776233.1;Parent=gene-C9E94_RS15650;Dbxref=GenBank:WP_000776233.1;Name=WP_000776233.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=C9E94_RS15650;product=HTH-type transcriptional regulator CysB;protein_id=WP_000776233.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	44804	44944	.	+	.	ID=gene-C9E94_RS15655;Name=C9E94_RS15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15655;old_locus_tag=C9E94_16030
NZ_PYJR01000105.1	Protein Homology	CDS	44804	44944	.	+	0	ID=cds-WP_213083417.1;Parent=gene-C9E94_RS15655;Dbxref=GenBank:WP_213083417.1;Name=WP_213083417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=C9E94_RS15655;product=YmiA family putative membrane protein;protein_id=WP_213083417.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	44945	45115	.	+	.	ID=gene-C9E94_RS15660;Name=C9E94_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15660;old_locus_tag=C9E94_16035
NZ_PYJR01000105.1	Protein Homology	CDS	44945	45115	.	+	0	ID=cds-WP_000029027.1;Parent=gene-C9E94_RS15660;Dbxref=GenBank:WP_000029027.1;Name=WP_000029027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000029022.1;locus_tag=C9E94_RS15660;product=hypothetical protein;protein_id=WP_000029027.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	45225	45317	.	+	.	ID=gene-C9E94_RS23685;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=C9E94_RS23685
NZ_PYJR01000105.1	Protein Homology	CDS	45225	45317	.	+	0	ID=cds-WP_223148964.1;Parent=gene-C9E94_RS23685;Dbxref=GenBank:WP_223148964.1;Name=WP_223148964.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_226998799.1;locus_tag=C9E94_RS23685;product=small membrane protein YmiC;protein_id=WP_223148964.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	45500	48175	.	+	.	ID=gene-C9E94_RS15665;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=C9E94_RS15665;old_locus_tag=C9E94_16040
NZ_PYJR01000105.1	Protein Homology	CDS	45500	48175	.	+	0	ID=cds-WP_080152298.1;Parent=gene-C9E94_RS15665;Dbxref=GenBank:WP_080152298.1;Name=WP_080152298.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=C9E94_RS15665;product=aconitate hydratase AcnA;protein_id=WP_080152298.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	48231	48821	.	-	.	ID=gene-C9E94_RS15670;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=C9E94_RS15670;old_locus_tag=C9E94_16045
NZ_PYJR01000105.1	Protein Homology	CDS	48231	48821	.	-	0	ID=cds-WP_001176284.1;Parent=gene-C9E94_RS15670;Dbxref=GenBank:WP_001176284.1;Name=WP_001176284.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460670.1;locus_tag=C9E94_RS15670;product=GTP cyclohydrolase II;protein_id=WP_001176284.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	49017	49781	.	+	.	ID=gene-C9E94_RS15675;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=C9E94_RS15675;old_locus_tag=C9E94_16050
NZ_PYJR01000105.1	Protein Homology	CDS	49017	49781	.	+	0	ID=cds-WP_000948636.1;Parent=gene-C9E94_RS15675;Dbxref=GenBank:WP_000948636.1;Name=WP_000948636.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460669.1;locus_tag=C9E94_RS15675;product=phosphatidylglycerophosphatase B;protein_id=WP_000948636.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	49931	50239	.	+	.	ID=gene-C9E94_RS15680;Name=C9E94_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15680;old_locus_tag=C9E94_16055
NZ_PYJR01000105.1	Protein Homology	CDS	49931	50239	.	+	0	ID=cds-WP_000876301.1;Parent=gene-C9E94_RS15680;Dbxref=GenBank:WP_000876301.1;Name=WP_000876301.1;Ontology_term=GO:0008653,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460668.1;locus_tag=C9E94_RS15680;product=LapA family protein;protein_id=WP_000876301.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	50246	51415	.	+	.	ID=gene-C9E94_RS15685;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=C9E94_RS15685;old_locus_tag=C9E94_16060
NZ_PYJR01000105.1	Protein Homology	CDS	50246	51415	.	+	0	ID=cds-WP_080217432.1;Parent=gene-C9E94_RS15685;Dbxref=GenBank:WP_080217432.1;Name=WP_080217432.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=C9E94_RS15685;product=lipopolysaccharide assembly protein LapB;protein_id=WP_080217432.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	51606	52343	.	+	.	ID=gene-C9E94_RS15690;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=C9E94_RS15690;old_locus_tag=C9E94_16065
NZ_PYJR01000105.1	Protein Homology	CDS	51606	52343	.	+	0	ID=cds-WP_080090940.1;Parent=gene-C9E94_RS15690;Dbxref=GenBank:WP_080090940.1;Name=WP_080090940.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460666.1;locus_tag=C9E94_RS15690;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_080090940.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	52343	52669	.	+	.	ID=gene-C9E94_RS15695;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=C9E94_RS15695;old_locus_tag=C9E94_16070
NZ_PYJR01000105.1	Protein Homology	CDS	52343	52669	.	+	0	ID=cds-WP_001285199.1;Parent=gene-C9E94_RS15695;Dbxref=GenBank:WP_001285199.1;Name=WP_001285199.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460665.1;locus_tag=C9E94_RS15695;product=stress response translation initiation inhibitor YciH;protein_id=WP_001285199.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	52789	53007	.	-	.	ID=gene-C9E94_RS15700;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=C9E94_RS15700;old_locus_tag=C9E94_16075
NZ_PYJR01000105.1	Protein Homology	CDS	52789	53007	.	-	0	ID=cds-WP_000481166.1;Parent=gene-C9E94_RS15700;Dbxref=GenBank:WP_000481166.1;Name=WP_000481166.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=C9E94_RS15700;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_000481166.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	53266	54018	.	-	.	ID=gene-C9E94_RS15705;Name=yciT;gbkey=Gene;gene=yciT;gene_biotype=protein_coding;gene_synonym=deoT;locus_tag=C9E94_RS15705;old_locus_tag=C9E94_16080
NZ_PYJR01000105.1	Protein Homology	CDS	53266	54018	.	-	0	ID=cds-WP_001088593.1;Parent=gene-C9E94_RS15705;Dbxref=GenBank:WP_001088593.1;Name=WP_001088593.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yciT;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460663.1;locus_tag=C9E94_RS15705;product=DNA-binding transcriptional regulator YciT;protein_id=WP_001088593.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	54104	54283	.	-	.	ID=gene-C9E94_RS15710;Name=C9E94_RS15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15710;old_locus_tag=C9E94_16085
NZ_PYJR01000105.1	Protein Homology	CDS	54104	54283	.	-	0	ID=cds-WP_001279854.1;Parent=gene-C9E94_RS15710;Dbxref=GenBank:WP_001279854.1;Name=WP_001279854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279854.1;locus_tag=C9E94_RS15710;product=YciZ family protein;protein_id=WP_001279854.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	54405	56387	.	-	.	ID=gene-C9E94_RS15715;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=C9E94_RS15715;old_locus_tag=C9E94_16090
NZ_PYJR01000105.1	Protein Homology	CDS	54405	56387	.	-	0	ID=cds-WP_023193234.1;Parent=gene-C9E94_RS15715;Dbxref=GenBank:WP_023193234.1;Name=WP_023193234.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=C9E94_RS15715;product=cyclic di-GMP phosphodiesterase;protein_id=WP_023193234.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	56649	58583	.	-	.	ID=gene-C9E94_RS15720;Name=C9E94_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15720;old_locus_tag=C9E94_16100
NZ_PYJR01000105.1	Protein Homology	CDS	56649	58583	.	-	0	ID=cds-WP_000485041.1;Parent=gene-C9E94_RS15720;Dbxref=GenBank:WP_000485041.1;Name=WP_000485041.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460661.1;locus_tag=C9E94_RS15720;product=exoribonuclease II;protein_id=WP_000485041.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	pseudogene	58828	59805	.	-	.	ID=gene-C9E94_RS15725;Name=C9E94_RS15725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS15725;old_locus_tag=C9E94_16105;partial=true;pseudo=true;start_range=.,58828
NZ_PYJR01000105.1	Protein Homology	CDS	58828	59805	.	-	0	ID=cds-C9E94_RS15725;Parent=gene-C9E94_RS15725;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460660.1;locus_tag=C9E94_RS15725;partial=true;product=carboxymuconolactone decarboxylase family protein;pseudo=true;start_range=.,58828;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	60005	60793	.	-	.	ID=gene-C9E94_RS15730;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=C9E94_RS15730;old_locus_tag=C9E94_16110
NZ_PYJR01000105.1	Protein Homology	CDS	60005	60793	.	-	0	ID=cds-WP_000506501.1;Parent=gene-C9E94_RS15730;Dbxref=GenBank:WP_000506501.1;Name=WP_000506501.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=C9E94_RS15730;product=enoyl-ACP reductase FabI;protein_id=WP_000506501.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	60911	61210	.	-	.	ID=gene-C9E94_RS15735;Name=C9E94_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15735;old_locus_tag=C9E94_16115
NZ_PYJR01000105.1	Protein Homology	CDS	60911	61210	.	-	0	ID=cds-WP_079802061.1;Parent=gene-C9E94_RS15735;Dbxref=GenBank:WP_079802061.1;Name=WP_079802061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460658.1;locus_tag=C9E94_RS15735;product=hypothetical protein;protein_id=WP_079802061.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	61185	61364	.	-	.	ID=gene-C9E94_RS15740;Name=C9E94_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15740;old_locus_tag=C9E94_16120
NZ_PYJR01000105.1	Protein Homology	CDS	61185	61364	.	-	0	ID=cds-WP_010989024.1;Parent=gene-C9E94_RS15740;Dbxref=GenBank:WP_010989024.1;Name=WP_010989024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460657.1;locus_tag=C9E94_RS15740;product=hypothetical protein;protein_id=WP_010989024.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	61399	62772	.	+	.	ID=gene-C9E94_RS15745;Name=steC;gbkey=Gene;gene=steC;gene_biotype=protein_coding;locus_tag=C9E94_RS15745;old_locus_tag=C9E94_16125
NZ_PYJR01000105.1	Protein Homology	CDS	61399	62772	.	+	0	ID=cds-WP_080170150.1;Parent=gene-C9E94_RS15745;Dbxref=GenBank:WP_080170150.1;Name=WP_080170150.1;gbkey=CDS;gene=steC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460656.1;locus_tag=C9E94_RS15745;product=SPI-2 type III secretion system effector kinase SteC;protein_id=WP_080170150.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	63239	63946	.	+	.	ID=gene-C9E94_RS15750;Name=C9E94_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15750;old_locus_tag=C9E94_16130
NZ_PYJR01000105.1	Protein Homology	CDS	63239	63946	.	+	0	ID=cds-WP_001268395.1;Parent=gene-C9E94_RS15750;Dbxref=GenBank:WP_001268395.1;Name=WP_001268395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748430.1;locus_tag=C9E94_RS15750;product=EAL domain-containing protein;protein_id=WP_001268395.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	63962	64768	.	-	.	ID=gene-C9E94_RS15755;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=C9E94_RS15755;old_locus_tag=C9E94_16135
NZ_PYJR01000105.1	Protein Homology	CDS	63962	64768	.	-	0	ID=cds-WP_000230462.1;Parent=gene-C9E94_RS15755;Dbxref=GenBank:WP_000230462.1;Name=WP_000230462.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460654.1;locus_tag=C9E94_RS15755;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_000230462.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	64770	65762	.	-	.	ID=gene-C9E94_RS15760;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=C9E94_RS15760;old_locus_tag=C9E94_16140
NZ_PYJR01000105.1	Protein Homology	CDS	64770	65762	.	-	0	ID=cds-WP_001128869.1;Parent=gene-C9E94_RS15760;Dbxref=GenBank:WP_001128869.1;Name=WP_001128869.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460653.1;locus_tag=C9E94_RS15760;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_001128869.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	65762	66652	.	-	.	ID=gene-C9E94_RS15765;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=C9E94_RS15765;old_locus_tag=C9E94_16145
NZ_PYJR01000105.1	Protein Homology	CDS	65762	66652	.	-	0	ID=cds-WP_001146150.1;Parent=gene-C9E94_RS15765;Dbxref=GenBank:WP_001146150.1;Name=WP_001146150.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460652.1;locus_tag=C9E94_RS15765;product=peptide ABC transporter permease SapC;protein_id=WP_001146150.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	66639	67604	.	-	.	ID=gene-C9E94_RS15770;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=C9E94_RS15770;old_locus_tag=C9E94_16150
NZ_PYJR01000105.1	Protein Homology	CDS	66639	67604	.	-	0	ID=cds-WP_000583298.1;Parent=gene-C9E94_RS15770;Dbxref=GenBank:WP_000583298.1;Name=WP_000583298.1;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=C9E94_RS15770;product=peptide ABC transporter permease SapB;protein_id=WP_000583298.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	67601	69250	.	-	.	ID=gene-C9E94_RS15775;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=C9E94_RS15775;old_locus_tag=C9E94_16155
NZ_PYJR01000105.1	Protein Homology	CDS	67601	69250	.	-	0	ID=cds-WP_001241622.1;Parent=gene-C9E94_RS15775;Dbxref=GenBank:WP_001241622.1;Name=WP_001241622.1;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=C9E94_RS15775;product=peptide ABC transporter substrate-binding protein SapA;protein_id=WP_001241622.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	69362	70342	.	-	.	ID=gene-C9E94_RS15780;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=C9E94_RS15780;old_locus_tag=C9E94_16160
NZ_PYJR01000105.1	Protein Homology	CDS	69362	70342	.	-	0	ID=cds-WP_001747565.1;Parent=gene-C9E94_RS15780;Dbxref=GenBank:WP_001747565.1;Name=WP_001747565.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460649.1;locus_tag=C9E94_RS15780;product=phage shock protein operon transcriptional activator;protein_id=WP_001747565.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	70513	71181	.	+	.	ID=gene-C9E94_RS15785;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=C9E94_RS15785;old_locus_tag=C9E94_16165
NZ_PYJR01000105.1	Protein Homology	CDS	70513	71181	.	+	0	ID=cds-WP_000510996.1;Parent=gene-C9E94_RS15785;Dbxref=GenBank:WP_000510996.1;Name=WP_000510996.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460648.1;locus_tag=C9E94_RS15785;product=phage shock protein PspA;protein_id=WP_000510996.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	71241	71465	.	+	.	ID=gene-C9E94_RS15790;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=C9E94_RS15790;old_locus_tag=C9E94_16170
NZ_PYJR01000105.1	Protein Homology	CDS	71241	71465	.	+	0	ID=cds-WP_001274953.1;Parent=gene-C9E94_RS15790;Dbxref=GenBank:WP_001274953.1;Name=WP_001274953.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460647.1;locus_tag=C9E94_RS15790;product=envelope stress response membrane protein PspB;protein_id=WP_001274953.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	71465	71824	.	+	.	ID=gene-C9E94_RS15795;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=C9E94_RS15795;old_locus_tag=C9E94_16175
NZ_PYJR01000105.1	Protein Homology	CDS	71465	71824	.	+	0	ID=cds-WP_000508938.1;Parent=gene-C9E94_RS15795;Dbxref=GenBank:WP_000508938.1;Name=WP_000508938.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460646.1;locus_tag=C9E94_RS15795;product=envelope stress response membrane protein PspC;protein_id=WP_000508938.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	71847	72065	.	+	.	ID=gene-C9E94_RS15800;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=C9E94_RS15800;old_locus_tag=C9E94_16180
NZ_PYJR01000105.1	Protein Homology	CDS	71847	72065	.	+	0	ID=cds-WP_001097607.1;Parent=gene-C9E94_RS15800;Dbxref=GenBank:WP_001097607.1;Name=WP_001097607.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460645.1;locus_tag=C9E94_RS15800;product=phage shock protein PspD;protein_id=WP_001097607.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	72141	72455	.	+	.	ID=gene-C9E94_RS15805;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=C9E94_RS15805;old_locus_tag=C9E94_16185
NZ_PYJR01000105.1	Protein Homology	CDS	72141	72455	.	+	0	ID=cds-WP_000913430.1;Parent=gene-C9E94_RS15805;Dbxref=GenBank:WP_000913430.1;Name=WP_000913430.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460644.1;locus_tag=C9E94_RS15805;product=thiosulfate sulfurtransferase PspE;protein_id=WP_000913430.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	72604	74001	.	+	.	ID=gene-C9E94_RS15810;Name=C9E94_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15810;old_locus_tag=C9E94_16190
NZ_PYJR01000105.1	Protein Homology	CDS	72604	74001	.	+	0	ID=cds-WP_000825858.1;Parent=gene-C9E94_RS15810;Dbxref=GenBank:WP_000825858.1;Name=WP_000825858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=C9E94_RS15810;product=YcjX family protein;protein_id=WP_000825858.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	73998	75059	.	+	.	ID=gene-C9E94_RS15815;Name=C9E94_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15815;old_locus_tag=C9E94_16195
NZ_PYJR01000105.1	Protein Homology	CDS	73998	75059	.	+	0	ID=cds-WP_000003989.1;Parent=gene-C9E94_RS15815;Dbxref=GenBank:WP_000003989.1;Name=WP_000003989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460642.1;locus_tag=C9E94_RS15815;product=YcjF family protein;protein_id=WP_000003989.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	75207	76748	.	+	.	ID=gene-C9E94_RS15820;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=C9E94_RS15820;old_locus_tag=C9E94_16200
NZ_PYJR01000105.1	Protein Homology	CDS	75207	76748	.	+	0	ID=cds-WP_001235484.1;Parent=gene-C9E94_RS15820;Dbxref=GenBank:WP_001235484.1;Name=WP_001235484.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460641.1;locus_tag=C9E94_RS15820;product=transcriptional regulator TyrR;protein_id=WP_001235484.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	76838	77344	.	-	.	ID=gene-C9E94_RS15825;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=C9E94_RS15825;old_locus_tag=C9E94_16205
NZ_PYJR01000105.1	Protein Homology	CDS	76838	77344	.	-	0	ID=cds-WP_000084401.1;Parent=gene-C9E94_RS15825;Dbxref=GenBank:WP_000084401.1;Name=WP_000084401.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460640.1;locus_tag=C9E94_RS15825;product=thiol peroxidase;protein_id=WP_000084401.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	77460	78425	.	+	.	ID=gene-C9E94_RS15830;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=C9E94_RS15830;old_locus_tag=C9E94_16210
NZ_PYJR01000105.1	Protein Homology	CDS	77460	78425	.	+	0	ID=cds-WP_001258067.1;Parent=gene-C9E94_RS15830;Dbxref=GenBank:WP_001258067.1;Name=WP_001258067.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460639.1;locus_tag=C9E94_RS15830;product=L-Ala-D/L-Glu epimerase;protein_id=WP_001258067.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	78400	79128	.	-	.	ID=gene-C9E94_RS15835;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=C9E94_RS15835;old_locus_tag=C9E94_16215
NZ_PYJR01000105.1	Protein Homology	CDS	78400	79128	.	-	0	ID=cds-WP_000219102.1;Parent=gene-C9E94_RS15835;Dbxref=GenBank:WP_000219102.1;Name=WP_000219102.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460638.1;locus_tag=C9E94_RS15835;product=murein tripeptide amidase MpaA;protein_id=WP_000219102.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	79318	80931	.	+	.	ID=gene-C9E94_RS15840;Name=C9E94_RS15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15840;old_locus_tag=C9E94_16220
NZ_PYJR01000105.1	Protein Homology	CDS	79318	80931	.	+	0	ID=cds-WP_001216563.1;Parent=gene-C9E94_RS15840;Dbxref=GenBank:WP_001216563.1;Name=WP_001216563.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460637.1;locus_tag=C9E94_RS15840;product=peptide ABC transporter substrate-binding protein;protein_id=WP_001216563.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	81028	81957	.	-	.	ID=gene-C9E94_RS15845;Name=C9E94_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15845;old_locus_tag=C9E94_16225
NZ_PYJR01000105.1	Protein Homology	CDS	81028	81957	.	-	0	ID=cds-WP_023237702.1;Parent=gene-C9E94_RS15845;Dbxref=GenBank:WP_023237702.1;Name=WP_023237702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460636.1;locus_tag=C9E94_RS15845;product=aromatic alcohol reductase;protein_id=WP_023237702.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	82076	82981	.	+	.	ID=gene-C9E94_RS15850;Name=C9E94_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15850;old_locus_tag=C9E94_16230
NZ_PYJR01000105.1	Protein Homology	CDS	82076	82981	.	+	0	ID=cds-WP_094889284.1;Parent=gene-C9E94_RS15850;Dbxref=GenBank:WP_094889284.1;Name=WP_094889284.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460635.1;locus_tag=C9E94_RS15850;product=LysR family transcriptional regulator;protein_id=WP_094889284.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	83258	84127	.	+	.	ID=gene-C9E94_RS15855;Name=C9E94_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15855;old_locus_tag=C9E94_16235
NZ_PYJR01000105.1	Protein Homology	CDS	83258	84127	.	+	0	ID=cds-WP_023206477.1;Parent=gene-C9E94_RS15855;Dbxref=GenBank:WP_023206477.1;Name=WP_023206477.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460634.1;locus_tag=C9E94_RS15855;product=aldo/keto reductase;protein_id=WP_023206477.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	84218	84931	.	-	.	ID=gene-C9E94_RS15860;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=C9E94_RS15860;old_locus_tag=C9E94_16240
NZ_PYJR01000105.1	Protein Homology	CDS	84218	84931	.	-	0	ID=cds-WP_094889283.1;Parent=gene-C9E94_RS15860;Dbxref=GenBank:WP_094889283.1;Name=WP_094889283.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460633.1;locus_tag=C9E94_RS15860;product=SDR family oxidoreductase;protein_id=WP_094889283.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	85009	85599	.	+	.	ID=gene-C9E94_RS15865;Name=C9E94_RS15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15865;old_locus_tag=C9E94_16245
NZ_PYJR01000105.1	Protein Homology	CDS	85009	85599	.	+	0	ID=cds-WP_000208474.1;Parent=gene-C9E94_RS15865;Dbxref=GenBank:WP_000208474.1;Name=WP_000208474.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460632.1;locus_tag=C9E94_RS15865;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000208474.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	85728	85964	.	+	.	ID=gene-C9E94_RS15870;Name=C9E94_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15870;old_locus_tag=C9E94_16250
NZ_PYJR01000105.1	Protein Homology	CDS	85728	85964	.	+	0	ID=cds-WP_001168016.1;Parent=gene-C9E94_RS15870;Dbxref=GenBank:WP_001168016.1;Name=WP_001168016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168019.1;locus_tag=C9E94_RS15870;product=YgdI/YgdR family lipoprotein;protein_id=WP_001168016.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	86178	87287	.	-	.	ID=gene-C9E94_RS15875;Name=C9E94_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15875;old_locus_tag=C9E94_16255
NZ_PYJR01000105.1	Protein Homology	CDS	86178	87287	.	-	0	ID=cds-WP_094889282.1;Parent=gene-C9E94_RS15875;Dbxref=GenBank:WP_094889282.1;Name=WP_094889282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448089.1;locus_tag=C9E94_RS15875;product=hypothetical protein;protein_id=WP_094889282.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	87680	88537	.	-	.	ID=gene-C9E94_RS15880;Name=C9E94_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15880;old_locus_tag=C9E94_16260
NZ_PYJR01000105.1	Protein Homology	CDS	87680	88537	.	-	0	ID=cds-WP_094889281.1;Parent=gene-C9E94_RS15880;Dbxref=GenBank:WP_094889281.1;Name=WP_094889281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460629.1;locus_tag=C9E94_RS15880;product=GyrI-like domain-containing protein;protein_id=WP_094889281.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	88831	89676	.	+	.	ID=gene-C9E94_RS15890;Name=zirU;gbkey=Gene;gene=zirU;gene_biotype=protein_coding;locus_tag=C9E94_RS15890;old_locus_tag=C9E94_16265
NZ_PYJR01000105.1	Protein Homology	CDS	88831	89676	.	+	0	ID=cds-WP_094889280.1;Parent=gene-C9E94_RS15890;Dbxref=GenBank:WP_094889280.1;Name=WP_094889280.1;gbkey=CDS;gene=zirU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460628.1;locus_tag=C9E94_RS15890;product=two-partner-like secretion system exoprotein ZirU;protein_id=WP_094889280.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	89751	91733	.	+	.	ID=gene-C9E94_RS15895;Name=zirT;gbkey=Gene;gene=zirT;gene_biotype=protein_coding;locus_tag=C9E94_RS15895;old_locus_tag=C9E94_16270
NZ_PYJR01000105.1	Protein Homology	CDS	89751	91733	.	+	0	ID=cds-WP_135401127.1;Parent=gene-C9E94_RS15895;Dbxref=GenBank:WP_135401127.1;Name=WP_135401127.1;gbkey=CDS;gene=zirT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460627.1;locus_tag=C9E94_RS15895;product=two-partner secretion translocator ZirT;protein_id=WP_135401127.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	91754	92584	.	+	.	ID=gene-C9E94_RS15900;Name=zirS;gbkey=Gene;gene=zirS;gene_biotype=protein_coding;locus_tag=C9E94_RS15900;old_locus_tag=C9E94_16275
NZ_PYJR01000105.1	Protein Homology	CDS	91754	92584	.	+	0	ID=cds-WP_001242918.1;Parent=gene-C9E94_RS15900;Dbxref=GenBank:WP_001242918.1;Name=WP_001242918.1;gbkey=CDS;gene=zirS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460626.1;locus_tag=C9E94_RS15900;product=two-partner-like secretion system exoprotein ZirS;protein_id=WP_001242918.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	92683	93240	.	+	.	ID=gene-C9E94_RS15905;Name=C9E94_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15905;old_locus_tag=C9E94_16280
NZ_PYJR01000105.1	Protein Homology	CDS	92683	93240	.	+	0	ID=cds-WP_072104889.1;Parent=gene-C9E94_RS15905;Dbxref=GenBank:WP_072104889.1;Name=WP_072104889.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460625.1;locus_tag=C9E94_RS15905;product=redoxin family protein;protein_id=WP_072104889.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	93346	93684	.	-	.	ID=gene-C9E94_RS15910;Name=C9E94_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15910;old_locus_tag=C9E94_16285
NZ_PYJR01000105.1	Protein Homology	CDS	93346	93684	.	-	0	ID=cds-WP_000051812.1;Parent=gene-C9E94_RS15910;Dbxref=GenBank:WP_000051812.1;Name=WP_000051812.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051808.1;locus_tag=C9E94_RS15910;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_000051812.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	93712	94398	.	-	.	ID=gene-C9E94_RS15915;Name=C9E94_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15915;old_locus_tag=C9E94_16290
NZ_PYJR01000105.1	Protein Homology	CDS	93712	94398	.	-	0	ID=cds-WP_000097262.1;Parent=gene-C9E94_RS15915;Dbxref=GenBank:WP_000097262.1;Name=WP_000097262.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460624.1;locus_tag=C9E94_RS15915;product=B3/B4 domain-containing protein;protein_id=WP_000097262.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	94442	95044	.	+	.	ID=gene-C9E94_RS15920;Name=C9E94_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15920;old_locus_tag=C9E94_16295
NZ_PYJR01000105.1	Protein Homology	CDS	94442	95044	.	+	0	ID=cds-WP_000163372.1;Parent=gene-C9E94_RS15920;Dbxref=GenBank:WP_000163372.1;Name=WP_000163372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460623.1;locus_tag=C9E94_RS15920;product=helix-turn-helix domain-containing protein;protein_id=WP_000163372.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	95130	96161	.	-	.	ID=gene-C9E94_RS15925;Name=C9E94_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15925;old_locus_tag=C9E94_16300
NZ_PYJR01000105.1	Protein Homology	CDS	95130	96161	.	-	0	ID=cds-WP_023201113.1;Parent=gene-C9E94_RS15925;Dbxref=GenBank:WP_023201113.1;Name=WP_023201113.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460622.1;locus_tag=C9E94_RS15925;product=mechanosensitive ion channel family protein;protein_id=WP_023201113.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	96400	96654	.	+	.	ID=gene-C9E94_RS15930;Name=C9E94_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15930;old_locus_tag=C9E94_16305
NZ_PYJR01000105.1	Protein Homology	CDS	96400	96654	.	+	0	ID=cds-WP_000605645.1;Parent=gene-C9E94_RS15930;Dbxref=GenBank:WP_000605645.1;Name=WP_000605645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460621.1;locus_tag=C9E94_RS15930;product=DUF2534 family protein;protein_id=WP_000605645.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	96709	97656	.	-	.	ID=gene-C9E94_RS15935;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=C9E94_RS15935;old_locus_tag=C9E94_16310
NZ_PYJR01000105.1	Protein Homology	CDS	96709	97656	.	-	0	ID=cds-WP_001262138.1;Parent=gene-C9E94_RS15935;Dbxref=GenBank:WP_001262138.1;Name=WP_001262138.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460620.1;locus_tag=C9E94_RS15935;product=universal stress protein UspE;protein_id=WP_001262138.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	97807	98559	.	-	.	ID=gene-C9E94_RS15940;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=C9E94_RS15940;old_locus_tag=C9E94_16315
NZ_PYJR01000105.1	Protein Homology	CDS	97807	98559	.	-	0	ID=cds-WP_000611914.1;Parent=gene-C9E94_RS15940;Dbxref=GenBank:WP_000611914.1;Name=WP_000611914.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=C9E94_RS15940;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000611914.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	98755	99270	.	-	.	ID=gene-C9E94_RS15945;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=C9E94_RS15945;old_locus_tag=C9E94_16320
NZ_PYJR01000105.1	Protein Homology	CDS	98755	99270	.	-	0	ID=cds-WP_000945036.1;Parent=gene-C9E94_RS15945;Dbxref=GenBank:WP_000945036.1;Name=WP_000945036.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460618.1;locus_tag=C9E94_RS15945;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000945036.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	99528	100091	.	+	.	ID=gene-C9E94_RS15950;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=C9E94_RS15950;old_locus_tag=C9E94_16325
NZ_PYJR01000105.1	Protein Homology	CDS	99528	100091	.	+	0	ID=cds-WP_001046799.1;Parent=gene-C9E94_RS15950;Dbxref=GenBank:WP_001046799.1;Name=WP_001046799.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460617.1;locus_tag=C9E94_RS15950;product=DNA endonuclease SmrA;protein_id=WP_001046799.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	100502	101656	.	+	.	ID=gene-C9E94_RS15960;Name=C9E94_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15960;old_locus_tag=C9E94_16335
NZ_PYJR01000105.1	Protein Homology	CDS	100502	101656	.	+	0	ID=cds-WP_000945630.1;Parent=gene-C9E94_RS15960;Dbxref=GenBank:WP_000945630.1;Name=WP_000945630.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460616.1;locus_tag=C9E94_RS15960;product=methyl-accepting chemotaxis protein;protein_id=WP_000945630.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	101802	102785	.	+	.	ID=gene-C9E94_RS15965;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=C9E94_RS15965;old_locus_tag=C9E94_16340
NZ_PYJR01000105.1	Protein Homology	CDS	101802	102785	.	+	0	ID=cds-WP_000387374.1;Parent=gene-C9E94_RS15965;Dbxref=GenBank:WP_000387374.1;Name=WP_000387374.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460615.1;locus_tag=C9E94_RS15965;product=zinc transporter ZntB;protein_id=WP_000387374.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	103061	103243	.	+	.	ID=gene-C9E94_RS23920;Name=ynaL;gbkey=Gene;gene=ynaL;gene_biotype=protein_coding;locus_tag=C9E94_RS23920;old_locus_tag=C9E94_16345
NZ_PYJR01000105.1	Protein Homology	CDS	103061	103243	.	+	0	ID=cds-WP_001670836.1;Parent=gene-C9E94_RS23920;Dbxref=GenBank:WP_001670836.1;Name=WP_001670836.1;gbkey=CDS;gene=ynaL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_271267465.1;locus_tag=C9E94_RS23920;product=proline-rich small protein YnaL;protein_id=WP_001670836.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	103272	104645	.	+	.	ID=gene-C9E94_RS15975;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=C9E94_RS15975;old_locus_tag=C9E94_16350
NZ_PYJR01000105.1	Protein Homology	CDS	103272	104645	.	+	0	ID=cds-WP_000123685.1;Parent=gene-C9E94_RS15975;Dbxref=GenBank:WP_000123685.1;Name=WP_000123685.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=C9E94_RS15975;product=ATP-dependent RNA helicase DbpA;protein_id=WP_000123685.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	104689	105624	.	-	.	ID=gene-C9E94_RS15980;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=C9E94_RS15980;old_locus_tag=C9E94_16355
NZ_PYJR01000105.1	Protein Homology	CDS	104689	105624	.	-	0	ID=cds-WP_001156208.1;Parent=gene-C9E94_RS15980;Dbxref=GenBank:WP_001156208.1;Name=WP_001156208.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460613.1;locus_tag=C9E94_RS15980;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_001156208.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	pseudogene	105676	105879	.	-	.	ID=gene-C9E94_RS15985;Name=C9E94_RS15985;end_range=105879,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS15985;old_locus_tag=C9E94_16360;partial=true;pseudo=true
NZ_PYJR01000105.1	Protein Homology	CDS	105676	105879	.	-	0	ID=cds-C9E94_RS15985;Parent=gene-C9E94_RS15985;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=105879,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=C9E94_RS15985;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	105835	105987	.	+	.	ID=gene-C9E94_RS23810;Name=C9E94_RS23810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23810;old_locus_tag=C9E94_16365
NZ_PYJR01000105.1	Protein Homology	CDS	105835	105987	.	+	0	ID=cds-WP_000089153.1;Parent=gene-C9E94_RS23810;Dbxref=GenBank:WP_000089153.1;Name=WP_000089153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465579.1;locus_tag=C9E94_RS23810;product=hypothetical protein;protein_id=WP_000089153.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	105980	106318	.	+	.	ID=gene-C9E94_RS15995;Name=C9E94_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15995;old_locus_tag=C9E94_16370
NZ_PYJR01000105.1	Protein Homology	CDS	105980	106318	.	+	0	ID=cds-WP_000159242.1;Parent=gene-C9E94_RS15995;Dbxref=GenBank:WP_000159242.1;Name=WP_000159242.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460612.1;locus_tag=C9E94_RS15995;product=SMR family transporter;protein_id=WP_000159242.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	106368	106802	.	-	.	ID=gene-C9E94_RS16000;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=C9E94_RS16000;old_locus_tag=C9E94_16375
NZ_PYJR01000105.1	Protein Homology	CDS	106368	106802	.	-	0	ID=cds-WP_001082296.1;Parent=gene-C9E94_RS16000;Dbxref=GenBank:WP_001082296.1;Name=WP_001082296.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460611.1;locus_tag=C9E94_RS16000;product=universal stress protein UspF;protein_id=WP_001082296.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	107284	110808	.	-	.	ID=gene-C9E94_RS16005;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=C9E94_RS16005;old_locus_tag=C9E94_16385
NZ_PYJR01000105.1	Protein Homology	CDS	107284	110808	.	-	0	ID=cds-WP_001193248.1;Parent=gene-C9E94_RS16005;Dbxref=GenBank:WP_001193248.1;Name=WP_001193248.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460610.1;locus_tag=C9E94_RS16005;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_001193248.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	110869	111180	.	-	.	ID=gene-C9E94_RS16010;Name=C9E94_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16010;old_locus_tag=C9E94_16390
NZ_PYJR01000105.1	Protein Homology	CDS	110869	111180	.	-	0	ID=cds-WP_031603716.1;Parent=gene-C9E94_RS16010;Dbxref=GenBank:WP_031603716.1;Name=WP_031603716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460609.1;locus_tag=C9E94_RS16010;product=hypothetical protein;protein_id=WP_031603716.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	111084	111350	.	+	.	ID=gene-C9E94_RS16015;Name=C9E94_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16015;old_locus_tag=C9E94_16395
NZ_PYJR01000105.1	Protein Homology	CDS	111084	111350	.	+	0	ID=cds-WP_001200679.1;Parent=gene-C9E94_RS16015;Dbxref=GenBank:WP_001200679.1;Name=WP_001200679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=C9E94_RS16015;product=putative hemolysin;protein_id=WP_001200679.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	111394	111804	.	-	.	ID=gene-C9E94_RS16020;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=C9E94_RS16020;old_locus_tag=C9E94_16400
NZ_PYJR01000105.1	Protein Homology	CDS	111394	111804	.	-	0	ID=cds-WP_000725242.1;Parent=gene-C9E94_RS16020;Dbxref=GenBank:WP_000725242.1;Name=WP_000725242.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460607.1;locus_tag=C9E94_RS16020;product=heat shock protein HslJ;protein_id=WP_000725242.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	111915	112904	.	-	.	ID=gene-C9E94_RS16025;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=C9E94_RS16025;old_locus_tag=C9E94_16405
NZ_PYJR01000105.1	Protein Homology	CDS	111915	112904	.	-	0	ID=cds-WP_000762206.1;Parent=gene-C9E94_RS16025;Dbxref=GenBank:WP_000762206.1;Name=WP_000762206.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460606.1;locus_tag=C9E94_RS16025;product=D-lactate dehydrogenase;protein_id=WP_000762206.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	113144	115780	.	+	.	ID=gene-C9E94_RS16030;Name=C9E94_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16030;old_locus_tag=C9E94_16410
NZ_PYJR01000105.1	Protein Homology	CDS	113144	115780	.	+	0	ID=cds-WP_023993293.1;Parent=gene-C9E94_RS16030;Dbxref=GenBank:WP_023993293.1;Name=WP_023993293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460605.1;locus_tag=C9E94_RS16030;product=YdbH family protein;protein_id=WP_023993293.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	115780	115971	.	+	.	ID=gene-C9E94_RS16035;Name=C9E94_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16035;old_locus_tag=C9E94_16415
NZ_PYJR01000105.1	Protein Homology	CDS	115780	115971	.	+	0	ID=cds-WP_000784063.1;Parent=gene-C9E94_RS16035;Dbxref=GenBank:WP_000784063.1;Name=WP_000784063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460604.1;locus_tag=C9E94_RS16035;product=YnbE family lipoprotein;protein_id=WP_000784063.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	115979	116302	.	+	.	ID=gene-C9E94_RS16040;Name=C9E94_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16040;old_locus_tag=C9E94_16420
NZ_PYJR01000105.1	Protein Homology	CDS	115979	116302	.	+	0	ID=cds-WP_000760345.1;Parent=gene-C9E94_RS16040;Dbxref=GenBank:WP_000760345.1;Name=WP_000760345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460603.1;locus_tag=C9E94_RS16040;product=YdbL family protein;protein_id=WP_000760345.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	116445	116894	.	+	.	ID=gene-C9E94_RS16045;Name=C9E94_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16045;old_locus_tag=C9E94_16425
NZ_PYJR01000105.1	Protein Homology	CDS	116445	116894	.	+	0	ID=cds-WP_001518898.1;Parent=gene-C9E94_RS16045;Dbxref=GenBank:WP_001518898.1;Name=WP_001518898.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460602.1;locus_tag=C9E94_RS16045;product=GFA family protein;protein_id=WP_001518898.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	116891	117496	.	-	.	ID=gene-C9E94_RS16050;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=C9E94_RS16050;old_locus_tag=C9E94_16430
NZ_PYJR01000105.1	Protein Homology	CDS	116891	117496	.	-	0	ID=cds-WP_000048924.1;Parent=gene-C9E94_RS16050;Dbxref=GenBank:WP_000048924.1;Name=WP_000048924.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460601.1;locus_tag=C9E94_RS16050;product=FMN-dependent NADH-azoreductase;protein_id=WP_000048924.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	117697	121599	.	+	.	ID=gene-C9E94_RS16055;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=C9E94_RS16055;old_locus_tag=C9E94_16435
NZ_PYJR01000105.1	Protein Homology	CDS	117697	121599	.	+	0	ID=cds-WP_024133394.1;Parent=gene-C9E94_RS16055;Dbxref=GenBank:WP_024133394.1;Name=WP_024133394.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=C9E94_RS16055;product=ATP-dependent RNA helicase HrpA;protein_id=WP_024133394.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	121663	122463	.	+	.	ID=gene-C9E94_RS16060;Name=C9E94_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16060;old_locus_tag=C9E94_16440
NZ_PYJR01000105.1	Protein Homology	CDS	121663	122463	.	+	0	ID=cds-WP_001098498.1;Parent=gene-C9E94_RS16060;Dbxref=GenBank:WP_001098498.1;Name=WP_001098498.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460599.1;locus_tag=C9E94_RS16060;product=YdcF family protein;protein_id=WP_001098498.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	122580	123110	.	+	.	ID=gene-C9E94_RS16065;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=C9E94_RS16065;old_locus_tag=C9E94_16445
NZ_PYJR01000105.1	Protein Homology	CDS	122580	123110	.	+	0	ID=cds-WP_000527273.1;Parent=gene-C9E94_RS16065;Dbxref=GenBank:WP_000527273.1;Name=WP_000527273.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460598.1;locus_tag=C9E94_RS16065;product=cytochrome b561;protein_id=WP_000527273.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	123381	124043	.	-	.	ID=gene-C9E94_RS16070;Name=C9E94_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16070;old_locus_tag=C9E94_16450
NZ_PYJR01000105.1	Protein Homology	CDS	123381	124043	.	-	0	ID=cds-WP_001520112.1;Parent=gene-C9E94_RS16070;Dbxref=GenBank:WP_001520112.1;Name=WP_001520112.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551832.1;locus_tag=C9E94_RS16070;product=class I SAM-dependent methyltransferase;protein_id=WP_001520112.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	124507	126057	.	-	.	ID=gene-C9E94_RS16075;Name=C9E94_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16075;old_locus_tag=C9E94_16455
NZ_PYJR01000105.1	Protein Homology	CDS	124507	126057	.	-	0	ID=cds-WP_001520091.1;Parent=gene-C9E94_RS16075;Dbxref=GenBank:WP_001520091.1;Name=WP_001520091.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460596.1;locus_tag=C9E94_RS16075;product=glycosyltransferase family 39 protein;protein_id=WP_001520091.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	126194	126874	.	-	.	ID=gene-C9E94_RS16080;Name=C9E94_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16080;old_locus_tag=C9E94_16460
NZ_PYJR01000105.1	Protein Homology	CDS	126194	126874	.	-	0	ID=cds-WP_000560166.1;Parent=gene-C9E94_RS16080;Dbxref=GenBank:WP_000560166.1;Name=WP_000560166.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460595.1;locus_tag=C9E94_RS16080;product=amino acid ABC transporter permease;protein_id=WP_000560166.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	126871	127602	.	-	.	ID=gene-C9E94_RS16085;Name=C9E94_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16085;old_locus_tag=C9E94_16465
NZ_PYJR01000105.1	Protein Homology	CDS	126871	127602	.	-	0	ID=cds-WP_001196340.1;Parent=gene-C9E94_RS16085;Dbxref=GenBank:WP_001196340.1;Name=WP_001196340.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460594.1;locus_tag=C9E94_RS16085;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_001196340.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	127627	128274	.	-	.	ID=gene-C9E94_RS16090;Name=C9E94_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16090;old_locus_tag=C9E94_16470
NZ_PYJR01000105.1	Protein Homology	CDS	127627	128274	.	-	0	ID=cds-WP_000094446.1;Parent=gene-C9E94_RS16090;Dbxref=GenBank:WP_000094446.1;Name=WP_000094446.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460593.1;locus_tag=C9E94_RS16090;product=amino acid ABC transporter permease;protein_id=WP_000094446.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	128281	129042	.	-	.	ID=gene-C9E94_RS16095;Name=C9E94_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16095;old_locus_tag=C9E94_16475
NZ_PYJR01000105.1	Protein Homology	CDS	128281	129042	.	-	0	ID=cds-WP_000949370.1;Parent=gene-C9E94_RS16095;Dbxref=GenBank:WP_000949370.1;Name=WP_000949370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460592.1;locus_tag=C9E94_RS16095;product=transporter substrate-binding domain-containing protein;protein_id=WP_000949370.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	129949	130293	.	+	.	ID=gene-C9E94_RS16100;Name=C9E94_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16100;old_locus_tag=C9E94_16480
NZ_PYJR01000105.1	Protein Homology	CDS	129949	130293	.	+	0	ID=cds-WP_000281185.1;Parent=gene-C9E94_RS16100;Dbxref=GenBank:WP_000281185.1;Name=WP_000281185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460591.1;locus_tag=C9E94_RS16100;product=DUF1294 domain-containing protein;protein_id=WP_000281185.1;transl_table=11
NZ_PYJR01000105.1	RefSeq	gene	130414	131640	.	-	.	ID=gene-C9E94_RS16105;Name=sseJ;gbkey=Gene;gene=sseJ;gene_biotype=protein_coding;locus_tag=C9E94_RS16105;old_locus_tag=C9E94_16485
NZ_PYJR01000105.1	Protein Homology	CDS	130414	131640	.	-	0	ID=cds-WP_094889274.1;Parent=gene-C9E94_RS16105;Dbxref=GenBank:WP_094889274.1;Name=WP_094889274.1;gbkey=CDS;gene=sseJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460590.1;locus_tag=C9E94_RS16105;product=SPI-2 type III secretion system effector SseJ;protein_id=WP_094889274.1;transl_table=11
##sequence-region NZ_PYJR01000136.1 1 25829
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000136.1	RefSeq	region	1	25829	.	+	.	ID=NZ_PYJR01000136.1:1..25829;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000136.1	RefSeq	pseudogene	1	97	.	-	.	ID=gene-C9E94_RS22275;Name=C9E94_RS22275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS22275;old_locus_tag=C9E94_22850;partial=true;pseudo=true;start_range=.,1
NZ_PYJR01000136.1	Protein Homology	CDS	1	97	.	-	0	ID=cds-C9E94_RS22275;Parent=gene-C9E94_RS22275;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=C9E94_RS22275;partial=true;product=GntR family transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11
NZ_PYJR01000136.1	RefSeq	gene	147	1472	.	+	.	ID=gene-C9E94_RS22280;Name=C9E94_RS22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22280;old_locus_tag=C9E94_22855
NZ_PYJR01000136.1	Protein Homology	CDS	147	1472	.	+	0	ID=cds-WP_000098081.1;Parent=gene-C9E94_RS22280;Dbxref=GenBank:WP_000098081.1;Name=WP_000098081.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=C9E94_RS22280;product=MFS transporter;protein_id=WP_000098081.1;transl_table=11
NZ_PYJR01000136.1	RefSeq	gene	1487	2689	.	+	.	ID=gene-C9E94_RS22285;Name=C9E94_RS22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22285;old_locus_tag=C9E94_22860
NZ_PYJR01000136.1	Protein Homology	CDS	1487	2689	.	+	0	ID=cds-WP_000705581.1;Parent=gene-C9E94_RS22285;Dbxref=GenBank:WP_000705581.1;Name=WP_000705581.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461215.1;locus_tag=C9E94_RS22285;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_000705581.1;transl_table=11
NZ_PYJR01000136.1	RefSeq	gene	3099	5735	.	+	.	ID=gene-C9E94_RS22290;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=C9E94_RS22290;old_locus_tag=C9E94_22870
NZ_PYJR01000136.1	Protein Homology	CDS	3099	5735	.	+	0	ID=cds-WP_001281271.1;Parent=gene-C9E94_RS22290;Dbxref=GenBank:WP_001281271.1;Name=WP_001281271.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=C9E94_RS22290;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_001281271.1;transl_table=11
NZ_PYJR01000136.1	RefSeq	gene	5853	8699	.	+	.	ID=gene-C9E94_RS22295;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=C9E94_RS22295;old_locus_tag=C9E94_22875
NZ_PYJR01000136.1	Protein Homology	CDS	5853	8699	.	+	0	ID=cds-WP_135401234.1;Parent=gene-C9E94_RS22295;Dbxref=GenBank:WP_135401234.1;Name=WP_135401234.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461213.1;locus_tag=C9E94_RS22295;product=two-component system sensor histidine kinase RcsC;protein_id=WP_135401234.1;transl_table=11
NZ_PYJR01000136.1	RefSeq	gene	8802	9452	.	-	.	ID=gene-C9E94_RS22300;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=C9E94_RS22300;old_locus_tag=C9E94_22880
NZ_PYJR01000136.1	Protein Homology	CDS	8802	9452	.	-	0	ID=cds-WP_001061919.1;Parent=gene-C9E94_RS22300;Dbxref=GenBank:WP_001061919.1;Name=WP_001061919.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461212.1;locus_tag=C9E94_RS22300;product=response regulator transcription factor RcsB;protein_id=WP_001061919.1;transl_table=11
NZ_PYJR01000136.1	RefSeq	gene	9469	12138	.	-	.	ID=gene-C9E94_RS22305;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=C9E94_RS22305;old_locus_tag=C9E94_22885
NZ_PYJR01000136.1	Protein Homology	CDS	9469	12138	.	-	0	ID=cds-WP_024150866.1;Parent=gene-C9E94_RS22305;Dbxref=GenBank:WP_024150866.1;Name=WP_024150866.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=C9E94_RS22305;product=phosphotransferase RcsD;protein_id=WP_024150866.1;transl_table=11
NZ_PYJR01000136.1	RefSeq	gene	12867	14003	.	+	.	ID=gene-C9E94_RS22310;Name=C9E94_RS22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22310;old_locus_tag=C9E94_22895
NZ_PYJR01000136.1	Protein Homology	CDS	12867	14003	.	+	0	ID=cds-WP_000865526.1;Parent=gene-C9E94_RS22310;Dbxref=GenBank:WP_000865526.1;Name=WP_000865526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461210.1;locus_tag=C9E94_RS22310;product=porin OmpC;protein_id=WP_000865526.1;transl_table=11
NZ_PYJR01000136.1	RefSeq	gene	14118	15170	.	+	.	ID=gene-C9E94_RS22315;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=C9E94_RS22315;old_locus_tag=C9E94_22900
NZ_PYJR01000136.1	Protein Homology	CDS	14118	15170	.	+	0	ID=cds-WP_135401235.1;Parent=gene-C9E94_RS22315;Dbxref=GenBank:WP_135401235.1;Name=WP_135401235.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461209.1;locus_tag=C9E94_RS22315;product=FAD:protein FMN transferase ApbE;protein_id=WP_135401235.1;transl_table=11
NZ_PYJR01000136.1	RefSeq	gene	15251	16312	.	+	.	ID=gene-C9E94_RS22320;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=C9E94_RS22320;old_locus_tag=C9E94_22905
NZ_PYJR01000136.1	Protein Homology	CDS	15251	16312	.	+	0	ID=cds-WP_135401236.1;Parent=gene-C9E94_RS22320;Dbxref=GenBank:WP_135401236.1;Name=WP_135401236.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461208.1;locus_tag=C9E94_RS22320;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_135401236.1;transl_table=11
NZ_PYJR01000136.1	RefSeq	gene	16315	16965	.	+	.	ID=gene-C9E94_RS22325;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=C9E94_RS22325;old_locus_tag=C9E94_22910
NZ_PYJR01000136.1	Protein Homology	CDS	16315	16965	.	+	0	ID=cds-WP_135401237.1;Parent=gene-C9E94_RS22325;Dbxref=GenBank:WP_135401237.1;Name=WP_135401237.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461207.1;locus_tag=C9E94_RS22325;product=DNA oxidative demethylase AlkB;protein_id=WP_135401237.1;transl_table=11
NZ_PYJR01000136.1	RefSeq	gene	17041	18684	.	+	.	ID=gene-C9E94_RS22330;Name=C9E94_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22330;old_locus_tag=C9E94_22915
NZ_PYJR01000136.1	Protein Homology	CDS	17041	18684	.	+	0	ID=cds-WP_000421584.1;Parent=gene-C9E94_RS22330;Dbxref=GenBank:WP_000421584.1;Name=WP_000421584.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461206.1;locus_tag=C9E94_RS22330;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_000421584.1;transl_table=11
NZ_PYJR01000136.1	RefSeq	gene	18884	19378	.	-	.	ID=gene-C9E94_RS22335;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=C9E94_RS22335;old_locus_tag=C9E94_22920
NZ_PYJR01000136.1	Protein Homology	CDS	18884	19378	.	-	0	ID=cds-WP_021000536.1;Parent=gene-C9E94_RS22335;Dbxref=GenBank:WP_021000536.1;Name=WP_021000536.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461205.1;locus_tag=C9E94_RS22335;product=serine protease inhibitor ecotin;protein_id=WP_021000536.1;transl_table=11
NZ_PYJR01000136.1	RefSeq	gene	19792	20283	.	+	.	ID=gene-C9E94_RS22340;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=C9E94_RS22340;old_locus_tag=C9E94_22925
NZ_PYJR01000136.1	Protein Homology	CDS	19792	20283	.	+	0	ID=cds-WP_000228069.1;Parent=gene-C9E94_RS22340;Dbxref=GenBank:WP_000228069.1;Name=WP_000228069.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461204.1;locus_tag=C9E94_RS22340;product=ferredoxin-type protein NapF;protein_id=WP_000228069.1;transl_table=11
NZ_PYJR01000136.1	RefSeq	gene	20273	20536	.	+	.	ID=gene-C9E94_RS22345;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=C9E94_RS22345;old_locus_tag=C9E94_22930
NZ_PYJR01000136.1	Protein Homology	CDS	20273	20536	.	+	0	ID=cds-WP_001260058.1;Parent=gene-C9E94_RS22345;Dbxref=GenBank:WP_001260058.1;Name=WP_001260058.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461203.1;locus_tag=C9E94_RS22345;product=chaperone NapD;protein_id=WP_001260058.1;transl_table=11
NZ_PYJR01000136.1	RefSeq	gene	20533	23019	.	+	.	ID=gene-C9E94_RS22350;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=C9E94_RS22350;old_locus_tag=C9E94_22935
NZ_PYJR01000136.1	Protein Homology	CDS	20533	23019	.	+	0	ID=cds-WP_000778097.1;Parent=gene-C9E94_RS22350;Dbxref=GenBank:WP_000778097.1;Name=WP_000778097.1;Ontology_term=GO:0008940,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;gene=napA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461202.1;locus_tag=C9E94_RS22350;product=nitrate reductase catalytic subunit NapA;protein_id=WP_000778097.1;transl_table=11
NZ_PYJR01000136.1	RefSeq	gene	23026	23721	.	+	.	ID=gene-C9E94_RS22355;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=C9E94_RS22355;old_locus_tag=C9E94_22940
NZ_PYJR01000136.1	Protein Homology	CDS	23026	23721	.	+	0	ID=cds-WP_000091673.1;Parent=gene-C9E94_RS22355;Dbxref=GenBank:WP_000091673.1;Name=WP_000091673.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461201.1;locus_tag=C9E94_RS22355;product=ferredoxin-type protein NapG;protein_id=WP_000091673.1;transl_table=11
NZ_PYJR01000136.1	RefSeq	gene	23708	24577	.	+	.	ID=gene-C9E94_RS22360;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=C9E94_RS22360;old_locus_tag=C9E94_22945
NZ_PYJR01000136.1	Protein Homology	CDS	23708	24577	.	+	0	ID=cds-WP_000013482.1;Parent=gene-C9E94_RS22360;Dbxref=GenBank:WP_000013482.1;Name=WP_000013482.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461200.1;locus_tag=C9E94_RS22360;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_000013482.1;transl_table=11
NZ_PYJR01000136.1	RefSeq	gene	24693	25142	.	+	.	ID=gene-C9E94_RS22365;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=C9E94_RS22365;old_locus_tag=C9E94_22955
NZ_PYJR01000136.1	Protein Homology	CDS	24693	25142	.	+	0	ID=cds-WP_000835182.1;Parent=gene-C9E94_RS22365;Dbxref=GenBank:WP_000835182.1;Name=WP_000835182.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461199.1;locus_tag=C9E94_RS22365;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_000835182.1;transl_table=11
NZ_PYJR01000136.1	RefSeq	gene	25152	25754	.	+	.	ID=gene-C9E94_RS22370;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=C9E94_RS22370;old_locus_tag=C9E94_22960
NZ_PYJR01000136.1	Protein Homology	CDS	25152	25754	.	+	0	ID=cds-WP_000431778.1;Parent=gene-C9E94_RS22370;Dbxref=GenBank:WP_000431778.1;Name=WP_000431778.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461198.1;locus_tag=C9E94_RS22370;product=cytochrome c-type protein NapC;protein_id=WP_000431778.1;transl_table=11
##sequence-region NZ_PYJR01000103.1 1 25246
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000103.1	RefSeq	region	1	25246	.	+	.	ID=NZ_PYJR01000103.1:1..25246;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000103.1	RefSeq	gene	174	656	.	-	.	ID=gene-C9E94_RS15265;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=C9E94_RS15265;old_locus_tag=C9E94_15645
NZ_PYJR01000103.1	Protein Homology	CDS	174	656	.	-	0	ID=cds-WP_001518569.1;Parent=gene-C9E94_RS15265;Dbxref=GenBank:WP_001518569.1;Name=WP_001518569.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461618.1;locus_tag=C9E94_RS15265;product=SsrA-binding protein SmpB;protein_id=WP_001518569.1;transl_table=11
NZ_PYJR01000103.1	RefSeq	gene	845	1282	.	+	.	ID=gene-C9E94_RS15270;Name=C9E94_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15270;old_locus_tag=C9E94_15650
NZ_PYJR01000103.1	Protein Homology	CDS	845	1282	.	+	0	ID=cds-WP_001537508.1;Parent=gene-C9E94_RS15270;Dbxref=GenBank:WP_001537508.1;Name=WP_001537508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543334.1;locus_tag=C9E94_RS15270;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_001537508.1;transl_table=11
NZ_PYJR01000103.1	RefSeq	gene	1272	1562	.	+	.	ID=gene-C9E94_RS15275;Name=C9E94_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15275;old_locus_tag=C9E94_15655
NZ_PYJR01000103.1	Protein Homology	CDS	1272	1562	.	+	0	ID=cds-WP_001112990.1;Parent=gene-C9E94_RS15275;Dbxref=GenBank:WP_001112990.1;Name=WP_001112990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461616.1;locus_tag=C9E94_RS15275;product=RnfH family protein;protein_id=WP_001112990.1;transl_table=11
NZ_PYJR01000103.1	RefSeq	gene	1728	2066	.	-	.	ID=gene-C9E94_RS15280;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=C9E94_RS15280;old_locus_tag=C9E94_15660
NZ_PYJR01000103.1	Protein Homology	CDS	1728	2066	.	-	0	ID=cds-WP_001203445.1;Parent=gene-C9E94_RS15280;Dbxref=GenBank:WP_001203445.1;Name=WP_001203445.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461615.1;locus_tag=C9E94_RS15280;product=outer membrane protein assembly factor BamE;protein_id=WP_001203445.1;transl_table=11
NZ_PYJR01000103.1	RefSeq	gene	2215	3876	.	-	.	ID=gene-C9E94_RS15285;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=C9E94_RS15285;old_locus_tag=C9E94_15665
NZ_PYJR01000103.1	Protein Homology	CDS	2215	3876	.	-	0	ID=cds-WP_135401119.1;Parent=gene-C9E94_RS15285;Dbxref=GenBank:WP_135401119.1;Name=WP_135401119.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461614.1;locus_tag=C9E94_RS15285;product=DNA repair protein RecN;protein_id=WP_135401119.1;transl_table=11
NZ_PYJR01000103.1	RefSeq	gene	3962	4840	.	-	.	ID=gene-C9E94_RS15290;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=C9E94_RS15290;old_locus_tag=C9E94_15670
NZ_PYJR01000103.1	Protein Homology	CDS	3962	4840	.	-	0	ID=cds-WP_001525081.1;Parent=gene-C9E94_RS15290;Dbxref=GenBank:WP_001525081.1;Name=WP_001525081.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=C9E94_RS15290;product=NAD(+) kinase;protein_id=WP_001525081.1;transl_table=11
NZ_PYJR01000103.1	RefSeq	gene	4964	5554	.	+	.	ID=gene-C9E94_RS15300;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=C9E94_RS15300;old_locus_tag=C9E94_15680
NZ_PYJR01000103.1	Protein Homology	CDS	4964	5554	.	+	0	ID=cds-WP_001518875.1;Parent=gene-C9E94_RS15300;Dbxref=GenBank:WP_001518875.1;Name=WP_001518875.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461611.1;locus_tag=C9E94_RS15300;product=nucleotide exchange factor GrpE;protein_id=WP_001518875.1;transl_table=11
NZ_PYJR01000103.1	RefSeq	gene	5589	6194	.	-	.	ID=gene-C9E94_RS15305;Name=C9E94_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15305;old_locus_tag=C9E94_15685
NZ_PYJR01000103.1	Protein Homology	CDS	5589	6194	.	-	0	ID=cds-WP_001287923.1;Parent=gene-C9E94_RS15305;Dbxref=GenBank:WP_001287923.1;Name=WP_001287923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461610.1;locus_tag=C9E94_RS15305;product=DUF6630 family protein;protein_id=WP_001287923.1;transl_table=11
NZ_PYJR01000103.1	RefSeq	gene	6314	7600	.	-	.	ID=gene-C9E94_RS15310;Name=C9E94_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15310;old_locus_tag=C9E94_15690
NZ_PYJR01000103.1	Protein Homology	CDS	6314	7600	.	-	0	ID=cds-WP_127172650.1;Parent=gene-C9E94_RS15310;Dbxref=GenBank:WP_127172650.1;Name=WP_127172650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=C9E94_RS15310;product=HlyC/CorC family transporter;protein_id=WP_127172650.1;transl_table=11
NZ_PYJR01000103.1	RefSeq	gene	7620	8411	.	-	.	ID=gene-C9E94_RS15315;Name=C9E94_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15315;old_locus_tag=C9E94_15695
NZ_PYJR01000103.1	Protein Homology	CDS	7620	8411	.	-	0	ID=cds-WP_001537507.1;Parent=gene-C9E94_RS15315;Dbxref=GenBank:WP_001537507.1;Name=WP_001537507.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461608.1;locus_tag=C9E94_RS15315;product=cytochrome C assembly family protein;protein_id=WP_001537507.1;transl_table=11
NZ_PYJR01000103.1	RefSeq	gene	8577	9938	.	+	.	ID=gene-C9E94_RS15325;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=C9E94_RS15325;old_locus_tag=C9E94_15705
NZ_PYJR01000103.1	Protein Homology	CDS	8577	9938	.	+	0	ID=cds-WP_000460052.1;Parent=gene-C9E94_RS15325;Dbxref=GenBank:WP_000460052.1;Name=WP_000460052.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=C9E94_RS15325;product=signal recognition particle protein;protein_id=WP_000460052.1;transl_table=11
NZ_PYJR01000103.1	RefSeq	gene	10282	10530	.	+	.	ID=gene-C9E94_RS15330;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=C9E94_RS15330;old_locus_tag=C9E94_15710
NZ_PYJR01000103.1	Protein Homology	CDS	10282	10530	.	+	0	ID=cds-WP_000256453.1;Parent=gene-C9E94_RS15330;Dbxref=GenBank:WP_000256453.1;Name=WP_000256453.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=C9E94_RS15330;product=30S ribosomal protein S16;protein_id=WP_000256453.1;transl_table=11
NZ_PYJR01000103.1	RefSeq	gene	10549	11097	.	+	.	ID=gene-C9E94_RS15335;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=C9E94_RS15335;old_locus_tag=C9E94_15715
NZ_PYJR01000103.1	Protein Homology	CDS	10549	11097	.	+	0	ID=cds-WP_000043266.1;Parent=gene-C9E94_RS15335;Dbxref=GenBank:WP_000043266.1;Name=WP_000043266.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=C9E94_RS15335;product=ribosome maturation factor RimM;protein_id=WP_000043266.1;transl_table=11
NZ_PYJR01000103.1	RefSeq	gene	11142	11909	.	+	.	ID=gene-C9E94_RS15340;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=C9E94_RS15340;old_locus_tag=C9E94_15720
NZ_PYJR01000103.1	Protein Homology	CDS	11142	11909	.	+	0	ID=cds-WP_000469813.1;Parent=gene-C9E94_RS15340;Dbxref=GenBank:WP_000469813.1;Name=WP_000469813.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461604.1;locus_tag=C9E94_RS15340;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000469813.1;transl_table=11
NZ_PYJR01000103.1	RefSeq	gene	11950	12297	.	+	.	ID=gene-C9E94_RS15345;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=C9E94_RS15345;old_locus_tag=C9E94_15725
NZ_PYJR01000103.1	Protein Homology	CDS	11950	12297	.	+	0	ID=cds-WP_000065257.1;Parent=gene-C9E94_RS15345;Dbxref=GenBank:WP_000065257.1;Name=WP_000065257.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=C9E94_RS15345;product=50S ribosomal protein L19;protein_id=WP_000065257.1;transl_table=11
NZ_PYJR01000103.1	RefSeq	gene	12454	13674	.	-	.	ID=gene-C9E94_RS15350;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=C9E94_RS15350;old_locus_tag=C9E94_15730
NZ_PYJR01000103.1	Protein Homology	CDS	12454	13674	.	-	0	ID=cds-WP_001030978.1;Parent=gene-C9E94_RS15350;Dbxref=GenBank:WP_001030978.1;Name=WP_001030978.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461602.1;locus_tag=C9E94_RS15350;product=diguanylate cyclase DgcN;protein_id=WP_001030978.1;transl_table=11
NZ_PYJR01000103.1	RefSeq	gene	13667	14185	.	-	.	ID=gene-C9E94_RS15355;Name=C9E94_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15355;old_locus_tag=C9E94_15735
NZ_PYJR01000103.1	Protein Homology	CDS	13667	14185	.	-	0	ID=cds-WP_001212375.1;Parent=gene-C9E94_RS15355;Dbxref=GenBank:WP_001212375.1;Name=WP_001212375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461601.1;locus_tag=C9E94_RS15355;product=YfiR family protein;protein_id=WP_001212375.1;transl_table=11
NZ_PYJR01000103.1	RefSeq	gene	14625	15695	.	+	.	ID=gene-C9E94_RS15360;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=C9E94_RS15360;old_locus_tag=C9E94_15740
NZ_PYJR01000103.1	Protein Homology	CDS	14625	15695	.	+	0	ID=cds-WP_001168062.1;Parent=gene-C9E94_RS15360;Dbxref=GenBank:WP_001168062.1;Name=WP_001168062.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461600.1;locus_tag=C9E94_RS15360;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_001168062.1;transl_table=11
NZ_PYJR01000103.1	RefSeq	gene	15705	16826	.	+	.	ID=gene-C9E94_RS15365;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=C9E94_RS15365;old_locus_tag=C9E94_15745
NZ_PYJR01000103.1	Protein Homology	CDS	15705	16826	.	+	0	ID=cds-WP_000225188.1;Parent=gene-C9E94_RS15365;Dbxref=GenBank:WP_000225188.1;Name=WP_000225188.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461599.1;locus_tag=C9E94_RS15365;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_000225188.1;transl_table=11
NZ_PYJR01000103.1	RefSeq	gene	16884	17792	.	+	.	ID=gene-C9E94_RS15370;Name=C9E94_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15370;old_locus_tag=C9E94_15750
NZ_PYJR01000103.1	Protein Homology	CDS	16884	17792	.	+	0	ID=cds-WP_000210984.1;Parent=gene-C9E94_RS15370;Dbxref=GenBank:WP_000210984.1;Name=WP_000210984.1;Ontology_term=GO:0005509,GO:0016787,GO:0046872;gbkey=CDS;go_function=calcium ion binding|0005509||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461598.1;locus_tag=C9E94_RS15370;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_000210984.1;transl_table=11
NZ_PYJR01000103.1	RefSeq	gene	17753	18913	.	-	.	ID=gene-C9E94_RS15375;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=C9E94_RS15375;old_locus_tag=C9E94_15755
NZ_PYJR01000103.1	Protein Homology	CDS	17753	18913	.	-	0	ID=cds-WP_000200077.1;Parent=gene-C9E94_RS15375;Dbxref=GenBank:WP_000200077.1;Name=WP_000200077.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461597.1;locus_tag=C9E94_RS15375;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_000200077.1;transl_table=11
NZ_PYJR01000103.1	cmsearch	sequence_feature	18936	19061	.	-	.	ID=id-NZ_PYJR01000103.1:18936..19061;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PYJR01000103.1	RefSeq	gene	19013	19060	.	-	.	ID=gene-C9E94_RS15380;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=C9E94_RS15380;old_locus_tag=C9E94_15760
NZ_PYJR01000103.1	Protein Homology	CDS	19013	19060	.	-	0	ID=cds-WP_010989056.1;Parent=gene-C9E94_RS15380;Dbxref=GenBank:WP_010989056.1;Name=WP_010989056.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449055.1;locus_tag=C9E94_RS15380;product=pheA operon leader peptide PheL;protein_id=WP_010989056.1;transl_table=11
NZ_PYJR01000103.1	RefSeq	gene	19164	19502	.	-	.	ID=gene-C9E94_RS15385;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=C9E94_RS15385;old_locus_tag=C9E94_15765
NZ_PYJR01000103.1	Protein Homology	CDS	19164	19502	.	-	0	ID=cds-WP_000178449.1;Parent=gene-C9E94_RS15385;Dbxref=GenBank:WP_000178449.1;Name=WP_000178449.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461595.1;locus_tag=C9E94_RS15385;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_000178449.1;transl_table=11
NZ_PYJR01000103.1	RefSeq	gene	19774	20511	.	-	.	ID=gene-C9E94_RS15395;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=C9E94_RS15395;old_locus_tag=C9E94_15770
NZ_PYJR01000103.1	Protein Homology	CDS	19774	20511	.	-	0	ID=cds-WP_000197660.1;Parent=gene-C9E94_RS15395;Dbxref=GenBank:WP_000197660.1;Name=WP_000197660.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461594.1;locus_tag=C9E94_RS15395;product=outer membrane protein assembly factor BamD;protein_id=WP_000197660.1;transl_table=11
NZ_PYJR01000103.1	RefSeq	gene	20643	21623	.	+	.	ID=gene-C9E94_RS15400;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=C9E94_RS15400;old_locus_tag=C9E94_15775
NZ_PYJR01000103.1	Protein Homology	CDS	20643	21623	.	+	0	ID=cds-WP_000079130.1;Parent=gene-C9E94_RS15400;Dbxref=GenBank:WP_000079130.1;Name=WP_000079130.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=C9E94_RS15400;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_000079130.1;transl_table=11
NZ_PYJR01000103.1	RefSeq	gene	21620	22351	.	+	.	ID=gene-C9E94_RS15405;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=C9E94_RS15405;old_locus_tag=C9E94_15780
NZ_PYJR01000103.1	Protein Homology	CDS	21620	22351	.	+	0	ID=cds-WP_000992634.1;Parent=gene-C9E94_RS15405;Dbxref=GenBank:WP_000992634.1;Name=WP_000992634.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461592.1;locus_tag=C9E94_RS15405;product=purine nucleoside phosphorylase YfiH;protein_id=WP_000992634.1;transl_table=11
NZ_PYJR01000103.1	RefSeq	gene	22481	25054	.	+	.	ID=gene-C9E94_RS15410;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=C9E94_RS15410;old_locus_tag=C9E94_15785
NZ_PYJR01000103.1	Protein Homology	CDS	22481	25054	.	+	0	ID=cds-WP_001235092.1;Parent=gene-C9E94_RS15410;Dbxref=GenBank:WP_001235092.1;Name=WP_001235092.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=C9E94_RS15410;product=ATP-dependent chaperone ClpB;protein_id=WP_001235092.1;transl_table=11
##sequence-region NZ_PYJR01000082.1 1 23822
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000082.1	RefSeq	region	1	23822	.	+	.	ID=NZ_PYJR01000082.1:1..23822;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000082.1	RefSeq	gene	1	938	.	-	.	ID=gene-C9E94_RS10710;Name=C9E94_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10710;old_locus_tag=C9E94_10940;partial=true;start_range=.,1
NZ_PYJR01000082.1	Protein Homology	CDS	1	938	.	-	0	ID=cds-WP_167853647.1;Parent=gene-C9E94_RS10710;Dbxref=GenBank:WP_167853647.1;Name=WP_167853647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015847871.1;locus_tag=C9E94_RS10710;partial=true;product=AAA family ATPase;protein_id=WP_167853647.1;start_range=.,1;transl_table=11
NZ_PYJR01000082.1	RefSeq	gene	1178	1570	.	-	.	ID=gene-C9E94_RS10715;Name=C9E94_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10715;old_locus_tag=C9E94_10945
NZ_PYJR01000082.1	Protein Homology	CDS	1178	1570	.	-	0	ID=cds-WP_135400994.1;Parent=gene-C9E94_RS10715;Dbxref=GenBank:WP_135400994.1;Name=WP_135400994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000984474.1;locus_tag=C9E94_RS10715;product=hypothetical protein;protein_id=WP_135400994.1;transl_table=11
NZ_PYJR01000082.1	RefSeq	gene	1567	4338	.	-	.	ID=gene-C9E94_RS10720;Name=C9E94_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10720;old_locus_tag=C9E94_10950
NZ_PYJR01000082.1	Protein Homology	CDS	1567	4338	.	-	0	ID=cds-WP_167853648.1;Parent=gene-C9E94_RS10720;Dbxref=GenBank:WP_167853648.1;Name=WP_167853648.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000492036.1;locus_tag=C9E94_RS10720;product=conjugative transfer ATPase;protein_id=WP_167853648.1;transl_table=11
NZ_PYJR01000082.1	RefSeq	gene	4335	4736	.	-	.	ID=gene-C9E94_RS10725;Name=C9E94_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10725;old_locus_tag=C9E94_10955
NZ_PYJR01000082.1	Protein Homology	CDS	4335	4736	.	-	0	ID=cds-WP_135400996.1;Parent=gene-C9E94_RS10725;Dbxref=GenBank:WP_135400996.1;Name=WP_135400996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000679471.1;locus_tag=C9E94_RS10725;product=TIGR03751 family conjugal transfer lipoprotein;protein_id=WP_135400996.1;transl_table=11
NZ_PYJR01000082.1	RefSeq	gene	4746	6212	.	-	.	ID=gene-C9E94_RS10730;Name=C9E94_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10730;old_locus_tag=C9E94_10960
NZ_PYJR01000082.1	Protein Homology	CDS	4746	6212	.	-	0	ID=cds-WP_135400997.1;Parent=gene-C9E94_RS10730;Dbxref=GenBank:WP_135400997.1;Name=WP_135400997.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004150878.1;locus_tag=C9E94_RS10730;product=TIGR03752 family integrating conjugative element protein;protein_id=WP_135400997.1;transl_table=11
NZ_PYJR01000082.1	RefSeq	gene	6202	7077	.	-	.	ID=gene-C9E94_RS10735;Name=C9E94_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10735;old_locus_tag=C9E94_10965
NZ_PYJR01000082.1	Protein Homology	CDS	6202	7077	.	-	0	ID=cds-WP_135400998.1;Parent=gene-C9E94_RS10735;Dbxref=GenBank:WP_135400998.1;Name=WP_135400998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000058700.1;locus_tag=C9E94_RS10735;product=TIGR03749 family integrating conjugative element protein;protein_id=WP_135400998.1;transl_table=11
NZ_PYJR01000082.1	RefSeq	gene	7077	7733	.	-	.	ID=gene-C9E94_RS10740;Name=C9E94_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10740;old_locus_tag=C9E94_10970
NZ_PYJR01000082.1	Protein Homology	CDS	7077	7733	.	-	0	ID=cds-WP_135400999.1;Parent=gene-C9E94_RS10740;Dbxref=GenBank:WP_135400999.1;Name=WP_135400999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000086096.1;locus_tag=C9E94_RS10740;product=PFL_4703 family integrating conjugative element protein;protein_id=WP_135400999.1;transl_table=11
NZ_PYJR01000082.1	RefSeq	gene	7726	8106	.	-	.	ID=gene-C9E94_RS10745;Name=C9E94_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10745;old_locus_tag=C9E94_10975
NZ_PYJR01000082.1	Protein Homology	CDS	7726	8106	.	-	0	ID=cds-WP_135401000.1;Parent=gene-C9E94_RS10745;Dbxref=GenBank:WP_135401000.1;Name=WP_135401000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000190871.1;locus_tag=C9E94_RS10745;product=TIGR03750 family conjugal transfer protein;protein_id=WP_135401000.1;transl_table=11
NZ_PYJR01000082.1	RefSeq	gene	8119	8493	.	-	.	ID=gene-C9E94_RS10750;Name=C9E94_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10750;old_locus_tag=C9E94_10980
NZ_PYJR01000082.1	Protein Homology	CDS	8119	8493	.	-	0	ID=cds-WP_058331689.1;Parent=gene-C9E94_RS10750;Dbxref=GenBank:WP_058331689.1;Name=WP_058331689.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004856732.1;locus_tag=C9E94_RS10750;product=TIGR03745 family integrating conjugative element membrane protein;protein_id=WP_058331689.1;transl_table=11
NZ_PYJR01000082.1	RefSeq	gene	8522	8758	.	-	.	ID=gene-C9E94_RS10755;Name=C9E94_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10755;old_locus_tag=C9E94_10985
NZ_PYJR01000082.1	Protein Homology	CDS	8522	8758	.	-	0	ID=cds-WP_058331688.1;Parent=gene-C9E94_RS10755;Dbxref=GenBank:WP_058331688.1;Name=WP_058331688.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996066.1;locus_tag=C9E94_RS10755;product=TIGR03758 family integrating conjugative element protein;protein_id=WP_058331688.1;transl_table=11
NZ_PYJR01000082.1	RefSeq	gene	8755	9066	.	-	.	ID=gene-C9E94_RS10760;Name=C9E94_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10760;old_locus_tag=C9E94_10990
NZ_PYJR01000082.1	Protein Homology	CDS	8755	9066	.	-	0	ID=cds-WP_135401001.1;Parent=gene-C9E94_RS10760;Dbxref=GenBank:WP_135401001.1;Name=WP_135401001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001242998.1;locus_tag=C9E94_RS10760;product=RAQPRD family integrative conjugative element protein;protein_id=WP_135401001.1;transl_table=11
NZ_PYJR01000082.1	RefSeq	gene	9405	10100	.	+	.	ID=gene-C9E94_RS10765;Name=C9E94_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10765;old_locus_tag=C9E94_10995
NZ_PYJR01000082.1	Protein Homology	CDS	9405	10100	.	+	0	ID=cds-WP_440980437.1;Parent=gene-C9E94_RS10765;Dbxref=GenBank:WP_440980437.1;Name=WP_440980437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004233718.1;locus_tag=C9E94_RS10765;product=hypothetical protein;protein_id=WP_440980437.1;transl_table=11
NZ_PYJR01000082.1	RefSeq	gene	10335	11099	.	-	.	ID=gene-C9E94_RS10770;Name=C9E94_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10770;old_locus_tag=C9E94_11000
NZ_PYJR01000082.1	Protein Homology	CDS	10335	11099	.	-	0	ID=cds-WP_135401003.1;Parent=gene-C9E94_RS10770;Dbxref=GenBank:WP_135401003.1;Name=WP_135401003.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662974.1;locus_tag=C9E94_RS10770;product=TIGR03747 family integrating conjugative element membrane protein;protein_id=WP_135401003.1;transl_table=11
NZ_PYJR01000082.1	RefSeq	gene	11109	11381	.	-	.	ID=gene-C9E94_RS10775;Name=C9E94_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10775;old_locus_tag=C9E94_11005
NZ_PYJR01000082.1	Protein Homology	CDS	11109	11381	.	-	0	ID=cds-WP_255123283.1;Parent=gene-C9E94_RS10775;Dbxref=GenBank:WP_255123283.1;Name=WP_255123283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015912582.1;locus_tag=C9E94_RS10775;product=hypothetical protein;protein_id=WP_255123283.1;transl_table=11
NZ_PYJR01000082.1	RefSeq	gene	11392	13476	.	-	.	ID=gene-C9E94_RS10780;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=C9E94_RS10780;old_locus_tag=C9E94_11010
NZ_PYJR01000082.1	Protein Homology	CDS	11392	13476	.	-	0	ID=cds-WP_135401005.1;Parent=gene-C9E94_RS10780;Dbxref=GenBank:WP_135401005.1;Name=WP_135401005.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001283927.1;locus_tag=C9E94_RS10780;product=type IV conjugative transfer system coupling protein TraD;protein_id=WP_135401005.1;transl_table=11
NZ_PYJR01000082.1	RefSeq	gene	13580	14092	.	-	.	ID=gene-C9E94_RS10785;Name=C9E94_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10785;old_locus_tag=C9E94_11015
NZ_PYJR01000082.1	Protein Homology	CDS	13580	14092	.	-	0	ID=cds-WP_135401006.1;Parent=gene-C9E94_RS10785;Dbxref=GenBank:WP_135401006.1;Name=WP_135401006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662975.1;locus_tag=C9E94_RS10785;product=integrating conjugative element protein;protein_id=WP_135401006.1;transl_table=11
NZ_PYJR01000082.1	RefSeq	gene	14089	14655	.	-	.	ID=gene-C9E94_RS10790;Name=C9E94_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10790;old_locus_tag=C9E94_11020
NZ_PYJR01000082.1	Protein Homology	CDS	14089	14655	.	-	0	ID=cds-WP_135401007.1;Parent=gene-C9E94_RS10790;Dbxref=GenBank:WP_135401007.1;Name=WP_135401007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004856702.1;locus_tag=C9E94_RS10790;product=transglycosylase SLT domain-containing protein;protein_id=WP_135401007.1;transl_table=11
NZ_PYJR01000082.1	RefSeq	gene	14637	15401	.	-	.	ID=gene-C9E94_RS10795;Name=C9E94_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10795;old_locus_tag=C9E94_11025
NZ_PYJR01000082.1	Protein Homology	CDS	14637	15401	.	-	0	ID=cds-WP_135401008.1;Parent=gene-C9E94_RS10795;Dbxref=GenBank:WP_135401008.1;Name=WP_135401008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000713623.1;locus_tag=C9E94_RS10795;product=TIGR03759 family integrating conjugative element protein;protein_id=WP_135401008.1;transl_table=11
NZ_PYJR01000082.1	RefSeq	gene	15412	16131	.	-	.	ID=gene-C9E94_RS10800;Name=C9E94_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10800;old_locus_tag=C9E94_11030
NZ_PYJR01000082.1	Protein Homology	CDS	15412	16131	.	-	0	ID=cds-WP_135401009.1;Parent=gene-C9E94_RS10800;Dbxref=GenBank:WP_135401009.1;Name=WP_135401009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005792.1;locus_tag=C9E94_RS10800;product=hypothetical protein;protein_id=WP_135401009.1;transl_table=11
NZ_PYJR01000082.1	RefSeq	gene	16128	16724	.	-	.	ID=gene-C9E94_RS10805;Name=C9E94_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10805;old_locus_tag=C9E94_11035
NZ_PYJR01000082.1	Protein Homology	CDS	16128	16724	.	-	0	ID=cds-WP_135401010.1;Parent=gene-C9E94_RS10805;Dbxref=GenBank:WP_135401010.1;Name=WP_135401010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001048687.1;locus_tag=C9E94_RS10805;product=PilL N-terminal domain-containing protein;protein_id=WP_135401010.1;transl_table=11
NZ_PYJR01000082.1	RefSeq	gene	16885	17421	.	-	.	ID=gene-C9E94_RS10810;Name=C9E94_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10810;old_locus_tag=C9E94_11040
NZ_PYJR01000082.1	Protein Homology	CDS	16885	17421	.	-	0	ID=cds-WP_135401011.1;Parent=gene-C9E94_RS10810;Dbxref=GenBank:WP_135401011.1;Name=WP_135401011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011817111.1;locus_tag=C9E94_RS10810;product=STY4534 family ICE replication protein;protein_id=WP_135401011.1;transl_table=11
NZ_PYJR01000082.1	RefSeq	gene	17813	18418	.	+	.	ID=gene-C9E94_RS10820;Name=C9E94_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10820;old_locus_tag=C9E94_11050
NZ_PYJR01000082.1	Protein Homology	CDS	17813	18418	.	+	0	ID=cds-WP_080190419.1;Parent=gene-C9E94_RS10820;Dbxref=GenBank:WP_080190419.1;Name=WP_080190419.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017697.6;locus_tag=C9E94_RS10820;product=poly-gamma-glutamate hydrolase family protein;protein_id=WP_080190419.1;transl_table=11
NZ_PYJR01000082.1	RefSeq	gene	18502	19269	.	-	.	ID=gene-C9E94_RS10825;Name=C9E94_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10825;old_locus_tag=C9E94_11055
NZ_PYJR01000082.1	Protein Homology	CDS	18502	19269	.	-	0	ID=cds-WP_080190417.1;Parent=gene-C9E94_RS10825;Dbxref=GenBank:WP_080190417.1;Name=WP_080190417.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025027.6;locus_tag=C9E94_RS10825;product=DUF4145 domain-containing protein;protein_id=WP_080190417.1;transl_table=11
NZ_PYJR01000082.1	RefSeq	gene	19569	21572	.	-	.	ID=gene-C9E94_RS10830;Name=C9E94_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10830;old_locus_tag=C9E94_11060
NZ_PYJR01000082.1	Protein Homology	CDS	19569	21572	.	-	0	ID=cds-WP_135401012.1;Parent=gene-C9E94_RS10830;Dbxref=GenBank:WP_135401012.1;Name=WP_135401012.1;Ontology_term=GO:0006261,GO:0006265,GO:0006310,GO:0051304,GO:0003677,GO:0003916,GO:0003917,GO:0098847;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA,sequence-specific single stranded DNA binding|0098847||IEA;go_process=DNA-templated DNA replication|0006261||IEA,DNA topological change|0006265||IEA,DNA recombination|0006310||IEA,chromosome separation|0051304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000765276.1;locus_tag=C9E94_RS10830;product=DNA topoisomerase III;protein_id=WP_135401012.1;transl_table=11
NZ_PYJR01000082.1	RefSeq	gene	21569	22132	.	-	.	ID=gene-C9E94_RS10835;Name=C9E94_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10835;old_locus_tag=C9E94_11065
NZ_PYJR01000082.1	Protein Homology	CDS	21569	22132	.	-	0	ID=cds-WP_135401013.1;Parent=gene-C9E94_RS10835;Dbxref=GenBank:WP_135401013.1;Name=WP_135401013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000620766.1;locus_tag=C9E94_RS10835;product=hypothetical protein;protein_id=WP_135401013.1;transl_table=11
NZ_PYJR01000082.1	RefSeq	gene	22119	22871	.	-	.	ID=gene-C9E94_RS10840;Name=C9E94_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10840;old_locus_tag=C9E94_11070
NZ_PYJR01000082.1	Protein Homology	CDS	22119	22871	.	-	0	ID=cds-WP_135401014.1;Parent=gene-C9E94_RS10840;Dbxref=GenBank:WP_135401014.1;Name=WP_135401014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001281091.1;locus_tag=C9E94_RS10840;product=PFL_4669 family integrating conjugative element protein;protein_id=WP_135401014.1;transl_table=11
NZ_PYJR01000082.1	RefSeq	gene	23058	23822	.	-	.	ID=gene-C9E94_RS10845;Name=C9E94_RS10845;end_range=23822,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10845;old_locus_tag=C9E94_11075;partial=true
NZ_PYJR01000082.1	Protein Homology	CDS	23058	23822	.	-	0	ID=cds-WP_217810252.1;Parent=gene-C9E94_RS10845;Dbxref=GenBank:WP_217810252.1;Name=WP_217810252.1;end_range=23822,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015831.6;locus_tag=C9E94_RS10845;partial=true;product=YadA C-terminal domain-containing protein;protein_id=WP_217810252.1;transl_table=11
##sequence-region NZ_PYJR01000040.1 1 23635
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000040.1	RefSeq	region	1	23635	.	+	.	ID=NZ_PYJR01000040.1:1..23635;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000040.1	RefSeq	gene	1	322	.	+	.	ID=gene-C9E94_RS04715;Name=C9E94_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04715;old_locus_tag=C9E94_04845;partial=true;start_range=.,1
NZ_PYJR01000040.1	Protein Homology	CDS	1	322	.	+	1	ID=cds-WP_031612821.1;Parent=gene-C9E94_RS04715;Dbxref=GenBank:WP_031612821.1;Name=WP_031612821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460741.1;locus_tag=C9E94_RS04715;partial=true;product=DUF4427 domain-containing protein;protein_id=WP_031612821.1;start_range=.,1;transl_table=11
NZ_PYJR01000040.1	RefSeq	gene	481	1572	.	-	.	ID=gene-C9E94_RS04720;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=C9E94_RS04720;old_locus_tag=C9E94_04850
NZ_PYJR01000040.1	Protein Homology	CDS	481	1572	.	-	0	ID=cds-WP_135400844.1;Parent=gene-C9E94_RS04720;Dbxref=GenBank:WP_135400844.1;Name=WP_135400844.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=C9E94_RS04720;product=redox-regulated ATPase YchF;protein_id=WP_135400844.1;transl_table=11
NZ_PYJR01000040.1	RefSeq	gene	1689	2273	.	-	.	ID=gene-C9E94_RS04725;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=C9E94_RS04725;old_locus_tag=C9E94_04855
NZ_PYJR01000040.1	Protein Homology	CDS	1689	2273	.	-	0	ID=cds-WP_000985595.1;Parent=gene-C9E94_RS04725;Dbxref=GenBank:WP_000985595.1;Name=WP_000985595.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=C9E94_RS04725;product=aminoacyl-tRNA hydrolase;protein_id=WP_000985595.1;transl_table=11
NZ_PYJR01000040.1	RefSeq	gene	2549	2827	.	+	.	ID=gene-C9E94_RS04730;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=C9E94_RS04730;old_locus_tag=C9E94_04860
NZ_PYJR01000040.1	Protein Homology	CDS	2549	2827	.	+	0	ID=cds-WP_000823878.1;Parent=gene-C9E94_RS04730;Dbxref=GenBank:WP_000823878.1;Name=WP_000823878.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460738.1;locus_tag=C9E94_RS04730;product=stress-induced protein YchH;protein_id=WP_000823878.1;transl_table=11
NZ_PYJR01000040.1	RefSeq	gene	2872	4557	.	-	.	ID=gene-C9E94_RS04735;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=C9E94_RS04735;old_locus_tag=C9E94_04865
NZ_PYJR01000040.1	Protein Homology	CDS	2872	4557	.	-	0	ID=cds-WP_001037186.1;Parent=gene-C9E94_RS04735;Dbxref=GenBank:WP_001037186.1;Name=WP_001037186.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525165.1;locus_tag=C9E94_RS04735;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_001037186.1;transl_table=11
NZ_PYJR01000040.1	RefSeq	gene	4682	5629	.	-	.	ID=gene-C9E94_RS04740;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=C9E94_RS04740;old_locus_tag=C9E94_04870
NZ_PYJR01000040.1	Protein Homology	CDS	4682	5629	.	-	0	ID=cds-WP_001518537.1;Parent=gene-C9E94_RS04740;Dbxref=GenBank:WP_001518537.1;Name=WP_001518537.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=C9E94_RS04740;product=ribose-phosphate diphosphokinase;protein_id=WP_001518537.1;transl_table=11
NZ_PYJR01000040.1	RefSeq	gene	5895	6746	.	-	.	ID=gene-C9E94_RS04745;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=C9E94_RS04745;old_locus_tag=C9E94_04875
NZ_PYJR01000040.1	Protein Homology	CDS	5895	6746	.	-	0	ID=cds-WP_023245082.1;Parent=gene-C9E94_RS04745;Dbxref=GenBank:WP_023245082.1;Name=WP_023245082.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460735.1;locus_tag=C9E94_RS04745;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_023245082.1;transl_table=11
NZ_PYJR01000040.1	RefSeq	gene	6743	7366	.	-	.	ID=gene-C9E94_RS04750;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=C9E94_RS04750;old_locus_tag=C9E94_04880
NZ_PYJR01000040.1	Protein Homology	CDS	6743	7366	.	-	0	ID=cds-WP_000174484.1;Parent=gene-C9E94_RS04750;Dbxref=GenBank:WP_000174484.1;Name=WP_000174484.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460734.1;locus_tag=C9E94_RS04750;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_000174484.1;transl_table=11
NZ_PYJR01000040.1	RefSeq	gene	7680	8936	.	+	.	ID=gene-C9E94_RS04755;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=C9E94_RS04755;old_locus_tag=C9E94_04885
NZ_PYJR01000040.1	Protein Homology	CDS	7680	8936	.	+	0	ID=cds-WP_000173208.1;Parent=gene-C9E94_RS04755;Dbxref=GenBank:WP_000173208.1;Name=WP_000173208.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=C9E94_RS04755;product=glutamyl-tRNA reductase;protein_id=WP_000173208.1;transl_table=11
NZ_PYJR01000040.1	RefSeq	gene	8977	10059	.	+	.	ID=gene-C9E94_RS04760;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=C9E94_RS04760;old_locus_tag=C9E94_04890
NZ_PYJR01000040.1	Protein Homology	CDS	8977	10059	.	+	0	ID=cds-WP_000804703.1;Parent=gene-C9E94_RS04760;Dbxref=GenBank:WP_000804703.1;Name=WP_000804703.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=C9E94_RS04760;product=peptide chain release factor 1;protein_id=WP_000804703.1;transl_table=11
NZ_PYJR01000040.1	RefSeq	gene	10059	10892	.	+	.	ID=gene-C9E94_RS04765;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=C9E94_RS04765;old_locus_tag=C9E94_04895
NZ_PYJR01000040.1	Protein Homology	CDS	10059	10892	.	+	0	ID=cds-WP_135400845.1;Parent=gene-C9E94_RS04765;Dbxref=GenBank:WP_135400845.1;Name=WP_135400845.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460731.1;locus_tag=C9E94_RS04765;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_135400845.1;transl_table=11
NZ_PYJR01000040.1	RefSeq	gene	10889	11278	.	+	.	ID=gene-C9E94_RS04770;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=C9E94_RS04770;old_locus_tag=C9E94_04900
NZ_PYJR01000040.1	Protein Homology	CDS	10889	11278	.	+	0	ID=cds-WP_000150667.1;Parent=gene-C9E94_RS04770;Dbxref=GenBank:WP_000150667.1;Name=WP_000150667.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460730.1;locus_tag=C9E94_RS04770;product=invasion regulator SirB2;protein_id=WP_000150667.1;transl_table=11
NZ_PYJR01000040.1	RefSeq	gene	11282	12091	.	+	.	ID=gene-C9E94_RS04775;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=C9E94_RS04775;old_locus_tag=C9E94_04905
NZ_PYJR01000040.1	Protein Homology	CDS	11282	12091	.	+	0	ID=cds-WP_135400846.1;Parent=gene-C9E94_RS04775;Dbxref=GenBank:WP_135400846.1;Name=WP_135400846.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460729.1;locus_tag=C9E94_RS04775;product=invasion regulator SirB1;protein_id=WP_135400846.1;transl_table=11
NZ_PYJR01000040.1	RefSeq	gene	12129	12983	.	+	.	ID=gene-C9E94_RS04780;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=C9E94_RS04780;old_locus_tag=C9E94_04910
NZ_PYJR01000040.1	Protein Homology	CDS	12129	12983	.	+	0	ID=cds-WP_000811046.1;Parent=gene-C9E94_RS04780;Dbxref=GenBank:WP_000811046.1;Name=WP_000811046.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460728.1;locus_tag=C9E94_RS04780;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_000811046.1;transl_table=11
NZ_PYJR01000040.1	RefSeq	gene	13037	14137	.	-	.	ID=gene-C9E94_RS04785;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=C9E94_RS04785;old_locus_tag=C9E94_04915
NZ_PYJR01000040.1	Protein Homology	CDS	13037	14137	.	-	0	ID=cds-WP_079967775.1;Parent=gene-C9E94_RS04785;Dbxref=GenBank:WP_079967775.1;Name=WP_079967775.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460727.1;locus_tag=C9E94_RS04785;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_079967775.1;transl_table=11
NZ_PYJR01000040.1	RefSeq	gene	14404	14634	.	+	.	ID=gene-C9E94_RS04790;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=C9E94_RS04790;old_locus_tag=C9E94_04920
NZ_PYJR01000040.1	Protein Homology	CDS	14404	14634	.	+	0	ID=cds-WP_001146392.1;Parent=gene-C9E94_RS04790;Dbxref=GenBank:WP_001146392.1;Name=WP_001146392.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460726.1;locus_tag=C9E94_RS04790;product=putative cation transport regulator ChaB;protein_id=WP_001146392.1;transl_table=11
NZ_PYJR01000040.1	RefSeq	gene	14714	15067	.	-	.	ID=gene-C9E94_RS04795;Name=C9E94_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04795;old_locus_tag=C9E94_04925
NZ_PYJR01000040.1	Protein Homology	CDS	14714	15067	.	-	0	ID=cds-WP_001179794.1;Parent=gene-C9E94_RS04795;Dbxref=GenBank:WP_001179794.1;Name=WP_001179794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460725.1;locus_tag=C9E94_RS04795;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WP_001179794.1;transl_table=11
NZ_PYJR01000040.1	RefSeq	gene	15244	16668	.	+	.	ID=gene-C9E94_RS04800;Name=C9E94_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04800;old_locus_tag=C9E94_04930
NZ_PYJR01000040.1	Protein Homology	CDS	15244	16668	.	+	0	ID=cds-WP_024133476.1;Parent=gene-C9E94_RS04800;Dbxref=GenBank:WP_024133476.1;Name=WP_024133476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460724.3;locus_tag=C9E94_RS04800;product=YchO/YchP family invasin;protein_id=WP_024133476.1;transl_table=11
NZ_PYJR01000040.1	RefSeq	gene	16669	17319	.	-	.	ID=gene-C9E94_RS04805;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=C9E94_RS04805;old_locus_tag=C9E94_04935
NZ_PYJR01000040.1	Protein Homology	CDS	16669	17319	.	-	0	ID=cds-WP_001064598.1;Parent=gene-C9E94_RS04805;Dbxref=GenBank:WP_001064598.1;Name=WP_001064598.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460723.1;locus_tag=C9E94_RS04805;product=two-component system response regulator NarL;protein_id=WP_001064598.1;transl_table=11
NZ_PYJR01000040.1	RefSeq	gene	17312	19108	.	-	.	ID=gene-C9E94_RS04810;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=C9E94_RS04810;old_locus_tag=C9E94_04940
NZ_PYJR01000040.1	Protein Homology	CDS	17312	19108	.	-	0	ID=cds-WP_000476244.1;Parent=gene-C9E94_RS04810;Dbxref=GenBank:WP_000476244.1;Name=WP_000476244.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460722.1;locus_tag=C9E94_RS04810;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_000476244.1;transl_table=11
NZ_PYJR01000040.1	RefSeq	gene	19449	20846	.	+	.	ID=gene-C9E94_RS04820;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=C9E94_RS04820;old_locus_tag=C9E94_04950
NZ_PYJR01000040.1	Protein Homology	CDS	19449	20846	.	+	0	ID=cds-WP_000019848.1;Parent=gene-C9E94_RS04820;Dbxref=GenBank:WP_000019848.1;Name=WP_000019848.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460721.1;locus_tag=C9E94_RS04820;product=nitrate transporter NarK;protein_id=WP_000019848.1;transl_table=11
NZ_PYJR01000040.1	RefSeq	gene	21234	23635	.	+	.	ID=gene-C9E94_RS04825;Name=C9E94_RS04825;end_range=23635,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS04825;old_locus_tag=C9E94_04955;partial=true
NZ_PYJR01000040.1	Protein Homology	CDS	21234	23635	.	+	0	ID=cds-WP_064034227.1;Parent=gene-C9E94_RS04825;Dbxref=GenBank:WP_064034227.1;Name=WP_064034227.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;end_range=23635,.;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=C9E94_RS04825;partial=true;product=nitrate reductase subunit alpha;protein_id=WP_064034227.1;transl_table=11
##sequence-region NZ_PYJR01000139.1 1 23398
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000139.1	RefSeq	region	1	23398	.	+	.	ID=NZ_PYJR01000139.1:1..23398;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000139.1	RefSeq	gene	447	11921	.	+	.	ID=gene-C9E94_RS22615;Name=bapA;gbkey=Gene;gene=bapA;gene_biotype=protein_coding;locus_tag=C9E94_RS22615;old_locus_tag=C9E94_23210
NZ_PYJR01000139.1	Protein Homology	CDS	447	11921	.	+	0	ID=cds-WP_135401252.1;Parent=gene-C9E94_RS22615;Dbxref=GenBank:WP_135401252.1;Name=WP_135401252.1;gbkey=CDS;gene=bapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237670.1;locus_tag=C9E94_RS22615;product=biofilm-associated protein BapA;protein_id=WP_135401252.1;transl_table=11
NZ_PYJR01000139.1	RefSeq	gene	11986	13395	.	+	.	ID=gene-C9E94_RS22620;Name=C9E94_RS22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22620;old_locus_tag=C9E94_23215
NZ_PYJR01000139.1	Protein Homology	CDS	11986	13395	.	+	0	ID=cds-WP_000533865.1;Parent=gene-C9E94_RS22620;Dbxref=GenBank:WP_000533865.1;Name=WP_000533865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461619.1;locus_tag=C9E94_RS22620;product=TolC family outer membrane protein;protein_id=WP_000533865.1;transl_table=11
NZ_PYJR01000139.1	RefSeq	gene	13392	15572	.	+	.	ID=gene-C9E94_RS22625;Name=C9E94_RS22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22625;old_locus_tag=C9E94_23220
NZ_PYJR01000139.1	Protein Homology	CDS	13392	15572	.	+	0	ID=cds-WP_135401253.1;Parent=gene-C9E94_RS22625;Dbxref=GenBank:WP_135401253.1;Name=WP_135401253.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461620.1;locus_tag=C9E94_RS22625;product=type I secretion system permease/ATPase;protein_id=WP_135401253.1;transl_table=11
NZ_PYJR01000139.1	RefSeq	gene	15580	16743	.	+	.	ID=gene-C9E94_RS22630;Name=C9E94_RS22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22630;old_locus_tag=C9E94_23225
NZ_PYJR01000139.1	Protein Homology	CDS	15580	16743	.	+	0	ID=cds-WP_000342601.1;Parent=gene-C9E94_RS22630;Dbxref=GenBank:WP_000342601.1;Name=WP_000342601.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461621.1;locus_tag=C9E94_RS22630;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_000342601.1;transl_table=11
NZ_PYJR01000139.1	RefSeq	gene	16815	17177	.	+	.	ID=gene-C9E94_RS22635;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=C9E94_RS22635;old_locus_tag=C9E94_23230
NZ_PYJR01000139.1	cmsearch	tmRNA	16815	17177	.	+	.	ID=rna-C9E94_RS22635;Parent=gene-C9E94_RS22635;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS22635;product=transfer-messenger RNA
NZ_PYJR01000139.1	cmsearch	exon	16815	17177	.	+	.	ID=exon-C9E94_RS22635-1;Parent=rna-C9E94_RS22635;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS22635;product=transfer-messenger RNA
NZ_PYJR01000139.1	RefSeq	gene	17400	18568	.	+	.	ID=gene-C9E94_RS22640;Name=C9E94_RS22640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22640;old_locus_tag=C9E94_23235
NZ_PYJR01000139.1	Protein Homology	CDS	17400	17649	.	+	0	ID=cds-WP_110161805.1;Parent=gene-C9E94_RS22640;Dbxref=GenBank:WP_110161805.1;Name=WP_110161805.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611482.1;locus_tag=C9E94_RS22640;product=IS3 family transposase;protein_id=WP_110161805.1;transl_table=11
NZ_PYJR01000139.1	Protein Homology	CDS	17649	18568	.	+	2	ID=cds-WP_110161805.1;Parent=gene-C9E94_RS22640;Dbxref=GenBank:WP_110161805.1;Name=WP_110161805.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611482.1;locus_tag=C9E94_RS22640;product=IS3 family transposase;protein_id=WP_110161805.1;transl_table=11
NZ_PYJR01000139.1	RefSeq	gene	18936	19163	.	+	.	ID=gene-C9E94_RS22645;Name=C9E94_RS22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22645;old_locus_tag=C9E94_23240
NZ_PYJR01000139.1	Protein Homology	CDS	18936	19163	.	+	0	ID=cds-WP_000088415.1;Parent=gene-C9E94_RS22645;Dbxref=GenBank:WP_000088415.1;Name=WP_000088415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442260.1;locus_tag=C9E94_RS22645;product=hypothetical protein;protein_id=WP_000088415.1;transl_table=11
NZ_PYJR01000139.1	RefSeq	gene	19194	20153	.	+	.	ID=gene-C9E94_RS22650;Name=C9E94_RS22650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22650;old_locus_tag=C9E94_23245
NZ_PYJR01000139.1	Protein Homology	CDS	19194	20153	.	+	0	ID=cds-WP_000843207.1;Parent=gene-C9E94_RS22650;Dbxref=GenBank:WP_000843207.1;Name=WP_000843207.1;Ontology_term=GO:0006974,GO:0003723,GO:0003964,GO:0046872;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-directed DNA polymerase activity|0003964||IEA,metal ion binding|0046872||IEA;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524528.1;locus_tag=C9E94_RS22650;product=reverse transcriptase family protein;protein_id=WP_000843207.1;transl_table=11
NZ_PYJR01000139.1	RefSeq	gene	20056	21042	.	+	.	ID=gene-C9E94_RS22655;Name=C9E94_RS22655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22655;old_locus_tag=C9E94_23250
NZ_PYJR01000139.1	Protein Homology	CDS	20056	21042	.	+	0	ID=cds-WP_217810255.1;Parent=gene-C9E94_RS22655;Dbxref=GenBank:WP_217810255.1;Name=WP_217810255.1;Ontology_term=GO:0050135;gbkey=CDS;go_function=NADP+ nucleosidase activity|0050135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540728.1;locus_tag=C9E94_RS22655;product=TIR domain-containing protein;protein_id=WP_217810255.1;transl_table=11
NZ_PYJR01000139.1	RefSeq	pseudogene	21404	21632	.	-	.	ID=gene-C9E94_RS22660;Name=C9E94_RS22660;end_range=21632,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS22660;old_locus_tag=C9E94_23255;partial=true;pseudo=true
NZ_PYJR01000139.1	Protein Homology	CDS	21404	21632	.	-	0	ID=cds-C9E94_RS22660;Parent=gene-C9E94_RS22660;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=21632,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001142400.1;locus_tag=C9E94_RS22660;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
NZ_PYJR01000139.1	RefSeq	gene	21660	22199	.	-	.	ID=gene-C9E94_RS22665;Name=fljA;gbkey=Gene;gene=fljA;gene_biotype=protein_coding;locus_tag=C9E94_RS22665;old_locus_tag=C9E94_23260
NZ_PYJR01000139.1	Protein Homology	CDS	21660	22199	.	-	0	ID=cds-WP_135401254.1;Parent=gene-C9E94_RS22665;Dbxref=GenBank:WP_135401254.1;Name=WP_135401254.1;gbkey=CDS;gene=fljA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461697.1;locus_tag=C9E94_RS22665;product=phase 1 flagellin gene repressor FljA;protein_id=WP_135401254.1;transl_table=11
NZ_PYJR01000139.1	RefSeq	gene	22267	23398	.	-	.	ID=gene-C9E94_RS22670;Name=C9E94_RS22670;end_range=23398,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22670;old_locus_tag=C9E94_23265;partial=true
NZ_PYJR01000139.1	Protein Homology	CDS	22267	23398	.	-	1	ID=cds-WP_135401255.1;Parent=gene-C9E94_RS22670;Dbxref=GenBank:WP_135401255.1;Name=WP_135401255.1;Ontology_term=GO:0071973,GO:0005198;end_range=23398,.;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461698.1;locus_tag=C9E94_RS22670;partial=true;product=flagellin;protein_id=WP_135401255.1;transl_table=11
##sequence-region NZ_PYJR01000015.1 1 22255
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000015.1	RefSeq	region	1	22255	.	+	.	ID=NZ_PYJR01000015.1:1..22255;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000015.1	RefSeq	gene	340	1374	.	+	.	ID=gene-C9E94_RS01405;Name=C9E94_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01405;old_locus_tag=C9E94_01435
NZ_PYJR01000015.1	Protein Homology	CDS	340	1374	.	+	0	ID=cds-WP_000798206.1;Parent=gene-C9E94_RS01405;Dbxref=GenBank:WP_000798206.1;Name=WP_000798206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462607.1;locus_tag=C9E94_RS01405;product=glycosyltransferase;protein_id=WP_000798206.1;transl_table=11
NZ_PYJR01000015.1	RefSeq	gene	1361	2323	.	-	.	ID=gene-C9E94_RS01410;Name=C9E94_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01410;old_locus_tag=C9E94_01440
NZ_PYJR01000015.1	Protein Homology	CDS	1361	2323	.	-	0	ID=cds-WP_001135518.1;Parent=gene-C9E94_RS01410;Dbxref=GenBank:WP_001135518.1;Name=WP_001135518.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462606.1;locus_tag=C9E94_RS01410;product=divergent polysaccharide deacetylase family protein;protein_id=WP_001135518.1;transl_table=11
NZ_PYJR01000015.1	RefSeq	gene	2327	3586	.	-	.	ID=gene-C9E94_RS01415;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=C9E94_RS01415;old_locus_tag=C9E94_01445
NZ_PYJR01000015.1	Protein Homology	CDS	2327	3586	.	-	0	ID=cds-WP_234146447.1;Parent=gene-C9E94_RS01415;Dbxref=GenBank:WP_234146447.1;Name=WP_234146447.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=C9E94_RS01415;product=murein hydrolase activator EnvC;protein_id=WP_234146447.1;transl_table=11
NZ_PYJR01000015.1	RefSeq	gene	3620	5164	.	-	.	ID=gene-C9E94_RS01420;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=C9E94_RS01420;old_locus_tag=C9E94_01450
NZ_PYJR01000015.1	Protein Homology	CDS	3620	5164	.	-	0	ID=cds-WP_000116576.1;Parent=gene-C9E94_RS01420;Dbxref=GenBank:WP_000116576.1;Name=WP_000116576.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=C9E94_RS01420;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_000116576.1;transl_table=11
NZ_PYJR01000015.1	RefSeq	gene	5412	5843	.	+	.	ID=gene-C9E94_RS01425;Name=C9E94_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01425;old_locus_tag=C9E94_01455
NZ_PYJR01000015.1	Protein Homology	CDS	5412	5843	.	+	0	ID=cds-WP_001156179.1;Parent=gene-C9E94_RS01425;Dbxref=GenBank:WP_001156179.1;Name=WP_001156179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462603.1;locus_tag=C9E94_RS01425;product=rhodanese-like domain-containing protein;protein_id=WP_001156179.1;transl_table=11
NZ_PYJR01000015.1	RefSeq	gene	5929	6180	.	+	.	ID=gene-C9E94_RS01430;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=C9E94_RS01430;old_locus_tag=C9E94_01460
NZ_PYJR01000015.1	Protein Homology	CDS	5929	6180	.	+	0	ID=cds-WP_001273795.1;Parent=gene-C9E94_RS01430;Dbxref=GenBank:WP_001273795.1;Name=WP_001273795.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462602.1;locus_tag=C9E94_RS01430;product=glutaredoxin 3;protein_id=WP_001273795.1;transl_table=11
NZ_PYJR01000015.1	RefSeq	gene	6224	6691	.	+	.	ID=gene-C9E94_RS01435;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=C9E94_RS01435;old_locus_tag=C9E94_01465
NZ_PYJR01000015.1	Protein Homology	CDS	6224	6691	.	+	0	ID=cds-WP_000003370.1;Parent=gene-C9E94_RS01435;Dbxref=GenBank:WP_000003370.1;Name=WP_000003370.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=C9E94_RS01435;product=protein-export chaperone SecB;protein_id=WP_000003370.1;transl_table=11
NZ_PYJR01000015.1	RefSeq	gene	6691	7710	.	+	.	ID=gene-C9E94_RS01440;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=C9E94_RS01440;old_locus_tag=C9E94_01470
NZ_PYJR01000015.1	Protein Homology	CDS	6691	7710	.	+	0	ID=cds-WP_001076596.1;Parent=gene-C9E94_RS01440;Dbxref=GenBank:WP_001076596.1;Name=WP_001076596.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462600.1;locus_tag=C9E94_RS01440;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001076596.1;transl_table=11
NZ_PYJR01000015.1	RefSeq	gene	7788	8609	.	+	.	ID=gene-C9E94_RS01445;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=C9E94_RS01445;old_locus_tag=C9E94_01475
NZ_PYJR01000015.1	Protein Homology	CDS	7788	8609	.	+	0	ID=cds-WP_001112113.1;Parent=gene-C9E94_RS01445;Dbxref=GenBank:WP_001112113.1;Name=WP_001112113.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=C9E94_RS01445;product=serine O-acetyltransferase;protein_id=WP_001112113.1;transl_table=11
NZ_PYJR01000015.1	RefSeq	gene	8692	10002	.	-	.	ID=gene-C9E94_RS01450;Name=C9E94_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01450;old_locus_tag=C9E94_01480
NZ_PYJR01000015.1	Protein Homology	CDS	8692	10002	.	-	0	ID=cds-WP_001092104.1;Parent=gene-C9E94_RS01450;Dbxref=GenBank:WP_001092104.1;Name=WP_001092104.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462598.1;locus_tag=C9E94_RS01450;product=MFS transporter;protein_id=WP_001092104.1;transl_table=11
NZ_PYJR01000015.1	RefSeq	gene	10076	11272	.	-	.	ID=gene-C9E94_RS01455;Name=C9E94_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01455;old_locus_tag=C9E94_01485
NZ_PYJR01000015.1	Protein Homology	CDS	10076	11272	.	-	0	ID=cds-WP_001218249.1;Parent=gene-C9E94_RS01455;Dbxref=GenBank:WP_001218249.1;Name=WP_001218249.1;Ontology_term=GO:0046392,GO:1903663,GO:0008867,GO:1990594;gbkey=CDS;go_function=galactarate dehydratase activity|0008867||IEA,L-altrarate dehydratase activity|1990594||IEA;go_process=galactarate catabolic process|0046392||IEA,L-altrarate catabolic process|1903663||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462597.1;locus_tag=C9E94_RS01455;product=L-talarate/galactarate dehydratase;protein_id=WP_001218249.1;transl_table=11
NZ_PYJR01000015.1	RefSeq	gene	11591	12595	.	+	.	ID=gene-C9E94_RS01460;Name=C9E94_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01460;old_locus_tag=C9E94_01495
NZ_PYJR01000015.1	Protein Homology	CDS	11591	12595	.	+	0	ID=cds-WP_167853634.1;Parent=gene-C9E94_RS01460;Dbxref=GenBank:WP_167853634.1;Name=WP_167853634.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462596.1;locus_tag=C9E94_RS01460;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_167853634.1;transl_table=11
NZ_PYJR01000015.1	RefSeq	gene	12663	13136	.	-	.	ID=gene-C9E94_RS01465;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=C9E94_RS01465;old_locus_tag=C9E94_01500
NZ_PYJR01000015.1	Protein Homology	CDS	12663	13136	.	-	0	ID=cds-WP_000932335.1;Parent=gene-C9E94_RS01465;Dbxref=GenBank:WP_000932335.1;Name=WP_000932335.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=C9E94_RS01465;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_000932335.1;transl_table=11
NZ_PYJR01000015.1	RefSeq	gene	13200	14390	.	-	.	ID=gene-C9E94_RS01470;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=C9E94_RS01470;old_locus_tag=C9E94_01505
NZ_PYJR01000015.1	Protein Homology	CDS	13200	14390	.	-	0	ID=cds-WP_135400749.1;Parent=gene-C9E94_RS01470;Dbxref=GenBank:WP_135400749.1;Name=WP_135400749.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=C9E94_RS01470;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WP_135400749.1;transl_table=11
NZ_PYJR01000015.1	RefSeq	pseudogene	14387	15163	.	-	.	ID=gene-C9E94_RS01475;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=pseudogene;locus_tag=C9E94_RS01475;old_locus_tag=C9E94_01510;pseudo=true
NZ_PYJR01000015.1	Protein Homology	CDS	14387	15163	.	-	0	ID=cds-C9E94_RS01475;Parent=gene-C9E94_RS01475;Note=internal stop;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462593.1;locus_tag=C9E94_RS01475;product=transcriptional regulator LldR;pseudo=true;transl_table=11
NZ_PYJR01000015.1	RefSeq	gene	15160	16815	.	-	.	ID=gene-C9E94_RS01480;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=C9E94_RS01480;old_locus_tag=C9E94_01515
NZ_PYJR01000015.1	Protein Homology	CDS	15160	16815	.	-	0	ID=cds-WP_001055305.1;Parent=gene-C9E94_RS01480;Dbxref=GenBank:WP_001055305.1;Name=WP_001055305.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462592.1;locus_tag=C9E94_RS01480;product=L-lactate permease;protein_id=WP_001055305.1;transl_table=11
NZ_PYJR01000015.1	RefSeq	gene	17114	21499	.	-	.	ID=gene-C9E94_RS01485;Name=sadA;gbkey=Gene;gene=sadA;gene_biotype=protein_coding;locus_tag=C9E94_RS01485;old_locus_tag=C9E94_01520
NZ_PYJR01000015.1	Protein Homology	CDS	17114	21499	.	-	0	ID=cds-WP_135400750.1;Parent=gene-C9E94_RS01485;Dbxref=GenBank:WP_135400750.1;Name=WP_135400750.1;gbkey=CDS;gene=sadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462591.1;locus_tag=C9E94_RS01485;product=trimeric autotransporter adhesin SadA;protein_id=WP_135400750.1;transl_table=11
NZ_PYJR01000015.1	RefSeq	gene	21543	22226	.	-	.	ID=gene-C9E94_RS01490;Name=C9E94_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS01490;old_locus_tag=C9E94_01525
NZ_PYJR01000015.1	Protein Homology	CDS	21543	22226	.	-	0	ID=cds-WP_000549457.1;Parent=gene-C9E94_RS01490;Dbxref=GenBank:WP_000549457.1;Name=WP_000549457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462590.1;locus_tag=C9E94_RS01490;product=DUF3251 domain-containing protein;protein_id=WP_000549457.1;transl_table=11
##sequence-region NZ_PYJR01000138.1 1 22246
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000138.1	RefSeq	region	1	22246	.	+	.	ID=NZ_PYJR01000138.1:1..22246;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000138.1	RefSeq	gene	512	1144	.	+	.	ID=gene-C9E94_RS22585;Name=siiA;gbkey=Gene;gene=siiA;gene_biotype=protein_coding;locus_tag=C9E94_RS22585;old_locus_tag=C9E94_23180
NZ_PYJR01000138.1	Protein Homology	CDS	512	1144	.	+	0	ID=cds-WP_135401248.1;Parent=gene-C9E94_RS22585;Dbxref=GenBank:WP_135401248.1;Name=WP_135401248.1;gbkey=CDS;gene=siiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463122.1;locus_tag=C9E94_RS22585;product=SPI-4 type I secretion system auxiliary protein SiiA;protein_id=WP_135401248.1;transl_table=11
NZ_PYJR01000138.1	RefSeq	gene	1141	2529	.	+	.	ID=gene-C9E94_RS22590;Name=C9E94_RS22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22590;old_locus_tag=C9E94_23185
NZ_PYJR01000138.1	Protein Homology	CDS	1141	2529	.	+	0	ID=cds-WP_135401249.1;Parent=gene-C9E94_RS22590;Dbxref=GenBank:WP_135401249.1;Name=WP_135401249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463123.1;locus_tag=C9E94_RS22590;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_135401249.1;transl_table=11
NZ_PYJR01000138.1	RefSeq	gene	2519	3838	.	+	.	ID=gene-C9E94_RS22595;Name=siiC;gbkey=Gene;gene=siiC;gene_biotype=protein_coding;locus_tag=C9E94_RS22595;old_locus_tag=C9E94_23190
NZ_PYJR01000138.1	Protein Homology	CDS	2519	3838	.	+	0	ID=cds-WP_135401250.1;Parent=gene-C9E94_RS22595;Dbxref=GenBank:WP_135401250.1;Name=WP_135401250.1;gbkey=CDS;gene=siiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463124.1;locus_tag=C9E94_RS22595;product=SPI-4 type I secretion system protein SiiC;protein_id=WP_135401250.1;transl_table=11
NZ_PYJR01000138.1	RefSeq	gene	3835	5112	.	+	.	ID=gene-C9E94_RS22600;Name=siiD;gbkey=Gene;gene=siiD;gene_biotype=protein_coding;locus_tag=C9E94_RS22600;old_locus_tag=C9E94_23195
NZ_PYJR01000138.1	Protein Homology	CDS	3835	5112	.	+	0	ID=cds-WP_001081935.1;Parent=gene-C9E94_RS22600;Dbxref=GenBank:WP_001081935.1;Name=WP_001081935.1;gbkey=CDS;gene=siiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463125.1;locus_tag=C9E94_RS22600;product=SPI-4 type I secretion system protein SiiD;protein_id=WP_001081935.1;transl_table=11
NZ_PYJR01000138.1	RefSeq	gene	5129	21814	.	+	.	ID=gene-C9E94_RS22605;Name=siiE;gbkey=Gene;gene=siiE;gene_biotype=protein_coding;locus_tag=C9E94_RS22605;old_locus_tag=C9E94_23200
NZ_PYJR01000138.1	Protein Homology	CDS	5129	21814	.	+	0	ID=cds-WP_135401251.1;Parent=gene-C9E94_RS22605;Dbxref=GenBank:WP_135401251.1;Name=WP_135401251.1;gbkey=CDS;gene=siiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=C9E94_RS22605;product=non-fimbrial adhesin SiiE;protein_id=WP_135401251.1;transl_table=11
NZ_PYJR01000138.1	RefSeq	gene	21854	22246	.	+	.	ID=gene-C9E94_RS22610;Name=C9E94_RS22610;end_range=22246,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22610;old_locus_tag=C9E94_23205;partial=true
NZ_PYJR01000138.1	Protein Homology	CDS	21854	22246	.	+	0	ID=cds-WP_167853660.1;Parent=gene-C9E94_RS22610;Dbxref=GenBank:WP_167853660.1;Name=WP_167853660.1;end_range=22246,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463127.1;locus_tag=C9E94_RS22610;partial=true;product=hypothetical protein;protein_id=WP_167853660.1;transl_table=11
##sequence-region NZ_PYJR01000108.1 1 20389
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000108.1	RefSeq	region	1	20389	.	+	.	ID=NZ_PYJR01000108.1:1..20389;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000108.1	RefSeq	gene	245	1273	.	-	.	ID=gene-C9E94_RS16405;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=C9E94_RS16405;old_locus_tag=C9E94_16795
NZ_PYJR01000108.1	Protein Homology	CDS	245	1273	.	-	0	ID=cds-WP_115276228.1;Parent=gene-C9E94_RS16405;Dbxref=GenBank:WP_115276228.1;Name=WP_115276228.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=C9E94_RS16405;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_115276228.1;transl_table=11
NZ_PYJR01000108.1	RefSeq	gene	1376	1813	.	+	.	ID=gene-C9E94_RS16410;Name=C9E94_RS16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16410;old_locus_tag=C9E94_16800
NZ_PYJR01000108.1	Protein Homology	CDS	1376	1813	.	+	0	ID=cds-WP_000203998.1;Parent=gene-C9E94_RS16410;Dbxref=GenBank:WP_000203998.1;Name=WP_000203998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463413.1;locus_tag=C9E94_RS16410;product=DNA polymerase III subunit psi;protein_id=WP_000203998.1;transl_table=11
NZ_PYJR01000108.1	RefSeq	gene	1758	2204	.	+	.	ID=gene-C9E94_RS16415;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=C9E94_RS16415;old_locus_tag=C9E94_16805
NZ_PYJR01000108.1	Protein Homology	CDS	1758	2204	.	+	0	ID=cds-WP_001092435.1;Parent=gene-C9E94_RS16415;Dbxref=GenBank:WP_001092435.1;Name=WP_001092435.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463414.1;locus_tag=C9E94_RS16415;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001092435.1;transl_table=11
NZ_PYJR01000108.1	RefSeq	gene	2226	2903	.	+	.	ID=gene-C9E94_RS16420;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=C9E94_RS16420;old_locus_tag=C9E94_16810
NZ_PYJR01000108.1	Protein Homology	CDS	2226	2903	.	+	0	ID=cds-WP_000870686.1;Parent=gene-C9E94_RS16420;Dbxref=GenBank:WP_000870686.1;Name=WP_000870686.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=C9E94_RS16420;product=pyrimidine 5'-nucleotidase;protein_id=WP_000870686.1;transl_table=11
NZ_PYJR01000108.1	RefSeq	gene	2995	4584	.	+	.	ID=gene-C9E94_RS16425;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=C9E94_RS16425;old_locus_tag=C9E94_16815
NZ_PYJR01000108.1	Protein Homology	CDS	2995	4584	.	+	0	ID=cds-WP_000175966.1;Parent=gene-C9E94_RS16425;Dbxref=GenBank:WP_000175966.1;Name=WP_000175966.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=C9E94_RS16425;product=peptide chain release factor 3;protein_id=WP_000175966.1;transl_table=11
NZ_PYJR01000108.1	RefSeq	gene	4986	5603	.	+	.	ID=gene-C9E94_RS16430;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=C9E94_RS16430;old_locus_tag=C9E94_16820
NZ_PYJR01000108.1	Protein Homology	CDS	4986	5603	.	+	0	ID=cds-WP_000178963.1;Parent=gene-C9E94_RS16430;Dbxref=GenBank:WP_000178963.1;Name=WP_000178963.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463417.1;locus_tag=C9E94_RS16430;product=molecular chaperone OsmY;protein_id=WP_000178963.1;transl_table=11
NZ_PYJR01000108.1	RefSeq	gene	5732	5893	.	+	.	ID=gene-C9E94_RS16435;Name=C9E94_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16435;old_locus_tag=C9E94_16825
NZ_PYJR01000108.1	Protein Homology	CDS	5732	5893	.	+	0	ID=cds-WP_000490276.1;Parent=gene-C9E94_RS16435;Dbxref=GenBank:WP_000490276.1;Name=WP_000490276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=C9E94_RS16435;product=DUF1328 domain-containing protein;protein_id=WP_000490276.1;transl_table=11
NZ_PYJR01000108.1	RefSeq	gene	6017	7090	.	+	.	ID=gene-C9E94_RS16440;Name=C9E94_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16440;old_locus_tag=C9E94_16830
NZ_PYJR01000108.1	Protein Homology	CDS	6017	7090	.	+	0	ID=cds-WP_000531546.1;Parent=gene-C9E94_RS16440;Dbxref=GenBank:WP_000531546.1;Name=WP_000531546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463419.1;locus_tag=C9E94_RS16440;product=patatin-like phospholipase family protein;protein_id=WP_000531546.1;transl_table=11
NZ_PYJR01000108.1	RefSeq	gene	7087	7860	.	+	.	ID=gene-C9E94_RS16445;Name=C9E94_RS16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16445;old_locus_tag=C9E94_16835
NZ_PYJR01000108.1	Protein Homology	CDS	7087	7860	.	+	0	ID=cds-WP_058653125.1;Parent=gene-C9E94_RS16445;Dbxref=GenBank:WP_058653125.1;Name=WP_058653125.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463420.1;locus_tag=C9E94_RS16445;product=metal-dependent hydrolase;protein_id=WP_058653125.1;transl_table=11
NZ_PYJR01000108.1	RefSeq	gene	7893	8756	.	-	.	ID=gene-C9E94_RS16450;Name=C9E94_RS16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16450;old_locus_tag=C9E94_16840
NZ_PYJR01000108.1	Protein Homology	CDS	7893	8756	.	-	0	ID=cds-WP_001064941.1;Parent=gene-C9E94_RS16450;Dbxref=GenBank:WP_001064941.1;Name=WP_001064941.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463421.1;locus_tag=C9E94_RS16450;product=YjjW family glycine radical enzyme activase;protein_id=WP_001064941.1;transl_table=11
NZ_PYJR01000108.1	RefSeq	gene	8728	10278	.	-	.	ID=gene-C9E94_RS16455;Name=C9E94_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16455;old_locus_tag=C9E94_16845
NZ_PYJR01000108.1	Protein Homology	CDS	8728	10278	.	-	0	ID=cds-WP_135401135.1;Parent=gene-C9E94_RS16455;Dbxref=GenBank:WP_135401135.1;Name=WP_135401135.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463422.1;locus_tag=C9E94_RS16455;product=YjjI family glycine radical enzyme;protein_id=WP_135401135.1;transl_table=11
NZ_PYJR01000108.1	RefSeq	gene	10538	11317	.	+	.	ID=gene-C9E94_RS16460;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=C9E94_RS16460;old_locus_tag=C9E94_16850
NZ_PYJR01000108.1	Protein Homology	CDS	10538	11317	.	+	0	ID=cds-WP_001519713.1;Parent=gene-C9E94_RS16460;Dbxref=GenBank:WP_001519713.1;Name=WP_001519713.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=C9E94_RS16460;product=deoxyribose-phosphate aldolase;protein_id=WP_001519713.1;transl_table=11
NZ_PYJR01000108.1	RefSeq	gene	11441	12763	.	+	.	ID=gene-C9E94_RS16465;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=C9E94_RS16465;old_locus_tag=C9E94_16855
NZ_PYJR01000108.1	Protein Homology	CDS	11441	12763	.	+	0	ID=cds-WP_000477844.1;Parent=gene-C9E94_RS16465;Dbxref=GenBank:WP_000477844.1;Name=WP_000477844.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=C9E94_RS16465;product=thymidine phosphorylase;protein_id=WP_000477844.1;transl_table=11
NZ_PYJR01000108.1	RefSeq	gene	12815	14038	.	+	.	ID=gene-C9E94_RS16470;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=C9E94_RS16470;old_locus_tag=C9E94_16860
NZ_PYJR01000108.1	Protein Homology	CDS	12815	14038	.	+	0	ID=cds-WP_000816459.1;Parent=gene-C9E94_RS16470;Dbxref=GenBank:WP_000816459.1;Name=WP_000816459.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463425.1;locus_tag=C9E94_RS16470;product=phosphopentomutase;protein_id=WP_000816459.1;transl_table=11
NZ_PYJR01000108.1	RefSeq	gene	14248	14967	.	+	.	ID=gene-C9E94_RS16475;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=C9E94_RS16475;old_locus_tag=C9E94_16865
NZ_PYJR01000108.1	Protein Homology	CDS	14248	14967	.	+	0	ID=cds-WP_000224870.1;Parent=gene-C9E94_RS16475;Dbxref=GenBank:WP_000224870.1;Name=WP_000224870.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463426.1;locus_tag=C9E94_RS16475;product=purine-nucleoside phosphorylase;protein_id=WP_000224870.1;transl_table=11
NZ_PYJR01000108.1	RefSeq	gene	15005	15577	.	-	.	ID=gene-C9E94_RS16480;Name=C9E94_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16480;old_locus_tag=C9E94_16870
NZ_PYJR01000108.1	Protein Homology	CDS	15005	15577	.	-	0	ID=cds-WP_000841604.1;Parent=gene-C9E94_RS16480;Dbxref=GenBank:WP_000841604.1;Name=WP_000841604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463427.1;locus_tag=C9E94_RS16480;product=outer membrane protein;protein_id=WP_000841604.1;transl_table=11
NZ_PYJR01000108.1	RefSeq	gene	15574	17982	.	-	.	ID=gene-C9E94_RS16485;Name=C9E94_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16485;old_locus_tag=C9E94_16875
NZ_PYJR01000108.1	Protein Homology	CDS	15574	17982	.	-	0	ID=cds-WP_000876244.1;Parent=gene-C9E94_RS16485;Dbxref=GenBank:WP_000876244.1;Name=WP_000876244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463428.1;locus_tag=C9E94_RS16485;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_000876244.1;transl_table=11
NZ_PYJR01000108.1	RefSeq	gene	17996	18703	.	-	.	ID=gene-C9E94_RS16490;Name=stjC;gbkey=Gene;gene=stjC;gene_biotype=protein_coding;locus_tag=C9E94_RS16490;old_locus_tag=C9E94_16880
NZ_PYJR01000108.1	Protein Homology	CDS	17996	18703	.	-	0	ID=cds-WP_001112036.1;Parent=gene-C9E94_RS16490;Dbxref=GenBank:WP_001112036.1;Name=WP_001112036.1;gbkey=CDS;gene=stjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463429.1;locus_tag=C9E94_RS16490;product=fimbrial biogenesis chaperone StjC;protein_id=WP_001112036.1;transl_table=11
NZ_PYJR01000108.1	RefSeq	gene	18781	19470	.	-	.	ID=gene-C9E94_RS16495;Name=C9E94_RS16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16495;old_locus_tag=C9E94_16885
NZ_PYJR01000108.1	Protein Homology	CDS	18781	19470	.	-	0	ID=cds-WP_000722276.1;Parent=gene-C9E94_RS16495;Dbxref=GenBank:WP_000722276.1;Name=WP_000722276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463430.1;locus_tag=C9E94_RS16495;product=DUF1120 domain-containing protein;protein_id=WP_000722276.1;transl_table=11
NZ_PYJR01000108.1	RefSeq	gene	19518	20207	.	-	.	ID=gene-C9E94_RS16500;Name=C9E94_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16500;old_locus_tag=C9E94_16890
NZ_PYJR01000108.1	Protein Homology	CDS	19518	20207	.	-	0	ID=cds-WP_000734706.1;Parent=gene-C9E94_RS16500;Dbxref=GenBank:WP_000734706.1;Name=WP_000734706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463431.1;locus_tag=C9E94_RS16500;product=DUF1120 domain-containing protein;protein_id=WP_000734706.1;transl_table=11
##sequence-region NZ_PYJR01000054.1 1 18992
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000054.1	RefSeq	region	1	18992	.	+	.	ID=NZ_PYJR01000054.1:1..18992;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000054.1	RefSeq	gene	1	297	.	-	.	ID=gene-C9E94_RS07215;Name=C9E94_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07215;old_locus_tag=C9E94_07390;partial=true;start_range=.,1
NZ_PYJR01000054.1	Protein Homology	CDS	1	297	.	-	0	ID=cds-WP_255123228.1;Parent=gene-C9E94_RS07215;Dbxref=GenBank:WP_255123228.1;Name=WP_255123228.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001710681.1;locus_tag=C9E94_RS07215;partial=true;product=serine acetyltransferase;protein_id=WP_255123228.1;start_range=.,1;transl_table=11
NZ_PYJR01000054.1	RefSeq	pseudogene	274	500	.	-	.	ID=gene-C9E94_RS23590;Name=C9E94_RS23590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23590;partial=true;pseudo=true;start_range=.,274
NZ_PYJR01000054.1	Protein Homology	CDS	274	500	.	-	0	ID=cds-C9E94_RS23590;Parent=gene-C9E94_RS23590;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463062.1;locus_tag=C9E94_RS23590;partial=true;product=hypothetical protein;pseudo=true;start_range=.,274;transl_table=11
NZ_PYJR01000054.1	RefSeq	gene	753	1208	.	-	.	ID=gene-C9E94_RS07220;Name=C9E94_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07220;old_locus_tag=C9E94_07395
NZ_PYJR01000054.1	Protein Homology	CDS	753	1208	.	-	0	ID=cds-WP_023180991.1;Parent=gene-C9E94_RS07220;Dbxref=GenBank:WP_023180991.1;Name=WP_023180991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463063.1;locus_tag=C9E94_RS07220;product=hypothetical protein;protein_id=WP_023180991.1;transl_table=11
NZ_PYJR01000054.1	RefSeq	gene	1205	1906	.	-	.	ID=gene-C9E94_RS07225;Name=C9E94_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07225;old_locus_tag=C9E94_07400
NZ_PYJR01000054.1	Protein Homology	CDS	1205	1906	.	-	0	ID=cds-WP_039589946.1;Parent=gene-C9E94_RS07225;Dbxref=GenBank:WP_039589946.1;Name=WP_039589946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000493811.1;locus_tag=C9E94_RS07225;product=DUF4376 domain-containing protein;protein_id=WP_039589946.1;transl_table=11
NZ_PYJR01000054.1	RefSeq	gene	2091	3368	.	-	.	ID=gene-C9E94_RS07230;Name=C9E94_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07230;old_locus_tag=C9E94_07405
NZ_PYJR01000054.1	Protein Homology	CDS	2091	3368	.	-	0	ID=cds-WP_255123226.1;Parent=gene-C9E94_RS07230;Dbxref=GenBank:WP_255123226.1;Name=WP_255123226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368194.1;locus_tag=C9E94_RS07230;product=phage tail protein;protein_id=WP_255123226.1;transl_table=11
NZ_PYJR01000054.1	RefSeq	gene	3371	4003	.	-	.	ID=gene-C9E94_RS07235;Name=C9E94_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07235;old_locus_tag=C9E94_07410
NZ_PYJR01000054.1	Protein Homology	CDS	3371	4003	.	-	0	ID=cds-WP_000359504.1;Parent=gene-C9E94_RS07235;Dbxref=GenBank:WP_000359504.1;Name=WP_000359504.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463066.1;locus_tag=C9E94_RS07235;product=phage tail protein I;protein_id=WP_000359504.1;transl_table=11
NZ_PYJR01000054.1	RefSeq	gene	3996	5111	.	-	.	ID=gene-C9E94_RS07240;Name=C9E94_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07240;old_locus_tag=C9E94_07415
NZ_PYJR01000054.1	Protein Homology	CDS	3996	5111	.	-	0	ID=cds-WP_079787164.1;Parent=gene-C9E94_RS07240;Dbxref=GenBank:WP_079787164.1;Name=WP_079787164.1;Ontology_term=GO:0098045,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_process=virus baseplate assembly|0098045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463067.1;locus_tag=C9E94_RS07240;product=baseplate assembly protein;protein_id=WP_079787164.1;transl_table=11
NZ_PYJR01000054.1	RefSeq	gene	5102	5461	.	-	.	ID=gene-C9E94_RS07245;Name=C9E94_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07245;old_locus_tag=C9E94_07420
NZ_PYJR01000054.1	Protein Homology	CDS	5102	5461	.	-	0	ID=cds-WP_001093501.1;Parent=gene-C9E94_RS07245;Dbxref=GenBank:WP_001093501.1;Name=WP_001093501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463068.1;locus_tag=C9E94_RS07245;product=GPW/gp25 family protein;protein_id=WP_001093501.1;transl_table=11
NZ_PYJR01000054.1	RefSeq	gene	5625	7172	.	-	.	ID=gene-C9E94_RS07250;Name=C9E94_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07250;old_locus_tag=C9E94_07425
NZ_PYJR01000054.1	Protein Homology	CDS	5625	7172	.	-	0	ID=cds-WP_058653622.1;Parent=gene-C9E94_RS07250;Dbxref=GenBank:WP_058653622.1;Name=WP_058653622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463069.1;locus_tag=C9E94_RS07250;product=DUF6056 family protein;protein_id=WP_058653622.1;transl_table=11
NZ_PYJR01000054.1	RefSeq	gene	7172	8101	.	-	.	ID=gene-C9E94_RS07255;Name=C9E94_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07255;old_locus_tag=C9E94_07430
NZ_PYJR01000054.1	Protein Homology	CDS	7172	8101	.	-	0	ID=cds-WP_135400899.1;Parent=gene-C9E94_RS07255;Dbxref=GenBank:WP_135400899.1;Name=WP_135400899.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463070.1;locus_tag=C9E94_RS07255;product=glycosyltransferase family 2 protein;protein_id=WP_135400899.1;transl_table=11
NZ_PYJR01000054.1	RefSeq	gene	8098	8460	.	-	.	ID=gene-C9E94_RS07260;Name=C9E94_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07260;old_locus_tag=C9E94_07435
NZ_PYJR01000054.1	Protein Homology	CDS	8098	8460	.	-	0	ID=cds-WP_000593182.1;Parent=gene-C9E94_RS07260;Dbxref=GenBank:WP_000593182.1;Name=WP_000593182.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463071.1;locus_tag=C9E94_RS07260;product=GtrA family protein;protein_id=WP_000593182.1;transl_table=11
NZ_PYJR01000054.1	RefSeq	gene	8788	9510	.	-	.	ID=gene-C9E94_RS07265;Name=C9E94_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07265;old_locus_tag=C9E94_07440
NZ_PYJR01000054.1	Protein Homology	CDS	8788	9510	.	-	0	ID=cds-WP_000679393.1;Parent=gene-C9E94_RS07265;Dbxref=GenBank:WP_000679393.1;Name=WP_000679393.1;Ontology_term=GO:0098003,GO:0046872,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_function=metal ion binding|0046872||IEA;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463072.1;locus_tag=C9E94_RS07265;product=phage baseplate assembly protein V;protein_id=WP_000679393.1;transl_table=11
NZ_PYJR01000054.1	RefSeq	gene	9520	10563	.	-	.	ID=gene-C9E94_RS07270;Name=C9E94_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07270;old_locus_tag=C9E94_07445
NZ_PYJR01000054.1	Protein Homology	CDS	9520	10563	.	-	0	ID=cds-WP_000818155.1;Parent=gene-C9E94_RS07270;Dbxref=GenBank:WP_000818155.1;Name=WP_000818155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463073.1;locus_tag=C9E94_RS07270;product=phage late control D family protein;protein_id=WP_000818155.1;transl_table=11
NZ_PYJR01000054.1	RefSeq	gene	10551	10760	.	-	.	ID=gene-C9E94_RS07275;Name=C9E94_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07275;old_locus_tag=C9E94_07450
NZ_PYJR01000054.1	Protein Homology	CDS	10551	10760	.	-	0	ID=cds-WP_001269716.1;Parent=gene-C9E94_RS07275;Dbxref=GenBank:WP_001269716.1;Name=WP_001269716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463074.1;locus_tag=C9E94_RS07275;product=tail protein X;protein_id=WP_001269716.1;transl_table=11
NZ_PYJR01000054.1	RefSeq	gene	10760	11713	.	-	.	ID=gene-C9E94_RS07280;Name=C9E94_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07280;old_locus_tag=C9E94_07455
NZ_PYJR01000054.1	Protein Homology	CDS	10760	11713	.	-	0	ID=cds-WP_000271425.1;Parent=gene-C9E94_RS07280;Dbxref=GenBank:WP_000271425.1;Name=WP_000271425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463075.1;locus_tag=C9E94_RS07280;product=phage tail protein;protein_id=WP_000271425.1;transl_table=11
NZ_PYJR01000054.1	RefSeq	gene	11713	14067	.	-	.	ID=gene-C9E94_RS07285;Name=C9E94_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07285;old_locus_tag=C9E94_07460
NZ_PYJR01000054.1	Protein Homology	CDS	11713	14067	.	-	0	ID=cds-WP_135400900.1;Parent=gene-C9E94_RS07285;Dbxref=GenBank:WP_135400900.1;Name=WP_135400900.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463076.1;locus_tag=C9E94_RS07285;product=phage tail tape measure protein;protein_id=WP_135400900.1;transl_table=11
NZ_PYJR01000054.1	RefSeq	gene	14164	14292	.	-	.	ID=gene-C9E94_RS23790;Name=C9E94_RS23790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23790;old_locus_tag=C9E94_07465
NZ_PYJR01000054.1	Protein Homology	CDS	14164	14292	.	-	0	ID=cds-WP_001185655.1;Parent=gene-C9E94_RS23790;Dbxref=GenBank:WP_001185655.1;Name=WP_001185655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728452.1;locus_tag=C9E94_RS23790;product=GpE family phage tail protein;protein_id=WP_001185655.1;transl_table=11
NZ_PYJR01000054.1	RefSeq	gene	14252	14569	.	-	.	ID=gene-C9E94_RS07295;Name=C9E94_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07295;old_locus_tag=C9E94_07470
NZ_PYJR01000054.1	Protein Homology	CDS	14252	14569	.	-	0	ID=cds-WP_135400901.1;Parent=gene-C9E94_RS07295;Dbxref=GenBank:WP_135400901.1;Name=WP_135400901.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001003637.1;locus_tag=C9E94_RS07295;product=phage tail assembly protein;protein_id=WP_135400901.1;transl_table=11
NZ_PYJR01000054.1	RefSeq	gene	14621	15145	.	-	.	ID=gene-C9E94_RS07300;Name=C9E94_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07300;old_locus_tag=C9E94_07475
NZ_PYJR01000054.1	Protein Homology	CDS	14621	15145	.	-	0	ID=cds-WP_020437575.1;Parent=gene-C9E94_RS07300;Dbxref=GenBank:WP_020437575.1;Name=WP_020437575.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463077.1;locus_tag=C9E94_RS07300;product=phage major tail tube protein;protein_id=WP_020437575.1;transl_table=11
NZ_PYJR01000054.1	RefSeq	gene	15145	16572	.	-	.	ID=gene-C9E94_RS07305;Name=C9E94_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07305;old_locus_tag=C9E94_07480
NZ_PYJR01000054.1	Protein Homology	CDS	15145	16572	.	-	0	ID=cds-WP_000729853.1;Parent=gene-C9E94_RS07305;Dbxref=GenBank:WP_000729853.1;Name=WP_000729853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463078.1;locus_tag=C9E94_RS07305;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_000729853.1;transl_table=11
NZ_PYJR01000054.1	RefSeq	gene	16562	16759	.	-	.	ID=gene-C9E94_RS07310;Name=C9E94_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07310;old_locus_tag=C9E94_07485
NZ_PYJR01000054.1	Protein Homology	CDS	16562	16759	.	-	0	ID=cds-WP_000875314.1;Parent=gene-C9E94_RS07310;Dbxref=GenBank:WP_000875314.1;Name=WP_000875314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463079.1;locus_tag=C9E94_RS07310;product=hypothetical protein;protein_id=WP_000875314.1;transl_table=11
NZ_PYJR01000054.1	RefSeq	gene	16756	17211	.	-	.	ID=gene-C9E94_RS07315;Name=C9E94_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07315;old_locus_tag=C9E94_07490
NZ_PYJR01000054.1	Protein Homology	CDS	16756	17211	.	-	0	ID=cds-WP_000449433.1;Parent=gene-C9E94_RS07315;Dbxref=GenBank:WP_000449433.1;Name=WP_000449433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463080.1;locus_tag=C9E94_RS07315;product=Gp37 family protein;protein_id=WP_000449433.1;transl_table=11
NZ_PYJR01000054.1	RefSeq	gene	17371	17685	.	-	.	ID=gene-C9E94_RS07320;Name=C9E94_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07320;old_locus_tag=C9E94_07495
NZ_PYJR01000054.1	Protein Homology	CDS	17371	17685	.	-	0	ID=cds-WP_000777266.1;Parent=gene-C9E94_RS07320;Dbxref=GenBank:WP_000777266.1;Name=WP_000777266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463081.1;locus_tag=C9E94_RS07320;product=membrane protein;protein_id=WP_000777266.1;transl_table=11
NZ_PYJR01000054.1	RefSeq	gene	17698	18303	.	-	.	ID=gene-C9E94_RS07325;Name=C9E94_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07325;old_locus_tag=C9E94_07500
NZ_PYJR01000054.1	Protein Homology	CDS	17698	18303	.	-	0	ID=cds-WP_001270441.1;Parent=gene-C9E94_RS07325;Dbxref=GenBank:WP_001270441.1;Name=WP_001270441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463082.1;locus_tag=C9E94_RS07325;product=lytic transglycosylase domain-containing protein;protein_id=WP_001270441.1;transl_table=11
NZ_PYJR01000054.1	RefSeq	gene	18306	18593	.	-	.	ID=gene-C9E94_RS07330;Name=C9E94_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07330;old_locus_tag=C9E94_07505
NZ_PYJR01000054.1	Protein Homology	CDS	18306	18593	.	-	0	ID=cds-WP_001226442.1;Parent=gene-C9E94_RS07330;Dbxref=GenBank:WP_001226442.1;Name=WP_001226442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463083.1;locus_tag=C9E94_RS07330;product=putative holin;protein_id=WP_001226442.1;transl_table=11
##sequence-region NZ_PYJR01000045.1 1 18537
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000045.1	RefSeq	region	1	18537	.	+	.	ID=NZ_PYJR01000045.1:1..18537;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000045.1	RefSeq	gene	378	1967	.	+	.	ID=gene-C9E94_RS05350;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=C9E94_RS05350;old_locus_tag=C9E94_05495
NZ_PYJR01000045.1	Protein Homology	CDS	378	1967	.	+	0	ID=cds-WP_135400855.1;Parent=gene-C9E94_RS05350;Dbxref=GenBank:WP_135400855.1;Name=WP_135400855.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=C9E94_RS05350;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_135400855.1;transl_table=11
NZ_PYJR01000045.1	RefSeq	gene	1983	3272	.	+	.	ID=gene-C9E94_RS05355;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=C9E94_RS05355;old_locus_tag=C9E94_05500
NZ_PYJR01000045.1	Protein Homology	CDS	1983	3272	.	+	0	ID=cds-WP_080170058.1;Parent=gene-C9E94_RS05355;Dbxref=GenBank:WP_080170058.1;Name=WP_080170058.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463044.1;locus_tag=C9E94_RS05355;product=phosphoribosylamine--glycine ligase;protein_id=WP_080170058.1;transl_table=11
NZ_PYJR01000045.1	RefSeq	gene	3269	4594	.	-	.	ID=gene-C9E94_RS05360;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=C9E94_RS05360;old_locus_tag=C9E94_05505
NZ_PYJR01000045.1	Protein Homology	CDS	3269	4594	.	-	0	ID=cds-WP_079942369.1;Parent=gene-C9E94_RS05360;Dbxref=GenBank:WP_079942369.1;Name=WP_079942369.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463043.1;locus_tag=C9E94_RS05360;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_079942369.1;transl_table=11
NZ_PYJR01000045.1	RefSeq	gene	4600	5997	.	-	.	ID=gene-C9E94_RS05365;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=C9E94_RS05365;old_locus_tag=C9E94_05510
NZ_PYJR01000045.1	Protein Homology	CDS	4600	5997	.	-	0	ID=cds-WP_079943808.1;Parent=gene-C9E94_RS05365;Dbxref=GenBank:WP_079943808.1;Name=WP_079943808.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463042.1;locus_tag=C9E94_RS05365;product=two-component system sensor histidine kinase ZraS;protein_id=WP_079943808.1;transl_table=11
NZ_PYJR01000045.1	RefSeq	gene	6246	6701	.	+	.	ID=gene-C9E94_RS05370;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=C9E94_RS05370;old_locus_tag=C9E94_05515
NZ_PYJR01000045.1	Protein Homology	CDS	6246	6701	.	+	0	ID=cds-WP_000828129.1;Parent=gene-C9E94_RS05370;Dbxref=GenBank:WP_000828129.1;Name=WP_000828129.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463041.1;locus_tag=C9E94_RS05370;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_000828129.1;transl_table=11
NZ_PYJR01000045.1	RefSeq	gene	6743	7435	.	-	.	ID=gene-C9E94_RS05375;Name=C9E94_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05375;old_locus_tag=C9E94_05520
NZ_PYJR01000045.1	Protein Homology	CDS	6743	7435	.	-	0	ID=cds-WP_001083940.1;Parent=gene-C9E94_RS05375;Dbxref=GenBank:WP_001083940.1;Name=WP_001083940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463040.1;locus_tag=C9E94_RS05375;product=DUF1481 domain-containing protein;protein_id=WP_001083940.1;transl_table=11
NZ_PYJR01000045.1	RefSeq	gene	7447	7719	.	-	.	ID=gene-C9E94_RS05380;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=C9E94_RS05380;old_locus_tag=C9E94_05525
NZ_PYJR01000045.1	Protein Homology	CDS	7447	7719	.	-	0	ID=cds-WP_001044509.1;Parent=gene-C9E94_RS05380;Dbxref=GenBank:WP_001044509.1;Name=WP_001044509.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=C9E94_RS05380;product=nucleoid-associated protein HU-alpha;protein_id=WP_001044509.1;transl_table=11
NZ_PYJR01000045.1	RefSeq	gene	7906	8496	.	-	.	ID=gene-C9E94_RS05385;Name=C9E94_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05385;old_locus_tag=C9E94_05530
NZ_PYJR01000045.1	Protein Homology	CDS	7906	8496	.	-	0	ID=cds-WP_000940092.1;Parent=gene-C9E94_RS05385;Dbxref=GenBank:WP_000940092.1;Name=WP_000940092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463038.1;locus_tag=C9E94_RS05385;product=YjaG family protein;protein_id=WP_000940092.1;transl_table=11
NZ_PYJR01000045.1	RefSeq	gene	8538	9209	.	-	.	ID=gene-C9E94_RS05390;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=C9E94_RS05390;old_locus_tag=C9E94_05535
NZ_PYJR01000045.1	Protein Homology	CDS	8538	9209	.	-	0	ID=cds-WP_135400856.1;Parent=gene-C9E94_RS05390;Dbxref=GenBank:WP_135400856.1;Name=WP_135400856.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463037.1;locus_tag=C9E94_RS05390;product=deoxyribonuclease V;protein_id=WP_135400856.1;transl_table=11
NZ_PYJR01000045.1	RefSeq	gene	9219	10283	.	-	.	ID=gene-C9E94_RS05395;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=C9E94_RS05395;old_locus_tag=C9E94_05540
NZ_PYJR01000045.1	Protein Homology	CDS	9219	10283	.	-	0	ID=cds-WP_000137623.1;Parent=gene-C9E94_RS05395;Dbxref=GenBank:WP_000137623.1;Name=WP_000137623.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463036.2;locus_tag=C9E94_RS05395;product=uroporphyrinogen decarboxylase;protein_id=WP_000137623.1;transl_table=11
NZ_PYJR01000045.1	RefSeq	gene	10324	11097	.	-	.	ID=gene-C9E94_RS05400;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=C9E94_RS05400;old_locus_tag=C9E94_05545
NZ_PYJR01000045.1	Protein Homology	CDS	10324	11097	.	-	0	ID=cds-WP_000373960.1;Parent=gene-C9E94_RS05400;Dbxref=GenBank:WP_000373960.1;Name=WP_000373960.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463035.1;locus_tag=C9E94_RS05400;product=NAD(+) diphosphatase;protein_id=WP_000373960.1;transl_table=11
NZ_PYJR01000045.1	RefSeq	gene	11190	11678	.	+	.	ID=gene-C9E94_RS05405;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=C9E94_RS05405;old_locus_tag=C9E94_05550
NZ_PYJR01000045.1	Protein Homology	CDS	11190	11678	.	+	0	ID=cds-WP_000934317.1;Parent=gene-C9E94_RS05405;Dbxref=GenBank:WP_000934317.1;Name=WP_000934317.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463034.1;locus_tag=C9E94_RS05405;product=sigma D regulator;protein_id=WP_000934317.1;transl_table=11
NZ_PYJR01000045.1	RefSeq	gene	12042	13937	.	+	.	ID=gene-C9E94_RS05410;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=C9E94_RS05410;old_locus_tag=C9E94_05555
NZ_PYJR01000045.1	Protein Homology	CDS	12042	13937	.	+	0	ID=cds-WP_135400857.1;Parent=gene-C9E94_RS05410;Dbxref=GenBank:WP_135400857.1;Name=WP_135400857.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463033.1;locus_tag=C9E94_RS05410;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_135400857.1;transl_table=11
NZ_PYJR01000045.1	RefSeq	gene	13937	14572	.	+	.	ID=gene-C9E94_RS05415;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=C9E94_RS05415;old_locus_tag=C9E94_05560
NZ_PYJR01000045.1	Protein Homology	CDS	13937	14572	.	+	0	ID=cds-WP_000284629.1;Parent=gene-C9E94_RS05415;Dbxref=GenBank:WP_000284629.1;Name=WP_000284629.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463032.1;locus_tag=C9E94_RS05415;product=thiamine phosphate synthase;protein_id=WP_000284629.1;transl_table=11
NZ_PYJR01000045.1	RefSeq	gene	14565	15323	.	+	.	ID=gene-C9E94_RS05420;Name=C9E94_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05420;old_locus_tag=C9E94_05565
NZ_PYJR01000045.1	Protein Homology	CDS	14565	15323	.	+	0	ID=cds-WP_000999771.1;Parent=gene-C9E94_RS05420;Dbxref=GenBank:WP_000999771.1;Name=WP_000999771.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463031.1;locus_tag=C9E94_RS05420;product=HesA/MoeB/ThiF family protein;protein_id=WP_000999771.1;transl_table=11
NZ_PYJR01000045.1	RefSeq	gene	15304	15504	.	+	.	ID=gene-C9E94_RS05425;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=C9E94_RS05425;old_locus_tag=C9E94_05570
NZ_PYJR01000045.1	Protein Homology	CDS	15304	15504	.	+	0	ID=cds-WP_001166847.1;Parent=gene-C9E94_RS05425;Dbxref=GenBank:WP_001166847.1;Name=WP_001166847.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463030.1;locus_tag=C9E94_RS05425;product=sulfur carrier protein ThiS;protein_id=WP_001166847.1;transl_table=11
NZ_PYJR01000045.1	RefSeq	gene	15506	16276	.	+	.	ID=gene-C9E94_RS05430;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=C9E94_RS05430;old_locus_tag=C9E94_05575
NZ_PYJR01000045.1	Protein Homology	CDS	15506	16276	.	+	0	ID=cds-WP_000944074.1;Parent=gene-C9E94_RS05430;Dbxref=GenBank:WP_000944074.1;Name=WP_000944074.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463029.1;locus_tag=C9E94_RS05430;product=thiazole synthase;protein_id=WP_000944074.1;transl_table=11
NZ_PYJR01000045.1	RefSeq	gene	16273	17406	.	+	.	ID=gene-C9E94_RS05435;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=C9E94_RS05435;old_locus_tag=C9E94_05580
NZ_PYJR01000045.1	Protein Homology	CDS	16273	17406	.	+	0	ID=cds-WP_135400858.1;Parent=gene-C9E94_RS05435;Dbxref=GenBank:WP_135400858.1;Name=WP_135400858.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463028.1;locus_tag=C9E94_RS05435;product=2-iminoacetate synthase ThiH;protein_id=WP_135400858.1;transl_table=11
NZ_PYJR01000045.1	RefSeq	pseudogene	17560	17745	.	-	.	ID=gene-C9E94_RS05440;Name=C9E94_RS05440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS05440;old_locus_tag=C9E94_05585;partial=true;pseudo=true;start_range=.,17560
NZ_PYJR01000045.1	Protein Homology	CDS	17560	17745	.	-	0	ID=cds-C9E94_RS05440;Parent=gene-C9E94_RS05440;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463027.1;locus_tag=C9E94_RS05440;partial=true;product=hypothetical protein;pseudo=true;start_range=.,17560;transl_table=11
NZ_PYJR01000045.1	RefSeq	pseudogene	17728	17835	.	+	.	ID=gene-C9E94_RS23860;Name=C9E94_RS23860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23860;partial=true;pseudo=true;start_range=.,17728
NZ_PYJR01000045.1	Protein Homology	CDS	17728	17835	.	+	0	ID=cds-C9E94_RS23860;Parent=gene-C9E94_RS23860;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=C9E94_RS23860;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,17728;transl_table=11
NZ_PYJR01000045.1	RefSeq	gene	18158	18502	.	+	.	ID=gene-C9E94_RS05450;Name=C9E94_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS05450;old_locus_tag=C9E94_05595
NZ_PYJR01000045.1	Protein Homology	CDS	18158	18502	.	+	0	ID=cds-WP_023602515.1;Parent=gene-C9E94_RS05450;Dbxref=GenBank:WP_023602515.1;Name=WP_023602515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463025.1;locus_tag=C9E94_RS05450;product=hypothetical protein;protein_id=WP_023602515.1;transl_table=11
##sequence-region NZ_PYJR01000135.1 1 121536
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000135.1	RefSeq	region	1	121536	.	+	.	ID=NZ_PYJR01000135.1:1..121536;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000135.1	RefSeq	gene	360	3233	.	-	.	ID=gene-C9E94_RS21645;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=C9E94_RS21645;old_locus_tag=C9E94_22195
NZ_PYJR01000135.1	Protein Homology	CDS	360	3233	.	-	0	ID=cds-WP_001626633.1;Parent=gene-C9E94_RS21645;Dbxref=GenBank:WP_001626633.1;Name=WP_001626633.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461969.1;locus_tag=C9E94_RS21645;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_001626633.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	3396	3785	.	-	.	ID=gene-C9E94_RS21650;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=C9E94_RS21650;old_locus_tag=C9E94_22200
NZ_PYJR01000135.1	Protein Homology	CDS	3396	3785	.	-	0	ID=cds-WP_001295377.1;Parent=gene-C9E94_RS21650;Dbxref=GenBank:WP_001295377.1;Name=WP_001295377.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=C9E94_RS21650;product=glycine cleavage system protein GcvH;protein_id=WP_001295377.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	3811	4905	.	-	.	ID=gene-C9E94_RS21655;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=C9E94_RS21655;old_locus_tag=C9E94_22205
NZ_PYJR01000135.1	Protein Homology	CDS	3811	4905	.	-	0	ID=cds-WP_000068738.1;Parent=gene-C9E94_RS21655;Dbxref=GenBank:WP_000068738.1;Name=WP_000068738.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461971.1;locus_tag=C9E94_RS21655;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_000068738.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	5360	6562	.	-	.	ID=gene-C9E94_RS21660;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=C9E94_RS21660;old_locus_tag=C9E94_22210
NZ_PYJR01000135.1	Protein Homology	CDS	5360	6562	.	-	0	ID=cds-WP_001192144.1;Parent=gene-C9E94_RS21660;Dbxref=GenBank:WP_001192144.1;Name=WP_001192144.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461972.1;locus_tag=C9E94_RS21660;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_001192144.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	6688	7866	.	-	.	ID=gene-C9E94_RS21665;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=C9E94_RS21665;old_locus_tag=C9E94_22215
NZ_PYJR01000135.1	Protein Homology	CDS	6688	7866	.	-	0	ID=cds-WP_000111142.1;Parent=gene-C9E94_RS21665;Dbxref=GenBank:WP_000111142.1;Name=WP_000111142.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461973.2;locus_tag=C9E94_RS21665;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_000111142.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	7863	9179	.	-	.	ID=gene-C9E94_RS21670;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=C9E94_RS21670;old_locus_tag=C9E94_22220
NZ_PYJR01000135.1	Protein Homology	CDS	7863	9179	.	-	0	ID=cds-WP_000193681.1;Parent=gene-C9E94_RS21670;Dbxref=GenBank:WP_000193681.1;Name=WP_000193681.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461974.1;locus_tag=C9E94_RS21670;product=Xaa-Pro aminopeptidase;protein_id=WP_000193681.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	9205	9783	.	-	.	ID=gene-C9E94_RS21675;Name=C9E94_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21675;old_locus_tag=C9E94_22225
NZ_PYJR01000135.1	Protein Homology	CDS	9205	9783	.	-	0	ID=cds-WP_000027236.1;Parent=gene-C9E94_RS21675;Dbxref=GenBank:WP_000027236.1;Name=WP_000027236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=C9E94_RS21675;product=YecA/YgfB family protein;protein_id=WP_000027236.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	9950	10279	.	+	.	ID=gene-C9E94_RS21680;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=C9E94_RS21680;old_locus_tag=C9E94_22235
NZ_PYJR01000135.1	Protein Homology	CDS	9950	10279	.	+	0	ID=cds-WP_001276011.1;Parent=gene-C9E94_RS21680;Dbxref=GenBank:WP_001276011.1;Name=WP_001276011.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461976.1;locus_tag=C9E94_RS21680;product=cell division protein ZapA;protein_id=WP_001276011.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	10321	10504	.	+	.	ID=gene-C9E94_RS21685;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=C9E94_RS21685;old_locus_tag=C9E94_22240
NZ_PYJR01000135.1	cmsearch	ncRNA	10321	10504	.	+	.	ID=rna-C9E94_RS21685;Parent=gene-C9E94_RS21685;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS21685;product=6S RNA
NZ_PYJR01000135.1	cmsearch	exon	10321	10504	.	+	.	ID=exon-C9E94_RS21685-1;Parent=rna-C9E94_RS21685;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS21685;product=6S RNA
NZ_PYJR01000135.1	RefSeq	gene	10525	11121	.	+	.	ID=gene-C9E94_RS21690;Name=C9E94_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21690;old_locus_tag=C9E94_22245
NZ_PYJR01000135.1	Protein Homology	CDS	10525	11121	.	+	0	ID=cds-WP_031604965.1;Parent=gene-C9E94_RS21690;Dbxref=GenBank:WP_031604965.1;Name=WP_031604965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=C9E94_RS21690;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_031604965.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	11503	12735	.	-	.	ID=gene-C9E94_RS21695;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=C9E94_RS21695;old_locus_tag=C9E94_22250
NZ_PYJR01000135.1	Protein Homology	CDS	11503	12735	.	-	0	ID=cds-WP_001151627.1;Parent=gene-C9E94_RS21695;Dbxref=GenBank:WP_001151627.1;Name=WP_001151627.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461978.1;locus_tag=C9E94_RS21695;product=phosphoglycerate dehydrogenase;protein_id=WP_001151627.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	13002	13661	.	-	.	ID=gene-C9E94_RS21700;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=C9E94_RS21700;old_locus_tag=C9E94_22255
NZ_PYJR01000135.1	Protein Homology	CDS	13002	13661	.	-	0	ID=cds-WP_000189741.1;Parent=gene-C9E94_RS21700;Dbxref=GenBank:WP_000189741.1;Name=WP_000189741.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461979.1;locus_tag=C9E94_RS21700;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_000189741.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	13815	14708	.	+	.	ID=gene-C9E94_RS21705;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=C9E94_RS21705;old_locus_tag=C9E94_22260
NZ_PYJR01000135.1	Protein Homology	CDS	13815	14708	.	+	0	ID=cds-WP_000828345.1;Parent=gene-C9E94_RS21705;Dbxref=GenBank:WP_000828345.1;Name=WP_000828345.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461980.1;locus_tag=C9E94_RS21705;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_000828345.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	14974	15720	.	-	.	ID=gene-C9E94_RS21715;Name=C9E94_RS21715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21715;old_locus_tag=C9E94_22270
NZ_PYJR01000135.1	Protein Homology	CDS	14974	15720	.	-	0	ID=cds-WP_000669854.1;Parent=gene-C9E94_RS21715;Dbxref=GenBank:WP_000669854.1;Name=WP_000669854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461981.1;locus_tag=C9E94_RS21715;product=oxidative stress defense protein;protein_id=WP_000669854.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	15814	16449	.	-	.	ID=gene-C9E94_RS21720;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=C9E94_RS21720;old_locus_tag=C9E94_22275
NZ_PYJR01000135.1	Protein Homology	CDS	15814	16449	.	-	0	ID=cds-WP_135401225.1;Parent=gene-C9E94_RS21720;Dbxref=GenBank:WP_135401225.1;Name=WP_135401225.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461982.1;locus_tag=C9E94_RS21720;product=arginine exporter ArgO;protein_id=WP_135401225.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	16650	17510	.	-	.	ID=gene-C9E94_RS21725;Name=C9E94_RS21725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21725;old_locus_tag=C9E94_22280
NZ_PYJR01000135.1	Protein Homology	CDS	16650	17510	.	-	0	ID=cds-WP_000389833.1;Parent=gene-C9E94_RS21725;Dbxref=GenBank:WP_000389833.1;Name=WP_000389833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461983.1;locus_tag=C9E94_RS21725;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000389833.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	17737	18816	.	-	.	ID=gene-C9E94_RS21730;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=C9E94_RS21730;old_locus_tag=C9E94_22285
NZ_PYJR01000135.1	Protein Homology	CDS	17737	18816	.	-	0	ID=cds-WP_000034386.1;Parent=gene-C9E94_RS21730;Dbxref=GenBank:WP_000034386.1;Name=WP_000034386.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=C9E94_RS21730;product=class II fructose-bisphosphate aldolase;protein_id=WP_000034386.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	18918	20081	.	-	.	ID=gene-C9E94_RS21735;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=C9E94_RS21735;old_locus_tag=C9E94_22290
NZ_PYJR01000135.1	Protein Homology	CDS	18918	20081	.	-	0	ID=cds-WP_000111274.1;Parent=gene-C9E94_RS21735;Dbxref=GenBank:WP_000111274.1;Name=WP_000111274.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=C9E94_RS21735;product=phosphoglycerate kinase;protein_id=WP_000111274.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	20103	21149	.	-	.	ID=gene-C9E94_RS21740;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=C9E94_RS21740;old_locus_tag=C9E94_22295
NZ_PYJR01000135.1	Protein Homology	CDS	20103	21149	.	-	0	ID=cds-WP_000218338.1;Parent=gene-C9E94_RS21740;Dbxref=GenBank:WP_000218338.1;Name=WP_000218338.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461986.1;locus_tag=C9E94_RS21740;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_000218338.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	21523	21948	.	+	.	ID=gene-C9E94_RS21750;Name=C9E94_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21750;old_locus_tag=C9E94_22305
NZ_PYJR01000135.1	Protein Homology	CDS	21523	21948	.	+	0	ID=cds-WP_000218562.1;Parent=gene-C9E94_RS21750;Dbxref=GenBank:WP_000218562.1;Name=WP_000218562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461987.1;locus_tag=C9E94_RS21750;product=PPC domain-containing DNA-binding protein;protein_id=WP_000218562.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	21974	22552	.	+	.	ID=gene-C9E94_RS21755;Name=C9E94_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21755;old_locus_tag=C9E94_22310
NZ_PYJR01000135.1	Protein Homology	CDS	21974	22552	.	+	0	ID=cds-WP_000124001.1;Parent=gene-C9E94_RS21755;Dbxref=GenBank:WP_000124001.1;Name=WP_000124001.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461988.1;locus_tag=C9E94_RS21755;product=ECF transporter S component;protein_id=WP_000124001.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	22553	23260	.	+	.	ID=gene-C9E94_RS21760;Name=C9E94_RS21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21760;old_locus_tag=C9E94_22315
NZ_PYJR01000135.1	Protein Homology	CDS	22553	23260	.	+	0	ID=cds-WP_094889075.1;Parent=gene-C9E94_RS21760;Dbxref=GenBank:WP_094889075.1;Name=WP_094889075.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461989.1;locus_tag=C9E94_RS21760;product=energy-coupling factor transporter transmembrane component T;protein_id=WP_094889075.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	23248	23925	.	+	.	ID=gene-C9E94_RS21765;Name=C9E94_RS21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21765;old_locus_tag=C9E94_22320
NZ_PYJR01000135.1	Protein Homology	CDS	23248	23925	.	+	0	ID=cds-WP_024151943.1;Parent=gene-C9E94_RS21765;Dbxref=GenBank:WP_024151943.1;Name=WP_024151943.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461990.1;locus_tag=C9E94_RS21765;product=ABC transporter ATP-binding protein;protein_id=WP_024151943.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	23919	24575	.	+	.	ID=gene-C9E94_RS21770;Name=C9E94_RS21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21770;old_locus_tag=C9E94_22325
NZ_PYJR01000135.1	Protein Homology	CDS	23919	24575	.	+	0	ID=cds-WP_094889074.1;Parent=gene-C9E94_RS21770;Dbxref=GenBank:WP_094889074.1;Name=WP_094889074.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461991.1;locus_tag=C9E94_RS21770;product=ABC transporter ATP-binding protein;protein_id=WP_094889074.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	24619	26610	.	-	.	ID=gene-C9E94_RS21775;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=C9E94_RS21775;old_locus_tag=C9E94_22330
NZ_PYJR01000135.1	Protein Homology	CDS	24619	26610	.	-	0	ID=cds-WP_023193721.1;Parent=gene-C9E94_RS21775;Dbxref=GenBank:WP_023193721.1;Name=WP_023193721.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461992.1;locus_tag=C9E94_RS21775;product=transketolase;protein_id=WP_023193721.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	26886	27644	.	+	.	ID=gene-C9E94_RS21780;Name=C9E94_RS21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21780;old_locus_tag=C9E94_22335
NZ_PYJR01000135.1	Protein Homology	CDS	26886	27644	.	+	0	ID=cds-WP_000701830.1;Parent=gene-C9E94_RS21780;Dbxref=GenBank:WP_000701830.1;Name=WP_000701830.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461993.1;locus_tag=C9E94_RS21780;product=M48 family metallopeptidase;protein_id=WP_000701830.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	27745	28665	.	-	.	ID=gene-C9E94_RS21785;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=C9E94_RS21785;old_locus_tag=C9E94_22340
NZ_PYJR01000135.1	Protein Homology	CDS	27745	28665	.	-	0	ID=cds-WP_000105550.1;Parent=gene-C9E94_RS21785;Dbxref=GenBank:WP_000105550.1;Name=WP_000105550.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461994.1;locus_tag=C9E94_RS21785;product=agmatinase;protein_id=WP_000105550.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	pseudogene	28870	29561	.	-	.	ID=gene-C9E94_RS21790;Name=C9E94_RS21790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS21790;old_locus_tag=C9E94_22345;pseudo=true
NZ_PYJR01000135.1	Protein Homology	CDS	28870	29561	.	-	0	ID=cds-C9E94_RS21790;Parent=gene-C9E94_RS21790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461995.3;locus_tag=C9E94_RS21790;product=alpha/beta fold hydrolase;pseudo=true;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	29775	30248	.	-	.	ID=gene-C9E94_RS21795;Name=C9E94_RS21795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21795;old_locus_tag=C9E94_22350
NZ_PYJR01000135.1	Protein Homology	CDS	29775	30248	.	-	0	ID=cds-WP_000965536.1;Parent=gene-C9E94_RS21795;Dbxref=GenBank:WP_000965536.1;Name=WP_000965536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461996.1;locus_tag=C9E94_RS21795;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000965536.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	30287	31294	.	-	.	ID=gene-C9E94_RS21800;Name=C9E94_RS21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21800;old_locus_tag=C9E94_22355
NZ_PYJR01000135.1	Protein Homology	CDS	30287	31294	.	-	0	ID=cds-WP_000104231.1;Parent=gene-C9E94_RS21800;Dbxref=GenBank:WP_000104231.1;Name=WP_000104231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461997.1;locus_tag=C9E94_RS21800;product=Ldh family oxidoreductase;protein_id=WP_000104231.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	31308	32324	.	-	.	ID=gene-C9E94_RS21805;Name=C9E94_RS21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21805;old_locus_tag=C9E94_22360
NZ_PYJR01000135.1	Protein Homology	CDS	31308	32324	.	-	0	ID=cds-WP_000853913.1;Parent=gene-C9E94_RS21805;Dbxref=GenBank:WP_000853913.1;Name=WP_000853913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461998.1;locus_tag=C9E94_RS21805;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_000853913.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	32327	33799	.	-	.	ID=gene-C9E94_RS21810;Name=C9E94_RS21810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21810;old_locus_tag=C9E94_22365
NZ_PYJR01000135.1	Protein Homology	CDS	32327	33799	.	-	0	ID=cds-WP_094889073.1;Parent=gene-C9E94_RS21810;Dbxref=GenBank:WP_094889073.1;Name=WP_094889073.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461999.1;locus_tag=C9E94_RS21810;product=mannitol dehydrogenase family protein;protein_id=WP_094889073.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	pseudogene	34448	34717	.	+	.	ID=gene-C9E94_RS23750;Name=C9E94_RS23750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23750;pseudo=true
NZ_PYJR01000135.1	Protein Homology	CDS	34448	34717	.	+	0	ID=cds-C9E94_RS23750;Parent=gene-C9E94_RS23750;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014766.6;locus_tag=C9E94_RS23750;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	35032	35832	.	-	.	ID=gene-C9E94_RS21820;Name=C9E94_RS21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21820;old_locus_tag=C9E94_22375
NZ_PYJR01000135.1	Protein Homology	CDS	35032	35832	.	-	0	ID=cds-WP_001576357.1;Parent=gene-C9E94_RS21820;Dbxref=GenBank:WP_001576357.1;Name=WP_001576357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462000.3;locus_tag=C9E94_RS21820;product=FadR/GntR family transcriptional regulator;protein_id=WP_001576357.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	35986	36717	.	-	.	ID=gene-C9E94_RS21825;Name=C9E94_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21825;old_locus_tag=C9E94_22380
NZ_PYJR01000135.1	Protein Homology	CDS	35986	36717	.	-	0	ID=cds-WP_000032789.1;Parent=gene-C9E94_RS21825;Dbxref=GenBank:WP_000032789.1;Name=WP_000032789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462001.1;locus_tag=C9E94_RS21825;product=hypothetical protein;protein_id=WP_000032789.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	36861	38837	.	-	.	ID=gene-C9E94_RS21830;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=C9E94_RS21830;old_locus_tag=C9E94_22385
NZ_PYJR01000135.1	Protein Homology	CDS	36861	38837	.	-	0	ID=cds-WP_001278580.1;Parent=gene-C9E94_RS21830;Dbxref=GenBank:WP_001278580.1;Name=WP_001278580.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462002.1;locus_tag=C9E94_RS21830;product=biosynthetic arginine decarboxylase;protein_id=WP_001278580.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	38846	38977	.	-	.	ID=gene-C9E94_RS21835;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=C9E94_RS21835;old_locus_tag=C9E94_22390
NZ_PYJR01000135.1	Protein Homology	CDS	38846	38977	.	-	0	ID=cds-WP_000729109.1;Parent=gene-C9E94_RS21835;Dbxref=GenBank:WP_000729109.1;Name=WP_000729109.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462003.1;locus_tag=C9E94_RS21835;product=acid stress response protein YqgB;protein_id=WP_000729109.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	39063	39212	.	-	.	ID=gene-C9E94_RS23755;Name=C9E94_RS23755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23755
NZ_PYJR01000135.1	Protein Homology	CDS	39063	39212	.	-	0	ID=cds-WP_001751809.1;Parent=gene-C9E94_RS23755;Dbxref=GenBank:WP_001751809.1;Name=WP_001751809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=C9E94_RS23755;product=hypothetical protein;protein_id=WP_001751809.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	39272	39571	.	-	.	ID=gene-C9E94_RS21845;Name=C9E94_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21845;old_locus_tag=C9E94_22400
NZ_PYJR01000135.1	GeneMarkS-2+	CDS	39272	39571	.	-	0	ID=cds-WP_015675611.1;Parent=gene-C9E94_RS21845;Dbxref=GenBank:WP_015675611.1;Name=WP_015675611.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS21845;product=hypothetical protein;protein_id=WP_015675611.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	39627	40781	.	+	.	ID=gene-C9E94_RS21850;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=C9E94_RS21850;old_locus_tag=C9E94_22405
NZ_PYJR01000135.1	Protein Homology	CDS	39627	40781	.	+	0	ID=cds-WP_001062140.1;Parent=gene-C9E94_RS21850;Dbxref=GenBank:WP_001062140.1;Name=WP_001062140.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=C9E94_RS21850;product=methionine adenosyltransferase;protein_id=WP_001062140.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	41274	42668	.	+	.	ID=gene-C9E94_RS21855;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=C9E94_RS21855;old_locus_tag=C9E94_22410
NZ_PYJR01000135.1	Protein Homology	CDS	41274	42668	.	+	0	ID=cds-WP_001113171.1;Parent=gene-C9E94_RS21855;Dbxref=GenBank:WP_001113171.1;Name=WP_001113171.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462007.1;locus_tag=C9E94_RS21855;product=galactose/proton symporter;protein_id=WP_001113171.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	42747	43244	.	+	.	ID=gene-C9E94_RS21860;Name=C9E94_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21860;old_locus_tag=C9E94_22415
NZ_PYJR01000135.1	Protein Homology	CDS	42747	43244	.	+	0	ID=cds-WP_000856775.1;Parent=gene-C9E94_RS21860;Dbxref=GenBank:WP_000856775.1;Name=WP_000856775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462008.1;locus_tag=C9E94_RS21860;product=SprT family zinc-dependent metalloprotease;protein_id=WP_000856775.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	43340	44047	.	+	.	ID=gene-C9E94_RS21865;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=C9E94_RS21865;old_locus_tag=C9E94_22420
NZ_PYJR01000135.1	Protein Homology	CDS	43340	44047	.	+	0	ID=cds-WP_000286122.1;Parent=gene-C9E94_RS21865;Dbxref=GenBank:WP_000286122.1;Name=WP_000286122.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462009.1;locus_tag=C9E94_RS21865;product=deoxyribonuclease I;protein_id=WP_000286122.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	44124	44855	.	+	.	ID=gene-C9E94_RS21870;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=C9E94_RS21870;old_locus_tag=C9E94_22425
NZ_PYJR01000135.1	Protein Homology	CDS	44124	44855	.	+	0	ID=cds-WP_001675718.1;Parent=gene-C9E94_RS21870;Dbxref=GenBank:WP_001675718.1;Name=WP_001675718.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=C9E94_RS21870;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_001675718.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	44875	45822	.	+	.	ID=gene-C9E94_RS21875;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=C9E94_RS21875;old_locus_tag=C9E94_22430
NZ_PYJR01000135.1	Protein Homology	CDS	44875	45822	.	+	0	ID=cds-WP_000593248.1;Parent=gene-C9E94_RS21875;Dbxref=GenBank:WP_000593248.1;Name=WP_000593248.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462011.1;locus_tag=C9E94_RS21875;product=glutathione synthase;protein_id=WP_000593248.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	46038	46601	.	+	.	ID=gene-C9E94_RS21880;Name=C9E94_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21880;old_locus_tag=C9E94_22435
NZ_PYJR01000135.1	Protein Homology	CDS	46038	46601	.	+	0	ID=cds-WP_001053173.1;Parent=gene-C9E94_RS21880;Dbxref=GenBank:WP_001053173.1;Name=WP_001053173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=C9E94_RS21880;product=YqgE/AlgH family protein;protein_id=WP_001053173.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	46601	47017	.	+	.	ID=gene-C9E94_RS21885;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=C9E94_RS21885;old_locus_tag=C9E94_22440
NZ_PYJR01000135.1	Protein Homology	CDS	46601	47017	.	+	0	ID=cds-WP_001285491.1;Parent=gene-C9E94_RS21885;Dbxref=GenBank:WP_001285491.1;Name=WP_001285491.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462013.1;locus_tag=C9E94_RS21885;product=Holliday junction resolvase RuvX;protein_id=WP_001285491.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	47064	47750	.	-	.	ID=gene-C9E94_RS21890;Name=C9E94_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21890;old_locus_tag=C9E94_22445
NZ_PYJR01000135.1	Protein Homology	CDS	47064	47750	.	-	0	ID=cds-WP_135401226.1;Parent=gene-C9E94_RS21890;Dbxref=GenBank:WP_135401226.1;Name=WP_135401226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462014.1;locus_tag=C9E94_RS21890;product=IclR family transcriptional regulator domain-containing protein;protein_id=WP_135401226.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	47883	48863	.	-	.	ID=gene-C9E94_RS21895;Name=C9E94_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21895;old_locus_tag=C9E94_22450
NZ_PYJR01000135.1	Protein Homology	CDS	47883	48863	.	-	0	ID=cds-WP_001055659.1;Parent=gene-C9E94_RS21895;Dbxref=GenBank:WP_001055659.1;Name=WP_001055659.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462015.1;locus_tag=C9E94_RS21895;product=type IV pilus twitching motility protein PilT;protein_id=WP_001055659.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	48881	49585	.	+	.	ID=gene-C9E94_RS21900;Name=C9E94_RS21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21900;old_locus_tag=C9E94_22455
NZ_PYJR01000135.1	Protein Homology	CDS	48881	49585	.	+	0	ID=cds-WP_000997812.1;Parent=gene-C9E94_RS21900;Dbxref=GenBank:WP_000997812.1;Name=WP_000997812.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462016.1;locus_tag=C9E94_RS21900;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_000997812.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	49604	50170	.	+	.	ID=gene-C9E94_RS21905;Name=C9E94_RS21905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21905;old_locus_tag=C9E94_22460
NZ_PYJR01000135.1	Protein Homology	CDS	49604	50170	.	+	0	ID=cds-WP_001094848.1;Parent=gene-C9E94_RS21905;Dbxref=GenBank:WP_001094848.1;Name=WP_001094848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462017.1;locus_tag=C9E94_RS21905;product=YggT family protein;protein_id=WP_001094848.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	50167	50457	.	+	.	ID=gene-C9E94_RS21910;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=C9E94_RS21910;old_locus_tag=C9E94_22465
NZ_PYJR01000135.1	Protein Homology	CDS	50167	50457	.	+	0	ID=cds-WP_001277205.1;Parent=gene-C9E94_RS21910;Dbxref=GenBank:WP_001277205.1;Name=WP_001277205.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462018.1;locus_tag=C9E94_RS21910;product=DUF167 family protein YggU;protein_id=WP_001277205.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	50465	51058	.	+	.	ID=gene-C9E94_RS21915;Name=C9E94_RS21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21915;old_locus_tag=C9E94_22470
NZ_PYJR01000135.1	Protein Homology	CDS	50465	51058	.	+	0	ID=cds-WP_001174769.1;Parent=gene-C9E94_RS21915;Dbxref=GenBank:WP_001174769.1;Name=WP_001174769.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462019.1;locus_tag=C9E94_RS21915;product=XTP/dITP diphosphatase;protein_id=WP_001174769.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	51051	52187	.	+	.	ID=gene-C9E94_RS21920;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=C9E94_RS21920;old_locus_tag=C9E94_22475
NZ_PYJR01000135.1	Protein Homology	CDS	51051	52187	.	+	0	ID=cds-WP_001096521.1;Parent=gene-C9E94_RS21920;Dbxref=GenBank:WP_001096521.1;Name=WP_001096521.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462020.1;locus_tag=C9E94_RS21920;product=radical SAM family heme chaperone HemW;protein_id=WP_001096521.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	52278	53285	.	-	.	ID=gene-C9E94_RS21925;Name=C9E94_RS21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21925;old_locus_tag=C9E94_22480
NZ_PYJR01000135.1	Protein Homology	CDS	52278	53285	.	-	0	ID=cds-WP_135401227.1;Parent=gene-C9E94_RS21925;Dbxref=GenBank:WP_135401227.1;Name=WP_135401227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462021.1;locus_tag=C9E94_RS21925;product=DUF1202 family protein;protein_id=WP_135401227.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	53418	54464	.	-	.	ID=gene-C9E94_RS21930;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=C9E94_RS21930;old_locus_tag=C9E94_22485
NZ_PYJR01000135.1	Protein Homology	CDS	53418	54464	.	-	0	ID=cds-WP_000394188.1;Parent=gene-C9E94_RS21930;Dbxref=GenBank:WP_000394188.1;Name=WP_000394188.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462022.1;locus_tag=C9E94_RS21930;product=L-asparaginase 2;protein_id=WP_000394188.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	54653	55372	.	-	.	ID=gene-C9E94_RS21935;Name=C9E94_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21935;old_locus_tag=C9E94_22490
NZ_PYJR01000135.1	Protein Homology	CDS	54653	55372	.	-	0	ID=cds-WP_000984838.1;Parent=gene-C9E94_RS21935;Dbxref=GenBank:WP_000984838.1;Name=WP_000984838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462023.1;locus_tag=C9E94_RS21935;product=DUF2884 domain-containing protein;protein_id=WP_000984838.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	55422	55748	.	-	.	ID=gene-C9E94_RS21940;Name=C9E94_RS21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21940;old_locus_tag=C9E94_22495
NZ_PYJR01000135.1	Protein Homology	CDS	55422	55748	.	-	0	ID=cds-WP_001107574.1;Parent=gene-C9E94_RS21940;Dbxref=GenBank:WP_001107574.1;Name=WP_001107574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462024.1;locus_tag=C9E94_RS21940;product=YggL family protein;protein_id=WP_001107574.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	55748	56467	.	-	.	ID=gene-C9E94_RS21945;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=C9E94_RS21945;old_locus_tag=C9E94_22500
NZ_PYJR01000135.1	Protein Homology	CDS	55748	56467	.	-	0	ID=cds-WP_000786894.1;Parent=gene-C9E94_RS21945;Dbxref=GenBank:WP_000786894.1;Name=WP_000786894.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462025.1;locus_tag=C9E94_RS21945;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_000786894.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	56622	57674	.	+	.	ID=gene-C9E94_RS21950;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=C9E94_RS21950;old_locus_tag=C9E94_22510
NZ_PYJR01000135.1	Protein Homology	CDS	56622	57674	.	+	0	ID=cds-WP_001148948.1;Parent=gene-C9E94_RS21950;Dbxref=GenBank:WP_001148948.1;Name=WP_001148948.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462026.1;locus_tag=C9E94_RS21950;product=A/G-specific adenine glycosylase;protein_id=WP_001148948.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	57702	57977	.	+	.	ID=gene-C9E94_RS21955;Name=C9E94_RS21955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21955;old_locus_tag=C9E94_22515
NZ_PYJR01000135.1	Protein Homology	CDS	57702	57977	.	+	0	ID=cds-WP_000091706.1;Parent=gene-C9E94_RS21955;Dbxref=GenBank:WP_000091706.1;Name=WP_000091706.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462027.1;locus_tag=C9E94_RS21955;product=oxidative damage protection protein;protein_id=WP_000091706.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	58090	59175	.	+	.	ID=gene-C9E94_RS21960;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=C9E94_RS21960;old_locus_tag=C9E94_22520
NZ_PYJR01000135.1	Protein Homology	CDS	58090	59175	.	+	0	ID=cds-WP_000976289.1;Parent=gene-C9E94_RS21960;Dbxref=GenBank:WP_000976289.1;Name=WP_000976289.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462028.1;locus_tag=C9E94_RS21960;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_000976289.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	59392	60648	.	+	.	ID=gene-C9E94_RS21965;Name=C9E94_RS21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21965;old_locus_tag=C9E94_22525
NZ_PYJR01000135.1	Protein Homology	CDS	59392	60648	.	+	0	ID=cds-WP_001049804.1;Parent=gene-C9E94_RS21965;Dbxref=GenBank:WP_001049804.1;Name=WP_001049804.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462029.1;locus_tag=C9E94_RS21965;product=nucleoside permease;protein_id=WP_001049804.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	60710	62845	.	-	.	ID=gene-C9E94_RS21970;Name=C9E94_RS21970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21970;old_locus_tag=C9E94_22530
NZ_PYJR01000135.1	Protein Homology	CDS	60710	62845	.	-	0	ID=cds-WP_080219025.1;Parent=gene-C9E94_RS21970;Dbxref=GenBank:WP_080219025.1;Name=WP_080219025.1;Ontology_term=GO:0006596,GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;go_process=polyamine biosynthetic process|0006596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462030.1;locus_tag=C9E94_RS21970;product=ornithine decarboxylase;protein_id=WP_080219025.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	63270	63977	.	+	.	ID=gene-C9E94_RS21975;Name=C9E94_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21975;old_locus_tag=C9E94_22540
NZ_PYJR01000135.1	Protein Homology	CDS	63270	63977	.	+	0	ID=cds-WP_135401228.1;Parent=gene-C9E94_RS21975;Dbxref=GenBank:WP_135401228.1;Name=WP_135401228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462031.1;locus_tag=C9E94_RS21975;product=DUF554 domain-containing protein;protein_id=WP_135401228.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	64083	64158	.	+	.	ID=gene-C9E94_RS21980;Name=C9E94_RS21980;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS21980;old_locus_tag=C9E94_22545
NZ_PYJR01000135.1	tRNAscan-SE	tRNA	64083	64158	.	+	.	ID=rna-C9E94_RS21980;Parent=gene-C9E94_RS21980;anticodon=(pos:64116..64118);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS21980;product=tRNA-Phe
NZ_PYJR01000135.1	tRNAscan-SE	exon	64083	64158	.	+	.	ID=exon-C9E94_RS21980-1;Parent=rna-C9E94_RS21980;anticodon=(pos:64116..64118);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS21980;product=tRNA-Phe
NZ_PYJR01000135.1	RefSeq	pseudogene	64318	64546	.	+	.	ID=gene-C9E94_RS21985;Name=C9E94_RS21985;end_range=64546,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS21985;old_locus_tag=C9E94_22550;partial=true;pseudo=true
NZ_PYJR01000135.1	Protein Homology	CDS	64318	64546	.	+	0	ID=cds-C9E94_RS21985;Parent=gene-C9E94_RS21985;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;end_range=64546,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005975783.1;locus_tag=C9E94_RS21985;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	64811	65725	.	-	.	ID=gene-C9E94_RS21990;Name=C9E94_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21990;old_locus_tag=C9E94_22555
NZ_PYJR01000135.1	Protein Homology	CDS	64811	65725	.	-	0	ID=cds-WP_080169895.1;Parent=gene-C9E94_RS21990;Dbxref=GenBank:WP_080169895.1;Name=WP_080169895.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441073.1;locus_tag=C9E94_RS21990;product=LysR family transcriptional regulator;protein_id=WP_080169895.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	65826	66449	.	+	.	ID=gene-C9E94_RS21995;Name=C9E94_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS21995;old_locus_tag=C9E94_22560
NZ_PYJR01000135.1	Protein Homology	CDS	65826	66449	.	+	0	ID=cds-WP_023254044.1;Parent=gene-C9E94_RS21995;Dbxref=GenBank:WP_023254044.1;Name=WP_023254044.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0016491,GO:0050136,GO:0050446;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,azobenzene reductase (NADP+) activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000697438.1;locus_tag=C9E94_RS21995;product=FMN-dependent NADH-azoreductase;protein_id=WP_023254044.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	66475	66738	.	+	.	ID=gene-C9E94_RS22000;Name=C9E94_RS22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22000;old_locus_tag=C9E94_22565
NZ_PYJR01000135.1	Protein Homology	CDS	66475	66738	.	+	0	ID=cds-WP_001027081.1;Parent=gene-C9E94_RS22000;Dbxref=GenBank:WP_001027081.1;Name=WP_001027081.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018986.6;locus_tag=C9E94_RS22000;product=YdgH/BhsA/McbA-like domain containing protein;protein_id=WP_001027081.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	66814	68133	.	+	.	ID=gene-C9E94_RS22005;Name=C9E94_RS22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22005;old_locus_tag=C9E94_22570
NZ_PYJR01000135.1	Protein Homology	CDS	66814	68133	.	+	0	ID=cds-WP_135401229.1;Parent=gene-C9E94_RS22005;Dbxref=GenBank:WP_135401229.1;Name=WP_135401229.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534139.1;locus_tag=C9E94_RS22005;product=ferredoxin reductase family protein;protein_id=WP_135401229.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	68405	68716	.	-	.	ID=gene-C9E94_RS22010;Name=C9E94_RS22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22010;old_locus_tag=C9E94_22575
NZ_PYJR01000135.1	Protein Homology	CDS	68405	68716	.	-	0	ID=cds-WP_249264392.1;Parent=gene-C9E94_RS22010;Dbxref=GenBank:WP_249264392.1;Name=WP_249264392.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019154.6;locus_tag=C9E94_RS22010;product=conjugal transfer nickase/helicase domain-containing protein;protein_id=WP_249264392.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	68706	69071	.	-	.	ID=gene-C9E94_RS22015;Name=C9E94_RS22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22015
NZ_PYJR01000135.1	GeneMarkS-2+	CDS	68706	69071	.	-	0	ID=cds-WP_126523837.1;Parent=gene-C9E94_RS22015;Dbxref=GenBank:WP_126523837.1;Name=WP_126523837.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS22015;product=hypothetical protein;protein_id=WP_126523837.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	69115	69666	.	+	.	ID=gene-C9E94_RS22020;Name=C9E94_RS22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22020;old_locus_tag=C9E94_22585
NZ_PYJR01000135.1	Protein Homology	CDS	69115	69666	.	+	0	ID=cds-WP_254893973.1;Parent=gene-C9E94_RS22020;Dbxref=GenBank:WP_254893973.1;Name=WP_254893973.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: protein motif:HMM:NF014442.6;locus_tag=C9E94_RS22020;product=N-6 DNA methylase;protein_id=WP_254893973.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	69786	70928	.	-	.	ID=gene-C9E94_RS22025;Name=C9E94_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22025;old_locus_tag=C9E94_22590
NZ_PYJR01000135.1	Protein Homology	CDS	69786	70928	.	-	0	ID=cds-WP_079946666.1;Parent=gene-C9E94_RS22025;Dbxref=GenBank:WP_079946666.1;Name=WP_079946666.1;Ontology_term=GO:0000287,GO:0005524,GO:0042803;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012822466.1;locus_tag=C9E94_RS22025;product=Fic family protein;protein_id=WP_079946666.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	71541	71921	.	-	.	ID=gene-C9E94_RS22035;Name=C9E94_RS22035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22035;old_locus_tag=C9E94_22600
NZ_PYJR01000135.1	Protein Homology	CDS	71541	71921	.	-	0	ID=cds-WP_000582672.1;Parent=gene-C9E94_RS22035;Dbxref=GenBank:WP_000582672.1;Name=WP_000582672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582669.1;locus_tag=C9E94_RS22035;product=VOC family protein;protein_id=WP_000582672.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	71986	73311	.	-	.	ID=gene-C9E94_RS22040;Name=ripA;gbkey=Gene;gene=ripA;gene_biotype=protein_coding;gene_synonym=ict;locus_tag=C9E94_RS22040;old_locus_tag=C9E94_22605
NZ_PYJR01000135.1	Protein Homology	CDS	71986	73311	.	-	0	ID=cds-WP_135401230.1;Parent=gene-C9E94_RS22040;Dbxref=GenBank:WP_135401230.1;Name=WP_135401230.1;Note=Transfers CoA from succinate to itaconate;gbkey=CDS;gene=ripA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462033.1;locus_tag=C9E94_RS22040;product=itaconate CoA-transferase RipA/Ict;protein_id=WP_135401230.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	73336	73863	.	-	.	ID=gene-C9E94_RS22045;Name=ripB;gbkey=Gene;gene=ripB;gene_biotype=protein_coding;locus_tag=C9E94_RS22045;old_locus_tag=C9E94_22610
NZ_PYJR01000135.1	Protein Homology	CDS	73336	73863	.	-	0	ID=cds-WP_001094307.1;Parent=gene-C9E94_RS22045;Dbxref=GenBank:WP_001094307.1;Name=WP_001094307.1;Note=Second step in itaconate degradation.;gbkey=CDS;gene=ripB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462034.1;locus_tag=C9E94_RS22045;product=(R)-specific enoyl-CoA hydratase RipB/Ich;protein_id=WP_001094307.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	73887	74729	.	-	.	ID=gene-C9E94_RS22050;Name=ripC;gbkey=Gene;gene=ripC;gene_biotype=protein_coding;locus_tag=C9E94_RS22050;old_locus_tag=C9E94_22615
NZ_PYJR01000135.1	Protein Homology	CDS	73887	74729	.	-	0	ID=cds-WP_001112897.1;Parent=gene-C9E94_RS22050;Dbxref=GenBank:WP_001112897.1;Name=WP_001112897.1;Note=Third step in itaconate degradation.;gbkey=CDS;gene=ripC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462035.1;locus_tag=C9E94_RS22050;product=itaconate degradation C-C-lyase RipC;protein_id=WP_001112897.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	74821	75699	.	+	.	ID=gene-C9E94_RS22055;Name=ripR;gbkey=Gene;gene=ripR;gene_biotype=protein_coding;locus_tag=C9E94_RS22055;old_locus_tag=C9E94_22620
NZ_PYJR01000135.1	Protein Homology	CDS	74821	75699	.	+	0	ID=cds-WP_000423170.1;Parent=gene-C9E94_RS22055;Dbxref=GenBank:WP_000423170.1;Name=WP_000423170.1;gbkey=CDS;gene=ripR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462036.1;locus_tag=C9E94_RS22055;product=itaconate degradation transcriptional regulator RipR;protein_id=WP_000423170.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	75747	77486	.	-	.	ID=gene-C9E94_RS22060;Name=C9E94_RS22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22060;old_locus_tag=C9E94_22625
NZ_PYJR01000135.1	Protein Homology	CDS	75747	77486	.	-	0	ID=cds-WP_000712459.1;Parent=gene-C9E94_RS22060;Dbxref=GenBank:WP_000712459.1;Name=WP_000712459.1;Ontology_term=GO:0004065,GO:0008081,GO:0046872;gbkey=CDS;go_function=arylsulfatase activity|0004065||IEA,phosphoric diester hydrolase activity|0008081||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462037.1;locus_tag=C9E94_RS22060;product=arylsulfatase;protein_id=WP_000712459.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	77555	78739	.	-	.	ID=gene-C9E94_RS22065;Name=C9E94_RS22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22065;old_locus_tag=C9E94_22630
NZ_PYJR01000135.1	Protein Homology	CDS	77555	78739	.	-	0	ID=cds-WP_023203802.1;Parent=gene-C9E94_RS22065;Dbxref=GenBank:WP_023203802.1;Name=WP_023203802.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462038.1;locus_tag=C9E94_RS22065;product=anaerobic sulfatase maturase;protein_id=WP_023203802.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	79251	79934	.	+	.	ID=gene-C9E94_RS22070;Name=C9E94_RS22070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22070;old_locus_tag=C9E94_22635
NZ_PYJR01000135.1	Protein Homology	CDS	79251	79934	.	+	0	ID=cds-WP_001275363.1;Parent=gene-C9E94_RS22070;Dbxref=GenBank:WP_001275363.1;Name=WP_001275363.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462039.1;locus_tag=C9E94_RS22070;product=helix-turn-helix transcriptional regulator;protein_id=WP_001275363.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	80038	80595	.	-	.	ID=gene-C9E94_RS22075;Name=C9E94_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22075;old_locus_tag=C9E94_22640
NZ_PYJR01000135.1	Protein Homology	CDS	80038	80595	.	-	0	ID=cds-WP_000100106.1;Parent=gene-C9E94_RS22075;Dbxref=GenBank:WP_000100106.1;Name=WP_000100106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462040.1;locus_tag=C9E94_RS22075;product=DUF3156 family protein;protein_id=WP_000100106.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	80573	82072	.	-	.	ID=gene-C9E94_RS22080;Name=C9E94_RS22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22080;old_locus_tag=C9E94_22645
NZ_PYJR01000135.1	Protein Homology	CDS	80573	82072	.	-	0	ID=cds-WP_000475960.1;Parent=gene-C9E94_RS22080;Dbxref=GenBank:WP_000475960.1;Name=WP_000475960.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462041.1;locus_tag=C9E94_RS22080;product=APC family permease;protein_id=WP_000475960.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	82281	82655	.	-	.	ID=gene-C9E94_RS22085;Name=C9E94_RS22085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22085;old_locus_tag=C9E94_22650
NZ_PYJR01000135.1	Protein Homology	CDS	82281	82655	.	-	0	ID=cds-WP_000542979.1;Parent=gene-C9E94_RS22085;Dbxref=GenBank:WP_000542979.1;Name=WP_000542979.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462042.1;locus_tag=C9E94_RS22085;product=cupin domain-containing protein;protein_id=WP_000542979.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	82670	83971	.	-	.	ID=gene-C9E94_RS22090;Name=C9E94_RS22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22090;old_locus_tag=C9E94_22655
NZ_PYJR01000135.1	Protein Homology	CDS	82670	83971	.	-	0	ID=cds-WP_001092814.1;Parent=gene-C9E94_RS22090;Dbxref=GenBank:WP_001092814.1;Name=WP_001092814.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462043.1;locus_tag=C9E94_RS22090;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_001092814.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	84133	85617	.	+	.	ID=gene-C9E94_RS22095;Name=C9E94_RS22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22095;old_locus_tag=C9E94_22660
NZ_PYJR01000135.1	Protein Homology	CDS	84133	85617	.	+	0	ID=cds-WP_135401231.1;Parent=gene-C9E94_RS22095;Dbxref=GenBank:WP_135401231.1;Name=WP_135401231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462044.1;locus_tag=C9E94_RS22095;product=NAD-dependent phenylacetaldehyde dehydrogenase;protein_id=WP_135401231.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	85753	86133	.	-	.	ID=gene-C9E94_RS22100;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=C9E94_RS22100;old_locus_tag=C9E94_22665
NZ_PYJR01000135.1	Protein Homology	CDS	85753	86133	.	-	0	ID=cds-WP_023205443.1;Parent=gene-C9E94_RS22100;Dbxref=GenBank:WP_023205443.1;Name=WP_023205443.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462045.1;locus_tag=C9E94_RS22100;product=anti-adapter protein IraD;protein_id=WP_023205443.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	86133	86618	.	-	.	ID=gene-C9E94_RS22105;Name=C9E94_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22105;old_locus_tag=C9E94_22670
NZ_PYJR01000135.1	Protein Homology	CDS	86133	86618	.	-	0	ID=cds-WP_135401232.1;Parent=gene-C9E94_RS22105;Dbxref=GenBank:WP_135401232.1;Name=WP_135401232.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462046.1;locus_tag=C9E94_RS22105;product=Hcp family type VI secretion system effector;protein_id=WP_135401232.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	87344	88267	.	-	.	ID=gene-C9E94_RS22110;Name=C9E94_RS22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22110;old_locus_tag=C9E94_22675
NZ_PYJR01000135.1	Protein Homology	CDS	87344	88267	.	-	0	ID=cds-WP_000540892.1;Parent=gene-C9E94_RS22110;Dbxref=GenBank:WP_000540892.1;Name=WP_000540892.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462047.1;locus_tag=C9E94_RS22110;product=polysaccharide deacetylase family protein;protein_id=WP_000540892.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	88306	89184	.	-	.	ID=gene-C9E94_RS22115;Name=C9E94_RS22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22115;old_locus_tag=C9E94_22680
NZ_PYJR01000135.1	Protein Homology	CDS	88306	89184	.	-	0	ID=cds-WP_000089255.1;Parent=gene-C9E94_RS22115;Dbxref=GenBank:WP_000089255.1;Name=WP_000089255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462048.1;locus_tag=C9E94_RS22115;product=carbon-nitrogen hydrolase family protein;protein_id=WP_000089255.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	89580	90884	.	-	.	ID=gene-C9E94_RS22120;Name=C9E94_RS22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22120;old_locus_tag=C9E94_22685
NZ_PYJR01000135.1	Protein Homology	CDS	89580	90884	.	-	0	ID=cds-WP_000784371.1;Parent=gene-C9E94_RS22120;Dbxref=GenBank:WP_000784371.1;Name=WP_000784371.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462049.1;locus_tag=C9E94_RS22120;product=MFS transporter;protein_id=WP_000784371.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	91289	92473	.	+	.	ID=gene-C9E94_RS22125;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=C9E94_RS22125;old_locus_tag=C9E94_22690
NZ_PYJR01000135.1	Protein Homology	CDS	91289	92473	.	+	0	ID=cds-WP_000815487.1;Parent=gene-C9E94_RS22125;Dbxref=GenBank:WP_000815487.1;Name=WP_000815487.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462050.1;locus_tag=C9E94_RS22125;product=mannonate dehydratase;protein_id=WP_000815487.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	92584	94056	.	+	.	ID=gene-C9E94_RS22130;Name=C9E94_RS22130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22130;old_locus_tag=C9E94_22695
NZ_PYJR01000135.1	Protein Homology	CDS	92584	94056	.	+	0	ID=cds-WP_001620029.1;Parent=gene-C9E94_RS22130;Dbxref=GenBank:WP_001620029.1;Name=WP_001620029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462051.1;locus_tag=C9E94_RS22130;product=fructuronate reductase;protein_id=WP_001620029.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	94068	95480	.	+	.	ID=gene-C9E94_RS22135;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=C9E94_RS22135;old_locus_tag=C9E94_22700
NZ_PYJR01000135.1	Protein Homology	CDS	94068	95480	.	+	0	ID=cds-WP_135401233.1;Parent=gene-C9E94_RS22135;Dbxref=GenBank:WP_135401233.1;Name=WP_135401233.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462052.1;locus_tag=C9E94_RS22135;product=glucuronate isomerase;protein_id=WP_135401233.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	95780	96838	.	-	.	ID=gene-C9E94_RS22140;Name=C9E94_RS22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22140;old_locus_tag=C9E94_22705
NZ_PYJR01000135.1	Protein Homology	CDS	95780	96838	.	-	0	ID=cds-WP_000475245.1;Parent=gene-C9E94_RS22140;Dbxref=GenBank:WP_000475245.1;Name=WP_000475245.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA,zinc ion binding|0008270||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462053.1;locus_tag=C9E94_RS22140;product=methyl-accepting chemotaxis protein;protein_id=WP_000475245.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	97508	99364	.	-	.	ID=gene-C9E94_RS22145;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=C9E94_RS22145;old_locus_tag=C9E94_22710
NZ_PYJR01000135.1	Protein Homology	CDS	97508	99364	.	-	0	ID=cds-WP_000033690.1;Parent=gene-C9E94_RS22145;Dbxref=GenBank:WP_000033690.1;Name=WP_000033690.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462054.1;locus_tag=C9E94_RS22145;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_000033690.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	99591	100457	.	+	.	ID=gene-C9E94_RS22150;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=C9E94_RS22150;old_locus_tag=C9E94_22715
NZ_PYJR01000135.1	Protein Homology	CDS	99591	100457	.	+	0	ID=cds-WP_000774852.1;Parent=gene-C9E94_RS22150;Dbxref=GenBank:WP_000774852.1;Name=WP_000774852.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462055.1;locus_tag=C9E94_RS22150;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_000774852.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	100525	101235	.	-	.	ID=gene-C9E94_RS22155;Name=C9E94_RS22155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22155;old_locus_tag=C9E94_22720
NZ_PYJR01000135.1	Protein Homology	CDS	100525	101235	.	-	0	ID=cds-WP_001582361.1;Parent=gene-C9E94_RS22155;Dbxref=GenBank:WP_001582361.1;Name=WP_001582361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462056.1;locus_tag=C9E94_RS22155;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_001582361.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	101235	102287	.	-	.	ID=gene-C9E94_RS22160;Name=C9E94_RS22160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22160;old_locus_tag=C9E94_22725
NZ_PYJR01000135.1	Protein Homology	CDS	101235	102287	.	-	0	ID=cds-WP_001032007.1;Parent=gene-C9E94_RS22160;Dbxref=GenBank:WP_001032007.1;Name=WP_001032007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462057.1;locus_tag=C9E94_RS22160;product=ABC transporter substrate-binding protein;protein_id=WP_001032007.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	102363	102611	.	-	.	ID=gene-C9E94_RS22165;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=C9E94_RS22165;old_locus_tag=C9E94_22730
NZ_PYJR01000135.1	Protein Homology	CDS	102363	102611	.	-	0	ID=cds-WP_000334887.1;Parent=gene-C9E94_RS22165;Dbxref=GenBank:WP_000334887.1;Name=WP_000334887.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462058.1;locus_tag=C9E94_RS22165;product=hydrogenase maturation factor HybG;protein_id=WP_000334887.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	102639	102980	.	-	.	ID=gene-C9E94_RS22170;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=C9E94_RS22170;old_locus_tag=C9E94_22735
NZ_PYJR01000135.1	Protein Homology	CDS	102639	102980	.	-	0	ID=cds-WP_000544945.1;Parent=gene-C9E94_RS22170;Dbxref=GenBank:WP_000544945.1;Name=WP_000544945.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462059.1;locus_tag=C9E94_RS22170;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544945.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	102973	103461	.	-	.	ID=gene-C9E94_RS22175;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=C9E94_RS22175;old_locus_tag=C9E94_22740
NZ_PYJR01000135.1	Protein Homology	CDS	102973	103461	.	-	0	ID=cds-WP_000004956.1;Parent=gene-C9E94_RS22175;Dbxref=GenBank:WP_000004956.1;Name=WP_000004956.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462060.1;locus_tag=C9E94_RS22175;product=hydrogenase-2 assembly chaperone;protein_id=WP_000004956.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	103454	103948	.	-	.	ID=gene-C9E94_RS22180;Name=C9E94_RS22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22180;old_locus_tag=C9E94_22745
NZ_PYJR01000135.1	Protein Homology	CDS	103454	103948	.	-	0	ID=cds-WP_001221960.1;Parent=gene-C9E94_RS22180;Dbxref=GenBank:WP_001221960.1;Name=WP_001221960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462061.1;locus_tag=C9E94_RS22180;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_001221960.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	103948	105651	.	-	.	ID=gene-C9E94_RS22185;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=C9E94_RS22185;old_locus_tag=C9E94_22750
NZ_PYJR01000135.1	Protein Homology	CDS	103948	105651	.	-	0	ID=cds-WP_000083044.1;Parent=gene-C9E94_RS22185;Dbxref=GenBank:WP_000083044.1;Name=WP_000083044.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462062.1;locus_tag=C9E94_RS22185;product=hydrogenase 2 large subunit;protein_id=WP_000083044.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	105648	106826	.	-	.	ID=gene-C9E94_RS22190;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=C9E94_RS22190;old_locus_tag=C9E94_22755
NZ_PYJR01000135.1	Protein Homology	CDS	105648	106826	.	-	0	ID=cds-WP_000017678.1;Parent=gene-C9E94_RS22190;Dbxref=GenBank:WP_000017678.1;Name=WP_000017678.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462063.1;locus_tag=C9E94_RS22190;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_000017678.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	106816	107802	.	-	.	ID=gene-C9E94_RS22195;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=C9E94_RS22195;old_locus_tag=C9E94_22760
NZ_PYJR01000135.1	Protein Homology	CDS	106816	107802	.	-	0	ID=cds-WP_001081721.1;Parent=gene-C9E94_RS22195;Dbxref=GenBank:WP_001081721.1;Name=WP_001081721.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462064.1;locus_tag=C9E94_RS22195;product=hydrogenase 2 operon protein HybA;protein_id=WP_001081721.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	107805	108923	.	-	.	ID=gene-C9E94_RS22200;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=C9E94_RS22200;old_locus_tag=C9E94_22765
NZ_PYJR01000135.1	Protein Homology	CDS	107805	108923	.	-	0	ID=cds-WP_000145429.1;Parent=gene-C9E94_RS22200;Dbxref=GenBank:WP_000145429.1;Name=WP_000145429.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462065.1;locus_tag=C9E94_RS22200;product=hydrogenase 2 small subunit;protein_id=WP_000145429.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	109113	109400	.	-	.	ID=gene-C9E94_RS22205;Name=C9E94_RS22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22205;old_locus_tag=C9E94_22775
NZ_PYJR01000135.1	Protein Homology	CDS	109113	109400	.	-	0	ID=cds-WP_001059119.1;Parent=gene-C9E94_RS22205;Dbxref=GenBank:WP_001059119.1;Name=WP_001059119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462066.1;locus_tag=C9E94_RS22205;product=DUF2623 family protein;protein_id=WP_001059119.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	109485	111128	.	-	.	ID=gene-C9E94_RS22210;Name=C9E94_RS22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22210;old_locus_tag=C9E94_22780
NZ_PYJR01000135.1	Protein Homology	CDS	109485	111128	.	-	0	ID=cds-WP_001238432.1;Parent=gene-C9E94_RS22210;Dbxref=GenBank:WP_001238432.1;Name=WP_001238432.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=C9E94_RS22210;product=methyl-accepting chemotaxis protein;protein_id=WP_001238432.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	111435	111929	.	-	.	ID=gene-C9E94_RS22215;Name=C9E94_RS22215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22215;old_locus_tag=C9E94_22785
NZ_PYJR01000135.1	Protein Homology	CDS	111435	111929	.	-	0	ID=cds-WP_000439335.1;Parent=gene-C9E94_RS22215;Dbxref=GenBank:WP_000439335.1;Name=WP_000439335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462068.1;locus_tag=C9E94_RS22215;product=TIGR00645 family protein;protein_id=WP_000439335.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	112208	112711	.	-	.	ID=gene-C9E94_RS22220;Name=C9E94_RS22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22220;old_locus_tag=C9E94_22790
NZ_PYJR01000135.1	Protein Homology	CDS	112208	112711	.	-	0	ID=cds-WP_001534190.1;Parent=gene-C9E94_RS22220;Dbxref=GenBank:WP_001534190.1;Name=WP_001534190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441059.1;locus_tag=C9E94_RS22220;product=ESA_00282 family adhesion-associated protein;protein_id=WP_001534190.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	112815	113225	.	+	.	ID=gene-C9E94_RS22225;Name=C9E94_RS22225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22225;old_locus_tag=C9E94_22795
NZ_PYJR01000135.1	Protein Homology	CDS	112815	113225	.	+	0	ID=cds-WP_023201103.1;Parent=gene-C9E94_RS22225;Dbxref=GenBank:WP_023201103.1;Name=WP_023201103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462070.1;locus_tag=C9E94_RS22225;product=hypothetical protein;protein_id=WP_023201103.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	113212	113616	.	+	.	ID=gene-C9E94_RS22230;Name=C9E94_RS22230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22230;old_locus_tag=C9E94_22800
NZ_PYJR01000135.1	Protein Homology	CDS	113212	113616	.	+	0	ID=cds-WP_000665657.1;Parent=gene-C9E94_RS22230;Dbxref=GenBank:WP_000665657.1;Name=WP_000665657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462071.1;locus_tag=C9E94_RS22230;product=hypothetical protein;protein_id=WP_000665657.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	113740	114624	.	+	.	ID=gene-C9E94_RS22235;Name=C9E94_RS22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22235;old_locus_tag=C9E94_22805
NZ_PYJR01000135.1	Protein Homology	CDS	113740	114624	.	+	0	ID=cds-WP_000019032.1;Parent=gene-C9E94_RS22235;Dbxref=GenBank:WP_000019032.1;Name=WP_000019032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462072.1;locus_tag=C9E94_RS22235;product=SDR family oxidoreductase;protein_id=WP_000019032.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	114737	115162	.	-	.	ID=gene-C9E94_RS22240;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=C9E94_RS22240;old_locus_tag=C9E94_22810
NZ_PYJR01000135.1	Protein Homology	CDS	114737	115162	.	-	0	ID=cds-WP_001251476.1;Parent=gene-C9E94_RS22240;Dbxref=GenBank:WP_001251476.1;Name=WP_001251476.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462073.1;locus_tag=C9E94_RS22240;product=TonB system transport protein ExbD;protein_id=WP_001251476.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	115169	115903	.	-	.	ID=gene-C9E94_RS22245;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=C9E94_RS22245;old_locus_tag=C9E94_22815
NZ_PYJR01000135.1	Protein Homology	CDS	115169	115903	.	-	0	ID=cds-WP_000527862.1;Parent=gene-C9E94_RS22245;Dbxref=GenBank:WP_000527862.1;Name=WP_000527862.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462074.1;locus_tag=C9E94_RS22245;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_000527862.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	116155	117342	.	+	.	ID=gene-C9E94_RS22250;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=C9E94_RS22250;old_locus_tag=C9E94_22825
NZ_PYJR01000135.1	Protein Homology	CDS	116155	117342	.	+	0	ID=cds-WP_000130270.1;Parent=gene-C9E94_RS22250;Dbxref=GenBank:WP_000130270.1;Name=WP_000130270.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462076.1;locus_tag=C9E94_RS22250;product=cystathionine beta-lyase;protein_id=WP_000130270.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	117482	118141	.	+	.	ID=gene-C9E94_RS22255;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=C9E94_RS22255;old_locus_tag=C9E94_22830
NZ_PYJR01000135.1	Protein Homology	CDS	117482	118141	.	+	0	ID=cds-WP_000268444.1;Parent=gene-C9E94_RS22255;Dbxref=GenBank:WP_000268444.1;Name=WP_000268444.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462077.1;locus_tag=C9E94_RS22255;product=DedA family general envelope maintenance protein YghB;protein_id=WP_000268444.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	118205	119104	.	-	.	ID=gene-C9E94_RS22260;Name=C9E94_RS22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS22260;old_locus_tag=C9E94_22835
NZ_PYJR01000135.1	Protein Homology	CDS	118205	119104	.	-	0	ID=cds-WP_001078198.1;Parent=gene-C9E94_RS22260;Dbxref=GenBank:WP_001078198.1;Name=WP_001078198.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=C9E94_RS22260;product=AraC family transcriptional regulator;protein_id=WP_001078198.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	119297	120460	.	+	.	ID=gene-C9E94_RS22265;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=C9E94_RS22265;old_locus_tag=C9E94_22840
NZ_PYJR01000135.1	Protein Homology	CDS	119297	120460	.	+	0	ID=cds-WP_094889071.1;Parent=gene-C9E94_RS22265;Dbxref=GenBank:WP_094889071.1;Name=WP_094889071.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462079.1;locus_tag=C9E94_RS22265;product=alcohol dehydrogenase;protein_id=WP_094889071.1;transl_table=11
NZ_PYJR01000135.1	RefSeq	gene	120566	121393	.	+	.	ID=gene-C9E94_RS22270;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=C9E94_RS22270;old_locus_tag=C9E94_22845
NZ_PYJR01000135.1	Protein Homology	CDS	120566	121393	.	+	0	ID=cds-WP_000013100.1;Parent=gene-C9E94_RS22270;Dbxref=GenBank:WP_000013100.1;Name=WP_000013100.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=C9E94_RS22270;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_000013100.1;transl_table=11
##sequence-region NZ_PYJR01000074.1 1 18300
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000074.1	RefSeq	region	1	18300	.	+	.	ID=NZ_PYJR01000074.1:1..18300;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000074.1	RefSeq	gene	143	1240	.	-	.	ID=gene-C9E94_RS09525;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=C9E94_RS09525;old_locus_tag=C9E94_09745
NZ_PYJR01000074.1	Protein Homology	CDS	143	1240	.	-	0	ID=cds-WP_000678626.1;Parent=gene-C9E94_RS09525;Dbxref=GenBank:WP_000678626.1;Name=WP_000678626.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=C9E94_RS09525;product=murein transglycosylase A;protein_id=WP_000678626.1;transl_table=11
NZ_PYJR01000074.1	RefSeq	gene	1448	1524	.	+	.	ID=gene-C9E94_RS09530;Name=C9E94_RS09530;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS09530;old_locus_tag=C9E94_09750
NZ_PYJR01000074.1	tRNAscan-SE	tRNA	1448	1524	.	+	.	ID=rna-C9E94_RS09530;Parent=gene-C9E94_RS09530;anticodon=(pos:1482..1484);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS09530;product=tRNA-Met
NZ_PYJR01000074.1	tRNAscan-SE	exon	1448	1524	.	+	.	ID=exon-C9E94_RS09530-1;Parent=rna-C9E94_RS09530;anticodon=(pos:1482..1484);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS09530;product=tRNA-Met
NZ_PYJR01000074.1	RefSeq	gene	1634	2887	.	-	.	ID=gene-C9E94_RS09535;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=C9E94_RS09535;old_locus_tag=C9E94_09755
NZ_PYJR01000074.1	Protein Homology	CDS	1634	2887	.	-	0	ID=cds-WP_031604949.1;Parent=gene-C9E94_RS09535;Dbxref=GenBank:WP_031604949.1;Name=WP_031604949.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461908.1;locus_tag=C9E94_RS09535;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_031604949.1;transl_table=11
NZ_PYJR01000074.1	RefSeq	gene	3120	4451	.	+	.	ID=gene-C9E94_RS09540;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=C9E94_RS09540;old_locus_tag=C9E94_09760
NZ_PYJR01000074.1	Protein Homology	CDS	3120	4451	.	+	0	ID=cds-WP_000588964.1;Parent=gene-C9E94_RS09540;Dbxref=GenBank:WP_000588964.1;Name=WP_000588964.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461909.1;locus_tag=C9E94_RS09540;product=amino-acid N-acetyltransferase;protein_id=WP_000588964.1;transl_table=11
NZ_PYJR01000074.1	RefSeq	gene	4553	6388	.	-	.	ID=gene-C9E94_RS09545;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=C9E94_RS09545;old_locus_tag=C9E94_09765
NZ_PYJR01000074.1	Protein Homology	CDS	4553	6388	.	-	0	ID=cds-WP_031604950.1;Parent=gene-C9E94_RS09545;Dbxref=GenBank:WP_031604950.1;Name=WP_031604950.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155145.1;locus_tag=C9E94_RS09545;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_031604950.1;transl_table=11
NZ_PYJR01000074.1	RefSeq	gene	6385	9930	.	-	.	ID=gene-C9E94_RS09550;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=C9E94_RS09550;old_locus_tag=C9E94_09770
NZ_PYJR01000074.1	Protein Homology	CDS	6385	9930	.	-	0	ID=cds-WP_094889088.1;Parent=gene-C9E94_RS09550;Dbxref=GenBank:WP_094889088.1;Name=WP_094889088.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461911.1;locus_tag=C9E94_RS09550;product=exodeoxyribonuclease V subunit beta;protein_id=WP_094889088.1;transl_table=11
NZ_PYJR01000074.1	RefSeq	gene	9923	12811	.	-	.	ID=gene-C9E94_RS09555;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=C9E94_RS09555;old_locus_tag=C9E94_09775
NZ_PYJR01000074.1	Protein Homology	CDS	9923	12811	.	-	0	ID=cds-WP_135400966.1;Parent=gene-C9E94_RS09555;Dbxref=GenBank:WP_135400966.1;Name=WP_135400966.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461912.1;locus_tag=C9E94_RS09555;product=pitrilysin;protein_id=WP_135400966.1;transl_table=11
NZ_PYJR01000074.1	RefSeq	gene	12989	16360	.	-	.	ID=gene-C9E94_RS09560;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=C9E94_RS09560;old_locus_tag=C9E94_09780
NZ_PYJR01000074.1	Protein Homology	CDS	12989	16360	.	-	0	ID=cds-WP_080190984.1;Parent=gene-C9E94_RS09560;Dbxref=GenBank:WP_080190984.1;Name=WP_080190984.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461913.2;locus_tag=C9E94_RS09560;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_080190984.1;transl_table=11
NZ_PYJR01000074.1	RefSeq	gene	16376	16696	.	-	.	ID=gene-C9E94_RS09565;Name=C9E94_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09565;old_locus_tag=C9E94_09785
NZ_PYJR01000074.1	Protein Homology	CDS	16376	16696	.	-	0	ID=cds-WP_000019286.1;Parent=gene-C9E94_RS09565;Dbxref=GenBank:WP_000019286.1;Name=WP_000019286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461914.1;locus_tag=C9E94_RS09565;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_000019286.1;transl_table=11
NZ_PYJR01000074.1	RefSeq	gene	16681	17088	.	-	.	ID=gene-C9E94_RS09570;Name=C9E94_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09570;old_locus_tag=C9E94_09790
NZ_PYJR01000074.1	Protein Homology	CDS	16681	17088	.	-	0	ID=cds-WP_114064050.1;Parent=gene-C9E94_RS09570;Dbxref=GenBank:WP_114064050.1;Name=WP_114064050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461915.1;locus_tag=C9E94_RS09570;product=DUF2509 family protein;protein_id=WP_114064050.1;transl_table=11
NZ_PYJR01000074.1	RefSeq	gene	17085	17648	.	-	.	ID=gene-C9E94_RS09575;Name=C9E94_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09575;old_locus_tag=C9E94_09795
NZ_PYJR01000074.1	Protein Homology	CDS	17085	17648	.	-	0	ID=cds-WP_000029153.1;Parent=gene-C9E94_RS09575;Dbxref=GenBank:WP_000029153.1;Name=WP_000029153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461916.1;locus_tag=C9E94_RS09575;product=prepilin peptidase-dependent protein;protein_id=WP_000029153.1;transl_table=11
NZ_PYJR01000074.1	RefSeq	gene	17639	18109	.	-	.	ID=gene-C9E94_RS09580;Name=C9E94_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09580;old_locus_tag=C9E94_09800
NZ_PYJR01000074.1	Protein Homology	CDS	17639	18109	.	-	0	ID=cds-WP_000744668.1;Parent=gene-C9E94_RS09580;Dbxref=GenBank:WP_000744668.1;Name=WP_000744668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077605.1;locus_tag=C9E94_RS09580;product=prepilin peptidase-dependent protein;protein_id=WP_000744668.1;transl_table=11
##sequence-region NZ_PYJR01000102.1 1 17255
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000102.1	RefSeq	region	1	17255	.	+	.	ID=NZ_PYJR01000102.1:1..17255;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000102.1	RefSeq	gene	565	1293	.	+	.	ID=gene-C9E94_RS15195;Name=C9E94_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15195;old_locus_tag=C9E94_15575
NZ_PYJR01000102.1	Protein Homology	CDS	565	1293	.	+	0	ID=cds-WP_023237621.1;Parent=gene-C9E94_RS15195;Dbxref=GenBank:WP_023237621.1;Name=WP_023237621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463061.1;locus_tag=C9E94_RS15195;product=hypothetical protein;protein_id=WP_023237621.1;transl_table=11
NZ_PYJR01000102.1	RefSeq	gene	1555	2496	.	+	.	ID=gene-C9E94_RS15200;Name=panS;gbkey=Gene;gene=panS;gene_biotype=protein_coding;locus_tag=C9E94_RS15200;old_locus_tag=C9E94_15580
NZ_PYJR01000102.1	Protein Homology	CDS	1555	2496	.	+	0	ID=cds-WP_000881647.1;Parent=gene-C9E94_RS15200;Dbxref=GenBank:WP_000881647.1;Name=WP_000881647.1;gbkey=CDS;gene=panS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463060.1;locus_tag=C9E94_RS15200;product=ketopantoate/pantoate/pantothenate transporter PanS;protein_id=WP_000881647.1;transl_table=11
NZ_PYJR01000102.1	RefSeq	gene	2594	2866	.	+	.	ID=gene-C9E94_RS15205;Name=C9E94_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15205;old_locus_tag=C9E94_15585
NZ_PYJR01000102.1	Protein Homology	CDS	2594	2866	.	+	0	ID=cds-WP_001207628.1;Parent=gene-C9E94_RS15205;Dbxref=GenBank:WP_001207628.1;Name=WP_001207628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463059.1;locus_tag=C9E94_RS15205;product=DUF3811 domain-containing protein;protein_id=WP_001207628.1;transl_table=11
NZ_PYJR01000102.1	RefSeq	gene	2863	3732	.	-	.	ID=gene-C9E94_RS15210;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=C9E94_RS15210;old_locus_tag=C9E94_15590
NZ_PYJR01000102.1	Protein Homology	CDS	2863	3732	.	-	0	ID=cds-WP_079899289.1;Parent=gene-C9E94_RS15210;Dbxref=GenBank:WP_079899289.1;Name=WP_079899289.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463058.1;locus_tag=C9E94_RS15210;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_079899289.1;transl_table=11
NZ_PYJR01000102.1	RefSeq	gene	3779	4318	.	-	.	ID=gene-C9E94_RS15215;Name=C9E94_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15215;old_locus_tag=C9E94_15595
NZ_PYJR01000102.1	Protein Homology	CDS	3779	4318	.	-	0	ID=cds-WP_001096724.1;Parent=gene-C9E94_RS15215;Dbxref=GenBank:WP_001096724.1;Name=WP_001096724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=C9E94_RS15215;product=DUF2058 domain-containing protein;protein_id=WP_001096724.1;transl_table=11
NZ_PYJR01000102.1	RefSeq	gene	4353	4454	.	-	.	ID=gene-C9E94_RS15220;Name=C9E94_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15220;old_locus_tag=C9E94_15600
NZ_PYJR01000102.1	Protein Homology	CDS	4353	4454	.	-	0	ID=cds-WP_001576533.1;Parent=gene-C9E94_RS15220;Dbxref=GenBank:WP_001576533.1;Name=WP_001576533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463056.1;locus_tag=C9E94_RS15220;product=hypothetical protein;protein_id=WP_001576533.1;transl_table=11
NZ_PYJR01000102.1	RefSeq	gene	4526	5215	.	+	.	ID=gene-C9E94_RS15225;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=C9E94_RS15225;old_locus_tag=C9E94_15605
NZ_PYJR01000102.1	Protein Homology	CDS	4526	5215	.	+	0	ID=cds-WP_000421776.1;Parent=gene-C9E94_RS15225;Dbxref=GenBank:WP_000421776.1;Name=WP_000421776.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463055.1;locus_tag=C9E94_RS15225;product=dipeptidase PepE;protein_id=WP_000421776.1;transl_table=11
NZ_PYJR01000102.1	RefSeq	gene	5291	6922	.	-	.	ID=gene-C9E94_RS15230;Name=C9E94_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15230;old_locus_tag=C9E94_15610
NZ_PYJR01000102.1	Protein Homology	CDS	5291	6922	.	-	0	ID=cds-WP_000956811.1;Parent=gene-C9E94_RS15230;Dbxref=GenBank:WP_000956811.1;Name=WP_000956811.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463054.1;locus_tag=C9E94_RS15230;product=Na/Pi cotransporter family protein;protein_id=WP_000956811.1;transl_table=11
NZ_PYJR01000102.1	RefSeq	gene	7189	10872	.	-	.	ID=gene-C9E94_RS15235;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=C9E94_RS15235;old_locus_tag=C9E94_15615
NZ_PYJR01000102.1	Protein Homology	CDS	7189	10872	.	-	0	ID=cds-WP_135401118.1;Parent=gene-C9E94_RS15235;Dbxref=GenBank:WP_135401118.1;Name=WP_135401118.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312964.1;locus_tag=C9E94_RS15235;product=methionine synthase;protein_id=WP_135401118.1;transl_table=11
NZ_PYJR01000102.1	RefSeq	gene	11176	12000	.	+	.	ID=gene-C9E94_RS15240;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=C9E94_RS15240;old_locus_tag=C9E94_15620
NZ_PYJR01000102.1	Protein Homology	CDS	11176	12000	.	+	0	ID=cds-WP_000226434.1;Parent=gene-C9E94_RS15240;Dbxref=GenBank:WP_000226434.1;Name=WP_000226434.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463052.1;locus_tag=C9E94_RS15240;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_000226434.1;transl_table=11
NZ_PYJR01000102.1	RefSeq	gene	12011	12418	.	+	.	ID=gene-C9E94_RS15245;Name=C9E94_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS15245;old_locus_tag=C9E94_15625
NZ_PYJR01000102.1	Protein Homology	CDS	12011	12418	.	+	0	ID=cds-WP_010989091.1;Parent=gene-C9E94_RS15245;Dbxref=GenBank:WP_010989091.1;Name=WP_010989091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463051.1;locus_tag=C9E94_RS15245;product=ASCH domain-containing protein;protein_id=WP_010989091.1;transl_table=11
NZ_PYJR01000102.1	RefSeq	gene	12382	14133	.	-	.	ID=gene-C9E94_RS15250;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=C9E94_RS15250;old_locus_tag=C9E94_15630
NZ_PYJR01000102.1	Protein Homology	CDS	12382	14133	.	-	0	ID=cds-WP_080108914.1;Parent=gene-C9E94_RS15250;Dbxref=GenBank:WP_080108914.1;Name=WP_080108914.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463050.1;locus_tag=C9E94_RS15250;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_080108914.1;transl_table=11
NZ_PYJR01000102.1	RefSeq	gene	14235	15539	.	-	.	ID=gene-C9E94_RS15255;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=C9E94_RS15255;old_locus_tag=C9E94_15635
NZ_PYJR01000102.1	Protein Homology	CDS	14235	15539	.	-	0	ID=cds-WP_000857882.1;Parent=gene-C9E94_RS15255;Dbxref=GenBank:WP_000857882.1;Name=WP_000857882.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=C9E94_RS15255;product=isocitrate lyase;protein_id=WP_000857882.1;transl_table=11
NZ_PYJR01000102.1	RefSeq	gene	15571	17172	.	-	.	ID=gene-C9E94_RS15260;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=C9E94_RS15260;old_locus_tag=C9E94_15640
NZ_PYJR01000102.1	Protein Homology	CDS	15571	17172	.	-	0	ID=cds-WP_023204793.1;Parent=gene-C9E94_RS15260;Dbxref=GenBank:WP_023204793.1;Name=WP_023204793.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463048.1;locus_tag=C9E94_RS15260;product=malate synthase A;protein_id=WP_023204793.1;transl_table=11
##sequence-region NZ_PYJR01000007.1 1 17170
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000007.1	RefSeq	region	1	17170	.	+	.	ID=NZ_PYJR01000007.1:1..17170;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000007.1	RefSeq	gene	238	342	.	+	.	ID=gene-C9E94_RS00515;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=C9E94_RS00515
NZ_PYJR01000007.1	Protein Homology	CDS	238	342	.	+	0	ID=cds-WP_015632840.1;Parent=gene-C9E94_RS00515;Dbxref=GenBank:WP_015632840.1;Name=WP_015632840.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=C9E94_RS00515;product=leader peptide SpeFL;protein_id=WP_015632840.1;transl_table=11
NZ_PYJR01000007.1	RefSeq	gene	722	2920	.	+	.	ID=gene-C9E94_RS00520;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=C9E94_RS00520;old_locus_tag=C9E94_00525
NZ_PYJR01000007.1	Protein Homology	CDS	722	2920	.	+	0	ID=cds-WP_023240726.1;Parent=gene-C9E94_RS00520;Dbxref=GenBank:WP_023240726.1;Name=WP_023240726.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=C9E94_RS00520;product=ornithine decarboxylase SpeF;protein_id=WP_023240726.1;transl_table=11
NZ_PYJR01000007.1	RefSeq	gene	2917	4236	.	+	.	ID=gene-C9E94_RS00525;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=C9E94_RS00525;old_locus_tag=C9E94_00530
NZ_PYJR01000007.1	Protein Homology	CDS	2917	4236	.	+	0	ID=cds-WP_000042658.1;Parent=gene-C9E94_RS00525;Dbxref=GenBank:WP_000042658.1;Name=WP_000042658.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459685.1;locus_tag=C9E94_RS00525;product=putrescine-ornithine antiporter;protein_id=WP_000042658.1;transl_table=11
NZ_PYJR01000007.1	RefSeq	gene	4301	4786	.	+	.	ID=gene-C9E94_RS00530;Name=C9E94_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00530;old_locus_tag=C9E94_00535
NZ_PYJR01000007.1	Protein Homology	CDS	4301	4786	.	+	0	ID=cds-WP_000070056.1;Parent=gene-C9E94_RS00530;Dbxref=GenBank:WP_000070056.1;Name=WP_000070056.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459684.1;locus_tag=C9E94_RS00530;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_000070056.1;transl_table=11
NZ_PYJR01000007.1	RefSeq	gene	4901	6541	.	-	.	ID=gene-C9E94_RS00535;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=C9E94_RS00535;old_locus_tag=C9E94_00540
NZ_PYJR01000007.1	Protein Homology	CDS	4901	6541	.	-	0	ID=cds-WP_000974385.1;Parent=gene-C9E94_RS00535;Dbxref=GenBank:WP_000974385.1;Name=WP_000974385.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459683.1;locus_tag=C9E94_RS00535;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_000974385.1;transl_table=11
NZ_PYJR01000007.1	RefSeq	gene	6566	7108	.	-	.	ID=gene-C9E94_RS00540;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=C9E94_RS00540;old_locus_tag=C9E94_00545
NZ_PYJR01000007.1	Protein Homology	CDS	6566	7108	.	-	0	ID=cds-WP_000848395.1;Parent=gene-C9E94_RS00540;Dbxref=GenBank:WP_000848395.1;Name=WP_000848395.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459682.1;locus_tag=C9E94_RS00540;product=replication initiation negative regulator SeqA;protein_id=WP_000848395.1;transl_table=11
NZ_PYJR01000007.1	RefSeq	gene	7293	8063	.	+	.	ID=gene-C9E94_RS00545;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=C9E94_RS00545;old_locus_tag=C9E94_00550
NZ_PYJR01000007.1	Protein Homology	CDS	7293	8063	.	+	0	ID=cds-WP_000773245.1;Parent=gene-C9E94_RS00545;Dbxref=GenBank:WP_000773245.1;Name=WP_000773245.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459681.1;locus_tag=C9E94_RS00545;product=esterase;protein_id=WP_000773245.1;transl_table=11
NZ_PYJR01000007.1	RefSeq	gene	8197	8490	.	+	.	ID=gene-C9E94_RS00550;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=C9E94_RS00550;old_locus_tag=C9E94_00555
NZ_PYJR01000007.1	Protein Homology	CDS	8197	8490	.	+	0	ID=cds-WP_001040939.1;Parent=gene-C9E94_RS00550;Dbxref=GenBank:WP_001040939.1;Name=WP_001040939.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459680.1;locus_tag=C9E94_RS00550;product=LexA regulated protein;protein_id=WP_001040939.1;transl_table=11
NZ_PYJR01000007.1	RefSeq	gene	8641	9171	.	+	.	ID=gene-C9E94_RS00555;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=C9E94_RS00555;old_locus_tag=C9E94_00560
NZ_PYJR01000007.1	Protein Homology	CDS	8641	9171	.	+	0	ID=cds-WP_001018621.1;Parent=gene-C9E94_RS00555;Dbxref=GenBank:WP_001018621.1;Name=WP_001018621.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459679.1;locus_tag=C9E94_RS00555;product=flavodoxin FldA;protein_id=WP_001018621.1;transl_table=11
NZ_PYJR01000007.1	RefSeq	pseudogene	9375	9460	.	+	.	ID=gene-C9E94_RS23405;Name=C9E94_RS23405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23405;pseudo=true
NZ_PYJR01000007.1	Protein Homology	CDS	9375	9460	.	+	0	ID=cds-C9E94_RS23405;Parent=gene-C9E94_RS23405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=C9E94_RS23405;product=fur leader peptide;pseudo=true;transl_table=11
NZ_PYJR01000007.1	RefSeq	gene	9453	9905	.	+	.	ID=gene-C9E94_RS00560;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=C9E94_RS00560;old_locus_tag=C9E94_00565
NZ_PYJR01000007.1	Protein Homology	CDS	9453	9905	.	+	0	ID=cds-WP_000131699.1;Parent=gene-C9E94_RS00560;Dbxref=GenBank:WP_000131699.1;Name=WP_000131699.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459678.1;locus_tag=C9E94_RS00560;product=ferric iron uptake transcriptional regulator;protein_id=WP_000131699.1;transl_table=11
NZ_PYJR01000007.1	RefSeq	gene	10020	10946	.	+	.	ID=gene-C9E94_RS00565;Name=tcuR;gbkey=Gene;gene=tcuR;gene_biotype=protein_coding;locus_tag=C9E94_RS00565;old_locus_tag=C9E94_00570
NZ_PYJR01000007.1	Protein Homology	CDS	10020	10946	.	+	0	ID=cds-WP_000423371.1;Parent=gene-C9E94_RS00565;Dbxref=GenBank:WP_000423371.1;Name=WP_000423371.1;gbkey=CDS;gene=tcuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459677.1;locus_tag=C9E94_RS00565;product=tricarballylate utilization LysR family transcriptional regulator TcuR;protein_id=WP_000423371.1;transl_table=11
NZ_PYJR01000007.1	RefSeq	gene	11044	12447	.	+	.	ID=gene-C9E94_RS00570;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=C9E94_RS00570;old_locus_tag=C9E94_00575
NZ_PYJR01000007.1	Protein Homology	CDS	11044	12447	.	+	0	ID=cds-WP_000228705.1;Parent=gene-C9E94_RS00570;Dbxref=GenBank:WP_000228705.1;Name=WP_000228705.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459676.1;locus_tag=C9E94_RS00570;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=WP_000228705.1;transl_table=11
NZ_PYJR01000007.1	RefSeq	gene	12434	13573	.	+	.	ID=gene-C9E94_RS00575;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=C9E94_RS00575;old_locus_tag=C9E94_00580
NZ_PYJR01000007.1	Protein Homology	CDS	12434	13573	.	+	0	ID=cds-WP_017465563.1;Parent=gene-C9E94_RS00575;Dbxref=GenBank:WP_017465563.1;Name=WP_017465563.1;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459675.1;locus_tag=C9E94_RS00575;product=tricarballylate utilization protein TcuB;protein_id=WP_017465563.1;transl_table=11
NZ_PYJR01000007.1	RefSeq	gene	13624	14928	.	+	.	ID=gene-C9E94_RS00580;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=C9E94_RS00580;old_locus_tag=C9E94_00585
NZ_PYJR01000007.1	Protein Homology	CDS	13624	14928	.	+	0	ID=cds-WP_000057014.1;Parent=gene-C9E94_RS00580;Dbxref=GenBank:WP_000057014.1;Name=WP_000057014.1;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459674.1;locus_tag=C9E94_RS00580;product=tricarballylate/proton symporter TcuC;protein_id=WP_000057014.1;transl_table=11
NZ_PYJR01000007.1	RefSeq	gene	14977	15309	.	-	.	ID=gene-C9E94_RS00585;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=C9E94_RS00585;old_locus_tag=C9E94_00590
NZ_PYJR01000007.1	Protein Homology	CDS	14977	15309	.	-	0	ID=cds-WP_000722260.1;Parent=gene-C9E94_RS00585;Dbxref=GenBank:WP_000722260.1;Name=WP_000722260.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459673.1;locus_tag=C9E94_RS00585;product=ChiQ/YbfN family lipoprotein;protein_id=WP_000722260.1;transl_table=11
NZ_PYJR01000007.1	RefSeq	gene	15359	16765	.	-	.	ID=gene-C9E94_RS00590;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=C9E94_RS00590;old_locus_tag=C9E94_00595
NZ_PYJR01000007.1	Protein Homology	CDS	15359	16765	.	-	0	ID=cds-WP_001258803.1;Parent=gene-C9E94_RS00590;Dbxref=GenBank:WP_001258803.1;Name=WP_001258803.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459672.1;locus_tag=C9E94_RS00590;product=chitoporin ChiP;protein_id=WP_001258803.1;transl_table=11
##sequence-region NZ_PYJR01000078.1 1 16537
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000078.1	RefSeq	region	1	16537	.	+	.	ID=NZ_PYJR01000078.1:1..16537;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000078.1	RefSeq	gene	239	315	.	+	.	ID=gene-C9E94_RS09880;Name=C9E94_RS09880;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS09880;old_locus_tag=C9E94_10095
NZ_PYJR01000078.1	tRNAscan-SE	tRNA	239	315	.	+	.	ID=rna-C9E94_RS09880;Parent=gene-C9E94_RS09880;anticodon=(pos:273..275);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS09880;product=tRNA-Asp
NZ_PYJR01000078.1	tRNAscan-SE	exon	239	315	.	+	.	ID=exon-C9E94_RS09880-1;Parent=rna-C9E94_RS09880;anticodon=(pos:273..275);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS09880;product=tRNA-Asp
NZ_PYJR01000078.1	RefSeq	gene	480	1283	.	+	.	ID=gene-C9E94_RS09885;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=C9E94_RS09885;old_locus_tag=C9E94_10100
NZ_PYJR01000078.1	Protein Homology	CDS	480	1283	.	+	0	ID=cds-WP_135400969.1;Parent=gene-C9E94_RS09885;Dbxref=GenBank:WP_135400969.1;Name=WP_135400969.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459253.1;locus_tag=C9E94_RS09885;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_135400969.1;transl_table=11
NZ_PYJR01000078.1	RefSeq	gene	1304	2218	.	-	.	ID=gene-C9E94_RS09890;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=C9E94_RS09890;old_locus_tag=C9E94_10105
NZ_PYJR01000078.1	Protein Homology	CDS	1304	2218	.	-	0	ID=cds-WP_001647892.1;Parent=gene-C9E94_RS09890;Dbxref=GenBank:WP_001647892.1;Name=WP_001647892.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459254.1;locus_tag=C9E94_RS09890;product=DNA-binding transcriptional regulator YafC;protein_id=WP_001647892.1;transl_table=11
NZ_PYJR01000078.1	RefSeq	gene	2323	3498	.	+	.	ID=gene-C9E94_RS09895;Name=C9E94_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09895;old_locus_tag=C9E94_10110
NZ_PYJR01000078.1	Protein Homology	CDS	2323	3498	.	+	0	ID=cds-WP_080219755.1;Parent=gene-C9E94_RS09895;Dbxref=GenBank:WP_080219755.1;Name=WP_080219755.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459255.1;locus_tag=C9E94_RS09895;product=MFS transporter;protein_id=WP_080219755.1;transl_table=11
NZ_PYJR01000078.1	RefSeq	gene	3630	4430	.	+	.	ID=gene-C9E94_RS09900;Name=C9E94_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09900;old_locus_tag=C9E94_10115
NZ_PYJR01000078.1	Protein Homology	CDS	3630	4430	.	+	0	ID=cds-WP_001230970.1;Parent=gene-C9E94_RS09900;Dbxref=GenBank:WP_001230970.1;Name=WP_001230970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=C9E94_RS09900;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001230970.1;transl_table=11
NZ_PYJR01000078.1	RefSeq	gene	4508	5278	.	+	.	ID=gene-C9E94_RS09905;Name=C9E94_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09905;old_locus_tag=C9E94_10120
NZ_PYJR01000078.1	Protein Homology	CDS	4508	5278	.	+	0	ID=cds-WP_000207222.1;Parent=gene-C9E94_RS09905;Dbxref=GenBank:WP_000207222.1;Name=WP_000207222.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459257.1;locus_tag=C9E94_RS09905;product=class I SAM-dependent methyltransferase;protein_id=WP_000207222.1;transl_table=11
NZ_PYJR01000078.1	RefSeq	gene	5334	6701	.	-	.	ID=gene-C9E94_RS09910;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=C9E94_RS09910;old_locus_tag=C9E94_10125
NZ_PYJR01000078.1	Protein Homology	CDS	5334	6701	.	-	0	ID=cds-WP_000644706.1;Parent=gene-C9E94_RS09910;Dbxref=GenBank:WP_000644706.1;Name=WP_000644706.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459258.1;locus_tag=C9E94_RS09910;product=murein transglycosylase D;protein_id=WP_000644706.1;transl_table=11
NZ_PYJR01000078.1	RefSeq	gene	6773	7528	.	-	.	ID=gene-C9E94_RS09915;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=C9E94_RS09915;old_locus_tag=C9E94_10130
NZ_PYJR01000078.1	Protein Homology	CDS	6773	7528	.	-	0	ID=cds-WP_001052773.1;Parent=gene-C9E94_RS09915;Dbxref=GenBank:WP_001052773.1;Name=WP_001052773.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459259.1;locus_tag=C9E94_RS09915;product=hydroxyacylglutathione hydrolase;protein_id=WP_001052773.1;transl_table=11
NZ_PYJR01000078.1	RefSeq	gene	7563	8285	.	+	.	ID=gene-C9E94_RS09920;Name=C9E94_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09920;old_locus_tag=C9E94_10135
NZ_PYJR01000078.1	Protein Homology	CDS	7563	8285	.	+	0	ID=cds-WP_000801238.1;Parent=gene-C9E94_RS09920;Dbxref=GenBank:WP_000801238.1;Name=WP_000801238.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459260.1;locus_tag=C9E94_RS09920;product=class I SAM-dependent methyltransferase;protein_id=WP_000801238.1;transl_table=11
NZ_PYJR01000078.1	RefSeq	gene	8282	8749	.	-	.	ID=gene-C9E94_RS09925;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=C9E94_RS09925;old_locus_tag=C9E94_10140
NZ_PYJR01000078.1	Protein Homology	CDS	8282	8749	.	-	0	ID=cds-WP_135400970.1;Parent=gene-C9E94_RS09925;Dbxref=GenBank:WP_135400970.1;Name=WP_135400970.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459261.1;locus_tag=C9E94_RS09925;product=ribonuclease HI;protein_id=WP_135400970.1;transl_table=11
NZ_PYJR01000078.1	RefSeq	gene	8813	9544	.	+	.	ID=gene-C9E94_RS09930;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=C9E94_RS09930;old_locus_tag=C9E94_10145
NZ_PYJR01000078.1	Protein Homology	CDS	8813	9544	.	+	0	ID=cds-WP_001670675.1;Parent=gene-C9E94_RS09930;Dbxref=GenBank:WP_001670675.1;Name=WP_001670675.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459262.1;locus_tag=C9E94_RS09930;product=DNA polymerase III subunit epsilon;protein_id=WP_001670675.1;transl_table=11
NZ_PYJR01000078.1	RefSeq	gene	9678	9754	.	+	.	ID=gene-C9E94_RS09935;Name=C9E94_RS09935;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS09935;old_locus_tag=C9E94_10150
NZ_PYJR01000078.1	tRNAscan-SE	tRNA	9678	9754	.	+	.	ID=rna-C9E94_RS09935;Parent=gene-C9E94_RS09935;anticodon=(pos:9712..9714);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS09935;product=tRNA-Asp
NZ_PYJR01000078.1	tRNAscan-SE	exon	9678	9754	.	+	.	ID=exon-C9E94_RS09935-1;Parent=rna-C9E94_RS09935;anticodon=(pos:9712..9714);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS09935;product=tRNA-Asp
NZ_PYJR01000078.1	RefSeq	gene	10075	11130	.	-	.	ID=gene-C9E94_RS09945;Name=C9E94_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09945;old_locus_tag=C9E94_10160
NZ_PYJR01000078.1	Protein Homology	CDS	10075	11130	.	-	0	ID=cds-WP_135400971.1;Parent=gene-C9E94_RS09945;Dbxref=GenBank:WP_135400971.1;Name=WP_135400971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459263.1;locus_tag=C9E94_RS09945;product=ImpA family type VI secretion system protein;protein_id=WP_135400971.1;transl_table=11
NZ_PYJR01000078.1	RefSeq	gene	11141	12136	.	-	.	ID=gene-C9E94_RS09950;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=C9E94_RS09950;old_locus_tag=C9E94_10165
NZ_PYJR01000078.1	Protein Homology	CDS	11141	12136	.	-	0	ID=cds-WP_000145239.1;Parent=gene-C9E94_RS09950;Dbxref=GenBank:WP_000145239.1;Name=WP_000145239.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459264.1;locus_tag=C9E94_RS09950;product=type VI secretion system baseplate subunit TssG;protein_id=WP_000145239.1;transl_table=11
NZ_PYJR01000078.1	RefSeq	gene	12133	14016	.	-	.	ID=gene-C9E94_RS09955;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=C9E94_RS09955;old_locus_tag=C9E94_10170
NZ_PYJR01000078.1	Protein Homology	CDS	12133	14016	.	-	0	ID=cds-WP_135400972.1;Parent=gene-C9E94_RS09955;Dbxref=GenBank:WP_135400972.1;Name=WP_135400972.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459265.1;locus_tag=C9E94_RS09955;product=type VI secretion system baseplate subunit TssF;protein_id=WP_135400972.1;transl_table=11
NZ_PYJR01000078.1	RefSeq	gene	14032	14526	.	-	.	ID=gene-C9E94_RS09960;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=C9E94_RS09960;old_locus_tag=C9E94_10175
NZ_PYJR01000078.1	Protein Homology	CDS	14032	14526	.	-	0	ID=cds-WP_000108009.1;Parent=gene-C9E94_RS09960;Dbxref=GenBank:WP_000108009.1;Name=WP_000108009.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459266.1;locus_tag=C9E94_RS09960;product=type VI secretion system baseplate subunit TssE;protein_id=WP_000108009.1;transl_table=11
NZ_PYJR01000078.1	RefSeq	gene	14523	15347	.	-	.	ID=gene-C9E94_RS09965;Name=C9E94_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09965;old_locus_tag=C9E94_10180
NZ_PYJR01000078.1	Protein Homology	CDS	14523	15347	.	-	0	ID=cds-WP_135400973.1;Parent=gene-C9E94_RS09965;Dbxref=GenBank:WP_135400973.1;Name=WP_135400973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459267.1;locus_tag=C9E94_RS09965;product=type VI secretion system accessory protein TagJ;protein_id=WP_135400973.1;transl_table=11
NZ_PYJR01000078.1	RefSeq	gene	15334	16236	.	-	.	ID=gene-C9E94_RS09970;Name=tagK;gbkey=Gene;gene=tagK;gene_biotype=protein_coding;locus_tag=C9E94_RS09970;old_locus_tag=C9E94_10185
NZ_PYJR01000078.1	Protein Homology	CDS	15334	16236	.	-	0	ID=cds-WP_135400974.1;Parent=gene-C9E94_RS09970;Dbxref=GenBank:WP_135400974.1;Name=WP_135400974.1;gbkey=CDS;gene=tagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459268.1;locus_tag=C9E94_RS09970;product=type VI secretion system-associated protein TagK;protein_id=WP_135400974.1;transl_table=11
##sequence-region NZ_PYJR01000028.1 1 15972
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000028.1	RefSeq	region	1	15972	.	+	.	ID=NZ_PYJR01000028.1:1..15972;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000028.1	RefSeq	gene	1	770	.	+	.	ID=gene-C9E94_RS02720;Name=C9E94_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02720;old_locus_tag=C9E94_02795;partial=true;start_range=.,1
NZ_PYJR01000028.1	Protein Homology	CDS	1	770	.	+	2	ID=cds-WP_224190465.1;Parent=gene-C9E94_RS02720;Dbxref=GenBank:WP_224190465.1;Name=WP_224190465.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=C9E94_RS02720;partial=true;product=GntR family transcriptional regulator;protein_id=WP_224190465.1;start_range=.,1;transl_table=11
NZ_PYJR01000028.1	RefSeq	gene	853	1581	.	+	.	ID=gene-C9E94_RS02725;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=C9E94_RS02725;old_locus_tag=C9E94_02800
NZ_PYJR01000028.1	Protein Homology	CDS	853	1581	.	+	0	ID=cds-WP_001091009.1;Parent=gene-C9E94_RS02725;Dbxref=GenBank:WP_001091009.1;Name=WP_001091009.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461218.1;locus_tag=C9E94_RS02725;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_001091009.1;transl_table=11
NZ_PYJR01000028.1	RefSeq	gene	1937	4222	.	+	.	ID=gene-C9E94_RS02730;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=C9E94_RS02730;old_locus_tag=C9E94_02805
NZ_PYJR01000028.1	Protein Homology	CDS	1937	4222	.	+	0	ID=cds-WP_001076487.1;Parent=gene-C9E94_RS02730;Dbxref=GenBank:WP_001076487.1;Name=WP_001076487.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=C9E94_RS02730;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_001076487.1;transl_table=11
NZ_PYJR01000028.1	RefSeq	gene	4335	5465	.	+	.	ID=gene-C9E94_RS02735;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=C9E94_RS02735;old_locus_tag=C9E94_02810
NZ_PYJR01000028.1	Protein Homology	CDS	4335	5465	.	+	0	ID=cds-WP_000332026.1;Parent=gene-C9E94_RS02735;Dbxref=GenBank:WP_000332026.1;Name=WP_000332026.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=C9E94_RS02735;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000332026.1;transl_table=11
NZ_PYJR01000028.1	RefSeq	gene	5465	5719	.	+	.	ID=gene-C9E94_RS02740;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=C9E94_RS02740;old_locus_tag=C9E94_02815
NZ_PYJR01000028.1	Protein Homology	CDS	5465	5719	.	+	0	ID=cds-WP_000533921.1;Parent=gene-C9E94_RS02740;Dbxref=GenBank:WP_000533921.1;Name=WP_000533921.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461221.1;locus_tag=C9E94_RS02740;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000533921.1;transl_table=11
NZ_PYJR01000028.1	RefSeq	gene	5721	6911	.	-	.	ID=gene-C9E94_RS02745;Name=C9E94_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02745;old_locus_tag=C9E94_02820
NZ_PYJR01000028.1	Protein Homology	CDS	5721	6911	.	-	0	ID=cds-WP_000660244.1;Parent=gene-C9E94_RS02745;Dbxref=GenBank:WP_000660244.1;Name=WP_000660244.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461222.1;locus_tag=C9E94_RS02745;product=MFS transporter;protein_id=WP_000660244.1;transl_table=11
NZ_PYJR01000028.1	RefSeq	gene	7073	7951	.	+	.	ID=gene-C9E94_RS02750;Name=C9E94_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02750;old_locus_tag=C9E94_02825
NZ_PYJR01000028.1	Protein Homology	CDS	7073	7951	.	+	0	ID=cds-WP_000176719.1;Parent=gene-C9E94_RS02750;Dbxref=GenBank:WP_000176719.1;Name=WP_000176719.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461223.1;locus_tag=C9E94_RS02750;product=LysR family transcriptional regulator;protein_id=WP_000176719.1;transl_table=11
NZ_PYJR01000028.1	RefSeq	gene	8067	9137	.	-	.	ID=gene-C9E94_RS02755;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=C9E94_RS02755;old_locus_tag=C9E94_02830
NZ_PYJR01000028.1	Protein Homology	CDS	8067	9137	.	-	0	ID=cds-WP_135400798.1;Parent=gene-C9E94_RS02755;Dbxref=GenBank:WP_135400798.1;Name=WP_135400798.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461224.1;locus_tag=C9E94_RS02755;product=glycerophosphodiester phosphodiesterase;protein_id=WP_135400798.1;transl_table=11
NZ_PYJR01000028.1	RefSeq	gene	9142	10500	.	-	.	ID=gene-C9E94_RS02760;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=C9E94_RS02760;old_locus_tag=C9E94_02835
NZ_PYJR01000028.1	Protein Homology	CDS	9142	10500	.	-	0	ID=cds-WP_000948739.1;Parent=gene-C9E94_RS02760;Dbxref=GenBank:WP_000948739.1;Name=WP_000948739.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461225.1;locus_tag=C9E94_RS02760;product=glycerol-3-phosphate transporter;protein_id=WP_000948739.1;transl_table=11
NZ_PYJR01000028.1	RefSeq	gene	10773	12401	.	+	.	ID=gene-C9E94_RS02765;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=C9E94_RS02765;old_locus_tag=C9E94_02840
NZ_PYJR01000028.1	Protein Homology	CDS	10773	12401	.	+	0	ID=cds-WP_000857207.1;Parent=gene-C9E94_RS02765;Dbxref=GenBank:WP_000857207.1;Name=WP_000857207.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461226.1;locus_tag=C9E94_RS02765;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_000857207.1;transl_table=11
NZ_PYJR01000028.1	RefSeq	gene	12391	13650	.	+	.	ID=gene-C9E94_RS02770;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=C9E94_RS02770;old_locus_tag=C9E94_02845
NZ_PYJR01000028.1	Protein Homology	CDS	12391	13650	.	+	0	ID=cds-WP_000667152.1;Parent=gene-C9E94_RS02770;Dbxref=GenBank:WP_000667152.1;Name=WP_000667152.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461227.1;locus_tag=C9E94_RS02770;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_000667152.1;transl_table=11
NZ_PYJR01000028.1	RefSeq	gene	13647	14837	.	+	.	ID=gene-C9E94_RS02775;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=C9E94_RS02775;old_locus_tag=C9E94_02850
NZ_PYJR01000028.1	Protein Homology	CDS	13647	14837	.	+	0	ID=cds-WP_001285726.1;Parent=gene-C9E94_RS02775;Dbxref=GenBank:WP_001285726.1;Name=WP_001285726.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461228.1;locus_tag=C9E94_RS02775;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_001285726.1;transl_table=11
NZ_PYJR01000028.1	RefSeq	gene	15262	15972	.	+	.	ID=gene-C9E94_RS02785;Name=sseL;end_range=15972,.;gbkey=Gene;gene=sseL;gene_biotype=protein_coding;locus_tag=C9E94_RS02785;old_locus_tag=C9E94_02860;partial=true
NZ_PYJR01000028.1	Protein Homology	CDS	15262	15972	.	+	0	ID=cds-WP_167853638.1;Parent=gene-C9E94_RS02785;Dbxref=GenBank:WP_167853638.1;Name=WP_167853638.1;end_range=15972,.;gbkey=CDS;gene=sseL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017745.1;locus_tag=C9E94_RS02785;partial=true;product=SPI-2 type III secretion system effector deubiquitinase SseL;protein_id=WP_167853638.1;transl_table=11
##sequence-region NZ_PYJR01000088.1 1 15702
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000088.1	RefSeq	region	1	15702	.	+	.	ID=NZ_PYJR01000088.1:1..15702;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000088.1	RefSeq	gene	1	934	.	-	.	ID=gene-C9E94_RS11870;Name=C9E94_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11870;old_locus_tag=C9E94_12140;partial=true;start_range=.,1
NZ_PYJR01000088.1	Protein Homology	CDS	1	934	.	-	0	ID=cds-WP_135401039.1;Parent=gene-C9E94_RS11870;Dbxref=GenBank:WP_135401039.1;Name=WP_135401039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460741.1;locus_tag=C9E94_RS11870;partial=true;product=DUF4427 domain-containing protein;protein_id=WP_135401039.1;start_range=.,1;transl_table=11
NZ_PYJR01000088.1	RefSeq	gene	1429	2547	.	+	.	ID=gene-C9E94_RS11875;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=C9E94_RS11875;old_locus_tag=C9E94_12145
NZ_PYJR01000088.1	Protein Homology	CDS	1429	2547	.	+	0	ID=cds-WP_001058312.1;Parent=gene-C9E94_RS11875;Dbxref=GenBank:WP_001058312.1;Name=WP_001058312.1;gbkey=CDS;gene=hyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460742.1;locus_tag=C9E94_RS11875;product=hydrogenase 1 small subunit;protein_id=WP_001058312.1;transl_table=11
NZ_PYJR01000088.1	RefSeq	gene	2544	4337	.	+	.	ID=gene-C9E94_RS11880;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=C9E94_RS11880;old_locus_tag=C9E94_12150
NZ_PYJR01000088.1	Protein Homology	CDS	2544	4337	.	+	0	ID=cds-WP_000070982.1;Parent=gene-C9E94_RS11880;Dbxref=GenBank:WP_000070982.1;Name=WP_000070982.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460743.1;locus_tag=C9E94_RS11880;product=Ni/Fe-hydrogenase large subunit;protein_id=WP_000070982.1;transl_table=11
NZ_PYJR01000088.1	RefSeq	gene	4356	5150	.	+	.	ID=gene-C9E94_RS11885;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=C9E94_RS11885;old_locus_tag=C9E94_12155
NZ_PYJR01000088.1	Protein Homology	CDS	4356	5150	.	+	0	ID=cds-WP_233778155.1;Parent=gene-C9E94_RS11885;Dbxref=GenBank:WP_233778155.1;Name=WP_233778155.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460744.1;locus_tag=C9E94_RS11885;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_233778155.1;transl_table=11
NZ_PYJR01000088.1	RefSeq	gene	5147	5743	.	+	.	ID=gene-C9E94_RS11890;Name=hyaD;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;locus_tag=C9E94_RS11890;old_locus_tag=C9E94_12160
NZ_PYJR01000088.1	Protein Homology	CDS	5147	5743	.	+	0	ID=cds-WP_000993801.1;Parent=gene-C9E94_RS11890;Dbxref=GenBank:WP_000993801.1;Name=WP_000993801.1;gbkey=CDS;gene=hyaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460745.1;locus_tag=C9E94_RS11890;product=hydrogenase 1 maturation protease;protein_id=WP_000993801.1;transl_table=11
NZ_PYJR01000088.1	RefSeq	gene	5733	6137	.	+	.	ID=gene-C9E94_RS11895;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=C9E94_RS11895;old_locus_tag=C9E94_12165
NZ_PYJR01000088.1	Protein Homology	CDS	5733	6137	.	+	0	ID=cds-WP_001262580.1;Parent=gene-C9E94_RS11895;Dbxref=GenBank:WP_001262580.1;Name=WP_001262580.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460746.1;locus_tag=C9E94_RS11895;product=hydrogenase-1 operon protein HyaE;protein_id=WP_001262580.1;transl_table=11
NZ_PYJR01000088.1	RefSeq	gene	6134	6982	.	+	.	ID=gene-C9E94_RS11900;Name=C9E94_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11900;old_locus_tag=C9E94_12170
NZ_PYJR01000088.1	Protein Homology	CDS	6134	6982	.	+	0	ID=cds-WP_000063377.1;Parent=gene-C9E94_RS11900;Dbxref=GenBank:WP_000063377.1;Name=WP_000063377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460747.1;locus_tag=C9E94_RS11900;product=hydrogenase expression/formation protein;protein_id=WP_000063377.1;transl_table=11
NZ_PYJR01000088.1	RefSeq	gene	7057	8601	.	+	.	ID=gene-C9E94_RS11905;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=C9E94_RS11905;old_locus_tag=C9E94_12175
NZ_PYJR01000088.1	Protein Homology	CDS	7057	8601	.	+	0	ID=cds-WP_000263613.1;Parent=gene-C9E94_RS11905;Dbxref=GenBank:WP_000263613.1;Name=WP_000263613.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460748.1;locus_tag=C9E94_RS11905;product=cytochrome bd-II oxidase subunit 1;protein_id=WP_000263613.1;transl_table=11
NZ_PYJR01000088.1	RefSeq	gene	8613	9749	.	+	.	ID=gene-C9E94_RS11910;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=C9E94_RS11910;old_locus_tag=C9E94_12180
NZ_PYJR01000088.1	Protein Homology	CDS	8613	9749	.	+	0	ID=cds-WP_135401040.1;Parent=gene-C9E94_RS11910;Dbxref=GenBank:WP_135401040.1;Name=WP_135401040.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460749.1;locus_tag=C9E94_RS11910;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_135401040.1;transl_table=11
NZ_PYJR01000088.1	RefSeq	gene	9762	9851	.	+	.	ID=gene-C9E94_RS11915;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=C9E94_RS11915;old_locus_tag=C9E94_12185
NZ_PYJR01000088.1	Protein Homology	CDS	9762	9851	.	+	0	ID=cds-WP_000270301.1;Parent=gene-C9E94_RS11915;Dbxref=GenBank:WP_000270301.1;Name=WP_000270301.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460750.1;locus_tag=C9E94_RS11915;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WP_000270301.1;transl_table=11
NZ_PYJR01000088.1	RefSeq	gene	10246	11520	.	+	.	ID=gene-C9E94_RS11920;Name=C9E94_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11920;old_locus_tag=C9E94_12190
NZ_PYJR01000088.1	Protein Homology	CDS	10246	11520	.	+	0	ID=cds-WP_135401041.1;Parent=gene-C9E94_RS11920;Dbxref=GenBank:WP_135401041.1;Name=WP_135401041.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=C9E94_RS11920;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_135401041.1;transl_table=11
NZ_PYJR01000088.1	RefSeq	gene	11734	13446	.	+	.	ID=gene-C9E94_RS11925;Name=C9E94_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11925;old_locus_tag=C9E94_12195
NZ_PYJR01000088.1	Protein Homology	CDS	11734	13446	.	+	0	ID=cds-WP_135401042.1;Parent=gene-C9E94_RS11925;Dbxref=GenBank:WP_135401042.1;Name=WP_135401042.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=C9E94_RS11925;product=alpha%2Calpha-trehalase;protein_id=WP_135401042.1;transl_table=11
NZ_PYJR01000088.1	RefSeq	gene	13509	13763	.	-	.	ID=gene-C9E94_RS11930;Name=C9E94_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11930;old_locus_tag=C9E94_12200
NZ_PYJR01000088.1	Protein Homology	CDS	13509	13763	.	-	0	ID=cds-WP_000511323.1;Parent=gene-C9E94_RS11930;Dbxref=GenBank:WP_000511323.1;Name=WP_000511323.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460753.1;locus_tag=C9E94_RS11930;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000511323.1;transl_table=11
NZ_PYJR01000088.1	RefSeq	gene	13932	14666	.	+	.	ID=gene-C9E94_RS11935;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=C9E94_RS11935;old_locus_tag=C9E94_12205
NZ_PYJR01000088.1	Protein Homology	CDS	13932	14666	.	+	0	ID=cds-WP_020438150.1;Parent=gene-C9E94_RS11935;Dbxref=GenBank:WP_020438150.1;Name=WP_020438150.1;Ontology_term=GO:0071945,GO:0035438;gbkey=CDS;gene=ycgR;go_function=cyclic-di-GMP binding|0035438||IEA;go_process=regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed|0071945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=C9E94_RS11935;product=flagellar brake protein YcgR;protein_id=WP_020438150.1;transl_table=11
NZ_PYJR01000088.1	RefSeq	gene	14680	15291	.	-	.	ID=gene-C9E94_RS11940;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=C9E94_RS11940;old_locus_tag=C9E94_12210
NZ_PYJR01000088.1	Protein Homology	CDS	14680	15291	.	-	0	ID=cds-WP_000776974.1;Parent=gene-C9E94_RS11940;Dbxref=GenBank:WP_000776974.1;Name=WP_000776974.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460755.1;locus_tag=C9E94_RS11940;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_000776974.1;transl_table=11
NZ_PYJR01000088.1	RefSeq	gene	15461	15702	.	+	.	ID=gene-C9E94_RS11945;Name=C9E94_RS11945;end_range=15702,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11945;old_locus_tag=C9E94_12215;partial=true
NZ_PYJR01000088.1	Protein Homology	CDS	15461	15702	.	+	0	ID=cds-WP_217810253.1;Parent=gene-C9E94_RS11945;Dbxref=GenBank:WP_217810253.1;Name=WP_217810253.1;end_range=15702,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460756.1;locus_tag=C9E94_RS11945;partial=true;product=LD-carboxypeptidase;protein_id=WP_217810253.1;transl_table=11
##sequence-region NZ_PYJR01000127.1 1 14812
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000127.1	RefSeq	region	1	14812	.	+	.	ID=NZ_PYJR01000127.1:1..14812;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000127.1	RefSeq	gene	100	1029	.	+	.	ID=gene-C9E94_RS19155;Name=C9E94_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19155;old_locus_tag=C9E94_19630
NZ_PYJR01000127.1	Protein Homology	CDS	100	1029	.	+	0	ID=cds-WP_135401185.1;Parent=gene-C9E94_RS19155;Dbxref=GenBank:WP_135401185.1;Name=WP_135401185.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037408.6;locus_tag=C9E94_RS19155;product=hypothetical protein;protein_id=WP_135401185.1;transl_table=11
NZ_PYJR01000127.1	RefSeq	gene	1035	2120	.	-	.	ID=gene-C9E94_RS19160;Name=C9E94_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19160;old_locus_tag=C9E94_19635
NZ_PYJR01000127.1	Protein Homology	CDS	1035	2120	.	-	0	ID=cds-WP_063809691.1;Parent=gene-C9E94_RS19160;Dbxref=GenBank:WP_063809691.1;Name=WP_063809691.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017885.6;locus_tag=C9E94_RS19160;product=ImmA/IrrE family metallo-endopeptidase;protein_id=WP_063809691.1;transl_table=11
NZ_PYJR01000127.1	RefSeq	pseudogene	3014	3319	.	+	.	ID=gene-C9E94_RS19165;Name=C9E94_RS19165;end_range=3319,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS19165;old_locus_tag=C9E94_19645;partial=true;pseudo=true
NZ_PYJR01000127.1	Protein Homology	CDS	3014	3319	.	+	0	ID=cds-C9E94_RS19165;Parent=gene-C9E94_RS19165;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;end_range=3319,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=C9E94_RS19165;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11
NZ_PYJR01000127.1	RefSeq	gene	3741	3816	.	+	.	ID=gene-C9E94_RS19170;Name=C9E94_RS19170;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS19170;old_locus_tag=C9E94_19650
NZ_PYJR01000127.1	tRNAscan-SE	tRNA	3741	3816	.	+	.	ID=rna-C9E94_RS19170;Parent=gene-C9E94_RS19170;anticodon=(pos:3774..3776);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS19170;product=tRNA-Asn
NZ_PYJR01000127.1	tRNAscan-SE	exon	3741	3816	.	+	.	ID=exon-C9E94_RS19170-1;Parent=rna-C9E94_RS19170;anticodon=(pos:3774..3776);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS19170;product=tRNA-Asn
NZ_PYJR01000127.1	RefSeq	gene	3979	4452	.	+	.	ID=gene-C9E94_RS19175;Name=C9E94_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19175;old_locus_tag=C9E94_19655
NZ_PYJR01000127.1	Protein Homology	CDS	3979	4452	.	+	0	ID=cds-WP_135401186.1;Parent=gene-C9E94_RS19175;Dbxref=GenBank:WP_135401186.1;Name=WP_135401186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460952.1;locus_tag=C9E94_RS19175;product=peptidase;protein_id=WP_135401186.1;transl_table=11
NZ_PYJR01000127.1	RefSeq	pseudogene	4926	5393	.	+	.	ID=gene-C9E94_RS19180;Name=C9E94_RS19180;end_range=5393,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS19180;old_locus_tag=C9E94_19660;partial=true;pseudo=true
NZ_PYJR01000127.1	Protein Homology	CDS	4926	5393	.	+	0	ID=cds-C9E94_RS19180;Parent=gene-C9E94_RS19180;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=5393,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517119.1;locus_tag=C9E94_RS19180;partial=true;product=phage integrase N-terminal domain-containing protein;pseudo=true;transl_table=11
NZ_PYJR01000127.1	RefSeq	pseudogene	5479	5757	.	+	.	ID=gene-C9E94_RS19185;Name=C9E94_RS19185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS19185;old_locus_tag=C9E94_19665;partial=true;pseudo=true;start_range=.,5479
NZ_PYJR01000127.1	Protein Homology	CDS	5479	5757	.	+	0	ID=cds-C9E94_RS19185;Parent=gene-C9E94_RS19185;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950586.1;locus_tag=C9E94_RS19185;partial=true;product=transposase;pseudo=true;start_range=.,5479;transl_table=11
NZ_PYJR01000127.1	RefSeq	gene	6441	8135	.	+	.	ID=gene-C9E94_RS19190;Name=C9E94_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19190;old_locus_tag=C9E94_19670
NZ_PYJR01000127.1	Protein Homology	CDS	6441	8135	.	+	0	ID=cds-WP_077904895.1;Parent=gene-C9E94_RS19190;Dbxref=GenBank:WP_077904895.1;Name=WP_077904895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460954.1;locus_tag=C9E94_RS19190;product=SEL1-like repeat protein;protein_id=WP_077904895.1;transl_table=11
NZ_PYJR01000127.1	RefSeq	gene	8192	9922	.	+	.	ID=gene-C9E94_RS19195;Name=C9E94_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19195;old_locus_tag=C9E94_19675
NZ_PYJR01000127.1	Protein Homology	CDS	8192	9922	.	+	0	ID=cds-WP_135401187.1;Parent=gene-C9E94_RS19195;Dbxref=GenBank:WP_135401187.1;Name=WP_135401187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460955.1;locus_tag=C9E94_RS19195;product=hypothetical protein;protein_id=WP_135401187.1;transl_table=11
NZ_PYJR01000127.1	RefSeq	pseudogene	9980	10084	.	-	.	ID=gene-C9E94_RS19200;Name=C9E94_RS19200;end_range=10084,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS19200;old_locus_tag=C9E94_19680;partial=true;pseudo=true
NZ_PYJR01000127.1	Protein Homology	CDS	9980	10084	.	-	0	ID=cds-C9E94_RS19200;Parent=gene-C9E94_RS19200;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=10084,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=C9E94_RS19200;partial=true;product=DUF520 family protein;pseudo=true;transl_table=11
NZ_PYJR01000127.1	RefSeq	gene	10132	10305	.	+	.	ID=gene-C9E94_RS23395;Name=C9E94_RS23395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23395
NZ_PYJR01000127.1	Protein Homology	CDS	10132	10305	.	+	0	ID=cds-WP_000957536.1;Parent=gene-C9E94_RS23395;Dbxref=GenBank:WP_000957536.1;Name=WP_000957536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000957538.1;locus_tag=C9E94_RS23395;product=hypothetical protein;protein_id=WP_000957536.1;transl_table=11
NZ_PYJR01000127.1	RefSeq	gene	10826	12280	.	-	.	ID=gene-C9E94_RS19210;Name=C9E94_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19210;old_locus_tag=C9E94_19690
NZ_PYJR01000127.1	Protein Homology	CDS	10826	12280	.	-	0	ID=cds-WP_000428191.1;Parent=gene-C9E94_RS19210;Dbxref=GenBank:WP_000428191.1;Name=WP_000428191.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460956.1;locus_tag=C9E94_RS19210;product=AMP nucleosidase;protein_id=WP_000428191.1;transl_table=11
NZ_PYJR01000127.1	RefSeq	gene	12933	13008	.	-	.	ID=gene-C9E94_RS19220;Name=C9E94_RS19220;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS19220;old_locus_tag=C9E94_19700
NZ_PYJR01000127.1	tRNAscan-SE	tRNA	12933	13008	.	-	.	ID=rna-C9E94_RS19220;Parent=gene-C9E94_RS19220;anticodon=(pos:complement(12973..12975));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS19220;product=tRNA-Asn
NZ_PYJR01000127.1	tRNAscan-SE	exon	12933	13008	.	-	.	ID=exon-C9E94_RS19220-1;Parent=rna-C9E94_RS19220;anticodon=(pos:complement(12973..12975));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS19220;product=tRNA-Asn
NZ_PYJR01000127.1	RefSeq	gene	13149	14606	.	-	.	ID=gene-C9E94_RS19225;Name=C9E94_RS19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19225;old_locus_tag=C9E94_19705
NZ_PYJR01000127.1	Protein Homology	CDS	13149	14606	.	-	0	ID=cds-WP_001669456.1;Parent=gene-C9E94_RS19225;Dbxref=GenBank:WP_001669456.1;Name=WP_001669456.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460959.1;locus_tag=C9E94_RS19225;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=WP_001669456.1;transl_table=11
##sequence-region NZ_PYJR01000056.1 1 14157
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000056.1	RefSeq	region	1	14157	.	+	.	ID=NZ_PYJR01000056.1:1..14157;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000056.1	RefSeq	pseudogene	1	115	.	+	.	ID=gene-C9E94_RS07385;Name=sciR;gbkey=Gene;gene=sciR;gene_biotype=pseudogene;locus_tag=C9E94_RS07385;old_locus_tag=C9E94_07560;partial=true;pseudo=true;start_range=.,1
NZ_PYJR01000056.1	Protein Homology	CDS	1	115	.	+	1	ID=cds-C9E94_RS07385;Parent=gene-C9E94_RS07385;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=sciR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459282.1;locus_tag=C9E94_RS07385;partial=true;product=Shiga-like toxin A subunit SciR;pseudo=true;start_range=.,1;transl_table=11
NZ_PYJR01000056.1	RefSeq	gene	149	4018	.	+	.	ID=gene-C9E94_RS07390;Name=icmF;gbkey=Gene;gene=icmF;gene_biotype=protein_coding;locus_tag=C9E94_RS07390;old_locus_tag=C9E94_07565
NZ_PYJR01000056.1	Protein Homology	CDS	149	4018	.	+	0	ID=cds-WP_135400905.1;Parent=gene-C9E94_RS07390;Dbxref=GenBank:WP_135400905.1;Name=WP_135400905.1;gbkey=CDS;gene=icmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459283.1;locus_tag=C9E94_RS07390;product=Type VI secretion protein IcmF;protein_id=WP_135400905.1;transl_table=11
NZ_PYJR01000056.1	RefSeq	gene	4018	4806	.	+	.	ID=gene-C9E94_RS07395;Name=C9E94_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07395;old_locus_tag=C9E94_07570
NZ_PYJR01000056.1	Protein Homology	CDS	4018	4806	.	+	0	ID=cds-WP_135400906.1;Parent=gene-C9E94_RS07395;Dbxref=GenBank:WP_135400906.1;Name=WP_135400906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459284.1;locus_tag=C9E94_RS07395;product=TagF domain-containing protein;protein_id=WP_135400906.1;transl_table=11
NZ_PYJR01000056.1	RefSeq	gene	4803	5219	.	+	.	ID=gene-C9E94_RS07400;Name=C9E94_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07400;old_locus_tag=C9E94_07575
NZ_PYJR01000056.1	Protein Homology	CDS	4803	5219	.	+	0	ID=cds-WP_001596567.1;Parent=gene-C9E94_RS07400;Dbxref=GenBank:WP_001596567.1;Name=WP_001596567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459285.1;locus_tag=C9E94_RS07400;product=DUF2195 family protein;protein_id=WP_001596567.1;transl_table=11
NZ_PYJR01000056.1	RefSeq	gene	5243	5764	.	+	.	ID=gene-C9E94_RS07405;Name=C9E94_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07405;old_locus_tag=C9E94_07580
NZ_PYJR01000056.1	Protein Homology	CDS	5243	5764	.	+	0	ID=cds-WP_000968384.1;Parent=gene-C9E94_RS07405;Dbxref=GenBank:WP_000968384.1;Name=WP_000968384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459286.1;locus_tag=C9E94_RS07405;product=DUF2778 domain-containing protein;protein_id=WP_000968384.1;transl_table=11
NZ_PYJR01000056.1	RefSeq	gene	6160	8346	.	+	.	ID=gene-C9E94_RS07410;Name=C9E94_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07410;old_locus_tag=C9E94_07590
NZ_PYJR01000056.1	Protein Homology	CDS	6160	8346	.	+	0	ID=cds-WP_135400907.1;Parent=gene-C9E94_RS07410;Dbxref=GenBank:WP_135400907.1;Name=WP_135400907.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459287.1;locus_tag=C9E94_RS07410;product=type VI secretion system Vgr family protein;protein_id=WP_135400907.1;transl_table=11
NZ_PYJR01000056.1	RefSeq	gene	8370	8816	.	+	.	ID=gene-C9E94_RS07415;Name=C9E94_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07415;old_locus_tag=C9E94_07595
NZ_PYJR01000056.1	Protein Homology	CDS	8370	8816	.	+	0	ID=cds-WP_058107933.1;Parent=gene-C9E94_RS07415;Dbxref=GenBank:WP_058107933.1;Name=WP_058107933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459288.1;locus_tag=C9E94_RS07415;product=DcrB-related protein;protein_id=WP_058107933.1;transl_table=11
NZ_PYJR01000056.1	RefSeq	gene	8835	12932	.	+	.	ID=gene-C9E94_RS07420;Name=C9E94_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07420;old_locus_tag=C9E94_07600
NZ_PYJR01000056.1	Protein Homology	CDS	8835	12932	.	+	0	ID=cds-WP_061378365.1;Parent=gene-C9E94_RS07420;Dbxref=GenBank:WP_061378365.1;Name=WP_061378365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=C9E94_RS07420;product=RHS repeat-associated core domain-containing protein;protein_id=WP_061378365.1;transl_table=11
NZ_PYJR01000056.1	RefSeq	gene	12926	13339	.	+	.	ID=gene-C9E94_RS07425;Name=C9E94_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07425;old_locus_tag=C9E94_07605
NZ_PYJR01000056.1	GeneMarkS-2+	CDS	12926	13339	.	+	0	ID=cds-WP_255123229.1;Parent=gene-C9E94_RS07425;Dbxref=GenBank:WP_255123229.1;Name=WP_255123229.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS07425;product=hypothetical protein;protein_id=WP_255123229.1;transl_table=11
NZ_PYJR01000056.1	RefSeq	gene	13493	13657	.	+	.	ID=gene-C9E94_RS23350;Name=C9E94_RS23350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23350
NZ_PYJR01000056.1	GeneMarkS-2+	CDS	13493	13657	.	+	0	ID=cds-WP_162264803.1;Parent=gene-C9E94_RS23350;Dbxref=GenBank:WP_162264803.1;Name=WP_162264803.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS23350;product=hypothetical protein;protein_id=WP_162264803.1;transl_table=11
NZ_PYJR01000056.1	RefSeq	gene	13723	14154	.	+	.	ID=gene-C9E94_RS07430;Name=C9E94_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07430;old_locus_tag=C9E94_07610
NZ_PYJR01000056.1	Protein Homology	CDS	13723	14154	.	+	0	ID=cds-WP_072276023.1;Parent=gene-C9E94_RS07430;Dbxref=GenBank:WP_072276023.1;Name=WP_072276023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000711193.1;locus_tag=C9E94_RS07430;product=hypothetical protein;protein_id=WP_072276023.1;transl_table=11
##sequence-region NZ_PYJR01000096.1 1 13647
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000096.1	RefSeq	region	1	13647	.	+	.	ID=NZ_PYJR01000096.1:1..13647;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000096.1	RefSeq	gene	274	978	.	-	.	ID=gene-C9E94_RS13300;Name=C9E94_RS13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13300;old_locus_tag=C9E94_13625
NZ_PYJR01000096.1	Protein Homology	CDS	274	978	.	-	0	ID=cds-WP_000637072.1;Parent=gene-C9E94_RS13300;Dbxref=GenBank:WP_000637072.1;Name=WP_000637072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462542.1;locus_tag=C9E94_RS13300;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000637072.1;transl_table=11
NZ_PYJR01000096.1	RefSeq	gene	1135	1716	.	+	.	ID=gene-C9E94_RS13305;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=C9E94_RS13305;old_locus_tag=C9E94_13630
NZ_PYJR01000096.1	Protein Homology	CDS	1135	1716	.	+	0	ID=cds-WP_001188405.1;Parent=gene-C9E94_RS13305;Dbxref=GenBank:WP_001188405.1;Name=WP_001188405.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462543.1;locus_tag=C9E94_RS13305;product=DNA-3-methyladenine glycosylase I;protein_id=WP_001188405.1;transl_table=11
NZ_PYJR01000096.1	RefSeq	gene	1694	2134	.	+	.	ID=gene-C9E94_RS13310;Name=C9E94_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13310;old_locus_tag=C9E94_13635
NZ_PYJR01000096.1	Protein Homology	CDS	1694	2134	.	+	0	ID=cds-WP_000619902.1;Parent=gene-C9E94_RS13310;Dbxref=GenBank:WP_000619902.1;Name=WP_000619902.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462544.1;locus_tag=C9E94_RS13310;product=N-acetyltransferase;protein_id=WP_000619902.1;transl_table=11
NZ_PYJR01000096.1	RefSeq	gene	2103	4436	.	-	.	ID=gene-C9E94_RS13315;Name=C9E94_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13315;old_locus_tag=C9E94_13640
NZ_PYJR01000096.1	Protein Homology	CDS	2103	4436	.	-	0	ID=cds-WP_135401075.1;Parent=gene-C9E94_RS13315;Dbxref=GenBank:WP_135401075.1;Name=WP_135401075.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462545.1;locus_tag=C9E94_RS13315;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_135401075.1;transl_table=11
NZ_PYJR01000096.1	RefSeq	gene	4589	5251	.	+	.	ID=gene-C9E94_RS13320;Name=C9E94_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13320;old_locus_tag=C9E94_13645
NZ_PYJR01000096.1	Protein Homology	CDS	4589	5251	.	+	0	ID=cds-WP_000747548.1;Parent=gene-C9E94_RS13320;Dbxref=GenBank:WP_000747548.1;Name=WP_000747548.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462546.1;locus_tag=C9E94_RS13320;product=OmpA family lipoprotein;protein_id=WP_000747548.1;transl_table=11
NZ_PYJR01000096.1	RefSeq	gene	5470	6444	.	+	.	ID=gene-C9E94_RS13325;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=C9E94_RS13325;old_locus_tag=C9E94_13650
NZ_PYJR01000096.1	Protein Homology	CDS	5470	6444	.	+	0	ID=cds-WP_135401076.1;Parent=gene-C9E94_RS13325;Dbxref=GenBank:WP_135401076.1;Name=WP_135401076.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462547.1;locus_tag=C9E94_RS13325;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_135401076.1;transl_table=11
NZ_PYJR01000096.1	RefSeq	gene	6494	7204	.	-	.	ID=gene-C9E94_RS13330;Name=C9E94_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13330;old_locus_tag=C9E94_13655
NZ_PYJR01000096.1	Protein Homology	CDS	6494	7204	.	-	0	ID=cds-WP_000190524.1;Parent=gene-C9E94_RS13330;Dbxref=GenBank:WP_000190524.1;Name=WP_000190524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462548.1;locus_tag=C9E94_RS13330;product=DUF3053 domain-containing protein;protein_id=WP_000190524.1;transl_table=11
NZ_PYJR01000096.1	RefSeq	gene	7643	7933	.	+	.	ID=gene-C9E94_RS13335;Name=C9E94_RS13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13335;old_locus_tag=C9E94_13660
NZ_PYJR01000096.1	Protein Homology	CDS	7643	7933	.	+	0	ID=cds-WP_000455790.1;Parent=gene-C9E94_RS13335;Dbxref=GenBank:WP_000455790.1;Name=WP_000455790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462549.1;locus_tag=C9E94_RS13335;product=HTH-type transcriptional regulator;protein_id=WP_000455790.1;transl_table=11
NZ_PYJR01000096.1	RefSeq	gene	8221	8433	.	+	.	ID=gene-C9E94_RS13340;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=C9E94_RS13340;old_locus_tag=C9E94_13665
NZ_PYJR01000096.1	Protein Homology	CDS	8221	8433	.	+	0	ID=cds-WP_000014594.1;Parent=gene-C9E94_RS13340;Dbxref=GenBank:WP_000014594.1;Name=WP_000014594.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=C9E94_RS13340;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000014594.1;transl_table=11
NZ_PYJR01000096.1	RefSeq	gene	8608	9147	.	+	.	ID=gene-C9E94_RS13345;Name=cueP;gbkey=Gene;gene=cueP;gene_biotype=protein_coding;locus_tag=C9E94_RS13345;old_locus_tag=C9E94_13670
NZ_PYJR01000096.1	Protein Homology	CDS	8608	9147	.	+	0	ID=cds-WP_135401077.1;Parent=gene-C9E94_RS13345;Dbxref=GenBank:WP_135401077.1;Name=WP_135401077.1;gbkey=CDS;gene=cueP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462551.1;locus_tag=C9E94_RS13345;product=copper-binding periplasmic metallochaperone CueP;protein_id=WP_135401077.1;transl_table=11
NZ_PYJR01000096.1	RefSeq	gene	9518	10003	.	-	.	ID=gene-C9E94_RS13350;Name=C9E94_RS13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13350;old_locus_tag=C9E94_13675
NZ_PYJR01000096.1	Protein Homology	CDS	9518	10003	.	-	0	ID=cds-WP_080204125.1;Parent=gene-C9E94_RS13350;Dbxref=GenBank:WP_080204125.1;Name=WP_080204125.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462552.1;locus_tag=C9E94_RS13350;product=GNAT family N-acetyltransferase;protein_id=WP_080204125.1;transl_table=11
NZ_PYJR01000096.1	RefSeq	gene	9991	10278	.	-	.	ID=gene-C9E94_RS13355;Name=C9E94_RS13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13355;old_locus_tag=C9E94_13680
NZ_PYJR01000096.1	Protein Homology	CDS	9991	10278	.	-	0	ID=cds-WP_000965886.1;Parent=gene-C9E94_RS13355;Dbxref=GenBank:WP_000965886.1;Name=WP_000965886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462553.1;locus_tag=C9E94_RS13355;product=type II toxin-antitoxin system TacA family antitoxin;protein_id=WP_000965886.1;transl_table=11
NZ_PYJR01000096.1	RefSeq	pseudogene	10444	11050	.	-	.	ID=gene-C9E94_RS13360;Name=C9E94_RS13360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS13360;old_locus_tag=C9E94_13685;pseudo=true
NZ_PYJR01000096.1	Protein Homology	CDS	10444	11050	.	-	0	ID=cds-C9E94_RS13360;Parent=gene-C9E94_RS13360;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227035.1;locus_tag=C9E94_RS13360;product=cysteine hydrolase family protein;pseudo=true;transl_table=11
NZ_PYJR01000096.1	RefSeq	gene	11091	12293	.	-	.	ID=gene-C9E94_RS13365;Name=C9E94_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13365;old_locus_tag=C9E94_13690
NZ_PYJR01000096.1	Protein Homology	CDS	11091	12293	.	-	0	ID=cds-WP_135401079.1;Parent=gene-C9E94_RS13365;Dbxref=GenBank:WP_135401079.1;Name=WP_135401079.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628845.1;locus_tag=C9E94_RS13365;product=MFS transporter;protein_id=WP_135401079.1;transl_table=11
NZ_PYJR01000096.1	RefSeq	gene	12378	13028	.	+	.	ID=gene-C9E94_RS13370;Name=C9E94_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13370;old_locus_tag=C9E94_13695
NZ_PYJR01000096.1	Protein Homology	CDS	12378	13028	.	+	0	ID=cds-WP_023993641.1;Parent=gene-C9E94_RS13370;Dbxref=GenBank:WP_023993641.1;Name=WP_023993641.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247421.1;locus_tag=C9E94_RS13370;product=GntR family transcriptional regulator;protein_id=WP_023993641.1;transl_table=11
NZ_PYJR01000096.1	RefSeq	pseudogene	13147	13575	.	-	.	ID=gene-C9E94_RS23650;Name=C9E94_RS23650;end_range=13575,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23650;partial=true;pseudo=true
NZ_PYJR01000096.1	Protein Homology	CDS	13147	13575	.	-	0	ID=cds-C9E94_RS23650;Parent=gene-C9E94_RS23650;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677;end_range=13575,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=C9E94_RS23650;partial=true;product=transposase;pseudo=true;transl_table=11
##sequence-region NZ_PYJR01000094.1 1 13162
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000094.1	RefSeq	region	1	13162	.	+	.	ID=NZ_PYJR01000094.1:1..13162;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000094.1	RefSeq	gene	1	328	.	-	.	ID=gene-C9E94_RS12715;Name=sciR;gbkey=Gene;gene=sciR;gene_biotype=protein_coding;locus_tag=C9E94_RS12715;old_locus_tag=C9E94_13020;partial=true;start_range=.,1
NZ_PYJR01000094.1	Protein Homology	CDS	1	328	.	-	0	ID=cds-WP_077248253.1;Parent=gene-C9E94_RS12715;Dbxref=GenBank:WP_077248253.1;Name=WP_077248253.1;gbkey=CDS;gene=sciR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459282.1;locus_tag=C9E94_RS12715;partial=true;product=Shiga-like toxin A subunit SciR;protein_id=WP_077248253.1;start_range=.,1;transl_table=11
NZ_PYJR01000094.1	RefSeq	gene	531	1304	.	-	.	ID=gene-C9E94_RS12720;Name=C9E94_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12720;old_locus_tag=C9E94_13030
NZ_PYJR01000094.1	Protein Homology	CDS	531	1304	.	-	0	ID=cds-WP_135401059.1;Parent=gene-C9E94_RS12720;Dbxref=GenBank:WP_135401059.1;Name=WP_135401059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459281.1;locus_tag=C9E94_RS12720;product=Rap1a/Tai family immunity protein;protein_id=WP_135401059.1;transl_table=11
NZ_PYJR01000094.1	RefSeq	gene	1309	2613	.	-	.	ID=gene-C9E94_RS12725;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=C9E94_RS12725;old_locus_tag=C9E94_13035
NZ_PYJR01000094.1	Protein Homology	CDS	1309	2613	.	-	0	ID=cds-WP_071055428.1;Parent=gene-C9E94_RS12725;Dbxref=GenBank:WP_071055428.1;Name=WP_071055428.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssL;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459280.1;locus_tag=C9E94_RS12725;product=type VI secretion system protein TssL%2C long form;protein_id=WP_071055428.1;transl_table=11
NZ_PYJR01000094.1	RefSeq	gene	2610	3953	.	-	.	ID=gene-C9E94_RS12730;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=C9E94_RS12730;old_locus_tag=C9E94_13040
NZ_PYJR01000094.1	Protein Homology	CDS	2610	3953	.	-	0	ID=cds-WP_000118732.1;Parent=gene-C9E94_RS12730;Dbxref=GenBank:WP_000118732.1;Name=WP_000118732.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459279.1;locus_tag=C9E94_RS12730;product=type VI secretion system baseplate subunit TssK;protein_id=WP_000118732.1;transl_table=11
NZ_PYJR01000094.1	RefSeq	gene	3957	4493	.	-	.	ID=gene-C9E94_RS12735;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=C9E94_RS12735;old_locus_tag=C9E94_13045
NZ_PYJR01000094.1	Protein Homology	CDS	3957	4493	.	-	0	ID=cds-WP_080079499.1;Parent=gene-C9E94_RS12735;Dbxref=GenBank:WP_080079499.1;Name=WP_080079499.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=C9E94_RS12735;product=type VI secretion system lipoprotein TssJ;protein_id=WP_080079499.1;transl_table=11
NZ_PYJR01000094.1	RefSeq	gene	4560	5045	.	-	.	ID=gene-C9E94_RS12740;Name=C9E94_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12740;old_locus_tag=C9E94_13050
NZ_PYJR01000094.1	Protein Homology	CDS	4560	5045	.	-	0	ID=cds-WP_023228246.1;Parent=gene-C9E94_RS12740;Dbxref=GenBank:WP_023228246.1;Name=WP_023228246.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459274.1;locus_tag=C9E94_RS12740;product=Hcp family type VI secretion system effector;protein_id=WP_023228246.1;transl_table=11
NZ_PYJR01000094.1	RefSeq	gene	5188	5571	.	-	.	ID=gene-C9E94_RS12745;Name=C9E94_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12745;old_locus_tag=C9E94_13055
NZ_PYJR01000094.1	Protein Homology	CDS	5188	5571	.	-	0	ID=cds-WP_000379146.1;Parent=gene-C9E94_RS12745;Dbxref=GenBank:WP_000379146.1;Name=WP_000379146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459276.1;locus_tag=C9E94_RS12745;product=type VI secretion system amidase immunity protein Tai4;protein_id=WP_000379146.1;transl_table=11
NZ_PYJR01000094.1	RefSeq	gene	5556	6041	.	-	.	ID=gene-C9E94_RS12750;Name=C9E94_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12750;old_locus_tag=C9E94_13060
NZ_PYJR01000094.1	Protein Homology	CDS	5556	6041	.	-	0	ID=cds-WP_001081550.1;Parent=gene-C9E94_RS12750;Dbxref=GenBank:WP_001081550.1;Name=WP_001081550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459275.1;locus_tag=C9E94_RS12750;product=type VI secretion system amidase effector protein Tae4;protein_id=WP_001081550.1;transl_table=11
NZ_PYJR01000094.1	RefSeq	pseudogene	6084	6276	.	-	.	ID=gene-C9E94_RS23645;Name=C9E94_RS23645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23645;partial=true;pseudo=true;start_range=.,6084
NZ_PYJR01000094.1	Protein Homology	CDS	6084	6276	.	-	0	ID=cds-C9E94_RS23645;Parent=gene-C9E94_RS23645;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=C9E94_RS23645;partial=true;product=type VI secretion system lipoprotein TssJ;pseudo=true;start_range=.,6084;transl_table=11
NZ_PYJR01000094.1	RefSeq	gene	6344	6829	.	-	.	ID=gene-C9E94_RS12755;Name=C9E94_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12755;old_locus_tag=C9E94_13065
NZ_PYJR01000094.1	Protein Homology	CDS	6344	6829	.	-	0	ID=cds-WP_060759583.1;Parent=gene-C9E94_RS12755;Dbxref=GenBank:WP_060759583.1;Name=WP_060759583.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459274.1;locus_tag=C9E94_RS12755;product=Hcp family type VI secretion system effector;protein_id=WP_060759583.1;transl_table=11
NZ_PYJR01000094.1	RefSeq	gene	7066	7491	.	-	.	ID=gene-C9E94_RS12760;Name=C9E94_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12760;old_locus_tag=C9E94_13070
NZ_PYJR01000094.1	Protein Homology	CDS	7066	7491	.	-	0	ID=cds-WP_001171576.1;Parent=gene-C9E94_RS12760;Dbxref=GenBank:WP_001171576.1;Name=WP_001171576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001171576.1;locus_tag=C9E94_RS12760;product=STY0301 family protein;protein_id=WP_001171576.1;transl_table=11
NZ_PYJR01000094.1	RefSeq	gene	7463	7864	.	-	.	ID=gene-C9E94_RS12765;Name=C9E94_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12765;old_locus_tag=C9E94_13075
NZ_PYJR01000094.1	Protein Homology	CDS	7463	7864	.	-	0	ID=cds-WP_001147175.1;Parent=gene-C9E94_RS12765;Dbxref=GenBank:WP_001147175.1;Name=WP_001147175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001147173.1;locus_tag=C9E94_RS12765;product=BPSL0067 family protein;protein_id=WP_001147175.1;transl_table=11
NZ_PYJR01000094.1	RefSeq	gene	7917	9425	.	-	.	ID=gene-C9E94_RS12770;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=C9E94_RS12770;old_locus_tag=C9E94_13080
NZ_PYJR01000094.1	Protein Homology	CDS	7917	9425	.	-	0	ID=cds-WP_135401060.1;Parent=gene-C9E94_RS12770;Dbxref=GenBank:WP_135401060.1;Name=WP_135401060.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459271.1;locus_tag=C9E94_RS12770;product=type VI secretion system contractile sheath large subunit;protein_id=WP_135401060.1;transl_table=11
NZ_PYJR01000094.1	RefSeq	gene	9449	9991	.	-	.	ID=gene-C9E94_RS12775;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=C9E94_RS12775;old_locus_tag=C9E94_13085
NZ_PYJR01000094.1	Protein Homology	CDS	9449	9991	.	-	0	ID=cds-WP_000996818.1;Parent=gene-C9E94_RS12775;Dbxref=GenBank:WP_000996818.1;Name=WP_000996818.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459270.1;locus_tag=C9E94_RS12775;product=type VI secretion system contractile sheath small subunit;protein_id=WP_000996818.1;transl_table=11
NZ_PYJR01000094.1	RefSeq	gene	10055	10345	.	-	.	ID=gene-C9E94_RS12780;Name=C9E94_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12780;old_locus_tag=C9E94_13090
NZ_PYJR01000094.1	Protein Homology	CDS	10055	10345	.	-	0	ID=cds-WP_000175471.1;Parent=gene-C9E94_RS12780;Dbxref=GenBank:WP_000175471.1;Name=WP_000175471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175185.1;locus_tag=C9E94_RS12780;product=hypothetical protein;protein_id=WP_000175471.1;transl_table=11
NZ_PYJR01000094.1	RefSeq	gene	10431	13094	.	-	.	ID=gene-C9E94_RS12785;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=C9E94_RS12785;old_locus_tag=C9E94_13095
NZ_PYJR01000094.1	Protein Homology	CDS	10431	13094	.	-	0	ID=cds-WP_135401061.1;Parent=gene-C9E94_RS12785;Dbxref=GenBank:WP_135401061.1;Name=WP_135401061.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000449792.1;locus_tag=C9E94_RS12785;product=type VI secretion system ATPase TssH;protein_id=WP_135401061.1;transl_table=11
##sequence-region NZ_PYJR01000095.1 1 114558
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000095.1	RefSeq	region	1	114558	.	+	.	ID=NZ_PYJR01000095.1:1..114558;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000095.1	RefSeq	gene	149	1147	.	+	.	ID=gene-C9E94_RS12790;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=C9E94_RS12790;old_locus_tag=C9E94_13100
NZ_PYJR01000095.1	Protein Homology	CDS	149	1147	.	+	0	ID=cds-WP_001036938.1;Parent=gene-C9E94_RS12790;Dbxref=GenBank:WP_001036938.1;Name=WP_001036938.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461135.1;locus_tag=C9E94_RS12790;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_001036938.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	1281	2801	.	+	.	ID=gene-C9E94_RS12795;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=C9E94_RS12795;old_locus_tag=C9E94_13105
NZ_PYJR01000095.1	Protein Homology	CDS	1281	2801	.	+	0	ID=cds-WP_080183625.1;Parent=gene-C9E94_RS12795;Dbxref=GenBank:WP_080183625.1;Name=WP_080183625.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=C9E94_RS12795;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_080183625.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	2817	3827	.	+	.	ID=gene-C9E94_RS12800;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=C9E94_RS12800;old_locus_tag=C9E94_13110
NZ_PYJR01000095.1	Protein Homology	CDS	2817	3827	.	+	0	ID=cds-WP_001275101.1;Parent=gene-C9E94_RS12800;Dbxref=GenBank:WP_001275101.1;Name=WP_001275101.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=C9E94_RS12800;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_001275101.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	3902	5137	.	-	.	ID=gene-C9E94_RS12805;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=C9E94_RS12805;old_locus_tag=C9E94_13115
NZ_PYJR01000095.1	Protein Homology	CDS	3902	5137	.	-	0	ID=cds-WP_000956095.1;Parent=gene-C9E94_RS12805;Dbxref=GenBank:WP_000956095.1;Name=WP_000956095.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=C9E94_RS12805;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_000956095.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	pseudogene	5131	6371	.	-	.	ID=gene-C9E94_RS12810;Name=C9E94_RS12810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS12810;old_locus_tag=C9E94_13120;pseudo=true
NZ_PYJR01000095.1	Protein Homology	CDS	5131	6371	.	-	0	ID=cds-C9E94_RS12810;Parent=gene-C9E94_RS12810;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461131.1;locus_tag=C9E94_RS12810;product=NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	6576	6821	.	-	.	ID=gene-C9E94_RS12815;Name=C9E94_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12815;old_locus_tag=C9E94_13125
NZ_PYJR01000095.1	Protein Homology	CDS	6576	6821	.	-	0	ID=cds-WP_000605187.1;Parent=gene-C9E94_RS12815;Dbxref=GenBank:WP_000605187.1;Name=WP_000605187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461130.1;locus_tag=C9E94_RS12815;product=DUF2542 family protein;protein_id=WP_000605187.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	6818	7537	.	-	.	ID=gene-C9E94_RS12820;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=C9E94_RS12820;old_locus_tag=C9E94_13130
NZ_PYJR01000095.1	Protein Homology	CDS	6818	7537	.	-	0	ID=cds-WP_000920081.1;Parent=gene-C9E94_RS12820;Dbxref=GenBank:WP_000920081.1;Name=WP_000920081.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461129.1;locus_tag=C9E94_RS12820;product=outer membrane permeability protein SanA;protein_id=WP_000920081.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	7714	8598	.	-	.	ID=gene-C9E94_RS12825;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=C9E94_RS12825;old_locus_tag=C9E94_13135
NZ_PYJR01000095.1	Protein Homology	CDS	7714	8598	.	-	0	ID=cds-WP_000553526.1;Parent=gene-C9E94_RS12825;Dbxref=GenBank:WP_000553526.1;Name=WP_000553526.1;Ontology_term=GO:0008655,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461128.1;locus_tag=C9E94_RS12825;product=cytidine deaminase;protein_id=WP_000553526.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	8752	9447	.	-	.	ID=gene-C9E94_RS12830;Name=C9E94_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12830;old_locus_tag=C9E94_13140
NZ_PYJR01000095.1	Protein Homology	CDS	8752	9447	.	-	0	ID=cds-WP_000989296.1;Parent=gene-C9E94_RS12830;Dbxref=GenBank:WP_000989296.1;Name=WP_000989296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461127.1;locus_tag=C9E94_RS12830;product=CidB/LrgB family autolysis modulator;protein_id=WP_000989296.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	9444	9842	.	-	.	ID=gene-C9E94_RS12835;Name=C9E94_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12835;old_locus_tag=C9E94_13145
NZ_PYJR01000095.1	Protein Homology	CDS	9444	9842	.	-	0	ID=cds-WP_000045719.1;Parent=gene-C9E94_RS12835;Dbxref=GenBank:WP_000045719.1;Name=WP_000045719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461126.1;locus_tag=C9E94_RS12835;product=CidA/LrgA family protein;protein_id=WP_000045719.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	9974	10882	.	-	.	ID=gene-C9E94_RS12840;Name=C9E94_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12840;old_locus_tag=C9E94_13150
NZ_PYJR01000095.1	Protein Homology	CDS	9974	10882	.	-	0	ID=cds-WP_000024658.1;Parent=gene-C9E94_RS12840;Dbxref=GenBank:WP_000024658.1;Name=WP_000024658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461125.1;locus_tag=C9E94_RS12840;product=LysR substrate-binding domain-containing protein;protein_id=WP_000024658.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	11008	12366	.	+	.	ID=gene-C9E94_RS12845;Name=mhbT;gbkey=Gene;gene=mhbT;gene_biotype=protein_coding;locus_tag=C9E94_RS12845;old_locus_tag=C9E94_13155
NZ_PYJR01000095.1	Protein Homology	CDS	11008	12366	.	+	0	ID=cds-WP_000194215.1;Parent=gene-C9E94_RS12845;Dbxref=GenBank:WP_000194215.1;Name=WP_000194215.1;gbkey=CDS;gene=mhbT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461124.1;locus_tag=C9E94_RS12845;product=3-hydroxybenzoate transporter MhbT;protein_id=WP_000194215.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	12378	13415	.	+	.	ID=gene-C9E94_RS12850;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=C9E94_RS12850;old_locus_tag=C9E94_13160
NZ_PYJR01000095.1	Protein Homology	CDS	12378	13415	.	+	0	ID=cds-WP_001289857.1;Parent=gene-C9E94_RS12850;Dbxref=GenBank:WP_001289857.1;Name=WP_001289857.1;Ontology_term=GO:0047922;gbkey=CDS;gene=gtdA;go_function=gentisate 1%2C2-dioxygenase activity|0047922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461123.1;locus_tag=C9E94_RS12850;product=gentisate 1%2C2-dioxygenase;protein_id=WP_001289857.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	13431	14132	.	+	.	ID=gene-C9E94_RS12855;Name=C9E94_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12855;old_locus_tag=C9E94_13165
NZ_PYJR01000095.1	Protein Homology	CDS	13431	14132	.	+	0	ID=cds-WP_000170621.1;Parent=gene-C9E94_RS12855;Dbxref=GenBank:WP_000170621.1;Name=WP_000170621.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461122.1;locus_tag=C9E94_RS12855;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000170621.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	14141	14785	.	+	.	ID=gene-C9E94_RS12860;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=C9E94_RS12860;old_locus_tag=C9E94_13170
NZ_PYJR01000095.1	Protein Homology	CDS	14141	14785	.	+	0	ID=cds-WP_000781183.1;Parent=gene-C9E94_RS12860;Dbxref=GenBank:WP_000781183.1;Name=WP_000781183.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034,GO:0005737;gbkey=CDS;gene=maiA;go_component=cytoplasm|0005737||IEA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,L-tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=C9E94_RS12860;product=maleylacetoacetate isomerase;protein_id=WP_000781183.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	14800	15993	.	+	.	ID=gene-C9E94_RS12865;Name=C9E94_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12865;old_locus_tag=C9E94_13175
NZ_PYJR01000095.1	Protein Homology	CDS	14800	15993	.	+	0	ID=cds-WP_000150106.1;Parent=gene-C9E94_RS12865;Dbxref=GenBank:WP_000150106.1;Name=WP_000150106.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461120.1;locus_tag=C9E94_RS12865;product=3-hydroxybenzoate 6-monooxygenase;protein_id=WP_000150106.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	16102	17040	.	+	.	ID=gene-C9E94_RS12870;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=C9E94_RS12870;old_locus_tag=C9E94_13180
NZ_PYJR01000095.1	Protein Homology	CDS	16102	17040	.	+	0	ID=cds-WP_001264844.1;Parent=gene-C9E94_RS12870;Dbxref=GenBank:WP_001264844.1;Name=WP_001264844.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461119.1;locus_tag=C9E94_RS12870;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_001264844.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	17098	17181	.	-	.	ID=gene-C9E94_RS23805;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=C9E94_RS23805;old_locus_tag=C9E94_13185
NZ_PYJR01000095.1	Protein Homology	CDS	17098	17181	.	-	0	ID=cds-WP_000698460.1;Parent=gene-C9E94_RS23805;Dbxref=GenBank:WP_000698460.1;Name=WP_000698460.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=C9E94_RS23805;product=small membrane protein YohP;protein_id=WP_000698460.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	17503	18939	.	+	.	ID=gene-C9E94_RS12880;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=C9E94_RS12880;old_locus_tag=C9E94_13190
NZ_PYJR01000095.1	Protein Homology	CDS	17503	18939	.	+	0	ID=cds-WP_001081457.1;Parent=gene-C9E94_RS12880;Dbxref=GenBank:WP_001081457.1;Name=WP_001081457.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461117.1;locus_tag=C9E94_RS12880;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_001081457.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	19005	19766	.	+	.	ID=gene-C9E94_RS12885;Name=C9E94_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12885;old_locus_tag=C9E94_13195
NZ_PYJR01000095.1	Protein Homology	CDS	19005	19766	.	+	0	ID=cds-WP_000169616.1;Parent=gene-C9E94_RS12885;Dbxref=GenBank:WP_000169616.1;Name=WP_000169616.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461116.1;locus_tag=C9E94_RS12885;product=SDR family oxidoreductase;protein_id=WP_000169616.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	19815	20384	.	-	.	ID=gene-C9E94_RS12890;Name=C9E94_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12890;old_locus_tag=C9E94_13200
NZ_PYJR01000095.1	Protein Homology	CDS	19815	20384	.	-	0	ID=cds-WP_001523476.1;Parent=gene-C9E94_RS12890;Dbxref=GenBank:WP_001523476.1;Name=WP_001523476.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669449.1;locus_tag=C9E94_RS12890;product=DedA family protein;protein_id=WP_001523476.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	20543	21130	.	+	.	ID=gene-C9E94_RS12895;Name=C9E94_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12895;old_locus_tag=C9E94_13205
NZ_PYJR01000095.1	Protein Homology	CDS	20543	21130	.	+	0	ID=cds-WP_001017057.1;Parent=gene-C9E94_RS12895;Dbxref=GenBank:WP_001017057.1;Name=WP_001017057.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=C9E94_RS12895;product=Yip1 family protein;protein_id=WP_001017057.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	21296	22243	.	+	.	ID=gene-C9E94_RS12900;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=C9E94_RS12900;old_locus_tag=C9E94_13215
NZ_PYJR01000095.1	Protein Homology	CDS	21296	22243	.	+	0	ID=cds-WP_000911555.1;Parent=gene-C9E94_RS12900;Dbxref=GenBank:WP_000911555.1;Name=WP_000911555.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461113.1;locus_tag=C9E94_RS12900;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_000911555.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	22302	24032	.	-	.	ID=gene-C9E94_RS12905;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=C9E94_RS12905;old_locus_tag=C9E94_13220
NZ_PYJR01000095.1	Protein Homology	CDS	22302	24032	.	-	0	ID=cds-WP_000095234.1;Parent=gene-C9E94_RS12905;Dbxref=GenBank:WP_000095234.1;Name=WP_000095234.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461112.1;locus_tag=C9E94_RS12905;product=D-lactate dehydrogenase;protein_id=WP_000095234.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	24299	26596	.	+	.	ID=gene-C9E94_RS12910;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=C9E94_RS12910;old_locus_tag=C9E94_13225
NZ_PYJR01000095.1	Protein Homology	CDS	24299	26596	.	+	0	ID=cds-WP_080203168.1;Parent=gene-C9E94_RS12910;Dbxref=GenBank:WP_080203168.1;Name=WP_080203168.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461111.1;locus_tag=C9E94_RS12910;product=beta-glucosidase BglX;protein_id=WP_080203168.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	26777	27694	.	+	.	ID=gene-C9E94_RS12915;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=C9E94_RS12915;old_locus_tag=C9E94_13230
NZ_PYJR01000095.1	Protein Homology	CDS	26777	27694	.	+	0	ID=cds-WP_000155876.1;Parent=gene-C9E94_RS12915;Dbxref=GenBank:WP_000155876.1;Name=WP_000155876.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461110.1;locus_tag=C9E94_RS12915;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_000155876.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	27698	28867	.	+	.	ID=gene-C9E94_RS12920;Name=C9E94_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12920;old_locus_tag=C9E94_13235
NZ_PYJR01000095.1	Protein Homology	CDS	27698	28867	.	+	0	ID=cds-WP_094889184.1;Parent=gene-C9E94_RS12920;Dbxref=GenBank:WP_094889184.1;Name=WP_094889184.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461109.1;locus_tag=C9E94_RS12920;product=ABC transporter permease;protein_id=WP_094889184.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	28860	29807	.	+	.	ID=gene-C9E94_RS12925;Name=C9E94_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12925;old_locus_tag=C9E94_13240
NZ_PYJR01000095.1	Protein Homology	CDS	28860	29807	.	+	0	ID=cds-WP_000569168.1;Parent=gene-C9E94_RS12925;Dbxref=GenBank:WP_000569168.1;Name=WP_000569168.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461108.1;locus_tag=C9E94_RS12925;product=ABC transporter ATP-binding protein;protein_id=WP_000569168.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	29791	30522	.	+	.	ID=gene-C9E94_RS12930;Name=C9E94_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12930;old_locus_tag=C9E94_13245
NZ_PYJR01000095.1	Protein Homology	CDS	29791	30522	.	+	0	ID=cds-WP_000824854.1;Parent=gene-C9E94_RS12930;Dbxref=GenBank:WP_000824854.1;Name=WP_000824854.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461107.1;locus_tag=C9E94_RS12930;product=ABC transporter permease;protein_id=WP_000824854.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	30503	30610	.	-	.	ID=gene-C9E94_RS12935;Name=C9E94_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12935;old_locus_tag=C9E94_13250
NZ_PYJR01000095.1	Protein Homology	CDS	30503	30610	.	-	0	ID=cds-WP_001261696.1;Parent=gene-C9E94_RS12935;Dbxref=GenBank:WP_001261696.1;Name=WP_001261696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461106.1;locus_tag=C9E94_RS12935;product=protein YohO;protein_id=WP_001261696.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	30670	31401	.	-	.	ID=gene-C9E94_RS12940;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=C9E94_RS12940;old_locus_tag=C9E94_13255
NZ_PYJR01000095.1	Protein Homology	CDS	30670	31401	.	-	0	ID=cds-WP_001240418.1;Parent=gene-C9E94_RS12940;Dbxref=GenBank:WP_001240418.1;Name=WP_001240418.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461105.1;locus_tag=C9E94_RS12940;product=HTH-type transcriptional regulator MlrA;protein_id=WP_001240418.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	31624	33309	.	+	.	ID=gene-C9E94_RS12945;Name=C9E94_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12945;old_locus_tag=C9E94_13260
NZ_PYJR01000095.1	Protein Homology	CDS	31624	33309	.	+	0	ID=cds-WP_000272850.1;Parent=gene-C9E94_RS12945;Dbxref=GenBank:WP_000272850.1;Name=WP_000272850.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461104.1;locus_tag=C9E94_RS12945;product=sensor histidine kinase;protein_id=WP_000272850.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	33306	34025	.	+	.	ID=gene-C9E94_RS12950;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=C9E94_RS12950;old_locus_tag=C9E94_13265
NZ_PYJR01000095.1	Protein Homology	CDS	33306	34025	.	+	0	ID=cds-WP_000598637.1;Parent=gene-C9E94_RS12950;Dbxref=GenBank:WP_000598637.1;Name=WP_000598637.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461103.1;locus_tag=C9E94_RS12950;product=two-component system response regulator BtsR;protein_id=WP_000598637.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	34072	34539	.	+	.	ID=gene-C9E94_RS12955;Name=C9E94_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12955;old_locus_tag=C9E94_13270
NZ_PYJR01000095.1	Protein Homology	CDS	34072	34539	.	+	0	ID=cds-WP_000950413.1;Parent=gene-C9E94_RS12955;Dbxref=GenBank:WP_000950413.1;Name=WP_000950413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461102.1;locus_tag=C9E94_RS12955;product=DUF1456 family protein;protein_id=WP_000950413.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	34596	35126	.	-	.	ID=gene-C9E94_RS12960;Name=C9E94_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12960;old_locus_tag=C9E94_13275
NZ_PYJR01000095.1	Protein Homology	CDS	34596	35126	.	-	0	ID=cds-WP_001197951.1;Parent=gene-C9E94_RS12960;Dbxref=GenBank:WP_001197951.1;Name=WP_001197951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461101.1;locus_tag=C9E94_RS12960;product=YehR family lipoprotein;protein_id=WP_001197951.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	35298	35756	.	-	.	ID=gene-C9E94_RS12965;Name=C9E94_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12965;old_locus_tag=C9E94_13280
NZ_PYJR01000095.1	Protein Homology	CDS	35298	35756	.	-	0	ID=cds-WP_000703137.1;Parent=gene-C9E94_RS12965;Dbxref=GenBank:WP_000703137.1;Name=WP_000703137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461100.1;locus_tag=C9E94_RS12965;product=YehR family lipoprotein;protein_id=WP_000703137.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	35997	38030	.	-	.	ID=gene-C9E94_RS12970;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=C9E94_RS12970;old_locus_tag=C9E94_13285
NZ_PYJR01000095.1	Protein Homology	CDS	35997	38030	.	-	0	ID=cds-WP_000195331.1;Parent=gene-C9E94_RS12970;Dbxref=GenBank:WP_000195331.1;Name=WP_000195331.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461099.1;locus_tag=C9E94_RS12970;product=methionine--tRNA ligase;protein_id=WP_000195331.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	38195	39304	.	+	.	ID=gene-C9E94_RS12975;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=C9E94_RS12975;old_locus_tag=C9E94_13290
NZ_PYJR01000095.1	Protein Homology	CDS	38195	39304	.	+	0	ID=cds-WP_001005424.1;Parent=gene-C9E94_RS12975;Dbxref=GenBank:WP_001005424.1;Name=WP_001005424.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461098.1;locus_tag=C9E94_RS12975;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_001005424.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	39582	39863	.	+	.	ID=gene-C9E94_RS12980;Name=C9E94_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12980;old_locus_tag=C9E94_13295
NZ_PYJR01000095.1	Protein Homology	CDS	39582	39863	.	+	0	ID=cds-WP_000760404.1;Parent=gene-C9E94_RS12980;Dbxref=GenBank:WP_000760404.1;Name=WP_000760404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461097.1;locus_tag=C9E94_RS12980;product=YehE family protein;protein_id=WP_000760404.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	40142	40672	.	+	.	ID=gene-C9E94_RS12985;Name=stcA;gbkey=Gene;gene=stcA;gene_biotype=protein_coding;locus_tag=C9E94_RS12985;old_locus_tag=C9E94_13300
NZ_PYJR01000095.1	Protein Homology	CDS	40142	40672	.	+	0	ID=cds-WP_000830686.1;Parent=gene-C9E94_RS12985;Dbxref=GenBank:WP_000830686.1;Name=WP_000830686.1;gbkey=CDS;gene=stcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461096.1;locus_tag=C9E94_RS12985;product=Stc fimbria major subunit StcA;protein_id=WP_000830686.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	40728	41411	.	+	.	ID=gene-C9E94_RS12990;Name=stcB;gbkey=Gene;gene=stcB;gene_biotype=protein_coding;locus_tag=C9E94_RS12990;old_locus_tag=C9E94_13305
NZ_PYJR01000095.1	Protein Homology	CDS	40728	41411	.	+	0	ID=cds-WP_000698775.1;Parent=gene-C9E94_RS12990;Dbxref=GenBank:WP_000698775.1;Name=WP_000698775.1;gbkey=CDS;gene=stcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461095.1;locus_tag=C9E94_RS12990;product=fimbrial biogenesis chaperone StcB;protein_id=WP_000698775.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	41425	43914	.	+	.	ID=gene-C9E94_RS12995;Name=C9E94_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12995;old_locus_tag=C9E94_13310
NZ_PYJR01000095.1	Protein Homology	CDS	41425	43914	.	+	0	ID=cds-WP_135401062.1;Parent=gene-C9E94_RS12995;Dbxref=GenBank:WP_135401062.1;Name=WP_135401062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461094.1;locus_tag=C9E94_RS12995;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_135401062.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	43930	44937	.	+	.	ID=gene-C9E94_RS13000;Name=C9E94_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13000;old_locus_tag=C9E94_13315
NZ_PYJR01000095.1	Protein Homology	CDS	43930	44937	.	+	0	ID=cds-WP_000765280.1;Parent=gene-C9E94_RS13000;Dbxref=GenBank:WP_000765280.1;Name=WP_000765280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461093.1;locus_tag=C9E94_RS13000;product=putative fimbrial-like adhesin protein;protein_id=WP_000765280.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	45199	45513	.	-	.	ID=gene-C9E94_RS13005;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=C9E94_RS13005;old_locus_tag=C9E94_13320
NZ_PYJR01000095.1	Protein Homology	CDS	45199	45513	.	-	0	ID=cds-WP_000837534.1;Parent=gene-C9E94_RS13005;Dbxref=GenBank:WP_000837534.1;Name=WP_000837534.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461092.1;locus_tag=C9E94_RS13005;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WP_000837534.1;transl_table=11
NZ_PYJR01000095.1	cmsearch	riboswitch	45795	45891	.	+	.	ID=id-NZ_PYJR01000095.1:45795..45891;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PYJR01000095.1	RefSeq	gene	45923	46720	.	+	.	ID=gene-C9E94_RS13010;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=C9E94_RS13010;old_locus_tag=C9E94_13325
NZ_PYJR01000095.1	Protein Homology	CDS	45923	46720	.	+	0	ID=cds-WP_079798554.1;Parent=gene-C9E94_RS13010;Dbxref=GenBank:WP_079798554.1;Name=WP_079798554.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461091.1;locus_tag=C9E94_RS13010;product=hydroxyethylthiazole kinase;protein_id=WP_079798554.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	46707	47507	.	+	.	ID=gene-C9E94_RS13015;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=C9E94_RS13015;old_locus_tag=C9E94_13330
NZ_PYJR01000095.1	Protein Homology	CDS	46707	47507	.	+	0	ID=cds-WP_001188957.1;Parent=gene-C9E94_RS13015;Dbxref=GenBank:WP_001188957.1;Name=WP_001188957.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461090.1;locus_tag=C9E94_RS13015;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_001188957.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	47543	48289	.	+	.	ID=gene-C9E94_RS13020;Name=C9E94_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13020;old_locus_tag=C9E94_13335
NZ_PYJR01000095.1	Protein Homology	CDS	47543	48289	.	+	0	ID=cds-WP_135401063.1;Parent=gene-C9E94_RS13020;Dbxref=GenBank:WP_135401063.1;Name=WP_135401063.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461089.1;locus_tag=C9E94_RS13020;product=GntR family transcriptional regulator;protein_id=WP_135401063.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	48263	49228	.	-	.	ID=gene-C9E94_RS13025;Name=C9E94_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13025;old_locus_tag=C9E94_13340
NZ_PYJR01000095.1	Protein Homology	CDS	48263	49228	.	-	0	ID=cds-WP_001012652.1;Parent=gene-C9E94_RS13025;Dbxref=GenBank:WP_001012652.1;Name=WP_001012652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461088.1;locus_tag=C9E94_RS13025;product=PfkB family carbohydrate kinase;protein_id=WP_001012652.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	49225	50229	.	-	.	ID=gene-C9E94_RS13030;Name=C9E94_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13030;old_locus_tag=C9E94_13345
NZ_PYJR01000095.1	Protein Homology	CDS	49225	50229	.	-	0	ID=cds-WP_000642793.1;Parent=gene-C9E94_RS13030;Dbxref=GenBank:WP_000642793.1;Name=WP_000642793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461087.1;locus_tag=C9E94_RS13030;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000642793.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	50226	51497	.	-	.	ID=gene-C9E94_RS13035;Name=C9E94_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13035;old_locus_tag=C9E94_13350
NZ_PYJR01000095.1	Protein Homology	CDS	50226	51497	.	-	0	ID=cds-WP_000858688.1;Parent=gene-C9E94_RS13035;Dbxref=GenBank:WP_000858688.1;Name=WP_000858688.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461086.1;locus_tag=C9E94_RS13035;product=nucleoside permease;protein_id=WP_000858688.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	51751	52803	.	+	.	ID=gene-C9E94_RS13040;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=C9E94_RS13040;old_locus_tag=C9E94_13355
NZ_PYJR01000095.1	Protein Homology	CDS	51751	52803	.	+	0	ID=cds-WP_000129590.1;Parent=gene-C9E94_RS13040;Dbxref=GenBank:WP_000129590.1;Name=WP_000129590.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=C9E94_RS13040;product=class I fructose-bisphosphate aldolase;protein_id=WP_000129590.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	52856	53755	.	-	.	ID=gene-C9E94_RS13045;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=C9E94_RS13045;old_locus_tag=C9E94_13360
NZ_PYJR01000095.1	Protein Homology	CDS	52856	53755	.	-	0	ID=cds-WP_001273393.1;Parent=gene-C9E94_RS13045;Dbxref=GenBank:WP_001273393.1;Name=WP_001273393.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461084.1;locus_tag=C9E94_RS13045;product=lipid kinase YegS;protein_id=WP_001273393.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	54317	54652	.	+	.	ID=gene-C9E94_RS13050;Name=steD;gbkey=Gene;gene=steD;gene_biotype=protein_coding;locus_tag=C9E94_RS13050;old_locus_tag=C9E94_13365
NZ_PYJR01000095.1	Protein Homology	CDS	54317	54652	.	+	0	ID=cds-WP_001533113.1;Parent=gene-C9E94_RS13050;Dbxref=GenBank:WP_001533113.1;Name=WP_001533113.1;gbkey=CDS;gene=steD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461083.1;locus_tag=C9E94_RS13050;product=type III secretion system effector SteD;protein_id=WP_001533113.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	54774	55190	.	+	.	ID=gene-C9E94_RS13055;Name=C9E94_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13055;old_locus_tag=C9E94_13370
NZ_PYJR01000095.1	Protein Homology	CDS	54774	55190	.	+	0	ID=cds-WP_001540404.1;Parent=gene-C9E94_RS13055;Dbxref=GenBank:WP_001540404.1;Name=WP_001540404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461082.1;locus_tag=C9E94_RS13055;product=CesT family type III secretion system chaperone;protein_id=WP_001540404.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	55226	56272	.	-	.	ID=gene-C9E94_RS13060;Name=sseK2;gbkey=Gene;gene=sseK2;gene_biotype=protein_coding;locus_tag=C9E94_RS13060;old_locus_tag=C9E94_13375
NZ_PYJR01000095.1	Protein Homology	CDS	55226	56272	.	-	0	ID=cds-WP_023994319.1;Parent=gene-C9E94_RS13060;Dbxref=GenBank:WP_023994319.1;Name=WP_023994319.1;gbkey=CDS;gene=sseK2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461081.1;locus_tag=C9E94_RS13060;product=type III secretion system effector arginine glycosyltransferase SseK2;protein_id=WP_023994319.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	56723	58084	.	-	.	ID=gene-C9E94_RS13065;Name=trhP;gbkey=Gene;gene=trhP;gene_biotype=protein_coding;gene_synonym=yegQ;locus_tag=C9E94_RS13065;old_locus_tag=C9E94_13380
NZ_PYJR01000095.1	Protein Homology	CDS	56723	58084	.	-	0	ID=cds-WP_001517981.1;Parent=gene-C9E94_RS13065;Dbxref=GenBank:WP_001517981.1;Name=WP_001517981.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhP;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461080.1;locus_tag=C9E94_RS13065;product=prephenate-dependent tRNA uridine(34) hydroxylase TrhP;protein_id=WP_001517981.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	58200	60311	.	-	.	ID=gene-C9E94_RS13070;Name=C9E94_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13070;old_locus_tag=C9E94_13385
NZ_PYJR01000095.1	Protein Homology	CDS	58200	60311	.	-	0	ID=cds-WP_135401064.1;Parent=gene-C9E94_RS13070;Dbxref=GenBank:WP_135401064.1;Name=WP_135401064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=C9E94_RS13070;product=DUF4034 domain-containing protein;protein_id=WP_135401064.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	60322	61038	.	-	.	ID=gene-C9E94_RS13075;Name=C9E94_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13075;old_locus_tag=C9E94_13390
NZ_PYJR01000095.1	Protein Homology	CDS	60322	61038	.	-	0	ID=cds-WP_000498584.1;Parent=gene-C9E94_RS13075;Dbxref=GenBank:WP_000498584.1;Name=WP_000498584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461078.1;locus_tag=C9E94_RS13075;product=DUF1266 domain-containing protein;protein_id=WP_000498584.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	61038	62240	.	-	.	ID=gene-C9E94_RS13080;Name=C9E94_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13080;old_locus_tag=C9E94_13395
NZ_PYJR01000095.1	Protein Homology	CDS	61038	62240	.	-	0	ID=cds-WP_058108603.1;Parent=gene-C9E94_RS13080;Dbxref=GenBank:WP_058108603.1;Name=WP_058108603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141078.1;locus_tag=C9E94_RS13080;product=cytoplasmic protein;protein_id=WP_058108603.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	62509	63231	.	-	.	ID=gene-C9E94_RS13090;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=C9E94_RS13090;old_locus_tag=C9E94_13405
NZ_PYJR01000095.1	Protein Homology	CDS	62509	63231	.	-	0	ID=cds-WP_000137854.1;Parent=gene-C9E94_RS13090;Dbxref=GenBank:WP_000137854.1;Name=WP_000137854.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461076.1;locus_tag=C9E94_RS13090;product=two-component system response regulator BaeR;protein_id=WP_000137854.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	63228	64631	.	-	.	ID=gene-C9E94_RS13095;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=C9E94_RS13095;old_locus_tag=C9E94_13410
NZ_PYJR01000095.1	Protein Homology	CDS	63228	64631	.	-	0	ID=cds-WP_000870073.1;Parent=gene-C9E94_RS13095;Dbxref=GenBank:WP_000870073.1;Name=WP_000870073.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461075.1;locus_tag=C9E94_RS13095;product=two-component system sensor histidine kinase BaeS;protein_id=WP_000870073.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	64631	66043	.	-	.	ID=gene-C9E94_RS13100;Name=C9E94_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13100;old_locus_tag=C9E94_13415
NZ_PYJR01000095.1	Protein Homology	CDS	64631	66043	.	-	0	ID=cds-WP_023993382.1;Parent=gene-C9E94_RS13100;Dbxref=GenBank:WP_023993382.1;Name=WP_023993382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461074.1;locus_tag=C9E94_RS13100;product=MFS transporter;protein_id=WP_023993382.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	66040	69120	.	-	.	ID=gene-C9E94_RS13105;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=C9E94_RS13105;old_locus_tag=C9E94_13420
NZ_PYJR01000095.1	Protein Homology	CDS	66040	69120	.	-	0	ID=cds-WP_080203699.1;Parent=gene-C9E94_RS13105;Dbxref=GenBank:WP_080203699.1;Name=WP_080203699.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461073.1;locus_tag=C9E94_RS13105;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_080203699.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	69121	72243	.	-	.	ID=gene-C9E94_RS13110;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=C9E94_RS13110;old_locus_tag=C9E94_13425
NZ_PYJR01000095.1	Protein Homology	CDS	69121	72243	.	-	0	ID=cds-WP_080219697.1;Parent=gene-C9E94_RS13110;Dbxref=GenBank:WP_080219697.1;Name=WP_080219697.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461072.1;locus_tag=C9E94_RS13110;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WP_080219697.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	72243	73484	.	-	.	ID=gene-C9E94_RS13115;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=C9E94_RS13115;old_locus_tag=C9E94_13430
NZ_PYJR01000095.1	Protein Homology	CDS	72243	73484	.	-	0	ID=cds-WP_135401065.1;Parent=gene-C9E94_RS13115;Dbxref=GenBank:WP_135401065.1;Name=WP_135401065.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461071.1;locus_tag=C9E94_RS13115;product=multidrug efflux RND transporter subunit MdtA;protein_id=WP_135401065.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	73767	73826	.	+	.	ID=gene-C9E94_RS13120;Name=ibsA;gbkey=Gene;gene=ibsA;gene_biotype=protein_coding;locus_tag=C9E94_RS13120;old_locus_tag=C9E94_13435
NZ_PYJR01000095.1	Protein Homology	CDS	73767	73826	.	+	0	ID=cds-WP_001805500.1;Parent=gene-C9E94_RS13120;Dbxref=GenBank:WP_001805500.1;Name=WP_001805500.1;gbkey=CDS;gene=ibsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=C9E94_RS13120;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001805500.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	73925	75277	.	-	.	ID=gene-C9E94_RS13125;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=C9E94_RS13125;old_locus_tag=C9E94_13440
NZ_PYJR01000095.1	Protein Homology	CDS	73925	75277	.	-	0	ID=cds-WP_000469637.1;Parent=gene-C9E94_RS13125;Dbxref=GenBank:WP_000469637.1;Name=WP_000469637.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461070.1;locus_tag=C9E94_RS13125;product=molecular chaperone;protein_id=WP_000469637.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	75411	76280	.	+	.	ID=gene-C9E94_RS13130;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=C9E94_RS13130;old_locus_tag=C9E94_13450
NZ_PYJR01000095.1	Protein Homology	CDS	75411	76280	.	+	0	ID=cds-WP_000494703.1;Parent=gene-C9E94_RS13130;Dbxref=GenBank:WP_000494703.1;Name=WP_000494703.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461069.1;locus_tag=C9E94_RS13130;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_000494703.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	76248	79238	.	-	.	ID=gene-C9E94_RS13135;Name=C9E94_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13135;old_locus_tag=C9E94_13455
NZ_PYJR01000095.1	Protein Homology	CDS	76248	79238	.	-	0	ID=cds-WP_135401066.1;Parent=gene-C9E94_RS13135;Dbxref=GenBank:WP_135401066.1;Name=WP_135401066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461068.1;locus_tag=C9E94_RS13135;product=MASE1 domain-containing protein;protein_id=WP_135401066.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	79569	80210	.	+	.	ID=gene-C9E94_RS13140;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=C9E94_RS13140;old_locus_tag=C9E94_13460
NZ_PYJR01000095.1	Protein Homology	CDS	79569	80210	.	+	0	ID=cds-WP_000132082.1;Parent=gene-C9E94_RS13140;Dbxref=GenBank:WP_000132082.1;Name=WP_000132082.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461067.1;locus_tag=C9E94_RS13140;product=uridine kinase;protein_id=WP_000132082.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	80301	80882	.	+	.	ID=gene-C9E94_RS13145;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=C9E94_RS13145;old_locus_tag=C9E94_13465
NZ_PYJR01000095.1	Protein Homology	CDS	80301	80882	.	+	0	ID=cds-WP_001234783.1;Parent=gene-C9E94_RS13145;Dbxref=GenBank:WP_001234783.1;Name=WP_001234783.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=C9E94_RS13145;product=dCTP deaminase;protein_id=WP_001234783.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	80921	82777	.	+	.	ID=gene-C9E94_RS13150;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=C9E94_RS13150;old_locus_tag=C9E94_13470
NZ_PYJR01000095.1	Protein Homology	CDS	80921	82777	.	+	0	ID=cds-WP_001252259.1;Parent=gene-C9E94_RS13150;Dbxref=GenBank:WP_001252259.1;Name=WP_001252259.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461065.1;locus_tag=C9E94_RS13150;product=outer membrane assembly protein AsmA;protein_id=WP_001252259.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	82863	84443	.	-	.	ID=gene-C9E94_RS13155;Name=C9E94_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13155;old_locus_tag=C9E94_13475
NZ_PYJR01000095.1	Protein Homology	CDS	82863	84443	.	-	0	ID=cds-WP_000454712.1;Parent=gene-C9E94_RS13155;Dbxref=GenBank:WP_000454712.1;Name=WP_000454712.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461064.1;locus_tag=C9E94_RS13155;product=TerC family protein;protein_id=WP_000454712.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	85118	86257	.	+	.	ID=gene-C9E94_RS13160;Name=C9E94_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13160;old_locus_tag=C9E94_13485
NZ_PYJR01000095.1	Protein Homology	CDS	85118	86257	.	+	0	ID=cds-WP_000978076.1;Parent=gene-C9E94_RS13160;Dbxref=GenBank:WP_000978076.1;Name=WP_000978076.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=C9E94_RS13160;product=polysaccharide export protein;protein_id=WP_000978076.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	86263	86712	.	+	.	ID=gene-C9E94_RS13165;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=C9E94_RS13165;old_locus_tag=C9E94_13490
NZ_PYJR01000095.1	Protein Homology	CDS	86263	86712	.	+	0	ID=cds-WP_000482226.1;Parent=gene-C9E94_RS13165;Dbxref=GenBank:WP_000482226.1;Name=WP_000482226.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461062.1;locus_tag=C9E94_RS13165;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_000482226.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	86709	88868	.	+	.	ID=gene-C9E94_RS13170;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=C9E94_RS13170;old_locus_tag=C9E94_13495
NZ_PYJR01000095.1	Protein Homology	CDS	86709	88868	.	+	0	ID=cds-WP_000137229.1;Parent=gene-C9E94_RS13170;Dbxref=GenBank:WP_000137229.1;Name=WP_000137229.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461061.1;locus_tag=C9E94_RS13170;product=tyrosine-protein kinase Wzc;protein_id=WP_000137229.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	88956	89798	.	+	.	ID=gene-C9E94_RS13175;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=C9E94_RS13175;old_locus_tag=C9E94_13500
NZ_PYJR01000095.1	Protein Homology	CDS	88956	89798	.	+	0	ID=cds-WP_000205695.1;Parent=gene-C9E94_RS13175;Dbxref=GenBank:WP_000205695.1;Name=WP_000205695.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=C9E94_RS13175;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WP_000205695.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	89801	90289	.	+	.	ID=gene-C9E94_RS13180;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=C9E94_RS13180;old_locus_tag=C9E94_13505
NZ_PYJR01000095.1	Protein Homology	CDS	89801	90289	.	+	0	ID=cds-WP_135401067.1;Parent=gene-C9E94_RS13180;Dbxref=GenBank:WP_135401067.1;Name=WP_135401067.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461059.1;locus_tag=C9E94_RS13180;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WP_135401067.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	90286	91503	.	+	.	ID=gene-C9E94_RS13185;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=C9E94_RS13185;old_locus_tag=C9E94_13510
NZ_PYJR01000095.1	Protein Homology	CDS	90286	91503	.	+	0	ID=cds-WP_023245291.1;Parent=gene-C9E94_RS13185;Dbxref=GenBank:WP_023245291.1;Name=WP_023245291.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461058.1;locus_tag=C9E94_RS13185;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WP_023245291.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	91478	92692	.	+	.	ID=gene-C9E94_RS13190;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=C9E94_RS13190;old_locus_tag=C9E94_13515
NZ_PYJR01000095.1	Protein Homology	CDS	91478	92692	.	+	0	ID=cds-WP_000091392.1;Parent=gene-C9E94_RS13190;Dbxref=GenBank:WP_000091392.1;Name=WP_000091392.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461057.1;locus_tag=C9E94_RS13190;product=colanic acid polymerase WcaD;protein_id=WP_000091392.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	92705	93451	.	+	.	ID=gene-C9E94_RS13195;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=C9E94_RS13195;old_locus_tag=C9E94_13520
NZ_PYJR01000095.1	Protein Homology	CDS	92705	93451	.	+	0	ID=cds-WP_135401068.1;Parent=gene-C9E94_RS13195;Dbxref=GenBank:WP_135401068.1;Name=WP_135401068.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461056.1;locus_tag=C9E94_RS13195;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WP_135401068.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	93467	94021	.	+	.	ID=gene-C9E94_RS13200;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=C9E94_RS13200;old_locus_tag=C9E94_13525
NZ_PYJR01000095.1	Protein Homology	CDS	93467	94021	.	+	0	ID=cds-WP_001153601.1;Parent=gene-C9E94_RS13200;Dbxref=GenBank:WP_001153601.1;Name=WP_001153601.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461055.1;locus_tag=C9E94_RS13200;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WP_001153601.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	94045	95166	.	+	.	ID=gene-C9E94_RS13205;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=C9E94_RS13205;old_locus_tag=C9E94_13530
NZ_PYJR01000095.1	Protein Homology	CDS	94045	95166	.	+	0	ID=cds-WP_000048160.1;Parent=gene-C9E94_RS13205;Dbxref=GenBank:WP_000048160.1;Name=WP_000048160.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=C9E94_RS13205;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_000048160.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	95169	96134	.	+	.	ID=gene-C9E94_RS13210;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=C9E94_RS13210;old_locus_tag=C9E94_13535
NZ_PYJR01000095.1	Protein Homology	CDS	95169	96134	.	+	0	ID=cds-WP_001041700.1;Parent=gene-C9E94_RS13210;Dbxref=GenBank:WP_001041700.1;Name=WP_001041700.1;Ontology_term=GO:0042351,GO:0016853,GO:0050577;gbkey=CDS;gene=fcl;go_function=isomerase activity|0016853||IEA,GDP-L-fucose synthase activity|0050577||IEA;go_process='de novo' GDP-L-fucose biosynthetic process|0042351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461053.1;locus_tag=C9E94_RS13210;product=GDP-L-fucose synthase;protein_id=WP_001041700.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	96137	96610	.	+	.	ID=gene-C9E94_RS13215;Name=C9E94_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13215;old_locus_tag=C9E94_13540
NZ_PYJR01000095.1	Protein Homology	CDS	96137	96610	.	+	0	ID=cds-WP_001574640.1;Parent=gene-C9E94_RS13215;Dbxref=GenBank:WP_001574640.1;Name=WP_001574640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526160.1;locus_tag=C9E94_RS13215;product=GDP-mannose mannosyl hydrolase;protein_id=WP_001574640.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	96607	97830	.	+	.	ID=gene-C9E94_RS13220;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=C9E94_RS13220;old_locus_tag=C9E94_13545
NZ_PYJR01000095.1	Protein Homology	CDS	96607	97830	.	+	0	ID=cds-WP_000699632.1;Parent=gene-C9E94_RS13220;Dbxref=GenBank:WP_000699632.1;Name=WP_000699632.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461051.1;locus_tag=C9E94_RS13220;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WP_000699632.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	97827	99269	.	+	.	ID=gene-C9E94_RS13225;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=C9E94_RS13225;old_locus_tag=C9E94_13550
NZ_PYJR01000095.1	Protein Homology	CDS	97827	99269	.	+	0	ID=cds-WP_000605946.1;Parent=gene-C9E94_RS13225;Dbxref=GenBank:WP_000605946.1;Name=WP_000605946.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461050.3;locus_tag=C9E94_RS13225;product=mannose-1-phosphate guanyltransferase;protein_id=WP_000605946.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	99380	100750	.	+	.	ID=gene-C9E94_RS13230;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=C9E94_RS13230;old_locus_tag=C9E94_13555
NZ_PYJR01000095.1	Protein Homology	CDS	99380	100750	.	+	0	ID=cds-WP_135401069.1;Parent=gene-C9E94_RS13230;Dbxref=GenBank:WP_135401069.1;Name=WP_135401069.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=C9E94_RS13230;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WP_135401069.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	100804	102198	.	+	.	ID=gene-C9E94_RS13235;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=C9E94_RS13235;old_locus_tag=C9E94_13560
NZ_PYJR01000095.1	Protein Homology	CDS	100804	102198	.	+	0	ID=cds-WP_135401070.1;Parent=gene-C9E94_RS13235;Dbxref=GenBank:WP_135401070.1;Name=WP_135401070.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461048.1;locus_tag=C9E94_RS13235;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_135401070.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	102300	103778	.	+	.	ID=gene-C9E94_RS13240;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=C9E94_RS13240;old_locus_tag=C9E94_13565
NZ_PYJR01000095.1	Protein Homology	CDS	102300	103778	.	+	0	ID=cds-WP_023139021.1;Parent=gene-C9E94_RS13240;Dbxref=GenBank:WP_023139021.1;Name=WP_023139021.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461047.1;locus_tag=C9E94_RS13240;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=WP_023139021.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	103800	105080	.	+	.	ID=gene-C9E94_RS13245;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=C9E94_RS13245;old_locus_tag=C9E94_13570
NZ_PYJR01000095.1	Protein Homology	CDS	103800	105080	.	+	0	ID=cds-WP_135401071.1;Parent=gene-C9E94_RS13245;Dbxref=GenBank:WP_135401071.1;Name=WP_135401071.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=C9E94_RS13245;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_135401071.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	105077	106297	.	+	.	ID=gene-C9E94_RS13250;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=C9E94_RS13250;old_locus_tag=C9E94_13575
NZ_PYJR01000095.1	Protein Homology	CDS	105077	106297	.	+	0	ID=cds-WP_045901292.1;Parent=gene-C9E94_RS13250;Dbxref=GenBank:WP_045901292.1;Name=WP_045901292.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461045.1;locus_tag=C9E94_RS13250;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WP_045901292.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	106308	107711	.	+	.	ID=gene-C9E94_RS13255;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=C9E94_RS13255;old_locus_tag=C9E94_13580
NZ_PYJR01000095.1	Protein Homology	CDS	106308	107711	.	+	0	ID=cds-WP_001111851.1;Parent=gene-C9E94_RS13255;Dbxref=GenBank:WP_001111851.1;Name=WP_001111851.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461044.1;locus_tag=C9E94_RS13255;product=colanic acid biosynthesis protein WcaM;protein_id=WP_001111851.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	107863	108858	.	+	.	ID=gene-C9E94_RS13260;Name=C9E94_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13260;old_locus_tag=C9E94_13585
NZ_PYJR01000095.1	Protein Homology	CDS	107863	108858	.	+	0	ID=cds-WP_001606097.1;Parent=gene-C9E94_RS13260;Dbxref=GenBank:WP_001606097.1;Name=WP_001606097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310874.1;locus_tag=C9E94_RS13260;product=N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans%2Coctacis-undecaprenol 4-epimerase;protein_id=WP_001606097.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	109085	109978	.	+	.	ID=gene-C9E94_RS13265;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=C9E94_RS13265;old_locus_tag=C9E94_13590
NZ_PYJR01000095.1	Protein Homology	CDS	109085	109978	.	+	0	ID=cds-WP_023228420.1;Parent=gene-C9E94_RS13265;Dbxref=GenBank:WP_023228420.1;Name=WP_023228420.1;Ontology_term=GO:0006011,GO:0030234;gbkey=CDS;gene=galF;go_function=enzyme regulator activity|0030234||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461043.1;locus_tag=C9E94_RS13265;product=GalU regulator GalF;protein_id=WP_023228420.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	110355	111428	.	+	.	ID=gene-C9E94_RS13270;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=C9E94_RS13270;old_locus_tag=C9E94_13595
NZ_PYJR01000095.1	Protein Homology	CDS	110355	111428	.	+	0	ID=cds-WP_135401072.1;Parent=gene-C9E94_RS13270;Dbxref=GenBank:WP_135401072.1;Name=WP_135401072.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455061.1;locus_tag=C9E94_RS13270;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_135401072.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	111430	112293	.	+	.	ID=gene-C9E94_RS13275;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=C9E94_RS13275;old_locus_tag=C9E94_13600
NZ_PYJR01000095.1	Protein Homology	CDS	111430	112293	.	+	0	ID=cds-WP_001667087.1;Parent=gene-C9E94_RS13275;Dbxref=GenBank:WP_001667087.1;Name=WP_001667087.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000676087.1;locus_tag=C9E94_RS13275;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_001667087.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	112297	112692	.	+	.	ID=gene-C9E94_RS13280;Name=C9E94_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13280;old_locus_tag=C9E94_13605
NZ_PYJR01000095.1	Protein Homology	CDS	112297	112692	.	+	0	ID=cds-WP_135401073.1;Parent=gene-C9E94_RS13280;Dbxref=GenBank:WP_135401073.1;Name=WP_135401073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001102659.1;locus_tag=C9E94_RS13280;product=sugar 3%2C4-ketoisomerase;protein_id=WP_135401073.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	112692	113156	.	+	.	ID=gene-C9E94_RS13285;Name=C9E94_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13285;old_locus_tag=C9E94_13610
NZ_PYJR01000095.1	Protein Homology	CDS	112692	113156	.	+	0	ID=cds-WP_000469855.1;Parent=gene-C9E94_RS13285;Dbxref=GenBank:WP_000469855.1;Name=WP_000469855.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000469854.1;locus_tag=C9E94_RS13285;product=acyltransferase;protein_id=WP_000469855.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	gene	113153	114256	.	+	.	ID=gene-C9E94_RS13290;Name=C9E94_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS13290;old_locus_tag=C9E94_13615
NZ_PYJR01000095.1	Protein Homology	CDS	113153	114256	.	+	0	ID=cds-WP_135401074.1;Parent=gene-C9E94_RS13290;Dbxref=GenBank:WP_135401074.1;Name=WP_135401074.1;Ontology_term=GO:0008483;gbkey=CDS;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000564888.1;locus_tag=C9E94_RS13290;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_135401074.1;transl_table=11
NZ_PYJR01000095.1	RefSeq	pseudogene	114259	114558	.	+	.	ID=gene-C9E94_RS13295;Name=C9E94_RS13295;end_range=114558,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS13295;old_locus_tag=C9E94_13620;partial=true;pseudo=true
NZ_PYJR01000095.1	GeneMarkS-2+	CDS	114259	114558	.	+	0	ID=cds-C9E94_RS13295;Parent=gene-C9E94_RS13295;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=114558,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS13295;partial=true;product=oligosaccharide flippase family protein;pseudo=true;transl_table=11
##sequence-region NZ_PYJR01000124.1 1 12835
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000124.1	RefSeq	region	1	12835	.	+	.	ID=NZ_PYJR01000124.1:1..12835;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000124.1	RefSeq	pseudogene	1	137	.	+	.	ID=gene-C9E94_RS18145;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=C9E94_RS18145;old_locus_tag=C9E94_18580;partial=true;pseudo=true;start_range=.,1
NZ_PYJR01000124.1	Protein Homology	CDS	1	137	.	+	2	ID=cds-C9E94_RS18145;Parent=gene-C9E94_RS18145;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=C9E94_RS18145;partial=true;product=elongation factor Tu;pseudo=true;start_range=.,1;transl_table=11
NZ_PYJR01000124.1	RefSeq	gene	367	750	.	+	.	ID=gene-C9E94_RS18150;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=C9E94_RS18150;old_locus_tag=C9E94_18585
NZ_PYJR01000124.1	Protein Homology	CDS	367	750	.	+	0	ID=cds-WP_001275691.1;Parent=gene-C9E94_RS18150;Dbxref=GenBank:WP_001275691.1;Name=WP_001275691.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=C9E94_RS18150;product=preprotein translocase subunit SecE;protein_id=WP_001275691.1;transl_table=11
NZ_PYJR01000124.1	RefSeq	gene	752	1297	.	+	.	ID=gene-C9E94_RS18155;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=C9E94_RS18155;old_locus_tag=C9E94_18590
NZ_PYJR01000124.1	Protein Homology	CDS	752	1297	.	+	0	ID=cds-WP_001287521.1;Parent=gene-C9E94_RS18155;Dbxref=GenBank:WP_001287521.1;Name=WP_001287521.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=C9E94_RS18155;product=transcription termination/antitermination protein NusG;protein_id=WP_001287521.1;transl_table=11
NZ_PYJR01000124.1	RefSeq	gene	1455	1883	.	+	.	ID=gene-C9E94_RS18160;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=C9E94_RS18160;old_locus_tag=C9E94_18595
NZ_PYJR01000124.1	Protein Homology	CDS	1455	1883	.	+	0	ID=cds-WP_001085926.1;Parent=gene-C9E94_RS18160;Dbxref=GenBank:WP_001085926.1;Name=WP_001085926.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=C9E94_RS18160;product=50S ribosomal protein L11;protein_id=WP_001085926.1;transl_table=11
NZ_PYJR01000124.1	RefSeq	gene	1887	2591	.	+	.	ID=gene-C9E94_RS18165;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=C9E94_RS18165;old_locus_tag=C9E94_18600
NZ_PYJR01000124.1	Protein Homology	CDS	1887	2591	.	+	0	ID=cds-WP_001096676.1;Parent=gene-C9E94_RS18165;Dbxref=GenBank:WP_001096676.1;Name=WP_001096676.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463019.1;locus_tag=C9E94_RS18165;product=50S ribosomal protein L1;protein_id=WP_001096676.1;transl_table=11
NZ_PYJR01000124.1	RefSeq	gene	3011	3508	.	+	.	ID=gene-C9E94_RS18170;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=C9E94_RS18170;old_locus_tag=C9E94_18610
NZ_PYJR01000124.1	Protein Homology	CDS	3011	3508	.	+	0	ID=cds-WP_001207203.1;Parent=gene-C9E94_RS18170;Dbxref=GenBank:WP_001207203.1;Name=WP_001207203.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=C9E94_RS18170;product=50S ribosomal protein L10;protein_id=WP_001207203.1;transl_table=11
NZ_PYJR01000124.1	RefSeq	gene	3575	3940	.	+	.	ID=gene-C9E94_RS18175;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=C9E94_RS18175;old_locus_tag=C9E94_18615
NZ_PYJR01000124.1	Protein Homology	CDS	3575	3940	.	+	0	ID=cds-WP_000028882.1;Parent=gene-C9E94_RS18175;Dbxref=GenBank:WP_000028882.1;Name=WP_000028882.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=C9E94_RS18175;product=50S ribosomal protein L7/L12;protein_id=WP_000028882.1;transl_table=11
NZ_PYJR01000124.1	RefSeq	gene	4258	8286	.	+	.	ID=gene-C9E94_RS18180;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=C9E94_RS18180;old_locus_tag=C9E94_18620
NZ_PYJR01000124.1	Protein Homology	CDS	4258	8286	.	+	0	ID=cds-WP_000263105.1;Parent=gene-C9E94_RS18180;Dbxref=GenBank:WP_000263105.1;Name=WP_000263105.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=C9E94_RS18180;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_000263105.1;transl_table=11
NZ_PYJR01000124.1	RefSeq	gene	8363	12586	.	+	.	ID=gene-C9E94_RS18185;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=C9E94_RS18185;old_locus_tag=C9E94_18625
NZ_PYJR01000124.1	Protein Homology	CDS	8363	12586	.	+	0	ID=cds-WP_000653965.1;Parent=gene-C9E94_RS18185;Dbxref=GenBank:WP_000653965.1;Name=WP_000653965.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463023.1;locus_tag=C9E94_RS18185;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_000653965.1;transl_table=11
NZ_PYJR01000124.1	RefSeq	pseudogene	12628	12835	.	+	.	ID=gene-C9E94_RS18190;Name=C9E94_RS18190;end_range=12835,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS18190;old_locus_tag=C9E94_18630;partial=true;pseudo=true
NZ_PYJR01000124.1	Protein Homology	CDS	12628	12835	.	+	0	ID=cds-C9E94_RS18190;Parent=gene-C9E94_RS18190;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=12835,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463024.1;locus_tag=C9E94_RS18190;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYJR01000142.1 1 12027
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000142.1	RefSeq	region	1	12027	.	+	.	ID=NZ_PYJR01000142.1:1..12027;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000142.1	RefSeq	gene	74	1174	.	+	.	ID=gene-C9E94_RS23250;Name=C9E94_RS23250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23250;old_locus_tag=C9E94_23845
NZ_PYJR01000142.1	Protein Homology	CDS	74	1174	.	+	0	ID=cds-WP_000828039.1;Parent=gene-C9E94_RS23250;Dbxref=GenBank:WP_000828039.1;Name=WP_000828039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828052.1;locus_tag=C9E94_RS23250;product=YiiG family protein;protein_id=WP_000828039.1;transl_table=11
NZ_PYJR01000142.1	RefSeq	gene	1519	1842	.	-	.	ID=gene-C9E94_RS23255;Name=C9E94_RS23255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23255;old_locus_tag=C9E94_23850
NZ_PYJR01000142.1	Protein Homology	CDS	1519	1842	.	-	0	ID=cds-WP_000527677.1;Parent=gene-C9E94_RS23255;Dbxref=GenBank:WP_000527677.1;Name=WP_000527677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=C9E94_RS23255;product=AzlD domain-containing protein;protein_id=WP_000527677.1;transl_table=11
NZ_PYJR01000142.1	RefSeq	gene	1842	2501	.	-	.	ID=gene-C9E94_RS23260;Name=C9E94_RS23260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23260;old_locus_tag=C9E94_23855
NZ_PYJR01000142.1	Protein Homology	CDS	1842	2501	.	-	0	ID=cds-WP_000683586.1;Parent=gene-C9E94_RS23260;Dbxref=GenBank:WP_000683586.1;Name=WP_000683586.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462922.1;locus_tag=C9E94_RS23260;product=AzlC family ABC transporter permease;protein_id=WP_000683586.1;transl_table=11
NZ_PYJR01000142.1	RefSeq	gene	2602	3150	.	+	.	ID=gene-C9E94_RS23265;Name=C9E94_RS23265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23265;old_locus_tag=C9E94_23860
NZ_PYJR01000142.1	Protein Homology	CDS	2602	3150	.	+	0	ID=cds-WP_001517951.1;Parent=gene-C9E94_RS23265;Dbxref=GenBank:WP_001517951.1;Name=WP_001517951.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1;locus_tag=C9E94_RS23265;product=helix-turn-helix domain-containing protein;protein_id=WP_001517951.1;transl_table=11
NZ_PYJR01000142.1	RefSeq	gene	3239	3553	.	-	.	ID=gene-C9E94_RS23270;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=C9E94_RS23270;old_locus_tag=C9E94_23865
NZ_PYJR01000142.1	Protein Homology	CDS	3239	3553	.	-	0	ID=cds-WP_000619478.1;Parent=gene-C9E94_RS23270;Dbxref=GenBank:WP_000619478.1;Name=WP_000619478.1;Ontology_term=GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462924.1;locus_tag=C9E94_RS23270;product=L-rhamnose mutarotase;protein_id=WP_000619478.1;transl_table=11
NZ_PYJR01000142.1	RefSeq	gene	3550	4698	.	-	.	ID=gene-C9E94_RS23275;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=C9E94_RS23275;old_locus_tag=C9E94_23870
NZ_PYJR01000142.1	Protein Homology	CDS	3550	4698	.	-	0	ID=cds-WP_001627376.1;Parent=gene-C9E94_RS23275;Dbxref=GenBank:WP_001627376.1;Name=WP_001627376.1;Ontology_term=GO:0008912;gbkey=CDS;gene=fucO;go_function=lactaldehyde reductase activity|0008912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462925.1;locus_tag=C9E94_RS23275;product=lactaldehyde reductase;protein_id=WP_001627376.1;transl_table=11
NZ_PYJR01000142.1	RefSeq	gene	4825	5652	.	-	.	ID=gene-C9E94_RS23280;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=C9E94_RS23280;old_locus_tag=C9E94_23875
NZ_PYJR01000142.1	Protein Homology	CDS	4825	5652	.	-	0	ID=cds-WP_001179696.1;Parent=gene-C9E94_RS23280;Dbxref=GenBank:WP_001179696.1;Name=WP_001179696.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462926.1;locus_tag=C9E94_RS23280;product=rhamnulose-1-phosphate aldolase;protein_id=WP_001179696.1;transl_table=11
NZ_PYJR01000142.1	RefSeq	gene	5796	7055	.	-	.	ID=gene-C9E94_RS23290;Name=C9E94_RS23290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23290;old_locus_tag=C9E94_23885
NZ_PYJR01000142.1	Protein Homology	CDS	5796	7055	.	-	0	ID=cds-WP_000211469.1;Parent=gene-C9E94_RS23290;Dbxref=GenBank:WP_000211469.1;Name=WP_000211469.1;Ontology_term=GO:0008740,GO:0030145;gbkey=CDS;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462927.1;locus_tag=C9E94_RS23290;product=L-rhamnose isomerase;protein_id=WP_000211469.1;transl_table=11
NZ_PYJR01000142.1	RefSeq	gene	7052	8521	.	-	.	ID=gene-C9E94_RS23295;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=C9E94_RS23295;old_locus_tag=C9E94_23890
NZ_PYJR01000142.1	Protein Homology	CDS	7052	8521	.	-	0	ID=cds-WP_135401269.1;Parent=gene-C9E94_RS23295;Dbxref=GenBank:WP_135401269.1;Name=WP_135401269.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462928.1;locus_tag=C9E94_RS23295;product=rhamnulokinase;protein_id=WP_135401269.1;transl_table=11
NZ_PYJR01000142.1	RefSeq	gene	8809	9645	.	+	.	ID=gene-C9E94_RS23300;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=C9E94_RS23300;old_locus_tag=C9E94_23895
NZ_PYJR01000142.1	Protein Homology	CDS	8809	9645	.	+	0	ID=cds-WP_000217112.1;Parent=gene-C9E94_RS23300;Dbxref=GenBank:WP_000217112.1;Name=WP_000217112.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462929.1;locus_tag=C9E94_RS23300;product=HTH-type transcriptional activator RhaS;protein_id=WP_000217112.1;transl_table=11
NZ_PYJR01000142.1	RefSeq	gene	9798	10646	.	+	.	ID=gene-C9E94_RS23305;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=C9E94_RS23305;old_locus_tag=C9E94_23905
NZ_PYJR01000142.1	Protein Homology	CDS	9798	10646	.	+	0	ID=cds-WP_000013290.1;Parent=gene-C9E94_RS23305;Dbxref=GenBank:WP_000013290.1;Name=WP_000013290.1;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462930.1;locus_tag=C9E94_RS23305;product=HTH-type transcriptional activator RhaR;protein_id=WP_000013290.1;transl_table=11
NZ_PYJR01000142.1	RefSeq	gene	10643	11677	.	-	.	ID=gene-C9E94_RS23310;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=C9E94_RS23310;old_locus_tag=C9E94_23910
NZ_PYJR01000142.1	Protein Homology	CDS	10643	11677	.	-	0	ID=cds-WP_000063541.1;Parent=gene-C9E94_RS23310;Dbxref=GenBank:WP_000063541.1;Name=WP_000063541.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=C9E94_RS23310;product=L-rhamnose/proton symporter RhaT;protein_id=WP_000063541.1;transl_table=11
##sequence-region NZ_PYJR01000089.1 1 11435
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000089.1	RefSeq	region	1	11435	.	+	.	ID=NZ_PYJR01000089.1:1..11435;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000089.1	RefSeq	gene	169	636	.	+	.	ID=gene-C9E94_RS11950;Name=C9E94_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11950;old_locus_tag=C9E94_12220
NZ_PYJR01000089.1	Protein Homology	CDS	169	636	.	+	0	ID=cds-WP_061424157.1;Parent=gene-C9E94_RS11950;Dbxref=GenBank:WP_061424157.1;Name=WP_061424157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829719.1;locus_tag=C9E94_RS11950;product=DUF5680 domain-containing protein;protein_id=WP_061424157.1;transl_table=11
NZ_PYJR01000089.1	RefSeq	gene	810	1853	.	+	.	ID=gene-C9E94_RS11955;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=C9E94_RS11955;old_locus_tag=C9E94_12225
NZ_PYJR01000089.1	Protein Homology	CDS	810	1853	.	+	0	ID=cds-WP_061379697.1;Parent=gene-C9E94_RS11955;Dbxref=GenBank:WP_061379697.1;Name=WP_061379697.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=C9E94_RS11955;product=quinolinate synthase NadA;protein_id=WP_061379697.1;transl_table=11
NZ_PYJR01000089.1	RefSeq	gene	1878	2597	.	+	.	ID=gene-C9E94_RS11960;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=C9E94_RS11960;old_locus_tag=C9E94_12230
NZ_PYJR01000089.1	Protein Homology	CDS	1878	2597	.	+	0	ID=cds-WP_061379696.1;Parent=gene-C9E94_RS11960;Dbxref=GenBank:WP_061379696.1;Name=WP_061379696.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459737.1;locus_tag=C9E94_RS11960;product=nicotinamide riboside transporter PnuC;protein_id=WP_061379696.1;transl_table=11
NZ_PYJR01000089.1	RefSeq	gene	2594	3532	.	-	.	ID=gene-C9E94_RS11965;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=C9E94_RS11965;old_locus_tag=C9E94_12235
NZ_PYJR01000089.1	Protein Homology	CDS	2594	3532	.	-	0	ID=cds-WP_000951250.1;Parent=gene-C9E94_RS11965;Dbxref=GenBank:WP_000951250.1;Name=WP_000951250.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459738.1;locus_tag=C9E94_RS11965;product=CDF family zinc transporter ZitB;protein_id=WP_000951250.1;transl_table=11
NZ_PYJR01000089.1	RefSeq	gene	3643	4029	.	-	.	ID=gene-C9E94_RS11970;Name=C9E94_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11970;old_locus_tag=C9E94_12240
NZ_PYJR01000089.1	Protein Homology	CDS	3643	4029	.	-	0	ID=cds-WP_000784380.1;Parent=gene-C9E94_RS11970;Dbxref=GenBank:WP_000784380.1;Name=WP_000784380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459739.1;locus_tag=C9E94_RS11970;product=YbgS-like family protein;protein_id=WP_000784380.1;transl_table=11
NZ_PYJR01000089.1	RefSeq	gene	4349	5401	.	+	.	ID=gene-C9E94_RS11975;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=C9E94_RS11975;old_locus_tag=C9E94_12245
NZ_PYJR01000089.1	Protein Homology	CDS	4349	5401	.	+	0	ID=cds-WP_001109234.1;Parent=gene-C9E94_RS11975;Dbxref=GenBank:WP_001109234.1;Name=WP_001109234.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=C9E94_RS11975;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_001109234.1;transl_table=11
NZ_PYJR01000089.1	RefSeq	gene	5495	6040	.	-	.	ID=gene-C9E94_RS11980;Name=C9E94_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11980;old_locus_tag=C9E94_12250
NZ_PYJR01000089.1	Protein Homology	CDS	5495	6040	.	-	0	ID=cds-WP_000970374.1;Parent=gene-C9E94_RS11980;Dbxref=GenBank:WP_000970374.1;Name=WP_000970374.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459741.1;locus_tag=C9E94_RS11980;product=FumA C-terminus/TtdB family hydratase beta subunit;protein_id=WP_000970374.1;transl_table=11
NZ_PYJR01000089.1	RefSeq	gene	6055	6900	.	-	.	ID=gene-C9E94_RS11985;Name=C9E94_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11985;old_locus_tag=C9E94_12255
NZ_PYJR01000089.1	Protein Homology	CDS	6055	6900	.	-	0	ID=cds-WP_000086831.1;Parent=gene-C9E94_RS11985;Dbxref=GenBank:WP_000086831.1;Name=WP_000086831.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459742.1;locus_tag=C9E94_RS11985;product=fumarate hydratase;protein_id=WP_000086831.1;transl_table=11
NZ_PYJR01000089.1	RefSeq	gene	7030	7920	.	+	.	ID=gene-C9E94_RS11990;Name=C9E94_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11990;old_locus_tag=C9E94_12260
NZ_PYJR01000089.1	Protein Homology	CDS	7030	7920	.	+	0	ID=cds-WP_000405927.1;Parent=gene-C9E94_RS11990;Dbxref=GenBank:WP_000405927.1;Name=WP_000405927.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539513.1;locus_tag=C9E94_RS11990;product=LysR family transcriptional regulator;protein_id=WP_000405927.1;transl_table=11
NZ_PYJR01000089.1	RefSeq	gene	7921	8904	.	-	.	ID=gene-C9E94_RS11995;Name=C9E94_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11995;old_locus_tag=C9E94_12265
NZ_PYJR01000089.1	Protein Homology	CDS	7921	8904	.	-	0	ID=cds-WP_000282119.1;Parent=gene-C9E94_RS11995;Dbxref=GenBank:WP_000282119.1;Name=WP_000282119.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459744.1;locus_tag=C9E94_RS11995;product=LysR family transcriptional regulator;protein_id=WP_000282119.1;transl_table=11
NZ_PYJR01000089.1	RefSeq	gene	9127	10395	.	+	.	ID=gene-C9E94_RS12000;Name=C9E94_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12000;old_locus_tag=C9E94_12270
NZ_PYJR01000089.1	Protein Homology	CDS	9127	10395	.	+	0	ID=cds-WP_023193244.1;Parent=gene-C9E94_RS12000;Dbxref=GenBank:WP_023193244.1;Name=WP_023193244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074132.1;locus_tag=C9E94_RS12000;product=SLC13 family permease;protein_id=WP_023193244.1;transl_table=11
NZ_PYJR01000089.1	RefSeq	gene	10445	10690	.	+	.	ID=gene-C9E94_RS12005;Name=C9E94_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12005;old_locus_tag=C9E94_12275
NZ_PYJR01000089.1	Protein Homology	CDS	10445	10690	.	+	0	ID=cds-WP_001089088.1;Parent=gene-C9E94_RS12005;Dbxref=GenBank:WP_001089088.1;Name=WP_001089088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459746.1;locus_tag=C9E94_RS12005;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_001089088.1;transl_table=11
NZ_PYJR01000089.1	RefSeq	gene	10706	11435	.	+	.	ID=gene-C9E94_RS12010;Name=C9E94_RS12010;end_range=11435,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS12010;old_locus_tag=C9E94_12280;partial=true
NZ_PYJR01000089.1	Protein Homology	CDS	10706	11435	.	+	0	ID=cds-WP_135401043.1;Parent=gene-C9E94_RS12010;Dbxref=GenBank:WP_135401043.1;Name=WP_135401043.1;Ontology_term=GO:0003824;end_range=11435,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9E94_RS12010;partial=true;product=pyruvate carboxylase subunit B;protein_id=WP_135401043.1;transl_table=11
##sequence-region NZ_PYJR01000115.1 1 10975
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000115.1	RefSeq	region	1	10975	.	+	.	ID=NZ_PYJR01000115.1:1..10975;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000115.1	RefSeq	gene	134	1801	.	-	.	ID=gene-C9E94_RS17415;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=C9E94_RS17415;old_locus_tag=C9E94_17845
NZ_PYJR01000115.1	Protein Homology	CDS	134	1801	.	-	0	ID=cds-WP_001287181.1;Parent=gene-C9E94_RS17415;Dbxref=GenBank:WP_001287181.1;Name=WP_001287181.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459671.1;locus_tag=C9E94_RS17415;product=glutamine--tRNA ligase;protein_id=WP_001287181.1;transl_table=11
NZ_PYJR01000115.1	RefSeq	gene	2012	3964	.	-	.	ID=gene-C9E94_RS17420;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=C9E94_RS17420;old_locus_tag=C9E94_17850
NZ_PYJR01000115.1	Protein Homology	CDS	2012	3964	.	-	0	ID=cds-WP_001023069.1;Parent=gene-C9E94_RS17420;Dbxref=GenBank:WP_001023069.1;Name=WP_001023069.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459670.1;locus_tag=C9E94_RS17420;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_001023069.1;transl_table=11
NZ_PYJR01000115.1	RefSeq	gene	4291	5091	.	+	.	ID=gene-C9E94_RS17425;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=C9E94_RS17425;old_locus_tag=C9E94_17855
NZ_PYJR01000115.1	Protein Homology	CDS	4291	5091	.	+	0	ID=cds-WP_001237059.1;Parent=gene-C9E94_RS17425;Dbxref=GenBank:WP_001237059.1;Name=WP_001237059.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=C9E94_RS17425;product=glucosamine-6-phosphate deaminase;protein_id=WP_001237059.1;transl_table=11
NZ_PYJR01000115.1	RefSeq	gene	5151	6305	.	+	.	ID=gene-C9E94_RS17430;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=C9E94_RS17430;old_locus_tag=C9E94_17860
NZ_PYJR01000115.1	Protein Homology	CDS	5151	6305	.	+	0	ID=cds-WP_000271186.1;Parent=gene-C9E94_RS17430;Dbxref=GenBank:WP_000271186.1;Name=WP_000271186.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459668.1;locus_tag=C9E94_RS17430;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_000271186.1;transl_table=11
NZ_PYJR01000115.1	RefSeq	gene	6310	7530	.	+	.	ID=gene-C9E94_RS17435;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=C9E94_RS17435;old_locus_tag=C9E94_17865
NZ_PYJR01000115.1	Protein Homology	CDS	6310	7530	.	+	0	ID=cds-WP_000187578.1;Parent=gene-C9E94_RS17435;Dbxref=GenBank:WP_000187578.1;Name=WP_000187578.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459667.1;locus_tag=C9E94_RS17435;product=DNA-binding transcriptional regulator NagC;protein_id=WP_000187578.1;transl_table=11
NZ_PYJR01000115.1	RefSeq	gene	7577	8329	.	+	.	ID=gene-C9E94_RS17440;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=C9E94_RS17440;old_locus_tag=C9E94_17870
NZ_PYJR01000115.1	Protein Homology	CDS	7577	8329	.	+	0	ID=cds-WP_000153143.1;Parent=gene-C9E94_RS17440;Dbxref=GenBank:WP_000153143.1;Name=WP_000153143.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373873.1;locus_tag=C9E94_RS17440;product=ribonucleotide monophosphatase NagD;protein_id=WP_000153143.1;transl_table=11
NZ_PYJR01000115.1	RefSeq	gene	8619	10283	.	+	.	ID=gene-C9E94_RS17450;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=C9E94_RS17450;old_locus_tag=C9E94_17875
NZ_PYJR01000115.1	Protein Homology	CDS	8619	10283	.	+	0	ID=cds-WP_000337034.1;Parent=gene-C9E94_RS17450;Dbxref=GenBank:WP_000337034.1;Name=WP_000337034.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=C9E94_RS17450;product=asparagine synthase B;protein_id=WP_000337034.1;transl_table=11
NZ_PYJR01000115.1	RefSeq	gene	10505	10581	.	+	.	ID=gene-C9E94_RS17455;Name=C9E94_RS17455;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS17455;old_locus_tag=C9E94_17880
NZ_PYJR01000115.1	tRNAscan-SE	tRNA	10505	10581	.	+	.	ID=rna-C9E94_RS17455;Parent=gene-C9E94_RS17455;anticodon=(pos:10539..10541);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS17455;product=tRNA-Met
NZ_PYJR01000115.1	tRNAscan-SE	exon	10505	10581	.	+	.	ID=exon-C9E94_RS17455-1;Parent=rna-C9E94_RS17455;anticodon=(pos:10539..10541);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS17455;product=tRNA-Met
NZ_PYJR01000115.1	RefSeq	gene	10590	10674	.	+	.	ID=gene-C9E94_RS17460;Name=C9E94_RS17460;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS17460;old_locus_tag=C9E94_17885
NZ_PYJR01000115.1	tRNAscan-SE	tRNA	10590	10674	.	+	.	ID=rna-C9E94_RS17460;Parent=gene-C9E94_RS17460;anticodon=(pos:10624..10626);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS17460;product=tRNA-Leu
NZ_PYJR01000115.1	tRNAscan-SE	exon	10590	10674	.	+	.	ID=exon-C9E94_RS17460-1;Parent=rna-C9E94_RS17460;anticodon=(pos:10624..10626);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS17460;product=tRNA-Leu
NZ_PYJR01000115.1	RefSeq	gene	10698	10772	.	+	.	ID=gene-C9E94_RS17465;Name=C9E94_RS17465;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS17465;old_locus_tag=C9E94_17890
NZ_PYJR01000115.1	tRNAscan-SE	tRNA	10698	10772	.	+	.	ID=rna-C9E94_RS17465;Parent=gene-C9E94_RS17465;anticodon=(pos:10730..10732);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS17465;product=tRNA-Gln
NZ_PYJR01000115.1	tRNAscan-SE	exon	10698	10772	.	+	.	ID=exon-C9E94_RS17465-1;Parent=rna-C9E94_RS17465;anticodon=(pos:10730..10732);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS17465;product=tRNA-Gln
NZ_PYJR01000115.1	RefSeq	gene	10808	10882	.	+	.	ID=gene-C9E94_RS17470;Name=C9E94_RS17470;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS17470;old_locus_tag=C9E94_17895
NZ_PYJR01000115.1	tRNAscan-SE	tRNA	10808	10882	.	+	.	ID=rna-C9E94_RS17470;Parent=gene-C9E94_RS17470;anticodon=(pos:10840..10842);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS17470;product=tRNA-Gln
NZ_PYJR01000115.1	tRNAscan-SE	exon	10808	10882	.	+	.	ID=exon-C9E94_RS17470-1;Parent=rna-C9E94_RS17470;anticodon=(pos:10840..10842);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS17470;product=tRNA-Gln
NZ_PYJR01000115.1	RefSeq	gene	10898	10974	.	+	.	ID=gene-C9E94_RS17475;Name=C9E94_RS17475;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS17475;old_locus_tag=C9E94_17900
NZ_PYJR01000115.1	tRNAscan-SE	tRNA	10898	10974	.	+	.	ID=rna-C9E94_RS17475;Parent=gene-C9E94_RS17475;anticodon=(pos:10932..10934);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS17475;product=tRNA-Met
NZ_PYJR01000115.1	tRNAscan-SE	exon	10898	10974	.	+	.	ID=exon-C9E94_RS17475-1;Parent=rna-C9E94_RS17475;anticodon=(pos:10932..10934);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS17475;product=tRNA-Met
##sequence-region NZ_PYJR01000002.1 1 9938
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000002.1	RefSeq	region	1	9938	.	+	.	ID=NZ_PYJR01000002.1:1..9938;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000002.1	RefSeq	gene	60	1085	.	-	.	ID=gene-C9E94_RS00010;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=C9E94_RS00010;old_locus_tag=C9E94_00010
NZ_PYJR01000002.1	Protein Homology	CDS	60	1085	.	-	0	ID=cds-WP_000645990.1;Parent=gene-C9E94_RS00010;Dbxref=GenBank:WP_000645990.1;Name=WP_000645990.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=C9E94_RS00010;product=L-threonine 3-dehydrogenase;protein_id=WP_000645990.1;transl_table=11
NZ_PYJR01000002.1	RefSeq	gene	1095	2291	.	-	.	ID=gene-C9E94_RS00015;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=C9E94_RS00015;old_locus_tag=C9E94_00015
NZ_PYJR01000002.1	Protein Homology	CDS	1095	2291	.	-	0	ID=cds-WP_001213790.1;Parent=gene-C9E94_RS00015;Dbxref=GenBank:WP_001213790.1;Name=WP_001213790.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=C9E94_RS00015;product=glycine C-acetyltransferase;protein_id=WP_001213790.1;transl_table=11
NZ_PYJR01000002.1	RefSeq	gene	2494	3426	.	+	.	ID=gene-C9E94_RS00020;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=C9E94_RS00020;old_locus_tag=C9E94_00020
NZ_PYJR01000002.1	Protein Homology	CDS	2494	3426	.	+	0	ID=cds-WP_000587771.1;Parent=gene-C9E94_RS00020;Dbxref=GenBank:WP_000587771.1;Name=WP_000587771.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=C9E94_RS00020;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_000587771.1;transl_table=11
NZ_PYJR01000002.1	RefSeq	gene	3429	4475	.	+	.	ID=gene-C9E94_RS00025;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=C9E94_RS00025;old_locus_tag=C9E94_00025
NZ_PYJR01000002.1	Protein Homology	CDS	3429	4475	.	+	0	ID=cds-WP_000699196.1;Parent=gene-C9E94_RS00025;Dbxref=GenBank:WP_000699196.1;Name=WP_000699196.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462611.1;locus_tag=C9E94_RS00025;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_000699196.1;transl_table=11
NZ_PYJR01000002.1	RefSeq	gene	4475	5428	.	+	.	ID=gene-C9E94_RS00030;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=C9E94_RS00030;old_locus_tag=C9E94_00030
NZ_PYJR01000002.1	Protein Homology	CDS	4475	5428	.	+	0	ID=cds-WP_001264604.1;Parent=gene-C9E94_RS00030;Dbxref=GenBank:WP_001264604.1;Name=WP_001264604.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462612.1;locus_tag=C9E94_RS00030;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_001264604.1;transl_table=11
NZ_PYJR01000002.1	RefSeq	gene	5468	6682	.	+	.	ID=gene-C9E94_RS00035;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=protein_coding;locus_tag=C9E94_RS00035;old_locus_tag=C9E94_00035
NZ_PYJR01000002.1	Protein Homology	CDS	5468	6682	.	+	0	ID=cds-WP_135400720.1;Parent=gene-C9E94_RS00035;Dbxref=GenBank:WP_135400720.1;Name=WP_135400720.1;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462613.1;locus_tag=C9E94_RS00035;product=O-antigen ligase RfaL;protein_id=WP_135400720.1;transl_table=11
NZ_PYJR01000002.1	RefSeq	gene	6739	7884	.	-	.	ID=gene-C9E94_RS00040;Name=C9E94_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00040;old_locus_tag=C9E94_00040
NZ_PYJR01000002.1	Protein Homology	CDS	6739	7884	.	-	0	ID=cds-WP_000591818.1;Parent=gene-C9E94_RS00040;Dbxref=GenBank:WP_000591818.1;Name=WP_000591818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462614.1;locus_tag=C9E94_RS00040;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=WP_000591818.1;transl_table=11
NZ_PYJR01000002.1	RefSeq	gene	7985	8794	.	-	.	ID=gene-C9E94_RS00045;Name=waaZ;gbkey=Gene;gene=waaZ;gene_biotype=protein_coding;locus_tag=C9E94_RS00045;old_locus_tag=C9E94_00045
NZ_PYJR01000002.1	Protein Homology	CDS	7985	8794	.	-	0	ID=cds-WP_000536012.1;Parent=gene-C9E94_RS00045;Dbxref=GenBank:WP_000536012.1;Name=WP_000536012.1;gbkey=CDS;gene=waaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462615.1;locus_tag=C9E94_RS00045;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;protein_id=WP_000536012.1;transl_table=11
NZ_PYJR01000002.1	RefSeq	gene	8944	9642	.	-	.	ID=gene-C9E94_RS00050;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=C9E94_RS00050;old_locus_tag=C9E94_00050
NZ_PYJR01000002.1	Protein Homology	CDS	8944	9642	.	-	0	ID=cds-WP_000582809.1;Parent=gene-C9E94_RS00050;Dbxref=GenBank:WP_000582809.1;Name=WP_000582809.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462616.1;locus_tag=C9E94_RS00050;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_000582809.1;transl_table=11
NZ_PYJR01000002.1	RefSeq	pseudogene	9665	9938	.	-	.	ID=gene-C9E94_RS00055;Name=rfaJ;end_range=9938,.;gbkey=Gene;gene=rfaJ;gene_biotype=pseudogene;locus_tag=C9E94_RS00055;old_locus_tag=C9E94_00055;partial=true;pseudo=true
NZ_PYJR01000002.1	Protein Homology	CDS	9665	9938	.	-	1	ID=cds-C9E94_RS00055;Parent=gene-C9E94_RS00055;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=9938,.;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462617.1;locus_tag=C9E94_RS00055;partial=true;product=lipopolysaccharide 1%2C2-glucosyltransferase RfaJ;pseudo=true;transl_table=11
##sequence-region NZ_PYJR01000048.1 1 9732
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000048.1	RefSeq	region	1	9732	.	+	.	ID=NZ_PYJR01000048.1:1..9732;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000048.1	RefSeq	gene	104	1495	.	+	.	ID=gene-C9E94_RS06120;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=C9E94_RS06120;old_locus_tag=C9E94_06280
NZ_PYJR01000048.1	Protein Homology	CDS	104	1495	.	+	0	ID=cds-WP_000115428.1;Parent=gene-C9E94_RS06120;Dbxref=GenBank:WP_000115428.1;Name=WP_000115428.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462647.1;locus_tag=C9E94_RS06120;product=xanthine/proton symporter XanP;protein_id=WP_000115428.1;transl_table=11
NZ_PYJR01000048.1	RefSeq	gene	1616	3325	.	+	.	ID=gene-C9E94_RS06125;Name=C9E94_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06125;old_locus_tag=C9E94_06285
NZ_PYJR01000048.1	Protein Homology	CDS	1616	3325	.	+	0	ID=cds-WP_000766646.1;Parent=gene-C9E94_RS06125;Dbxref=GenBank:WP_000766646.1;Name=WP_000766646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462648.1;locus_tag=C9E94_RS06125;product=AsmA family protein;protein_id=WP_000766646.1;transl_table=11
NZ_PYJR01000048.1	RefSeq	gene	3428	5746	.	-	.	ID=gene-C9E94_RS06130;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=C9E94_RS06130;old_locus_tag=C9E94_06290
NZ_PYJR01000048.1	Protein Homology	CDS	3428	5746	.	-	0	ID=cds-WP_135400880.1;Parent=gene-C9E94_RS06130;Dbxref=GenBank:WP_135400880.1;Name=WP_135400880.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462649.1;locus_tag=C9E94_RS06130;product=alpha-xylosidase;protein_id=WP_135400880.1;transl_table=11
NZ_PYJR01000048.1	RefSeq	gene	5758	7140	.	-	.	ID=gene-C9E94_RS06135;Name=C9E94_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06135;old_locus_tag=C9E94_06295
NZ_PYJR01000048.1	Protein Homology	CDS	5758	7140	.	-	0	ID=cds-WP_135400881.1;Parent=gene-C9E94_RS06135;Dbxref=GenBank:WP_135400881.1;Name=WP_135400881.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462650.1;locus_tag=C9E94_RS06135;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_135400881.1;transl_table=11
NZ_PYJR01000048.1	RefSeq	gene	7428	7522	.	+	.	ID=gene-C9E94_RS06140;Name=C9E94_RS06140;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS06140;old_locus_tag=C9E94_06300
NZ_PYJR01000048.1	tRNAscan-SE	tRNA	7428	7522	.	+	.	ID=rna-C9E94_RS06140;Parent=gene-C9E94_RS06140;anticodon=(pos:7462..7464);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS06140;product=tRNA-Sec
NZ_PYJR01000048.1	tRNAscan-SE	exon	7428	7522	.	+	.	ID=exon-C9E94_RS06140-1;Parent=rna-C9E94_RS06140;anticodon=(pos:7462..7464);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS06140;product=tRNA-Sec
NZ_PYJR01000048.1	RefSeq	pseudogene	7558	7897	.	-	.	ID=gene-C9E94_RS23430;Name=C9E94_RS23430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23430;partial=true;pseudo=true;start_range=.,7558
NZ_PYJR01000048.1	Protein Homology	CDS	7558	7897	.	-	0	ID=cds-C9E94_RS23430;Parent=gene-C9E94_RS23430;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611920.1;locus_tag=C9E94_RS23430;partial=true;product=transposase;pseudo=true;start_range=.,7558;transl_table=11
NZ_PYJR01000048.1	RefSeq	gene	9145	9732	.	+	.	ID=gene-C9E94_RS06150;Name=C9E94_RS06150;end_range=9732,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06150;old_locus_tag=C9E94_06310;partial=true
NZ_PYJR01000048.1	Protein Homology	CDS	9145	9732	.	+	0	ID=cds-WP_135400882.1;Parent=gene-C9E94_RS06150;Dbxref=GenBank:WP_135400882.1;Name=WP_135400882.1;end_range=9732,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462655.1;locus_tag=C9E94_RS06150;partial=true;product=helix-turn-helix transcriptional regulator;protein_id=WP_135400882.1;transl_table=11
##sequence-region NZ_PYJR01000119.1 1 9701
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000119.1	RefSeq	region	1	9701	.	+	.	ID=NZ_PYJR01000119.1:1..9701;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000119.1	RefSeq	gene	61	1884	.	+	.	ID=gene-C9E94_RS17920;Name=C9E94_RS17920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17920;old_locus_tag=C9E94_18355
NZ_PYJR01000119.1	Protein Homology	CDS	61	1884	.	+	0	ID=cds-WP_135401154.1;Parent=gene-C9E94_RS17920;Dbxref=GenBank:WP_135401154.1;Name=WP_135401154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669888.1;locus_tag=C9E94_RS17920;product=aryl-sulfate sulfotransferase;protein_id=WP_135401154.1;transl_table=11
NZ_PYJR01000119.1	RefSeq	gene	2081	3244	.	-	.	ID=gene-C9E94_RS17925;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=C9E94_RS17925;old_locus_tag=C9E94_18360
NZ_PYJR01000119.1	Protein Homology	CDS	2081	3244	.	-	0	ID=cds-WP_023245425.1;Parent=gene-C9E94_RS17925;Dbxref=GenBank:WP_023245425.1;Name=WP_023245425.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadA;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462867.1;locus_tag=C9E94_RS17925;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_023245425.1;transl_table=11
NZ_PYJR01000119.1	RefSeq	gene	3254	5443	.	-	.	ID=gene-C9E94_RS17930;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=C9E94_RS17930;old_locus_tag=C9E94_18365
NZ_PYJR01000119.1	Protein Homology	CDS	3254	5443	.	-	0	ID=cds-WP_058653610.1;Parent=gene-C9E94_RS17930;Dbxref=GenBank:WP_058653610.1;Name=WP_058653610.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692,GO:0036125;gbkey=CDS;gene=fadB;go_component=fatty acid beta-oxidation multienzyme complex|0036125||IEA;go_function=(3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462868.1;locus_tag=C9E94_RS17930;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_058653610.1;transl_table=11
NZ_PYJR01000119.1	RefSeq	gene	5633	6964	.	+	.	ID=gene-C9E94_RS17935;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=C9E94_RS17935;old_locus_tag=C9E94_18370
NZ_PYJR01000119.1	Protein Homology	CDS	5633	6964	.	+	0	ID=cds-WP_000444529.1;Parent=gene-C9E94_RS17935;Dbxref=GenBank:WP_000444529.1;Name=WP_000444529.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=C9E94_RS17935;product=Xaa-Pro dipeptidase;protein_id=WP_000444529.1;transl_table=11
NZ_PYJR01000119.1	RefSeq	gene	6964	7578	.	+	.	ID=gene-C9E94_RS17940;Name=C9E94_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS17940;old_locus_tag=C9E94_18375
NZ_PYJR01000119.1	Protein Homology	CDS	6964	7578	.	+	0	ID=cds-WP_000378897.1;Parent=gene-C9E94_RS17940;Dbxref=GenBank:WP_000378897.1;Name=WP_000378897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462870.1;locus_tag=C9E94_RS17940;product=IMPACT family protein;protein_id=WP_000378897.1;transl_table=11
NZ_PYJR01000119.1	RefSeq	gene	7617	9068	.	+	.	ID=gene-C9E94_RS17945;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=C9E94_RS17945;old_locus_tag=C9E94_18380
NZ_PYJR01000119.1	Protein Homology	CDS	7617	9068	.	+	0	ID=cds-WP_000545688.1;Parent=gene-C9E94_RS17945;Dbxref=GenBank:WP_000545688.1;Name=WP_000545688.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=C9E94_RS17945;product=Trk system potassium transporter TrkH;protein_id=WP_000545688.1;transl_table=11
NZ_PYJR01000119.1	RefSeq	gene	9080	9625	.	+	.	ID=gene-C9E94_RS17950;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=C9E94_RS17950;old_locus_tag=C9E94_18385
NZ_PYJR01000119.1	Protein Homology	CDS	9080	9625	.	+	0	ID=cds-WP_000853982.1;Parent=gene-C9E94_RS17950;Dbxref=GenBank:WP_000853982.1;Name=WP_000853982.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462872.1;locus_tag=C9E94_RS17950;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_000853982.1;transl_table=11
##sequence-region NZ_PYJR01000083.1 1 9505
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000083.1	RefSeq	region	1	9505	.	+	.	ID=NZ_PYJR01000083.1:1..9505;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000083.1	RefSeq	gene	275	925	.	+	.	ID=gene-C9E94_RS10850;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=C9E94_RS10850;old_locus_tag=C9E94_11080
NZ_PYJR01000083.1	Protein Homology	CDS	275	925	.	+	0	ID=cds-WP_000481517.1;Parent=gene-C9E94_RS10850;Dbxref=GenBank:WP_000481517.1;Name=WP_000481517.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460113.1;locus_tag=C9E94_RS10850;product=biofilm master transcriptional regulator CsgD;protein_id=WP_000481517.1;transl_table=11
NZ_PYJR01000083.1	RefSeq	gene	930	1325	.	+	.	ID=gene-C9E94_RS10855;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=C9E94_RS10855;old_locus_tag=C9E94_11085
NZ_PYJR01000083.1	Protein Homology	CDS	930	1325	.	+	0	ID=cds-WP_000833307.1;Parent=gene-C9E94_RS10855;Dbxref=GenBank:WP_000833307.1;Name=WP_000833307.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460112.1;locus_tag=C9E94_RS10855;product=curli production assembly/transport protein CsgE;protein_id=WP_000833307.1;transl_table=11
NZ_PYJR01000083.1	RefSeq	gene	1352	1768	.	+	.	ID=gene-C9E94_RS10860;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=C9E94_RS10860;old_locus_tag=C9E94_11090
NZ_PYJR01000083.1	Protein Homology	CDS	1352	1768	.	+	0	ID=cds-WP_001264073.1;Parent=gene-C9E94_RS10860;Dbxref=GenBank:WP_001264073.1;Name=WP_001264073.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460111.1;locus_tag=C9E94_RS10860;product=curli production assembly/transport protein CsgF;protein_id=WP_001264073.1;transl_table=11
NZ_PYJR01000083.1	RefSeq	gene	1795	2628	.	+	.	ID=gene-C9E94_RS10865;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=C9E94_RS10865;old_locus_tag=C9E94_11095
NZ_PYJR01000083.1	Protein Homology	CDS	1795	2628	.	+	0	ID=cds-WP_001137620.1;Parent=gene-C9E94_RS10865;Dbxref=GenBank:WP_001137620.1;Name=WP_001137620.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460110.1;locus_tag=C9E94_RS10865;product=curli production assembly/transport protein CsgG;protein_id=WP_001137620.1;transl_table=11
NZ_PYJR01000083.1	RefSeq	gene	2667	3149	.	-	.	ID=gene-C9E94_RS10870;Name=C9E94_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10870;old_locus_tag=C9E94_11100
NZ_PYJR01000083.1	Protein Homology	CDS	2667	3149	.	-	0	ID=cds-WP_001670718.1;Parent=gene-C9E94_RS10870;Dbxref=GenBank:WP_001670718.1;Name=WP_001670718.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675581.1;locus_tag=C9E94_RS10870;product=DUF1097 domain-containing protein;protein_id=WP_001670718.1;transl_table=11
NZ_PYJR01000083.1	RefSeq	gene	3250	3804	.	-	.	ID=gene-C9E94_RS10875;Name=C9E94_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10875;old_locus_tag=C9E94_11105
NZ_PYJR01000083.1	Protein Homology	CDS	3250	3804	.	-	0	ID=cds-WP_001001883.1;Parent=gene-C9E94_RS10875;Dbxref=GenBank:WP_001001883.1;Name=WP_001001883.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460108.1;locus_tag=C9E94_RS10875;product=TorD/DmsD family molecular chaperone;protein_id=WP_001001883.1;transl_table=11
NZ_PYJR01000083.1	RefSeq	gene	3828	4565	.	-	.	ID=gene-C9E94_RS10880;Name=C9E94_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10880;old_locus_tag=C9E94_11110
NZ_PYJR01000083.1	Protein Homology	CDS	3828	4565	.	-	0	ID=cds-WP_023193537.1;Parent=gene-C9E94_RS10880;Dbxref=GenBank:WP_023193537.1;Name=WP_023193537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460107.1;locus_tag=C9E94_RS10880;product=phosphatase;protein_id=WP_023193537.1;transl_table=11
NZ_PYJR01000083.1	RefSeq	gene	4650	5588	.	-	.	ID=gene-C9E94_RS10885;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=C9E94_RS10885;old_locus_tag=C9E94_11115
NZ_PYJR01000083.1	Protein Homology	CDS	4650	5588	.	-	0	ID=cds-WP_135401016.1;Parent=gene-C9E94_RS10885;Dbxref=GenBank:WP_135401016.1;Name=WP_135401016.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460106.1;locus_tag=C9E94_RS10885;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_135401016.1;transl_table=11
NZ_PYJR01000083.1	RefSeq	gene	5824	5911	.	+	.	ID=gene-C9E94_RS10895;Name=C9E94_RS10895;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS10895;old_locus_tag=C9E94_11125
NZ_PYJR01000083.1	tRNAscan-SE	tRNA	5824	5911	.	+	.	ID=rna-C9E94_RS10895;Parent=gene-C9E94_RS10895;anticodon=(pos:5858..5860);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS10895;product=tRNA-Ser
NZ_PYJR01000083.1	tRNAscan-SE	exon	5824	5911	.	+	.	ID=exon-C9E94_RS10895-1;Parent=rna-C9E94_RS10895;anticodon=(pos:5858..5860);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS10895;product=tRNA-Ser
NZ_PYJR01000083.1	RefSeq	gene	6062	7168	.	-	.	ID=gene-C9E94_RS10900;Name=C9E94_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10900;old_locus_tag=C9E94_11130
NZ_PYJR01000083.1	Protein Homology	CDS	6062	7168	.	-	0	ID=cds-WP_000988589.1;Parent=gene-C9E94_RS10900;Dbxref=GenBank:WP_000988589.1;Name=WP_000988589.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460105.1;locus_tag=C9E94_RS10900;product=Gfo/Idh/MocA family protein;protein_id=WP_000988589.1;transl_table=11
NZ_PYJR01000083.1	RefSeq	gene	7179	8459	.	-	.	ID=gene-C9E94_RS10905;Name=C9E94_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10905;old_locus_tag=C9E94_11135
NZ_PYJR01000083.1	Protein Homology	CDS	7179	8459	.	-	0	ID=cds-WP_000560758.1;Parent=gene-C9E94_RS10905;Dbxref=GenBank:WP_000560758.1;Name=WP_000560758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460104.1;locus_tag=C9E94_RS10905;product=MFS transporter;protein_id=WP_000560758.1;transl_table=11
NZ_PYJR01000083.1	RefSeq	gene	8742	9434	.	-	.	ID=gene-C9E94_RS10910;Name=C9E94_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10910;old_locus_tag=C9E94_11140
NZ_PYJR01000083.1	Protein Homology	CDS	8742	9434	.	-	0	ID=cds-WP_000700610.1;Parent=gene-C9E94_RS10910;Dbxref=GenBank:WP_000700610.1;Name=WP_000700610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460103.1;locus_tag=C9E94_RS10910;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_000700610.1;transl_table=11
##sequence-region NZ_PYJR01000003.1 1 8635
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000003.1	RefSeq	region	1	8635	.	+	.	ID=NZ_PYJR01000003.1:1..8635;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000003.1	RefSeq	gene	210	977	.	+	.	ID=gene-C9E94_RS00060;Name=C9E94_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS00060;old_locus_tag=C9E94_00060
NZ_PYJR01000003.1	Protein Homology	CDS	210	977	.	+	0	ID=cds-WP_135400721.1;Parent=gene-C9E94_RS00060;Dbxref=GenBank:WP_135400721.1;Name=WP_135400721.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462128.1;locus_tag=C9E94_RS00060;product=siderophore-interacting protein;protein_id=WP_135400721.1;transl_table=11
NZ_PYJR01000003.1	RefSeq	gene	1057	1132	.	-	.	ID=gene-C9E94_RS00065;Name=C9E94_RS00065;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS00065;old_locus_tag=C9E94_00065
NZ_PYJR01000003.1	tRNAscan-SE	tRNA	1057	1132	.	-	.	ID=rna-C9E94_RS00065;Parent=gene-C9E94_RS00065;anticodon=(pos:complement(1097..1099));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS00065;product=tRNA-Ile
NZ_PYJR01000003.1	tRNAscan-SE	exon	1057	1132	.	-	.	ID=exon-C9E94_RS00065-1;Parent=rna-C9E94_RS00065;anticodon=(pos:complement(1097..1099));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS00065;product=tRNA-Ile
NZ_PYJR01000003.1	RefSeq	gene	1258	1764	.	+	.	ID=gene-C9E94_RS00070;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=C9E94_RS00070;old_locus_tag=C9E94_00070
NZ_PYJR01000003.1	Protein Homology	CDS	1258	1764	.	+	0	ID=cds-WP_000237776.1;Parent=gene-C9E94_RS00070;Dbxref=GenBank:WP_000237776.1;Name=WP_000237776.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462127.1;locus_tag=C9E94_RS00070;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_000237776.1;transl_table=11
NZ_PYJR01000003.1	RefSeq	gene	1888	3870	.	-	.	ID=gene-C9E94_RS00075;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=C9E94_RS00075;old_locus_tag=C9E94_00075
NZ_PYJR01000003.1	Protein Homology	CDS	1888	3870	.	-	0	ID=cds-WP_001120159.1;Parent=gene-C9E94_RS00075;Dbxref=GenBank:WP_001120159.1;Name=WP_001120159.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF004208.0;locus_tag=C9E94_RS00075;product=RNA polymerase sigma factor RpoD;protein_id=WP_001120159.1;transl_table=11
NZ_PYJR01000003.1	RefSeq	gene	3885	5630	.	-	.	ID=gene-C9E94_RS00080;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=C9E94_RS00080;old_locus_tag=C9E94_00080
NZ_PYJR01000003.1	Protein Homology	CDS	3885	5630	.	-	0	ID=cds-WP_000918865.1;Parent=gene-C9E94_RS00080;Dbxref=GenBank:WP_000918865.1;Name=WP_000918865.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462125.1;locus_tag=C9E94_RS00080;product=DNA primase;protein_id=WP_000918865.1;transl_table=11
NZ_PYJR01000003.1	RefSeq	gene	5866	6081	.	-	.	ID=gene-C9E94_RS00085;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=C9E94_RS00085;old_locus_tag=C9E94_00085
NZ_PYJR01000003.1	Protein Homology	CDS	5866	6081	.	-	0	ID=cds-WP_001144069.1;Parent=gene-C9E94_RS00085;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=C9E94_RS00085;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11
NZ_PYJR01000003.1	RefSeq	gene	6309	7322	.	+	.	ID=gene-C9E94_RS00090;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=C9E94_RS00090;old_locus_tag=C9E94_00090
NZ_PYJR01000003.1	Protein Homology	CDS	6309	7322	.	+	0	ID=cds-WP_001264394.1;Parent=gene-C9E94_RS00090;Dbxref=GenBank:WP_001264394.1;Name=WP_001264394.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=C9E94_RS00090;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_001264394.1;transl_table=11
NZ_PYJR01000003.1	RefSeq	pseudogene	7445	7588	.	-	.	ID=gene-C9E94_RS23320;Name=C9E94_RS23320;end_range=7588,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23320;partial=true;pseudo=true;start_range=.,7445
NZ_PYJR01000003.1	Protein Homology	CDS	7445	7588	.	-	0	ID=cds-C9E94_RS23320;Parent=gene-C9E94_RS23320;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016829;end_range=7588,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311971.1;locus_tag=C9E94_RS23320;partial=true;product=fumarate hydratase;pseudo=true;start_range=.,7445;transl_table=11
NZ_PYJR01000003.1	RefSeq	gene	7572	8183	.	-	.	ID=gene-C9E94_RS00100;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=C9E94_RS00100;old_locus_tag=C9E94_00100
NZ_PYJR01000003.1	Protein Homology	CDS	7572	8183	.	-	0	ID=cds-WP_135400722.1;Parent=gene-C9E94_RS00100;Dbxref=GenBank:WP_135400722.1;Name=WP_135400722.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462122.1;locus_tag=C9E94_RS00100;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_135400722.1;transl_table=11
NZ_PYJR01000003.1	RefSeq	gene	8290	8635	.	+	.	ID=gene-C9E94_RS00105;Name=folB;end_range=8635,.;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=C9E94_RS00105;old_locus_tag=C9E94_00105;partial=true
NZ_PYJR01000003.1	Protein Homology	CDS	8290	8635	.	+	0	ID=cds-WP_097168111.1;Parent=gene-C9E94_RS00105;Dbxref=GenBank:WP_097168111.1;Name=WP_097168111.1;Ontology_term=GO:0006760,GO:0004150;end_range=8635,.;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708868.2;locus_tag=C9E94_RS00105;partial=true;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_097168111.1;transl_table=11
##sequence-region NZ_PYJR01000055.1 1 8619
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000055.1	RefSeq	region	1	8619	.	+	.	ID=NZ_PYJR01000055.1:1..8619;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000055.1	RefSeq	gene	1	225	.	-	.	ID=gene-C9E94_RS07335;Name=C9E94_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07335;old_locus_tag=C9E94_07510;partial=true;start_range=.,1
NZ_PYJR01000055.1	Protein Homology	CDS	1	225	.	-	0	ID=cds-WP_135400903.1;Parent=gene-C9E94_RS07335;Dbxref=GenBank:WP_135400903.1;Name=WP_135400903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459061.1;locus_tag=C9E94_RS07335;partial=true;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_135400903.1;start_range=.,1;transl_table=11
NZ_PYJR01000055.1	RefSeq	gene	384	1724	.	-	.	ID=gene-C9E94_RS07340;Name=citS;gbkey=Gene;gene=citS;gene_biotype=protein_coding;locus_tag=C9E94_RS07340;old_locus_tag=C9E94_07515
NZ_PYJR01000055.1	Protein Homology	CDS	384	1724	.	-	0	ID=cds-WP_000183602.1;Parent=gene-C9E94_RS07340;Dbxref=GenBank:WP_000183602.1;Name=WP_000183602.1;Ontology_term=GO:0006101,GO:0006814,GO:0008514,GO:0015293;gbkey=CDS;gene=citS;go_function=organic anion transmembrane transporter activity|0008514||IEA,symporter activity|0015293||IEA;go_process=citrate metabolic process|0006101||IEA,sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459062.1;locus_tag=C9E94_RS07340;product=citrate/sodium symporter CitS;protein_id=WP_000183602.1;transl_table=11
NZ_PYJR01000055.1	RefSeq	gene	1969	3012	.	+	.	ID=gene-C9E94_RS07345;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=C9E94_RS07345;old_locus_tag=C9E94_07520
NZ_PYJR01000055.1	Protein Homology	CDS	1969	3012	.	+	0	ID=cds-WP_072095630.1;Parent=gene-C9E94_RS07345;Dbxref=GenBank:WP_072095630.1;Name=WP_072095630.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459063.1;locus_tag=C9E94_RS07345;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_072095630.1;transl_table=11
NZ_PYJR01000055.1	RefSeq	gene	3042	3335	.	+	.	ID=gene-C9E94_RS07350;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=C9E94_RS07350;old_locus_tag=C9E94_07525
NZ_PYJR01000055.1	Protein Homology	CDS	3042	3335	.	+	0	ID=cds-WP_000691461.1;Parent=gene-C9E94_RS07350;Dbxref=GenBank:WP_000691461.1;Name=WP_000691461.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459064.1;locus_tag=C9E94_RS07350;product=citrate lyase acyl carrier protein;protein_id=WP_000691461.1;transl_table=11
NZ_PYJR01000055.1	RefSeq	gene	3332	4201	.	+	.	ID=gene-C9E94_RS07355;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=C9E94_RS07355;old_locus_tag=C9E94_07530
NZ_PYJR01000055.1	Protein Homology	CDS	3332	4201	.	+	0	ID=cds-WP_001247801.1;Parent=gene-C9E94_RS07355;Dbxref=GenBank:WP_001247801.1;Name=WP_001247801.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459065.1;locus_tag=C9E94_RS07355;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_001247801.1;transl_table=11
NZ_PYJR01000055.1	RefSeq	gene	4212	5732	.	+	.	ID=gene-C9E94_RS07360;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=C9E94_RS07360;old_locus_tag=C9E94_07535
NZ_PYJR01000055.1	Protein Homology	CDS	4212	5732	.	+	0	ID=cds-WP_000665574.1;Parent=gene-C9E94_RS07360;Dbxref=GenBank:WP_000665574.1;Name=WP_000665574.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459066.1;locus_tag=C9E94_RS07360;product=citrate lyase subunit alpha;protein_id=WP_000665574.1;transl_table=11
NZ_PYJR01000055.1	RefSeq	gene	5732	6283	.	+	.	ID=gene-C9E94_RS07365;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=C9E94_RS07365;old_locus_tag=C9E94_07540
NZ_PYJR01000055.1	Protein Homology	CDS	5732	6283	.	+	0	ID=cds-WP_135400904.1;Parent=gene-C9E94_RS07365;Dbxref=GenBank:WP_135400904.1;Name=WP_135400904.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459067.1;locus_tag=C9E94_RS07365;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_135400904.1;transl_table=11
NZ_PYJR01000055.1	RefSeq	gene	6261	7169	.	+	.	ID=gene-C9E94_RS07370;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=C9E94_RS07370;old_locus_tag=C9E94_07545
NZ_PYJR01000055.1	Protein Homology	CDS	6261	7169	.	+	0	ID=cds-WP_000117014.1;Parent=gene-C9E94_RS07370;Dbxref=GenBank:WP_000117014.1;Name=WP_000117014.1;Ontology_term=GO:0016310,GO:0019361,GO:0005524,GO:0046917;gbkey=CDS;gene=citG;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA,2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|0019361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459068.1;locus_tag=C9E94_RS07370;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_000117014.1;transl_table=11
NZ_PYJR01000055.1	RefSeq	gene	7349	8170	.	+	.	ID=gene-C9E94_RS07375;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=C9E94_RS07375;old_locus_tag=C9E94_07550
NZ_PYJR01000055.1	Protein Homology	CDS	7349	8170	.	+	0	ID=cds-WP_000544031.1;Parent=gene-C9E94_RS07375;Dbxref=GenBank:WP_000544031.1;Name=WP_000544031.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459069.1;locus_tag=C9E94_RS07375;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_000544031.1;transl_table=11
##sequence-region NZ_PYJR01000034.1 1 112688
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000034.1	RefSeq	region	1	112688	.	+	.	ID=NZ_PYJR01000034.1:1..112688;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000034.1	RefSeq	gene	2	76	.	+	.	ID=gene-C9E94_RS03325;Name=C9E94_RS03325;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS03325;old_locus_tag=C9E94_03400
NZ_PYJR01000034.1	tRNAscan-SE	tRNA	2	76	.	+	.	ID=rna-C9E94_RS03325;Parent=gene-C9E94_RS03325;anticodon=(pos:34..36);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS03325;product=tRNA-Gln
NZ_PYJR01000034.1	tRNAscan-SE	exon	2	76	.	+	.	ID=exon-C9E94_RS03325-1;Parent=rna-C9E94_RS03325;anticodon=(pos:34..36);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS03325;product=tRNA-Gln
NZ_PYJR01000034.1	RefSeq	gene	120	194	.	+	.	ID=gene-C9E94_RS03330;Name=C9E94_RS03330;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS03330;old_locus_tag=C9E94_03405
NZ_PYJR01000034.1	tRNAscan-SE	tRNA	120	194	.	+	.	ID=rna-C9E94_RS03330;Parent=gene-C9E94_RS03330;anticodon=(pos:152..154);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS03330;product=tRNA-Gln
NZ_PYJR01000034.1	tRNAscan-SE	exon	120	194	.	+	.	ID=exon-C9E94_RS03330-1;Parent=rna-C9E94_RS03330;anticodon=(pos:152..154);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS03330;product=tRNA-Gln
NZ_PYJR01000034.1	RefSeq	gene	330	905	.	+	.	ID=gene-C9E94_RS03335;Name=C9E94_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03335;old_locus_tag=C9E94_03410
NZ_PYJR01000034.1	Protein Homology	CDS	330	905	.	+	0	ID=cds-WP_001109082.1;Parent=gene-C9E94_RS03335;Dbxref=GenBank:WP_001109082.1;Name=WP_001109082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459664.1;locus_tag=C9E94_RS03335;product=membrane protein;protein_id=WP_001109082.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	972	2147	.	-	.	ID=gene-C9E94_RS03340;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=C9E94_RS03340;old_locus_tag=C9E94_03415
NZ_PYJR01000034.1	Protein Homology	CDS	972	2147	.	-	0	ID=cds-WP_000184625.1;Parent=gene-C9E94_RS03340;Dbxref=GenBank:WP_000184625.1;Name=WP_000184625.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459663.1;locus_tag=C9E94_RS03340;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_000184625.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	2291	3715	.	+	.	ID=gene-C9E94_RS03345;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=C9E94_RS03345;old_locus_tag=C9E94_03420
NZ_PYJR01000034.1	Protein Homology	CDS	2291	3715	.	+	0	ID=cds-WP_001519200.1;Parent=gene-C9E94_RS03345;Dbxref=GenBank:WP_001519200.1;Name=WP_001519200.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=C9E94_RS03345;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_001519200.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	3920	4966	.	+	.	ID=gene-C9E94_RS03350;Name=C9E94_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03350;old_locus_tag=C9E94_03425
NZ_PYJR01000034.1	Protein Homology	CDS	3920	4966	.	+	0	ID=cds-WP_167853640.1;Parent=gene-C9E94_RS03350;Dbxref=GenBank:WP_167853640.1;Name=WP_167853640.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225825.1;locus_tag=C9E94_RS03350;product=PhoH family protein;protein_id=WP_167853640.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	4963	5436	.	+	.	ID=gene-C9E94_RS03355;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=C9E94_RS03355;old_locus_tag=C9E94_03430
NZ_PYJR01000034.1	Protein Homology	CDS	4963	5436	.	+	0	ID=cds-WP_000084477.1;Parent=gene-C9E94_RS03355;Dbxref=GenBank:WP_000084477.1;Name=WP_000084477.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459660.1;locus_tag=C9E94_RS03355;product=rRNA maturation RNase YbeY;protein_id=WP_000084477.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	5594	6472	.	+	.	ID=gene-C9E94_RS03360;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=C9E94_RS03360;old_locus_tag=C9E94_03435
NZ_PYJR01000034.1	Protein Homology	CDS	5594	6472	.	+	0	ID=cds-WP_001278615.1;Parent=gene-C9E94_RS03360;Dbxref=GenBank:WP_001278615.1;Name=WP_001278615.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459659.1;locus_tag=C9E94_RS03360;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_001278615.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	6492	8030	.	+	.	ID=gene-C9E94_RS03365;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=C9E94_RS03365;old_locus_tag=C9E94_03440
NZ_PYJR01000034.1	Protein Homology	CDS	6492	8030	.	+	0	ID=cds-WP_023239021.1;Parent=gene-C9E94_RS03365;Dbxref=GenBank:WP_023239021.1;Name=WP_023239021.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459658.1;locus_tag=C9E94_RS03365;product=apolipoprotein N-acyltransferase;protein_id=WP_023239021.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	8385	9293	.	+	.	ID=gene-C9E94_RS03370;Name=C9E94_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03370;old_locus_tag=C9E94_03445
NZ_PYJR01000034.1	Protein Homology	CDS	8385	9293	.	+	0	ID=cds-WP_001518176.1;Parent=gene-C9E94_RS03370;Dbxref=GenBank:WP_001518176.1;Name=WP_001518176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=C9E94_RS03370;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_001518176.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	9453	10193	.	+	.	ID=gene-C9E94_RS03375;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=C9E94_RS03375;old_locus_tag=C9E94_03450
NZ_PYJR01000034.1	Protein Homology	CDS	9453	10193	.	+	0	ID=cds-WP_000020930.1;Parent=gene-C9E94_RS03375;Dbxref=GenBank:WP_000020930.1;Name=WP_000020930.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459656.1;locus_tag=C9E94_RS03375;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_000020930.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	10193	10867	.	+	.	ID=gene-C9E94_RS03380;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=C9E94_RS03380;old_locus_tag=C9E94_03455
NZ_PYJR01000034.1	Protein Homology	CDS	10193	10867	.	+	0	ID=cds-WP_000272799.1;Parent=gene-C9E94_RS03380;Dbxref=GenBank:WP_000272799.1;Name=WP_000272799.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459655.1;locus_tag=C9E94_RS03380;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_000272799.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	10867	11592	.	+	.	ID=gene-C9E94_RS03385;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=C9E94_RS03385;old_locus_tag=C9E94_03460
NZ_PYJR01000034.1	Protein Homology	CDS	10867	11592	.	+	0	ID=cds-WP_000631369.1;Parent=gene-C9E94_RS03385;Dbxref=GenBank:WP_000631369.1;Name=WP_000631369.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=C9E94_RS03385;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WP_000631369.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	11709	12644	.	+	.	ID=gene-C9E94_RS03390;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=C9E94_RS03390;old_locus_tag=C9E94_03465
NZ_PYJR01000034.1	Protein Homology	CDS	11709	12644	.	+	0	ID=cds-WP_001207430.1;Parent=gene-C9E94_RS03390;Dbxref=GenBank:WP_001207430.1;Name=WP_001207430.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459653.1;locus_tag=C9E94_RS03390;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_001207430.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	12676	13914	.	+	.	ID=gene-C9E94_RS03395;Name=C9E94_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03395;old_locus_tag=C9E94_03470
NZ_PYJR01000034.1	Protein Homology	CDS	12676	13914	.	+	0	ID=cds-WP_135400808.1;Parent=gene-C9E94_RS03395;Dbxref=GenBank:WP_135400808.1;Name=WP_135400808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459652.1;locus_tag=C9E94_RS03395;product=hypothetical protein;protein_id=WP_135400808.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	13990	15669	.	+	.	ID=gene-C9E94_RS03400;Name=hscC;gbkey=Gene;gene=hscC;gene_biotype=protein_coding;locus_tag=C9E94_RS03400;old_locus_tag=C9E94_03475
NZ_PYJR01000034.1	Protein Homology	CDS	13990	15669	.	+	0	ID=cds-WP_000368034.1;Parent=gene-C9E94_RS03400;Dbxref=GenBank:WP_000368034.1;Name=WP_000368034.1;gbkey=CDS;gene=hscC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459651.1;locus_tag=C9E94_RS03400;product=molecular chaperone HscC;protein_id=WP_000368034.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	15691	17154	.	-	.	ID=gene-C9E94_RS03405;Name=C9E94_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03405;old_locus_tag=C9E94_03480
NZ_PYJR01000034.1	Protein Homology	CDS	15691	17154	.	-	0	ID=cds-WP_135400809.1;Parent=gene-C9E94_RS03405;Dbxref=GenBank:WP_135400809.1;Name=WP_135400809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459650.1;locus_tag=C9E94_RS03405;product=J domain-containing protein;protein_id=WP_135400809.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	17151	17846	.	-	.	ID=gene-C9E94_RS03410;Name=C9E94_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03410;old_locus_tag=C9E94_03485
NZ_PYJR01000034.1	Protein Homology	CDS	17151	17846	.	-	0	ID=cds-WP_001662252.1;Parent=gene-C9E94_RS03410;Dbxref=GenBank:WP_001662252.1;Name=WP_001662252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459649.1;locus_tag=C9E94_RS03410;product=DUF1266 domain-containing protein;protein_id=WP_001662252.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	17858	19291	.	-	.	ID=gene-C9E94_RS03415;Name=C9E94_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03415;old_locus_tag=C9E94_03490
NZ_PYJR01000034.1	Protein Homology	CDS	17858	19291	.	-	0	ID=cds-WP_135400810.1;Parent=gene-C9E94_RS03415;Dbxref=GenBank:WP_135400810.1;Name=WP_135400810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459648.1;locus_tag=C9E94_RS03415;product=J domain-containing protein;protein_id=WP_135400810.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	19288	19995	.	-	.	ID=gene-C9E94_RS03420;Name=C9E94_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03420;old_locus_tag=C9E94_03495
NZ_PYJR01000034.1	Protein Homology	CDS	19288	19995	.	-	0	ID=cds-WP_135400811.1;Parent=gene-C9E94_RS03420;Dbxref=GenBank:WP_135400811.1;Name=WP_135400811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459647.1;locus_tag=C9E94_RS03420;product=DUF1266 domain-containing protein;protein_id=WP_135400811.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	20120	21115	.	+	.	ID=gene-C9E94_RS03425;Name=C9E94_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03425;old_locus_tag=C9E94_03500
NZ_PYJR01000034.1	Protein Homology	CDS	20120	21115	.	+	0	ID=cds-WP_135400812.1;Parent=gene-C9E94_RS03425;Dbxref=GenBank:WP_135400812.1;Name=WP_135400812.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459646.1;locus_tag=C9E94_RS03425;product=tetratricopeptide repeat protein;protein_id=WP_135400812.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	21154	21627	.	-	.	ID=gene-C9E94_RS03430;Name=C9E94_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03430;old_locus_tag=C9E94_03505
NZ_PYJR01000034.1	Protein Homology	CDS	21154	21627	.	-	0	ID=cds-WP_001044885.1;Parent=gene-C9E94_RS03430;Dbxref=GenBank:WP_001044885.1;Name=WP_001044885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=C9E94_RS03430;product=zinc ribbon-containing protein;protein_id=WP_001044885.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	21720	23648	.	-	.	ID=gene-C9E94_RS03435;Name=C9E94_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03435;old_locus_tag=C9E94_03510
NZ_PYJR01000034.1	Protein Homology	CDS	21720	23648	.	-	0	ID=cds-WP_017441664.1;Parent=gene-C9E94_RS03435;Dbxref=GenBank:WP_017441664.1;Name=WP_017441664.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459644.1;locus_tag=C9E94_RS03435;product=sigma-54 interaction domain-containing protein;protein_id=WP_017441664.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	23716	24669	.	-	.	ID=gene-C9E94_RS03440;Name=C9E94_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03440;old_locus_tag=C9E94_03515
NZ_PYJR01000034.1	Protein Homology	CDS	23716	24669	.	-	0	ID=cds-WP_000694477.1;Parent=gene-C9E94_RS03440;Dbxref=GenBank:WP_000694477.1;Name=WP_000694477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459643.1;locus_tag=C9E94_RS03440;product=2-keto-3-deoxygluconate permease;protein_id=WP_000694477.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	24719	25891	.	-	.	ID=gene-C9E94_RS03445;Name=C9E94_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03445;old_locus_tag=C9E94_03520
NZ_PYJR01000034.1	Protein Homology	CDS	24719	25891	.	-	0	ID=cds-WP_001670689.1;Parent=gene-C9E94_RS03445;Dbxref=GenBank:WP_001670689.1;Name=WP_001670689.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447101.1;locus_tag=C9E94_RS03445;product=UxaA family hydrolase;protein_id=WP_001670689.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	25908	26249	.	-	.	ID=gene-C9E94_RS03450;Name=C9E94_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03450;old_locus_tag=C9E94_03525
NZ_PYJR01000034.1	Protein Homology	CDS	25908	26249	.	-	0	ID=cds-WP_001574029.1;Parent=gene-C9E94_RS03450;Dbxref=GenBank:WP_001574029.1;Name=WP_001574029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447100.1;locus_tag=C9E94_RS03450;product=UxaA family hydrolase;protein_id=WP_001574029.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	26486	29068	.	+	.	ID=gene-C9E94_RS03455;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=C9E94_RS03455;old_locus_tag=C9E94_03530
NZ_PYJR01000034.1	Protein Homology	CDS	26486	29068	.	+	0	ID=cds-WP_001157916.1;Parent=gene-C9E94_RS03455;Dbxref=GenBank:WP_001157916.1;Name=WP_001157916.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=C9E94_RS03455;product=leucine--tRNA ligase;protein_id=WP_001157916.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	29083	29673	.	+	.	ID=gene-C9E94_RS03460;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=C9E94_RS03460;old_locus_tag=C9E94_03535
NZ_PYJR01000034.1	Protein Homology	CDS	29083	29673	.	+	0	ID=cds-WP_001269950.1;Parent=gene-C9E94_RS03460;Dbxref=GenBank:WP_001269950.1;Name=WP_001269950.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459639.1;locus_tag=C9E94_RS03460;product=LPS assembly lipoprotein LptE;protein_id=WP_001269950.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	29673	30704	.	+	.	ID=gene-C9E94_RS03465;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=C9E94_RS03465;old_locus_tag=C9E94_03540
NZ_PYJR01000034.1	Protein Homology	CDS	29673	30704	.	+	0	ID=cds-WP_000620491.1;Parent=gene-C9E94_RS03465;Dbxref=GenBank:WP_000620491.1;Name=WP_000620491.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459638.1;locus_tag=C9E94_RS03465;product=DNA polymerase III subunit delta;protein_id=WP_000620491.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	30706	31347	.	+	.	ID=gene-C9E94_RS03470;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=C9E94_RS03470;old_locus_tag=C9E94_03545
NZ_PYJR01000034.1	Protein Homology	CDS	30706	31347	.	+	0	ID=cds-WP_001518902.1;Parent=gene-C9E94_RS03470;Dbxref=GenBank:WP_001518902.1;Name=WP_001518902.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459637.1;locus_tag=C9E94_RS03470;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_001518902.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	31322	32416	.	-	.	ID=gene-C9E94_RS03475;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=C9E94_RS03475;old_locus_tag=C9E94_03550
NZ_PYJR01000034.1	Protein Homology	CDS	31322	32416	.	-	0	ID=cds-WP_135400813.1;Parent=gene-C9E94_RS03475;Dbxref=GenBank:WP_135400813.1;Name=WP_135400813.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;gene=cobD;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459636.1;locus_tag=C9E94_RS03475;product=threonine-phosphate decarboxylase CobD;protein_id=WP_135400813.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	32513	33121	.	+	.	ID=gene-C9E94_RS03480;Name=C9E94_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03480;old_locus_tag=C9E94_03555
NZ_PYJR01000034.1	Protein Homology	CDS	32513	33121	.	+	0	ID=cds-WP_001523290.1;Parent=gene-C9E94_RS03480;Dbxref=GenBank:WP_001523290.1;Name=WP_001523290.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459635.1;locus_tag=C9E94_RS03480;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_001523290.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	33450	33767	.	+	.	ID=gene-C9E94_RS03485;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=C9E94_RS03485;old_locus_tag=C9E94_03560
NZ_PYJR01000034.1	Protein Homology	CDS	33450	33767	.	+	0	ID=cds-WP_001161670.1;Parent=gene-C9E94_RS03485;Dbxref=GenBank:WP_001161670.1;Name=WP_001161670.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=C9E94_RS03485;product=ribosome silencing factor;protein_id=WP_001161670.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	33771	34238	.	+	.	ID=gene-C9E94_RS03490;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=C9E94_RS03490;old_locus_tag=C9E94_03565
NZ_PYJR01000034.1	Protein Homology	CDS	33771	34238	.	+	0	ID=cds-WP_000776107.1;Parent=gene-C9E94_RS03490;Dbxref=GenBank:WP_000776107.1;Name=WP_000776107.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=C9E94_RS03490;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_000776107.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	34269	36170	.	+	.	ID=gene-C9E94_RS03495;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=C9E94_RS03495;old_locus_tag=C9E94_03570
NZ_PYJR01000034.1	Protein Homology	CDS	34269	36170	.	+	0	ID=cds-WP_000828700.1;Parent=gene-C9E94_RS03495;Dbxref=GenBank:WP_000828700.1;Name=WP_000828700.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459632.1;locus_tag=C9E94_RS03495;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_000828700.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	36173	37285	.	+	.	ID=gene-C9E94_RS03500;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=C9E94_RS03500;old_locus_tag=C9E94_03575
NZ_PYJR01000034.1	Protein Homology	CDS	36173	37285	.	+	0	ID=cds-WP_000131713.1;Parent=gene-C9E94_RS03500;Dbxref=GenBank:WP_000131713.1;Name=WP_000131713.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=C9E94_RS03500;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_000131713.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	37296	38429	.	+	.	ID=gene-C9E94_RS03505;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=C9E94_RS03505;old_locus_tag=C9E94_03580
NZ_PYJR01000034.1	Protein Homology	CDS	37296	38429	.	+	0	ID=cds-WP_080189594.1;Parent=gene-C9E94_RS03505;Dbxref=GenBank:WP_080189594.1;Name=WP_080189594.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459630.1;locus_tag=C9E94_RS03505;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_080189594.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	38569	39780	.	+	.	ID=gene-C9E94_RS03510;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=C9E94_RS03510;old_locus_tag=C9E94_03585
NZ_PYJR01000034.1	Protein Homology	CDS	38569	39780	.	+	0	ID=cds-WP_000858711.1;Parent=gene-C9E94_RS03510;Dbxref=GenBank:WP_000858711.1;Name=WP_000858711.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459629.1;locus_tag=C9E94_RS03510;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_000858711.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	39888	40151	.	+	.	ID=gene-C9E94_RS03515;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=C9E94_RS03515;old_locus_tag=C9E94_03590
NZ_PYJR01000034.1	Protein Homology	CDS	39888	40151	.	+	0	ID=cds-WP_001749279.1;Parent=gene-C9E94_RS03515;Dbxref=GenBank:WP_001749279.1;Name=WP_001749279.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=C9E94_RS03515;product=DUF493 family protein YbeD;protein_id=WP_001749279.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	40251	40892	.	+	.	ID=gene-C9E94_RS03520;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=C9E94_RS03520;old_locus_tag=C9E94_03595
NZ_PYJR01000034.1	Protein Homology	CDS	40251	40892	.	+	0	ID=cds-WP_000284009.1;Parent=gene-C9E94_RS03520;Dbxref=GenBank:WP_000284009.1;Name=WP_000284009.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=C9E94_RS03520;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_000284009.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	41194	42147	.	+	.	ID=gene-C9E94_RS03525;Name=C9E94_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03525;old_locus_tag=C9E94_03600
NZ_PYJR01000034.1	Protein Homology	CDS	41194	42147	.	+	0	ID=cds-WP_017465570.1;Parent=gene-C9E94_RS03525;Dbxref=GenBank:WP_017465570.1;Name=WP_017465570.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459626.1;locus_tag=C9E94_RS03525;product=YbeF family transcriptional regulator;protein_id=WP_017465570.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	42353	43318	.	+	.	ID=gene-C9E94_RS03530;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=C9E94_RS03530;old_locus_tag=C9E94_03605
NZ_PYJR01000034.1	Protein Homology	CDS	42353	43318	.	+	0	ID=cds-WP_000042640.1;Parent=gene-C9E94_RS03530;Dbxref=GenBank:WP_000042640.1;Name=WP_000042640.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=C9E94_RS03530;product=lipoyl synthase;protein_id=WP_000042640.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	43404	43607	.	-	.	ID=gene-C9E94_RS03535;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=C9E94_RS03535;old_locus_tag=C9E94_03610
NZ_PYJR01000034.1	Protein Homology	CDS	43404	43607	.	-	0	ID=cds-WP_000503938.1;Parent=gene-C9E94_RS03535;Dbxref=GenBank:WP_000503938.1;Name=WP_000503938.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459624.1;locus_tag=C9E94_RS03535;product=twin-arginine translocase subunit TatE;protein_id=WP_000503938.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	43736	44524	.	-	.	ID=gene-C9E94_RS03540;Name=C9E94_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03540;old_locus_tag=C9E94_03615
NZ_PYJR01000034.1	Protein Homology	CDS	43736	44524	.	-	0	ID=cds-WP_000495782.1;Parent=gene-C9E94_RS03540;Dbxref=GenBank:WP_000495782.1;Name=WP_000495782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459623.1;locus_tag=C9E94_RS03540;product=deaminated glutathione amidase;protein_id=WP_000495782.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	44615	44998	.	+	.	ID=gene-C9E94_RS03545;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=C9E94_RS03545;old_locus_tag=C9E94_03620
NZ_PYJR01000034.1	Protein Homology	CDS	44615	44998	.	+	0	ID=cds-WP_000939753.1;Parent=gene-C9E94_RS03545;Dbxref=GenBank:WP_000939753.1;Name=WP_000939753.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459622.1;locus_tag=C9E94_RS03545;product=fluoride efflux transporter CrcB;protein_id=WP_000939753.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	45056	45265	.	-	.	ID=gene-C9E94_RS03550;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=C9E94_RS03550;old_locus_tag=C9E94_03625
NZ_PYJR01000034.1	Protein Homology	CDS	45056	45265	.	-	0	ID=cds-WP_000034826.1;Parent=gene-C9E94_RS03550;Dbxref=GenBank:WP_000034826.1;Name=WP_000034826.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459621.1;locus_tag=C9E94_RS03550;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000034826.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	45453	46025	.	-	.	ID=gene-C9E94_RS03555;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=C9E94_RS03555;old_locus_tag=C9E94_03630
NZ_PYJR01000034.1	Protein Homology	CDS	45453	46025	.	-	0	ID=cds-WP_001623090.1;Parent=gene-C9E94_RS03555;Dbxref=GenBank:WP_001623090.1;Name=WP_001623090.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459620.1;locus_tag=C9E94_RS03555;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_001623090.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	46402	47787	.	+	.	ID=gene-C9E94_RS03560;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=C9E94_RS03560;old_locus_tag=C9E94_03635
NZ_PYJR01000034.1	Protein Homology	CDS	46402	47787	.	+	0	ID=cds-WP_023237191.1;Parent=gene-C9E94_RS03560;Dbxref=GenBank:WP_023237191.1;Name=WP_023237191.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459619.1;locus_tag=C9E94_RS03560;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_023237191.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	47841	48521	.	-	.	ID=gene-C9E94_RS03565;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=C9E94_RS03565;old_locus_tag=C9E94_03640
NZ_PYJR01000034.1	Protein Homology	CDS	47841	48521	.	-	0	ID=cds-WP_000138784.1;Parent=gene-C9E94_RS03565;Dbxref=GenBank:WP_000138784.1;Name=WP_000138784.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459618.1;locus_tag=C9E94_RS03565;product=two-component response regulator DpiA;protein_id=WP_000138784.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	48490	50151	.	-	.	ID=gene-C9E94_RS03570;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=C9E94_RS03570;old_locus_tag=C9E94_03645
NZ_PYJR01000034.1	Protein Homology	CDS	48490	50151	.	-	0	ID=cds-WP_135400814.1;Parent=gene-C9E94_RS03570;Dbxref=GenBank:WP_135400814.1;Name=WP_135400814.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459617.1;locus_tag=C9E94_RS03570;product=sensor histidine kinase DpiB;protein_id=WP_135400814.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	50536	51612	.	+	.	ID=gene-C9E94_RS03575;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=C9E94_RS03575;old_locus_tag=C9E94_03650
NZ_PYJR01000034.1	Protein Homology	CDS	50536	51612	.	+	0	ID=cds-WP_000467872.1;Parent=gene-C9E94_RS03575;Dbxref=GenBank:WP_000467872.1;Name=WP_000467872.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459616.1;locus_tag=C9E94_RS03575;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_000467872.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	51609	51905	.	+	.	ID=gene-C9E94_RS03580;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=C9E94_RS03580;old_locus_tag=C9E94_03655
NZ_PYJR01000034.1	Protein Homology	CDS	51609	51905	.	+	0	ID=cds-WP_000700679.1;Parent=gene-C9E94_RS03580;Dbxref=GenBank:WP_000700679.1;Name=WP_000700679.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459615.1;locus_tag=C9E94_RS03580;product=citrate lyase acyl carrier protein;protein_id=WP_000700679.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	51902	52810	.	+	.	ID=gene-C9E94_RS03585;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=C9E94_RS03585;old_locus_tag=C9E94_03660
NZ_PYJR01000034.1	Protein Homology	CDS	51902	52810	.	+	0	ID=cds-WP_000622342.1;Parent=gene-C9E94_RS03585;Dbxref=GenBank:WP_000622342.1;Name=WP_000622342.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459614.1;locus_tag=C9E94_RS03585;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_000622342.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	52820	54349	.	+	.	ID=gene-C9E94_RS03590;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=C9E94_RS03590;old_locus_tag=C9E94_03665
NZ_PYJR01000034.1	Protein Homology	CDS	52820	54349	.	+	0	ID=cds-WP_058679700.1;Parent=gene-C9E94_RS03590;Dbxref=GenBank:WP_058679700.1;Name=WP_058679700.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459613.1;locus_tag=C9E94_RS03590;product=citrate lyase subunit alpha;protein_id=WP_058679700.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	54353	54904	.	+	.	ID=gene-C9E94_RS03595;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=C9E94_RS03595;old_locus_tag=C9E94_03670
NZ_PYJR01000034.1	Protein Homology	CDS	54353	54904	.	+	0	ID=cds-WP_001236062.1;Parent=gene-C9E94_RS03595;Dbxref=GenBank:WP_001236062.1;Name=WP_001236062.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459612.1;locus_tag=C9E94_RS03595;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_001236062.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	54876	55772	.	+	.	ID=gene-C9E94_RS03600;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=C9E94_RS03600;old_locus_tag=C9E94_03675
NZ_PYJR01000034.1	Protein Homology	CDS	54876	55772	.	+	0	ID=cds-WP_000982660.1;Parent=gene-C9E94_RS03600;Dbxref=GenBank:WP_000982660.1;Name=WP_000982660.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459611.1;locus_tag=C9E94_RS03600;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_000982660.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	55810	57273	.	+	.	ID=gene-C9E94_RS03605;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=C9E94_RS03605;old_locus_tag=C9E94_03680
NZ_PYJR01000034.1	Protein Homology	CDS	55810	57273	.	+	0	ID=cds-WP_000059029.1;Parent=gene-C9E94_RS03605;Dbxref=GenBank:WP_000059029.1;Name=WP_000059029.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459610.1;locus_tag=C9E94_RS03605;product=citrate/succinate antiporter CitT;protein_id=WP_000059029.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	57383	58189	.	+	.	ID=gene-C9E94_RS03610;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=C9E94_RS03610;old_locus_tag=C9E94_03685
NZ_PYJR01000034.1	Protein Homology	CDS	57383	58189	.	+	0	ID=cds-WP_135400815.1;Parent=gene-C9E94_RS03610;Dbxref=GenBank:WP_135400815.1;Name=WP_135400815.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459609.1;locus_tag=C9E94_RS03610;product=ribonuclease I;protein_id=WP_135400815.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	58424	58834	.	+	.	ID=gene-C9E94_RS03615;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=C9E94_RS03615;old_locus_tag=C9E94_03695
NZ_PYJR01000034.1	Protein Homology	CDS	58424	58834	.	+	0	ID=cds-WP_000089748.1;Parent=gene-C9E94_RS03615;Dbxref=GenBank:WP_000089748.1;Name=WP_000089748.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459608.1;locus_tag=C9E94_RS03615;product=nucleoside diphosphate kinase regulator;protein_id=WP_000089748.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	58917	60155	.	-	.	ID=gene-C9E94_RS03620;Name=C9E94_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03620;old_locus_tag=C9E94_03700
NZ_PYJR01000034.1	Protein Homology	CDS	58917	60155	.	-	0	ID=cds-WP_000646110.1;Parent=gene-C9E94_RS03620;Dbxref=GenBank:WP_000646110.1;Name=WP_000646110.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459607.1;locus_tag=C9E94_RS03620;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_000646110.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	60378	60806	.	+	.	ID=gene-C9E94_RS03625;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=C9E94_RS03625;old_locus_tag=C9E94_03705
NZ_PYJR01000034.1	Protein Homology	CDS	60378	60806	.	+	0	ID=cds-WP_000278499.1;Parent=gene-C9E94_RS03625;Dbxref=GenBank:WP_000278499.1;Name=WP_000278499.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459606.1;locus_tag=C9E94_RS03625;product=universal stress protein UspG;protein_id=WP_000278499.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	60874	61641	.	-	.	ID=gene-C9E94_RS03630;Name=C9E94_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03630;old_locus_tag=C9E94_03710
NZ_PYJR01000034.1	Protein Homology	CDS	60874	61641	.	-	0	ID=cds-WP_000417096.1;Parent=gene-C9E94_RS03630;Dbxref=GenBank:WP_000417096.1;Name=WP_000417096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459605.1;locus_tag=C9E94_RS03630;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000417096.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	61641	62198	.	-	.	ID=gene-C9E94_RS03635;Name=C9E94_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03635;old_locus_tag=C9E94_03715
NZ_PYJR01000034.1	Protein Homology	CDS	61641	62198	.	-	0	ID=cds-WP_001250381.1;Parent=gene-C9E94_RS03635;Dbxref=GenBank:WP_001250381.1;Name=WP_001250381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459604.1;locus_tag=C9E94_RS03635;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001250381.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	62195	64474	.	-	.	ID=gene-C9E94_RS03640;Name=C9E94_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03640;old_locus_tag=C9E94_03720
NZ_PYJR01000034.1	Protein Homology	CDS	62195	64474	.	-	0	ID=cds-WP_000064308.1;Parent=gene-C9E94_RS03640;Dbxref=GenBank:WP_000064308.1;Name=WP_000064308.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459603.1;locus_tag=C9E94_RS03640;product=molybdopterin-dependent oxidoreductase;protein_id=WP_000064308.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	64467	65027	.	-	.	ID=gene-C9E94_RS03645;Name=C9E94_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03645;old_locus_tag=C9E94_03725
NZ_PYJR01000034.1	Protein Homology	CDS	64467	65027	.	-	0	ID=cds-WP_000377442.1;Parent=gene-C9E94_RS03645;Dbxref=GenBank:WP_000377442.1;Name=WP_000377442.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459602.1;locus_tag=C9E94_RS03645;product=TorD/DmsD family molecular chaperone;protein_id=WP_000377442.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	65360	66925	.	-	.	ID=gene-C9E94_RS03650;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=C9E94_RS03650;old_locus_tag=C9E94_03730
NZ_PYJR01000034.1	Protein Homology	CDS	65360	66925	.	-	0	ID=cds-WP_000887643.1;Parent=gene-C9E94_RS03650;Dbxref=GenBank:WP_000887643.1;Name=WP_000887643.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459601.1;locus_tag=C9E94_RS03650;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000887643.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	67167	67730	.	-	.	ID=gene-C9E94_RS03655;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=C9E94_RS03655;old_locus_tag=C9E94_03735
NZ_PYJR01000034.1	Protein Homology	CDS	67167	67730	.	-	0	ID=cds-WP_000052802.1;Parent=gene-C9E94_RS03655;Dbxref=GenBank:WP_000052802.1;Name=WP_000052802.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=C9E94_RS03655;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052802.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	68171	68917	.	+	.	ID=gene-C9E94_RS03660;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=C9E94_RS03660;old_locus_tag=C9E94_03740
NZ_PYJR01000034.1	Protein Homology	CDS	68171	68917	.	+	0	ID=cds-WP_135400816.1;Parent=gene-C9E94_RS03660;Dbxref=GenBank:WP_135400816.1;Name=WP_135400816.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459599.1;locus_tag=C9E94_RS03660;product=thiol:disulfide interchange protein DsbG;protein_id=WP_135400816.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	69234	70136	.	+	.	ID=gene-C9E94_RS03665;Name=citR;gbkey=Gene;gene=citR;gene_biotype=protein_coding;gene_synonym=ybdO;locus_tag=C9E94_RS03665;old_locus_tag=C9E94_03750
NZ_PYJR01000034.1	Protein Homology	CDS	69234	70136	.	+	0	ID=cds-WP_000002497.1;Parent=gene-C9E94_RS03665;Dbxref=GenBank:WP_000002497.1;Name=WP_000002497.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=citR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459598.1;locus_tag=C9E94_RS03665;product=DNA-binding transcriptional repressor CitR;protein_id=WP_000002497.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	70302	71537	.	+	.	ID=gene-C9E94_RS03670;Name=C9E94_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03670;old_locus_tag=C9E94_03755
NZ_PYJR01000034.1	Protein Homology	CDS	70302	71537	.	+	0	ID=cds-WP_000118137.1;Parent=gene-C9E94_RS03670;Dbxref=GenBank:WP_000118137.1;Name=WP_000118137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459597.1;locus_tag=C9E94_RS03670;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000118137.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	71510	72127	.	+	.	ID=gene-C9E94_RS03675;Name=C9E94_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03675;old_locus_tag=C9E94_03760
NZ_PYJR01000034.1	Protein Homology	CDS	71510	72127	.	+	0	ID=cds-WP_001164756.1;Parent=gene-C9E94_RS03675;Dbxref=GenBank:WP_001164756.1;Name=WP_001164756.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459596.1;locus_tag=C9E94_RS03675;product=IbrB-like domain-containing protein;protein_id=WP_001164756.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	72128	73288	.	-	.	ID=gene-C9E94_RS03680;Name=C9E94_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03680;old_locus_tag=C9E94_03765
NZ_PYJR01000034.1	Protein Homology	CDS	72128	73288	.	-	0	ID=cds-WP_001245604.1;Parent=gene-C9E94_RS03680;Dbxref=GenBank:WP_001245604.1;Name=WP_001245604.1;Ontology_term=GO:0008483,GO:0016740;gbkey=CDS;go_function=transaminase activity|0008483||IEA,transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459595.1;locus_tag=C9E94_RS03680;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_001245604.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	73415	74503	.	+	.	ID=gene-C9E94_RS03685;Name=C9E94_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03685;old_locus_tag=C9E94_03770
NZ_PYJR01000034.1	Protein Homology	CDS	73415	74503	.	+	0	ID=cds-WP_023137878.1;Parent=gene-C9E94_RS03685;Dbxref=GenBank:WP_023137878.1;Name=WP_023137878.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459594.1;locus_tag=C9E94_RS03685;product=oxidoreductase;protein_id=WP_023137878.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	74539	74736	.	-	.	ID=gene-C9E94_RS03690;Name=C9E94_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03690;old_locus_tag=C9E94_03775
NZ_PYJR01000034.1	Protein Homology	CDS	74539	74736	.	-	0	ID=cds-WP_000460619.1;Parent=gene-C9E94_RS03690;Dbxref=GenBank:WP_000460619.1;Name=WP_000460619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=C9E94_RS03690;product=YbdD/YjiX family protein;protein_id=WP_000460619.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	74800	76905	.	-	.	ID=gene-C9E94_RS03695;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=C9E94_RS03695;old_locus_tag=C9E94_03780
NZ_PYJR01000034.1	Protein Homology	CDS	74800	76905	.	-	0	ID=cds-WP_001043108.1;Parent=gene-C9E94_RS03695;Dbxref=GenBank:WP_001043108.1;Name=WP_001043108.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459592.1;locus_tag=C9E94_RS03695;product=pyruvate/proton symporter CstA;protein_id=WP_001043108.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	77087	77500	.	-	.	ID=gene-C9E94_RS03700;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=C9E94_RS03700;old_locus_tag=C9E94_03785
NZ_PYJR01000034.1	Protein Homology	CDS	77087	77500	.	-	0	ID=cds-WP_000637965.1;Parent=gene-C9E94_RS03700;Dbxref=GenBank:WP_000637965.1;Name=WP_000637965.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459591.1;locus_tag=C9E94_RS03700;product=proofreading thioesterase EntH;protein_id=WP_000637965.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	77503	78258	.	-	.	ID=gene-C9E94_RS03705;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=C9E94_RS03705;old_locus_tag=C9E94_03790
NZ_PYJR01000034.1	Protein Homology	CDS	77503	78258	.	-	0	ID=cds-WP_001112176.1;Parent=gene-C9E94_RS03705;Dbxref=GenBank:WP_001112176.1;Name=WP_001112176.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459590.1;locus_tag=C9E94_RS03705;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_001112176.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	78258	79115	.	-	.	ID=gene-C9E94_RS03710;Name=C9E94_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03710;old_locus_tag=C9E94_03795
NZ_PYJR01000034.1	Protein Homology	CDS	78258	79115	.	-	0	ID=cds-WP_001007166.1;Parent=gene-C9E94_RS03710;Dbxref=GenBank:WP_001007166.1;Name=WP_001007166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459589.1;locus_tag=C9E94_RS03710;product=isochorismatase;protein_id=WP_001007166.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	79129	80739	.	-	.	ID=gene-C9E94_RS03715;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=C9E94_RS03715;old_locus_tag=C9E94_03800
NZ_PYJR01000034.1	Protein Homology	CDS	79129	80739	.	-	0	ID=cds-WP_135400825.1;Parent=gene-C9E94_RS03715;Dbxref=GenBank:WP_135400825.1;Name=WP_135400825.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459588.1;locus_tag=C9E94_RS03715;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_135400825.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	80749	81924	.	-	.	ID=gene-C9E94_RS03720;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=C9E94_RS03720;old_locus_tag=C9E94_03805
NZ_PYJR01000034.1	Protein Homology	CDS	80749	81924	.	-	0	ID=cds-WP_000367601.1;Parent=gene-C9E94_RS03720;Dbxref=GenBank:WP_000367601.1;Name=WP_000367601.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=C9E94_RS03720;product=isochorismate synthase EntC;protein_id=WP_000367601.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	82233	83189	.	+	.	ID=gene-C9E94_RS03725;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=C9E94_RS03725;old_locus_tag=C9E94_03810
NZ_PYJR01000034.1	Protein Homology	CDS	82233	83189	.	+	0	ID=cds-WP_135400817.1;Parent=gene-C9E94_RS03725;Dbxref=GenBank:WP_135400817.1;Name=WP_135400817.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459586.1;locus_tag=C9E94_RS03725;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_135400817.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	83252	84496	.	-	.	ID=gene-C9E94_RS03730;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=C9E94_RS03730;old_locus_tag=C9E94_03815
NZ_PYJR01000034.1	Protein Homology	CDS	83252	84496	.	-	0	ID=cds-WP_001081670.1;Parent=gene-C9E94_RS03730;Dbxref=GenBank:WP_001081670.1;Name=WP_001081670.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459585.1;locus_tag=C9E94_RS03730;product=enterobactin transporter EntS;protein_id=WP_001081670.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	84607	85614	.	+	.	ID=gene-C9E94_RS03735;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=C9E94_RS03735;old_locus_tag=C9E94_03820
NZ_PYJR01000034.1	Protein Homology	CDS	84607	85614	.	+	0	ID=cds-WP_001277879.1;Parent=gene-C9E94_RS03735;Dbxref=GenBank:WP_001277879.1;Name=WP_001277879.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459584.1;locus_tag=C9E94_RS03735;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_001277879.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	85614	86603	.	+	.	ID=gene-C9E94_RS03740;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=C9E94_RS03740;old_locus_tag=C9E94_03825
NZ_PYJR01000034.1	Protein Homology	CDS	85614	86603	.	+	0	ID=cds-WP_000480064.1;Parent=gene-C9E94_RS03740;Dbxref=GenBank:WP_000480064.1;Name=WP_000480064.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459583.1;locus_tag=C9E94_RS03740;product=iron-enterobactin ABC transporter permease;protein_id=WP_000480064.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	86600	87394	.	+	.	ID=gene-C9E94_RS03745;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=C9E94_RS03745;old_locus_tag=C9E94_03830
NZ_PYJR01000034.1	Protein Homology	CDS	86600	87394	.	+	0	ID=cds-WP_000140620.1;Parent=gene-C9E94_RS03745;Dbxref=GenBank:WP_000140620.1;Name=WP_000140620.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459582.1;locus_tag=C9E94_RS03745;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_000140620.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	87447	88583	.	-	.	ID=gene-C9E94_RS03750;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=C9E94_RS03750;old_locus_tag=C9E94_03835
NZ_PYJR01000034.1	Protein Homology	CDS	87447	88583	.	-	0	ID=cds-WP_001139585.1;Parent=gene-C9E94_RS03750;Dbxref=GenBank:WP_001139585.1;Name=WP_001139585.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=C9E94_RS03750;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WP_001139585.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	88833	92717	.	-	.	ID=gene-C9E94_RS03755;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=C9E94_RS03755;old_locus_tag=C9E94_03840
NZ_PYJR01000034.1	Protein Homology	CDS	88833	92717	.	-	0	ID=cds-WP_135400818.1;Parent=gene-C9E94_RS03755;Dbxref=GenBank:WP_135400818.1;Name=WP_135400818.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=C9E94_RS03755;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_135400818.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	92714	92932	.	-	.	ID=gene-C9E94_RS03760;Name=C9E94_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03760;old_locus_tag=C9E94_03845
NZ_PYJR01000034.1	Protein Homology	CDS	92714	92932	.	-	0	ID=cds-WP_000396006.1;Parent=gene-C9E94_RS03760;Dbxref=GenBank:WP_000396006.1;Name=WP_000396006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459579.1;locus_tag=C9E94_RS03760;product=MbtH family protein;protein_id=WP_000396006.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	92963	94177	.	-	.	ID=gene-C9E94_RS03765;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=C9E94_RS03765;old_locus_tag=C9E94_03850
NZ_PYJR01000034.1	Protein Homology	CDS	92963	94177	.	-	0	ID=cds-WP_023206873.1;Parent=gene-C9E94_RS03765;Dbxref=GenBank:WP_023206873.1;Name=WP_023206873.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459578.1;locus_tag=C9E94_RS03765;product=enterochelin esterase;protein_id=WP_023206873.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	94365	96620	.	+	.	ID=gene-C9E94_RS03770;Name=C9E94_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03770;old_locus_tag=C9E94_03855
NZ_PYJR01000034.1	Protein Homology	CDS	94365	96620	.	+	0	ID=cds-WP_135400819.1;Parent=gene-C9E94_RS03770;Dbxref=GenBank:WP_135400819.1;Name=WP_135400819.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459577.1;locus_tag=C9E94_RS03770;product=TonB-dependent siderophore receptor;protein_id=WP_135400819.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	96667	97371	.	+	.	ID=gene-C9E94_RS03775;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=C9E94_RS03775;old_locus_tag=C9E94_03860
NZ_PYJR01000034.1	Protein Homology	CDS	96667	97371	.	+	0	ID=cds-WP_135400820.1;Parent=gene-C9E94_RS03775;Dbxref=GenBank:WP_135400820.1;Name=WP_135400820.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459576.1;locus_tag=C9E94_RS03775;product=enterobactin synthase subunit EntD;protein_id=WP_135400820.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	97383	98501	.	+	.	ID=gene-C9E94_RS03780;Name=C9E94_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03780;old_locus_tag=C9E94_03865
NZ_PYJR01000034.1	Protein Homology	CDS	97383	98501	.	+	0	ID=cds-WP_001196910.1;Parent=gene-C9E94_RS03780;Dbxref=GenBank:WP_001196910.1;Name=WP_001196910.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459575.1;locus_tag=C9E94_RS03780;product=YbdK family carboxylate-amine ligase;protein_id=WP_001196910.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	98568	98816	.	+	.	ID=gene-C9E94_RS03785;Name=C9E94_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03785;old_locus_tag=C9E94_03870
NZ_PYJR01000034.1	Protein Homology	CDS	98568	98816	.	+	0	ID=cds-WP_023206876.1;Parent=gene-C9E94_RS03785;Dbxref=GenBank:WP_023206876.1;Name=WP_023206876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459574.1;locus_tag=C9E94_RS03785;product=DUF1158 family protein;protein_id=WP_023206876.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	98822	99163	.	-	.	ID=gene-C9E94_RS03790;Name=C9E94_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03790;old_locus_tag=C9E94_03875
NZ_PYJR01000034.1	Protein Homology	CDS	98822	99163	.	-	0	ID=cds-WP_000155633.1;Parent=gene-C9E94_RS03790;Dbxref=GenBank:WP_000155633.1;Name=WP_000155633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459573.1;locus_tag=C9E94_RS03790;product=RamA family antibiotic efflux transcriptional regulator;protein_id=WP_000155633.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	99452	100033	.	+	.	ID=gene-C9E94_RS03795;Name=C9E94_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03795;old_locus_tag=C9E94_03880
NZ_PYJR01000034.1	Protein Homology	CDS	99452	100033	.	+	0	ID=cds-WP_000113609.1;Parent=gene-C9E94_RS03795;Dbxref=GenBank:WP_000113609.1;Name=WP_000113609.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459572.1;locus_tag=C9E94_RS03795;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000113609.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	100033	100401	.	+	.	ID=gene-C9E94_RS03800;Name=C9E94_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03800;old_locus_tag=C9E94_03885
NZ_PYJR01000034.1	Protein Homology	CDS	100033	100401	.	+	0	ID=cds-WP_000348999.1;Parent=gene-C9E94_RS03800;Dbxref=GenBank:WP_000348999.1;Name=WP_000348999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459571.1;locus_tag=C9E94_RS03800;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000348999.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	100498	101151	.	+	.	ID=gene-C9E94_RS03805;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=C9E94_RS03805;old_locus_tag=C9E94_03890
NZ_PYJR01000034.1	Protein Homology	CDS	100498	101151	.	+	0	ID=cds-WP_052934672.1;Parent=gene-C9E94_RS03805;Dbxref=GenBank:WP_052934672.1;Name=WP_052934672.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459570.1;locus_tag=C9E94_RS03805;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_052934672.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	101417	103387	.	-	.	ID=gene-C9E94_RS03810;Name=C9E94_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03810;old_locus_tag=C9E94_03895
NZ_PYJR01000034.1	Protein Homology	CDS	101417	103387	.	-	0	ID=cds-WP_000192426.1;Parent=gene-C9E94_RS03810;Dbxref=GenBank:WP_000192426.1;Name=WP_000192426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459562.1;locus_tag=C9E94_RS03810;product=autotransporter domain-containing esterase;protein_id=WP_000192426.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	103698	104945	.	+	.	ID=gene-C9E94_RS03815;Name=C9E94_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03815;old_locus_tag=C9E94_03905
NZ_PYJR01000034.1	Protein Homology	CDS	103698	104945	.	+	0	ID=cds-WP_135400821.1;Parent=gene-C9E94_RS03815;Dbxref=GenBank:WP_135400821.1;Name=WP_135400821.1;Ontology_term=GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459561.1;locus_tag=C9E94_RS03815;product=mechanosensitive ion channel family protein;protein_id=WP_135400821.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	104987	106381	.	-	.	ID=gene-C9E94_RS03820;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=C9E94_RS03820;old_locus_tag=C9E94_03910
NZ_PYJR01000034.1	Protein Homology	CDS	104987	106381	.	-	0	ID=cds-WP_000786291.1;Parent=gene-C9E94_RS03820;Dbxref=GenBank:WP_000786291.1;Name=WP_000786291.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459560.1;locus_tag=C9E94_RS03820;product=phenylalanine transporter;protein_id=WP_000786291.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	106707	107882	.	+	.	ID=gene-C9E94_RS03825;Name=C9E94_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03825;old_locus_tag=C9E94_03915
NZ_PYJR01000034.1	Protein Homology	CDS	106707	107882	.	+	0	ID=cds-WP_001033457.1;Parent=gene-C9E94_RS03825;Dbxref=GenBank:WP_001033457.1;Name=WP_001033457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=C9E94_RS03825;product=DnaJ family molecular chaperone;protein_id=WP_001033457.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	107969	108529	.	-	.	ID=gene-C9E94_RS03830;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=C9E94_RS03830;old_locus_tag=C9E94_03920
NZ_PYJR01000034.1	Protein Homology	CDS	107969	108529	.	-	0	ID=cds-WP_000362181.1;Parent=gene-C9E94_RS03830;Dbxref=GenBank:WP_000362181.1;Name=WP_000362181.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459558.1;locus_tag=C9E94_RS03830;product=reactive chlorine resistance membrane protein RclC;protein_id=WP_000362181.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	108542	108778	.	-	.	ID=gene-C9E94_RS03835;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=C9E94_RS03835;old_locus_tag=C9E94_03925
NZ_PYJR01000034.1	Protein Homology	CDS	108542	108778	.	-	0	ID=cds-WP_000922173.1;Parent=gene-C9E94_RS03835;Dbxref=GenBank:WP_000922173.1;Name=WP_000922173.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459557.1;locus_tag=C9E94_RS03835;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WP_000922173.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	108935	110260	.	-	.	ID=gene-C9E94_RS03840;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=C9E94_RS03840;old_locus_tag=C9E94_03930
NZ_PYJR01000034.1	Protein Homology	CDS	108935	110260	.	-	0	ID=cds-WP_135400822.1;Parent=gene-C9E94_RS03840;Dbxref=GenBank:WP_135400822.1;Name=WP_135400822.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459556.1;locus_tag=C9E94_RS03840;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WP_135400822.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	110476	111330	.	+	.	ID=gene-C9E94_RS03845;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=C9E94_RS03845;old_locus_tag=C9E94_03935
NZ_PYJR01000034.1	Protein Homology	CDS	110476	111330	.	+	0	ID=cds-WP_135400823.1;Parent=gene-C9E94_RS03845;Dbxref=GenBank:WP_135400823.1;Name=WP_135400823.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459555.1;locus_tag=C9E94_RS03845;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WP_135400823.1;transl_table=11
NZ_PYJR01000034.1	RefSeq	pseudogene	111381	111620	.	-	.	ID=gene-C9E94_RS03850;Name=C9E94_RS03850;end_range=111620,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS03850;old_locus_tag=C9E94_03940;partial=true;pseudo=true
NZ_PYJR01000034.1	Protein Homology	CDS	111381	111620	.	-	0	ID=cds-C9E94_RS03850;Parent=gene-C9E94_RS03850;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=111620,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000574020.1;locus_tag=C9E94_RS03850;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYJR01000034.1	RefSeq	pseudogene	111624	111997	.	+	.	ID=gene-C9E94_RS03855;Name=C9E94_RS03855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS03855;old_locus_tag=C9E94_03945;partial=true;pseudo=true;start_range=.,111624
NZ_PYJR01000034.1	Protein Homology	CDS	111624	111997	.	+	0	ID=cds-C9E94_RS03855;Parent=gene-C9E94_RS03855;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635961.1;locus_tag=C9E94_RS03855;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,111624;transl_table=11
NZ_PYJR01000034.1	RefSeq	gene	112196	112441	.	+	.	ID=gene-C9E94_RS03860;Name=C9E94_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS03860;old_locus_tag=C9E94_03950
NZ_PYJR01000034.1	Protein Homology	CDS	112196	112441	.	+	0	ID=cds-WP_079899207.1;Parent=gene-C9E94_RS03860;Dbxref=GenBank:WP_079899207.1;Name=WP_079899207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000230236.1;locus_tag=C9E94_RS03860;product=copper-binding protein;protein_id=WP_079899207.1;transl_table=11
##sequence-region NZ_PYJR01000085.1 1 7461
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000085.1	RefSeq	region	1	7461	.	+	.	ID=NZ_PYJR01000085.1:1..7461;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000085.1	RefSeq	gene	29	982	.	+	.	ID=gene-C9E94_RS11465;Name=sopD;gbkey=Gene;gene=sopD;gene_biotype=protein_coding;locus_tag=C9E94_RS11465;old_locus_tag=C9E94_11715
NZ_PYJR01000085.1	Protein Homology	CDS	29	982	.	+	0	ID=cds-WP_023261989.1;Parent=gene-C9E94_RS11465;Dbxref=GenBank:WP_023261989.1;Name=WP_023261989.1;gbkey=CDS;gene=sopD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441126.1;locus_tag=C9E94_RS11465;product=SPI-1 type III secretion system effector SopD;protein_id=WP_023261989.1;transl_table=11
NZ_PYJR01000085.1	RefSeq	gene	1195	1929	.	-	.	ID=gene-C9E94_RS11470;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=C9E94_RS11470;old_locus_tag=C9E94_11725
NZ_PYJR01000085.1	Protein Homology	CDS	1195	1929	.	-	0	ID=cds-WP_000039870.1;Parent=gene-C9E94_RS11470;Dbxref=GenBank:WP_000039870.1;Name=WP_000039870.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461867.1;locus_tag=C9E94_RS11470;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000039870.1;transl_table=11
NZ_PYJR01000085.1	RefSeq	gene	2031	3743	.	-	.	ID=gene-C9E94_RS11480;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=C9E94_RS11480;old_locus_tag=C9E94_11735
NZ_PYJR01000085.1	Protein Homology	CDS	2031	3743	.	-	0	ID=cds-WP_023993661.1;Parent=gene-C9E94_RS11480;Dbxref=GenBank:WP_023993661.1;Name=WP_023993661.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=C9E94_RS11480;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_023993661.1;transl_table=11
NZ_PYJR01000085.1	RefSeq	gene	3743	5542	.	-	.	ID=gene-C9E94_RS11485;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=C9E94_RS11485;old_locus_tag=C9E94_11740
NZ_PYJR01000085.1	Protein Homology	CDS	3743	5542	.	-	0	ID=cds-WP_135401031.1;Parent=gene-C9E94_RS11485;Dbxref=GenBank:WP_135401031.1;Name=WP_135401031.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461869.1;locus_tag=C9E94_RS11485;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_135401031.1;transl_table=11
NZ_PYJR01000085.1	RefSeq	gene	5966	6328	.	+	.	ID=gene-C9E94_RS11495;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=C9E94_RS11495;old_locus_tag=C9E94_11750
NZ_PYJR01000085.1	Protein Homology	CDS	5966	6328	.	+	0	ID=cds-WP_000108313.1;Parent=gene-C9E94_RS11495;Dbxref=GenBank:WP_000108313.1;Name=WP_000108313.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461870.1;locus_tag=C9E94_RS11495;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_000108313.1;transl_table=11
NZ_PYJR01000085.1	RefSeq	gene	6416	7213	.	-	.	ID=gene-C9E94_RS11500;Name=C9E94_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11500;old_locus_tag=C9E94_11755
NZ_PYJR01000085.1	Protein Homology	CDS	6416	7213	.	-	0	ID=cds-WP_080203813.1;Parent=gene-C9E94_RS11500;Dbxref=GenBank:WP_080203813.1;Name=WP_080203813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461871.1;locus_tag=C9E94_RS11500;product=MBL fold metallo-hydrolase;protein_id=WP_080203813.1;transl_table=11
##sequence-region NZ_PYJR01000053.1 1 6937
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000053.1	RefSeq	region	1	6937	.	+	.	ID=NZ_PYJR01000053.1:1..6937;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000053.1	RefSeq	pseudogene	1	731	.	+	.	ID=gene-C9E94_RS07160;Name=C9E94_RS07160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS07160;old_locus_tag=C9E94_07340;partial=true;pseudo=true;start_range=.,1
NZ_PYJR01000053.1	Protein Homology	CDS	1	731	.	+	2	ID=cds-C9E94_RS07160;Parent=gene-C9E94_RS07160;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460513.1;locus_tag=C9E94_RS07160;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYJR01000053.1	RefSeq	gene	997	1977	.	-	.	ID=gene-C9E94_RS07165;Name=C9E94_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07165;old_locus_tag=C9E94_07345
NZ_PYJR01000053.1	Protein Homology	CDS	997	1977	.	-	0	ID=cds-WP_094889259.1;Parent=gene-C9E94_RS07165;Dbxref=GenBank:WP_094889259.1;Name=WP_094889259.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441349.1;locus_tag=C9E94_RS07165;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_094889259.1;transl_table=11
NZ_PYJR01000053.1	RefSeq	gene	2151	3059	.	-	.	ID=gene-C9E94_RS07170;Name=C9E94_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07170;old_locus_tag=C9E94_07350
NZ_PYJR01000053.1	Protein Homology	CDS	2151	3059	.	-	0	ID=cds-WP_023994284.1;Parent=gene-C9E94_RS07170;Dbxref=GenBank:WP_023994284.1;Name=WP_023994284.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176636.1;locus_tag=C9E94_RS07170;product=LysR family transcriptional regulator;protein_id=WP_023994284.1;transl_table=11
NZ_PYJR01000053.1	RefSeq	gene	3970	4374	.	+	.	ID=gene-C9E94_RS07180;Name=C9E94_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07180;old_locus_tag=C9E94_07355
NZ_PYJR01000053.1	Protein Homology	CDS	3970	4374	.	+	0	ID=cds-WP_255123225.1;Parent=gene-C9E94_RS07180;Dbxref=GenBank:WP_255123225.1;Name=WP_255123225.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024908.6;locus_tag=C9E94_RS07180;product=helix-turn-helix domain-containing protein;protein_id=WP_255123225.1;transl_table=11
NZ_PYJR01000053.1	RefSeq	pseudogene	4275	4511	.	-	.	ID=gene-C9E94_RS07185;Name=C9E94_RS07185;end_range=4511,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS07185;old_locus_tag=C9E94_07360;partial=true;pseudo=true;start_range=.,4275
NZ_PYJR01000053.1	Protein Homology	CDS	4275	4511	.	-	0	ID=cds-C9E94_RS07185;Parent=gene-C9E94_RS07185;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4511,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460512.1;locus_tag=C9E94_RS07185;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4275;transl_table=11
NZ_PYJR01000053.1	RefSeq	pseudogene	4564	4662	.	-	.	ID=gene-C9E94_RS23785;Name=C9E94_RS23785;end_range=4662,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23785;partial=true;pseudo=true
NZ_PYJR01000053.1	Protein Homology	CDS	4564	4662	.	-	0	ID=cds-C9E94_RS23785;Parent=gene-C9E94_RS23785;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4662,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_090138499.1;locus_tag=C9E94_RS23785;partial=true;product=STM2901 family protein;pseudo=true;transl_table=11
NZ_PYJR01000053.1	RefSeq	gene	4927	5175	.	+	.	ID=gene-C9E94_RS07195;Name=C9E94_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07195;old_locus_tag=C9E94_07370
NZ_PYJR01000053.1	Protein Homology	CDS	4927	5175	.	+	0	ID=cds-WP_000885426.1;Parent=gene-C9E94_RS07195;Dbxref=GenBank:WP_000885426.1;Name=WP_000885426.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460511.1;locus_tag=C9E94_RS07195;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_000885426.1;transl_table=11
NZ_PYJR01000053.1	RefSeq	gene	5165	5449	.	+	.	ID=gene-C9E94_RS07200;Name=C9E94_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07200;old_locus_tag=C9E94_07375
NZ_PYJR01000053.1	Protein Homology	CDS	5165	5449	.	+	0	ID=cds-WP_000221343.1;Parent=gene-C9E94_RS07200;Dbxref=GenBank:WP_000221343.1;Name=WP_000221343.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460510.1;locus_tag=C9E94_RS07200;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_000221343.1;transl_table=11
NZ_PYJR01000053.1	RefSeq	gene	5620	6009	.	+	.	ID=gene-C9E94_RS07205;Name=C9E94_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07205;old_locus_tag=C9E94_07380
NZ_PYJR01000053.1	Protein Homology	CDS	5620	6009	.	+	0	ID=cds-WP_023993262.1;Parent=gene-C9E94_RS07205;Dbxref=GenBank:WP_023993262.1;Name=WP_023993262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460509.1;locus_tag=C9E94_RS07205;product=RidA family protein;protein_id=WP_023993262.1;transl_table=11
NZ_PYJR01000053.1	RefSeq	gene	6057	6937	.	-	.	ID=gene-C9E94_RS07210;Name=C9E94_RS07210;end_range=6937,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07210;old_locus_tag=C9E94_07385;partial=true
NZ_PYJR01000053.1	Protein Homology	CDS	6057	6937	.	-	2	ID=cds-WP_135400898.1;Parent=gene-C9E94_RS07210;Dbxref=GenBank:WP_135400898.1;Name=WP_135400898.1;Ontology_term=GO:0016740,GO:0016853;end_range=6937,.;gbkey=CDS;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000954687.1;locus_tag=C9E94_RS07210;partial=true;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_135400898.1;transl_table=11
##sequence-region NZ_PYJR01000030.1 1 6738
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000030.1	RefSeq	region	1	6738	.	+	.	ID=NZ_PYJR01000030.1:1..6738;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000030.1	RefSeq	gene	1	243	.	+	.	ID=gene-C9E94_RS23420;Name=C9E94_RS23420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23420;old_locus_tag=C9E94_02870;partial=true;start_range=.,1
NZ_PYJR01000030.1	GeneMarkS-2+	CDS	1	243	.	+	0	ID=cds-WP_255123165.1;Parent=gene-C9E94_RS23420;Dbxref=GenBank:WP_255123165.1;Name=WP_255123165.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS23420;partial=true;product=hypothetical protein;protein_id=WP_255123165.1;start_range=.,1;transl_table=11
NZ_PYJR01000030.1	RefSeq	gene	289	825	.	+	.	ID=gene-C9E94_RS02800;Name=C9E94_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02800;old_locus_tag=C9E94_02875
NZ_PYJR01000030.1	Protein Homology	CDS	289	825	.	+	0	ID=cds-WP_001038500.1;Parent=gene-C9E94_RS02800;Dbxref=GenBank:WP_001038500.1;Name=WP_001038500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461948.1;locus_tag=C9E94_RS02800;product=STM3031 family outer membrane protein;protein_id=WP_001038500.1;transl_table=11
NZ_PYJR01000030.1	RefSeq	gene	872	1504	.	+	.	ID=gene-C9E94_RS02805;Name=C9E94_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02805;old_locus_tag=C9E94_02880
NZ_PYJR01000030.1	Protein Homology	CDS	872	1504	.	+	0	ID=cds-WP_000835262.1;Parent=gene-C9E94_RS02805;Dbxref=GenBank:WP_000835262.1;Name=WP_000835262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461947.1;locus_tag=C9E94_RS02805;product=YfdX family protein;protein_id=WP_000835262.1;transl_table=11
NZ_PYJR01000030.1	RefSeq	gene	2223	2807	.	+	.	ID=gene-C9E94_RS02810;Name=C9E94_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS02810;old_locus_tag=C9E94_02885
NZ_PYJR01000030.1	Protein Homology	CDS	2223	2807	.	+	0	ID=cds-WP_023993960.1;Parent=gene-C9E94_RS02810;Dbxref=GenBank:WP_023993960.1;Name=WP_023993960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406296.1;locus_tag=C9E94_RS02810;product=fimbrial protein;protein_id=WP_023993960.1;transl_table=11
NZ_PYJR01000030.1	RefSeq	gene	2927	5416	.	+	.	ID=gene-C9E94_RS02815;Name=stdB;gbkey=Gene;gene=stdB;gene_biotype=protein_coding;locus_tag=C9E94_RS02815;old_locus_tag=C9E94_02890
NZ_PYJR01000030.1	Protein Homology	CDS	2927	5416	.	+	0	ID=cds-WP_135400800.1;Parent=gene-C9E94_RS02815;Dbxref=GenBank:WP_135400800.1;Name=WP_135400800.1;gbkey=CDS;gene=stdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461945.1;locus_tag=C9E94_RS02815;product=fimbrial outer membrane usher protein StdB;protein_id=WP_135400800.1;transl_table=11
NZ_PYJR01000030.1	RefSeq	gene	5457	6200	.	+	.	ID=gene-C9E94_RS02820;Name=stdC;gbkey=Gene;gene=stdC;gene_biotype=protein_coding;locus_tag=C9E94_RS02820;old_locus_tag=C9E94_02895
NZ_PYJR01000030.1	Protein Homology	CDS	5457	6200	.	+	0	ID=cds-WP_000798496.1;Parent=gene-C9E94_RS02820;Dbxref=GenBank:WP_000798496.1;Name=WP_000798496.1;gbkey=CDS;gene=stdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461944.1;locus_tag=C9E94_RS02820;product=fimbrial biogenesis chaperone StdC;protein_id=WP_000798496.1;transl_table=11
NZ_PYJR01000030.1	RefSeq	pseudogene	6197	6738	.	+	.	ID=gene-C9E94_RS02825;Name=C9E94_RS02825;end_range=6738,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS02825;old_locus_tag=C9E94_02900;partial=true;pseudo=true
NZ_PYJR01000030.1	Protein Homology	CDS	6197	6738	.	+	0	ID=cds-C9E94_RS02825;Parent=gene-C9E94_RS02825;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=6738,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147761.1;locus_tag=C9E94_RS02825;partial=true;product=adhesion protein;pseudo=true;transl_table=11
##sequence-region NZ_PYJR01000109.1 1 6291
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000109.1	RefSeq	region	1	6291	.	+	.	ID=NZ_PYJR01000109.1:1..6291;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000109.1	RefSeq	gene	1	618	.	+	.	ID=gene-C9E94_RS16505;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=C9E94_RS16505;old_locus_tag=C9E94_16895;partial=true;start_range=.,1
NZ_PYJR01000109.1	Protein Homology	CDS	1	618	.	+	0	ID=cds-WP_064173735.1;Parent=gene-C9E94_RS16505;Dbxref=GenBank:WP_064173735.1;Name=WP_064173735.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=C9E94_RS16505;partial=true;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_064173735.1;start_range=.,1;transl_table=11
NZ_PYJR01000109.1	RefSeq	gene	615	1274	.	+	.	ID=gene-C9E94_RS16510;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=C9E94_RS16510;old_locus_tag=C9E94_16900
NZ_PYJR01000109.1	Protein Homology	CDS	615	1274	.	+	0	ID=cds-WP_020838447.1;Parent=gene-C9E94_RS16510;Dbxref=GenBank:WP_020838447.1;Name=WP_020838447.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=C9E94_RS16510;product=heme exporter protein CcmB;protein_id=WP_020838447.1;transl_table=11
NZ_PYJR01000109.1	RefSeq	gene	1326	2063	.	+	.	ID=gene-C9E94_RS16515;Name=C9E94_RS16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16515;old_locus_tag=C9E94_16905
NZ_PYJR01000109.1	Protein Homology	CDS	1326	2063	.	+	0	ID=cds-WP_135401136.1;Parent=gene-C9E94_RS16515;Dbxref=GenBank:WP_135401136.1;Name=WP_135401136.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=C9E94_RS16515;product=heme ABC transporter permease;protein_id=WP_135401136.1;transl_table=11
NZ_PYJR01000109.1	RefSeq	gene	2060	2272	.	+	.	ID=gene-C9E94_RS16520;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=C9E94_RS16520;old_locus_tag=C9E94_16910
NZ_PYJR01000109.1	Protein Homology	CDS	2060	2272	.	+	0	ID=cds-WP_000074110.1;Parent=gene-C9E94_RS16520;Dbxref=GenBank:WP_000074110.1;Name=WP_000074110.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=C9E94_RS16520;product=heme exporter protein CcmD;protein_id=WP_000074110.1;transl_table=11
NZ_PYJR01000109.1	RefSeq	gene	2269	2748	.	+	.	ID=gene-C9E94_RS16525;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=C9E94_RS16525;old_locus_tag=C9E94_16915
NZ_PYJR01000109.1	Protein Homology	CDS	2269	2748	.	+	0	ID=cds-WP_001053600.1;Parent=gene-C9E94_RS16525;Dbxref=GenBank:WP_001053600.1;Name=WP_001053600.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=C9E94_RS16525;product=cytochrome c maturation protein CcmE;protein_id=WP_001053600.1;transl_table=11
NZ_PYJR01000109.1	RefSeq	gene	2745	4676	.	+	.	ID=gene-C9E94_RS16530;Name=C9E94_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16530;old_locus_tag=C9E94_16920
NZ_PYJR01000109.1	Protein Homology	CDS	2745	4676	.	+	0	ID=cds-WP_000982515.1;Parent=gene-C9E94_RS16530;Dbxref=GenBank:WP_000982515.1;Name=WP_000982515.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=C9E94_RS16530;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_000982515.1;transl_table=11
NZ_PYJR01000109.1	RefSeq	gene	4673	5230	.	+	.	ID=gene-C9E94_RS16535;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=C9E94_RS16535;old_locus_tag=C9E94_16925
NZ_PYJR01000109.1	Protein Homology	CDS	4673	5230	.	+	0	ID=cds-WP_063814174.1;Parent=gene-C9E94_RS16535;Dbxref=GenBank:WP_063814174.1;Name=WP_063814174.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=C9E94_RS16535;product=thiol:disulfide interchange protein DsbE;protein_id=WP_063814174.1;transl_table=11
NZ_PYJR01000109.1	RefSeq	gene	5227	6270	.	+	.	ID=gene-C9E94_RS16540;Name=C9E94_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16540;old_locus_tag=C9E94_16930
NZ_PYJR01000109.1	Protein Homology	CDS	5227	6270	.	+	0	ID=cds-WP_135401137.1;Parent=gene-C9E94_RS16540;Dbxref=GenBank:WP_135401137.1;Name=WP_135401137.1;Ontology_term=GO:0017004,GO:0015035,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=protein-disulfide reductase activity|0015035||IEA,metal ion binding|0046872||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=C9E94_RS16540;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_135401137.1;transl_table=11
##sequence-region NZ_PYJR01000051.1 1 6260
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000051.1	RefSeq	region	1	6260	.	+	.	ID=NZ_PYJR01000051.1:1..6260;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000051.1	RefSeq	gene	1	1379	.	+	.	ID=gene-C9E94_RS06670;Name=C9E94_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06670;old_locus_tag=C9E94_06840;partial=true;start_range=.,1
NZ_PYJR01000051.1	Protein Homology	CDS	1	1379	.	+	2	ID=cds-WP_080199816.1;Parent=gene-C9E94_RS06670;Dbxref=GenBank:WP_080199816.1;Name=WP_080199816.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=C9E94_RS06670;partial=true;product=molybdopterin dinucleotide binding domain-containing protein;protein_id=WP_080199816.1;start_range=.,1;transl_table=11
NZ_PYJR01000051.1	RefSeq	gene	1376	2911	.	+	.	ID=gene-C9E94_RS06675;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=C9E94_RS06675;old_locus_tag=C9E94_06845
NZ_PYJR01000051.1	Protein Homology	CDS	1376	2911	.	+	0	ID=cds-WP_094889318.1;Parent=gene-C9E94_RS06675;Dbxref=GenBank:WP_094889318.1;Name=WP_094889318.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460719.1;locus_tag=C9E94_RS06675;product=nitrate reductase subunit beta;protein_id=WP_094889318.1;transl_table=11
NZ_PYJR01000051.1	RefSeq	gene	2908	3618	.	+	.	ID=gene-C9E94_RS06680;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=C9E94_RS06680;old_locus_tag=C9E94_06850
NZ_PYJR01000051.1	Protein Homology	CDS	2908	3618	.	+	0	ID=cds-WP_000571668.1;Parent=gene-C9E94_RS06680;Dbxref=GenBank:WP_000571668.1;Name=WP_000571668.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460718.1;locus_tag=C9E94_RS06680;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_000571668.1;transl_table=11
NZ_PYJR01000051.1	RefSeq	gene	3618	4295	.	+	.	ID=gene-C9E94_RS06685;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=C9E94_RS06685;old_locus_tag=C9E94_06855
NZ_PYJR01000051.1	Protein Homology	CDS	3618	4295	.	+	0	ID=cds-WP_000545594.1;Parent=gene-C9E94_RS06685;Dbxref=GenBank:WP_000545594.1;Name=WP_000545594.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460717.1;locus_tag=C9E94_RS06685;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000545594.1;transl_table=11
NZ_PYJR01000051.1	RefSeq	gene	4537	6066	.	+	.	ID=gene-C9E94_RS06695;Name=C9E94_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS06695;old_locus_tag=C9E94_06865
NZ_PYJR01000051.1	Protein Homology	CDS	4537	6066	.	+	0	ID=cds-WP_001672683.1;Parent=gene-C9E94_RS06695;Dbxref=GenBank:WP_001672683.1;Name=WP_001672683.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460716.1;locus_tag=C9E94_RS06695;product=tetratricopeptide repeat protein;protein_id=WP_001672683.1;transl_table=11
NZ_PYJR01000051.1	RefSeq	gene	6169	6260	.	-	.	ID=gene-C9E94_RS06700;Name=C9E94_RS06700;end_range=6260,.;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E94_RS06700;old_locus_tag=C9E94_06870;partial=true
NZ_PYJR01000051.1	cmsearch	ncRNA	6169	6260	.	-	.	ID=rna-C9E94_RS06700;Parent=gene-C9E94_RS06700;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;end_range=6260,.;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS06700;partial=true;product=RtT sRNA
NZ_PYJR01000051.1	cmsearch	exon	6169	6260	.	-	.	ID=exon-C9E94_RS06700-1;Parent=rna-C9E94_RS06700;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;end_range=6260,.;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E94_RS06700;partial=true;product=RtT sRNA
##sequence-region NZ_PYJR01000110.1 1 6241
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000110.1	RefSeq	region	1	6241	.	+	.	ID=NZ_PYJR01000110.1:1..6241;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000110.1	RefSeq	gene	164	694	.	-	.	ID=gene-C9E94_RS16545;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=C9E94_RS16545;old_locus_tag=C9E94_16935
NZ_PYJR01000110.1	Protein Homology	CDS	164	694	.	-	0	ID=cds-WP_000168322.1;Parent=gene-C9E94_RS16545;Dbxref=GenBank:WP_000168322.1;Name=WP_000168322.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463121.1;locus_tag=C9E94_RS16545;product=single-stranded DNA-binding protein SSB1;protein_id=WP_000168322.1;transl_table=11
NZ_PYJR01000110.1	RefSeq	gene	942	3767	.	+	.	ID=gene-C9E94_RS16555;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=C9E94_RS16555;old_locus_tag=C9E94_16945
NZ_PYJR01000110.1	Protein Homology	CDS	942	3767	.	+	0	ID=cds-WP_000357725.1;Parent=gene-C9E94_RS16555;Dbxref=GenBank:WP_000357725.1;Name=WP_000357725.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463119.1;locus_tag=C9E94_RS16555;product=excinuclease ABC subunit UvrA;protein_id=WP_000357725.1;transl_table=11
NZ_PYJR01000110.1	RefSeq	gene	3899	4354	.	+	.	ID=gene-C9E94_RS16560;Name=C9E94_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16560;old_locus_tag=C9E94_16950
NZ_PYJR01000110.1	Protein Homology	CDS	3899	4354	.	+	0	ID=cds-WP_080181020.1;Parent=gene-C9E94_RS16560;Dbxref=GenBank:WP_080181020.1;Name=WP_080181020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463118.1;locus_tag=C9E94_RS16560;product=hypothetical protein;protein_id=WP_080181020.1;transl_table=11
NZ_PYJR01000110.1	RefSeq	gene	4341	4679	.	+	.	ID=gene-C9E94_RS16565;Name=C9E94_RS16565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16565;old_locus_tag=C9E94_16955
NZ_PYJR01000110.1	Protein Homology	CDS	4341	4679	.	+	0	ID=cds-WP_080111311.1;Parent=gene-C9E94_RS16565;Dbxref=GenBank:WP_080111311.1;Name=WP_080111311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463117.1;locus_tag=C9E94_RS16565;product=hypothetical protein;protein_id=WP_080111311.1;transl_table=11
NZ_PYJR01000110.1	RefSeq	gene	4680	5036	.	-	.	ID=gene-C9E94_RS16570;Name=C9E94_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16570;old_locus_tag=C9E94_16960
NZ_PYJR01000110.1	Protein Homology	CDS	4680	5036	.	-	0	ID=cds-WP_135401138.1;Parent=gene-C9E94_RS16570;Dbxref=GenBank:WP_135401138.1;Name=WP_135401138.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463116.1;locus_tag=C9E94_RS16570;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_135401138.1;transl_table=11
NZ_PYJR01000110.1	RefSeq	gene	5039	5455	.	-	.	ID=gene-C9E94_RS16575;Name=C9E94_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS16575;old_locus_tag=C9E94_16965
NZ_PYJR01000110.1	Protein Homology	CDS	5039	5455	.	-	0	ID=cds-WP_000270392.1;Parent=gene-C9E94_RS16575;Dbxref=GenBank:WP_000270392.1;Name=WP_000270392.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463115.1;locus_tag=C9E94_RS16575;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_000270392.1;transl_table=11
NZ_PYJR01000110.1	RefSeq	gene	5584	6241	.	-	.	ID=gene-C9E94_RS16580;Name=aphA;end_range=6241,.;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=C9E94_RS16580;old_locus_tag=C9E94_16970;partial=true
NZ_PYJR01000110.1	Protein Homology	CDS	5584	6241	.	-	1	ID=cds-WP_079833529.1;Parent=gene-C9E94_RS16580;Dbxref=GenBank:WP_079833529.1;Name=WP_079833529.1;Ontology_term=GO:0003993,GO:0030288;end_range=6241,.;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463114.1;locus_tag=C9E94_RS16580;partial=true;product=acid phosphatase AphA;protein_id=WP_079833529.1;transl_table=11
##sequence-region NZ_PYJR01000129.1 1 5865
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000129.1	RefSeq	region	1	5865	.	+	.	ID=NZ_PYJR01000129.1:1..5865;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000129.1	RefSeq	gene	276	1433	.	+	.	ID=gene-C9E94_RS19465;Name=C9E94_RS19465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19465;old_locus_tag=C9E94_19960
NZ_PYJR01000129.1	Protein Homology	CDS	276	1433	.	+	0	ID=cds-WP_000160383.1;Parent=gene-C9E94_RS19465;Dbxref=GenBank:WP_000160383.1;Name=WP_000160383.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=C9E94_RS19465;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_000160383.1;transl_table=11
NZ_PYJR01000129.1	RefSeq	gene	1445	4558	.	+	.	ID=gene-C9E94_RS19470;Name=C9E94_RS19470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19470;old_locus_tag=C9E94_19965
NZ_PYJR01000129.1	Protein Homology	CDS	1445	4558	.	+	0	ID=cds-WP_001273283.1;Parent=gene-C9E94_RS19470;Dbxref=GenBank:WP_001273283.1;Name=WP_001273283.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=C9E94_RS19470;product=efflux RND transporter permease subunit;protein_id=WP_001273283.1;transl_table=11
NZ_PYJR01000129.1	RefSeq	gene	4795	5016	.	+	.	ID=gene-C9E94_RS19475;Name=C9E94_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS19475;old_locus_tag=C9E94_19970
NZ_PYJR01000129.1	Protein Homology	CDS	4795	5016	.	+	0	ID=cds-WP_000825645.1;Parent=gene-C9E94_RS19475;Dbxref=GenBank:WP_000825645.1;Name=WP_000825645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462302.1;locus_tag=C9E94_RS19475;product=membrane protein;protein_id=WP_000825645.1;transl_table=11
NZ_PYJR01000129.1	RefSeq	gene	5594	5865	.	-	.	ID=gene-C9E94_RS23515;Name=C9E94_RS23515;end_range=5865,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23515;partial=true
NZ_PYJR01000129.1	GeneMarkS-2+	CDS	5594	5865	.	-	2	ID=cds-WP_217810254.1;Parent=gene-C9E94_RS23515;Dbxref=GenBank:WP_217810254.1;Name=WP_217810254.1;end_range=5865,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS23515;partial=true;product=hypothetical protein;protein_id=WP_217810254.1;transl_table=11
##sequence-region NZ_PYJR01000070.1 1 5825
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000070.1	RefSeq	region	1	5825	.	+	.	ID=NZ_PYJR01000070.1:1..5825;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000070.1	RefSeq	gene	94	1290	.	+	.	ID=gene-C9E94_RS09065;Name=ompS1;gbkey=Gene;gene=ompS1;gene_biotype=protein_coding;locus_tag=C9E94_RS09065;old_locus_tag=C9E94_09275
NZ_PYJR01000070.1	Protein Homology	CDS	94	1290	.	+	0	ID=cds-WP_135400953.1;Parent=gene-C9E94_RS09065;Dbxref=GenBank:WP_135400953.1;Name=WP_135400953.1;gbkey=CDS;gene=ompS1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460946.1;locus_tag=C9E94_RS09065;product=porin OmpS1;protein_id=WP_135400953.1;transl_table=11
NZ_PYJR01000070.1	RefSeq	gene	1550	1738	.	-	.	ID=gene-C9E94_RS09070;Name=ymcF;gbkey=Gene;gene=ymcF;gene_biotype=protein_coding;locus_tag=C9E94_RS09070;old_locus_tag=C9E94_09280
NZ_PYJR01000070.1	Protein Homology	CDS	1550	1738	.	-	0	ID=cds-WP_024131109.1;Parent=gene-C9E94_RS09070;Dbxref=GenBank:WP_024131109.1;Name=WP_024131109.1;gbkey=CDS;gene=ymcF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=C9E94_RS09070;product=cold shock small protein YmcF;protein_id=WP_024131109.1;transl_table=11
NZ_PYJR01000070.1	RefSeq	gene	1749	1961	.	-	.	ID=gene-C9E94_RS09075;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=C9E94_RS09075;old_locus_tag=C9E94_09285
NZ_PYJR01000070.1	Protein Homology	CDS	1749	1961	.	-	0	ID=cds-WP_000208509.1;Parent=gene-C9E94_RS09075;Dbxref=GenBank:WP_000208509.1;Name=WP_000208509.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460947.1;locus_tag=C9E94_RS09075;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000208509.1;transl_table=11
NZ_PYJR01000070.1	RefSeq	gene	2416	3684	.	-	.	ID=gene-C9E94_RS09080;Name=C9E94_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09080;old_locus_tag=C9E94_09290
NZ_PYJR01000070.1	Protein Homology	CDS	2416	3684	.	-	0	ID=cds-WP_000457663.1;Parent=gene-C9E94_RS09080;Dbxref=GenBank:WP_000457663.1;Name=WP_000457663.1;Ontology_term=GO:0006974,GO:0009432,GO:0019985,GO:0042276,GO:0003684,GO:0003887;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA damage response|0006974||IEA,SOS response|0009432||IEA,translesion synthesis|0019985||IEA,error-prone translesion synthesis|0042276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=C9E94_RS09080;product=Y-family DNA polymerase;protein_id=WP_000457663.1;transl_table=11
NZ_PYJR01000070.1	RefSeq	gene	3687	4106	.	-	.	ID=gene-C9E94_RS09085;Name=C9E94_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09085;old_locus_tag=C9E94_09295
NZ_PYJR01000070.1	Protein Homology	CDS	3687	4106	.	-	0	ID=cds-WP_000394197.1;Parent=gene-C9E94_RS09085;Dbxref=GenBank:WP_000394197.1;Name=WP_000394197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460949.1;locus_tag=C9E94_RS09085;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_000394197.1;transl_table=11
NZ_PYJR01000070.1	RefSeq	gene	4697	4786	.	-	.	ID=gene-C9E94_RS09100;Name=C9E94_RS09100;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E94_RS09100;old_locus_tag=C9E94_09310
NZ_PYJR01000070.1	tRNAscan-SE	tRNA	4697	4786	.	-	.	ID=rna-C9E94_RS09100;Parent=gene-C9E94_RS09100;anticodon=(pos:complement(4750..4752));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS09100;product=tRNA-Ser
NZ_PYJR01000070.1	tRNAscan-SE	exon	4697	4786	.	-	.	ID=exon-C9E94_RS09100-1;Parent=rna-C9E94_RS09100;anticodon=(pos:complement(4750..4752));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E94_RS09100;product=tRNA-Ser
NZ_PYJR01000070.1	RefSeq	gene	4875	5672	.	+	.	ID=gene-C9E94_RS09105;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=C9E94_RS09105;old_locus_tag=C9E94_09315
NZ_PYJR01000070.1	Protein Homology	CDS	4875	5672	.	+	0	ID=cds-WP_000598920.1;Parent=gene-C9E94_RS09105;Dbxref=GenBank:WP_000598920.1;Name=WP_000598920.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460951.1;locus_tag=C9E94_RS09105;product=DgsA anti-repressor MtfA;protein_id=WP_000598920.1;transl_table=11
##sequence-region NZ_PYJR01000058.1 1 5541
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000058.1	RefSeq	region	1	5541	.	+	.	ID=NZ_PYJR01000058.1:1..5541;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000058.1	RefSeq	pseudogene	1126	1409	.	+	.	ID=gene-C9E94_RS23595;Name=C9E94_RS23595;end_range=1409,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23595;partial=true;pseudo=true
NZ_PYJR01000058.1	Protein Homology	CDS	1126	1409	.	+	0	ID=cds-C9E94_RS23595;Parent=gene-C9E94_RS23595;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0005215,GO:0005886,GO:0016020;end_range=1409,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013088.7;locus_tag=C9E94_RS23595;partial=true;product=DMT family transporter;pseudo=true;transl_table=11
NZ_PYJR01000058.1	RefSeq	gene	1419	1970	.	+	.	ID=gene-C9E94_RS23600;Name=C9E94_RS23600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23600
NZ_PYJR01000058.1	Protein Homology	CDS	1419	1970	.	+	0	ID=cds-WP_080067873.1;Parent=gene-C9E94_RS23600;Dbxref=GenBank:WP_080067873.1;Name=WP_080067873.1;Ontology_term=GO:0055085,GO:0005215,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013088.7;locus_tag=C9E94_RS23600;product=DMT family transporter;protein_id=WP_080067873.1;transl_table=11
NZ_PYJR01000058.1	RefSeq	gene	2103	2261	.	+	.	ID=gene-C9E94_RS07850;Name=C9E94_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07850;old_locus_tag=C9E94_08030
NZ_PYJR01000058.1	Protein Homology	CDS	2103	2261	.	+	0	ID=cds-WP_000480735.1;Parent=gene-C9E94_RS07850;Dbxref=GenBank:WP_000480735.1;Name=WP_000480735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460819.1;locus_tag=C9E94_RS07850;product=DUF5993 family protein;protein_id=WP_000480735.1;transl_table=11
NZ_PYJR01000058.1	RefSeq	gene	2271	2885	.	+	.	ID=gene-C9E94_RS07855;Name=C9E94_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07855;old_locus_tag=C9E94_08035
NZ_PYJR01000058.1	Protein Homology	CDS	2271	2885	.	+	0	ID=cds-WP_000848069.1;Parent=gene-C9E94_RS07855;Dbxref=GenBank:WP_000848069.1;Name=WP_000848069.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460820.1;locus_tag=C9E94_RS07855;product=disulfide bond formation protein B;protein_id=WP_000848069.1;transl_table=11
NZ_PYJR01000058.1	RefSeq	pseudogene	3212	3358	.	-	.	ID=gene-C9E94_RS23875;Name=C9E94_RS23875;end_range=3358,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23875;partial=true;pseudo=true
NZ_PYJR01000058.1	Protein Homology	CDS	3212	3358	.	-	0	ID=cds-C9E94_RS23875;Parent=gene-C9E94_RS23875;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0003700;end_range=3358,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219268.1;locus_tag=C9E94_RS23875;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
NZ_PYJR01000058.1	RefSeq	gene	3373	3519	.	+	.	ID=gene-C9E94_RS23880;Name=C9E94_RS23880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23880
NZ_PYJR01000058.1	GeneMarkS-2+	CDS	3373	3519	.	+	0	ID=cds-WP_001520350.1;Parent=gene-C9E94_RS23880;Dbxref=GenBank:WP_001520350.1;Name=WP_001520350.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS23880;product=hypothetical protein;protein_id=WP_001520350.1;transl_table=11
NZ_PYJR01000058.1	RefSeq	gene	4033	4158	.	-	.	ID=gene-C9E94_RS07870;Name=C9E94_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07870;old_locus_tag=C9E94_08050
NZ_PYJR01000058.1	Protein Homology	CDS	4033	4158	.	-	0	ID=cds-WP_000457876.1;Parent=gene-C9E94_RS07870;Dbxref=GenBank:WP_000457876.1;Name=WP_000457876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457876.1;locus_tag=C9E94_RS07870;product=hypothetical protein;protein_id=WP_000457876.1;transl_table=11
NZ_PYJR01000058.1	RefSeq	pseudogene	4149	4350	.	+	.	ID=gene-C9E94_RS23610;Name=C9E94_RS23610;end_range=4350,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23610;partial=true;pseudo=true;start_range=.,4149
NZ_PYJR01000058.1	Protein Homology	CDS	4149	4350	.	+	0	ID=cds-C9E94_RS23610;Parent=gene-C9E94_RS23610;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4350,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=C9E94_RS23610;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,4149;transl_table=11
NZ_PYJR01000058.1	RefSeq	gene	4728	4928	.	+	.	ID=gene-C9E94_RS07880;Name=pagK;gbkey=Gene;gene=pagK;gene_biotype=protein_coding;gene_synonym=pagK1;locus_tag=C9E94_RS07880;old_locus_tag=C9E94_08060
NZ_PYJR01000058.1	Protein Homology	CDS	4728	4928	.	+	0	ID=cds-WP_010989029.1;Parent=gene-C9E94_RS07880;Dbxref=GenBank:WP_010989029.1;Name=WP_010989029.1;gbkey=CDS;gene=pagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460822.1;locus_tag=C9E94_RS07880;product=vesicle-borne virulence factor PagK;protein_id=WP_010989029.1;transl_table=11
NZ_PYJR01000058.1	RefSeq	gene	5025	5541	.	-	.	ID=gene-C9E94_RS07885;Name=C9E94_RS07885;end_range=5541,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS07885;old_locus_tag=C9E94_08065;partial=true
NZ_PYJR01000058.1	Protein Homology	CDS	5025	5541	.	-	1	ID=cds-WP_217810251.1;Parent=gene-C9E94_RS07885;Dbxref=GenBank:WP_217810251.1;Name=WP_217810251.1;Ontology_term=GO:0098004;end_range=5541,.;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461522.1;locus_tag=C9E94_RS07885;partial=true;product=tail fiber assembly protein;protein_id=WP_217810251.1;transl_table=11
##sequence-region NZ_PYJR01000073.1 1 4917
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000073.1	RefSeq	region	1	4917	.	+	.	ID=NZ_PYJR01000073.1:1..4917;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000073.1	RefSeq	pseudogene	1	89	.	+	.	ID=gene-C9E94_RS09500;Name=C9E94_RS09500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS09500;old_locus_tag=C9E94_09720;partial=true;pseudo=true;start_range=.,1
NZ_PYJR01000073.1	Protein Homology	CDS	1	89	.	+	2	ID=cds-C9E94_RS09500;Parent=gene-C9E94_RS09500;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462655.1;locus_tag=C9E94_RS09500;partial=true;product=helix-turn-helix transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11
NZ_PYJR01000073.1	RefSeq	gene	164	3031	.	+	.	ID=gene-C9E94_RS09505;Name=misL;gbkey=Gene;gene=misL;gene_biotype=protein_coding;locus_tag=C9E94_RS09505;old_locus_tag=C9E94_09725
NZ_PYJR01000073.1	Protein Homology	CDS	164	3031	.	+	0	ID=cds-WP_023262402.1;Parent=gene-C9E94_RS09505;Dbxref=GenBank:WP_023262402.1;Name=WP_023262402.1;gbkey=CDS;gene=misL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462656.1;locus_tag=C9E94_RS09505;product=intestinal colonization autotransporter adhesin MisL;protein_id=WP_023262402.1;transl_table=11
NZ_PYJR01000073.1	RefSeq	gene	3126	3590	.	-	.	ID=gene-C9E94_RS09510;Name=C9E94_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09510;old_locus_tag=C9E94_09730
NZ_PYJR01000073.1	Protein Homology	CDS	3126	3590	.	-	0	ID=cds-WP_001521985.1;Parent=gene-C9E94_RS09510;Dbxref=GenBank:WP_001521985.1;Name=WP_001521985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462657.1;locus_tag=C9E94_RS09510;product=hypothetical protein;protein_id=WP_001521985.1;transl_table=11
NZ_PYJR01000073.1	RefSeq	gene	3601	4458	.	-	.	ID=gene-C9E94_RS09515;Name=C9E94_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS09515;old_locus_tag=C9E94_09735
NZ_PYJR01000073.1	Protein Homology	CDS	3601	4458	.	-	0	ID=cds-WP_001278062.1;Parent=gene-C9E94_RS09515;Dbxref=GenBank:WP_001278062.1;Name=WP_001278062.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462658.4;locus_tag=C9E94_RS09515;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001278062.1;transl_table=11
##sequence-region NZ_PYJR01000084.1 1 111900
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564615
NZ_PYJR01000084.1	RefSeq	region	1	111900	.	+	.	ID=NZ_PYJR01000084.1:1..111900;Dbxref=taxon:2564615;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Kibusi;strain=108ev;sub-species=enterica
NZ_PYJR01000084.1	RefSeq	gene	1	128	.	+	.	ID=gene-C9E94_RS10915;Name=C9E94_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10915;old_locus_tag=C9E94_11145;partial=true;start_range=.,1
NZ_PYJR01000084.1	Protein Homology	CDS	1	128	.	+	2	ID=cds-WP_137962777.1-2;Parent=gene-C9E94_RS10915;Dbxref=GenBank:WP_137962777.1;Name=WP_137962777.1;Ontology_term=GO:0006814,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462261.1;locus_tag=C9E94_RS10915;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_137962777.1;start_range=.,1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	247	945	.	+	.	ID=gene-C9E94_RS10920;Name=C9E94_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10920;old_locus_tag=C9E94_11150
NZ_PYJR01000084.1	Protein Homology	CDS	247	945	.	+	0	ID=cds-WP_001005993.1;Parent=gene-C9E94_RS10920;Dbxref=GenBank:WP_001005993.1;Name=WP_001005993.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459748.1;locus_tag=C9E94_RS10920;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_001005993.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	1325	2404	.	+	.	ID=gene-C9E94_RS10925;Name=C9E94_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10925;old_locus_tag=C9E94_11155
NZ_PYJR01000084.1	Protein Homology	CDS	1325	2404	.	+	0	ID=cds-WP_001748280.1;Parent=gene-C9E94_RS10925;Dbxref=GenBank:WP_001748280.1;Name=WP_001748280.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459749.1;locus_tag=C9E94_RS10925;product=FecCD family ABC transporter permease;protein_id=WP_001748280.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	2404	3180	.	+	.	ID=gene-C9E94_RS10930;Name=C9E94_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10930;old_locus_tag=C9E94_11160
NZ_PYJR01000084.1	Protein Homology	CDS	2404	3180	.	+	0	ID=cds-WP_021000081.1;Parent=gene-C9E94_RS10930;Dbxref=GenBank:WP_021000081.1;Name=WP_021000081.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459750.1;locus_tag=C9E94_RS10930;product=ABC transporter ATP-binding protein;protein_id=WP_021000081.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	3271	4023	.	-	.	ID=gene-C9E94_RS10935;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=C9E94_RS10935;old_locus_tag=C9E94_11165
NZ_PYJR01000084.1	Protein Homology	CDS	3271	4023	.	-	0	ID=cds-WP_000301556.1;Parent=gene-C9E94_RS10935;Dbxref=GenBank:WP_000301556.1;Name=WP_000301556.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=C9E94_RS10935;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_000301556.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	4247	5287	.	-	.	ID=gene-C9E94_RS10940;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=C9E94_RS10940;old_locus_tag=C9E94_11175
NZ_PYJR01000084.1	Protein Homology	CDS	4247	5287	.	-	0	ID=cds-WP_000931428.1;Parent=gene-C9E94_RS10940;Dbxref=GenBank:WP_000931428.1;Name=WP_000931428.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459752.1;locus_tag=C9E94_RS10940;product=galactose-1-epimerase;protein_id=WP_000931428.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	5281	6429	.	-	.	ID=gene-C9E94_RS10945;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=C9E94_RS10945;old_locus_tag=C9E94_11180
NZ_PYJR01000084.1	Protein Homology	CDS	5281	6429	.	-	0	ID=cds-WP_135401017.1;Parent=gene-C9E94_RS10945;Dbxref=GenBank:WP_135401017.1;Name=WP_135401017.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=C9E94_RS10945;product=galactokinase;protein_id=WP_135401017.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	6432	7478	.	-	.	ID=gene-C9E94_RS10950;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=C9E94_RS10950;old_locus_tag=C9E94_11185
NZ_PYJR01000084.1	Protein Homology	CDS	6432	7478	.	-	0	ID=cds-WP_000187471.1;Parent=gene-C9E94_RS10950;Dbxref=GenBank:WP_000187471.1;Name=WP_000187471.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459754.1;locus_tag=C9E94_RS10950;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_000187471.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	7489	8505	.	-	.	ID=gene-C9E94_RS10955;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=C9E94_RS10955;old_locus_tag=C9E94_11190
NZ_PYJR01000084.1	Protein Homology	CDS	7489	8505	.	-	0	ID=cds-WP_001265465.1;Parent=gene-C9E94_RS10955;Dbxref=GenBank:WP_001265465.1;Name=WP_001265465.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459755.1;locus_tag=C9E94_RS10955;product=UDP-glucose 4-epimerase GalE;protein_id=WP_001265465.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	8728	9636	.	-	.	ID=gene-C9E94_RS10960;Name=C9E94_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10960;old_locus_tag=C9E94_11195
NZ_PYJR01000084.1	Protein Homology	CDS	8728	9636	.	-	0	ID=cds-WP_000885512.1;Parent=gene-C9E94_RS10960;Dbxref=GenBank:WP_000885512.1;Name=WP_000885512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459756.1;locus_tag=C9E94_RS10960;product=DUF2167 domain-containing protein;protein_id=WP_000885512.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	9807	11282	.	-	.	ID=gene-C9E94_RS10965;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=C9E94_RS10965;old_locus_tag=C9E94_11200
NZ_PYJR01000084.1	Protein Homology	CDS	9807	11282	.	-	0	ID=cds-WP_079943157.1;Parent=gene-C9E94_RS10965;Dbxref=GenBank:WP_079943157.1;Name=WP_079943157.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459757.1;locus_tag=C9E94_RS10965;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_079943157.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	11350	12138	.	-	.	ID=gene-C9E94_RS10970;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=C9E94_RS10970;old_locus_tag=C9E94_11205
NZ_PYJR01000084.1	Protein Homology	CDS	11350	12138	.	-	0	ID=cds-WP_001147418.1;Parent=gene-C9E94_RS10970;Dbxref=GenBank:WP_001147418.1;Name=WP_001147418.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459758.1;locus_tag=C9E94_RS10970;product=molybdenum-dependent transcriptional regulator;protein_id=WP_001147418.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	12267	12416	.	+	.	ID=gene-C9E94_RS10975;Name=C9E94_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10975;old_locus_tag=C9E94_11210
NZ_PYJR01000084.1	Protein Homology	CDS	12267	12416	.	+	0	ID=cds-WP_000891513.1;Parent=gene-C9E94_RS10975;Dbxref=GenBank:WP_000891513.1;Name=WP_000891513.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459759.1;locus_tag=C9E94_RS10975;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WP_000891513.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	12583	13356	.	+	.	ID=gene-C9E94_RS10980;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=C9E94_RS10980;old_locus_tag=C9E94_11215
NZ_PYJR01000084.1	Protein Homology	CDS	12583	13356	.	+	0	ID=cds-WP_000951420.1;Parent=gene-C9E94_RS10980;Dbxref=GenBank:WP_000951420.1;Name=WP_000951420.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459760.1;locus_tag=C9E94_RS10980;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_000951420.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	13356	14045	.	+	.	ID=gene-C9E94_RS10985;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=C9E94_RS10985;old_locus_tag=C9E94_11220
NZ_PYJR01000084.1	Protein Homology	CDS	13356	14045	.	+	0	ID=cds-WP_000604026.1;Parent=gene-C9E94_RS10985;Dbxref=GenBank:WP_000604026.1;Name=WP_000604026.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459761.1;locus_tag=C9E94_RS10985;product=molybdate ABC transporter permease subunit;protein_id=WP_000604026.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	14048	15106	.	+	.	ID=gene-C9E94_RS10990;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=C9E94_RS10990;old_locus_tag=C9E94_11225
NZ_PYJR01000084.1	Protein Homology	CDS	14048	15106	.	+	0	ID=cds-WP_000891710.1;Parent=gene-C9E94_RS10990;Dbxref=GenBank:WP_000891710.1;Name=WP_000891710.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459762.1;locus_tag=C9E94_RS10990;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_000891710.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	15107	15925	.	-	.	ID=gene-C9E94_RS10995;Name=C9E94_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS10995;old_locus_tag=C9E94_11230
NZ_PYJR01000084.1	Protein Homology	CDS	15107	15925	.	-	0	ID=cds-WP_031622333.1;Parent=gene-C9E94_RS10995;Dbxref=GenBank:WP_031622333.1;Name=WP_031622333.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459763.1;locus_tag=C9E94_RS10995;product=pyridoxal phosphatase;protein_id=WP_031622333.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	16089	17084	.	+	.	ID=gene-C9E94_RS11000;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;gene_synonym=ybhE;locus_tag=C9E94_RS11000;old_locus_tag=C9E94_11235
NZ_PYJR01000084.1	Protein Homology	CDS	16089	17084	.	+	0	ID=cds-WP_000815468.1;Parent=gene-C9E94_RS11000;Dbxref=GenBank:WP_000815468.1;Name=WP_000815468.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459764.1;locus_tag=C9E94_RS11000;product=6-phosphogluconolactonase;protein_id=WP_000815468.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	17228	18511	.	-	.	ID=gene-C9E94_RS11005;Name=C9E94_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11005;old_locus_tag=C9E94_11240
NZ_PYJR01000084.1	Protein Homology	CDS	17228	18511	.	-	0	ID=cds-WP_001094766.1;Parent=gene-C9E94_RS11005;Dbxref=GenBank:WP_001094766.1;Name=WP_001094766.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459765.1;locus_tag=C9E94_RS11005;product=putative acyl-CoA thioester hydrolase;protein_id=WP_001094766.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	18749	19972	.	+	.	ID=gene-C9E94_RS11010;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=C9E94_RS11010;old_locus_tag=C9E94_11245
NZ_PYJR01000084.1	Protein Homology	CDS	18749	19972	.	+	0	ID=cds-WP_094889117.1;Parent=gene-C9E94_RS11010;Dbxref=GenBank:WP_094889117.1;Name=WP_094889117.1;Ontology_term=GO:0019556,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459766.1;locus_tag=C9E94_RS11010;product=imidazolonepropionase;protein_id=WP_094889117.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	19969	20910	.	+	.	ID=gene-C9E94_RS11015;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=C9E94_RS11015;old_locus_tag=C9E94_11250
NZ_PYJR01000084.1	Protein Homology	CDS	19969	20910	.	+	0	ID=cds-WP_000195688.1;Parent=gene-C9E94_RS11015;Dbxref=GenBank:WP_000195688.1;Name=WP_000195688.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459767.1;locus_tag=C9E94_RS11015;product=formimidoylglutamase;protein_id=WP_000195688.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	20955	21680	.	+	.	ID=gene-C9E94_RS11020;Name=C9E94_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11020;old_locus_tag=C9E94_11255
NZ_PYJR01000084.1	Protein Homology	CDS	20955	21680	.	+	0	ID=cds-WP_000287416.1;Parent=gene-C9E94_RS11020;Dbxref=GenBank:WP_000287416.1;Name=WP_000287416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459768.1;locus_tag=C9E94_RS11020;product=histidine utilization repressor;protein_id=WP_000287416.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	21877	23562	.	+	.	ID=gene-C9E94_RS11025;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=C9E94_RS11025;old_locus_tag=C9E94_11260
NZ_PYJR01000084.1	Protein Homology	CDS	21877	23562	.	+	0	ID=cds-WP_135401018.1;Parent=gene-C9E94_RS11025;Dbxref=GenBank:WP_135401018.1;Name=WP_135401018.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441920.1;locus_tag=C9E94_RS11025;product=urocanate hydratase;protein_id=WP_135401018.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	23564	25084	.	+	.	ID=gene-C9E94_RS11030;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=C9E94_RS11030;old_locus_tag=C9E94_11265
NZ_PYJR01000084.1	Protein Homology	CDS	23564	25084	.	+	0	ID=cds-WP_001095242.1;Parent=gene-C9E94_RS11030;Dbxref=GenBank:WP_001095242.1;Name=WP_001095242.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459769.1;locus_tag=C9E94_RS11030;product=histidine ammonia-lyase;protein_id=WP_001095242.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	25169	25645	.	-	.	ID=gene-C9E94_RS11035;Name=C9E94_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11035;old_locus_tag=C9E94_11270
NZ_PYJR01000084.1	Protein Homology	CDS	25169	25645	.	-	0	ID=cds-WP_000767403.1;Parent=gene-C9E94_RS11035;Dbxref=GenBank:WP_000767403.1;Name=WP_000767403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459770.1;locus_tag=C9E94_RS11035;product=kinase inhibitor;protein_id=WP_000767403.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	25703	26992	.	-	.	ID=gene-C9E94_RS11040;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=C9E94_RS11040;old_locus_tag=C9E94_11275
NZ_PYJR01000084.1	Protein Homology	CDS	25703	26992	.	-	0	ID=cds-WP_135401019.1;Parent=gene-C9E94_RS11040;Dbxref=GenBank:WP_135401019.1;Name=WP_135401019.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459771.1;locus_tag=C9E94_RS11040;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_135401019.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	27079	28119	.	+	.	ID=gene-C9E94_RS11045;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=C9E94_RS11045;old_locus_tag=C9E94_11280
NZ_PYJR01000084.1	Protein Homology	CDS	27079	28119	.	+	0	ID=cds-WP_000090729.1;Parent=gene-C9E94_RS11045;Dbxref=GenBank:WP_000090729.1;Name=WP_000090729.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459772.1;locus_tag=C9E94_RS11045;product=biotin synthase BioB;protein_id=WP_000090729.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	28116	29273	.	+	.	ID=gene-C9E94_RS11050;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=C9E94_RS11050;old_locus_tag=C9E94_11285
NZ_PYJR01000084.1	Protein Homology	CDS	28116	29273	.	+	0	ID=cds-WP_000118941.1;Parent=gene-C9E94_RS11050;Dbxref=GenBank:WP_000118941.1;Name=WP_000118941.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459773.1;locus_tag=C9E94_RS11050;product=8-amino-7-oxononanoate synthase;protein_id=WP_000118941.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	29257	30012	.	+	.	ID=gene-C9E94_RS11055;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=C9E94_RS11055;old_locus_tag=C9E94_11290
NZ_PYJR01000084.1	Protein Homology	CDS	29257	30012	.	+	0	ID=cds-WP_000079910.1;Parent=gene-C9E94_RS11055;Dbxref=GenBank:WP_000079910.1;Name=WP_000079910.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459774.1;locus_tag=C9E94_RS11055;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_000079910.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	30005	30691	.	+	.	ID=gene-C9E94_RS11060;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=C9E94_RS11060;old_locus_tag=C9E94_11295
NZ_PYJR01000084.1	Protein Homology	CDS	30005	30691	.	+	0	ID=cds-WP_000167219.1;Parent=gene-C9E94_RS11060;Dbxref=GenBank:WP_000167219.1;Name=WP_000167219.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459775.1;locus_tag=C9E94_RS11060;product=dethiobiotin synthase;protein_id=WP_000167219.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	31342	33363	.	+	.	ID=gene-C9E94_RS11070;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=C9E94_RS11070;old_locus_tag=C9E94_11305
NZ_PYJR01000084.1	Protein Homology	CDS	31342	33363	.	+	0	ID=cds-WP_000042502.1;Parent=gene-C9E94_RS11070;Dbxref=GenBank:WP_000042502.1;Name=WP_000042502.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=C9E94_RS11070;product=excinuclease ABC subunit UvrB;protein_id=WP_000042502.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	pseudogene	33672	33846	.	+	.	ID=gene-C9E94_RS23630;Name=C9E94_RS23630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23630;pseudo=true
NZ_PYJR01000084.1	Protein Homology	CDS	33672	33846	.	+	0	ID=cds-C9E94_RS23630;Parent=gene-C9E94_RS23630;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447236.1;locus_tag=C9E94_RS23630;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	33854	36151	.	+	.	ID=gene-C9E94_RS11075;Name=slrP;gbkey=Gene;gene=slrP;gene_biotype=protein_coding;locus_tag=C9E94_RS11075;old_locus_tag=C9E94_11310
NZ_PYJR01000084.1	Protein Homology	CDS	33854	36151	.	+	0	ID=cds-WP_135401020.1;Parent=gene-C9E94_RS11075;Dbxref=GenBank:WP_135401020.1;Name=WP_135401020.1;gbkey=CDS;gene=slrP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459778.1;locus_tag=C9E94_RS11075;product=SPI-1 type III secretion system effector E3 ubiquitin transferase SlrP;protein_id=WP_135401020.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	36243	37151	.	-	.	ID=gene-C9E94_RS11080;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=C9E94_RS11080;old_locus_tag=C9E94_11315
NZ_PYJR01000084.1	Protein Homology	CDS	36243	37151	.	-	0	ID=cds-WP_001246031.1;Parent=gene-C9E94_RS11080;Dbxref=GenBank:WP_001246031.1;Name=WP_001246031.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459779.1;locus_tag=C9E94_RS11080;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_001246031.1;transl_table=11
NZ_PYJR01000084.1	cmsearch	riboswitch	37416	37560	.	+	.	ID=id-NZ_PYJR01000084.1:37416..37560;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PYJR01000084.1	RefSeq	gene	37548	38537	.	+	.	ID=gene-C9E94_RS11085;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=C9E94_RS11085;old_locus_tag=C9E94_11320
NZ_PYJR01000084.1	Protein Homology	CDS	37548	38537	.	+	0	ID=cds-WP_023193982.1;Parent=gene-C9E94_RS11085;Dbxref=GenBank:WP_023193982.1;Name=WP_023193982.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459780.1;locus_tag=C9E94_RS11085;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_023193982.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	38559	39071	.	+	.	ID=gene-C9E94_RS11090;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=C9E94_RS11090;old_locus_tag=C9E94_11325
NZ_PYJR01000084.1	Protein Homology	CDS	38559	39071	.	+	0	ID=cds-WP_000084604.1;Parent=gene-C9E94_RS11090;Dbxref=GenBank:WP_000084604.1;Name=WP_000084604.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=C9E94_RS11090;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_000084604.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	39074	39559	.	+	.	ID=gene-C9E94_RS11095;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=C9E94_RS11095;old_locus_tag=C9E94_11330
NZ_PYJR01000084.1	Protein Homology	CDS	39074	39559	.	+	0	ID=cds-WP_000080894.1;Parent=gene-C9E94_RS11095;Dbxref=GenBank:WP_000080894.1;Name=WP_000080894.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459782.1;locus_tag=C9E94_RS11095;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_000080894.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	39552	39797	.	+	.	ID=gene-C9E94_RS11100;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=C9E94_RS11100;old_locus_tag=C9E94_11335
NZ_PYJR01000084.1	Protein Homology	CDS	39552	39797	.	+	0	ID=cds-WP_000598596.1;Parent=gene-C9E94_RS11100;Dbxref=GenBank:WP_000598596.1;Name=WP_000598596.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308889.1;locus_tag=C9E94_RS11100;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_000598596.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	39799	40251	.	+	.	ID=gene-C9E94_RS11105;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=C9E94_RS11105;old_locus_tag=C9E94_11340
NZ_PYJR01000084.1	Protein Homology	CDS	39799	40251	.	+	0	ID=cds-WP_000545202.1;Parent=gene-C9E94_RS11105;Dbxref=GenBank:WP_000545202.1;Name=WP_000545202.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459784.1;locus_tag=C9E94_RS11105;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_000545202.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	40299	41003	.	+	.	ID=gene-C9E94_RS11110;Name=C9E94_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11110;old_locus_tag=C9E94_11345
NZ_PYJR01000084.1	Protein Homology	CDS	40299	41003	.	+	0	ID=cds-WP_000373611.1;Parent=gene-C9E94_RS11110;Dbxref=GenBank:WP_000373611.1;Name=WP_000373611.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459785.1;locus_tag=C9E94_RS11110;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000373611.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	41149	41856	.	+	.	ID=gene-C9E94_RS11115;Name=C9E94_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11115;old_locus_tag=C9E94_11355
NZ_PYJR01000084.1	Protein Homology	CDS	41149	41856	.	+	0	ID=cds-WP_050067651.1;Parent=gene-C9E94_RS11115;Dbxref=GenBank:WP_050067651.1;Name=WP_050067651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459786.1;locus_tag=C9E94_RS11115;product=Bax inhibitor-1 family protein;protein_id=WP_050067651.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	41880	42488	.	+	.	ID=gene-C9E94_RS11120;Name=C9E94_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11120;old_locus_tag=C9E94_11360
NZ_PYJR01000084.1	Protein Homology	CDS	41880	42488	.	+	0	ID=cds-WP_010988984.1;Parent=gene-C9E94_RS11120;Dbxref=GenBank:WP_010988984.1;Name=WP_010988984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459787.1;locus_tag=C9E94_RS11120;product=membrane protein;protein_id=WP_010988984.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	42496	43056	.	+	.	ID=gene-C9E94_RS11125;Name=C9E94_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11125;old_locus_tag=C9E94_11365
NZ_PYJR01000084.1	Protein Homology	CDS	42496	43056	.	+	0	ID=cds-WP_079842073.1;Parent=gene-C9E94_RS11125;Dbxref=GenBank:WP_079842073.1;Name=WP_079842073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459788.1;locus_tag=C9E94_RS11125;product=hypothetical protein;protein_id=WP_079842073.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	43059	44021	.	-	.	ID=gene-C9E94_RS11130;Name=C9E94_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11130;old_locus_tag=C9E94_11370
NZ_PYJR01000084.1	Protein Homology	CDS	43059	44021	.	-	0	ID=cds-WP_001129815.1;Parent=gene-C9E94_RS11130;Dbxref=GenBank:WP_001129815.1;Name=WP_001129815.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459789.1;locus_tag=C9E94_RS11130;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;protein_id=WP_001129815.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	44021	45262	.	-	.	ID=gene-C9E94_RS11135;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=C9E94_RS11135;old_locus_tag=C9E94_11375
NZ_PYJR01000084.1	Protein Homology	CDS	44021	45262	.	-	0	ID=cds-WP_000649639.1;Parent=gene-C9E94_RS11135;Dbxref=GenBank:WP_000649639.1;Name=WP_000649639.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459790.1;locus_tag=C9E94_RS11135;product=cardiolipin synthase ClsB;protein_id=WP_000649639.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	45259	46017	.	-	.	ID=gene-C9E94_RS11140;Name=C9E94_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11140;old_locus_tag=C9E94_11380
NZ_PYJR01000084.1	Protein Homology	CDS	45259	46017	.	-	0	ID=cds-WP_135401021.1;Parent=gene-C9E94_RS11140;Dbxref=GenBank:WP_135401021.1;Name=WP_135401021.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459791.1;locus_tag=C9E94_RS11140;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_135401021.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	46150	46560	.	+	.	ID=gene-C9E94_RS11145;Name=C9E94_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11145;old_locus_tag=C9E94_11385
NZ_PYJR01000084.1	Protein Homology	CDS	46150	46560	.	+	0	ID=cds-WP_000871970.1;Parent=gene-C9E94_RS11145;Dbxref=GenBank:WP_000871970.1;Name=WP_000871970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459792.1;locus_tag=C9E94_RS11145;product=YbhQ family protein;protein_id=WP_000871970.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	46522	47628	.	-	.	ID=gene-C9E94_RS11150;Name=C9E94_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11150;old_locus_tag=C9E94_11390
NZ_PYJR01000084.1	Protein Homology	CDS	46522	47628	.	-	0	ID=cds-WP_000469050.1;Parent=gene-C9E94_RS11150;Dbxref=GenBank:WP_000469050.1;Name=WP_000469050.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459793.1;locus_tag=C9E94_RS11150;product=ABC transporter permease;protein_id=WP_000469050.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	47744	48874	.	-	.	ID=gene-C9E94_RS11155;Name=C9E94_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11155;old_locus_tag=C9E94_11395
NZ_PYJR01000084.1	Protein Homology	CDS	47744	48874	.	-	0	ID=cds-WP_000045765.1;Parent=gene-C9E94_RS11155;Dbxref=GenBank:WP_000045765.1;Name=WP_000045765.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459794.1;locus_tag=C9E94_RS11155;product=ABC transporter permease;protein_id=WP_000045765.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	48867	50603	.	-	.	ID=gene-C9E94_RS11160;Name=C9E94_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11160;old_locus_tag=C9E94_11400
NZ_PYJR01000084.1	Protein Homology	CDS	48867	50603	.	-	0	ID=cds-WP_135401022.1;Parent=gene-C9E94_RS11160;Dbxref=GenBank:WP_135401022.1;Name=WP_135401022.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459795.1;locus_tag=C9E94_RS11160;product=ATP-binding cassette domain-containing protein;protein_id=WP_135401022.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	50596	51591	.	-	.	ID=gene-C9E94_RS11165;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=C9E94_RS11165;old_locus_tag=C9E94_11405
NZ_PYJR01000084.1	Protein Homology	CDS	50596	51591	.	-	0	ID=cds-WP_000743436.1;Parent=gene-C9E94_RS11165;Dbxref=GenBank:WP_000743436.1;Name=WP_000743436.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459796.1;locus_tag=C9E94_RS11165;product=secretion protein HlyD;protein_id=WP_000743436.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	51591	52265	.	-	.	ID=gene-C9E94_RS11170;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=C9E94_RS11170;old_locus_tag=C9E94_11410
NZ_PYJR01000084.1	Protein Homology	CDS	51591	52265	.	-	0	ID=cds-WP_001025254.1;Parent=gene-C9E94_RS11170;Dbxref=GenBank:WP_001025254.1;Name=WP_001025254.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459797.1;locus_tag=C9E94_RS11170;product=transcriptional regulator CecR;protein_id=WP_001025254.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	52495	53856	.	+	.	ID=gene-C9E94_RS11175;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=C9E94_RS11175;old_locus_tag=C9E94_11415
NZ_PYJR01000084.1	Protein Homology	CDS	52495	53856	.	+	0	ID=cds-WP_000007065.1;Parent=gene-C9E94_RS11175;Dbxref=GenBank:WP_000007065.1;Name=WP_000007065.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459798.1;locus_tag=C9E94_RS11175;product=ATP-dependent RNA helicase RhlE;protein_id=WP_000007065.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	54064	56208	.	+	.	ID=gene-C9E94_RS11180;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=C9E94_RS11180;old_locus_tag=C9E94_11420
NZ_PYJR01000084.1	Protein Homology	CDS	54064	56208	.	+	0	ID=cds-WP_001218630.1;Parent=gene-C9E94_RS11180;Dbxref=GenBank:WP_001218630.1;Name=WP_001218630.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=C9E94_RS11180;product=ATP-dependent DNA helicase DinG;protein_id=WP_001218630.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	56238	57212	.	+	.	ID=gene-C9E94_RS11185;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=C9E94_RS11185;old_locus_tag=C9E94_11425
NZ_PYJR01000084.1	Protein Homology	CDS	56238	57212	.	+	0	ID=cds-WP_000386477.1;Parent=gene-C9E94_RS11185;Dbxref=GenBank:WP_000386477.1;Name=WP_000386477.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459800.1;locus_tag=C9E94_RS11185;product=DNA-binding protein YbiB;protein_id=WP_000386477.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	57368	57628	.	-	.	ID=gene-C9E94_RS11190;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=C9E94_RS11190;old_locus_tag=C9E94_11430
NZ_PYJR01000084.1	Protein Homology	CDS	57368	57628	.	-	0	ID=cds-WP_000849089.1;Parent=gene-C9E94_RS11190;Dbxref=GenBank:WP_000849089.1;Name=WP_000849089.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459801.1;locus_tag=C9E94_RS11190;product=DUF1471 family protein YbiJ;protein_id=WP_000849089.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	57913	58179	.	-	.	ID=gene-C9E94_RS11195;Name=C9E94_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11195;old_locus_tag=C9E94_11435
NZ_PYJR01000084.1	Protein Homology	CDS	57913	58179	.	-	0	ID=cds-WP_000146330.1;Parent=gene-C9E94_RS11195;Dbxref=GenBank:WP_000146330.1;Name=WP_000146330.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459802.1;locus_tag=C9E94_RS11195;product=DksA/TraR family C4-type zinc finger protein;protein_id=WP_000146330.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	58384	59310	.	+	.	ID=gene-C9E94_RS11200;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=C9E94_RS11200;old_locus_tag=C9E94_11440
NZ_PYJR01000084.1	Protein Homology	CDS	58384	59310	.	+	0	ID=cds-WP_001275962.1;Parent=gene-C9E94_RS11200;Dbxref=GenBank:WP_001275962.1;Name=WP_001275962.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459803.1;locus_tag=C9E94_RS11200;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_001275962.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	59307	61529	.	-	.	ID=gene-C9E94_RS11205;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=C9E94_RS11205;old_locus_tag=C9E94_11445
NZ_PYJR01000084.1	Protein Homology	CDS	59307	61529	.	-	0	ID=cds-WP_001267704.1;Parent=gene-C9E94_RS11205;Dbxref=GenBank:WP_001267704.1;Name=WP_001267704.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459804.1;locus_tag=C9E94_RS11205;product=mechanosensitive channel protein;protein_id=WP_001267704.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	61648	62370	.	-	.	ID=gene-C9E94_RS11210;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=C9E94_RS11210;old_locus_tag=C9E94_11450
NZ_PYJR01000084.1	Protein Homology	CDS	61648	62370	.	-	0	ID=cds-WP_000569093.1;Parent=gene-C9E94_RS11210;Dbxref=GenBank:WP_000569093.1;Name=WP_000569093.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=C9E94_RS11210;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_000569093.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	62367	63026	.	-	.	ID=gene-C9E94_RS11215;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=C9E94_RS11215;old_locus_tag=C9E94_11455
NZ_PYJR01000084.1	Protein Homology	CDS	62367	63026	.	-	0	ID=cds-WP_001159076.1;Parent=gene-C9E94_RS11215;Dbxref=GenBank:WP_001159076.1;Name=WP_001159076.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=C9E94_RS11215;product=glutamine ABC transporter permease GlnP;protein_id=WP_001159076.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	63172	63918	.	-	.	ID=gene-C9E94_RS11220;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=C9E94_RS11220;old_locus_tag=C9E94_11460
NZ_PYJR01000084.1	Protein Homology	CDS	63172	63918	.	-	0	ID=cds-WP_000838671.1;Parent=gene-C9E94_RS11220;Dbxref=GenBank:WP_000838671.1;Name=WP_000838671.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=C9E94_RS11220;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_000838671.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	64393	64896	.	-	.	ID=gene-C9E94_RS11225;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=C9E94_RS11225;old_locus_tag=C9E94_11465
NZ_PYJR01000084.1	Protein Homology	CDS	64393	64896	.	-	0	ID=cds-WP_000100805.1;Parent=gene-C9E94_RS11225;Dbxref=GenBank:WP_000100805.1;Name=WP_000100805.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=C9E94_RS11225;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100805.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	65199	66086	.	-	.	ID=gene-C9E94_RS11230;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=C9E94_RS11230;old_locus_tag=C9E94_11470
NZ_PYJR01000084.1	Protein Homology	CDS	65199	66086	.	-	0	ID=cds-WP_001119554.1;Parent=gene-C9E94_RS11230;Dbxref=GenBank:WP_001119554.1;Name=WP_001119554.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459809.1;locus_tag=C9E94_RS11230;product=threonine/homoserine exporter RhtA;protein_id=WP_001119554.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	66440	66955	.	+	.	ID=gene-C9E94_RS11235;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=C9E94_RS11235;old_locus_tag=C9E94_11475
NZ_PYJR01000084.1	Protein Homology	CDS	66440	66955	.	+	0	ID=cds-WP_000716763.1;Parent=gene-C9E94_RS11235;Dbxref=GenBank:WP_000716763.1;Name=WP_000716763.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459810.1;locus_tag=C9E94_RS11235;product=outer membrane protein OmpX;protein_id=WP_000716763.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	67018	68598	.	-	.	ID=gene-C9E94_RS11240;Name=C9E94_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11240;old_locus_tag=C9E94_11480
NZ_PYJR01000084.1	Protein Homology	CDS	67018	68598	.	-	0	ID=cds-WP_001089327.1;Parent=gene-C9E94_RS11240;Dbxref=GenBank:WP_001089327.1;Name=WP_001089327.1;Ontology_term=GO:0009244,GO:1900727,GO:0016776;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459811.1;locus_tag=C9E94_RS11240;product=phosphoethanolamine transferase;protein_id=WP_001089327.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	68863	68991	.	-	.	ID=gene-C9E94_RS11245;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=C9E94_RS11245;old_locus_tag=C9E94_11485
NZ_PYJR01000084.1	Protein Homology	CDS	68863	68991	.	-	0	ID=cds-WP_001001755.1;Parent=gene-C9E94_RS11245;Dbxref=GenBank:WP_001001755.1;Name=WP_001001755.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=C9E94_RS11245;product=manganase accumulation protein MntS;protein_id=WP_001001755.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	69177	69650	.	+	.	ID=gene-C9E94_RS11250;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=C9E94_RS11250;old_locus_tag=C9E94_11490
NZ_PYJR01000084.1	Protein Homology	CDS	69177	69650	.	+	0	ID=cds-WP_000533542.1;Parent=gene-C9E94_RS11250;Dbxref=GenBank:WP_000533542.1;Name=WP_000533542.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459812.1;locus_tag=C9E94_RS11250;product=manganese-binding transcriptional regulator MntR;protein_id=WP_000533542.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	69647	70759	.	+	.	ID=gene-C9E94_RS11255;Name=C9E94_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11255;old_locus_tag=C9E94_11495
NZ_PYJR01000084.1	Protein Homology	CDS	69647	70759	.	+	0	ID=cds-WP_000050089.1;Parent=gene-C9E94_RS11255;Dbxref=GenBank:WP_000050089.1;Name=WP_000050089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459813.1;locus_tag=C9E94_RS11255;product=anion transporter;protein_id=WP_000050089.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	70803	71723	.	-	.	ID=gene-C9E94_RS11260;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=C9E94_RS11260;old_locus_tag=C9E94_11500
NZ_PYJR01000084.1	Protein Homology	CDS	70803	71723	.	-	0	ID=cds-WP_001056404.1;Parent=gene-C9E94_RS11260;Dbxref=GenBank:WP_001056404.1;Name=WP_001056404.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459814.1;locus_tag=C9E94_RS11260;product=L%2CD-transpeptidase;protein_id=WP_001056404.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	71943	73538	.	+	.	ID=gene-C9E94_RS11265;Name=C9E94_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11265;old_locus_tag=C9E94_11505
NZ_PYJR01000084.1	Protein Homology	CDS	71943	73538	.	+	0	ID=cds-WP_000961480.1;Parent=gene-C9E94_RS11265;Dbxref=GenBank:WP_000961480.1;Name=WP_000961480.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961428.1;locus_tag=C9E94_RS11265;product=ABC-F family ATPase;protein_id=WP_000961480.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	73660	74925	.	-	.	ID=gene-C9E94_RS11270;Name=C9E94_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11270;old_locus_tag=C9E94_11510
NZ_PYJR01000084.1	Protein Homology	CDS	73660	74925	.	-	0	ID=cds-WP_000210957.1;Parent=gene-C9E94_RS11270;Dbxref=GenBank:WP_000210957.1;Name=WP_000210957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459818.1;locus_tag=C9E94_RS11270;product=DUF1479 domain-containing protein;protein_id=WP_000210957.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	75187	75996	.	+	.	ID=gene-C9E94_RS11275;Name=C9E94_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11275;old_locus_tag=C9E94_11515
NZ_PYJR01000084.1	Protein Homology	CDS	75187	75996	.	+	0	ID=cds-WP_000217910.1;Parent=gene-C9E94_RS11275;Dbxref=GenBank:WP_000217910.1;Name=WP_000217910.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459819.1;locus_tag=C9E94_RS11275;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000217910.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	76074	78506	.	-	.	ID=gene-C9E94_RS11280;Name=C9E94_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11280;old_locus_tag=C9E94_11520
NZ_PYJR01000084.1	Protein Homology	CDS	76074	78506	.	-	0	ID=cds-WP_135401023.1;Parent=gene-C9E94_RS11280;Dbxref=GenBank:WP_135401023.1;Name=WP_135401023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459820.1;locus_tag=C9E94_RS11280;product=glycyl radical protein;protein_id=WP_135401023.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	78512	79411	.	-	.	ID=gene-C9E94_RS11285;Name=C9E94_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11285;old_locus_tag=C9E94_11525
NZ_PYJR01000084.1	Protein Homology	CDS	78512	79411	.	-	0	ID=cds-WP_135401024.1;Parent=gene-C9E94_RS11285;Dbxref=GenBank:WP_135401024.1;Name=WP_135401024.1;Ontology_term=GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459821.1;locus_tag=C9E94_RS11285;product=glycyl-radical enzyme activating protein;protein_id=WP_135401024.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	79689	80438	.	-	.	ID=gene-C9E94_RS11290;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=C9E94_RS11290;old_locus_tag=C9E94_11530
NZ_PYJR01000084.1	Protein Homology	CDS	79689	80438	.	-	0	ID=cds-WP_135401025.1;Parent=gene-C9E94_RS11290;Dbxref=GenBank:WP_135401025.1;Name=WP_135401025.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459822.1;locus_tag=C9E94_RS11290;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_135401025.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	80438	81673	.	-	.	ID=gene-C9E94_RS11295;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=C9E94_RS11295;old_locus_tag=C9E94_11535
NZ_PYJR01000084.1	Protein Homology	CDS	80438	81673	.	-	0	ID=cds-WP_000395792.1;Parent=gene-C9E94_RS11295;Dbxref=GenBank:WP_000395792.1;Name=WP_000395792.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308932.1;locus_tag=C9E94_RS11295;product=molybdopterin molybdotransferase MoeA;protein_id=WP_000395792.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	81877	82818	.	+	.	ID=gene-C9E94_RS11300;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=C9E94_RS11300;old_locus_tag=C9E94_11540
NZ_PYJR01000084.1	Protein Homology	CDS	81877	82818	.	+	0	ID=cds-WP_001030503.1;Parent=gene-C9E94_RS11300;Dbxref=GenBank:WP_001030503.1;Name=WP_001030503.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459824.1;locus_tag=C9E94_RS11300;product=beta-aspartyl-peptidase;protein_id=WP_001030503.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	82829	84700	.	+	.	ID=gene-C9E94_RS11305;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=C9E94_RS11305;old_locus_tag=C9E94_11545
NZ_PYJR01000084.1	Protein Homology	CDS	82829	84700	.	+	0	ID=cds-WP_135401026.1;Parent=gene-C9E94_RS11305;Dbxref=GenBank:WP_135401026.1;Name=WP_135401026.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459825.1;locus_tag=C9E94_RS11305;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_135401026.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	84733	86271	.	+	.	ID=gene-C9E94_RS11310;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=C9E94_RS11310;old_locus_tag=C9E94_11550
NZ_PYJR01000084.1	Protein Homology	CDS	84733	86271	.	+	0	ID=cds-WP_000191440.1;Parent=gene-C9E94_RS11310;Dbxref=GenBank:WP_000191440.1;Name=WP_000191440.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459826.1;locus_tag=C9E94_RS11310;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_000191440.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	86332	87252	.	+	.	ID=gene-C9E94_RS11315;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=C9E94_RS11315;old_locus_tag=C9E94_11555
NZ_PYJR01000084.1	Protein Homology	CDS	86332	87252	.	+	0	ID=cds-WP_000936066.1;Parent=gene-C9E94_RS11315;Dbxref=GenBank:WP_000936066.1;Name=WP_000936066.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459827.1;locus_tag=C9E94_RS11315;product=glutathione ABC transporter permease GsiC;protein_id=WP_000936066.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	87255	88166	.	+	.	ID=gene-C9E94_RS11320;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=C9E94_RS11320;old_locus_tag=C9E94_11560
NZ_PYJR01000084.1	Protein Homology	CDS	87255	88166	.	+	0	ID=cds-WP_001236024.1;Parent=gene-C9E94_RS11320;Dbxref=GenBank:WP_001236024.1;Name=WP_001236024.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459828.1;locus_tag=C9E94_RS11320;product=glutathione ABC transporter permease GsiD;protein_id=WP_001236024.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	88257	89582	.	-	.	ID=gene-C9E94_RS11325;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=C9E94_RS11325;old_locus_tag=C9E94_11565
NZ_PYJR01000084.1	Protein Homology	CDS	88257	89582	.	-	0	ID=cds-WP_000073317.1;Parent=gene-C9E94_RS11325;Dbxref=GenBank:WP_000073317.1;Name=WP_000073317.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459829.1;locus_tag=C9E94_RS11325;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_000073317.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	89813	90196	.	+	.	ID=gene-C9E94_RS11330;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=C9E94_RS11330;old_locus_tag=C9E94_11570
NZ_PYJR01000084.1	Protein Homology	CDS	89813	90196	.	+	0	ID=cds-WP_135401027.1;Parent=gene-C9E94_RS11330;Dbxref=GenBank:WP_135401027.1;Name=WP_135401027.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459830.1;locus_tag=C9E94_RS11330;product=biofilm formation regulator BssR;protein_id=WP_135401027.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	pseudogene	90299	90584	.	+	.	ID=gene-C9E94_RS23635;Name=C9E94_RS23635;end_range=90584,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23635;old_locus_tag=C9E94_11575;partial=true;pseudo=true
NZ_PYJR01000084.1	Protein Homology	CDS	90299	90584	.	+	0	ID=cds-C9E94_RS23635;Parent=gene-C9E94_RS23635;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=90584,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_046881606.1;locus_tag=C9E94_RS23635;partial=true;product=IS4-like element ISEc60 family transposase;pseudo=true;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	90910	91386	.	+	.	ID=gene-C9E94_RS11335;Name=C9E94_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11335;old_locus_tag=C9E94_11580
NZ_PYJR01000084.1	Protein Homology	CDS	90910	91386	.	+	0	ID=cds-WP_001674655.1;Parent=gene-C9E94_RS11335;Dbxref=GenBank:WP_001674655.1;Name=WP_001674655.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459831.1;locus_tag=C9E94_RS11335;product=aldolase/citrate lyase family protein;protein_id=WP_001674655.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	91409	92158	.	+	.	ID=gene-C9E94_RS11340;Name=C9E94_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11340;old_locus_tag=C9E94_11585
NZ_PYJR01000084.1	Protein Homology	CDS	91409	92158	.	+	0	ID=cds-WP_001521753.1;Parent=gene-C9E94_RS11340;Dbxref=GenBank:WP_001521753.1;Name=WP_001521753.1;Ontology_term=GO:0009055;gbkey=CDS;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002949615.1;locus_tag=C9E94_RS11340;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_001521753.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	92169	93116	.	+	.	ID=gene-C9E94_RS11345;Name=C9E94_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11345;old_locus_tag=C9E94_11590
NZ_PYJR01000084.1	Protein Homology	CDS	92169	93116	.	+	0	ID=cds-WP_135401028.1;Parent=gene-C9E94_RS11345;Dbxref=GenBank:WP_135401028.1;Name=WP_135401028.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459833.1;locus_tag=C9E94_RS11345;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_135401028.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	93149	93412	.	+	.	ID=gene-C9E94_RS23470;Name=C9E94_RS23470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS23470;old_locus_tag=C9E94_11595
NZ_PYJR01000084.1	GeneMarkS-2+	CDS	93149	93412	.	+	0	ID=cds-WP_001528824.1;Parent=gene-C9E94_RS23470;Dbxref=GenBank:WP_001528824.1;Name=WP_001528824.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E94_RS23470;product=hypothetical protein;protein_id=WP_001528824.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	93409	94572	.	+	.	ID=gene-C9E94_RS11355;Name=C9E94_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11355;old_locus_tag=C9E94_11600
NZ_PYJR01000084.1	Protein Homology	CDS	93409	94572	.	+	0	ID=cds-WP_000835385.1;Parent=gene-C9E94_RS11355;Dbxref=GenBank:WP_000835385.1;Name=WP_000835385.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459834.1;locus_tag=C9E94_RS11355;product=acyl-CoA dehydrogenase family protein;protein_id=WP_000835385.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	95021	96706	.	+	.	ID=gene-C9E94_RS11365;Name=C9E94_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11365;old_locus_tag=C9E94_11610
NZ_PYJR01000084.1	Protein Homology	CDS	95021	96706	.	+	0	ID=cds-WP_001000303.1;Parent=gene-C9E94_RS11365;Dbxref=GenBank:WP_001000303.1;Name=WP_001000303.1;Ontology_term=GO:0022900,GO:0004174,GO:0046872,GO:0051539;gbkey=CDS;go_function=electron-transferring-flavoprotein dehydrogenase activity|0004174||IEA,metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459835.1;locus_tag=C9E94_RS11365;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=WP_001000303.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	96712	97602	.	-	.	ID=gene-C9E94_RS11370;Name=C9E94_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11370;old_locus_tag=C9E94_11615
NZ_PYJR01000084.1	Protein Homology	CDS	96712	97602	.	-	0	ID=cds-WP_000545335.1;Parent=gene-C9E94_RS11370;Dbxref=GenBank:WP_000545335.1;Name=WP_000545335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459836.1;locus_tag=C9E94_RS11370;product=LysR family transcriptional regulator;protein_id=WP_000545335.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	97867	98292	.	-	.	ID=gene-C9E94_RS11375;Name=C9E94_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11375;old_locus_tag=C9E94_11620
NZ_PYJR01000084.1	Protein Homology	CDS	97867	98292	.	-	0	ID=cds-WP_000287110.1;Parent=gene-C9E94_RS11375;Dbxref=GenBank:WP_000287110.1;Name=WP_000287110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459837.1;locus_tag=C9E94_RS11375;product=GntP family permease;protein_id=WP_000287110.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	pseudogene	98639	98842	.	+	.	ID=gene-C9E94_RS23890;Name=C9E94_RS23890;end_range=98842,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23890;old_locus_tag=C9E94_11625;partial=true;pseudo=true
NZ_PYJR01000084.1	Protein Homology	CDS	98639	98842	.	+	0	ID=cds-C9E94_RS23890;Parent=gene-C9E94_RS23890;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313;end_range=98842,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611160.1;locus_tag=C9E94_RS23890;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11
NZ_PYJR01000084.1	RefSeq	pseudogene	98828	99330	.	+	.	ID=gene-C9E94_RS23895;Name=C9E94_RS23895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E94_RS23895;partial=true;pseudo=true;start_range=.,98828
NZ_PYJR01000084.1	Protein Homology	CDS	98828	99330	.	+	0	ID=cds-C9E94_RS23895;Parent=gene-C9E94_RS23895;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000554957.1;locus_tag=C9E94_RS23895;partial=true;product=PQQ-dependent sugar dehydrogenase;pseudo=true;start_range=.,98828;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	99327	99953	.	-	.	ID=gene-C9E94_RS11390;Name=C9E94_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11390;old_locus_tag=C9E94_11635
NZ_PYJR01000084.1	Protein Homology	CDS	99327	99953	.	-	0	ID=cds-WP_000631916.1;Parent=gene-C9E94_RS11390;Dbxref=GenBank:WP_000631916.1;Name=WP_000631916.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459839.1;locus_tag=C9E94_RS11390;product=glutathione S-transferase family protein;protein_id=WP_000631916.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	100197	101399	.	+	.	ID=gene-C9E94_RS11395;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=C9E94_RS11395;old_locus_tag=C9E94_11640
NZ_PYJR01000084.1	Protein Homology	CDS	100197	101399	.	+	0	ID=cds-WP_000195712.1;Parent=gene-C9E94_RS11395;Dbxref=GenBank:WP_000195712.1;Name=WP_000195712.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459840.1;locus_tag=C9E94_RS11395;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_000195712.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	101444	102202	.	-	.	ID=gene-C9E94_RS11400;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=C9E94_RS11400;old_locus_tag=C9E94_11645
NZ_PYJR01000084.1	Protein Homology	CDS	101444	102202	.	-	0	ID=cds-WP_000450106.1;Parent=gene-C9E94_RS11400;Dbxref=GenBank:WP_000450106.1;Name=WP_000450106.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459841.1;locus_tag=C9E94_RS11400;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_000450106.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	102274	102882	.	-	.	ID=gene-C9E94_RS11405;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=C9E94_RS11405;old_locus_tag=C9E94_11650
NZ_PYJR01000084.1	Protein Homology	CDS	102274	102882	.	-	0	ID=cds-WP_023181381.1;Parent=gene-C9E94_RS11405;Dbxref=GenBank:WP_023181381.1;Name=WP_023181381.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459842.1;locus_tag=C9E94_RS11405;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_023181381.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	103195	104427	.	+	.	ID=gene-C9E94_RS11410;Name=C9E94_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11410;old_locus_tag=C9E94_11655
NZ_PYJR01000084.1	Protein Homology	CDS	103195	104427	.	+	0	ID=cds-WP_001181284.1;Parent=gene-C9E94_RS11410;Dbxref=GenBank:WP_001181284.1;Name=WP_001181284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459843.1;locus_tag=C9E94_RS11410;product=MFS transporter;protein_id=WP_001181284.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	104481	105296	.	-	.	ID=gene-C9E94_RS11415;Name=C9E94_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11415;old_locus_tag=C9E94_11660
NZ_PYJR01000084.1	Protein Homology	CDS	104481	105296	.	-	0	ID=cds-WP_000023553.1;Parent=gene-C9E94_RS11415;Dbxref=GenBank:WP_000023553.1;Name=WP_000023553.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459844.1;locus_tag=C9E94_RS11415;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000023553.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	105293	106504	.	-	.	ID=gene-C9E94_RS11420;Name=C9E94_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11420;old_locus_tag=C9E94_11665
NZ_PYJR01000084.1	Protein Homology	CDS	105293	106504	.	-	0	ID=cds-WP_135401029.1;Parent=gene-C9E94_RS11420;Dbxref=GenBank:WP_135401029.1;Name=WP_135401029.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459845.1;locus_tag=C9E94_RS11420;product=MFS transporter;protein_id=WP_135401029.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	106672	107292	.	+	.	ID=gene-C9E94_RS11425;Name=C9E94_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11425;old_locus_tag=C9E94_11670
NZ_PYJR01000084.1	Protein Homology	CDS	106672	107292	.	+	0	ID=cds-WP_000661873.1;Parent=gene-C9E94_RS11425;Dbxref=GenBank:WP_000661873.1;Name=WP_000661873.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459846.1;locus_tag=C9E94_RS11425;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000661873.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	107409	109094	.	-	.	ID=gene-C9E94_RS11435;Name=C9E94_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11435;old_locus_tag=C9E94_11680
NZ_PYJR01000084.1	Protein Homology	CDS	107409	109094	.	-	0	ID=cds-WP_001024853.1;Parent=gene-C9E94_RS11435;Dbxref=GenBank:WP_001024853.1;Name=WP_001024853.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=C9E94_RS11435;product=aspartate:alanine antiporter;protein_id=WP_001024853.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	109365	109742	.	+	.	ID=gene-C9E94_RS11440;Name=C9E94_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11440;old_locus_tag=C9E94_11690
NZ_PYJR01000084.1	Protein Homology	CDS	109365	109742	.	+	0	ID=cds-WP_000680850.1;Parent=gene-C9E94_RS11440;Dbxref=GenBank:WP_000680850.1;Name=WP_000680850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459848.1;locus_tag=C9E94_RS11440;product=inner membrane protein YbjM;protein_id=WP_000680850.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	109774	110037	.	-	.	ID=gene-C9E94_RS11445;Name=C9E94_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11445;old_locus_tag=C9E94_11695
NZ_PYJR01000084.1	Protein Homology	CDS	109774	110037	.	-	0	ID=cds-WP_000495513.1;Parent=gene-C9E94_RS11445;Dbxref=GenBank:WP_000495513.1;Name=WP_000495513.1;Ontology_term=GO:0045454,GO:0009055,GO:0015035;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459849.1;locus_tag=C9E94_RS11445;product=GrxA family glutaredoxin;protein_id=WP_000495513.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	110207	110497	.	+	.	ID=gene-C9E94_RS11450;Name=C9E94_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E94_RS11450;old_locus_tag=C9E94_11700
NZ_PYJR01000084.1	Protein Homology	CDS	110207	110497	.	+	0	ID=cds-WP_001259131.1;Parent=gene-C9E94_RS11450;Dbxref=GenBank:WP_001259131.1;Name=WP_001259131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459850.1;locus_tag=C9E94_RS11450;product=YbjC family protein;protein_id=WP_001259131.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	110481	111203	.	+	.	ID=gene-C9E94_RS11455;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=C9E94_RS11455;old_locus_tag=C9E94_11705
NZ_PYJR01000084.1	Protein Homology	CDS	110481	111203	.	+	0	ID=cds-WP_000075300.1;Parent=gene-C9E94_RS11455;Dbxref=GenBank:WP_000075300.1;Name=WP_000075300.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459851.1;locus_tag=C9E94_RS11455;product=nitroreductase NfsA;protein_id=WP_000075300.1;transl_table=11
NZ_PYJR01000084.1	RefSeq	gene	111261	111900	.	+	.	ID=gene-C9E94_RS11460;Name=rimK;end_range=111900,.;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=C9E94_RS11460;old_locus_tag=C9E94_11710;partial=true
NZ_PYJR01000084.1	Protein Homology	CDS	111261	111900	.	+	0	ID=cds-WP_135401030.1;Parent=gene-C9E94_RS11460;Dbxref=GenBank:WP_135401030.1;Name=WP_135401030.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;end_range=111900,.;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459852.1;locus_tag=C9E94_RS11460;partial=true;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_135401030.1;transl_table=11
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