##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM474491v1 #!genome-build-accession NCBI_Assembly:GCF_004744915.1 #!annotation-date 06/11/2025 09:18:23 #!annotation-source NCBI RefSeq GCF_004744915.1-RS_2025_06_11 ##sequence-region NZ_PYJW01000112.1 1 10132 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000112.1 RefSeq region 1 10132 . + . ID=NZ_PYJW01000112.1:1..10132;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000112.1 RefSeq gene 366 1934 . + . ID=gene-C9E95_RS11875;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=C9E95_RS11875;old_locus_tag=C9E95_12180 NZ_PYJW01000112.1 Protein Homology CDS 366 1934 . + 0 ID=cds-WP_000884369.1;Parent=gene-C9E95_RS11875;Dbxref=GenBank:WP_000884369.1;Name=WP_000884369.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459725.1;locus_tag=C9E95_RS11875;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000884369.1;transl_table=11 NZ_PYJW01000112.1 RefSeq gene 1950 3089 . + . ID=gene-C9E95_RS11880;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=C9E95_RS11880;old_locus_tag=C9E95_12185 NZ_PYJW01000112.1 Protein Homology CDS 1950 3089 . + 0 ID=cds-WP_000568258.1;Parent=gene-C9E95_RS11880;Dbxref=GenBank:WP_000568258.1;Name=WP_000568258.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=C9E95_RS11880;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000568258.1;transl_table=11 NZ_PYJW01000112.1 RefSeq gene 3104 3217 . + . ID=gene-C9E95_RS11885;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=C9E95_RS11885;old_locus_tag=C9E95_12190 NZ_PYJW01000112.1 Protein Homology CDS 3104 3217 . + 0 ID=cds-WP_000270278.1;Parent=gene-C9E95_RS11885;Dbxref=GenBank:WP_000270278.1;Name=WP_000270278.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459727.1;locus_tag=C9E95_RS11885;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_000270278.1;transl_table=11 NZ_PYJW01000112.1 RefSeq gene 3354 3635 . + . ID=gene-C9E95_RS11890;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=C9E95_RS11890;old_locus_tag=C9E95_12200 NZ_PYJW01000112.1 Protein Homology CDS 3354 3635 . + 0 ID=cds-WP_000875305.1;Parent=gene-C9E95_RS11890;Dbxref=GenBank:WP_000875305.1;Name=WP_000875305.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459728.1;locus_tag=C9E95_RS11890;product=cyd operon protein YbgE;protein_id=WP_000875305.1;transl_table=11 NZ_PYJW01000112.1 RefSeq gene 3864 4268 . + . ID=gene-C9E95_RS11895;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=C9E95_RS11895;old_locus_tag=C9E95_12205 NZ_PYJW01000112.1 Protein Homology CDS 3864 4268 . + 0 ID=cds-WP_001046240.1;Parent=gene-C9E95_RS11895;Dbxref=GenBank:WP_001046240.1;Name=WP_001046240.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459729.1;locus_tag=C9E95_RS11895;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_001046240.1;transl_table=11 NZ_PYJW01000112.1 RefSeq gene 4265 4957 . + . ID=gene-C9E95_RS11900;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=C9E95_RS11900;old_locus_tag=C9E95_12210 NZ_PYJW01000112.1 Protein Homology CDS 4265 4957 . + 0 ID=cds-WP_000131318.1;Parent=gene-C9E95_RS11900;Dbxref=GenBank:WP_000131318.1;Name=WP_000131318.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459730.1;locus_tag=C9E95_RS11900;product=Tol-Pal system protein TolQ;protein_id=WP_000131318.1;transl_table=11 NZ_PYJW01000112.1 RefSeq gene 4961 5389 . + . ID=gene-C9E95_RS11905;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=C9E95_RS11905;old_locus_tag=C9E95_12215 NZ_PYJW01000112.1 Protein Homology CDS 4961 5389 . + 0 ID=cds-WP_000124676.1;Parent=gene-C9E95_RS11905;Dbxref=GenBank:WP_000124676.1;Name=WP_000124676.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=C9E95_RS11905;product=colicin uptake protein TolR;protein_id=WP_000124676.1;transl_table=11 NZ_PYJW01000112.1 RefSeq gene 5454 6632 . + . ID=gene-C9E95_RS11910;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=C9E95_RS11910;old_locus_tag=C9E95_12220 NZ_PYJW01000112.1 Protein Homology CDS 5454 6632 . + 0 ID=cds-WP_000030587.1;Parent=gene-C9E95_RS11910;Dbxref=GenBank:WP_000030587.1;Name=WP_000030587.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=C9E95_RS11910;product=cell envelope integrity protein TolA;protein_id=WP_000030587.1;transl_table=11 NZ_PYJW01000112.1 RefSeq gene 6756 8048 . + . ID=gene-C9E95_RS11915;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=C9E95_RS11915;old_locus_tag=C9E95_12225 NZ_PYJW01000112.1 Protein Homology CDS 6756 8048 . + 0 ID=cds-WP_001562341.1;Parent=gene-C9E95_RS11915;Dbxref=GenBank:WP_001562341.1;Name=WP_001562341.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=C9E95_RS11915;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_001562341.1;transl_table=11 NZ_PYJW01000112.1 RefSeq gene 8083 8607 . + . ID=gene-C9E95_RS11920;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=C9E95_RS11920;old_locus_tag=C9E95_12230 NZ_PYJW01000112.1 Protein Homology CDS 8083 8607 . + 0 ID=cds-WP_001176621.1;Parent=gene-C9E95_RS11920;Dbxref=GenBank:WP_001176621.1;Name=WP_001176621.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459734.1;locus_tag=C9E95_RS11920;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001176621.1;transl_table=11 NZ_PYJW01000112.1 RefSeq gene 8617 9405 . + . ID=gene-C9E95_RS11925;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=C9E95_RS11925;old_locus_tag=C9E95_12235 NZ_PYJW01000112.1 Protein Homology CDS 8617 9405 . + 0 ID=cds-WP_080204134.1;Parent=gene-C9E95_RS11925;Dbxref=GenBank:WP_080204134.1;Name=WP_080204134.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459735.1;locus_tag=C9E95_RS11925;product=cell division protein CpoB;protein_id=WP_080204134.1;transl_table=11 NZ_PYJW01000112.1 RefSeq gene 9570 9645 . + . ID=gene-C9E95_RS11930;Name=C9E95_RS11930;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS11930;old_locus_tag=C9E95_12240 NZ_PYJW01000112.1 tRNAscan-SE tRNA 9570 9645 . + . ID=rna-C9E95_RS11930;Parent=gene-C9E95_RS11930;anticodon=(pos:9603..9605);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS11930;product=tRNA-Lys NZ_PYJW01000112.1 tRNAscan-SE exon 9570 9645 . + . ID=exon-C9E95_RS11930-1;Parent=rna-C9E95_RS11930;anticodon=(pos:9603..9605);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS11930;product=tRNA-Lys NZ_PYJW01000112.1 RefSeq gene 9782 9857 . + . ID=gene-C9E95_RS11935;Name=C9E95_RS11935;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS11935;old_locus_tag=C9E95_12245 NZ_PYJW01000112.1 tRNAscan-SE tRNA 9782 9857 . + . ID=rna-C9E95_RS11935;Parent=gene-C9E95_RS11935;anticodon=(pos:9815..9817);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS11935;product=tRNA-Val NZ_PYJW01000112.1 tRNAscan-SE exon 9782 9857 . + . ID=exon-C9E95_RS11935-1;Parent=rna-C9E95_RS11935;anticodon=(pos:9815..9817);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS11935;product=tRNA-Val NZ_PYJW01000112.1 RefSeq gene 9861 9936 . + . ID=gene-C9E95_RS11940;Name=C9E95_RS11940;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS11940;old_locus_tag=C9E95_12250 NZ_PYJW01000112.1 tRNAscan-SE tRNA 9861 9936 . + . ID=rna-C9E95_RS11940;Parent=gene-C9E95_RS11940;anticodon=(pos:9894..9896);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS11940;product=tRNA-Lys NZ_PYJW01000112.1 tRNAscan-SE exon 9861 9936 . + . ID=exon-C9E95_RS11940-1;Parent=rna-C9E95_RS11940;anticodon=(pos:9894..9896);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS11940;product=tRNA-Lys ##sequence-region NZ_PYJW01000175.1 1 10074 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000175.1 RefSeq region 1 10074 . + . ID=NZ_PYJW01000175.1:1..10074;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000175.1 RefSeq gene 90 1169 . - . ID=gene-C9E95_RS20685;Name=tcfD;gbkey=Gene;gene=tcfD;gene_biotype=protein_coding;locus_tag=C9E95_RS20685;old_locus_tag=C9E95_21180 NZ_PYJW01000175.1 Protein Homology CDS 90 1169 . - 0 ID=cds-WP_000066479.1;Parent=gene-C9E95_RS20685;Dbxref=GenBank:WP_000066479.1;Name=WP_000066479.1;gbkey=CDS;gene=tcfD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066477.1;locus_tag=C9E95_RS20685;product=fimbrial protein TcfD;protein_id=WP_000066479.1;transl_table=11 NZ_PYJW01000175.1 RefSeq gene 1192 3879 . - . ID=gene-C9E95_RS20690;Name=tcfC;gbkey=Gene;gene=tcfC;gene_biotype=protein_coding;locus_tag=C9E95_RS20690;old_locus_tag=C9E95_21185 NZ_PYJW01000175.1 Protein Homology CDS 1192 3879 . - 0 ID=cds-WP_080204117.1;Parent=gene-C9E95_RS20690;Dbxref=GenBank:WP_080204117.1;Name=WP_080204117.1;gbkey=CDS;gene=tcfC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000092509.1;locus_tag=C9E95_RS20690;product=fimbrial outer membrane usher protein TcfC;protein_id=WP_080204117.1;transl_table=11 NZ_PYJW01000175.1 RefSeq gene 3988 4563 . - . ID=gene-C9E95_RS20695;Name=tcfB;gbkey=Gene;gene=tcfB;gene_biotype=protein_coding;locus_tag=C9E95_RS20695;old_locus_tag=C9E95_21190 NZ_PYJW01000175.1 Protein Homology CDS 3988 4563 . - 0 ID=cds-WP_000287810.1;Parent=gene-C9E95_RS20695;Dbxref=GenBank:WP_000287810.1;Name=WP_000287810.1;gbkey=CDS;gene=tcfB;inference=COORDINATES: protein motif:HMM:NF011837.0;locus_tag=C9E95_RS20695;product=fimbrial protein TcfB;protein_id=WP_000287810.1;transl_table=11 NZ_PYJW01000175.1 RefSeq gene 4614 5324 . - . ID=gene-C9E95_RS20700;Name=tcfA;gbkey=Gene;gene=tcfA;gene_biotype=protein_coding;locus_tag=C9E95_RS20700;old_locus_tag=C9E95_21195 NZ_PYJW01000175.1 Protein Homology CDS 4614 5324 . - 0 ID=cds-WP_001009508.1;Parent=gene-C9E95_RS20700;Dbxref=GenBank:WP_001009508.1;Name=WP_001009508.1;gbkey=CDS;gene=tcfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001009503.1;locus_tag=C9E95_RS20700;product=fimbrial chaperone TcfA;protein_id=WP_001009508.1;transl_table=11 NZ_PYJW01000175.1 RefSeq pseudogene 6360 6917 . + . ID=gene-C9E95_RS20710;Name=C9E95_RS20710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS20710;old_locus_tag=C9E95_21205;pseudo=true NZ_PYJW01000175.1 Protein Homology CDS 6360 6917 . + 0 ID=cds-C9E95_RS20710;Parent=gene-C9E95_RS20710;Note=internal stop;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF013828.6;locus_tag=C9E95_RS20710;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_PYJW01000175.1 RefSeq pseudogene 6982 7143 . - . ID=gene-C9E95_RS20715;Name=C9E95_RS20715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS20715;old_locus_tag=C9E95_21210;partial=true;pseudo=true;start_range=.,6982 NZ_PYJW01000175.1 Protein Homology CDS 6982 7143 . - 0 ID=cds-C9E95_RS20715;Parent=gene-C9E95_RS20715;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611456.1;locus_tag=C9E95_RS20715;partial=true;product=transposase;pseudo=true;start_range=.,6982;transl_table=11 NZ_PYJW01000175.1 RefSeq pseudogene 7224 7343 . - . ID=gene-C9E95_RS20720;Name=C9E95_RS20720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS20720;old_locus_tag=C9E95_21215;partial=true;pseudo=true;start_range=.,7224 NZ_PYJW01000175.1 Protein Homology CDS 7224 7343 . - 0 ID=cds-C9E95_RS20720;Parent=gene-C9E95_RS20720;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459303.1;locus_tag=C9E95_RS20720;partial=true;product=hypothetical protein;pseudo=true;start_range=.,7224;transl_table=11 NZ_PYJW01000175.1 RefSeq gene 7463 8410 . - . ID=gene-C9E95_RS20725;Name=C9E95_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20725;old_locus_tag=C9E95_21220 NZ_PYJW01000175.1 Protein Homology CDS 7463 8410 . - 0 ID=cds-WP_023993811.1;Parent=gene-C9E95_RS20725;Dbxref=GenBank:WP_023993811.1;Name=WP_023993811.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459302.1;locus_tag=C9E95_RS20725;product=LysR family transcriptional regulator;protein_id=WP_023993811.1;transl_table=11 NZ_PYJW01000175.1 RefSeq pseudogene 8907 9144 . - . ID=gene-C9E95_RS20730;Name=C9E95_RS20730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS20730;old_locus_tag=C9E95_21225;partial=true;pseudo=true;start_range=.,8907 NZ_PYJW01000175.1 Protein Homology CDS 8907 9144 . - 0 ID=cds-C9E95_RS20730;Parent=gene-C9E95_RS20730;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602066.1;locus_tag=C9E95_RS20730;partial=true;product=PerC family transcriptional regulator;pseudo=true;start_range=.,8907;transl_table=11 NZ_PYJW01000175.1 RefSeq gene 9227 10048 . - . ID=gene-C9E95_RS20735;Name=C9E95_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20735;old_locus_tag=C9E95_21230 NZ_PYJW01000175.1 Protein Homology CDS 9227 10048 . - 0 ID=cds-WP_023994368.1;Parent=gene-C9E95_RS20735;Dbxref=GenBank:WP_023994368.1;Name=WP_023994368.1;Ontology_term=GO:0005975,GO:0016787,GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459301.1;locus_tag=C9E95_RS20735;product=polysaccharide deacetylase family protein;protein_id=WP_023994368.1;transl_table=11 ##sequence-region NZ_PYJW01000162.1 1 9725 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000162.1 RefSeq region 1 9725 . + . ID=NZ_PYJW01000162.1:1..9725;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000162.1 RefSeq gene 85 1908 . + . ID=gene-C9E95_RS18690;Name=C9E95_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18690;old_locus_tag=C9E95_19150 NZ_PYJW01000162.1 Protein Homology CDS 85 1908 . + 0 ID=cds-WP_000669902.1;Parent=gene-C9E95_RS18690;Dbxref=GenBank:WP_000669902.1;Name=WP_000669902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669888.1;locus_tag=C9E95_RS18690;product=aryl-sulfate sulfotransferase;protein_id=WP_000669902.1;transl_table=11 NZ_PYJW01000162.1 RefSeq gene 2105 3268 . - . ID=gene-C9E95_RS18695;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=C9E95_RS18695;old_locus_tag=C9E95_19155 NZ_PYJW01000162.1 Protein Homology CDS 2105 3268 . - 0 ID=cds-WP_000438778.1;Parent=gene-C9E95_RS18695;Dbxref=GenBank:WP_000438778.1;Name=WP_000438778.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadA;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462867.1;locus_tag=C9E95_RS18695;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_000438778.1;transl_table=11 NZ_PYJW01000162.1 RefSeq gene 3278 5467 . - . ID=gene-C9E95_RS18700;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=C9E95_RS18700;old_locus_tag=C9E95_19160 NZ_PYJW01000162.1 Protein Homology CDS 3278 5467 . - 0 ID=cds-WP_023221264.1;Parent=gene-C9E95_RS18700;Dbxref=GenBank:WP_023221264.1;Name=WP_023221264.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692,GO:0036125;gbkey=CDS;gene=fadB;go_component=fatty acid beta-oxidation multienzyme complex|0036125||IEA;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462868.1;locus_tag=C9E95_RS18700;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_023221264.1;transl_table=11 NZ_PYJW01000162.1 RefSeq gene 5657 6988 . + . ID=gene-C9E95_RS18705;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=C9E95_RS18705;old_locus_tag=C9E95_19165 NZ_PYJW01000162.1 Protein Homology CDS 5657 6988 . + 0 ID=cds-WP_000444529.1;Parent=gene-C9E95_RS18705;Dbxref=GenBank:WP_000444529.1;Name=WP_000444529.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=C9E95_RS18705;product=Xaa-Pro dipeptidase;protein_id=WP_000444529.1;transl_table=11 NZ_PYJW01000162.1 RefSeq gene 6988 7602 . + . ID=gene-C9E95_RS18710;Name=C9E95_RS18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18710;old_locus_tag=C9E95_19170 NZ_PYJW01000162.1 Protein Homology CDS 6988 7602 . + 0 ID=cds-WP_080204086.1;Parent=gene-C9E95_RS18710;Dbxref=GenBank:WP_080204086.1;Name=WP_080204086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462870.1;locus_tag=C9E95_RS18710;product=IMPACT family protein;protein_id=WP_080204086.1;transl_table=11 NZ_PYJW01000162.1 RefSeq gene 7641 9092 . + . ID=gene-C9E95_RS18715;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=C9E95_RS18715;old_locus_tag=C9E95_19175 NZ_PYJW01000162.1 Protein Homology CDS 7641 9092 . + 0 ID=cds-WP_000545688.1;Parent=gene-C9E95_RS18715;Dbxref=GenBank:WP_000545688.1;Name=WP_000545688.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=C9E95_RS18715;product=Trk system potassium transporter TrkH;protein_id=WP_000545688.1;transl_table=11 NZ_PYJW01000162.1 RefSeq gene 9104 9649 . + . ID=gene-C9E95_RS18720;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=C9E95_RS18720;old_locus_tag=C9E95_19180 NZ_PYJW01000162.1 Protein Homology CDS 9104 9649 . + 0 ID=cds-WP_000853982.1;Parent=gene-C9E95_RS18720;Dbxref=GenBank:WP_000853982.1;Name=WP_000853982.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462872.1;locus_tag=C9E95_RS18720;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_000853982.1;transl_table=11 ##sequence-region NZ_PYJW01000156.1 1 9461 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000156.1 RefSeq region 1 9461 . + . ID=NZ_PYJW01000156.1:1..9461;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000156.1 RefSeq gene 214 489 . + . ID=gene-C9E95_RS23555;Name=C9E95_RS23555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23555 NZ_PYJW01000156.1 GeneMarkS-2+ CDS 214 489 . + 0 ID=cds-WP_001534402.1;Parent=gene-C9E95_RS23555;Dbxref=GenBank:WP_001534402.1;Name=WP_001534402.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS23555;product=hypothetical protein;protein_id=WP_001534402.1;transl_table=11 NZ_PYJW01000156.1 RefSeq gene 616 1437 . - . ID=gene-C9E95_RS18265;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=C9E95_RS18265;old_locus_tag=C9E95_18720 NZ_PYJW01000156.1 Protein Homology CDS 616 1437 . - 0 ID=cds-WP_000544037.1;Parent=gene-C9E95_RS18265;Dbxref=GenBank:WP_000544037.1;Name=WP_000544037.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459069.1;locus_tag=C9E95_RS18265;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_000544037.1;transl_table=11 NZ_PYJW01000156.1 RefSeq gene 1617 2525 . - . ID=gene-C9E95_RS18270;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=C9E95_RS18270;old_locus_tag=C9E95_18725 NZ_PYJW01000156.1 Protein Homology CDS 1617 2525 . - 0 ID=cds-WP_001103238.1;Parent=gene-C9E95_RS18270;Dbxref=GenBank:WP_001103238.1;Name=WP_001103238.1;Ontology_term=GO:0016310,GO:0019361,GO:0005524,GO:0046917;gbkey=CDS;gene=citG;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA,2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|0019361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459068.1;locus_tag=C9E95_RS18270;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_001103238.1;transl_table=11 NZ_PYJW01000156.1 RefSeq gene 2503 3054 . - . ID=gene-C9E95_RS18275;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=C9E95_RS18275;old_locus_tag=C9E95_18730 NZ_PYJW01000156.1 Protein Homology CDS 2503 3054 . - 0 ID=cds-WP_000679050.1;Parent=gene-C9E95_RS18275;Dbxref=GenBank:WP_000679050.1;Name=WP_000679050.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459067.1;locus_tag=C9E95_RS18275;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_000679050.1;transl_table=11 NZ_PYJW01000156.1 RefSeq gene 3054 4574 . - . ID=gene-C9E95_RS18280;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=C9E95_RS18280;old_locus_tag=C9E95_18735 NZ_PYJW01000156.1 Protein Homology CDS 3054 4574 . - 0 ID=cds-WP_000665573.1;Parent=gene-C9E95_RS18280;Dbxref=GenBank:WP_000665573.1;Name=WP_000665573.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459066.1;locus_tag=C9E95_RS18280;product=citrate lyase subunit alpha;protein_id=WP_000665573.1;transl_table=11 NZ_PYJW01000156.1 RefSeq gene 4585 5454 . - . ID=gene-C9E95_RS18285;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=C9E95_RS18285;old_locus_tag=C9E95_18740 NZ_PYJW01000156.1 Protein Homology CDS 4585 5454 . - 0 ID=cds-WP_023993194.1;Parent=gene-C9E95_RS18285;Dbxref=GenBank:WP_023993194.1;Name=WP_023993194.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459065.1;locus_tag=C9E95_RS18285;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_023993194.1;transl_table=11 NZ_PYJW01000156.1 RefSeq gene 5451 5744 . - . ID=gene-C9E95_RS18290;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=C9E95_RS18290;old_locus_tag=C9E95_18745 NZ_PYJW01000156.1 Protein Homology CDS 5451 5744 . - 0 ID=cds-WP_000691461.1;Parent=gene-C9E95_RS18290;Dbxref=GenBank:WP_000691461.1;Name=WP_000691461.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459064.1;locus_tag=C9E95_RS18290;product=citrate lyase acyl carrier protein;protein_id=WP_000691461.1;transl_table=11 NZ_PYJW01000156.1 RefSeq gene 5774 6817 . - . ID=gene-C9E95_RS18295;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=C9E95_RS18295;old_locus_tag=C9E95_18750 NZ_PYJW01000156.1 Protein Homology CDS 5774 6817 . - 0 ID=cds-WP_001181444.1;Parent=gene-C9E95_RS18295;Dbxref=GenBank:WP_001181444.1;Name=WP_001181444.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459063.1;locus_tag=C9E95_RS18295;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_001181444.1;transl_table=11 NZ_PYJW01000156.1 RefSeq gene 7062 8402 . + . ID=gene-C9E95_RS18300;Name=citS;gbkey=Gene;gene=citS;gene_biotype=protein_coding;locus_tag=C9E95_RS18300;old_locus_tag=C9E95_18755 NZ_PYJW01000156.1 Protein Homology CDS 7062 8402 . + 0 ID=cds-WP_000183596.1;Parent=gene-C9E95_RS18300;Dbxref=GenBank:WP_000183596.1;Name=WP_000183596.1;Ontology_term=GO:0006101,GO:0006814,GO:0008514,GO:0015293;gbkey=CDS;gene=citS;go_function=organic anion transmembrane transporter activity|0008514||IEA,symporter activity|0015293||IEA;go_process=citrate metabolic process|0006101||IEA,sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459062.1;locus_tag=C9E95_RS18300;product=citrate/sodium symporter CitS;protein_id=WP_000183596.1;transl_table=11 NZ_PYJW01000156.1 RefSeq gene 8561 8803 . + . ID=gene-C9E95_RS18305;Name=C9E95_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18305;old_locus_tag=C9E95_18760 NZ_PYJW01000156.1 Protein Homology CDS 8561 8803 . + 0 ID=cds-WP_001538909.1;Parent=gene-C9E95_RS18305;Dbxref=GenBank:WP_001538909.1;Name=WP_001538909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459746.1;locus_tag=C9E95_RS18305;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_001538909.1;transl_table=11 NZ_PYJW01000156.1 RefSeq pseudogene 8819 9461 . + . ID=gene-C9E95_RS18310;Name=C9E95_RS18310;end_range=9461,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS18310;old_locus_tag=C9E95_18765;partial=true;pseudo=true NZ_PYJW01000156.1 Protein Homology CDS 8819 9461 . + 0 ID=cds-C9E95_RS18310;Parent=gene-C9E95_RS18310;Note=catalyzes the formation of pyruvate from oxaloacetate%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=9461,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9E95_RS18310;partial=true;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;pseudo=true;transl_table=11 ##sequence-region NZ_PYJW01000171.1 1 8886 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000171.1 RefSeq region 1 8886 . + . ID=NZ_PYJW01000171.1:1..8886;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000171.1 RefSeq gene 204 2141 . + . ID=gene-C9E95_RS20335;Name=C9E95_RS20335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20335;old_locus_tag=C9E95_20830 NZ_PYJW01000171.1 Protein Homology CDS 204 2141 . + 0 ID=cds-WP_014343940.1;Parent=gene-C9E95_RS20335;Dbxref=GenBank:WP_014343940.1;Name=WP_014343940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453701.1;locus_tag=C9E95_RS20335;product=bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2-deoxyphosphogluconate aldolase;protein_id=WP_014343940.1;transl_table=11 NZ_PYJW01000171.1 RefSeq gene 2202 3368 . + . ID=gene-C9E95_RS20340;Name=C9E95_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20340;old_locus_tag=C9E95_20835 NZ_PYJW01000171.1 Protein Homology CDS 2202 3368 . + 0 ID=cds-WP_023993581.1;Parent=gene-C9E95_RS20340;Dbxref=GenBank:WP_023993581.1;Name=WP_023993581.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463289.1;locus_tag=C9E95_RS20340;product=MFS transporter;protein_id=WP_023993581.1;transl_table=11 NZ_PYJW01000171.1 RefSeq gene 3373 4206 . - . ID=gene-C9E95_RS20345;Name=iolI1;gbkey=Gene;gene=iolI1;gene_biotype=protein_coding;locus_tag=C9E95_RS20345;old_locus_tag=C9E95_20840 NZ_PYJW01000171.1 Protein Homology CDS 3373 4206 . - 0 ID=cds-WP_000976927.1;Parent=gene-C9E95_RS20345;Dbxref=GenBank:WP_000976927.1;Name=WP_000976927.1;gbkey=CDS;gene=iolI1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463288.1;locus_tag=C9E95_RS20345;product=2-keto-myo-inositol isomerase IolI1;protein_id=WP_000976927.1;transl_table=11 NZ_PYJW01000171.1 RefSeq gene 4207 5550 . - . ID=gene-C9E95_RS20350;Name=srfJ;gbkey=Gene;gene=srfJ;gene_biotype=protein_coding;locus_tag=C9E95_RS20350;old_locus_tag=C9E95_20845 NZ_PYJW01000171.1 Protein Homology CDS 4207 5550 . - 0 ID=cds-WP_023250006.1;Parent=gene-C9E95_RS20350;Dbxref=GenBank:WP_023250006.1;Name=WP_023250006.1;gbkey=CDS;gene=srfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463287.1;locus_tag=C9E95_RS20350;product=lysosomal glucosyl ceramidase-like type III secretion effector SrfJ;protein_id=WP_023250006.1;transl_table=11 NZ_PYJW01000171.1 RefSeq gene 5648 6658 . - . ID=gene-C9E95_RS20355;Name=iolG1;gbkey=Gene;gene=iolG1;gene_biotype=protein_coding;locus_tag=C9E95_RS20355;old_locus_tag=C9E95_20850 NZ_PYJW01000171.1 Protein Homology CDS 5648 6658 . - 0 ID=cds-WP_000172704.1;Parent=gene-C9E95_RS20355;Dbxref=GenBank:WP_000172704.1;Name=WP_000172704.1;gbkey=CDS;gene=iolG1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463286.1;locus_tag=C9E95_RS20355;product=inositol 2-dehydrogenase IolG1;protein_id=WP_000172704.1;transl_table=11 NZ_PYJW01000171.1 RefSeq gene 6677 7597 . - . ID=gene-C9E95_RS20360;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=C9E95_RS20360;old_locus_tag=C9E95_20855 NZ_PYJW01000171.1 Protein Homology CDS 6677 7597 . - 0 ID=cds-WP_012601329.1;Parent=gene-C9E95_RS20360;Dbxref=GenBank:WP_012601329.1;Name=WP_012601329.1;Ontology_term=GO:0019310,GO:0050114;gbkey=CDS;gene=iolE;go_function=myo-inosose-2 dehydratase activity|0050114||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463285.3;locus_tag=C9E95_RS20360;product=myo-inosose-2 dehydratase;protein_id=WP_012601329.1;transl_table=11 NZ_PYJW01000171.1 RefSeq gene 7856 8680 . - . ID=gene-C9E95_RS20365;Name=reiD;gbkey=Gene;gene=reiD;gene_biotype=protein_coding;locus_tag=C9E95_RS20365;old_locus_tag=C9E95_20860 NZ_PYJW01000171.1 Protein Homology CDS 7856 8680 . - 0 ID=cds-WP_000332219.1;Parent=gene-C9E95_RS20365;Dbxref=GenBank:WP_000332219.1;Name=WP_000332219.1;gbkey=CDS;gene=reiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000332219.1;locus_tag=C9E95_RS20365;product=myo-inositol utilization transcriptional regulator ReiD;protein_id=WP_000332219.1;transl_table=11 NZ_PYJW01000171.1 RefSeq pseudogene 8803 8886 . + . ID=gene-C9E95_RS23570;Name=C9E95_RS23570;end_range=8886,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23570;partial=true;pseudo=true NZ_PYJW01000171.1 Protein Homology CDS 8803 8886 . + 0 ID=cds-C9E95_RS23570;Parent=gene-C9E95_RS23570;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=8886,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453693.1;locus_tag=C9E95_RS23570;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_PYJW01000096.1 1 8770 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000096.1 RefSeq region 1 8770 . + . ID=NZ_PYJW01000096.1:1..8770;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000096.1 RefSeq pseudogene 1 422 . + . ID=gene-C9E95_RS10435;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=pseudogene;gene_synonym=manB;locus_tag=C9E95_RS10435;old_locus_tag=C9E95_10685;partial=true;pseudo=true;start_range=.,1 NZ_PYJW01000096.1 Protein Homology CDS 1 422 . + 2 ID=cds-C9E95_RS10435;Parent=gene-C9E95_RS10435;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=C9E95_RS10435;partial=true;product=colanic acid biosynthesis phosphomannomutase CpsG;pseudo=true;start_range=.,1;transl_table=11 NZ_PYJW01000096.1 RefSeq gene 476 1870 . + . ID=gene-C9E95_RS10440;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=C9E95_RS10440;old_locus_tag=C9E95_10690 NZ_PYJW01000096.1 Protein Homology CDS 476 1870 . + 0 ID=cds-WP_000183155.1;Parent=gene-C9E95_RS10440;Dbxref=GenBank:WP_000183155.1;Name=WP_000183155.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461048.1;locus_tag=C9E95_RS10440;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_000183155.1;transl_table=11 NZ_PYJW01000096.1 RefSeq gene 1972 3450 . + . ID=gene-C9E95_RS10445;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=C9E95_RS10445;old_locus_tag=C9E95_10695 NZ_PYJW01000096.1 Protein Homology CDS 1972 3450 . + 0 ID=cds-WP_023993372.1;Parent=gene-C9E95_RS10445;Dbxref=GenBank:WP_023993372.1;Name=WP_023993372.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461047.1;locus_tag=C9E95_RS10445;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=WP_023993372.1;transl_table=11 NZ_PYJW01000096.1 RefSeq gene 3472 4752 . + . ID=gene-C9E95_RS10450;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=C9E95_RS10450;old_locus_tag=C9E95_10700 NZ_PYJW01000096.1 Protein Homology CDS 3472 4752 . + 0 ID=cds-WP_000770895.1;Parent=gene-C9E95_RS10450;Dbxref=GenBank:WP_000770895.1;Name=WP_000770895.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=C9E95_RS10450;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_000770895.1;transl_table=11 NZ_PYJW01000096.1 RefSeq gene 4749 5969 . + . ID=gene-C9E95_RS10455;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=C9E95_RS10455;old_locus_tag=C9E95_10705 NZ_PYJW01000096.1 Protein Homology CDS 4749 5969 . + 0 ID=cds-WP_023993371.1;Parent=gene-C9E95_RS10455;Dbxref=GenBank:WP_023993371.1;Name=WP_023993371.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461045.1;locus_tag=C9E95_RS10455;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WP_023993371.1;transl_table=11 NZ_PYJW01000096.1 RefSeq gene 5980 7383 . + . ID=gene-C9E95_RS10460;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=C9E95_RS10460;old_locus_tag=C9E95_10710 NZ_PYJW01000096.1 Protein Homology CDS 5980 7383 . + 0 ID=cds-WP_023994317.1;Parent=gene-C9E95_RS10460;Dbxref=GenBank:WP_023994317.1;Name=WP_023994317.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461044.1;locus_tag=C9E95_RS10460;product=colanic acid biosynthesis protein WcaM;protein_id=WP_023994317.1;transl_table=11 NZ_PYJW01000096.1 RefSeq gene 7561 8454 . + . ID=gene-C9E95_RS10465;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=C9E95_RS10465;old_locus_tag=C9E95_10715 NZ_PYJW01000096.1 Protein Homology CDS 7561 8454 . + 0 ID=cds-WP_000981469.1;Parent=gene-C9E95_RS10465;Dbxref=GenBank:WP_000981469.1;Name=WP_000981469.1;Ontology_term=GO:0006011,GO:0030234;gbkey=CDS;gene=galF;go_function=enzyme regulator activity|0030234||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461043.1;locus_tag=C9E95_RS10465;product=GalU regulator GalF;protein_id=WP_000981469.1;transl_table=11 ##sequence-region NZ_PYJW01000051.1 1 8643 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000051.1 RefSeq region 1 8643 . + . ID=NZ_PYJW01000051.1:1..8643;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000051.1 RefSeq gene 74 433 . - . ID=gene-C9E95_RS04105;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=C9E95_RS04105;old_locus_tag=C9E95_04210 NZ_PYJW01000051.1 Protein Homology CDS 74 433 . - 0 ID=cds-WP_000355776.1;Parent=gene-C9E95_RS04105;Dbxref=GenBank:WP_000355776.1;Name=WP_000355776.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681574.1;locus_tag=C9E95_RS04105;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_000355776.1;transl_table=11 NZ_PYJW01000051.1 RefSeq gene 540 1151 . + . ID=gene-C9E95_RS04110;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=C9E95_RS04110;old_locus_tag=C9E95_04215 NZ_PYJW01000051.1 Protein Homology CDS 540 1151 . + 0 ID=cds-WP_001272784.1;Parent=gene-C9E95_RS04110;Dbxref=GenBank:WP_001272784.1;Name=WP_001272784.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462122.1;locus_tag=C9E95_RS04110;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_001272784.1;transl_table=11 NZ_PYJW01000051.1 RefSeq pseudogene 1135 1278 . + . ID=gene-C9E95_RS23150;Name=C9E95_RS23150;end_range=1278,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23150;partial=true;pseudo=true;start_range=.,1135 NZ_PYJW01000051.1 Protein Homology CDS 1135 1278 . + 0 ID=cds-C9E95_RS23150;Parent=gene-C9E95_RS23150;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016829;end_range=1278,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311971.1;locus_tag=C9E95_RS23150;partial=true;product=fumarate hydratase;pseudo=true;start_range=.,1135;transl_table=11 NZ_PYJW01000051.1 RefSeq gene 1401 2414 . - . ID=gene-C9E95_RS04120;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=C9E95_RS04120;old_locus_tag=C9E95_04225 NZ_PYJW01000051.1 Protein Homology CDS 1401 2414 . - 0 ID=cds-WP_001264391.1;Parent=gene-C9E95_RS04120;Dbxref=GenBank:WP_001264391.1;Name=WP_001264391.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=C9E95_RS04120;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_001264391.1;transl_table=11 NZ_PYJW01000051.1 RefSeq gene 2642 2857 . + . ID=gene-C9E95_RS04125;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=C9E95_RS04125;old_locus_tag=C9E95_04235 NZ_PYJW01000051.1 Protein Homology CDS 2642 2857 . + 0 ID=cds-WP_001144069.1;Parent=gene-C9E95_RS04125;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=C9E95_RS04125;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_PYJW01000051.1 RefSeq gene 3093 4838 . + . ID=gene-C9E95_RS04130;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=C9E95_RS04130;old_locus_tag=C9E95_04240 NZ_PYJW01000051.1 Protein Homology CDS 3093 4838 . + 0 ID=cds-WP_000918865.1;Parent=gene-C9E95_RS04130;Dbxref=GenBank:WP_000918865.1;Name=WP_000918865.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462125.1;locus_tag=C9E95_RS04130;product=DNA primase;protein_id=WP_000918865.1;transl_table=11 NZ_PYJW01000051.1 RefSeq gene 4853 6835 . + . ID=gene-C9E95_RS04135;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=C9E95_RS04135;old_locus_tag=C9E95_04245 NZ_PYJW01000051.1 Protein Homology CDS 4853 6835 . + 0 ID=cds-WP_001120159.1;Parent=gene-C9E95_RS04135;Dbxref=GenBank:WP_001120159.1;Name=WP_001120159.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF004208.0;locus_tag=C9E95_RS04135;product=RNA polymerase sigma factor RpoD;protein_id=WP_001120159.1;transl_table=11 NZ_PYJW01000051.1 RefSeq gene 6959 7465 . - . ID=gene-C9E95_RS04140;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=C9E95_RS04140;old_locus_tag=C9E95_04250 NZ_PYJW01000051.1 Protein Homology CDS 6959 7465 . - 0 ID=cds-WP_000237776.1;Parent=gene-C9E95_RS04140;Dbxref=GenBank:WP_000237776.1;Name=WP_000237776.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462127.1;locus_tag=C9E95_RS04140;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_000237776.1;transl_table=11 NZ_PYJW01000051.1 RefSeq gene 7591 7666 . + . ID=gene-C9E95_RS04145;Name=C9E95_RS04145;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS04145;old_locus_tag=C9E95_04255 NZ_PYJW01000051.1 tRNAscan-SE tRNA 7591 7666 . + . ID=rna-C9E95_RS04145;Parent=gene-C9E95_RS04145;anticodon=(pos:7624..7626);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS04145;product=tRNA-Ile NZ_PYJW01000051.1 tRNAscan-SE exon 7591 7666 . + . ID=exon-C9E95_RS04145-1;Parent=rna-C9E95_RS04145;anticodon=(pos:7624..7626);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS04145;product=tRNA-Ile NZ_PYJW01000051.1 RefSeq gene 7746 8513 . - . ID=gene-C9E95_RS04150;Name=C9E95_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04150;old_locus_tag=C9E95_04260 NZ_PYJW01000051.1 Protein Homology CDS 7746 8513 . - 0 ID=cds-WP_000213680.1;Parent=gene-C9E95_RS04150;Dbxref=GenBank:WP_000213680.1;Name=WP_000213680.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462128.1;locus_tag=C9E95_RS04150;product=siderophore-interacting protein;protein_id=WP_000213680.1;transl_table=11 ##sequence-region NZ_PYJW01000107.1 1 8343 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000107.1 RefSeq region 1 8343 . + . ID=NZ_PYJW01000107.1:1..8343;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000107.1 RefSeq gene 286 561 . + . ID=gene-C9E95_RS23290;Name=C9E95_RS23290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23290;old_locus_tag=C9E95_11675 NZ_PYJW01000107.1 GeneMarkS-2+ CDS 286 561 . + 0 ID=cds-WP_225737025.1;Parent=gene-C9E95_RS23290;Dbxref=GenBank:WP_225737025.1;Name=WP_225737025.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS23290;product=hypothetical protein;protein_id=WP_225737025.1;transl_table=11 NZ_PYJW01000107.1 RefSeq gene 654 1121 . + . ID=gene-C9E95_RS11385;Name=C9E95_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11385;old_locus_tag=C9E95_11680 NZ_PYJW01000107.1 Protein Homology CDS 654 1121 . + 0 ID=cds-WP_080204120.1;Parent=gene-C9E95_RS11385;Dbxref=GenBank:WP_080204120.1;Name=WP_080204120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828176.1;locus_tag=C9E95_RS11385;product=sugar tyrosine-protein kinase;protein_id=WP_080204120.1;transl_table=11 NZ_PYJW01000107.1 RefSeq pseudogene 1151 1305 . + . ID=gene-C9E95_RS23745;Name=C9E95_RS23745;end_range=1305,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23745;old_locus_tag=C9E95_11685;partial=true;pseudo=true;start_range=.,1151 NZ_PYJW01000107.1 Protein Homology CDS 1151 1305 . + 0 ID=cds-C9E95_RS23745;Parent=gene-C9E95_RS23745;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1305,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000015242.1;locus_tag=C9E95_RS23745;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,1151;transl_table=11 NZ_PYJW01000107.1 RefSeq gene 1430 1708 . + . ID=gene-C9E95_RS11395;Name=C9E95_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11395;old_locus_tag=C9E95_11690 NZ_PYJW01000107.1 Protein Homology CDS 1430 1708 . + 0 ID=cds-WP_012543321.1;Parent=gene-C9E95_RS11395;Dbxref=GenBank:WP_012543321.1;Name=WP_012543321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459293.1;locus_tag=C9E95_RS11395;product=hypothetical protein;protein_id=WP_012543321.1;transl_table=11 NZ_PYJW01000107.1 RefSeq pseudogene 1775 2089 . - . ID=gene-C9E95_RS11400;Name=C9E95_RS11400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS11400;old_locus_tag=C9E95_11695;pseudo=true NZ_PYJW01000107.1 Protein Homology CDS 1775 2089 . - 0 ID=cds-C9E95_RS11400;Parent=gene-C9E95_RS11400;Note=internal stop;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632802.1;locus_tag=C9E95_RS11400;product=SymE family type I addiction module toxin;pseudo=true;transl_table=11 NZ_PYJW01000107.1 RefSeq gene 2181 2339 . + . ID=gene-C9E95_RS23750;Name=C9E95_RS23750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23750 NZ_PYJW01000107.1 Protein Homology CDS 2181 2339 . + 0 ID=cds-WP_217805114.1;Parent=gene-C9E95_RS23750;Dbxref=GenBank:WP_217805114.1;Name=WP_217805114.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.6;locus_tag=C9E95_RS23750;product=transposase;protein_id=WP_217805114.1;transl_table=11 NZ_PYJW01000107.1 RefSeq pseudogene 2273 2843 . + . ID=gene-C9E95_RS11405;Name=C9E95_RS11405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS11405;old_locus_tag=C9E95_11700;partial=true;pseudo=true;start_range=.,2273 NZ_PYJW01000107.1 Protein Homology CDS 2273 2843 . + 0 ID=cds-C9E95_RS11405;Parent=gene-C9E95_RS11405;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611501.1;locus_tag=C9E95_RS11405;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,2273;transl_table=11 NZ_PYJW01000107.1 RefSeq gene 3608 4105 . + . ID=gene-C9E95_RS11410;Name=C9E95_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11410;old_locus_tag=C9E95_11705 NZ_PYJW01000107.1 Protein Homology CDS 3608 4105 . + 0 ID=cds-WP_080204118.1;Parent=gene-C9E95_RS11410;Dbxref=GenBank:WP_080204118.1;Name=WP_080204118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789648.1;locus_tag=C9E95_RS11410;product=Saf-pilin pilus formation protein SafA;protein_id=WP_080204118.1;transl_table=11 NZ_PYJW01000107.1 RefSeq gene 4180 4920 . + . ID=gene-C9E95_RS11415;Name=safB;gbkey=Gene;gene=safB;gene_biotype=protein_coding;locus_tag=C9E95_RS11415;old_locus_tag=C9E95_11710 NZ_PYJW01000107.1 Protein Homology CDS 4180 4920 . + 0 ID=cds-WP_023204745.1;Parent=gene-C9E95_RS11415;Dbxref=GenBank:WP_023204745.1;Name=WP_023204745.1;gbkey=CDS;gene=safB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465813.1;locus_tag=C9E95_RS11415;product=pili assembly chaperone SafB;protein_id=WP_023204745.1;transl_table=11 NZ_PYJW01000107.1 RefSeq gene 4944 7454 . + . ID=gene-C9E95_RS11420;Name=C9E95_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11420;old_locus_tag=C9E95_11715 NZ_PYJW01000107.1 Protein Homology CDS 4944 7454 . + 0 ID=cds-WP_023993991.1;Parent=gene-C9E95_RS11420;Dbxref=GenBank:WP_023993991.1;Name=WP_023993991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459299.1;locus_tag=C9E95_RS11420;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_023993991.1;transl_table=11 NZ_PYJW01000107.1 RefSeq gene 7476 7946 . + . ID=gene-C9E95_RS11425;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=C9E95_RS11425;old_locus_tag=C9E95_11720 NZ_PYJW01000107.1 Protein Homology CDS 7476 7946 . + 0 ID=cds-WP_000266939.1;Parent=gene-C9E95_RS11425;Dbxref=GenBank:WP_000266939.1;Name=WP_000266939.1;gbkey=CDS;gene=afaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459300.1;locus_tag=C9E95_RS11425;product=AfaD family invasin;protein_id=WP_000266939.1;transl_table=11 ##sequence-region NZ_PYJW01000141.1 1 7648 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000141.1 RefSeq region 1 7648 . + . ID=NZ_PYJW01000141.1:1..7648;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000141.1 RefSeq gene 1 297 . + . ID=gene-C9E95_RS23310;Name=C9E95_RS23310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23310;old_locus_tag=C9E95_16730;partial=true;start_range=.,1 NZ_PYJW01000141.1 Protein Homology CDS 1 297 . + 0 ID=cds-WP_135369867.1;Parent=gene-C9E95_RS23310;Dbxref=GenBank:WP_135369867.1;Name=WP_135369867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000616626.1;locus_tag=C9E95_RS23310;partial=true;product=hypothetical protein;protein_id=WP_135369867.1;start_range=.,1;transl_table=11 NZ_PYJW01000141.1 RefSeq pseudogene 497 623 . + . ID=gene-C9E95_RS23805;Name=C9E95_RS23805;end_range=623,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23805;partial=true;pseudo=true;start_range=.,497 NZ_PYJW01000141.1 Protein Homology CDS 497 623 . + 0 ID=cds-C9E95_RS23805;Parent=gene-C9E95_RS23805;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=623,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459287.1;locus_tag=C9E95_RS23805;partial=true;product=hypothetical protein;pseudo=true;start_range=.,497;transl_table=11 NZ_PYJW01000141.1 RefSeq gene 1328 3577 . + . ID=gene-C9E95_RS16340;Name=C9E95_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16340;old_locus_tag=C9E95_16740 NZ_PYJW01000141.1 Protein Homology CDS 1328 3577 . + 0 ID=cds-WP_135369868.1;Parent=gene-C9E95_RS16340;Dbxref=GenBank:WP_135369868.1;Name=WP_135369868.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505545.1;locus_tag=C9E95_RS16340;product=type VI secretion system Vgr family protein;protein_id=WP_135369868.1;transl_table=11 NZ_PYJW01000141.1 RefSeq gene 3637 4095 . + . ID=gene-C9E95_RS16345;Name=C9E95_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16345;old_locus_tag=C9E95_16745 NZ_PYJW01000141.1 Protein Homology CDS 3637 4095 . + 0 ID=cds-WP_000186513.1;Parent=gene-C9E95_RS16345;Dbxref=GenBank:WP_000186513.1;Name=WP_000186513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000186512.1;locus_tag=C9E95_RS16345;product=DcrB-related protein;protein_id=WP_000186513.1;transl_table=11 NZ_PYJW01000141.1 RefSeq gene 4111 7648 . + . ID=gene-C9E95_RS23205;Name=C9E95_RS23205;end_range=7648,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23205;partial=true NZ_PYJW01000141.1 Protein Homology CDS 4111 7648 . + 0 ID=cds-WP_167850624.1;Parent=gene-C9E95_RS23205;Dbxref=GenBank:WP_167850624.1;Name=WP_167850624.1;end_range=7648,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001529574.1;locus_tag=C9E95_RS23205;partial=true;product=DUF6531 domain-containing protein;protein_id=WP_167850624.1;transl_table=11 ##sequence-region NZ_PYJW01000165.1 1 404 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000165.1 RefSeq region 1 404 . + . ID=NZ_PYJW01000165.1:1..404;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000165.1 RefSeq pseudogene 1 404 . - . ID=gene-C9E95_RS19550;Name=C9E95_RS19550;end_range=404,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS19550;old_locus_tag=C9E95_20030;partial=true;pseudo=true;start_range=.,1 NZ_PYJW01000165.1 Protein Homology CDS 1 404 . - 0 ID=cds-C9E95_RS19550;Parent=gene-C9E95_RS19550;Note=catalyzes the formation of pyruvate from oxaloacetate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=404,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9E95_RS19550;partial=true;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJW01000102.1 1 7367 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000102.1 RefSeq region 1 7367 . + . ID=NZ_PYJW01000102.1:1..7367;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000102.1 RefSeq pseudogene 1 132 . - . ID=gene-C9E95_RS10915;Name=C9E95_RS10915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS10915;old_locus_tag=C9E95_11195;partial=true;pseudo=true;start_range=.,1 NZ_PYJW01000102.1 Protein Homology CDS 1 132 . - 0 ID=cds-C9E95_RS10915;Parent=gene-C9E95_RS10915;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461995.3;locus_tag=C9E95_RS10915;partial=true;product=alpha/beta fold hydrolase;pseudo=true;start_range=.,1;transl_table=11 NZ_PYJW01000102.1 RefSeq gene 346 819 . - . ID=gene-C9E95_RS10920;Name=C9E95_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10920;old_locus_tag=C9E95_11200 NZ_PYJW01000102.1 Protein Homology CDS 346 819 . - 0 ID=cds-WP_079928002.1;Parent=gene-C9E95_RS10920;Dbxref=GenBank:WP_079928002.1;Name=WP_079928002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461996.1;locus_tag=C9E95_RS10920;product=YhcH/YjgK/YiaL family protein;protein_id=WP_079928002.1;transl_table=11 NZ_PYJW01000102.1 RefSeq gene 858 1865 . - . ID=gene-C9E95_RS10925;Name=C9E95_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10925;old_locus_tag=C9E95_11205 NZ_PYJW01000102.1 Protein Homology CDS 858 1865 . - 0 ID=cds-WP_000104231.1;Parent=gene-C9E95_RS10925;Dbxref=GenBank:WP_000104231.1;Name=WP_000104231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461997.1;locus_tag=C9E95_RS10925;product=Ldh family oxidoreductase;protein_id=WP_000104231.1;transl_table=11 NZ_PYJW01000102.1 RefSeq gene 1879 2895 . - . ID=gene-C9E95_RS10930;Name=C9E95_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10930;old_locus_tag=C9E95_11210 NZ_PYJW01000102.1 Protein Homology CDS 1879 2895 . - 0 ID=cds-WP_000853913.1;Parent=gene-C9E95_RS10930;Dbxref=GenBank:WP_000853913.1;Name=WP_000853913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461998.1;locus_tag=C9E95_RS10930;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_000853913.1;transl_table=11 NZ_PYJW01000102.1 RefSeq gene 2898 4370 . - . ID=gene-C9E95_RS10935;Name=C9E95_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10935;old_locus_tag=C9E95_11215 NZ_PYJW01000102.1 Protein Homology CDS 2898 4370 . - 0 ID=cds-WP_080203961.1;Parent=gene-C9E95_RS10935;Dbxref=GenBank:WP_080203961.1;Name=WP_080203961.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461999.1;locus_tag=C9E95_RS10935;product=mannitol dehydrogenase family protein;protein_id=WP_080203961.1;transl_table=11 NZ_PYJW01000102.1 RefSeq pseudogene 5019 5288 . + . ID=gene-C9E95_RS23615;Name=C9E95_RS23615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23615;pseudo=true NZ_PYJW01000102.1 Protein Homology CDS 5019 5288 . + 0 ID=cds-C9E95_RS23615;Parent=gene-C9E95_RS23615;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014766.6;locus_tag=C9E95_RS23615;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJW01000102.1 RefSeq gene 5603 6403 . - . ID=gene-C9E95_RS10945;Name=C9E95_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10945;old_locus_tag=C9E95_11225 NZ_PYJW01000102.1 Protein Homology CDS 5603 6403 . - 0 ID=cds-WP_001576357.1;Parent=gene-C9E95_RS10945;Dbxref=GenBank:WP_001576357.1;Name=WP_001576357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462000.3;locus_tag=C9E95_RS10945;product=FadR/GntR family transcriptional regulator;protein_id=WP_001576357.1;transl_table=11 NZ_PYJW01000102.1 RefSeq gene 6558 7289 . - . ID=gene-C9E95_RS10950;Name=C9E95_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10950;old_locus_tag=C9E95_11230 NZ_PYJW01000102.1 Protein Homology CDS 6558 7289 . - 0 ID=cds-WP_000032796.1;Parent=gene-C9E95_RS10950;Dbxref=GenBank:WP_000032796.1;Name=WP_000032796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462001.1;locus_tag=C9E95_RS10950;product=hypothetical protein;protein_id=WP_000032796.1;transl_table=11 ##sequence-region NZ_PYJW01000193.1 1 84856 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000193.1 RefSeq region 1 84856 . + . ID=NZ_PYJW01000193.1:1..84856;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000193.1 RefSeq gene 111 1937 . - . ID=gene-C9E95_RS22670;Name=C9E95_RS22670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22670;old_locus_tag=C9E95_23260 NZ_PYJW01000193.1 Protein Homology CDS 111 1937 . - 0 ID=cds-WP_001012856.1;Parent=gene-C9E95_RS22670;Dbxref=GenBank:WP_001012856.1;Name=WP_001012856.1;Ontology_term=GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=C9E95_RS22670;product=SLC13 family permease;protein_id=WP_001012856.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 2014 2691 . - . ID=gene-C9E95_RS22675;Name=C9E95_RS22675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22675;old_locus_tag=C9E95_23265 NZ_PYJW01000193.1 Protein Homology CDS 2014 2691 . - 0 ID=cds-WP_014343872.1;Parent=gene-C9E95_RS22675;Dbxref=GenBank:WP_014343872.1;Name=WP_014343872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461276.3;locus_tag=C9E95_RS22675;product=sugar phosphatase;protein_id=WP_014343872.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 2684 3178 . - . ID=gene-C9E95_RS22680;Name=C9E95_RS22680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22680;old_locus_tag=C9E95_23270 NZ_PYJW01000193.1 Protein Homology CDS 2684 3178 . - 0 ID=cds-WP_000426135.1;Parent=gene-C9E95_RS22680;Dbxref=GenBank:WP_000426135.1;Name=WP_000426135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=C9E95_RS22680;product=YfbU family protein;protein_id=WP_000426135.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 3261 3716 . - . ID=gene-C9E95_RS22685;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=C9E95_RS22685;old_locus_tag=C9E95_23275 NZ_PYJW01000193.1 Protein Homology CDS 3261 3716 . - 0 ID=cds-WP_000106617.1;Parent=gene-C9E95_RS22685;Dbxref=GenBank:WP_000106617.1;Name=WP_000106617.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=C9E95_RS22685;product=terminus macrodomain insulation protein YfbV;protein_id=WP_000106617.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 4055 5257 . + . ID=gene-C9E95_RS22695;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=C9E95_RS22695;old_locus_tag=C9E95_23280 NZ_PYJW01000193.1 Protein Homology CDS 4055 5257 . + 0 ID=cds-WP_000095689.1;Parent=gene-C9E95_RS22695;Dbxref=GenBank:WP_000095689.1;Name=WP_000095689.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=C9E95_RS22695;product=acetate kinase;protein_id=WP_000095689.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 5334 7478 . + . ID=gene-C9E95_RS22700;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=C9E95_RS22700;old_locus_tag=C9E95_23285 NZ_PYJW01000193.1 Protein Homology CDS 5334 7478 . + 0 ID=cds-WP_000086692.1;Parent=gene-C9E95_RS22700;Dbxref=GenBank:WP_000086692.1;Name=WP_000086692.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461280.1;locus_tag=C9E95_RS22700;product=phosphate acetyltransferase;protein_id=WP_000086692.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 7696 9216 . + . ID=gene-C9E95_RS22705;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=C9E95_RS22705;old_locus_tag=C9E95_23290 NZ_PYJW01000193.1 Protein Homology CDS 7696 9216 . + 0 ID=cds-WP_000117931.1;Parent=gene-C9E95_RS22705;Dbxref=GenBank:WP_000117931.1;Name=WP_000117931.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461281.1;locus_tag=C9E95_RS22705;product=putative basic amino acid antiporter YfcC;protein_id=WP_000117931.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 9265 10218 . - . ID=gene-C9E95_RS22710;Name=C9E95_RS22710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22710;old_locus_tag=C9E95_23295 NZ_PYJW01000193.1 Protein Homology CDS 9265 10218 . - 0 ID=cds-WP_000593024.1;Parent=gene-C9E95_RS22710;Dbxref=GenBank:WP_000593024.1;Name=WP_000593024.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461282.1;locus_tag=C9E95_RS22710;product=transketolase family protein;protein_id=WP_000593024.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 10211 11041 . - . ID=gene-C9E95_RS22715;Name=C9E95_RS22715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22715;old_locus_tag=C9E95_23300 NZ_PYJW01000193.1 Protein Homology CDS 10211 11041 . - 0 ID=cds-WP_001103265.1;Parent=gene-C9E95_RS22715;Dbxref=GenBank:WP_001103265.1;Name=WP_001103265.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=C9E95_RS22715;product=transketolase;protein_id=WP_001103265.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 11038 12429 . - . ID=gene-C9E95_RS22720;Name=C9E95_RS22720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22720;old_locus_tag=C9E95_23305 NZ_PYJW01000193.1 Protein Homology CDS 11038 12429 . - 0 ID=cds-WP_001522266.1;Parent=gene-C9E95_RS22720;Dbxref=GenBank:WP_001522266.1;Name=WP_001522266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461284.3;locus_tag=C9E95_RS22720;product=PTS ascorbate transporter subunit IIC;protein_id=WP_001522266.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 12450 12722 . - . ID=gene-C9E95_RS22725;Name=C9E95_RS22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22725;old_locus_tag=C9E95_23310 NZ_PYJW01000193.1 Protein Homology CDS 12450 12722 . - 0 ID=cds-WP_000699818.1;Parent=gene-C9E95_RS22725;Dbxref=GenBank:WP_000699818.1;Name=WP_000699818.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461285.1;locus_tag=C9E95_RS22725;product=PTS sugar transporter subunit IIB;protein_id=WP_000699818.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 12803 13246 . - . ID=gene-C9E95_RS22730;Name=C9E95_RS22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22730;old_locus_tag=C9E95_23315 NZ_PYJW01000193.1 Protein Homology CDS 12803 13246 . - 0 ID=cds-WP_000901809.1;Parent=gene-C9E95_RS22730;Dbxref=GenBank:WP_000901809.1;Name=WP_000901809.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461286.1;locus_tag=C9E95_RS22730;product=PTS sugar transporter subunit IIA;protein_id=WP_000901809.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 13499 14518 . + . ID=gene-C9E95_RS22740;Name=C9E95_RS22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22740;old_locus_tag=C9E95_23325 NZ_PYJW01000193.1 Protein Homology CDS 13499 14518 . + 0 ID=cds-WP_000026949.1;Parent=gene-C9E95_RS22740;Dbxref=GenBank:WP_000026949.1;Name=WP_000026949.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=C9E95_RS22740;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000026949.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 14524 15078 . - . ID=gene-C9E95_RS22745;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=C9E95_RS22745;old_locus_tag=C9E95_23330 NZ_PYJW01000193.1 Protein Homology CDS 14524 15078 . - 0 ID=cds-WP_023994401.1;Parent=gene-C9E95_RS22745;Dbxref=GenBank:WP_023994401.1;Name=WP_023994401.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461288.1;locus_tag=C9E95_RS22745;product=NUDIX hydrolase YfcD;protein_id=WP_023994401.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 15135 15686 . - . ID=gene-C9E95_RS22750;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=C9E95_RS22750;old_locus_tag=C9E95_23335 NZ_PYJW01000193.1 Protein Homology CDS 15135 15686 . - 0 ID=cds-WP_000772458.1;Parent=gene-C9E95_RS22750;Dbxref=GenBank:WP_000772458.1;Name=WP_000772458.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461289.1;locus_tag=C9E95_RS22750;product=phosphodiesterase;protein_id=WP_000772458.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 15742 16386 . - . ID=gene-C9E95_RS22755;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=C9E95_RS22755;old_locus_tag=C9E95_23340 NZ_PYJW01000193.1 Protein Homology CDS 15742 16386 . - 0 ID=cds-WP_000043012.1;Parent=gene-C9E95_RS22755;Dbxref=GenBank:WP_000043012.1;Name=WP_000043012.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461290.1;locus_tag=C9E95_RS22755;product=glutathione transferase;protein_id=WP_000043012.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 16529 17176 . + . ID=gene-C9E95_RS22760;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=C9E95_RS22760;old_locus_tag=C9E95_23345 NZ_PYJW01000193.1 Protein Homology CDS 16529 17176 . + 0 ID=cds-WP_000566563.1;Parent=gene-C9E95_RS22760;Dbxref=GenBank:WP_000566563.1;Name=WP_000566563.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461291.1;locus_tag=C9E95_RS22760;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_000566563.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 17302 18195 . + . ID=gene-C9E95_RS22765;Name=C9E95_RS22765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22765;old_locus_tag=C9E95_23350 NZ_PYJW01000193.1 Protein Homology CDS 17302 18195 . + 0 ID=cds-WP_001166274.1;Parent=gene-C9E95_RS22765;Dbxref=GenBank:WP_001166274.1;Name=WP_001166274.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461292.1;locus_tag=C9E95_RS22765;product=TIGR01777 family oxidoreductase;protein_id=WP_001166274.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 18247 19020 . - . ID=gene-C9E95_RS22770;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=C9E95_RS22770;old_locus_tag=C9E95_23355 NZ_PYJW01000193.1 Protein Homology CDS 18247 19020 . - 0 ID=cds-WP_131040926.1;Parent=gene-C9E95_RS22770;Dbxref=GenBank:WP_131040926.1;Name=WP_131040926.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=C9E95_RS22770;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_131040926.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 19034 19741 . - . ID=gene-C9E95_RS22775;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=C9E95_RS22775;old_locus_tag=C9E95_23360 NZ_PYJW01000193.1 Protein Homology CDS 19034 19741 . - 0 ID=cds-WP_000569771.1;Parent=gene-C9E95_RS22775;Dbxref=GenBank:WP_000569771.1;Name=WP_000569771.1;gbkey=CDS;gene=hisM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461294.1;locus_tag=C9E95_RS22775;product=histidine ABC transporter permease HisM;protein_id=WP_000569771.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 19738 20424 . - . ID=gene-C9E95_RS22780;Name=C9E95_RS22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22780;old_locus_tag=C9E95_23365 NZ_PYJW01000193.1 Protein Homology CDS 19738 20424 . - 0 ID=cds-WP_000965498.1;Parent=gene-C9E95_RS22780;Dbxref=GenBank:WP_000965498.1;Name=WP_000965498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=C9E95_RS22780;product=histidine ABC transporter permease HisQ;protein_id=WP_000965498.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 20605 21387 . - . ID=gene-C9E95_RS22785;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=C9E95_RS22785;old_locus_tag=C9E95_23370 NZ_PYJW01000193.1 Protein Homology CDS 20605 21387 . - 0 ID=cds-WP_000731865.1;Parent=gene-C9E95_RS22785;Dbxref=GenBank:WP_000731865.1;Name=WP_000731865.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461296.1;locus_tag=C9E95_RS22785;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_000731865.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 21625 22407 . - . ID=gene-C9E95_RS22790;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=C9E95_RS22790;old_locus_tag=C9E95_23375 NZ_PYJW01000193.1 Protein Homology CDS 21625 22407 . - 0 ID=cds-WP_000754423.1;Parent=gene-C9E95_RS22790;Dbxref=GenBank:WP_000754423.1;Name=WP_000754423.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461297.1;locus_tag=C9E95_RS22790;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_000754423.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 22696 23265 . - . ID=gene-C9E95_RS22800;Name=C9E95_RS22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22800;old_locus_tag=C9E95_23385 NZ_PYJW01000193.1 Protein Homology CDS 22696 23265 . - 0 ID=cds-WP_000825683.1;Parent=gene-C9E95_RS22800;Dbxref=GenBank:WP_000825683.1;Name=WP_000825683.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461298.1;locus_tag=C9E95_RS22800;product=UbiX family flavin prenyltransferase;protein_id=WP_000825683.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 23292 24698 . - . ID=gene-C9E95_RS22805;Name=C9E95_RS22805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22805;old_locus_tag=C9E95_23390 NZ_PYJW01000193.1 Protein Homology CDS 23292 24698 . - 0 ID=cds-WP_000380346.1;Parent=gene-C9E95_RS22805;Dbxref=GenBank:WP_000380346.1;Name=WP_000380346.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461299.1;locus_tag=C9E95_RS22805;product=amino acid permease;protein_id=WP_000380346.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 24762 25865 . - . ID=gene-C9E95_RS22810;Name=C9E95_RS22810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22810;old_locus_tag=C9E95_23395 NZ_PYJW01000193.1 Protein Homology CDS 24762 25865 . - 0 ID=cds-WP_079787149.1;Parent=gene-C9E95_RS22810;Dbxref=GenBank:WP_079787149.1;Name=WP_079787149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461300.1;locus_tag=C9E95_RS22810;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=WP_079787149.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 25867 27288 . - . ID=gene-C9E95_RS22815;Name=C9E95_RS22815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22815;old_locus_tag=C9E95_23400 NZ_PYJW01000193.1 Protein Homology CDS 25867 27288 . - 0 ID=cds-WP_000072512.1;Parent=gene-C9E95_RS22815;Dbxref=GenBank:WP_000072512.1;Name=WP_000072512.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461301.1;locus_tag=C9E95_RS22815;product=APC family permease;protein_id=WP_000072512.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 27379 28776 . - . ID=gene-C9E95_RS22820;Name=C9E95_RS22820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22820;old_locus_tag=C9E95_23405 NZ_PYJW01000193.1 Protein Homology CDS 27379 28776 . - 0 ID=cds-WP_000132306.1;Parent=gene-C9E95_RS22820;Dbxref=GenBank:WP_000132306.1;Name=WP_000132306.1;Ontology_term=GO:0016831,GO:0030170;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461302.1;locus_tag=C9E95_RS22820;product=diaminopimelate decarboxylase family protein;protein_id=WP_000132306.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 28987 30414 . + . ID=gene-C9E95_RS22825;Name=C9E95_RS22825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22825;old_locus_tag=C9E95_23410 NZ_PYJW01000193.1 Protein Homology CDS 28987 30414 . + 0 ID=cds-WP_000168929.1;Parent=gene-C9E95_RS22825;Dbxref=GenBank:WP_000168929.1;Name=WP_000168929.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461303.1;locus_tag=C9E95_RS22825;product=sigma-54 interaction domain-containing protein;protein_id=WP_000168929.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 30450 31967 . - . ID=gene-C9E95_RS22830;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=C9E95_RS22830;old_locus_tag=C9E95_23415 NZ_PYJW01000193.1 Protein Homology CDS 30450 31967 . - 0 ID=cds-WP_000334205.1;Parent=gene-C9E95_RS22830;Dbxref=GenBank:WP_000334205.1;Name=WP_000334205.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=C9E95_RS22830;product=amidophosphoribosyltransferase;protein_id=WP_000334205.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 32005 32493 . - . ID=gene-C9E95_RS22835;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=C9E95_RS22835;old_locus_tag=C9E95_23420 NZ_PYJW01000193.1 Protein Homology CDS 32005 32493 . - 0 ID=cds-WP_000262102.1;Parent=gene-C9E95_RS22835;Dbxref=GenBank:WP_000262102.1;Name=WP_000262102.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461305.1;locus_tag=C9E95_RS22835;product=colicin V production protein;protein_id=WP_000262102.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 32804 33478 . - . ID=gene-C9E95_RS22840;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=C9E95_RS22840;old_locus_tag=C9E95_23425 NZ_PYJW01000193.1 Protein Homology CDS 32804 33478 . - 0 ID=cds-WP_000157031.1;Parent=gene-C9E95_RS22840;Dbxref=GenBank:WP_000157031.1;Name=WP_000157031.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461306.1;locus_tag=C9E95_RS22840;product=cell division protein DedD;protein_id=WP_000157031.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 33468 34736 . - . ID=gene-C9E95_RS22845;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=C9E95_RS22845;old_locus_tag=C9E95_23430 NZ_PYJW01000193.1 Protein Homology CDS 33468 34736 . - 0 ID=cds-WP_080203999.1;Parent=gene-C9E95_RS22845;Dbxref=GenBank:WP_080203999.1;Name=WP_080203999.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461307.1;locus_tag=C9E95_RS22845;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_080203999.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 34804 35718 . - . ID=gene-C9E95_RS22850;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=C9E95_RS22850;old_locus_tag=C9E95_23435 NZ_PYJW01000193.1 Protein Homology CDS 34804 35718 . - 0 ID=cds-WP_000118383.1;Parent=gene-C9E95_RS22850;Dbxref=GenBank:WP_000118383.1;Name=WP_000118383.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461308.1;locus_tag=C9E95_RS22850;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_000118383.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 35868 36527 . - . ID=gene-C9E95_RS22855;Name=C9E95_RS22855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22855;old_locus_tag=C9E95_23440 NZ_PYJW01000193.1 Protein Homology CDS 35868 36527 . - 0 ID=cds-WP_000364318.1;Parent=gene-C9E95_RS22855;Dbxref=GenBank:WP_000364318.1;Name=WP_000364318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461309.1;locus_tag=C9E95_RS22855;product=DedA family protein;protein_id=WP_000364318.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 36576 37388 . - . ID=gene-C9E95_RS22860;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=C9E95_RS22860;old_locus_tag=C9E95_23445 NZ_PYJW01000193.1 Protein Homology CDS 36576 37388 . - 0 ID=cds-WP_000016631.1;Parent=gene-C9E95_RS22860;Dbxref=GenBank:WP_000016631.1;Name=WP_000016631.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461310.1;locus_tag=C9E95_RS22860;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_000016631.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 37388 38401 . - . ID=gene-C9E95_RS22865;Name=C9E95_RS22865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22865;old_locus_tag=C9E95_23450 NZ_PYJW01000193.1 Protein Homology CDS 37388 38401 . - 0 ID=cds-WP_001289141.1;Parent=gene-C9E95_RS22865;Dbxref=GenBank:WP_001289141.1;Name=WP_001289141.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461311.1;locus_tag=C9E95_RS22865;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_001289141.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 38469 39605 . - . ID=gene-C9E95_RS22870;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=C9E95_RS22870;old_locus_tag=C9E95_23455 NZ_PYJW01000193.1 Protein Homology CDS 38469 39605 . - 0 ID=cds-WP_000699176.1;Parent=gene-C9E95_RS22870;Dbxref=GenBank:WP_000699176.1;Name=WP_000699176.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461312.1;locus_tag=C9E95_RS22870;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_000699176.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 39709 40710 . + . ID=gene-C9E95_RS22875;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=C9E95_RS22875;old_locus_tag=C9E95_23460 NZ_PYJW01000193.1 Protein Homology CDS 39709 40710 . + 0 ID=cds-WP_000553395.1;Parent=gene-C9E95_RS22875;Dbxref=GenBank:WP_000553395.1;Name=WP_000553395.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461313.1;locus_tag=C9E95_RS22875;product=flagella biosynthesis regulator Flk;protein_id=WP_000553395.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 40707 41885 . - . ID=gene-C9E95_RS22880;Name=C9E95_RS22880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22880;old_locus_tag=C9E95_23465 NZ_PYJW01000193.1 Protein Homology CDS 40707 41885 . - 0 ID=cds-WP_000127722.1;Parent=gene-C9E95_RS22880;Dbxref=GenBank:WP_000127722.1;Name=WP_000127722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461314.1;locus_tag=C9E95_RS22880;product=MFS transporter;protein_id=WP_000127722.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 42065 42439 . - . ID=gene-C9E95_RS22885;Name=C9E95_RS22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22885;old_locus_tag=C9E95_23470 NZ_PYJW01000193.1 Protein Homology CDS 42065 42439 . - 0 ID=cds-WP_023138696.1;Parent=gene-C9E95_RS22885;Dbxref=GenBank:WP_023138696.1;Name=WP_023138696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461315.1;locus_tag=C9E95_RS22885;product=hypothetical protein;protein_id=WP_023138696.1;transl_table=11 NZ_PYJW01000193.1 RefSeq pseudogene 42612 42743 . + . ID=gene-C9E95_RS22890;Name=C9E95_RS22890;end_range=42743,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS22890;old_locus_tag=C9E95_23475;partial=true;pseudo=true NZ_PYJW01000193.1 Protein Homology CDS 42612 42743 . + 0 ID=cds-C9E95_RS22890;Parent=gene-C9E95_RS22890;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=42743,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461316.1;locus_tag=C9E95_RS22890;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_PYJW01000193.1 RefSeq pseudogene 42689 43006 . + . ID=gene-C9E95_RS23830;Name=C9E95_RS23830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23830;old_locus_tag=C9E95_23480;partial=true;pseudo=true;start_range=.,42689 NZ_PYJW01000193.1 Protein Homology CDS 42689 43006 . + 0 ID=cds-C9E95_RS23830;Parent=gene-C9E95_RS23830;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461317.1;locus_tag=C9E95_RS23830;partial=true;product=hypothetical protein;pseudo=true;start_range=.,42689;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 43006 43524 . + . ID=gene-C9E95_RS22895;Name=C9E95_RS22895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22895;old_locus_tag=C9E95_23485 NZ_PYJW01000193.1 Protein Homology CDS 43006 43524 . + 0 ID=cds-WP_076735823.1;Parent=gene-C9E95_RS22895;Dbxref=GenBank:WP_076735823.1;Name=WP_076735823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461318.1;locus_tag=C9E95_RS22895;product=YbjP/YqhG family protein;protein_id=WP_076735823.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 43591 44247 . - . ID=gene-C9E95_RS22900;Name=C9E95_RS22900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22900;old_locus_tag=C9E95_23490 NZ_PYJW01000193.1 Protein Homology CDS 43591 44247 . - 0 ID=cds-WP_001142914.1;Parent=gene-C9E95_RS22900;Dbxref=GenBank:WP_001142914.1;Name=WP_001142914.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461319.1;locus_tag=C9E95_RS22900;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_001142914.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 44345 45559 . - . ID=gene-C9E95_RS22905;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=C9E95_RS22905;old_locus_tag=C9E95_23495 NZ_PYJW01000193.1 Protein Homology CDS 44345 45559 . - 0 ID=cds-WP_000817161.1;Parent=gene-C9E95_RS22905;Dbxref=GenBank:WP_000817161.1;Name=WP_000817161.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461320.1;locus_tag=C9E95_RS22905;product=beta-ketoacyl-ACP synthase I;protein_id=WP_000817161.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 45719 47719 . + . ID=gene-C9E95_RS22910;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=C9E95_RS22910;old_locus_tag=C9E95_23500 NZ_PYJW01000193.1 Protein Homology CDS 45719 47719 . + 0 ID=cds-WP_167850626.1;Parent=gene-C9E95_RS22910;Dbxref=GenBank:WP_167850626.1;Name=WP_167850626.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540542.1;locus_tag=C9E95_RS22910;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_167850626.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 47771 48046 . - . ID=gene-C9E95_RS22915;Name=C9E95_RS22915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22915;old_locus_tag=C9E95_23505 NZ_PYJW01000193.1 Protein Homology CDS 47771 48046 . - 0 ID=cds-WP_000559749.1;Parent=gene-C9E95_RS22915;Dbxref=GenBank:WP_000559749.1;Name=WP_000559749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461322.1;locus_tag=C9E95_RS22915;product=YfcL family protein;protein_id=WP_000559749.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 48079 48627 . - . ID=gene-C9E95_RS22920;Name=C9E95_RS22920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22920;old_locus_tag=C9E95_23510 NZ_PYJW01000193.1 Protein Homology CDS 48079 48627 . - 0 ID=cds-WP_001066345.1;Parent=gene-C9E95_RS22920;Dbxref=GenBank:WP_001066345.1;Name=WP_001066345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461323.1;locus_tag=C9E95_RS22920;product=elongation factor P hydroxylase;protein_id=WP_001066345.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 48627 49436 . - . ID=gene-C9E95_RS22925;Name=C9E95_RS22925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22925;old_locus_tag=C9E95_23515 NZ_PYJW01000193.1 Protein Homology CDS 48627 49436 . - 0 ID=cds-WP_000368599.1;Parent=gene-C9E95_RS22925;Dbxref=GenBank:WP_000368599.1;Name=WP_000368599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461324.1;locus_tag=C9E95_RS22925;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000368599.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 49436 50260 . - . ID=gene-C9E95_RS22930;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=C9E95_RS22930;old_locus_tag=C9E95_23520 NZ_PYJW01000193.1 Protein Homology CDS 49436 50260 . - 0 ID=cds-WP_000750429.1;Parent=gene-C9E95_RS22930;Dbxref=GenBank:WP_000750429.1;Name=WP_000750429.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461325.1;locus_tag=C9E95_RS22930;product=penicillin-insensitive murein endopeptidase;protein_id=WP_000750429.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 50264 51349 . - . ID=gene-C9E95_RS22935;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=C9E95_RS22935;old_locus_tag=C9E95_23525 NZ_PYJW01000193.1 Protein Homology CDS 50264 51349 . - 0 ID=cds-WP_000918456.1;Parent=gene-C9E95_RS22935;Dbxref=GenBank:WP_000918456.1;Name=WP_000918456.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=C9E95_RS22935;product=chorismate synthase;protein_id=WP_000918456.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 51385 52317 . - . ID=gene-C9E95_RS22940;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=C9E95_RS22940;old_locus_tag=C9E95_23530 NZ_PYJW01000193.1 Protein Homology CDS 51385 52317 . - 0 ID=cds-WP_001542329.1;Parent=gene-C9E95_RS22940;Dbxref=GenBank:WP_001542329.1;Name=WP_001542329.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=C9E95_RS22940;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_001542329.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 52483 53034 . + . ID=gene-C9E95_RS22945;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=C9E95_RS22945;old_locus_tag=C9E95_23535 NZ_PYJW01000193.1 Protein Homology CDS 52483 53034 . + 0 ID=cds-WP_000730794.1;Parent=gene-C9E95_RS22945;Dbxref=GenBank:WP_000730794.1;Name=WP_000730794.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461328.1;locus_tag=C9E95_RS22945;product=endonuclease SmrB;protein_id=WP_000730794.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 53134 53619 . - . ID=gene-C9E95_RS22950;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=C9E95_RS22950;old_locus_tag=C9E95_23540 NZ_PYJW01000193.1 Protein Homology CDS 53134 53619 . - 0 ID=cds-WP_001195800.1;Parent=gene-C9E95_RS22950;Dbxref=GenBank:WP_001195800.1;Name=WP_001195800.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=C9E95_RS22950;product=phosphohistidine phosphatase SixA;protein_id=WP_001195800.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 53828 55975 . - . ID=gene-C9E95_RS22955;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=C9E95_RS22955;old_locus_tag=C9E95_23545 NZ_PYJW01000193.1 Protein Homology CDS 53828 55975 . - 0 ID=cds-WP_000214145.1;Parent=gene-C9E95_RS22955;Dbxref=GenBank:WP_000214145.1;Name=WP_000214145.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461330.1;locus_tag=C9E95_RS22955;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_000214145.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 55975 57285 . - . ID=gene-C9E95_RS22960;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=C9E95_RS22960;old_locus_tag=C9E95_23550 NZ_PYJW01000193.1 Protein Homology CDS 55975 57285 . - 0 ID=cds-WP_001248130.1;Parent=gene-C9E95_RS22960;Dbxref=GenBank:WP_001248130.1;Name=WP_001248130.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadI;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461331.2;locus_tag=C9E95_RS22960;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_001248130.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 57463 57747 . - . ID=gene-C9E95_RS22965;Name=C9E95_RS22965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22965;old_locus_tag=C9E95_23555 NZ_PYJW01000193.1 Protein Homology CDS 57463 57747 . - 0 ID=cds-WP_000030904.1;Parent=gene-C9E95_RS22965;Dbxref=GenBank:WP_000030904.1;Name=WP_000030904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=C9E95_RS22965;product=YfcZ/YiiS family protein;protein_id=WP_000030904.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 58118 59425 . + . ID=gene-C9E95_RS22970;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=C9E95_RS22970;old_locus_tag=C9E95_23560 NZ_PYJW01000193.1 Protein Homology CDS 58118 59425 . + 0 ID=cds-WP_001533060.1;Parent=gene-C9E95_RS22970;Dbxref=GenBank:WP_001533060.1;Name=WP_001533060.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=C9E95_RS22970;product=long-chain fatty acid transporter FadL;protein_id=WP_001533060.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 59486 60241 . - . ID=gene-C9E95_RS22975;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=C9E95_RS22975;old_locus_tag=C9E95_23565 NZ_PYJW01000193.1 Protein Homology CDS 59486 60241 . - 0 ID=cds-WP_000776787.1;Parent=gene-C9E95_RS22975;Dbxref=GenBank:WP_000776787.1;Name=WP_000776787.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461334.1;locus_tag=C9E95_RS22975;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_000776787.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 60530 61471 . + . ID=gene-C9E95_RS22980;Name=C9E95_RS22980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22980;old_locus_tag=C9E95_23570 NZ_PYJW01000193.1 Protein Homology CDS 60530 61471 . + 0 ID=cds-WP_000377769.1;Parent=gene-C9E95_RS22980;Dbxref=GenBank:WP_000377769.1;Name=WP_000377769.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461335.1;locus_tag=C9E95_RS22980;product=formate/nitrite transporter family protein;protein_id=WP_000377769.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 61547 61621 . + . ID=gene-C9E95_RS22985;Name=C9E95_RS22985;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS22985;old_locus_tag=C9E95_23575 NZ_PYJW01000193.1 tRNAscan-SE tRNA 61547 61621 . + . ID=rna-C9E95_RS22985;Parent=gene-C9E95_RS22985;anticodon=(pos:61580..61582);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS22985;product=tRNA-Arg NZ_PYJW01000193.1 tRNAscan-SE exon 61547 61621 . + . ID=exon-C9E95_RS22985-1;Parent=rna-C9E95_RS22985;anticodon=(pos:61580..61582);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS22985;product=tRNA-Arg NZ_PYJW01000193.1 RefSeq gene 61778 62716 . - . ID=gene-C9E95_RS22990;Name=pgtE;gbkey=Gene;gene=pgtE;gene_biotype=protein_coding;locus_tag=C9E95_RS22990;old_locus_tag=C9E95_23580 NZ_PYJW01000193.1 Protein Homology CDS 61778 62716 . - 0 ID=cds-WP_000716009.1;Parent=gene-C9E95_RS22990;Dbxref=GenBank:WP_000716009.1;Name=WP_000716009.1;gbkey=CDS;gene=pgtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461336.1;locus_tag=C9E95_RS22990;product=omptin family outer membrane protease PgtE;protein_id=WP_000716009.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 62984 64231 . - . ID=gene-C9E95_RS22995;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=protein_coding;locus_tag=C9E95_RS22995;old_locus_tag=C9E95_23585 NZ_PYJW01000193.1 Protein Homology CDS 62984 64231 . - 0 ID=cds-WP_135369893.1;Parent=gene-C9E95_RS22995;Dbxref=GenBank:WP_135369893.1;Name=WP_135369893.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;gene=pgtA;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461337.1;locus_tag=C9E95_RS22995;product=two-component system response regulator PgtA;protein_id=WP_135369893.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 64221 66227 . - . ID=gene-C9E95_RS23000;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=C9E95_RS23000;old_locus_tag=C9E95_23590 NZ_PYJW01000193.1 Protein Homology CDS 64221 66227 . - 0 ID=cds-WP_023993448.1;Parent=gene-C9E95_RS23000;Dbxref=GenBank:WP_023993448.1;Name=WP_023993448.1;Ontology_term=GO:0000160,GO:0000155,GO:0005524;gbkey=CDS;gene=pgtB;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461338.1;locus_tag=C9E95_RS23000;product=two-component system sensor histidine kinase PgtB;protein_id=WP_023993448.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 66224 67417 . - . ID=gene-C9E95_RS23005;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=C9E95_RS23005;old_locus_tag=C9E95_23595 NZ_PYJW01000193.1 Protein Homology CDS 66224 67417 . - 0 ID=cds-WP_000467983.1;Parent=gene-C9E95_RS23005;Dbxref=GenBank:WP_000467983.1;Name=WP_000467983.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461339.1;locus_tag=C9E95_RS23005;product=phosphoglycerate transport regulator PgtC;protein_id=WP_000467983.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 67853 69244 . + . ID=gene-C9E95_RS23015;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=protein_coding;locus_tag=C9E95_RS23015;old_locus_tag=C9E95_23605 NZ_PYJW01000193.1 Protein Homology CDS 67853 69244 . + 0 ID=cds-WP_080203996.1;Parent=gene-C9E95_RS23015;Dbxref=GenBank:WP_080203996.1;Name=WP_080203996.1;Ontology_term=GO:0015760,GO:0035435,GO:0061513;gbkey=CDS;gene=pgtP;go_function=glucose 6-phosphate:phosphate antiporter activity|0061513||IEA;go_process=glucose-6-phosphate transport|0015760||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461340.1;locus_tag=C9E95_RS23015;product=phosphoglycerate transporter PgtP;protein_id=WP_080203996.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 69519 69761 . - . ID=gene-C9E95_RS23020;Name=C9E95_RS23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23020;old_locus_tag=C9E95_23610 NZ_PYJW01000193.1 Protein Homology CDS 69519 69761 . - 0 ID=cds-WP_000639889.1;Parent=gene-C9E95_RS23020;Dbxref=GenBank:WP_000639889.1;Name=WP_000639889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461341.1;locus_tag=C9E95_RS23020;product=YfdY family protein;protein_id=WP_000639889.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 70283 71203 . + . ID=gene-C9E95_RS23025;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=C9E95_RS23025;old_locus_tag=C9E95_23615 NZ_PYJW01000193.1 Protein Homology CDS 70283 71203 . + 0 ID=cds-WP_000484428.1;Parent=gene-C9E95_RS23025;Dbxref=GenBank:WP_000484428.1;Name=WP_000484428.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461342.1;locus_tag=C9E95_RS23025;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_000484428.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 71606 71677 . + . ID=gene-C9E95_RS23030;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=C9E95_RS23030;old_locus_tag=C9E95_23620 NZ_PYJW01000193.1 Protein Homology CDS 71606 71677 . + 0 ID=cds-WP_010723117.1;Parent=gene-C9E95_RS23030;Dbxref=GenBank:WP_010723117.1;Name=WP_010723117.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ypdK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=C9E95_RS23030;product=membrane protein YpdK;protein_id=WP_010723117.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 71727 72965 . - . ID=gene-C9E95_RS23035;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=C9E95_RS23035;old_locus_tag=C9E95_23625 NZ_PYJW01000193.1 Protein Homology CDS 71727 72965 . - 0 ID=cds-WP_000763118.1;Parent=gene-C9E95_RS23035;Dbxref=GenBank:WP_000763118.1;Name=WP_000763118.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461343.1;locus_tag=C9E95_RS23035;product=alanine transaminase;protein_id=WP_000763118.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 73687 74652 . - . ID=gene-C9E95_RS23040;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=C9E95_RS23040;old_locus_tag=C9E95_23630 NZ_PYJW01000193.1 Protein Homology CDS 73687 74652 . - 0 ID=cds-WP_000170376.1;Parent=gene-C9E95_RS23040;Dbxref=GenBank:WP_000170376.1;Name=WP_000170376.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461344.1;locus_tag=C9E95_RS23040;product=glucokinase;protein_id=WP_000170376.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 74857 76092 . + . ID=gene-C9E95_RS23045;Name=C9E95_RS23045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23045;old_locus_tag=C9E95_23635 NZ_PYJW01000193.1 Protein Homology CDS 74857 76092 . + 0 ID=cds-WP_000468920.1;Parent=gene-C9E95_RS23045;Dbxref=GenBank:WP_000468920.1;Name=WP_000468920.1;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461345.1;locus_tag=C9E95_RS23045;product=ion channel protein;protein_id=WP_000468920.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 76112 77764 . - . ID=gene-C9E95_RS23050;Name=C9E95_RS23050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23050;old_locus_tag=C9E95_23640 NZ_PYJW01000193.1 Protein Homology CDS 76112 77764 . - 0 ID=cds-WP_001180860.1;Parent=gene-C9E95_RS23050;Dbxref=GenBank:WP_001180860.1;Name=WP_001180860.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461346.1;locus_tag=C9E95_RS23050;product=alpha-keto acid decarboxylase family protein;protein_id=WP_001180860.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 77944 78942 . + . ID=gene-C9E95_RS23055;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=C9E95_RS23055;old_locus_tag=C9E95_23645 NZ_PYJW01000193.1 Protein Homology CDS 77944 78942 . + 0 ID=cds-WP_000640293.1;Parent=gene-C9E95_RS23055;Dbxref=GenBank:WP_000640293.1;Name=WP_000640293.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461347.1;locus_tag=C9E95_RS23055;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_000640293.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 79056 79382 . + . ID=gene-C9E95_RS23060;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=C9E95_RS23060;old_locus_tag=C9E95_23650 NZ_PYJW01000193.1 Protein Homology CDS 79056 79382 . + 0 ID=cds-WP_000490091.1;Parent=gene-C9E95_RS23060;Dbxref=GenBank:WP_000490091.1;Name=WP_000490091.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461348.1;locus_tag=C9E95_RS23060;product=DUF2502 domain-containing protein YpeC;protein_id=WP_000490091.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 79443 80684 . - . ID=gene-C9E95_RS23065;Name=C9E95_RS23065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23065;old_locus_tag=C9E95_23655 NZ_PYJW01000193.1 Protein Homology CDS 79443 80684 . - 0 ID=cds-WP_000131734.1;Parent=gene-C9E95_RS23065;Dbxref=GenBank:WP_000131734.1;Name=WP_000131734.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461349.1;locus_tag=C9E95_RS23065;product=Nramp family divalent metal transporter;protein_id=WP_000131734.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 80677 80754 . - . ID=gene-C9E95_RS23835;Name=C9E95_RS23835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23835 NZ_PYJW01000193.1 Protein Homology CDS 80677 80754 . - 0 ID=cds-WP_418144572.1;Parent=gene-C9E95_RS23835;Dbxref=GenBank:WP_418144572.1;Name=WP_418144572.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049535.1;locus_tag=C9E95_RS23835;product=hypothetical protein;protein_id=WP_418144572.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 81027 82229 . + . ID=gene-C9E95_RS23070;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=C9E95_RS23070;old_locus_tag=C9E95_23660 NZ_PYJW01000193.1 Protein Homology CDS 81027 82229 . + 0 ID=cds-WP_000376347.1;Parent=gene-C9E95_RS23070;Dbxref=GenBank:WP_000376347.1;Name=WP_000376347.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461350.1;locus_tag=C9E95_RS23070;product=nucleoside permease NupC;protein_id=WP_000376347.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 82282 84471 . - . ID=gene-C9E95_RS23075;Name=C9E95_RS23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23075;old_locus_tag=C9E95_23665 NZ_PYJW01000193.1 Protein Homology CDS 82282 84471 . - 0 ID=cds-WP_001112948.1;Parent=gene-C9E95_RS23075;Dbxref=GenBank:WP_001112948.1;Name=WP_001112948.1;Ontology_term=GO:0000160,GO:0007165,GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461351.1;locus_tag=C9E95_RS23075;product=EAL domain-containing protein;protein_id=WP_001112948.1;transl_table=11 NZ_PYJW01000193.1 RefSeq gene 84662 84737 . - . ID=gene-C9E95_RS23080;Name=C9E95_RS23080;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS23080;old_locus_tag=C9E95_23670 NZ_PYJW01000193.1 tRNAscan-SE tRNA 84662 84737 . - . ID=rna-C9E95_RS23080;Parent=gene-C9E95_RS23080;anticodon=(pos:complement(84702..84704));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS23080;product=tRNA-Ala NZ_PYJW01000193.1 tRNAscan-SE exon 84662 84737 . - . ID=exon-C9E95_RS23080-1;Parent=rna-C9E95_RS23080;anticodon=(pos:complement(84702..84704));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS23080;product=tRNA-Ala NZ_PYJW01000193.1 RefSeq gene 84780 84855 . - . ID=gene-C9E95_RS23085;Name=C9E95_RS23085;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS23085;old_locus_tag=C9E95_23675 NZ_PYJW01000193.1 tRNAscan-SE tRNA 84780 84855 . - . ID=rna-C9E95_RS23085;Parent=gene-C9E95_RS23085;anticodon=(pos:complement(84820..84822));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS23085;product=tRNA-Ala NZ_PYJW01000193.1 tRNAscan-SE exon 84780 84855 . - . ID=exon-C9E95_RS23085-1;Parent=rna-C9E95_RS23085;anticodon=(pos:complement(84820..84822));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS23085;product=tRNA-Ala ##sequence-region NZ_PYJW01000185.1 1 7363 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000185.1 RefSeq region 1 7363 . + . ID=NZ_PYJW01000185.1:1..7363;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000185.1 RefSeq gene 100 510 . - . ID=gene-C9E95_RS21735;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=C9E95_RS21735;old_locus_tag=C9E95_22270 NZ_PYJW01000185.1 Protein Homology CDS 100 510 . - 0 ID=cds-WP_000833182.1;Parent=gene-C9E95_RS21735;Dbxref=GenBank:WP_000833182.1;Name=WP_000833182.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460070.1;locus_tag=C9E95_RS21735;product=hydroxyisourate hydrolase;protein_id=WP_000833182.1;transl_table=11 NZ_PYJW01000185.1 RefSeq gene 646 1101 . + . ID=gene-C9E95_RS21740;Name=C9E95_RS21740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21740;old_locus_tag=C9E95_22275 NZ_PYJW01000185.1 Protein Homology CDS 646 1101 . + 0 ID=cds-WP_135369889.1;Parent=gene-C9E95_RS21740;Dbxref=GenBank:WP_135369889.1;Name=WP_135369889.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698203.1;locus_tag=C9E95_RS21740;product=response regulator;protein_id=WP_135369889.1;transl_table=11 NZ_PYJW01000185.1 RefSeq gene 1094 2458 . + . ID=gene-C9E95_RS21745;Name=C9E95_RS21745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21745;old_locus_tag=C9E95_22280 NZ_PYJW01000185.1 Protein Homology CDS 1094 2458 . + 0 ID=cds-WP_080203872.1;Parent=gene-C9E95_RS21745;Dbxref=GenBank:WP_080203872.1;Name=WP_080203872.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447527.1;locus_tag=C9E95_RS21745;product=heavy metal sensor histidine kinase;protein_id=WP_080203872.1;transl_table=11 NZ_PYJW01000185.1 RefSeq gene 2631 4100 . + . ID=gene-C9E95_RS21750;Name=C9E95_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21750;old_locus_tag=C9E95_22285 NZ_PYJW01000185.1 Protein Homology CDS 2631 4100 . + 0 ID=cds-WP_000760235.1;Parent=gene-C9E95_RS21750;Dbxref=GenBank:WP_000760235.1;Name=WP_000760235.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460067.1;locus_tag=C9E95_RS21750;product=C69 family dipeptidase;protein_id=WP_000760235.1;transl_table=11 NZ_PYJW01000185.1 RefSeq gene 4209 4319 . + . ID=gene-C9E95_RS21755;Name=C9E95_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21755;old_locus_tag=C9E95_22290 NZ_PYJW01000185.1 Protein Homology CDS 4209 4319 . + 0 ID=cds-WP_020898651.1;Parent=gene-C9E95_RS21755;Dbxref=GenBank:WP_020898651.1;Name=WP_020898651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447525.1;locus_tag=C9E95_RS21755;product=hypothetical protein;protein_id=WP_020898651.1;transl_table=11 NZ_PYJW01000185.1 RefSeq gene 4320 4490 . - . ID=gene-C9E95_RS21760;Name=C9E95_RS21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21760;old_locus_tag=C9E95_22295 NZ_PYJW01000185.1 Protein Homology CDS 4320 4490 . - 0 ID=cds-WP_001111006.1;Parent=gene-C9E95_RS21760;Dbxref=GenBank:WP_001111006.1;Name=WP_001111006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460065.1;locus_tag=C9E95_RS21760;product=YlcI/YnfO family protein;protein_id=WP_001111006.1;transl_table=11 NZ_PYJW01000185.1 RefSeq gene 4823 6508 . + . ID=gene-C9E95_RS21765;Name=sopB;gbkey=Gene;gene=sopB;gene_biotype=protein_coding;locus_tag=C9E95_RS21765;old_locus_tag=C9E95_22300 NZ_PYJW01000185.1 Protein Homology CDS 4823 6508 . + 0 ID=cds-WP_080203871.1;Parent=gene-C9E95_RS21765;Dbxref=GenBank:WP_080203871.1;Name=WP_080203871.1;gbkey=CDS;gene=sopB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460064.1;locus_tag=C9E95_RS21765;product=SPI-1 type III secretion system effector inositol phosphate phosphatase SopB;protein_id=WP_080203871.1;transl_table=11 NZ_PYJW01000185.1 RefSeq gene 6525 6866 . + . ID=gene-C9E95_RS21770;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=C9E95_RS21770;old_locus_tag=C9E95_22305 NZ_PYJW01000185.1 Protein Homology CDS 6525 6866 . + 0 ID=cds-WP_000444724.1;Parent=gene-C9E95_RS21770;Dbxref=GenBank:WP_000444724.1;Name=WP_000444724.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460063.1;locus_tag=C9E95_RS21770;product=type III secretion system chaperone SigE;protein_id=WP_000444724.1;transl_table=11 NZ_PYJW01000185.1 RefSeq gene 6876 7196 . - . ID=gene-C9E95_RS21775;Name=C9E95_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21775;old_locus_tag=C9E95_22310 NZ_PYJW01000185.1 Protein Homology CDS 6876 7196 . - 0 ID=cds-WP_080203882.1;Parent=gene-C9E95_RS21775;Dbxref=GenBank:WP_080203882.1;Name=WP_080203882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=C9E95_RS21775;product=hypothetical protein;protein_id=WP_080203882.1;transl_table=11 ##sequence-region NZ_PYJW01000194.1 1 7332 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000194.1 RefSeq region 1 7332 . + . ID=NZ_PYJW01000194.1:1..7332;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000194.1 RefSeq gene 1 993 . + . ID=gene-C9E95_RS23090;Name=C9E95_RS23090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23090;old_locus_tag=C9E95_23680;partial=true;start_range=.,1 NZ_PYJW01000194.1 Protein Homology CDS 1 993 . + 0 ID=cds-WP_245306711.1;Parent=gene-C9E95_RS23090;Dbxref=GenBank:WP_245306711.1;Name=WP_245306711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521019.1;locus_tag=C9E95_RS23090;partial=true;product=PD-(D/E)XK nuclease-like domain-containing protein;protein_id=WP_245306711.1;start_range=.,1;transl_table=11 NZ_PYJW01000194.1 RefSeq gene 986 1816 . + . ID=gene-C9E95_RS23095;Name=recT;gbkey=Gene;gene=recT;gene_biotype=protein_coding;locus_tag=C9E95_RS23095;old_locus_tag=C9E95_23685 NZ_PYJW01000194.1 Protein Homology CDS 986 1816 . + 0 ID=cds-WP_001534364.1;Parent=gene-C9E95_RS23095;Dbxref=GenBank:WP_001534364.1;Name=WP_001534364.1;Ontology_term=GO:0006259,GO:0003677;gbkey=CDS;gene=recT;go_function=DNA binding|0003677||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001126028.1;locus_tag=C9E95_RS23095;product=recombination protein RecT;protein_id=WP_001534364.1;transl_table=11 NZ_PYJW01000194.1 RefSeq gene 1851 2084 . + . ID=gene-C9E95_RS23100;Name=C9E95_RS23100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23100;old_locus_tag=C9E95_23690 NZ_PYJW01000194.1 Protein Homology CDS 1851 2084 . + 0 ID=cds-WP_000070065.1;Parent=gene-C9E95_RS23100;Dbxref=GenBank:WP_000070065.1;Name=WP_000070065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000070065.1;locus_tag=C9E95_RS23100;product=hypothetical protein;protein_id=WP_000070065.1;transl_table=11 NZ_PYJW01000194.1 RefSeq gene 2081 2923 . + . ID=gene-C9E95_RS23105;Name=C9E95_RS23105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23105;old_locus_tag=C9E95_23695 NZ_PYJW01000194.1 Protein Homology CDS 2081 2923 . + 0 ID=cds-WP_058116350.1;Parent=gene-C9E95_RS23105;Dbxref=GenBank:WP_058116350.1;Name=WP_058116350.1;Ontology_term=GO:0032775,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001008259.1;locus_tag=C9E95_RS23105;product=DNA adenine methylase;protein_id=WP_058116350.1;transl_table=11 NZ_PYJW01000194.1 RefSeq gene 2911 3090 . + . ID=gene-C9E95_RS23110;Name=C9E95_RS23110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23110;old_locus_tag=C9E95_23700 NZ_PYJW01000194.1 Protein Homology CDS 2911 3090 . + 0 ID=cds-WP_000276802.1;Parent=gene-C9E95_RS23110;Dbxref=GenBank:WP_000276802.1;Name=WP_000276802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000276802.1;locus_tag=C9E95_RS23110;product=DUF1187 family protein;protein_id=WP_000276802.1;transl_table=11 NZ_PYJW01000194.1 RefSeq gene 3184 3441 . + . ID=gene-C9E95_RS23115;Name=C9E95_RS23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23115;old_locus_tag=C9E95_23705 NZ_PYJW01000194.1 Protein Homology CDS 3184 3441 . + 0 ID=cds-WP_135369894.1;Parent=gene-C9E95_RS23115;Dbxref=GenBank:WP_135369894.1;Name=WP_135369894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524382.1;locus_tag=C9E95_RS23115;product=hypothetical protein;protein_id=WP_135369894.1;transl_table=11 NZ_PYJW01000194.1 RefSeq gene 3438 5522 . + . ID=gene-C9E95_RS23120;Name=C9E95_RS23120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23120;old_locus_tag=C9E95_23710 NZ_PYJW01000194.1 Protein Homology CDS 3438 5522 . + 0 ID=cds-WP_135369895.1;Parent=gene-C9E95_RS23120;Dbxref=GenBank:WP_135369895.1;Name=WP_135369895.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524362.1;locus_tag=C9E95_RS23120;product=DNA cytosine methyltransferase;protein_id=WP_135369895.1;transl_table=11 NZ_PYJW01000194.1 RefSeq gene 5519 5947 . + . ID=gene-C9E95_RS23340;Name=C9E95_RS23340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23340 NZ_PYJW01000194.1 Protein Homology CDS 5519 5947 . + 0 ID=cds-WP_076735563.1;Parent=gene-C9E95_RS23340;Dbxref=GenBank:WP_076735563.1;Name=WP_076735563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000743304.1;locus_tag=C9E95_RS23340;product=hypothetical protein;protein_id=WP_076735563.1;transl_table=11 NZ_PYJW01000194.1 RefSeq gene 6008 6280 . + . ID=gene-C9E95_RS23130;Name=C9E95_RS23130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23130;old_locus_tag=C9E95_23720 NZ_PYJW01000194.1 Protein Homology CDS 6008 6280 . + 0 ID=cds-WP_078061180.1;Parent=gene-C9E95_RS23130;Dbxref=GenBank:WP_078061180.1;Name=WP_078061180.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575998.1;locus_tag=C9E95_RS23130;product=excisionase;protein_id=WP_078061180.1;transl_table=11 NZ_PYJW01000194.1 RefSeq gene 6261 7332 . + . ID=gene-C9E95_RS23135;Name=C9E95_RS23135;end_range=7332,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23135;old_locus_tag=C9E95_23725;partial=true NZ_PYJW01000194.1 Protein Homology CDS 6261 7332 . + 0 ID=cds-WP_135369896.1;Parent=gene-C9E95_RS23135;Dbxref=GenBank:WP_135369896.1;Name=WP_135369896.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=7332,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001189081.1;locus_tag=C9E95_RS23135;partial=true;product=tyrosine-type recombinase/integrase;protein_id=WP_135369896.1;transl_table=11 ##sequence-region NZ_PYJW01000072.1 1 6814 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000072.1 RefSeq region 1 6814 . + . ID=NZ_PYJW01000072.1:1..6814;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000072.1 RefSeq pseudogene 1 120 . + . ID=gene-C9E95_RS07220;Name=sciR;gbkey=Gene;gene=sciR;gene_biotype=pseudogene;locus_tag=C9E95_RS07220;old_locus_tag=C9E95_07390;partial=true;pseudo=true;start_range=.,1 NZ_PYJW01000072.1 Protein Homology CDS 1 120 . + 0 ID=cds-C9E95_RS07220;Parent=gene-C9E95_RS07220;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=sciR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459282.1;locus_tag=C9E95_RS07220;partial=true;product=Shiga-like toxin A subunit SciR;pseudo=true;start_range=.,1;transl_table=11 NZ_PYJW01000072.1 RefSeq gene 154 4023 . + . ID=gene-C9E95_RS07225;Name=icmF;gbkey=Gene;gene=icmF;gene_biotype=protein_coding;locus_tag=C9E95_RS07225;old_locus_tag=C9E95_07395 NZ_PYJW01000072.1 Protein Homology CDS 154 4023 . + 0 ID=cds-WP_080204087.1;Parent=gene-C9E95_RS07225;Dbxref=GenBank:WP_080204087.1;Name=WP_080204087.1;gbkey=CDS;gene=icmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459283.1;locus_tag=C9E95_RS07225;product=Type VI secretion protein IcmF;protein_id=WP_080204087.1;transl_table=11 NZ_PYJW01000072.1 RefSeq gene 4023 4790 . + . ID=gene-C9E95_RS07230;Name=C9E95_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07230;old_locus_tag=C9E95_07400 NZ_PYJW01000072.1 Protein Homology CDS 4023 4790 . + 0 ID=cds-WP_023228810.1;Parent=gene-C9E95_RS07230;Dbxref=GenBank:WP_023228810.1;Name=WP_023228810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254119.1;locus_tag=C9E95_RS07230;product=TagF domain-containing protein;protein_id=WP_023228810.1;transl_table=11 NZ_PYJW01000072.1 RefSeq gene 4833 5303 . + . ID=gene-C9E95_RS07235;Name=C9E95_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07235;old_locus_tag=C9E95_07405 NZ_PYJW01000072.1 Protein Homology CDS 4833 5303 . + 0 ID=cds-WP_000528843.1;Parent=gene-C9E95_RS07235;Dbxref=GenBank:WP_000528843.1;Name=WP_000528843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528842.1;locus_tag=C9E95_RS07235;product=glucosaminidase domain-containing protein;protein_id=WP_000528843.1;transl_table=11 NZ_PYJW01000072.1 RefSeq gene 5288 5749 . + . ID=gene-C9E95_RS07240;Name=C9E95_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07240;old_locus_tag=C9E95_07410 NZ_PYJW01000072.1 Protein Homology CDS 5288 5749 . + 0 ID=cds-WP_001674711.1;Parent=gene-C9E95_RS07240;Dbxref=GenBank:WP_001674711.1;Name=WP_001674711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670388.1;locus_tag=C9E95_RS07240;product=hypothetical protein;protein_id=WP_001674711.1;transl_table=11 NZ_PYJW01000072.1 RefSeq pseudogene 5758 5886 . + . ID=gene-C9E95_RS23260;Name=C9E95_RS23260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23260;partial=true;pseudo=true;start_range=.,5758 NZ_PYJW01000072.1 Protein Homology CDS 5758 5886 . + 0 ID=cds-C9E95_RS23260;Parent=gene-C9E95_RS23260;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254123.1;locus_tag=C9E95_RS23260;partial=true;product=TagF domain-containing protein;pseudo=true;start_range=.,5758;transl_table=11 NZ_PYJW01000072.1 RefSeq gene 5936 6667 . + . ID=gene-C9E95_RS07245;Name=C9E95_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07245;old_locus_tag=C9E95_07415 NZ_PYJW01000072.1 Protein Homology CDS 5936 6667 . + 0 ID=cds-WP_000040883.1;Parent=gene-C9E95_RS07245;Dbxref=GenBank:WP_000040883.1;Name=WP_000040883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000040883.1;locus_tag=C9E95_RS07245;product=hypothetical protein;protein_id=WP_000040883.1;transl_table=11 ##sequence-region NZ_PYJW01000034.1 1 6764 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000034.1 RefSeq region 1 6764 . + . ID=NZ_PYJW01000034.1:1..6764;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000034.1 RefSeq gene 1 306 . - . ID=gene-C9E95_RS02275;Name=sciR;gbkey=Gene;gene=sciR;gene_biotype=protein_coding;locus_tag=C9E95_RS02275;old_locus_tag=C9E95_02320;partial=true;start_range=.,1 NZ_PYJW01000034.1 Protein Homology CDS 1 306 . - 0 ID=cds-WP_135369800.1;Parent=gene-C9E95_RS02275;Dbxref=GenBank:WP_135369800.1;Name=WP_135369800.1;gbkey=CDS;gene=sciR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459282.1;locus_tag=C9E95_RS02275;partial=true;product=Shiga-like toxin A subunit SciR;protein_id=WP_135369800.1;start_range=.,1;transl_table=11 NZ_PYJW01000034.1 RefSeq gene 508 1281 . - . ID=gene-C9E95_RS02280;Name=C9E95_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02280;old_locus_tag=C9E95_02325 NZ_PYJW01000034.1 Protein Homology CDS 508 1281 . - 0 ID=cds-WP_111769909.1;Parent=gene-C9E95_RS02280;Dbxref=GenBank:WP_111769909.1;Name=WP_111769909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459281.1;locus_tag=C9E95_RS02280;product=Rap1a/Tai family immunity protein;protein_id=WP_111769909.1;transl_table=11 NZ_PYJW01000034.1 RefSeq gene 1286 2590 . - . ID=gene-C9E95_RS02285;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=C9E95_RS02285;old_locus_tag=C9E95_02330 NZ_PYJW01000034.1 Protein Homology CDS 1286 2590 . - 0 ID=cds-WP_000132483.1;Parent=gene-C9E95_RS02285;Dbxref=GenBank:WP_000132483.1;Name=WP_000132483.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssL;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459280.1;locus_tag=C9E95_RS02285;product=type VI secretion system protein TssL%2C long form;protein_id=WP_000132483.1;transl_table=11 NZ_PYJW01000034.1 RefSeq gene 2587 3930 . - . ID=gene-C9E95_RS02290;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=C9E95_RS02290;old_locus_tag=C9E95_02335 NZ_PYJW01000034.1 Protein Homology CDS 2587 3930 . - 0 ID=cds-WP_000118732.1;Parent=gene-C9E95_RS02290;Dbxref=GenBank:WP_000118732.1;Name=WP_000118732.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459279.1;locus_tag=C9E95_RS02290;product=type VI secretion system baseplate subunit TssK;protein_id=WP_000118732.1;transl_table=11 NZ_PYJW01000034.1 RefSeq gene 3934 4470 . - . ID=gene-C9E95_RS02295;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=C9E95_RS02295;old_locus_tag=C9E95_02340 NZ_PYJW01000034.1 Protein Homology CDS 3934 4470 . - 0 ID=cds-WP_080204089.1;Parent=gene-C9E95_RS02295;Dbxref=GenBank:WP_080204089.1;Name=WP_080204089.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=C9E95_RS02295;product=type VI secretion system lipoprotein TssJ;protein_id=WP_080204089.1;transl_table=11 NZ_PYJW01000034.1 RefSeq gene 4537 5022 . - . ID=gene-C9E95_RS02300;Name=C9E95_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02300;old_locus_tag=C9E95_02345 NZ_PYJW01000034.1 Protein Homology CDS 4537 5022 . - 0 ID=cds-WP_023228246.1;Parent=gene-C9E95_RS02300;Dbxref=GenBank:WP_023228246.1;Name=WP_023228246.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459274.1;locus_tag=C9E95_RS02300;product=Hcp family type VI secretion system effector;protein_id=WP_023228246.1;transl_table=11 NZ_PYJW01000034.1 RefSeq gene 5165 5548 . - . ID=gene-C9E95_RS02305;Name=C9E95_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02305;old_locus_tag=C9E95_02350 NZ_PYJW01000034.1 Protein Homology CDS 5165 5548 . - 0 ID=cds-WP_000379146.1;Parent=gene-C9E95_RS02305;Dbxref=GenBank:WP_000379146.1;Name=WP_000379146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459276.1;locus_tag=C9E95_RS02305;product=type VI secretion system amidase immunity protein Tai4;protein_id=WP_000379146.1;transl_table=11 NZ_PYJW01000034.1 RefSeq gene 5533 6018 . - . ID=gene-C9E95_RS02310;Name=C9E95_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02310;old_locus_tag=C9E95_02355 NZ_PYJW01000034.1 Protein Homology CDS 5533 6018 . - 0 ID=cds-WP_001081550.1;Parent=gene-C9E95_RS02310;Dbxref=GenBank:WP_001081550.1;Name=WP_001081550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459275.1;locus_tag=C9E95_RS02310;product=type VI secretion system amidase effector protein Tae4;protein_id=WP_001081550.1;transl_table=11 NZ_PYJW01000034.1 RefSeq pseudogene 6061 6253 . - . ID=gene-C9E95_RS23360;Name=C9E95_RS23360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23360;partial=true;pseudo=true;start_range=.,6061 NZ_PYJW01000034.1 Protein Homology CDS 6061 6253 . - 0 ID=cds-C9E95_RS23360;Parent=gene-C9E95_RS23360;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=C9E95_RS23360;partial=true;product=type VI secretion system lipoprotein TssJ;pseudo=true;start_range=.,6061;transl_table=11 NZ_PYJW01000034.1 RefSeq gene 6321 6764 . - . ID=gene-C9E95_RS02315;Name=C9E95_RS02315;end_range=6764,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02315;old_locus_tag=C9E95_02360;partial=true NZ_PYJW01000034.1 Protein Homology CDS 6321 6764 . - 0 ID=cds-WP_210115728.1;Parent=gene-C9E95_RS02315;Dbxref=GenBank:WP_210115728.1;Name=WP_210115728.1;Ontology_term=GO:0033103;end_range=6764,.;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459274.1;locus_tag=C9E95_RS02315;partial=true;product=Hcp family type VI secretion system effector;protein_id=WP_210115728.1;transl_table=11 ##sequence-region NZ_PYJW01000085.1 1 6516 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000085.1 RefSeq region 1 6516 . + . ID=NZ_PYJW01000085.1:1..6516;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000085.1 RefSeq gene 342 1385 . + . ID=gene-C9E95_RS08775;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=C9E95_RS08775;old_locus_tag=C9E95_08995 NZ_PYJW01000085.1 Protein Homology CDS 342 1385 . + 0 ID=cds-WP_023993908.1;Parent=gene-C9E95_RS08775;Dbxref=GenBank:WP_023993908.1;Name=WP_023993908.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=C9E95_RS08775;product=quinolinate synthase NadA;protein_id=WP_023993908.1;transl_table=11 NZ_PYJW01000085.1 RefSeq gene 1410 2129 . + . ID=gene-C9E95_RS08780;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=C9E95_RS08780;old_locus_tag=C9E95_09000 NZ_PYJW01000085.1 Protein Homology CDS 1410 2129 . + 0 ID=cds-WP_000345361.1;Parent=gene-C9E95_RS08780;Dbxref=GenBank:WP_000345361.1;Name=WP_000345361.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459737.1;locus_tag=C9E95_RS08780;product=nicotinamide riboside transporter PnuC;protein_id=WP_000345361.1;transl_table=11 NZ_PYJW01000085.1 RefSeq gene 2126 3064 . - . ID=gene-C9E95_RS08785;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=C9E95_RS08785;old_locus_tag=C9E95_09005 NZ_PYJW01000085.1 Protein Homology CDS 2126 3064 . - 0 ID=cds-WP_000951250.1;Parent=gene-C9E95_RS08785;Dbxref=GenBank:WP_000951250.1;Name=WP_000951250.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459738.1;locus_tag=C9E95_RS08785;product=CDF family zinc transporter ZitB;protein_id=WP_000951250.1;transl_table=11 NZ_PYJW01000085.1 RefSeq gene 3175 3561 . - . ID=gene-C9E95_RS08790;Name=C9E95_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08790;old_locus_tag=C9E95_09010 NZ_PYJW01000085.1 Protein Homology CDS 3175 3561 . - 0 ID=cds-WP_000784380.1;Parent=gene-C9E95_RS08790;Dbxref=GenBank:WP_000784380.1;Name=WP_000784380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459739.1;locus_tag=C9E95_RS08790;product=YbgS-like family protein;protein_id=WP_000784380.1;transl_table=11 NZ_PYJW01000085.1 RefSeq gene 3881 4933 . + . ID=gene-C9E95_RS08795;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=C9E95_RS08795;old_locus_tag=C9E95_09015 NZ_PYJW01000085.1 Protein Homology CDS 3881 4933 . + 0 ID=cds-WP_001109233.1;Parent=gene-C9E95_RS08795;Dbxref=GenBank:WP_001109233.1;Name=WP_001109233.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=C9E95_RS08795;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_001109233.1;transl_table=11 NZ_PYJW01000085.1 RefSeq gene 5027 5572 . - . ID=gene-C9E95_RS08800;Name=C9E95_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08800;old_locus_tag=C9E95_09020 NZ_PYJW01000085.1 Protein Homology CDS 5027 5572 . - 0 ID=cds-WP_000970374.1;Parent=gene-C9E95_RS08800;Dbxref=GenBank:WP_000970374.1;Name=WP_000970374.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459741.1;locus_tag=C9E95_RS08800;product=FumA C-terminus/TtdB family hydratase beta subunit;protein_id=WP_000970374.1;transl_table=11 NZ_PYJW01000085.1 RefSeq gene 5587 6432 . - . ID=gene-C9E95_RS08805;Name=C9E95_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08805;old_locus_tag=C9E95_09025 NZ_PYJW01000085.1 Protein Homology CDS 5587 6432 . - 0 ID=cds-WP_000086831.1;Parent=gene-C9E95_RS08805;Dbxref=GenBank:WP_000086831.1;Name=WP_000086831.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459742.1;locus_tag=C9E95_RS08805;product=fumarate hydratase;protein_id=WP_000086831.1;transl_table=11 ##sequence-region NZ_PYJW01000014.1 1 6363 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000014.1 RefSeq region 1 6363 . + . ID=NZ_PYJW01000014.1:1..6363;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000014.1 RefSeq gene 164 886 . - . ID=gene-C9E95_RS00795;Name=sopE2;gbkey=Gene;gene=sopE2;gene_biotype=protein_coding;locus_tag=C9E95_RS00795;old_locus_tag=C9E95_00810 NZ_PYJW01000014.1 Protein Homology CDS 164 886 . - 0 ID=cds-WP_023240423.1;Parent=gene-C9E95_RS00795;Dbxref=GenBank:WP_023240423.1;Name=WP_023240423.1;gbkey=CDS;gene=sopE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460811.1;locus_tag=C9E95_RS00795;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE2;protein_id=WP_023240423.1;transl_table=11 NZ_PYJW01000014.1 RefSeq gene 1570 1965 . + . ID=gene-C9E95_RS00800;Name=C9E95_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00800;old_locus_tag=C9E95_00815 NZ_PYJW01000014.1 Protein Homology CDS 1570 1965 . + 0 ID=cds-WP_000422890.1;Parent=gene-C9E95_RS00800;Dbxref=GenBank:WP_000422890.1;Name=WP_000422890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460812.1;locus_tag=C9E95_RS00800;product=DUF1398 domain-containing protein;protein_id=WP_000422890.1;transl_table=11 NZ_PYJW01000014.1 RefSeq gene 2295 2771 . + . ID=gene-C9E95_RS00805;Name=C9E95_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00805;old_locus_tag=C9E95_00820 NZ_PYJW01000014.1 Protein Homology CDS 2295 2771 . + 0 ID=cds-WP_000030946.1;Parent=gene-C9E95_RS00805;Dbxref=GenBank:WP_000030946.1;Name=WP_000030946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000030934.1;locus_tag=C9E95_RS00805;product=hypothetical protein;protein_id=WP_000030946.1;transl_table=11 NZ_PYJW01000014.1 RefSeq gene 3158 3577 . - . ID=gene-C9E95_RS00810;Name=C9E95_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00810;old_locus_tag=C9E95_00825 NZ_PYJW01000014.1 Protein Homology CDS 3158 3577 . - 0 ID=cds-WP_000354407.1;Parent=gene-C9E95_RS00810;Dbxref=GenBank:WP_000354407.1;Name=WP_000354407.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460813.1;locus_tag=C9E95_RS00810;product=GNAT family N-acetyltransferase;protein_id=WP_000354407.1;transl_table=11 NZ_PYJW01000014.1 RefSeq gene 3950 4219 . + . ID=gene-C9E95_RS00820;Name=C9E95_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00820;old_locus_tag=C9E95_00835 NZ_PYJW01000014.1 Protein Homology CDS 3950 4219 . + 0 ID=cds-WP_012664556.1;Parent=gene-C9E95_RS00820;Dbxref=GenBank:WP_012664556.1;Name=WP_012664556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460814.1;locus_tag=C9E95_RS00820;product=hypothetical protein;protein_id=WP_012664556.1;transl_table=11 NZ_PYJW01000014.1 RefSeq gene 4385 4525 . + . ID=gene-C9E95_RS00825;Name=C9E95_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00825;old_locus_tag=C9E95_00840 NZ_PYJW01000014.1 Protein Homology CDS 4385 4525 . + 0 ID=cds-WP_001576018.1;Parent=gene-C9E95_RS00825;Dbxref=GenBank:WP_001576018.1;Name=WP_001576018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576018.1;locus_tag=C9E95_RS00825;product=hypothetical protein;protein_id=WP_001576018.1;transl_table=11 NZ_PYJW01000014.1 RefSeq gene 4671 5879 . - . ID=gene-C9E95_RS00830;Name=C9E95_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00830;old_locus_tag=C9E95_00845 NZ_PYJW01000014.1 Protein Homology CDS 4671 5879 . - 0 ID=cds-WP_080204071.1;Parent=gene-C9E95_RS00830;Dbxref=GenBank:WP_080204071.1;Name=WP_080204071.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=C9E95_RS00830;product=IS256 family transposase;protein_id=WP_080204071.1;transl_table=11 NZ_PYJW01000014.1 RefSeq pseudogene 5949 6363 . + . ID=gene-C9E95_RS00835;Name=C9E95_RS00835;end_range=6363,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS00835;old_locus_tag=C9E95_00850;partial=true;pseudo=true;start_range=.,5949 NZ_PYJW01000014.1 Protein Homology CDS 5949 6363 . + 0 ID=cds-C9E95_RS00835;Parent=gene-C9E95_RS00835;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=6363,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001189081.1;locus_tag=C9E95_RS00835;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,5949;transl_table=11 ##sequence-region NZ_PYJW01000120.1 1 6153 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000120.1 RefSeq region 1 6153 . + . ID=NZ_PYJW01000120.1:1..6153;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000120.1 RefSeq gene 1 501 . + . ID=gene-C9E95_RS13120;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=C9E95_RS13120;old_locus_tag=C9E95_13455;partial=true;start_range=.,1 NZ_PYJW01000120.1 Protein Homology CDS 1 501 . + 0 ID=cds-WP_135369848.1;Parent=gene-C9E95_RS13120;Dbxref=GenBank:WP_135369848.1;Name=WP_135369848.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461197.1;locus_tag=C9E95_RS13120;partial=true;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_135369848.1;start_range=.,1;transl_table=11 NZ_PYJW01000120.1 RefSeq gene 498 1157 . + . ID=gene-C9E95_RS13125;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=C9E95_RS13125;old_locus_tag=C9E95_13460 NZ_PYJW01000120.1 Protein Homology CDS 498 1157 . + 0 ID=cds-WP_135369849.1;Parent=gene-C9E95_RS13125;Dbxref=GenBank:WP_135369849.1;Name=WP_135369849.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=C9E95_RS13125;product=heme exporter protein CcmB;protein_id=WP_135369849.1;transl_table=11 NZ_PYJW01000120.1 RefSeq gene 1209 1946 . + . ID=gene-C9E95_RS13130;Name=C9E95_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13130;old_locus_tag=C9E95_13465 NZ_PYJW01000120.1 Protein Homology CDS 1209 1946 . + 0 ID=cds-WP_000265995.1;Parent=gene-C9E95_RS13130;Dbxref=GenBank:WP_000265995.1;Name=WP_000265995.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=C9E95_RS13130;product=heme ABC transporter permease;protein_id=WP_000265995.1;transl_table=11 NZ_PYJW01000120.1 RefSeq gene 1943 2155 . + . ID=gene-C9E95_RS13135;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=C9E95_RS13135;old_locus_tag=C9E95_13470 NZ_PYJW01000120.1 Protein Homology CDS 1943 2155 . + 0 ID=cds-WP_000074110.1;Parent=gene-C9E95_RS13135;Dbxref=GenBank:WP_000074110.1;Name=WP_000074110.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=C9E95_RS13135;product=heme exporter protein CcmD;protein_id=WP_000074110.1;transl_table=11 NZ_PYJW01000120.1 RefSeq gene 2152 2631 . + . ID=gene-C9E95_RS13140;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=C9E95_RS13140;old_locus_tag=C9E95_13475 NZ_PYJW01000120.1 Protein Homology CDS 2152 2631 . + 0 ID=cds-WP_001053607.1;Parent=gene-C9E95_RS13140;Dbxref=GenBank:WP_001053607.1;Name=WP_001053607.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=C9E95_RS13140;product=cytochrome c maturation protein CcmE;protein_id=WP_001053607.1;transl_table=11 NZ_PYJW01000120.1 RefSeq gene 2628 4559 . + . ID=gene-C9E95_RS13145;Name=C9E95_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13145;old_locus_tag=C9E95_13480 NZ_PYJW01000120.1 Protein Homology CDS 2628 4559 . + 0 ID=cds-WP_000982525.1;Parent=gene-C9E95_RS13145;Dbxref=GenBank:WP_000982525.1;Name=WP_000982525.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=C9E95_RS13145;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_000982525.1;transl_table=11 NZ_PYJW01000120.1 RefSeq gene 4556 5113 . + . ID=gene-C9E95_RS13150;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=C9E95_RS13150;old_locus_tag=C9E95_13485 NZ_PYJW01000120.1 Protein Homology CDS 4556 5113 . + 0 ID=cds-WP_080203974.1;Parent=gene-C9E95_RS13150;Dbxref=GenBank:WP_080203974.1;Name=WP_080203974.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=C9E95_RS13150;product=thiol:disulfide interchange protein DsbE;protein_id=WP_080203974.1;transl_table=11 NZ_PYJW01000120.1 RefSeq gene 5110 6153 . + . ID=gene-C9E95_RS13155;Name=C9E95_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13155;old_locus_tag=C9E95_13490 NZ_PYJW01000120.1 Protein Homology CDS 5110 6153 . + 0 ID=cds-WP_119026679.1;Parent=gene-C9E95_RS13155;Dbxref=GenBank:WP_119026679.1;Name=WP_119026679.1;Ontology_term=GO:0017004,GO:0015035,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=protein-disulfide reductase activity|0015035||IEA,metal ion binding|0046872||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=C9E95_RS13155;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_119026679.1;transl_table=11 ##sequence-region NZ_PYJW01000080.1 1 390 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000080.1 RefSeq region 1 390 . + . ID=NZ_PYJW01000080.1:1..390;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000080.1 RefSeq gene 1 337 . - . ID=gene-C9E95_RS08180;Name=tinR;gbkey=Gene;gene=tinR;gene_biotype=protein_coding;locus_tag=C9E95_RS08180;old_locus_tag=C9E95_08375;partial=true;start_range=.,1 NZ_PYJW01000080.1 Protein Homology CDS 1 337 . - 0 ID=cds-WP_045716103.1;Parent=gene-C9E95_RS08180;Dbxref=GenBank:WP_045716103.1;Name=WP_045716103.1;gbkey=CDS;gene=tinR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219490.1;locus_tag=C9E95_RS08180;partial=true;product=Lrp/AsnC family transcriptional regulator TinR;protein_id=WP_045716103.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJW01000155.1 1 5886 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000155.1 RefSeq region 1 5886 . + . ID=NZ_PYJW01000155.1:1..5886;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000155.1 RefSeq gene 437 1294 . + . ID=gene-C9E95_RS18240;Name=C9E95_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18240;old_locus_tag=C9E95_18695 NZ_PYJW01000155.1 Protein Homology CDS 437 1294 . + 0 ID=cds-WP_001278066.1;Parent=gene-C9E95_RS18240;Dbxref=GenBank:WP_001278066.1;Name=WP_001278066.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462658.4;locus_tag=C9E95_RS18240;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001278066.1;transl_table=11 NZ_PYJW01000155.1 RefSeq gene 1305 1769 . + . ID=gene-C9E95_RS18245;Name=C9E95_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18245;old_locus_tag=C9E95_18700 NZ_PYJW01000155.1 Protein Homology CDS 1305 1769 . + 0 ID=cds-WP_001521985.1;Parent=gene-C9E95_RS18245;Dbxref=GenBank:WP_001521985.1;Name=WP_001521985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462657.1;locus_tag=C9E95_RS18245;product=hypothetical protein;protein_id=WP_001521985.1;transl_table=11 NZ_PYJW01000155.1 RefSeq gene 1864 4731 . - . ID=gene-C9E95_RS18250;Name=misL;gbkey=Gene;gene=misL;gene_biotype=protein_coding;locus_tag=C9E95_RS18250;old_locus_tag=C9E95_18705 NZ_PYJW01000155.1 Protein Homology CDS 1864 4731 . - 0 ID=cds-WP_080203804.1;Parent=gene-C9E95_RS18250;Dbxref=GenBank:WP_080203804.1;Name=WP_080203804.1;gbkey=CDS;gene=misL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462656.1;locus_tag=C9E95_RS18250;product=intestinal colonization autotransporter adhesin MisL;protein_id=WP_080203804.1;transl_table=11 NZ_PYJW01000155.1 RefSeq gene 4806 5423 . - . ID=gene-C9E95_RS18255;Name=C9E95_RS18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18255;old_locus_tag=C9E95_18710 NZ_PYJW01000155.1 Protein Homology CDS 4806 5423 . - 0 ID=cds-WP_000984812.1;Parent=gene-C9E95_RS18255;Dbxref=GenBank:WP_000984812.1;Name=WP_000984812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462655.1;locus_tag=C9E95_RS18255;product=helix-turn-helix transcriptional regulator;protein_id=WP_000984812.1;transl_table=11 ##sequence-region NZ_PYJW01000067.1 1 5798 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000067.1 RefSeq region 1 5798 . + . ID=NZ_PYJW01000067.1:1..5798;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000067.1 RefSeq gene 286 1443 . + . ID=gene-C9E95_RS06615;Name=C9E95_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06615;old_locus_tag=C9E95_06770 NZ_PYJW01000067.1 Protein Homology CDS 286 1443 . + 0 ID=cds-WP_000160383.1;Parent=gene-C9E95_RS06615;Dbxref=GenBank:WP_000160383.1;Name=WP_000160383.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=C9E95_RS06615;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_000160383.1;transl_table=11 NZ_PYJW01000067.1 RefSeq gene 1455 4568 . + . ID=gene-C9E95_RS06620;Name=C9E95_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06620;old_locus_tag=C9E95_06775 NZ_PYJW01000067.1 Protein Homology CDS 1455 4568 . + 0 ID=cds-WP_001524677.1;Parent=gene-C9E95_RS06620;Dbxref=GenBank:WP_001524677.1;Name=WP_001524677.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=C9E95_RS06620;product=efflux RND transporter permease subunit;protein_id=WP_001524677.1;transl_table=11 NZ_PYJW01000067.1 RefSeq gene 4805 5026 . + . ID=gene-C9E95_RS06625;Name=C9E95_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06625;old_locus_tag=C9E95_06780 NZ_PYJW01000067.1 Protein Homology CDS 4805 5026 . + 0 ID=cds-WP_000825645.1;Parent=gene-C9E95_RS06625;Dbxref=GenBank:WP_000825645.1;Name=WP_000825645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462302.1;locus_tag=C9E95_RS06625;product=membrane protein;protein_id=WP_000825645.1;transl_table=11 ##sequence-region NZ_PYJW01000018.1 1 4919 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000018.1 RefSeq region 1 4919 . + . ID=NZ_PYJW01000018.1:1..4919;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000018.1 RefSeq gene 177 1403 . + . ID=gene-C9E95_RS01055;Name=C9E95_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01055;old_locus_tag=C9E95_01070 NZ_PYJW01000018.1 Protein Homology CDS 177 1403 . + 0 ID=cds-WP_000809946.1;Parent=gene-C9E95_RS01055;Dbxref=GenBank:WP_000809946.1;Name=WP_000809946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462711.1;locus_tag=C9E95_RS01055;product=DUF3748 domain-containing protein;protein_id=WP_000809946.1;transl_table=11 NZ_PYJW01000018.1 RefSeq gene 1405 1737 . - . ID=gene-C9E95_RS01060;Name=C9E95_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01060;old_locus_tag=C9E95_01075 NZ_PYJW01000018.1 Protein Homology CDS 1405 1737 . - 0 ID=cds-WP_001581211.1;Parent=gene-C9E95_RS01060;Dbxref=GenBank:WP_001581211.1;Name=WP_001581211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675643.1;locus_tag=C9E95_RS01060;product=YceK/YidQ family lipoprotein;protein_id=WP_001581211.1;transl_table=11 NZ_PYJW01000018.1 cmsearch sequence_feature 1980 2053 . + . ID=id-NZ_PYJW01000018.1:1980..2053;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_PYJW01000018.1 RefSeq gene 2047 2460 . + . ID=gene-C9E95_RS01065;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=C9E95_RS01065;old_locus_tag=C9E95_01080 NZ_PYJW01000018.1 Protein Homology CDS 2047 2460 . + 0 ID=cds-WP_001532742.1;Parent=gene-C9E95_RS01065;Dbxref=GenBank:WP_001532742.1;Name=WP_001532742.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpA;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=C9E95_RS01065;product=small heat shock chaperone IbpA;protein_id=WP_001532742.1;transl_table=11 NZ_PYJW01000018.1 RefSeq gene 2570 2998 . + . ID=gene-C9E95_RS01070;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=C9E95_RS01070;old_locus_tag=C9E95_01085 NZ_PYJW01000018.1 Protein Homology CDS 2570 2998 . + 0 ID=cds-WP_001246919.1;Parent=gene-C9E95_RS01070;Dbxref=GenBank:WP_001246919.1;Name=WP_001246919.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpB;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462708.3;locus_tag=C9E95_RS01070;product=small heat shock chaperone IbpB;protein_id=WP_001246919.1;transl_table=11 NZ_PYJW01000018.1 RefSeq gene 3187 4848 . + . ID=gene-C9E95_RS01075;Name=C9E95_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01075;old_locus_tag=C9E95_01090 NZ_PYJW01000018.1 Protein Homology CDS 3187 4848 . + 0 ID=cds-WP_001279793.1;Parent=gene-C9E95_RS01075;Dbxref=GenBank:WP_001279793.1;Name=WP_001279793.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462707.1;locus_tag=C9E95_RS01075;product=putative transporter;protein_id=WP_001279793.1;transl_table=11 ##sequence-region NZ_PYJW01000071.1 1 80233 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000071.1 RefSeq region 1 80233 . + . ID=NZ_PYJW01000071.1:1..80233;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000071.1 RefSeq gene 28 1305 . + . ID=gene-C9E95_RS06930;Name=siiD;gbkey=Gene;gene=siiD;gene_biotype=protein_coding;locus_tag=C9E95_RS06930;old_locus_tag=C9E95_07085 NZ_PYJW01000071.1 Protein Homology CDS 28 1305 . + 0 ID=cds-WP_001081935.1;Parent=gene-C9E95_RS06930;Dbxref=GenBank:WP_001081935.1;Name=WP_001081935.1;gbkey=CDS;gene=siiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463125.1;locus_tag=C9E95_RS06930;product=SPI-4 type I secretion system protein SiiD;protein_id=WP_001081935.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 1322 18007 . + . ID=gene-C9E95_RS06935;Name=siiE;gbkey=Gene;gene=siiE;gene_biotype=protein_coding;locus_tag=C9E95_RS06935;old_locus_tag=C9E95_07090 NZ_PYJW01000071.1 Protein Homology CDS 1322 18007 . + 0 ID=cds-WP_135369827.1;Parent=gene-C9E95_RS06935;Dbxref=GenBank:WP_135369827.1;Name=WP_135369827.1;gbkey=CDS;gene=siiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=C9E95_RS06935;product=non-fimbrial adhesin SiiE;protein_id=WP_135369827.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 18047 20113 . + . ID=gene-C9E95_RS06940;Name=siiF;gbkey=Gene;gene=siiF;gene_biotype=protein_coding;locus_tag=C9E95_RS06940;old_locus_tag=C9E95_07095 NZ_PYJW01000071.1 Protein Homology CDS 18047 20113 . + 0 ID=cds-WP_000358577.1;Parent=gene-C9E95_RS06940;Dbxref=GenBank:WP_000358577.1;Name=WP_000358577.1;gbkey=CDS;gene=siiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463127.1;locus_tag=C9E95_RS06940;product=SPI-4 type I secretion system protein SiiF;protein_id=WP_000358577.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 20391 20672 . - . ID=gene-C9E95_RS06945;Name=C9E95_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06945;old_locus_tag=C9E95_07100 NZ_PYJW01000071.1 Protein Homology CDS 20391 20672 . - 0 ID=cds-WP_000719058.1;Parent=gene-C9E95_RS06945;Dbxref=GenBank:WP_000719058.1;Name=WP_000719058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463128.1;locus_tag=C9E95_RS06945;product=YjcB family protein;protein_id=WP_000719058.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 21234 22835 . + . ID=gene-C9E95_RS06950;Name=C9E95_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06950;old_locus_tag=C9E95_07105 NZ_PYJW01000071.1 Protein Homology CDS 21234 22835 . + 0 ID=cds-WP_000083651.1;Parent=gene-C9E95_RS06950;Dbxref=GenBank:WP_000083651.1;Name=WP_000083651.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463129.1;locus_tag=C9E95_RS06950;product=EAL domain-containing protein;protein_id=WP_000083651.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 22823 23146 . - . ID=gene-C9E95_RS06955;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=C9E95_RS06955;old_locus_tag=C9E95_07110 NZ_PYJW01000071.1 Protein Homology CDS 22823 23146 . - 0 ID=cds-WP_000019483.1;Parent=gene-C9E95_RS06955;Dbxref=GenBank:WP_000019483.1;Name=WP_000019483.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463130.1;locus_tag=C9E95_RS06955;product=superoxide response transcriptional regulator SoxS;protein_id=WP_000019483.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 23233 23691 . + . ID=gene-C9E95_RS06960;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=C9E95_RS06960;old_locus_tag=C9E95_07115 NZ_PYJW01000071.1 Protein Homology CDS 23233 23691 . + 0 ID=cds-WP_000412686.1;Parent=gene-C9E95_RS06960;Dbxref=GenBank:WP_000412686.1;Name=WP_000412686.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463131.1;locus_tag=C9E95_RS06960;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412686.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 23984 24652 . + . ID=gene-C9E95_RS06965;Name=C9E95_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06965;old_locus_tag=C9E95_07120 NZ_PYJW01000071.1 Protein Homology CDS 23984 24652 . + 0 ID=cds-WP_000958575.1;Parent=gene-C9E95_RS06965;Dbxref=GenBank:WP_000958575.1;Name=WP_000958575.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463132.1;locus_tag=C9E95_RS06965;product=glutathione S-transferase family protein;protein_id=WP_000958575.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 25000 26349 . + . ID=gene-C9E95_RS06970;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=C9E95_RS06970;old_locus_tag=C9E95_07130 NZ_PYJW01000071.1 Protein Homology CDS 25000 26349 . + 0 ID=cds-WP_000106901.1;Parent=gene-C9E95_RS06970;Dbxref=GenBank:WP_000106901.1;Name=WP_000106901.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=C9E95_RS06970;product=guanine/hypoxanthine transporter GhxP;protein_id=WP_000106901.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 26499 28145 . + . ID=gene-C9E95_RS06980;Name=C9E95_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06980;old_locus_tag=C9E95_07140 NZ_PYJW01000071.1 Protein Homology CDS 26499 28145 . + 0 ID=cds-WP_000402189.1;Parent=gene-C9E95_RS06980;Dbxref=GenBank:WP_000402189.1;Name=WP_000402189.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463134.1;locus_tag=C9E95_RS06980;product=Na+/H+ antiporter;protein_id=WP_000402189.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 28240 29127 . - . ID=gene-C9E95_RS06985;Name=C9E95_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06985;old_locus_tag=C9E95_07145 NZ_PYJW01000071.1 Protein Homology CDS 28240 29127 . - 0 ID=cds-WP_000354962.1;Parent=gene-C9E95_RS06985;Dbxref=GenBank:WP_000354962.1;Name=WP_000354962.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463135.1;locus_tag=C9E95_RS06985;product=LysR family transcriptional regulator;protein_id=WP_000354962.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 29231 29641 . + . ID=gene-C9E95_RS06990;Name=C9E95_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06990;old_locus_tag=C9E95_07150 NZ_PYJW01000071.1 Protein Homology CDS 29231 29641 . + 0 ID=cds-WP_000257347.1;Parent=gene-C9E95_RS06990;Dbxref=GenBank:WP_000257347.1;Name=WP_000257347.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463136.1;locus_tag=C9E95_RS06990;product=CidA/LrgA family protein;protein_id=WP_000257347.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 29634 30323 . + . ID=gene-C9E95_RS06995;Name=C9E95_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06995;old_locus_tag=C9E95_07155 NZ_PYJW01000071.1 Protein Homology CDS 29634 30323 . + 0 ID=cds-WP_001067096.1;Parent=gene-C9E95_RS06995;Dbxref=GenBank:WP_001067096.1;Name=WP_001067096.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463137.1;locus_tag=C9E95_RS06995;product=LrgB family protein;protein_id=WP_001067096.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 30362 32011 . - . ID=gene-C9E95_RS07000;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=C9E95_RS07000;old_locus_tag=C9E95_07160 NZ_PYJW01000071.1 Protein Homology CDS 30362 32011 . - 0 ID=cds-WP_000832536.1;Parent=gene-C9E95_RS07000;Dbxref=GenBank:WP_000832536.1;Name=WP_000832536.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463138.1;locus_tag=C9E95_RS07000;product=cation/acetate symporter ActP;protein_id=WP_000832536.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 32008 32322 . - . ID=gene-C9E95_RS07005;Name=C9E95_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07005;old_locus_tag=C9E95_07165 NZ_PYJW01000071.1 Protein Homology CDS 32008 32322 . - 0 ID=cds-WP_000999620.1;Parent=gene-C9E95_RS07005;Dbxref=GenBank:WP_000999620.1;Name=WP_000999620.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463139.1;locus_tag=C9E95_RS07005;product=DUF485 domain-containing protein;protein_id=WP_000999620.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 32562 34520 . - . ID=gene-C9E95_RS07010;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=C9E95_RS07010;old_locus_tag=C9E95_07175 NZ_PYJW01000071.1 Protein Homology CDS 32562 34520 . - 0 ID=cds-WP_021001033.1;Parent=gene-C9E95_RS07010;Dbxref=GenBank:WP_021001033.1;Name=WP_021001033.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463140.1;locus_tag=C9E95_RS07010;product=acetate--CoA ligase;protein_id=WP_021001033.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 34952 36388 . + . ID=gene-C9E95_RS07015;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=C9E95_RS07015;old_locus_tag=C9E95_07185 NZ_PYJW01000071.1 Protein Homology CDS 34952 36388 . + 0 ID=cds-WP_001527354.1;Parent=gene-C9E95_RS07015;Dbxref=GenBank:WP_001527354.1;Name=WP_001527354.1;Ontology_term=GO:0008152,GO:0005509,GO:0020037,GO:0042279,GO:0042597;gbkey=CDS;gene=nrfA;go_component=periplasmic space|0042597||IEA;go_function=calcium ion binding|0005509||IEA,heme binding|0020037||IEA,nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463142.1;locus_tag=C9E95_RS07015;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_001527354.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 36500 37066 . + . ID=gene-C9E95_RS07020;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=C9E95_RS07020;old_locus_tag=C9E95_07190 NZ_PYJW01000071.1 Protein Homology CDS 36500 37066 . + 0 ID=cds-WP_000115065.1;Parent=gene-C9E95_RS07020;Dbxref=GenBank:WP_000115065.1;Name=WP_000115065.1;Ontology_term=GO:0008152,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=C9E95_RS07020;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_000115065.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 37063 37734 . + . ID=gene-C9E95_RS07025;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=C9E95_RS07025;old_locus_tag=C9E95_07195 NZ_PYJW01000071.1 Protein Homology CDS 37063 37734 . + 0 ID=cds-WP_001278025.1;Parent=gene-C9E95_RS07025;Dbxref=GenBank:WP_001278025.1;Name=WP_001278025.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463144.1;locus_tag=C9E95_RS07025;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_001278025.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 37731 38687 . + . ID=gene-C9E95_RS07030;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=C9E95_RS07030;old_locus_tag=C9E95_07200 NZ_PYJW01000071.1 Protein Homology CDS 37731 38687 . + 0 ID=cds-WP_021001034.1;Parent=gene-C9E95_RS07030;Dbxref=GenBank:WP_021001034.1;Name=WP_021001034.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463145.1;locus_tag=C9E95_RS07030;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_021001034.1;transl_table=11 NZ_PYJW01000071.1 RefSeq pseudogene 38680 40918 . + . ID=gene-C9E95_RS07035;Name=nrfEF;gbkey=Gene;gene=nrfEF;gene_biotype=pseudogene;locus_tag=C9E95_RS07035;old_locus_tag=C9E95_07205;pseudo=true NZ_PYJW01000071.1 Protein Homology CDS 38680 40918 . + 0 ID=cds-C9E95_RS07035;Parent=gene-C9E95_RS07035;Note=frameshifted%3B internal stop;gbkey=CDS;gene=nrfEF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=C9E95_RS07035;product=heme lyase NrfEFG subunit NrfEF;pseudo=true;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 40915 41535 . + . ID=gene-C9E95_RS07045;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=C9E95_RS07045;old_locus_tag=C9E95_07215 NZ_PYJW01000071.1 Protein Homology CDS 40915 41535 . + 0 ID=cds-WP_000083232.1;Parent=gene-C9E95_RS07045;Dbxref=GenBank:WP_000083232.1;Name=WP_000083232.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463147.1;locus_tag=C9E95_RS07045;product=heme lyase NrfEFG subunit NrfG;protein_id=WP_000083232.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 41880 43190 . + . ID=gene-C9E95_RS07050;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=C9E95_RS07050;old_locus_tag=C9E95_07220 NZ_PYJW01000071.1 Protein Homology CDS 41880 43190 . + 0 ID=cds-WP_000793278.1;Parent=gene-C9E95_RS07050;Dbxref=GenBank:WP_000793278.1;Name=WP_000793278.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463148.1;locus_tag=C9E95_RS07050;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_000793278.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 43348 44037 . - . ID=gene-C9E95_RS07055;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=C9E95_RS07055;old_locus_tag=C9E95_07225 NZ_PYJW01000071.1 Protein Homology CDS 43348 44037 . - 0 ID=cds-WP_000771454.1;Parent=gene-C9E95_RS07055;Dbxref=GenBank:WP_000771454.1;Name=WP_000771454.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463149.1;locus_tag=C9E95_RS07055;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WP_000771454.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 44214 46361 . - . ID=gene-C9E95_RS07060;Name=C9E95_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07060;old_locus_tag=C9E95_07230 NZ_PYJW01000071.1 Protein Homology CDS 44214 46361 . - 0 ID=cds-WP_011233236.1;Parent=gene-C9E95_RS07060;Dbxref=GenBank:WP_011233236.1;Name=WP_011233236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=C9E95_RS07060;product=formate dehydrogenase H subunit alpha%2C selenocysteine-containing;protein_id=WP_011233236.1;transl_except=(pos:complement(45942..45944)%2Caa:Sec);transl_table=11 NZ_PYJW01000071.1 RefSeq gene 46716 47624 . - . ID=gene-C9E95_RS07065;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=C9E95_RS07065;old_locus_tag=C9E95_07235 NZ_PYJW01000071.1 Protein Homology CDS 46716 47624 . - 0 ID=cds-WP_000457033.1;Parent=gene-C9E95_RS07065;Dbxref=GenBank:WP_000457033.1;Name=WP_000457033.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463151.1;locus_tag=C9E95_RS07065;product=lipid A hydroxylase LpxO;protein_id=WP_000457033.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 47882 48316 . - . ID=gene-C9E95_RS07070;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=C9E95_RS07070;old_locus_tag=C9E95_07240 NZ_PYJW01000071.1 Protein Homology CDS 47882 48316 . - 0 ID=cds-WP_001674343.1;Parent=gene-C9E95_RS07070;Dbxref=GenBank:WP_001674343.1;Name=WP_001674343.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=C9E95_RS07070;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WP_001674343.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 48468 48911 . - . ID=gene-C9E95_RS07075;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=C9E95_RS07075;old_locus_tag=C9E95_07245 NZ_PYJW01000071.1 Protein Homology CDS 48468 48911 . - 0 ID=cds-WP_001131305.1;Parent=gene-C9E95_RS07075;Dbxref=GenBank:WP_001131305.1;Name=WP_001131305.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463153.1;locus_tag=C9E95_RS07075;product=VOC family metalloprotein YjdN;protein_id=WP_001131305.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 49031 49366 . - . ID=gene-C9E95_RS07080;Name=C9E95_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07080;old_locus_tag=C9E95_07250 NZ_PYJW01000071.1 Protein Homology CDS 49031 49366 . - 0 ID=cds-WP_000056482.1;Parent=gene-C9E95_RS07080;Dbxref=GenBank:WP_000056482.1;Name=WP_000056482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463154.1;locus_tag=C9E95_RS07080;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_000056482.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 49834 51336 . + . ID=gene-C9E95_RS07085;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=C9E95_RS07085;old_locus_tag=C9E95_07255 NZ_PYJW01000071.1 Protein Homology CDS 49834 51336 . + 0 ID=cds-WP_000919710.1;Parent=gene-C9E95_RS07085;Dbxref=GenBank:WP_000919710.1;Name=WP_000919710.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463155.1;locus_tag=C9E95_RS07085;product=glycine betaine/L-proline transporter ProP;protein_id=WP_000919710.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 51406 51495 . + . ID=gene-C9E95_RS07090;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=C9E95_RS07090;old_locus_tag=C9E95_07260 NZ_PYJW01000071.1 Protein Homology CDS 51406 51495 . + 0 ID=cds-WP_000844399.1;Parent=gene-C9E95_RS07090;Dbxref=GenBank:WP_000844399.1;Name=WP_000844399.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844399.1;locus_tag=C9E95_RS07090;product=LpxT activity modulator PmrR;protein_id=WP_000844399.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 51503 52573 . - . ID=gene-C9E95_RS07095;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=C9E95_RS07095;old_locus_tag=C9E95_07265 NZ_PYJW01000071.1 Protein Homology CDS 51503 52573 . - 0 ID=cds-WP_001212189.1;Parent=gene-C9E95_RS07095;Dbxref=GenBank:WP_001212189.1;Name=WP_001212189.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463156.1;locus_tag=C9E95_RS07095;product=two-component system sensor histidine kinase PmrB;protein_id=WP_001212189.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 52583 53251 . - . ID=gene-C9E95_RS07100;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=C9E95_RS07100;old_locus_tag=C9E95_07270 NZ_PYJW01000071.1 Protein Homology CDS 52583 53251 . - 0 ID=cds-WP_000697899.1;Parent=gene-C9E95_RS07100;Dbxref=GenBank:WP_000697899.1;Name=WP_000697899.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463157.1;locus_tag=C9E95_RS07100;product=two-component system response regulator PmrA;protein_id=WP_000697899.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 53248 54891 . - . ID=gene-C9E95_RS07105;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=C9E95_RS07105;old_locus_tag=C9E95_07275 NZ_PYJW01000071.1 Protein Homology CDS 53248 54891 . - 0 ID=cds-WP_000919294.1;Parent=gene-C9E95_RS07105;Dbxref=GenBank:WP_000919294.1;Name=WP_000919294.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463158.1;locus_tag=C9E95_RS07105;product=phosphoethanolamine transferase EptA;protein_id=WP_000919294.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 55025 56362 . - . ID=gene-C9E95_RS07110;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=C9E95_RS07110;old_locus_tag=C9E95_07280 NZ_PYJW01000071.1 Protein Homology CDS 55025 56362 . - 0 ID=cds-WP_000093130.1;Parent=gene-C9E95_RS07110;Dbxref=GenBank:WP_000093130.1;Name=WP_000093130.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463159.1;locus_tag=C9E95_RS07110;product=arginine/agmatine antiporter;protein_id=WP_000093130.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 56502 57263 . - . ID=gene-C9E95_RS07115;Name=C9E95_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07115;old_locus_tag=C9E95_07285 NZ_PYJW01000071.1 Protein Homology CDS 56502 57263 . - 0 ID=cds-WP_001217074.1;Parent=gene-C9E95_RS07115;Dbxref=GenBank:WP_001217074.1;Name=WP_001217074.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463160.1;locus_tag=C9E95_RS07115;product=AraC family transcriptional regulator;protein_id=WP_001217074.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 57561 59828 . - . ID=gene-C9E95_RS07120;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=C9E95_RS07120;old_locus_tag=C9E95_07290 NZ_PYJW01000071.1 Protein Homology CDS 57561 59828 . - 0 ID=cds-WP_001538051.1;Parent=gene-C9E95_RS07120;Dbxref=GenBank:WP_001538051.1;Name=WP_001538051.1;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709824.2;locus_tag=C9E95_RS07120;product=arginine decarboxylase;protein_id=WP_001538051.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 60061 60993 . - . ID=gene-C9E95_RS07125;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=C9E95_RS07125;old_locus_tag=C9E95_07295 NZ_PYJW01000071.1 Protein Homology CDS 60061 60993 . - 0 ID=cds-WP_000106992.1;Parent=gene-C9E95_RS07125;Dbxref=GenBank:WP_000106992.1;Name=WP_000106992.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463162.1;locus_tag=C9E95_RS07125;product=transcriptional regulator MelR;protein_id=WP_000106992.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 61262 62617 . + . ID=gene-C9E95_RS07130;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=C9E95_RS07130;old_locus_tag=C9E95_07300 NZ_PYJW01000071.1 Protein Homology CDS 61262 62617 . + 0 ID=cds-WP_012219486.1;Parent=gene-C9E95_RS07130;Dbxref=GenBank:WP_012219486.1;Name=WP_012219486.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463163.1;locus_tag=C9E95_RS07130;product=alpha-galactosidase;protein_id=WP_012219486.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 62701 64131 . + . ID=gene-C9E95_RS07135;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=C9E95_RS07135;old_locus_tag=C9E95_07305 NZ_PYJW01000071.1 Protein Homology CDS 62701 64131 . + 0 ID=cds-WP_000028070.1;Parent=gene-C9E95_RS07135;Dbxref=GenBank:WP_000028070.1;Name=WP_000028070.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463164.1;locus_tag=C9E95_RS07135;product=melibiose:sodium transporter MelB;protein_id=WP_000028070.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 64229 65875 . - . ID=gene-C9E95_RS07140;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=C9E95_RS07140;old_locus_tag=C9E95_07310 NZ_PYJW01000071.1 Protein Homology CDS 64229 65875 . - 0 ID=cds-WP_000037190.1;Parent=gene-C9E95_RS07140;Dbxref=GenBank:WP_000037190.1;Name=WP_000037190.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463165.1;locus_tag=C9E95_RS07140;product=class I fumarate hydratase FumA;protein_id=WP_000037190.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 65971 67311 . - . ID=gene-C9E95_RS07145;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=C9E95_RS07145;old_locus_tag=C9E95_07315 NZ_PYJW01000071.1 Protein Homology CDS 65971 67311 . - 0 ID=cds-WP_000899149.1;Parent=gene-C9E95_RS07145;Dbxref=GenBank:WP_000899149.1;Name=WP_000899149.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463166.1;locus_tag=C9E95_RS07145;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_000899149.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 67458 67724 . - . ID=gene-C9E95_RS07150;Name=C9E95_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07150;old_locus_tag=C9E95_07320 NZ_PYJW01000071.1 Protein Homology CDS 67458 67724 . - 0 ID=cds-WP_024156601.1;Parent=gene-C9E95_RS07150;Dbxref=GenBank:WP_024156601.1;Name=WP_024156601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463167.1;locus_tag=C9E95_RS07150;product=hypothetical protein;protein_id=WP_024156601.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 68041 68760 . - . ID=gene-C9E95_RS07155;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=C9E95_RS07155;old_locus_tag=C9E95_07325 NZ_PYJW01000071.1 Protein Homology CDS 68041 68760 . - 0 ID=cds-WP_000611307.1;Parent=gene-C9E95_RS07155;Dbxref=GenBank:WP_000611307.1;Name=WP_000611307.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463168.1;locus_tag=C9E95_RS07155;product=two-component system response regulator DcuR;protein_id=WP_000611307.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 68757 70388 . - . ID=gene-C9E95_RS07160;Name=C9E95_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07160;old_locus_tag=C9E95_07330 NZ_PYJW01000071.1 Protein Homology CDS 68757 70388 . - 0 ID=cds-WP_000682894.1;Parent=gene-C9E95_RS07160;Dbxref=GenBank:WP_000682894.1;Name=WP_000682894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463169.1;locus_tag=C9E95_RS07160;product=sensor histidine kinase;protein_id=WP_000682894.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 70744 73173 . + . ID=gene-C9E95_RS07165;Name=C9E95_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07165;old_locus_tag=C9E95_07335 NZ_PYJW01000071.1 Protein Homology CDS 70744 73173 . + 0 ID=cds-WP_023993533.1;Parent=gene-C9E95_RS07165;Dbxref=GenBank:WP_023993533.1;Name=WP_023993533.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403483.1;locus_tag=C9E95_RS07165;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_023993533.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 73187 73813 . + . ID=gene-C9E95_RS07170;Name=C9E95_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07170;old_locus_tag=C9E95_07340 NZ_PYJW01000071.1 Protein Homology CDS 73187 73813 . + 0 ID=cds-WP_000816143.1;Parent=gene-C9E95_RS07170;Dbxref=GenBank:WP_000816143.1;Name=WP_000816143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463171.1;locus_tag=C9E95_RS07170;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_000816143.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 73806 74579 . + . ID=gene-C9E95_RS07175;Name=C9E95_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07175;old_locus_tag=C9E95_07345 NZ_PYJW01000071.1 Protein Homology CDS 73806 74579 . + 0 ID=cds-WP_000544929.1;Parent=gene-C9E95_RS07175;Dbxref=GenBank:WP_000544929.1;Name=WP_000544929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463172.1;locus_tag=C9E95_RS07175;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000544929.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 74654 75247 . + . ID=gene-C9E95_RS07180;Name=C9E95_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07180;old_locus_tag=C9E95_07350 NZ_PYJW01000071.1 Protein Homology CDS 74654 75247 . + 0 ID=cds-WP_023993532.1;Parent=gene-C9E95_RS07180;Dbxref=GenBank:WP_023993532.1;Name=WP_023993532.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001629474.1;locus_tag=C9E95_RS07180;product=TorD/DmsD family molecular chaperone;protein_id=WP_023993532.1;transl_table=11 NZ_PYJW01000071.1 RefSeq pseudogene 75331 76731 . - . ID=gene-C9E95_RS07185;Name=C9E95_RS07185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS07185;old_locus_tag=C9E95_07355;pseudo=true NZ_PYJW01000071.1 Protein Homology CDS 75331 76731 . - 0 ID=cds-C9E95_RS07185;Parent=gene-C9E95_RS07185;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463174.1;locus_tag=C9E95_RS07185;product=DUF7594 domain-containing protein;pseudo=true;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 77035 77940 . + . ID=gene-C9E95_RS07190;Name=C9E95_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07190;old_locus_tag=C9E95_07360 NZ_PYJW01000071.1 Protein Homology CDS 77035 77940 . + 0 ID=cds-WP_001268198.1;Parent=gene-C9E95_RS07190;Dbxref=GenBank:WP_001268198.1;Name=WP_001268198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463175.1;locus_tag=C9E95_RS07190;product=SdiA-regulated domain-containing protein;protein_id=WP_001268198.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 78235 78504 . - . ID=gene-C9E95_RS07195;Name=C9E95_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07195;old_locus_tag=C9E95_07365 NZ_PYJW01000071.1 Protein Homology CDS 78235 78504 . - 0 ID=cds-WP_077677837.1;Parent=gene-C9E95_RS07195;Dbxref=GenBank:WP_077677837.1;Name=WP_077677837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=C9E95_RS07195;product=hypothetical protein;protein_id=WP_077677837.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 78512 78697 . - . ID=gene-C9E95_RS07200;Name=C9E95_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07200;old_locus_tag=C9E95_07370 NZ_PYJW01000071.1 Protein Homology CDS 78512 78697 . - 0 ID=cds-WP_223151133.1;Parent=gene-C9E95_RS07200;Dbxref=GenBank:WP_223151133.1;Name=WP_223151133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463178.1;locus_tag=C9E95_RS07200;product=hypothetical protein;protein_id=WP_223151133.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 78609 78917 . + . ID=gene-C9E95_RS07205;Name=C9E95_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07205;old_locus_tag=C9E95_07375 NZ_PYJW01000071.1 Protein Homology CDS 78609 78917 . + 0 ID=cds-WP_072100833.1;Parent=gene-C9E95_RS07205;Dbxref=GenBank:WP_072100833.1;Name=WP_072100833.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576549.1;locus_tag=C9E95_RS07205;product=ATP-binding cassette domain-containing protein;protein_id=WP_072100833.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 78910 79197 . - . ID=gene-C9E95_RS07210;Name=rtsB;gbkey=Gene;gene=rtsB;gene_biotype=protein_coding;locus_tag=C9E95_RS07210;old_locus_tag=C9E95_07380 NZ_PYJW01000071.1 Protein Homology CDS 78910 79197 . - 0 ID=cds-WP_001269916.1;Parent=gene-C9E95_RS07210;Dbxref=GenBank:WP_001269916.1;Name=WP_001269916.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rtsB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463179.3;locus_tag=C9E95_RS07210;product=transcriptional regulator RtsB;protein_id=WP_001269916.1;transl_table=11 NZ_PYJW01000071.1 RefSeq gene 79194 80069 . - . ID=gene-C9E95_RS07215;Name=C9E95_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07215;old_locus_tag=C9E95_07385 NZ_PYJW01000071.1 Protein Homology CDS 79194 80069 . - 0 ID=cds-WP_000921674.1;Parent=gene-C9E95_RS07215;Dbxref=GenBank:WP_000921674.1;Name=WP_000921674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463180.1;locus_tag=C9E95_RS07215;product=AraC family transcriptional regulator;protein_id=WP_000921674.1;transl_table=11 ##sequence-region NZ_PYJW01000122.1 1 4918 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000122.1 RefSeq region 1 4918 . + . ID=NZ_PYJW01000122.1:1..4918;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000122.1 RefSeq gene 18 1286 . + . ID=gene-C9E95_RS13185;Name=C9E95_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13185;old_locus_tag=C9E95_13520 NZ_PYJW01000122.1 Protein Homology CDS 18 1286 . + 0 ID=cds-WP_023993978.1;Parent=gene-C9E95_RS13185;Dbxref=GenBank:WP_023993978.1;Name=WP_023993978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462266.1;locus_tag=C9E95_RS13185;product=SLC13 family permease;protein_id=WP_023993978.1;transl_table=11 NZ_PYJW01000122.1 RefSeq gene 1319 2218 . + . ID=gene-C9E95_RS13190;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=C9E95_RS13190;old_locus_tag=C9E95_13525 NZ_PYJW01000122.1 Protein Homology CDS 1319 2218 . + 0 ID=cds-WP_000045349.1;Parent=gene-C9E95_RS13190;Dbxref=GenBank:WP_000045349.1;Name=WP_000045349.1;Ontology_term=GO:0008730;gbkey=CDS;gene=ttdA;go_function=L(+)-tartrate dehydratase activity|0008730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462265.1;locus_tag=C9E95_RS13190;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_000045349.1;transl_table=11 NZ_PYJW01000122.1 RefSeq gene 2218 2835 . + . ID=gene-C9E95_RS13195;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=C9E95_RS13195;old_locus_tag=C9E95_13530 NZ_PYJW01000122.1 Protein Homology CDS 2218 2835 . + 0 ID=cds-WP_000162405.1;Parent=gene-C9E95_RS13195;Dbxref=GenBank:WP_000162405.1;Name=WP_000162405.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462264.1;locus_tag=C9E95_RS13195;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_000162405.1;transl_table=11 NZ_PYJW01000122.1 RefSeq gene 2992 3237 . + . ID=gene-C9E95_RS13200;Name=C9E95_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13200;old_locus_tag=C9E95_13535 NZ_PYJW01000122.1 Protein Homology CDS 2992 3237 . + 0 ID=cds-WP_000180124.1;Parent=gene-C9E95_RS13200;Dbxref=GenBank:WP_000180124.1;Name=WP_000180124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000180124.1;locus_tag=C9E95_RS13200;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_000180124.1;transl_table=11 NZ_PYJW01000122.1 RefSeq gene 3253 4918 . + . ID=gene-C9E95_RS13205;Name=oadA;end_range=4918,.;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=C9E95_RS13205;old_locus_tag=C9E95_13540;partial=true NZ_PYJW01000122.1 Protein Homology CDS 3253 4918 . + 0 ID=cds-WP_135369850.1;Parent=gene-C9E95_RS13205;Dbxref=GenBank:WP_135369850.1;Name=WP_135369850.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;end_range=4918,.;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9E95_RS13205;partial=true;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_135369850.1;transl_table=11 ##sequence-region NZ_PYJW01000106.1 1 4709 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000106.1 RefSeq region 1 4709 . + . ID=NZ_PYJW01000106.1:1..4709;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000106.1 RefSeq gene 55 558 . + . ID=gene-C9E95_RS11350;Name=C9E95_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11350;old_locus_tag=C9E95_11645 NZ_PYJW01000106.1 Protein Homology CDS 55 558 . + 0 ID=cds-WP_001519079.1;Parent=gene-C9E95_RS11350;Dbxref=GenBank:WP_001519079.1;Name=WP_001519079.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463333.1;locus_tag=C9E95_RS11350;product=GNAT family N-acetyltransferase;protein_id=WP_001519079.1;transl_table=11 NZ_PYJW01000106.1 RefSeq gene 665 1153 . + . ID=gene-C9E95_RS11355;Name=C9E95_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11355;old_locus_tag=C9E95_11650 NZ_PYJW01000106.1 Protein Homology CDS 665 1153 . + 0 ID=cds-WP_058108081.1;Parent=gene-C9E95_RS11355;Dbxref=GenBank:WP_058108081.1;Name=WP_058108081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463332.1;locus_tag=C9E95_RS11355;product=DUF3617 domain-containing protein;protein_id=WP_058108081.1;transl_table=11 NZ_PYJW01000106.1 RefSeq pseudogene 1388 2199 . - . ID=gene-C9E95_RS11360;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=pseudogene;locus_tag=C9E95_RS11360;old_locus_tag=C9E95_11655;pseudo=true NZ_PYJW01000106.1 Protein Homology CDS 1388 2199 . - 0 ID=cds-C9E95_RS11360;Parent=gene-C9E95_RS11360;Note=frameshifted;Ontology_term=GO:0006400,GO:0004497,GO:0045301,GO:0046872;gbkey=CDS;gene=miaE;go_function=monooxygenase activity|0004497||IEA,tRNA 2-(methylsulfanyl)-N(6)-isopentenyladenosine(37) hydroxylase activity|0045301||IEA,metal ion binding|0046872||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463331.1;locus_tag=C9E95_RS11360;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;pseudo=true;transl_table=11 NZ_PYJW01000106.1 RefSeq gene 2211 2627 . - . ID=gene-C9E95_RS11365;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=C9E95_RS11365;old_locus_tag=C9E95_11660 NZ_PYJW01000106.1 Protein Homology CDS 2211 2627 . - 0 ID=cds-WP_000002940.1;Parent=gene-C9E95_RS11365;Dbxref=GenBank:WP_000002940.1;Name=WP_000002940.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463330.1;locus_tag=C9E95_RS11365;product=ribonuclease E inhibitor RraB;protein_id=WP_000002940.1;transl_table=11 NZ_PYJW01000106.1 RefSeq gene 2728 2823 . + . ID=gene-C9E95_RS23740;Name=argL;gbkey=Gene;gene=argL;gene_biotype=protein_coding;locus_tag=C9E95_RS23740 NZ_PYJW01000106.1 Protein Homology CDS 2728 2823 . + 0 ID=cds-WP_375371746.1;Parent=gene-C9E95_RS23740;Dbxref=GenBank:WP_375371746.1;Name=WP_375371746.1;gbkey=CDS;gene=argL;inference=COORDINATES: protein motif:HMM:NF047283.2;locus_tag=C9E95_RS23740;product=putative translational regulatory protein ArgL;protein_id=WP_375371746.1;transl_table=11 NZ_PYJW01000106.1 RefSeq gene 2793 3797 . + . ID=gene-C9E95_RS11370;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=C9E95_RS11370;old_locus_tag=C9E95_11665 NZ_PYJW01000106.1 Protein Homology CDS 2793 3797 . + 0 ID=cds-WP_000103041.1;Parent=gene-C9E95_RS11370;Dbxref=GenBank:WP_000103041.1;Name=WP_000103041.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463329.1;locus_tag=C9E95_RS11370;product=ornithine carbamoyltransferase;protein_id=WP_000103041.1;transl_table=11 NZ_PYJW01000106.1 RefSeq gene 3871 4323 . - . ID=gene-C9E95_RS11375;Name=C9E95_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11375;old_locus_tag=C9E95_11670 NZ_PYJW01000106.1 Protein Homology CDS 3871 4323 . - 0 ID=cds-WP_023194706.1;Parent=gene-C9E95_RS11375;Dbxref=GenBank:WP_023194706.1;Name=WP_023194706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463328.1;locus_tag=C9E95_RS11375;product=YhcH/YjgK/YiaL family protein;protein_id=WP_023194706.1;transl_table=11 ##sequence-region NZ_PYJW01000064.1 1 4658 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000064.1 RefSeq region 1 4658 . + . ID=NZ_PYJW01000064.1:1..4658;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000064.1 RefSeq gene 1 214 . - . ID=gene-C9E95_RS06480;Name=C9E95_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06480;old_locus_tag=C9E95_06635;partial=true;start_range=.,1 NZ_PYJW01000064.1 Protein Homology CDS 1 214 . - 0 ID=cds-WP_000031662.1;Parent=gene-C9E95_RS06480;Dbxref=GenBank:WP_000031662.1;Name=WP_000031662.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=C9E95_RS06480;partial=true;product=GTP-binding protein;protein_id=WP_000031662.1;start_range=.,1;transl_table=11 NZ_PYJW01000064.1 RefSeq gene 330 405 . - . ID=gene-C9E95_RS06485;Name=C9E95_RS06485;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS06485;old_locus_tag=C9E95_06640 NZ_PYJW01000064.1 tRNAscan-SE tRNA 330 405 . - . ID=rna-C9E95_RS06485;Parent=gene-C9E95_RS06485;anticodon=(pos:complement(370..372));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS06485;product=tRNA-Thr NZ_PYJW01000064.1 tRNAscan-SE exon 330 405 . - . ID=exon-C9E95_RS06485-1;Parent=rna-C9E95_RS06485;anticodon=(pos:complement(370..372));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS06485;product=tRNA-Thr NZ_PYJW01000064.1 RefSeq gene 412 486 . - . ID=gene-C9E95_RS06490;Name=C9E95_RS06490;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS06490;old_locus_tag=C9E95_06645 NZ_PYJW01000064.1 tRNAscan-SE tRNA 412 486 . - . ID=rna-C9E95_RS06490;Parent=gene-C9E95_RS06490;anticodon=(pos:complement(451..453));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS06490;product=tRNA-Gly NZ_PYJW01000064.1 tRNAscan-SE exon 412 486 . - . ID=exon-C9E95_RS06490-1;Parent=rna-C9E95_RS06490;anticodon=(pos:complement(451..453));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS06490;product=tRNA-Gly NZ_PYJW01000064.1 RefSeq gene 603 687 . - . ID=gene-C9E95_RS06495;Name=C9E95_RS06495;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS06495;old_locus_tag=C9E95_06650 NZ_PYJW01000064.1 tRNAscan-SE tRNA 603 687 . - . ID=rna-C9E95_RS06495;Parent=gene-C9E95_RS06495;anticodon=(pos:complement(651..653));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS06495;product=tRNA-Tyr NZ_PYJW01000064.1 tRNAscan-SE exon 603 687 . - . ID=exon-C9E95_RS06495-1;Parent=rna-C9E95_RS06495;anticodon=(pos:complement(651..653));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS06495;product=tRNA-Tyr NZ_PYJW01000064.1 RefSeq gene 696 771 . - . ID=gene-C9E95_RS06500;Name=C9E95_RS06500;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS06500;old_locus_tag=C9E95_06655 NZ_PYJW01000064.1 tRNAscan-SE tRNA 696 771 . - . ID=rna-C9E95_RS06500;Parent=gene-C9E95_RS06500;anticodon=(pos:complement(736..738));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS06500;product=tRNA-Thr NZ_PYJW01000064.1 tRNAscan-SE exon 696 771 . - . ID=exon-C9E95_RS06500-1;Parent=rna-C9E95_RS06500;anticodon=(pos:complement(736..738));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS06500;product=tRNA-Thr NZ_PYJW01000064.1 RefSeq gene 791 964 . + . ID=gene-C9E95_RS06505;Name=C9E95_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06505;old_locus_tag=C9E95_06660 NZ_PYJW01000064.1 Protein Homology CDS 791 964 . + 0 ID=cds-WP_001621476.1;Parent=gene-C9E95_RS06505;Dbxref=GenBank:WP_001621476.1;Name=WP_001621476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463014.1;locus_tag=C9E95_RS06505;product=hypothetical protein;protein_id=WP_001621476.1;transl_table=11 NZ_PYJW01000064.1 RefSeq gene 1173 2123 . + . ID=gene-C9E95_RS06510;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=C9E95_RS06510;old_locus_tag=C9E95_06670 NZ_PYJW01000064.1 Protein Homology CDS 1173 2123 . + 0 ID=cds-WP_000023069.1;Parent=gene-C9E95_RS06510;Dbxref=GenBank:WP_000023069.1;Name=WP_000023069.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=C9E95_RS06510;product=type I pantothenate kinase;protein_id=WP_000023069.1;transl_table=11 NZ_PYJW01000064.1 RefSeq gene 2158 3120 . - . ID=gene-C9E95_RS06515;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=C9E95_RS06515;old_locus_tag=C9E95_06675 NZ_PYJW01000064.1 Protein Homology CDS 2158 3120 . - 0 ID=cds-WP_000655746.1;Parent=gene-C9E95_RS06515;Dbxref=GenBank:WP_000655746.1;Name=WP_000655746.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463012.1;locus_tag=C9E95_RS06515;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_000655746.1;transl_table=11 NZ_PYJW01000064.1 RefSeq gene 3117 4145 . - . ID=gene-C9E95_RS06520;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=C9E95_RS06520;old_locus_tag=C9E95_06680 NZ_PYJW01000064.1 Protein Homology CDS 3117 4145 . - 0 ID=cds-WP_000149795.1;Parent=gene-C9E95_RS06520;Dbxref=GenBank:WP_000149795.1;Name=WP_000149795.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463011.1;locus_tag=C9E95_RS06520;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_000149795.1;transl_table=11 NZ_PYJW01000064.1 RefSeq gene 4327 4442 . - . ID=gene-C9E95_RS06530;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9E95_RS06530;old_locus_tag=C9E95_06685 NZ_PYJW01000064.1 cmsearch rRNA 4327 4442 . - . ID=rna-C9E95_RS06530;Parent=gene-C9E95_RS06530;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS06530;product=5S ribosomal RNA NZ_PYJW01000064.1 cmsearch exon 4327 4442 . - . ID=exon-C9E95_RS06530-1;Parent=rna-C9E95_RS06530;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS06530;product=5S ribosomal RNA ##sequence-region NZ_PYJW01000050.1 1 4068 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000050.1 RefSeq region 1 4068 . + . ID=NZ_PYJW01000050.1:1..4068;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000050.1 RefSeq gene 450 1220 . + . ID=gene-C9E95_RS04080;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=C9E95_RS04080;old_locus_tag=C9E95_04185 NZ_PYJW01000050.1 Protein Homology CDS 450 1220 . + 0 ID=cds-WP_001057715.1;Parent=gene-C9E95_RS04080;Dbxref=GenBank:WP_001057715.1;Name=WP_001057715.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462162.1;locus_tag=C9E95_RS04080;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_001057715.1;transl_table=11 NZ_PYJW01000050.1 RefSeq gene 1246 2136 . + . ID=gene-C9E95_RS04085;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=C9E95_RS04085;old_locus_tag=C9E95_04190 NZ_PYJW01000050.1 Protein Homology CDS 1246 2136 . + 0 ID=cds-WP_000178106.1;Parent=gene-C9E95_RS04085;Dbxref=GenBank:WP_000178106.1;Name=WP_000178106.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=C9E95_RS04085;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000178106.1;transl_table=11 NZ_PYJW01000050.1 RefSeq gene 2234 3379 . + . ID=gene-C9E95_RS04090;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=C9E95_RS04090;old_locus_tag=C9E95_04195 NZ_PYJW01000050.1 Protein Homology CDS 2234 3379 . + 0 ID=cds-WP_000706464.1;Parent=gene-C9E95_RS04090;Dbxref=GenBank:WP_000706464.1;Name=WP_000706464.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462160.1;locus_tag=C9E95_RS04090;product=glycerate 2-kinase;protein_id=WP_000706464.1;transl_table=11 NZ_PYJW01000050.1 RefSeq gene 3412 3786 . + . ID=gene-C9E95_RS04095;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=C9E95_RS04095;old_locus_tag=C9E95_04200 NZ_PYJW01000050.1 cmsearch RNase_P_RNA 3412 3786 . + . ID=rna-C9E95_RS04095;Parent=gene-C9E95_RS04095;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS04095;product=RNase P RNA component class A NZ_PYJW01000050.1 cmsearch exon 3412 3786 . + . ID=exon-C9E95_RS04095-1;Parent=rna-C9E95_RS04095;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS04095;product=RNase P RNA component class A NZ_PYJW01000050.1 RefSeq gene 3781 4068 . - . ID=gene-C9E95_RS04100;Name=C9E95_RS04100;end_range=4068,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04100;old_locus_tag=C9E95_04205;partial=true NZ_PYJW01000050.1 GeneMarkS-2+ CDS 3781 4068 . - 0 ID=cds-WP_210115729.1;Parent=gene-C9E95_RS04100;Dbxref=GenBank:WP_210115729.1;Name=WP_210115729.1;end_range=4068,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS04100;partial=true;product=hypothetical protein;protein_id=WP_210115729.1;transl_table=11 ##sequence-region NZ_PYJW01000089.1 1 4030 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000089.1 RefSeq region 1 4030 . + . ID=NZ_PYJW01000089.1:1..4030;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000089.1 RefSeq gene 786 1031 . + . ID=gene-C9E95_RS09835;Name=C9E95_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09835;old_locus_tag=C9E95_10090 NZ_PYJW01000089.1 Protein Homology CDS 786 1031 . + 0 ID=cds-WP_023193134.1;Parent=gene-C9E95_RS09835;Dbxref=GenBank:WP_023193134.1;Name=WP_023193134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543206.1;locus_tag=C9E95_RS09835;product=hypothetical protein;protein_id=WP_023193134.1;transl_table=11 NZ_PYJW01000089.1 RefSeq pseudogene 1122 1450 . + . ID=gene-C9E95_RS09840;Name=C9E95_RS09840;end_range=1450,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS09840;old_locus_tag=C9E95_10095;partial=true;pseudo=true;start_range=.,1122 NZ_PYJW01000089.1 Protein Homology CDS 1122 1450 . + 0 ID=cds-C9E95_RS09840;Parent=gene-C9E95_RS09840;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1450,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=C9E95_RS09840;partial=true;product=transposase;pseudo=true;start_range=.,1122;transl_table=11 NZ_PYJW01000089.1 RefSeq pseudogene 1431 1672 . + . ID=gene-C9E95_RS09845;Name=C9E95_RS09845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS09845;old_locus_tag=C9E95_10100;partial=true;pseudo=true;start_range=.,1431 NZ_PYJW01000089.1 Protein Homology CDS 1431 1672 . + 0 ID=cds-C9E95_RS09845;Parent=gene-C9E95_RS09845;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015995291.1;locus_tag=C9E95_RS09845;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,1431;transl_table=11 NZ_PYJW01000089.1 RefSeq gene 1688 1764 . - . ID=gene-C9E95_RS09850;Name=C9E95_RS09850;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS09850;old_locus_tag=C9E95_10105 NZ_PYJW01000089.1 tRNAscan-SE tRNA 1688 1764 . - . ID=rna-C9E95_RS09850;Parent=gene-C9E95_RS09850;anticodon=(pos:complement(1728..1730));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS09850;product=tRNA-Arg NZ_PYJW01000089.1 tRNAscan-SE exon 1688 1764 . - . ID=exon-C9E95_RS09850-1;Parent=rna-C9E95_RS09850;anticodon=(pos:complement(1728..1730));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS09850;product=tRNA-Arg NZ_PYJW01000089.1 RefSeq gene 2019 2615 . + . ID=gene-C9E95_RS09860;Name=fimW;gbkey=Gene;gene=fimW;gene_biotype=protein_coding;locus_tag=C9E95_RS09860;old_locus_tag=C9E95_10115 NZ_PYJW01000089.1 Protein Homology CDS 2019 2615 . + 0 ID=cds-WP_000948629.1;Parent=gene-C9E95_RS09860;Dbxref=GenBank:WP_000948629.1;Name=WP_000948629.1;gbkey=CDS;gene=fimW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459547.1;locus_tag=C9E95_RS09860;product=fimbria biosynthesis transcriptional regulator FimW;protein_id=WP_000948629.1;transl_table=11 NZ_PYJW01000089.1 RefSeq gene 2777 3088 . + . ID=gene-C9E95_RS09865;Name=C9E95_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09865;old_locus_tag=C9E95_10120 NZ_PYJW01000089.1 Protein Homology CDS 2777 3088 . + 0 ID=cds-WP_023203049.1;Parent=gene-C9E95_RS09865;Dbxref=GenBank:WP_023203049.1;Name=WP_023203049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459546.1;locus_tag=C9E95_RS09865;product=hypothetical protein;protein_id=WP_023203049.1;transl_table=11 NZ_PYJW01000089.1 RefSeq gene 3107 3829 . + . ID=gene-C9E95_RS09870;Name=fimY;gbkey=Gene;gene=fimY;gene_biotype=protein_coding;locus_tag=C9E95_RS09870;old_locus_tag=C9E95_10125 NZ_PYJW01000089.1 Protein Homology CDS 3107 3829 . + 0 ID=cds-WP_023993876.1;Parent=gene-C9E95_RS09870;Dbxref=GenBank:WP_023993876.1;Name=WP_023993876.1;gbkey=CDS;gene=fimY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459545.1;locus_tag=C9E95_RS09870;product=fimbria biosynthesis regulator FimY;protein_id=WP_023993876.1;transl_table=11 ##sequence-region NZ_PYJW01000172.1 1 3809 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000172.1 RefSeq region 1 3809 . + . ID=NZ_PYJW01000172.1:1..3809;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000172.1 RefSeq gene 216 731 . - . ID=gene-C9E95_RS20370;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=C9E95_RS20370;old_locus_tag=C9E95_20865 NZ_PYJW01000172.1 Protein Homology CDS 216 731 . - 0 ID=cds-WP_001130193.1;Parent=gene-C9E95_RS20370;Dbxref=GenBank:WP_001130193.1;Name=WP_001130193.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=C9E95_RS20370;product=S-ribosylhomocysteine lyase;protein_id=WP_001130193.1;transl_table=11 NZ_PYJW01000172.1 RefSeq gene 881 2437 . - . ID=gene-C9E95_RS20375;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=C9E95_RS20375;old_locus_tag=C9E95_20870 NZ_PYJW01000172.1 Protein Homology CDS 881 2437 . - 0 ID=cds-WP_000611821.1;Parent=gene-C9E95_RS20375;Dbxref=GenBank:WP_000611821.1;Name=WP_000611821.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461744.1;locus_tag=C9E95_RS20375;product=glutamate--cysteine ligase;protein_id=WP_000611821.1;transl_table=11 NZ_PYJW01000172.1 RefSeq gene 2514 2939 . - . ID=gene-C9E95_RS20380;Name=C9E95_RS20380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20380;old_locus_tag=C9E95_20875 NZ_PYJW01000172.1 Protein Homology CDS 2514 2939 . - 0 ID=cds-WP_001279499.1;Parent=gene-C9E95_RS20380;Dbxref=GenBank:WP_001279499.1;Name=WP_001279499.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461745.1;locus_tag=C9E95_RS20380;product=YqaA family protein;protein_id=WP_001279499.1;transl_table=11 NZ_PYJW01000172.1 RefSeq gene 2936 3502 . - . ID=gene-C9E95_RS20385;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=C9E95_RS20385;old_locus_tag=C9E95_20880 NZ_PYJW01000172.1 Protein Homology CDS 2936 3502 . - 0 ID=cds-WP_000271296.1;Parent=gene-C9E95_RS20385;Dbxref=GenBank:WP_000271296.1;Name=WP_000271296.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461746.1;locus_tag=C9E95_RS20385;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_000271296.1;transl_table=11 NZ_PYJW01000172.1 RefSeq gene 3732 3808 . - . ID=gene-C9E95_RS20390;Name=C9E95_RS20390;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS20390;old_locus_tag=C9E95_20885 NZ_PYJW01000172.1 tRNAscan-SE tRNA 3732 3808 . - . ID=rna-C9E95_RS20390;Parent=gene-C9E95_RS20390;anticodon=(pos:complement(3772..3774));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS20390;product=tRNA-Arg NZ_PYJW01000172.1 tRNAscan-SE exon 3732 3808 . - . ID=exon-C9E95_RS20390-1;Parent=rna-C9E95_RS20390;anticodon=(pos:complement(3772..3774));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS20390;product=tRNA-Arg ##sequence-region NZ_PYJW01000153.1 1 3743 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000153.1 RefSeq region 1 3743 . + . ID=NZ_PYJW01000153.1:1..3743;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000153.1 RefSeq pseudogene 1 149 . + . ID=gene-C9E95_RS23315;Name=C9E95_RS23315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23315;partial=true;pseudo=true;start_range=.,1 NZ_PYJW01000153.1 Protein Homology CDS 1 149 . + 2 ID=cds-C9E95_RS23315;Parent=gene-C9E95_RS23315;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460024.1;locus_tag=C9E95_RS23315;partial=true;product=phage tail protein;pseudo=true;start_range=.,1;transl_table=11 NZ_PYJW01000153.1 RefSeq gene 149 724 . + . ID=gene-C9E95_RS18075;Name=C9E95_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18075;old_locus_tag=C9E95_18520 NZ_PYJW01000153.1 Protein Homology CDS 149 724 . + 0 ID=cds-WP_076735573.1;Parent=gene-C9E95_RS18075;Dbxref=GenBank:WP_076735573.1;Name=WP_076735573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000143180.1;locus_tag=C9E95_RS18075;product=tail fiber assembly protein;protein_id=WP_076735573.1;transl_table=11 NZ_PYJW01000153.1 RefSeq gene 969 1709 . - . ID=gene-C9E95_RS18080;Name=C9E95_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18080;old_locus_tag=C9E95_18525 NZ_PYJW01000153.1 Protein Homology CDS 969 1709 . - 0 ID=cds-WP_223202802.1;Parent=gene-C9E95_RS18080;Dbxref=GenBank:WP_223202802.1;Name=WP_223202802.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003029120.1;locus_tag=C9E95_RS18080;product=GIY-YIG nuclease family protein;protein_id=WP_223202802.1;transl_table=11 NZ_PYJW01000153.1 RefSeq gene 1880 3022 . - . ID=gene-C9E95_RS18085;Name=C9E95_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18085;old_locus_tag=C9E95_18530 NZ_PYJW01000153.1 Protein Homology CDS 1880 3022 . - 0 ID=cds-WP_135369871.1;Parent=gene-C9E95_RS18085;Dbxref=GenBank:WP_135369871.1;Name=WP_135369871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227815.1;locus_tag=C9E95_RS18085;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=WP_135369871.1;transl_table=11 ##sequence-region NZ_PYJW01000068.1 1 3630 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000068.1 RefSeq region 1 3630 . + . ID=NZ_PYJW01000068.1:1..3630;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000068.1 RefSeq gene 77 991 . + . ID=gene-C9E95_RS06630;Name=C9E95_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06630;old_locus_tag=C9E95_06785 NZ_PYJW01000068.1 Protein Homology CDS 77 991 . + 0 ID=cds-WP_001233445.1;Parent=gene-C9E95_RS06630;Dbxref=GenBank:WP_001233445.1;Name=WP_001233445.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460818.1;locus_tag=C9E95_RS06630;product=DMT family transporter;protein_id=WP_001233445.1;transl_table=11 NZ_PYJW01000068.1 RefSeq gene 1124 1282 . + . ID=gene-C9E95_RS06635;Name=C9E95_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06635;old_locus_tag=C9E95_06790 NZ_PYJW01000068.1 Protein Homology CDS 1124 1282 . + 0 ID=cds-WP_000480735.1;Parent=gene-C9E95_RS06635;Dbxref=GenBank:WP_000480735.1;Name=WP_000480735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460819.1;locus_tag=C9E95_RS06635;product=DUF5993 family protein;protein_id=WP_000480735.1;transl_table=11 NZ_PYJW01000068.1 RefSeq gene 1292 1906 . + . ID=gene-C9E95_RS06640;Name=C9E95_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06640;old_locus_tag=C9E95_06795 NZ_PYJW01000068.1 Protein Homology CDS 1292 1906 . + 0 ID=cds-WP_080204073.1;Parent=gene-C9E95_RS06640;Dbxref=GenBank:WP_080204073.1;Name=WP_080204073.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460820.1;locus_tag=C9E95_RS06640;product=disulfide bond formation protein B;protein_id=WP_080204073.1;transl_table=11 NZ_PYJW01000068.1 RefSeq pseudogene 2233 2379 . - . ID=gene-C9E95_RS23710;Name=C9E95_RS23710;end_range=2379,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23710;partial=true;pseudo=true NZ_PYJW01000068.1 Protein Homology CDS 2233 2379 . - 0 ID=cds-C9E95_RS23710;Parent=gene-C9E95_RS23710;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0003700;end_range=2379,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219268.1;locus_tag=C9E95_RS23710;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_PYJW01000068.1 RefSeq gene 2394 2540 . + . ID=gene-C9E95_RS23715;Name=C9E95_RS23715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23715 NZ_PYJW01000068.1 GeneMarkS-2+ CDS 2394 2540 . + 0 ID=cds-WP_001520350.1;Parent=gene-C9E95_RS23715;Dbxref=GenBank:WP_001520350.1;Name=WP_001520350.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS23715;product=hypothetical protein;protein_id=WP_001520350.1;transl_table=11 NZ_PYJW01000068.1 RefSeq gene 3054 3179 . - . ID=gene-C9E95_RS06655;Name=C9E95_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06655;old_locus_tag=C9E95_06810 NZ_PYJW01000068.1 Protein Homology CDS 3054 3179 . - 0 ID=cds-WP_000457876.1;Parent=gene-C9E95_RS06655;Dbxref=GenBank:WP_000457876.1;Name=WP_000457876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457876.1;locus_tag=C9E95_RS06655;product=hypothetical protein;protein_id=WP_000457876.1;transl_table=11 NZ_PYJW01000068.1 RefSeq pseudogene 3170 3371 . + . ID=gene-C9E95_RS23435;Name=C9E95_RS23435;end_range=3371,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23435;partial=true;pseudo=true;start_range=.,3170 NZ_PYJW01000068.1 Protein Homology CDS 3170 3371 . + 0 ID=cds-C9E95_RS23435;Parent=gene-C9E95_RS23435;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3371,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=C9E95_RS23435;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,3170;transl_table=11 ##sequence-region NZ_PYJW01000012.1 1 377 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000012.1 RefSeq region 1 377 . + . ID=NZ_PYJW01000012.1:1..377;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000012.1 RefSeq gene 90 164 . + . ID=gene-C9E95_RS00720;Name=C9E95_RS00720;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS00720;old_locus_tag=C9E95_00730 NZ_PYJW01000012.1 tRNAscan-SE tRNA 90 164 . + . ID=rna-C9E95_RS00720;Parent=gene-C9E95_RS00720;anticodon=(pos:122..124);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS00720;product=tRNA-Gln NZ_PYJW01000012.1 tRNAscan-SE exon 90 164 . + . ID=exon-C9E95_RS00720-1;Parent=rna-C9E95_RS00720;anticodon=(pos:122..124);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS00720;product=tRNA-Gln NZ_PYJW01000012.1 RefSeq gene 180 256 . + . ID=gene-C9E95_RS00725;Name=C9E95_RS00725;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS00725;old_locus_tag=C9E95_00735 NZ_PYJW01000012.1 tRNAscan-SE tRNA 180 256 . + . ID=rna-C9E95_RS00725;Parent=gene-C9E95_RS00725;anticodon=(pos:214..216);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS00725;product=tRNA-Met NZ_PYJW01000012.1 tRNAscan-SE exon 180 256 . + . ID=exon-C9E95_RS00725-1;Parent=rna-C9E95_RS00725;anticodon=(pos:214..216);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS00725;product=tRNA-Met NZ_PYJW01000012.1 RefSeq gene 303 377 . + . ID=gene-C9E95_RS00730;Name=C9E95_RS00730;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS00730;old_locus_tag=C9E95_00740 NZ_PYJW01000012.1 tRNAscan-SE tRNA 303 377 . + . ID=rna-C9E95_RS00730;Parent=gene-C9E95_RS00730;anticodon=(pos:335..337);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS00730;product=tRNA-Gln NZ_PYJW01000012.1 tRNAscan-SE exon 303 377 . + . ID=exon-C9E95_RS00730-1;Parent=rna-C9E95_RS00730;anticodon=(pos:335..337);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS00730;product=tRNA-Gln ##sequence-region NZ_PYJW01000121.1 1 3618 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000121.1 RefSeq region 1 3618 . + . ID=NZ_PYJW01000121.1:1..3618;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000121.1 RefSeq pseudogene 1 146 . + . ID=gene-C9E95_RS13160;Name=C9E95_RS13160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS13160;old_locus_tag=C9E95_13495;partial=true;pseudo=true;start_range=.,1 NZ_PYJW01000121.1 Protein Homology CDS 1 146 . + 2 ID=cds-C9E95_RS13160;Parent=gene-C9E95_RS13160;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539222.1;locus_tag=C9E95_RS13160;partial=true;product=glycosyltransferase;pseudo=true;start_range=.,1;transl_table=11 NZ_PYJW01000121.1 RefSeq gene 136 1590 . + . ID=gene-C9E95_RS13165;Name=C9E95_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13165;old_locus_tag=C9E95_13500 NZ_PYJW01000121.1 Protein Homology CDS 136 1590 . + 0 ID=cds-WP_001537448.1;Parent=gene-C9E95_RS13165;Dbxref=GenBank:WP_001537448.1;Name=WP_001537448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537448.1;locus_tag=C9E95_RS13165;product=hypothetical protein;protein_id=WP_001537448.1;transl_table=11 NZ_PYJW01000121.1 RefSeq gene 1634 1762 . - . ID=gene-C9E95_RS23765;Name=C9E95_RS23765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23765 NZ_PYJW01000121.1 GeneMarkS-2+ CDS 1634 1762 . - 0 ID=cds-WP_001539384.1;Parent=gene-C9E95_RS23765;Dbxref=GenBank:WP_001539384.1;Name=WP_001539384.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS23765;product=hypothetical protein;protein_id=WP_001539384.1;transl_table=11 NZ_PYJW01000121.1 RefSeq pseudogene 1819 2488 . - . ID=gene-C9E95_RS23770;Name=C9E95_RS23770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23770;partial=true;pseudo=true;start_range=.,1819 NZ_PYJW01000121.1 Protein Homology CDS 1819 2488 . - 0 ID=cds-C9E95_RS23770;Parent=gene-C9E95_RS23770;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF013068.6;locus_tag=C9E95_RS23770;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,1819;transl_table=11 NZ_PYJW01000121.1 RefSeq gene 2457 2600 . - . ID=gene-C9E95_RS23775;Name=C9E95_RS23775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23775 NZ_PYJW01000121.1 Protein Homology CDS 2457 2600 . - 0 ID=cds-WP_275656952.1;Parent=gene-C9E95_RS23775;Dbxref=GenBank:WP_275656952.1;Name=WP_275656952.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013068.6;locus_tag=C9E95_RS23775;product=hypothetical protein;protein_id=WP_275656952.1;transl_table=11 NZ_PYJW01000121.1 RefSeq gene 2597 2830 . - . ID=gene-C9E95_RS23780;Name=C9E95_RS23780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23780 NZ_PYJW01000121.1 GeneMarkS-2+ CDS 2597 2830 . - 0 ID=cds-WP_001662199.1;Parent=gene-C9E95_RS23780;Dbxref=GenBank:WP_001662199.1;Name=WP_001662199.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS23780;product=hypothetical protein;protein_id=WP_001662199.1;transl_table=11 NZ_PYJW01000121.1 RefSeq pseudogene 2918 3618 . - . ID=gene-C9E95_RS13180;Name=C9E95_RS13180;end_range=3618,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS13180;old_locus_tag=C9E95_13515;partial=true;pseudo=true NZ_PYJW01000121.1 Protein Homology CDS 2918 3618 . - 2 ID=cds-C9E95_RS13180;Parent=gene-C9E95_RS13180;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3618,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000969800.1;locus_tag=C9E95_RS13180;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_PYJW01000033.1 1 3454 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000033.1 RefSeq region 1 3454 . + . ID=NZ_PYJW01000033.1:1..3454;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000033.1 RefSeq pseudogene 1 643 . - . ID=gene-C9E95_RS02255;Name=C9E95_RS02255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS02255;old_locus_tag=C9E95_02300;partial=true;pseudo=true;start_range=.,1 NZ_PYJW01000033.1 Protein Homology CDS 1 643 . - 0 ID=cds-C9E95_RS02255;Parent=gene-C9E95_RS02255;Note=catalyzes the formation of pyruvate from oxaloacetate%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9E95_RS02255;partial=true;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;pseudo=true;start_range=.,1;transl_table=11 NZ_PYJW01000033.1 RefSeq gene 659 907 . - . ID=gene-C9E95_RS02260;Name=C9E95_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02260;old_locus_tag=C9E95_02305 NZ_PYJW01000033.1 Protein Homology CDS 659 907 . - 0 ID=cds-WP_001089087.1;Parent=gene-C9E95_RS02260;Dbxref=GenBank:WP_001089087.1;Name=WP_001089087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459746.1;locus_tag=C9E95_RS02260;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_001089087.1;transl_table=11 NZ_PYJW01000033.1 RefSeq gene 957 2225 . - . ID=gene-C9E95_RS02265;Name=C9E95_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02265;old_locus_tag=C9E95_02310 NZ_PYJW01000033.1 Protein Homology CDS 957 2225 . - 0 ID=cds-WP_023993907.1;Parent=gene-C9E95_RS02265;Dbxref=GenBank:WP_023993907.1;Name=WP_023993907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074132.1;locus_tag=C9E95_RS02265;product=SLC13 family permease;protein_id=WP_023993907.1;transl_table=11 NZ_PYJW01000033.1 RefSeq gene 2448 3431 . + . ID=gene-C9E95_RS02270;Name=C9E95_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02270;old_locus_tag=C9E95_02315 NZ_PYJW01000033.1 Protein Homology CDS 2448 3431 . + 0 ID=cds-WP_000282119.1;Parent=gene-C9E95_RS02270;Dbxref=GenBank:WP_000282119.1;Name=WP_000282119.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459744.1;locus_tag=C9E95_RS02270;product=LysR family transcriptional regulator;protein_id=WP_000282119.1;transl_table=11 ##sequence-region NZ_PYJW01000054.1 1 76860 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000054.1 RefSeq region 1 76860 . + . ID=NZ_PYJW01000054.1:1..76860;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000054.1 RefSeq gene 29 568 . + . ID=gene-C9E95_RS04180;Name=stiA;gbkey=Gene;gene=stiA;gene_biotype=protein_coding;locus_tag=C9E95_RS04180;old_locus_tag=C9E95_04290 NZ_PYJW01000054.1 Protein Homology CDS 29 568 . + 0 ID=cds-WP_023204291.1;Parent=gene-C9E95_RS04180;Dbxref=GenBank:WP_023204291.1;Name=WP_023204291.1;gbkey=CDS;gene=stiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459182.1;locus_tag=C9E95_RS04180;product=Sti fimbria major subunit StiA;protein_id=WP_023204291.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 616 1299 . + . ID=gene-C9E95_RS04185;Name=stiB;gbkey=Gene;gene=stiB;gene_biotype=protein_coding;locus_tag=C9E95_RS04185;old_locus_tag=C9E95_04295 NZ_PYJW01000054.1 Protein Homology CDS 616 1299 . + 0 ID=cds-WP_001086414.1;Parent=gene-C9E95_RS04185;Dbxref=GenBank:WP_001086414.1;Name=WP_001086414.1;gbkey=CDS;gene=stiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459181.1;locus_tag=C9E95_RS04185;product=fimbrial biogenesis chaperone StiB;protein_id=WP_001086414.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 1326 3872 . + . ID=gene-C9E95_RS04190;Name=C9E95_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04190;old_locus_tag=C9E95_04300 NZ_PYJW01000054.1 Protein Homology CDS 1326 3872 . + 0 ID=cds-WP_023993179.1;Parent=gene-C9E95_RS04190;Dbxref=GenBank:WP_023993179.1;Name=WP_023993179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459180.1;locus_tag=C9E95_RS04190;product=fimbrial outer membrane usher protein;protein_id=WP_023993179.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 3881 4960 . + . ID=gene-C9E95_RS04195;Name=C9E95_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04195;old_locus_tag=C9E95_04305 NZ_PYJW01000054.1 Protein Homology CDS 3881 4960 . + 0 ID=cds-WP_023993180.1;Parent=gene-C9E95_RS04195;Dbxref=GenBank:WP_023993180.1;Name=WP_023993180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459179.1;locus_tag=C9E95_RS04195;product=fimbrial protein;protein_id=WP_023993180.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 5080 5850 . - . ID=gene-C9E95_RS04200;Name=C9E95_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04200;old_locus_tag=C9E95_04310 NZ_PYJW01000054.1 Protein Homology CDS 5080 5850 . - 0 ID=cds-WP_000983418.1;Parent=gene-C9E95_RS04200;Dbxref=GenBank:WP_000983418.1;Name=WP_000983418.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=C9E95_RS04200;product=ABC transporter permease;protein_id=WP_000983418.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 5847 6773 . - . ID=gene-C9E95_RS04205;Name=C9E95_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04205;old_locus_tag=C9E95_04315 NZ_PYJW01000054.1 Protein Homology CDS 5847 6773 . - 0 ID=cds-WP_000150619.1;Parent=gene-C9E95_RS04205;Dbxref=GenBank:WP_000150619.1;Name=WP_000150619.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459177.1;locus_tag=C9E95_RS04205;product=ABC transporter ATP-binding protein;protein_id=WP_000150619.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 6882 7544 . + . ID=gene-C9E95_RS04210;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=C9E95_RS04210;old_locus_tag=C9E95_04320 NZ_PYJW01000054.1 Protein Homology CDS 6882 7544 . + 0 ID=cds-WP_000651591.1;Parent=gene-C9E95_RS04210;Dbxref=GenBank:WP_000651591.1;Name=WP_000651591.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459176.1;locus_tag=C9E95_RS04210;product=carbonate dehydratase;protein_id=WP_000651591.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 7602 8138 . - . ID=gene-C9E95_RS04215;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=C9E95_RS04215;old_locus_tag=C9E95_04325 NZ_PYJW01000054.1 Protein Homology CDS 7602 8138 . - 0 ID=cds-WP_000683342.1;Parent=gene-C9E95_RS04215;Dbxref=GenBank:WP_000683342.1;Name=WP_000683342.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=C9E95_RS04215;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683342.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 8344 10734 . + . ID=gene-C9E95_RS04220;Name=C9E95_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04220;old_locus_tag=C9E95_04330 NZ_PYJW01000054.1 Protein Homology CDS 8344 10734 . + 0 ID=cds-WP_023993181.1;Parent=gene-C9E95_RS04220;Dbxref=GenBank:WP_023993181.1;Name=WP_023993181.1;Ontology_term=GO:0016614,GO:0048038,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459174.1;locus_tag=C9E95_RS04220;product=glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase;protein_id=WP_023993181.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 10819 12429 . - . ID=gene-C9E95_RS04225;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=C9E95_RS04225;old_locus_tag=C9E95_04335 NZ_PYJW01000054.1 Protein Homology CDS 10819 12429 . - 0 ID=cds-WP_000946047.1;Parent=gene-C9E95_RS04225;Dbxref=GenBank:WP_000946047.1;Name=WP_000946047.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459173.1;locus_tag=C9E95_RS04225;product=multicopper oxidase CueO;protein_id=WP_000946047.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 12631 12978 . + . ID=gene-C9E95_RS04230;Name=C9E95_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04230;old_locus_tag=C9E95_04340 NZ_PYJW01000054.1 Protein Homology CDS 12631 12978 . + 0 ID=cds-WP_000846613.1;Parent=gene-C9E95_RS04230;Dbxref=GenBank:WP_000846613.1;Name=WP_000846613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459172.1;locus_tag=C9E95_RS04230;product=YacC family pilotin-like protein;protein_id=WP_000846613.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 13085 13945 . + . ID=gene-C9E95_RS04235;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=C9E95_RS04235;old_locus_tag=C9E95_04345 NZ_PYJW01000054.1 Protein Homology CDS 13085 13945 . + 0 ID=cds-WP_000829968.1;Parent=gene-C9E95_RS04235;Dbxref=GenBank:WP_000829968.1;Name=WP_000829968.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459171.1;locus_tag=C9E95_RS04235;product=polyamine aminopropyltransferase;protein_id=WP_000829968.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 13966 14760 . + . ID=gene-C9E95_RS04240;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=C9E95_RS04240;old_locus_tag=C9E95_04350 NZ_PYJW01000054.1 Protein Homology CDS 13966 14760 . + 0 ID=cds-WP_080203750.1;Parent=gene-C9E95_RS04240;Dbxref=GenBank:WP_080203750.1;Name=WP_080203750.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459170.1;locus_tag=C9E95_RS04240;product=adenosylmethionine decarboxylase;protein_id=WP_080203750.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 14790 15557 . - . ID=gene-C9E95_RS04245;Name=C9E95_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04245;old_locus_tag=C9E95_04355 NZ_PYJW01000054.1 Protein Homology CDS 14790 15557 . - 0 ID=cds-WP_000678254.1;Parent=gene-C9E95_RS04245;Dbxref=GenBank:WP_000678254.1;Name=WP_000678254.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459169.1;locus_tag=C9E95_RS04245;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000678254.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 15567 16550 . - . ID=gene-C9E95_RS04250;Name=C9E95_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04250;old_locus_tag=C9E95_04360 NZ_PYJW01000054.1 Protein Homology CDS 15567 16550 . - 0 ID=cds-WP_080203751.1;Parent=gene-C9E95_RS04250;Dbxref=GenBank:WP_080203751.1;Name=WP_080203751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459168.1;locus_tag=C9E95_RS04250;product=D-threonate 4-phosphate dehydrogenase;protein_id=WP_080203751.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 16540 17811 . - . ID=gene-C9E95_RS04255;Name=dtnK;gbkey=Gene;gene=dtnK;gene_biotype=protein_coding;locus_tag=C9E95_RS04255;old_locus_tag=C9E95_04365 NZ_PYJW01000054.1 Protein Homology CDS 16540 17811 . - 0 ID=cds-WP_000782195.1;Parent=gene-C9E95_RS04255;Dbxref=GenBank:WP_000782195.1;Name=WP_000782195.1;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;gene=dtnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459167.1;locus_tag=C9E95_RS04255;product=D-threonate kinase;protein_id=WP_000782195.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 17808 18761 . - . ID=gene-C9E95_RS04260;Name=C9E95_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04260;old_locus_tag=C9E95_04370 NZ_PYJW01000054.1 Protein Homology CDS 17808 18761 . - 0 ID=cds-WP_001022089.1;Parent=gene-C9E95_RS04260;Dbxref=GenBank:WP_001022089.1;Name=WP_001022089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459166.1;locus_tag=C9E95_RS04260;product=2-keto-3-deoxygluconate permease 1;protein_id=WP_001022089.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 18996 19358 . - . ID=gene-C9E95_RS04265;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=C9E95_RS04265;old_locus_tag=C9E95_04375 NZ_PYJW01000054.1 Protein Homology CDS 18996 19358 . - 0 ID=cds-WP_000384308.1;Parent=gene-C9E95_RS04265;Dbxref=GenBank:WP_000384308.1;Name=WP_000384308.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459165.1;locus_tag=C9E95_RS04265;product=protein YacL;protein_id=WP_000384308.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 19629 19952 . + . ID=gene-C9E95_RS04270;Name=C9E95_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04270;old_locus_tag=C9E95_04380 NZ_PYJW01000054.1 Protein Homology CDS 19629 19952 . + 0 ID=cds-WP_001101535.1;Parent=gene-C9E95_RS04270;Dbxref=GenBank:WP_001101535.1;Name=WP_001101535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101536.1;locus_tag=C9E95_RS04270;product=low molecular weight protein tyrosine phosphatase family protein;protein_id=WP_001101535.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 20370 20834 . + . ID=gene-C9E95_RS04275;Name=C9E95_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04275;old_locus_tag=C9E95_04385 NZ_PYJW01000054.1 Protein Homology CDS 20370 20834 . + 0 ID=cds-WP_080203752.1;Parent=gene-C9E95_RS04275;Dbxref=GenBank:WP_080203752.1;Name=WP_080203752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110434.1;locus_tag=C9E95_RS04275;product=hypothetical protein;protein_id=WP_080203752.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 20874 23471 . - . ID=gene-C9E95_RS04280;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=C9E95_RS04280;old_locus_tag=C9E95_04390 NZ_PYJW01000054.1 Protein Homology CDS 20874 23471 . - 0 ID=cds-WP_023234440.1;Parent=gene-C9E95_RS04280;Dbxref=GenBank:WP_023234440.1;Name=WP_023234440.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080489.1;locus_tag=C9E95_RS04280;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_023234440.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 23860 25482 . + . ID=gene-C9E95_RS04285;Name=C9E95_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04285;old_locus_tag=C9E95_04400 NZ_PYJW01000054.1 Protein Homology CDS 23860 25482 . + 0 ID=cds-WP_023993183.1;Parent=gene-C9E95_RS04285;Dbxref=GenBank:WP_023993183.1;Name=WP_023993183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459162.2;locus_tag=C9E95_RS04285;product=DUF3300 domain-containing protein;protein_id=WP_023993183.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 25495 26286 . + . ID=gene-C9E95_RS04290;Name=C9E95_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04290;old_locus_tag=C9E95_04405 NZ_PYJW01000054.1 Protein Homology CDS 25495 26286 . + 0 ID=cds-WP_000757452.1;Parent=gene-C9E95_RS04290;Dbxref=GenBank:WP_000757452.1;Name=WP_000757452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459161.1;locus_tag=C9E95_RS04290;product=DUF2950 family protein;protein_id=WP_000757452.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 26324 26608 . - . ID=gene-C9E95_RS04295;Name=C9E95_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04295;old_locus_tag=C9E95_04410 NZ_PYJW01000054.1 Protein Homology CDS 26324 26608 . - 0 ID=cds-WP_000765363.1;Parent=gene-C9E95_RS04295;Dbxref=GenBank:WP_000765363.1;Name=WP_000765363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459160.1;locus_tag=C9E95_RS04295;product=outer membrane protein;protein_id=WP_000765363.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 26897 28321 . - . ID=gene-C9E95_RS04300;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=C9E95_RS04300;old_locus_tag=C9E95_04415 NZ_PYJW01000054.1 Protein Homology CDS 26897 28321 . - 0 ID=cds-WP_001519338.1;Parent=gene-C9E95_RS04300;Dbxref=GenBank:WP_001519338.1;Name=WP_001519338.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=C9E95_RS04300;product=dihydrolipoyl dehydrogenase;protein_id=WP_001519338.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 28522 30408 . - . ID=gene-C9E95_RS04305;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=C9E95_RS04305;old_locus_tag=C9E95_04420 NZ_PYJW01000054.1 Protein Homology CDS 28522 30408 . - 0 ID=cds-WP_023244800.1;Parent=gene-C9E95_RS04305;Dbxref=GenBank:WP_023244800.1;Name=WP_023244800.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459158.2;locus_tag=C9E95_RS04305;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_023244800.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 30423 33086 . - . ID=gene-C9E95_RS04310;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=C9E95_RS04310;old_locus_tag=C9E95_04425 NZ_PYJW01000054.1 Protein Homology CDS 30423 33086 . - 0 ID=cds-WP_080219599.1;Parent=gene-C9E95_RS04310;Dbxref=GenBank:WP_080219599.1;Name=WP_080219599.1;Ontology_term=GO:0006086,GO:0004738,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=C9E95_RS04310;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_080219599.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 33246 34010 . - . ID=gene-C9E95_RS04315;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=C9E95_RS04315;old_locus_tag=C9E95_04430 NZ_PYJW01000054.1 Protein Homology CDS 33246 34010 . - 0 ID=cds-WP_000331771.1;Parent=gene-C9E95_RS04315;Dbxref=GenBank:WP_000331771.1;Name=WP_000331771.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459156.1;locus_tag=C9E95_RS04315;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_000331771.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 34573 35946 . + . ID=gene-C9E95_RS04320;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=C9E95_RS04320;old_locus_tag=C9E95_04435 NZ_PYJW01000054.1 Protein Homology CDS 34573 35946 . + 0 ID=cds-WP_000969487.1;Parent=gene-C9E95_RS04320;Dbxref=GenBank:WP_000969487.1;Name=WP_000969487.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459155.1;locus_tag=C9E95_RS04320;product=aromatic amino acid transporter AroP;protein_id=WP_000969487.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 36110 37516 . + . ID=gene-C9E95_RS04325;Name=C9E95_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04325;old_locus_tag=C9E95_04440 NZ_PYJW01000054.1 Protein Homology CDS 36110 37516 . + 0 ID=cds-WP_000357530.1;Parent=gene-C9E95_RS04325;Dbxref=GenBank:WP_000357530.1;Name=WP_000357530.1;Ontology_term=GO:0006812,GO:0008643,GO:0015486,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glycoside-pentoside-hexuronide:cation symporter activity|0015486||IEA;go_process=monoatomic cation transport|0006812||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459154.1;locus_tag=C9E95_RS04325;product=glycoside-pentoside-hexuronide (GPH):cation symporter;protein_id=WP_000357530.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 37516 38466 . + . ID=gene-C9E95_RS04330;Name=C9E95_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04330;old_locus_tag=C9E95_04445 NZ_PYJW01000054.1 Protein Homology CDS 37516 38466 . + 0 ID=cds-WP_001622553.1;Parent=gene-C9E95_RS04330;Dbxref=GenBank:WP_001622553.1;Name=WP_001622553.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459153.1;locus_tag=C9E95_RS04330;product=glycoside hydrolase family 43 protein;protein_id=WP_001622553.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 38558 39412 . - . ID=gene-C9E95_RS04335;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=C9E95_RS04335;old_locus_tag=C9E95_04450 NZ_PYJW01000054.1 Protein Homology CDS 38558 39412 . - 0 ID=cds-WP_000172039.1;Parent=gene-C9E95_RS04335;Dbxref=GenBank:WP_000172039.1;Name=WP_000172039.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459152.1;locus_tag=C9E95_RS04335;product=beta-lactamase regulator AmpE;protein_id=WP_000172039.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 39409 39972 . - . ID=gene-C9E95_RS04340;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=C9E95_RS04340;old_locus_tag=C9E95_04455 NZ_PYJW01000054.1 Protein Homology CDS 39409 39972 . - 0 ID=cds-WP_000936326.1;Parent=gene-C9E95_RS04340;Dbxref=GenBank:WP_000936326.1;Name=WP_000936326.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459151.1;locus_tag=C9E95_RS04340;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000936326.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 40060 40953 . + . ID=gene-C9E95_RS04345;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=C9E95_RS04345;old_locus_tag=C9E95_04460 NZ_PYJW01000054.1 Protein Homology CDS 40060 40953 . + 0 ID=cds-WP_001135135.1;Parent=gene-C9E95_RS04345;Dbxref=GenBank:WP_001135135.1;Name=WP_001135135.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459150.1;locus_tag=C9E95_RS04345;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_001135135.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 41175 41612 . + . ID=gene-C9E95_RS04355;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=C9E95_RS04355;old_locus_tag=C9E95_04470 NZ_PYJW01000054.1 Protein Homology CDS 41175 41612 . + 0 ID=cds-WP_000414989.1;Parent=gene-C9E95_RS04355;Dbxref=GenBank:WP_000414989.1;Name=WP_000414989.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459149.1;locus_tag=C9E95_RS04355;product=prepilin peptidase-dependent pilin;protein_id=WP_000414989.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 41622 43007 . + . ID=gene-C9E95_RS04360;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=C9E95_RS04360;old_locus_tag=C9E95_04475 NZ_PYJW01000054.1 Protein Homology CDS 41622 43007 . + 0 ID=cds-WP_080203754.1;Parent=gene-C9E95_RS04360;Dbxref=GenBank:WP_080203754.1;Name=WP_080203754.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459148.1;locus_tag=C9E95_RS04360;product=type II secretion system protein GspE;protein_id=WP_080203754.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 42997 44199 . + . ID=gene-C9E95_RS04365;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=C9E95_RS04365;old_locus_tag=C9E95_04480 NZ_PYJW01000054.1 Protein Homology CDS 42997 44199 . + 0 ID=cds-WP_080203755.1;Parent=gene-C9E95_RS04365;Dbxref=GenBank:WP_080203755.1;Name=WP_080203755.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459147.1;locus_tag=C9E95_RS04365;product=protein transport protein HofC;protein_id=WP_080203755.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 44230 45273 . - . ID=gene-C9E95_RS04370;Name=C9E95_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04370;old_locus_tag=C9E95_04485 NZ_PYJW01000054.1 Protein Homology CDS 44230 45273 . - 0 ID=cds-WP_001217365.1;Parent=gene-C9E95_RS04370;Dbxref=GenBank:WP_001217365.1;Name=WP_001217365.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=C9E95_RS04370;product=GMP reductase;protein_id=WP_001217365.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 45499 46119 . + . ID=gene-C9E95_RS04375;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=C9E95_RS04375;old_locus_tag=C9E95_04490 NZ_PYJW01000054.1 Protein Homology CDS 45499 46119 . + 0 ID=cds-WP_080203756.1;Parent=gene-C9E95_RS04375;Dbxref=GenBank:WP_080203756.1;Name=WP_080203756.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459145.1;locus_tag=C9E95_RS04375;product=dephospho-CoA kinase;protein_id=WP_080203756.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 46119 46862 . + . ID=gene-C9E95_RS04380;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=C9E95_RS04380;old_locus_tag=C9E95_04495 NZ_PYJW01000054.1 Protein Homology CDS 46119 46862 . + 0 ID=cds-WP_000557441.1;Parent=gene-C9E95_RS04380;Dbxref=GenBank:WP_000557441.1;Name=WP_000557441.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459144.1;locus_tag=C9E95_RS04380;product=cell division protein ZapD;protein_id=WP_000557441.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 46872 47063 . + . ID=gene-C9E95_RS04385;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=C9E95_RS04385;old_locus_tag=C9E95_04500 NZ_PYJW01000054.1 Protein Homology CDS 46872 47063 . + 0 ID=cds-WP_001286419.1;Parent=gene-C9E95_RS04385;Dbxref=GenBank:WP_001286419.1;Name=WP_001286419.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459143.1;locus_tag=C9E95_RS04385;product=DNA gyrase inhibitor YacG;protein_id=WP_001286419.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 47060 48001 . - . ID=gene-C9E95_RS04390;Name=C9E95_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04390;old_locus_tag=C9E95_04505 NZ_PYJW01000054.1 Protein Homology CDS 47060 48001 . - 0 ID=cds-WP_045341765.1;Parent=gene-C9E95_RS04390;Dbxref=GenBank:WP_045341765.1;Name=WP_045341765.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697068.1;locus_tag=C9E95_RS04390;product=LysR family transcriptional regulator;protein_id=WP_045341765.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 48087 49076 . + . ID=gene-C9E95_RS04395;Name=C9E95_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04395;old_locus_tag=C9E95_04510 NZ_PYJW01000054.1 Protein Homology CDS 48087 49076 . + 0 ID=cds-WP_001200034.1;Parent=gene-C9E95_RS04395;Dbxref=GenBank:WP_001200034.1;Name=WP_001200034.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200034.1;locus_tag=C9E95_RS04395;product=aldo/keto reductase;protein_id=WP_001200034.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 49110 49505 . - . ID=gene-C9E95_RS04400;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=C9E95_RS04400;old_locus_tag=C9E95_04515 NZ_PYJW01000054.1 Protein Homology CDS 49110 49505 . - 0 ID=cds-WP_080203757.1;Parent=gene-C9E95_RS04400;Dbxref=GenBank:WP_080203757.1;Name=WP_080203757.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000736059.1;locus_tag=C9E95_RS04400;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_080203757.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 49657 52362 . - . ID=gene-C9E95_RS04405;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=C9E95_RS04405;old_locus_tag=C9E95_04520 NZ_PYJW01000054.1 Protein Homology CDS 49657 52362 . - 0 ID=cds-WP_000905756.1;Parent=gene-C9E95_RS04405;Dbxref=GenBank:WP_000905756.1;Name=WP_000905756.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459141.1;locus_tag=C9E95_RS04405;product=preprotein translocase subunit SecA;protein_id=WP_000905756.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 52424 52921 . - . ID=gene-C9E95_RS04410;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=C9E95_RS04410;old_locus_tag=C9E95_04525 NZ_PYJW01000054.1 Protein Homology CDS 52424 52921 . - 0 ID=cds-WP_000014336.1;Parent=gene-C9E95_RS04410;Dbxref=GenBank:WP_000014336.1;Name=WP_000014336.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308128.2;locus_tag=C9E95_RS04410;product=secA translation cis-regulator SecM;protein_id=WP_000014336.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 53199 54116 . - . ID=gene-C9E95_RS04415;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=C9E95_RS04415;old_locus_tag=C9E95_04530 NZ_PYJW01000054.1 Protein Homology CDS 53199 54116 . - 0 ID=cds-WP_000595487.1;Parent=gene-C9E95_RS04415;Dbxref=GenBank:WP_000595487.1;Name=WP_000595487.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459139.1;locus_tag=C9E95_RS04415;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_000595487.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 54217 55368 . - . ID=gene-C9E95_RS04420;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=C9E95_RS04420;old_locus_tag=C9E95_04535 NZ_PYJW01000054.1 Protein Homology CDS 54217 55368 . - 0 ID=cds-WP_000462785.1;Parent=gene-C9E95_RS04420;Dbxref=GenBank:WP_000462785.1;Name=WP_000462785.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=C9E95_RS04420;product=cell division protein FtsZ;protein_id=WP_000462785.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 55429 56691 . - . ID=gene-C9E95_RS04425;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=C9E95_RS04425;old_locus_tag=C9E95_04540 NZ_PYJW01000054.1 Protein Homology CDS 55429 56691 . - 0 ID=cds-WP_000588463.1;Parent=gene-C9E95_RS04425;Dbxref=GenBank:WP_000588463.1;Name=WP_000588463.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459137.1;locus_tag=C9E95_RS04425;product=cell division protein FtsA;protein_id=WP_000588463.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 56688 57518 . - . ID=gene-C9E95_RS04430;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=C9E95_RS04430;old_locus_tag=C9E95_04545 NZ_PYJW01000054.1 Protein Homology CDS 56688 57518 . - 0 ID=cds-WP_000075728.1;Parent=gene-C9E95_RS04430;Dbxref=GenBank:WP_000075728.1;Name=WP_000075728.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459136.1;locus_tag=C9E95_RS04430;product=cell division protein FtsQ;protein_id=WP_000075728.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 57520 58440 . - . ID=gene-C9E95_RS04435;Name=C9E95_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04435;old_locus_tag=C9E95_04550 NZ_PYJW01000054.1 Protein Homology CDS 57520 58440 . - 0 ID=cds-WP_000763894.1;Parent=gene-C9E95_RS04435;Dbxref=GenBank:WP_000763894.1;Name=WP_000763894.1;Ontology_term=GO:0009252,GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459135.1;locus_tag=C9E95_RS04435;product=D-alanine--D-alanine ligase;protein_id=WP_000763894.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 58433 59908 . - . ID=gene-C9E95_RS04440;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=C9E95_RS04440;old_locus_tag=C9E95_04555 NZ_PYJW01000054.1 Protein Homology CDS 58433 59908 . - 0 ID=cds-WP_001096072.1;Parent=gene-C9E95_RS04440;Dbxref=GenBank:WP_001096072.1;Name=WP_001096072.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459134.1;locus_tag=C9E95_RS04440;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_001096072.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 60027 61094 . - . ID=gene-C9E95_RS04445;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=C9E95_RS04445;old_locus_tag=C9E95_04560 NZ_PYJW01000054.1 Protein Homology CDS 60027 61094 . - 0 ID=cds-WP_000016613.1;Parent=gene-C9E95_RS04445;Dbxref=GenBank:WP_000016613.1;Name=WP_000016613.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=C9E95_RS04445;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_000016613.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 61091 62335 . - . ID=gene-C9E95_RS04450;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=C9E95_RS04450;old_locus_tag=C9E95_04565 NZ_PYJW01000054.1 Protein Homology CDS 61091 62335 . - 0 ID=cds-WP_001239803.1;Parent=gene-C9E95_RS04450;Dbxref=GenBank:WP_001239803.1;Name=WP_001239803.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459132.1;locus_tag=C9E95_RS04450;product=cell division protein FtsW;protein_id=WP_001239803.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 62335 63651 . - . ID=gene-C9E95_RS04455;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=C9E95_RS04455;old_locus_tag=C9E95_04570 NZ_PYJW01000054.1 Protein Homology CDS 62335 63651 . - 0 ID=cds-WP_000796445.1;Parent=gene-C9E95_RS04455;Dbxref=GenBank:WP_000796445.1;Name=WP_000796445.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=C9E95_RS04455;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_000796445.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 63654 64736 . - . ID=gene-C9E95_RS04460;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=C9E95_RS04460;old_locus_tag=C9E95_04575 NZ_PYJW01000054.1 Protein Homology CDS 63654 64736 . - 0 ID=cds-WP_000964141.1;Parent=gene-C9E95_RS04460;Dbxref=GenBank:WP_000964141.1;Name=WP_000964141.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=C9E95_RS04460;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000964141.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 64730 66088 . - . ID=gene-C9E95_RS04465;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=C9E95_RS04465;old_locus_tag=C9E95_04580 NZ_PYJW01000054.1 Protein Homology CDS 64730 66088 . - 0 ID=cds-WP_000626636.1;Parent=gene-C9E95_RS04465;Dbxref=GenBank:WP_000626636.1;Name=WP_000626636.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459129.1;locus_tag=C9E95_RS04465;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_000626636.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 66085 67572 . - . ID=gene-C9E95_RS04470;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=C9E95_RS04470;old_locus_tag=C9E95_04585 NZ_PYJW01000054.1 Protein Homology CDS 66085 67572 . - 0 ID=cds-WP_080203758.1;Parent=gene-C9E95_RS04470;Dbxref=GenBank:WP_080203758.1;Name=WP_080203758.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459128.1;locus_tag=C9E95_RS04470;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_080203758.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 67559 69325 . - . ID=gene-C9E95_RS04475;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=C9E95_RS04475;old_locus_tag=C9E95_04590 NZ_PYJW01000054.1 Protein Homology CDS 67559 69325 . - 0 ID=cds-WP_000642235.1;Parent=gene-C9E95_RS04475;Dbxref=GenBank:WP_000642235.1;Name=WP_000642235.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=C9E95_RS04475;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000642235.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 69341 69706 . - . ID=gene-C9E95_RS04480;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=C9E95_RS04480;old_locus_tag=C9E95_04595 NZ_PYJW01000054.1 Protein Homology CDS 69341 69706 . - 0 ID=cds-WP_000625651.1;Parent=gene-C9E95_RS04480;Dbxref=GenBank:WP_000625651.1;Name=WP_000625651.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=C9E95_RS04480;product=cell division protein FtsL;protein_id=WP_000625651.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 69703 70644 . - . ID=gene-C9E95_RS04485;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=C9E95_RS04485;old_locus_tag=C9E95_04600 NZ_PYJW01000054.1 Protein Homology CDS 69703 70644 . - 0 ID=cds-WP_000970444.1;Parent=gene-C9E95_RS04485;Dbxref=GenBank:WP_000970444.1;Name=WP_000970444.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=C9E95_RS04485;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000970444.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 70646 71104 . - . ID=gene-C9E95_RS04490;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=C9E95_RS04490;old_locus_tag=C9E95_04605 NZ_PYJW01000054.1 Protein Homology CDS 70646 71104 . - 0 ID=cds-WP_000488294.1;Parent=gene-C9E95_RS04490;Dbxref=GenBank:WP_000488294.1;Name=WP_000488294.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=C9E95_RS04490;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_000488294.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 71710 72714 . - . ID=gene-C9E95_RS04495;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=C9E95_RS04495;old_locus_tag=C9E95_04610 NZ_PYJW01000054.1 Protein Homology CDS 71710 72714 . - 0 ID=cds-WP_000762406.1;Parent=gene-C9E95_RS04495;Dbxref=GenBank:WP_000762406.1;Name=WP_000762406.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459123.1;locus_tag=C9E95_RS04495;product=catabolite repressor/activator;protein_id=WP_000762406.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 72998 73489 . - . ID=gene-C9E95_RS04500;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=C9E95_RS04500;old_locus_tag=C9E95_04615 NZ_PYJW01000054.1 Protein Homology CDS 72998 73489 . - 0 ID=cds-WP_001563086.1;Parent=gene-C9E95_RS04500;Dbxref=GenBank:WP_001563086.1;Name=WP_001563086.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=C9E95_RS04500;product=acetolactate synthase small subunit;protein_id=WP_001563086.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 73492 75216 . - . ID=gene-C9E95_RS04505;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=C9E95_RS04505;old_locus_tag=C9E95_04620 NZ_PYJW01000054.1 Protein Homology CDS 73492 75216 . - 0 ID=cds-WP_023252985.1;Parent=gene-C9E95_RS04505;Dbxref=GenBank:WP_023252985.1;Name=WP_023252985.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=C9E95_RS04505;product=acetolactate synthase 3 large subunit;protein_id=WP_023252985.1;transl_table=11 NZ_PYJW01000054.1 RefSeq gene 75538 76482 . - . ID=gene-C9E95_RS04510;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=C9E95_RS04510;old_locus_tag=C9E95_04625 NZ_PYJW01000054.1 Protein Homology CDS 75538 76482 . - 0 ID=cds-WP_001115420.1;Parent=gene-C9E95_RS04510;Dbxref=GenBank:WP_001115420.1;Name=WP_001115420.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459120.1;locus_tag=C9E95_RS04510;product=transcriptional regulator LeuO;protein_id=WP_001115420.1;transl_table=11 ##sequence-region NZ_PYJW01000176.1 1 3380 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000176.1 RefSeq region 1 3380 . + . ID=NZ_PYJW01000176.1:1..3380;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000176.1 RefSeq gene 184 2328 . + . ID=gene-C9E95_RS20740;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=C9E95_RS20740;old_locus_tag=C9E95_21235 NZ_PYJW01000176.1 Protein Homology CDS 184 2328 . + 0 ID=cds-WP_001218637.1;Parent=gene-C9E95_RS20740;Dbxref=GenBank:WP_001218637.1;Name=WP_001218637.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=C9E95_RS20740;product=ATP-dependent DNA helicase DinG;protein_id=WP_001218637.1;transl_table=11 NZ_PYJW01000176.1 RefSeq gene 2358 3329 . + . ID=gene-C9E95_RS20745;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=C9E95_RS20745;old_locus_tag=C9E95_21240 NZ_PYJW01000176.1 Protein Homology CDS 2358 3329 . + 0 ID=cds-WP_023994028.1;Parent=gene-C9E95_RS20745;Dbxref=GenBank:WP_023994028.1;Name=WP_023994028.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459800.1;locus_tag=C9E95_RS20745;product=DNA-binding protein YbiB;protein_id=WP_023994028.1;transl_table=11 ##sequence-region NZ_PYJW01000131.1 1 3194 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000131.1 RefSeq region 1 3194 . + . ID=NZ_PYJW01000131.1:1..3194;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000131.1 RefSeq gene 1 525 . + . ID=gene-C9E95_RS13770;Name=siiA;gbkey=Gene;gene=siiA;gene_biotype=protein_coding;locus_tag=C9E95_RS13770;old_locus_tag=C9E95_14115;partial=true;start_range=.,1 NZ_PYJW01000131.1 Protein Homology CDS 1 525 . + 0 ID=cds-WP_135369854.1;Parent=gene-C9E95_RS13770;Dbxref=GenBank:WP_135369854.1;Name=WP_135369854.1;gbkey=CDS;gene=siiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463122.1;locus_tag=C9E95_RS13770;partial=true;product=SPI-4 type I secretion system auxiliary protein SiiA;protein_id=WP_135369854.1;start_range=.,1;transl_table=11 NZ_PYJW01000131.1 RefSeq gene 522 1910 . + . ID=gene-C9E95_RS13775;Name=C9E95_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13775;old_locus_tag=C9E95_14120 NZ_PYJW01000131.1 Protein Homology CDS 522 1910 . + 0 ID=cds-WP_000875193.1;Parent=gene-C9E95_RS13775;Dbxref=GenBank:WP_000875193.1;Name=WP_000875193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463123.1;locus_tag=C9E95_RS13775;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_000875193.1;transl_table=11 NZ_PYJW01000131.1 RefSeq gene 1900 3194 . + . ID=gene-C9E95_RS13780;Name=siiC;end_range=3194,.;gbkey=Gene;gene=siiC;gene_biotype=protein_coding;locus_tag=C9E95_RS13780;old_locus_tag=C9E95_14125;partial=true NZ_PYJW01000131.1 Protein Homology CDS 1900 3194 . + 0 ID=cds-WP_135369855.1;Parent=gene-C9E95_RS13780;Dbxref=GenBank:WP_135369855.1;Name=WP_135369855.1;end_range=3194,.;gbkey=CDS;gene=siiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463124.1;locus_tag=C9E95_RS13780;partial=true;product=SPI-4 type I secretion system protein SiiC;protein_id=WP_135369855.1;transl_table=11 ##sequence-region NZ_PYJW01000184.1 1 3154 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000184.1 RefSeq region 1 3154 . + . ID=NZ_PYJW01000184.1:1..3154;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000184.1 RefSeq gene 1 181 . + . ID=gene-C9E95_RS23330;Name=C9E95_RS23330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23330;old_locus_tag=C9E95_22240;partial=true;start_range=.,1 NZ_PYJW01000184.1 Protein Homology CDS 1 181 . + 1 ID=cds-WP_210115734.1;Parent=gene-C9E95_RS23330;Dbxref=GenBank:WP_210115734.1;Name=WP_210115734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537366.1;locus_tag=C9E95_RS23330;partial=true;product=hypothetical protein;protein_id=WP_210115734.1;start_range=.,1;transl_table=11 NZ_PYJW01000184.1 RefSeq gene 246 413 . + . ID=gene-C9E95_RS21710;Name=C9E95_RS21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21710;old_locus_tag=C9E95_22245 NZ_PYJW01000184.1 Protein Homology CDS 246 413 . + 0 ID=cds-WP_000789530.1;Parent=gene-C9E95_RS21710;Dbxref=GenBank:WP_000789530.1;Name=WP_000789530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460824.1;locus_tag=C9E95_RS21710;product=lytic enzyme;protein_id=WP_000789530.1;transl_table=11 NZ_PYJW01000184.1 RefSeq gene 670 1203 . - . ID=gene-C9E95_RS21715;Name=C9E95_RS21715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21715;old_locus_tag=C9E95_22250 NZ_PYJW01000184.1 Protein Homology CDS 670 1203 . - 0 ID=cds-WP_023256014.1;Parent=gene-C9E95_RS21715;Dbxref=GenBank:WP_023256014.1;Name=WP_023256014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460825.1;locus_tag=C9E95_RS21715;product=DUF2514 domain-containing protein;protein_id=WP_023256014.1;transl_table=11 NZ_PYJW01000184.1 RefSeq pseudogene 1257 1448 . - . ID=gene-C9E95_RS21720;Name=C9E95_RS21720;end_range=1448,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS21720;old_locus_tag=C9E95_22255;partial=true;pseudo=true NZ_PYJW01000184.1 Protein Homology CDS 1257 1448 . - 0 ID=cds-C9E95_RS21720;Parent=gene-C9E95_RS21720;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1448,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459884.1;locus_tag=C9E95_RS21720;partial=true;product=glycoside hydrolase family 19 protein;pseudo=true;transl_table=11 NZ_PYJW01000184.1 RefSeq pseudogene 1437 2162 . + . ID=gene-C9E95_RS23825;Name=C9E95_RS23825;end_range=2162,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23825;old_locus_tag=C9E95_22260;partial=true;pseudo=true;start_range=.,1437 NZ_PYJW01000184.1 Protein Homology CDS 1437 2162 . + 0 ID=cds-C9E95_RS23825;Parent=gene-C9E95_RS23825;Note=The RecE (also known as exonuclease VIII) pathway is an alternative pathway for the initiation of homologous recombination in Escherichia coli. The RecE pathway is activated in recB%2C recC sbcA (suppressors of recB and recC) mutants. Activation of the RecE pathway results in the production of at least two phage proteins relevant for recombinational repair. RecE is a duplex DNA-specific exonuclease which produces 3' overhangs in duplex DNA by preferentially degrading the 5'-ending strands. Recombinational repair of E.coli chromosomal DNA involves as well other proteins: RecA%2C RecF%2C RecJ%2C RecO%2C RecR%2C and RuvC.%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2162,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023732.1;locus_tag=C9E95_RS23825;partial=true;product=exonuclease VIII;pseudo=true;start_range=.,1437;transl_table=11 NZ_PYJW01000184.1 RefSeq pseudogene 2162 3055 . + . ID=gene-C9E95_RS21730;Name=C9E95_RS21730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS21730;old_locus_tag=C9E95_22265;partial=true;pseudo=true;start_range=.,2162 NZ_PYJW01000184.1 Protein Homology CDS 2162 3055 . + 0 ID=cds-C9E95_RS21730;Parent=gene-C9E95_RS21730;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=C9E95_RS21730;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,2162;transl_table=11 ##sequence-region NZ_PYJW01000026.1 1 3044 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000026.1 RefSeq region 1 3044 . + . ID=NZ_PYJW01000026.1:1..3044;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000026.1 RefSeq gene 236 3044 . + . ID=gene-C9E95_RS01200;Name=C9E95_RS01200;end_range=3044,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01200;old_locus_tag=C9E95_01215;partial=true NZ_PYJW01000026.1 Protein Homology CDS 236 3044 . + 0 ID=cds-WP_210115727.1;Parent=gene-C9E95_RS01200;Dbxref=GenBank:WP_210115727.1;Name=WP_210115727.1;end_range=3044,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835061.1;locus_tag=C9E95_RS01200;partial=true;product=autotransporter-associated beta strand repeat-containing protein;protein_id=WP_210115727.1;transl_table=11 ##sequence-region NZ_PYJW01000151.1 1 3004 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000151.1 RefSeq region 1 3004 . + . ID=NZ_PYJW01000151.1:1..3004;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000151.1 RefSeq gene 464 1555 . + . ID=gene-C9E95_RS18065;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=C9E95_RS18065;old_locus_tag=C9E95_18510 NZ_PYJW01000151.1 Protein Homology CDS 464 1555 . + 0 ID=cds-WP_000977709.1;Parent=gene-C9E95_RS18065;Dbxref=GenBank:WP_000977709.1;Name=WP_000977709.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459974.1;locus_tag=C9E95_RS18065;product=porin OmpF;protein_id=WP_000977709.1;transl_table=11 NZ_PYJW01000151.1 RefSeq gene 1740 2930 . + . ID=gene-C9E95_RS18070;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=C9E95_RS18070;old_locus_tag=C9E95_18515 NZ_PYJW01000151.1 Protein Homology CDS 1740 2930 . + 0 ID=cds-WP_000462653.1;Parent=gene-C9E95_RS18070;Dbxref=GenBank:WP_000462653.1;Name=WP_000462653.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=C9E95_RS18070;product=aspartate transaminase;protein_id=WP_000462653.1;transl_table=11 ##sequence-region NZ_PYJW01000178.1 1 2994 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000178.1 RefSeq region 1 2994 . + . ID=NZ_PYJW01000178.1:1..2994;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000178.1 RefSeq pseudogene 111 188 . + . ID=gene-C9E95_RS23590;Name=C9E95_RS23590;end_range=188,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23590;partial=true;pseudo=true NZ_PYJW01000178.1 Protein Homology CDS 111 188 . + 0 ID=cds-C9E95_RS23590;Parent=gene-C9E95_RS23590;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=188,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226536.1;locus_tag=C9E95_RS23590;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJW01000178.1 RefSeq gene 318 2666 . - . ID=gene-C9E95_RS21155;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=C9E95_RS21155;old_locus_tag=C9E95_21655 NZ_PYJW01000178.1 Protein Homology CDS 318 2666 . - 0 ID=cds-WP_061378822.1;Parent=gene-C9E95_RS21155;Dbxref=GenBank:WP_061378822.1;Name=WP_061378822.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=C9E95_RS21155;product=SPI-1 type III secretion system effector HECT-type E3 ubiquitin transferase SopA;protein_id=WP_061378822.1;transl_table=11 ##sequence-region NZ_PYJW01000128.1 1 2814 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000128.1 RefSeq region 1 2814 . + . ID=NZ_PYJW01000128.1:1..2814;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000128.1 RefSeq gene 276 638 . + . ID=gene-C9E95_RS13650;Name=C9E95_RS13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13650;old_locus_tag=C9E95_13995 NZ_PYJW01000128.1 Protein Homology CDS 276 638 . + 0 ID=cds-WP_000472034.1;Parent=gene-C9E95_RS13650;Dbxref=GenBank:WP_000472034.1;Name=WP_000472034.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461352.1;locus_tag=C9E95_RS13650;product=MerR family transcriptional regulator;protein_id=WP_000472034.1;transl_table=11 NZ_PYJW01000128.1 RefSeq gene 640 1032 . + . ID=gene-C9E95_RS13655;Name=C9E95_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13655;old_locus_tag=C9E95_14000 NZ_PYJW01000128.1 Protein Homology CDS 640 1032 . + 0 ID=cds-WP_000826514.1;Parent=gene-C9E95_RS13655;Dbxref=GenBank:WP_000826514.1;Name=WP_000826514.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461353.1;locus_tag=C9E95_RS13655;product=MerR family transcriptional regulator;protein_id=WP_000826514.1;transl_table=11 NZ_PYJW01000128.1 RefSeq gene 1086 2501 . - . ID=gene-C9E95_RS13660;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=C9E95_RS13660;old_locus_tag=C9E95_14005 NZ_PYJW01000128.1 Protein Homology CDS 1086 2501 . - 0 ID=cds-WP_000695623.1;Parent=gene-C9E95_RS13660;Dbxref=GenBank:WP_000695623.1;Name=WP_000695623.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461354.1;locus_tag=C9E95_RS13660;product=glutamate--tRNA ligase;protein_id=WP_000695623.1;transl_table=11 ##sequence-region NZ_PYJW01000126.1 1 2546 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000126.1 RefSeq region 1 2546 . + . ID=NZ_PYJW01000126.1:1..2546;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000126.1 RefSeq gene 99 908 . - . ID=gene-C9E95_RS13430;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=protein_coding;locus_tag=C9E95_RS13430;old_locus_tag=C9E95_13770 NZ_PYJW01000126.1 Protein Homology CDS 99 908 . - 0 ID=cds-WP_000002010.1;Parent=gene-C9E95_RS13430;Dbxref=GenBank:WP_000002010.1;Name=WP_000002010.1;Ontology_term=GO:0019310,GO:0016861;gbkey=CDS;gene=iolB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463281.1;locus_tag=C9E95_RS13430;product=5-deoxy-glucuronate isomerase;protein_id=WP_000002010.1;transl_table=11 NZ_PYJW01000126.1 RefSeq gene 933 2438 . - . ID=gene-C9E95_RS13435;Name=iolA;gbkey=Gene;gene=iolA;gene_biotype=protein_coding;locus_tag=C9E95_RS13435;old_locus_tag=C9E95_13775 NZ_PYJW01000126.1 Protein Homology CDS 933 2438 . - 0 ID=cds-WP_000450729.1;Parent=gene-C9E95_RS13435;Dbxref=GenBank:WP_000450729.1;Name=WP_000450729.1;gbkey=CDS;gene=iolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463282.1;locus_tag=C9E95_RS13435;product=malonate-semialdehyde dehydrogenase IolA;protein_id=WP_000450729.1;transl_table=11 NZ_PYJW01000126.1 RefSeq pseudogene 2454 2546 . - . ID=gene-C9E95_RS23505;Name=C9E95_RS23505;end_range=2546,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23505;partial=true;pseudo=true NZ_PYJW01000126.1 Protein Homology CDS 2454 2546 . - 0 ID=cds-C9E95_RS23505;Parent=gene-C9E95_RS23505;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2546,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453693.1;locus_tag=C9E95_RS23505;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_PYJW01000041.1 1 2264 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000041.1 RefSeq region 1 2264 . + . ID=NZ_PYJW01000041.1:1..2264;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000041.1 RefSeq gene 206 454 . - . ID=gene-C9E95_RS02980;Name=C9E95_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02980;old_locus_tag=C9E95_03035 NZ_PYJW01000041.1 Protein Homology CDS 206 454 . - 0 ID=cds-WP_000208086.1;Parent=gene-C9E95_RS02980;Dbxref=GenBank:WP_000208086.1;Name=WP_000208086.1;Ontology_term=GO:0071468,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460233.1;locus_tag=C9E95_RS02980;product=biofilm/acid-resistance regulator YmgB/AriR;protein_id=WP_000208086.1;transl_table=11 NZ_PYJW01000041.1 RefSeq pseudogene 533 687 . - . ID=gene-C9E95_RS23395;Name=C9E95_RS23395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23395;pseudo=true NZ_PYJW01000041.1 Protein Homology CDS 533 687 . - 0 ID=cds-C9E95_RS23395;Parent=gene-C9E95_RS23395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460234.1;locus_tag=C9E95_RS23395;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJW01000041.1 RefSeq gene 770 1315 . + . ID=gene-C9E95_RS02985;Name=C9E95_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02985;old_locus_tag=C9E95_03040 NZ_PYJW01000041.1 Protein Homology CDS 770 1315 . + 0 ID=cds-WP_080203924.1;Parent=gene-C9E95_RS02985;Dbxref=GenBank:WP_080203924.1;Name=WP_080203924.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460235.1;locus_tag=C9E95_RS02985;product=chorismate mutase;protein_id=WP_080203924.1;transl_table=11 NZ_PYJW01000041.1 RefSeq gene 1512 2150 . + . ID=gene-C9E95_RS02990;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=C9E95_RS02990;old_locus_tag=C9E95_03045 NZ_PYJW01000041.1 Protein Homology CDS 1512 2150 . + 0 ID=cds-WP_000457190.1;Parent=gene-C9E95_RS02990;Dbxref=GenBank:WP_000457190.1;Name=WP_000457190.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460236.1;locus_tag=C9E95_RS02990;product=leucine efflux protein LeuE;protein_id=WP_000457190.1;transl_table=11 ##sequence-region NZ_PYJW01000149.1 1 1949 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000149.1 RefSeq region 1 1949 . + . ID=NZ_PYJW01000149.1:1..1949;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000149.1 RefSeq gene 1 401 . + . ID=gene-C9E95_RS18050;Name=C9E95_RS18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18050;old_locus_tag=C9E95_18495;partial=true;start_range=.,1 NZ_PYJW01000149.1 Protein Homology CDS 1 401 . + 2 ID=cds-WP_047656655.1;Parent=gene-C9E95_RS18050;Dbxref=GenBank:WP_047656655.1;Name=WP_047656655.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000415709.1;locus_tag=C9E95_RS18050;partial=true;product=glycosyltransferase;protein_id=WP_047656655.1;start_range=.,1;transl_table=11 NZ_PYJW01000149.1 RefSeq gene 398 1816 . + . ID=gene-C9E95_RS18055;Name=C9E95_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18055;old_locus_tag=C9E95_18500 NZ_PYJW01000149.1 Protein Homology CDS 398 1816 . + 0 ID=cds-WP_000632420.1;Parent=gene-C9E95_RS18055;Dbxref=GenBank:WP_000632420.1;Name=WP_000632420.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000632420.1;locus_tag=C9E95_RS18055;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_000632420.1;transl_table=11 NZ_PYJW01000149.1 RefSeq gene 1831 1949 . + . ID=gene-C9E95_RS23550;Name=C9E95_RS23550;end_range=1949,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23550;old_locus_tag=C9E95_18505;partial=true NZ_PYJW01000149.1 Protein Homology CDS 1831 1949 . + 0 ID=cds-WP_023198581.1;Parent=gene-C9E95_RS23550;Dbxref=GenBank:WP_023198581.1;Name=WP_023198581.1;end_range=1949,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=C9E95_RS23550;partial=true;product=phosphomannomutase CpsG;protein_id=WP_023198581.1;transl_table=11 ##sequence-region NZ_PYJW01000058.1 1 76157 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000058.1 RefSeq region 1 76157 . + . ID=NZ_PYJW01000058.1:1..76157;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000058.1 RefSeq gene 117 193 . - . ID=gene-C9E95_RS05385;Name=C9E95_RS05385;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS05385;old_locus_tag=C9E95_05520 NZ_PYJW01000058.1 tRNAscan-SE tRNA 117 193 . - . ID=rna-C9E95_RS05385;Parent=gene-C9E95_RS05385;anticodon=(pos:complement(157..159));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS05385;product=tRNA-Arg NZ_PYJW01000058.1 tRNAscan-SE exon 117 193 . - . ID=exon-C9E95_RS05385-1;Parent=rna-C9E95_RS05385;anticodon=(pos:complement(157..159));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS05385;product=tRNA-Arg NZ_PYJW01000058.1 RefSeq gene 197 289 . - . ID=gene-C9E95_RS05390;Name=C9E95_RS05390;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS05390;old_locus_tag=C9E95_05525 NZ_PYJW01000058.1 tRNAscan-SE tRNA 197 289 . - . ID=rna-C9E95_RS05390;Parent=gene-C9E95_RS05390;anticodon=(pos:complement(253..255));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS05390;product=tRNA-Ser NZ_PYJW01000058.1 tRNAscan-SE exon 197 289 . - . ID=exon-C9E95_RS05390-1;Parent=rna-C9E95_RS05390;anticodon=(pos:complement(253..255));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS05390;product=tRNA-Ser NZ_PYJW01000058.1 RefSeq gene 593 778 . - . ID=gene-C9E95_RS05395;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=C9E95_RS05395;old_locus_tag=C9E95_05535 NZ_PYJW01000058.1 Protein Homology CDS 593 778 . - 0 ID=cds-WP_000906486.1;Parent=gene-C9E95_RS05395;Dbxref=GenBank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=C9E95_RS05395;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 1013 3643 . - . ID=gene-C9E95_RS05400;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=C9E95_RS05400;old_locus_tag=C9E95_05540 NZ_PYJW01000058.1 Protein Homology CDS 1013 3643 . - 0 ID=cds-WP_023259045.1;Parent=gene-C9E95_RS05400;Dbxref=GenBank:WP_023259045.1;Name=WP_023259045.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461748.1;locus_tag=C9E95_RS05400;product=alanine--tRNA ligase;protein_id=WP_023259045.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 3879 4379 . - . ID=gene-C9E95_RS05410;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=C9E95_RS05410;old_locus_tag=C9E95_05550 NZ_PYJW01000058.1 Protein Homology CDS 3879 4379 . - 0 ID=cds-WP_001294861.1;Parent=gene-C9E95_RS05410;Dbxref=GenBank:WP_001294861.1;Name=WP_001294861.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461749.1;locus_tag=C9E95_RS05410;product=recombination regulator RecX;protein_id=WP_001294861.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 4496 5557 . - . ID=gene-C9E95_RS05415;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=C9E95_RS05415;old_locus_tag=C9E95_05555 NZ_PYJW01000058.1 Protein Homology CDS 4496 5557 . - 0 ID=cds-WP_000963150.1;Parent=gene-C9E95_RS05415;Dbxref=GenBank:WP_000963150.1;Name=WP_000963150.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461750.1;locus_tag=C9E95_RS05415;product=recombinase RecA;protein_id=WP_000963150.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 5642 6139 . - . ID=gene-C9E95_RS05420;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=C9E95_RS05420;old_locus_tag=C9E95_05560 NZ_PYJW01000058.1 Protein Homology CDS 5642 6139 . - 0 ID=cds-WP_001528025.1;Parent=gene-C9E95_RS05420;Dbxref=GenBank:WP_001528025.1;Name=WP_001528025.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461751.1;locus_tag=C9E95_RS05420;product=nicotinamide-nucleotide amidase;protein_id=WP_001528025.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 6335 6580 . + . ID=gene-C9E95_RS23415;Name=C9E95_RS23415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23415;old_locus_tag=C9E95_05565 NZ_PYJW01000058.1 Protein Homology CDS 6335 6580 . + 0 ID=cds-WP_001519391.1;Parent=gene-C9E95_RS23415;Dbxref=GenBank:WP_001519391.1;Name=WP_001519391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053775.1;locus_tag=C9E95_RS23415;product=hypothetical protein;protein_id=WP_001519391.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 6618 7697 . - . ID=gene-C9E95_RS05430;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=C9E95_RS05430;old_locus_tag=C9E95_05570 NZ_PYJW01000058.1 Protein Homology CDS 6618 7697 . - 0 ID=cds-WP_023206438.1;Parent=gene-C9E95_RS05430;Dbxref=GenBank:WP_023206438.1;Name=WP_023206438.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461752.1;locus_tag=C9E95_RS05430;product=lytic murein transglycosylase B;protein_id=WP_023206438.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 7951 8514 . + . ID=gene-C9E95_RS05435;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=C9E95_RS05435;old_locus_tag=C9E95_05575 NZ_PYJW01000058.1 Protein Homology CDS 7951 8514 . + 0 ID=cds-WP_000573333.1;Parent=gene-C9E95_RS05435;Dbxref=GenBank:WP_000573333.1;Name=WP_000573333.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461753.1;locus_tag=C9E95_RS05435;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000573333.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 8511 9482 . + . ID=gene-C9E95_RS05440;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=C9E95_RS05440;old_locus_tag=C9E95_05580 NZ_PYJW01000058.1 Protein Homology CDS 8511 9482 . + 0 ID=cds-WP_000199033.1;Parent=gene-C9E95_RS05440;Dbxref=GenBank:WP_000199033.1;Name=WP_000199033.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461754.1;locus_tag=C9E95_RS05440;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_000199033.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 9494 9856 . + . ID=gene-C9E95_RS05445;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=C9E95_RS05445;old_locus_tag=C9E95_05585 NZ_PYJW01000058.1 Protein Homology CDS 9494 9856 . + 0 ID=cds-WP_000111553.1;Parent=gene-C9E95_RS05445;Dbxref=GenBank:WP_000111553.1;Name=WP_000111553.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461755.1;locus_tag=C9E95_RS05445;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_000111553.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 9868 10647 . + . ID=gene-C9E95_RS05450;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=C9E95_RS05450;old_locus_tag=C9E95_05590 NZ_PYJW01000058.1 Protein Homology CDS 9868 10647 . + 0 ID=cds-WP_001077372.1;Parent=gene-C9E95_RS05450;Dbxref=GenBank:WP_001077372.1;Name=WP_001077372.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461756.1;locus_tag=C9E95_RS05450;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_001077372.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 10724 11083 . + . ID=gene-C9E95_RS05455;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=C9E95_RS05455;old_locus_tag=C9E95_05595 NZ_PYJW01000058.1 Protein Homology CDS 10724 11083 . + 0 ID=cds-WP_000255198.1;Parent=gene-C9E95_RS05455;Dbxref=GenBank:WP_000255198.1;Name=WP_000255198.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461757.1;locus_tag=C9E95_RS05455;product=transcriptional regulator GutM;protein_id=WP_000255198.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 11281 12054 . + . ID=gene-C9E95_RS05460;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=C9E95_RS05460;old_locus_tag=C9E95_05600 NZ_PYJW01000058.1 Protein Homology CDS 11281 12054 . + 0 ID=cds-WP_000804536.1;Parent=gene-C9E95_RS05460;Dbxref=GenBank:WP_000804536.1;Name=WP_000804536.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461758.1;locus_tag=C9E95_RS05460;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_000804536.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 12047 13012 . + . ID=gene-C9E95_RS05465;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=C9E95_RS05465;old_locus_tag=C9E95_05605 NZ_PYJW01000058.1 Protein Homology CDS 12047 13012 . + 0 ID=cds-WP_001278201.1;Parent=gene-C9E95_RS05465;Dbxref=GenBank:WP_001278201.1;Name=WP_001278201.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=C9E95_RS05465;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_001278201.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 13009 14529 . - . ID=gene-C9E95_RS05470;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=C9E95_RS05470;old_locus_tag=C9E95_05610 NZ_PYJW01000058.1 Protein Homology CDS 13009 14529 . - 0 ID=cds-WP_000010816.1;Parent=gene-C9E95_RS05470;Dbxref=GenBank:WP_000010816.1;Name=WP_000010816.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461760.1;locus_tag=C9E95_RS05470;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_000010816.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 14715 16154 . + . ID=gene-C9E95_RS05475;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=C9E95_RS05475;old_locus_tag=C9E95_05615 NZ_PYJW01000058.1 Protein Homology CDS 14715 16154 . + 0 ID=cds-WP_080203808.1;Parent=gene-C9E95_RS05475;Dbxref=GenBank:WP_080203808.1;Name=WP_080203808.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461761.1;locus_tag=C9E95_RS05475;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_080203808.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 16151 17284 . + . ID=gene-C9E95_RS05480;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=C9E95_RS05480;old_locus_tag=C9E95_05620 NZ_PYJW01000058.1 Protein Homology CDS 16151 17284 . + 0 ID=cds-WP_058107533.1;Parent=gene-C9E95_RS05480;Dbxref=GenBank:WP_058107533.1;Name=WP_058107533.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461762.1;locus_tag=C9E95_RS05480;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_058107533.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 17381 19621 . - . ID=gene-C9E95_RS05485;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=C9E95_RS05485;old_locus_tag=C9E95_05625 NZ_PYJW01000058.1 Protein Homology CDS 17381 19621 . - 0 ID=cds-WP_080203809.1;Parent=gene-C9E95_RS05485;Dbxref=GenBank:WP_080203809.1;Name=WP_080203809.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461763.1;locus_tag=C9E95_RS05485;product=carbamoyltransferase HypF;protein_id=WP_080203809.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 19767 20312 . - . ID=gene-C9E95_RS05490;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=C9E95_RS05490;old_locus_tag=C9E95_05630 NZ_PYJW01000058.1 Protein Homology CDS 19767 20312 . - 0 ID=cds-WP_001078791.1;Parent=gene-C9E95_RS05490;Dbxref=GenBank:WP_001078791.1;Name=WP_001078791.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461764.1;locus_tag=C9E95_RS05490;product=electron transport protein HydN;protein_id=WP_001078791.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 20513 21322 . - . ID=gene-C9E95_RS05495;Name=C9E95_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05495;old_locus_tag=C9E95_05635 NZ_PYJW01000058.1 Protein Homology CDS 20513 21322 . - 0 ID=cds-WP_000902280.1;Parent=gene-C9E95_RS05495;Dbxref=GenBank:WP_000902280.1;Name=WP_000902280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461765.1;locus_tag=C9E95_RS05495;product=hypothetical protein;protein_id=WP_000902280.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 21349 21819 . - . ID=gene-C9E95_RS05500;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=C9E95_RS05500;old_locus_tag=C9E95_05640 NZ_PYJW01000058.1 Protein Homology CDS 21349 21819 . - 0 ID=cds-WP_000132984.1;Parent=gene-C9E95_RS05500;Dbxref=GenBank:WP_000132984.1;Name=WP_000132984.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461766.1;locus_tag=C9E95_RS05500;product=hydrogenase maturation peptidase HycI;protein_id=WP_000132984.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 21812 22222 . - . ID=gene-C9E95_RS05505;Name=C9E95_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05505;old_locus_tag=C9E95_05645 NZ_PYJW01000058.1 Protein Homology CDS 21812 22222 . - 0 ID=cds-WP_000003725.1;Parent=gene-C9E95_RS05505;Dbxref=GenBank:WP_000003725.1;Name=WP_000003725.1;Ontology_term=GO:0065003;gbkey=CDS;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461767.1;locus_tag=C9E95_RS05505;product=formate hydrogenlyase maturation HycH family protein;protein_id=WP_000003725.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 22219 22986 . - . ID=gene-C9E95_RS05510;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=C9E95_RS05510;old_locus_tag=C9E95_05650 NZ_PYJW01000058.1 Protein Homology CDS 22219 22986 . - 0 ID=cds-WP_000067419.1;Parent=gene-C9E95_RS05510;Dbxref=GenBank:WP_000067419.1;Name=WP_000067419.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461768.1;locus_tag=C9E95_RS05510;product=formate hydrogenlyase subunit HycG;protein_id=WP_000067419.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 22986 23528 . - . ID=gene-C9E95_RS05515;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=C9E95_RS05515;old_locus_tag=C9E95_05655 NZ_PYJW01000058.1 Protein Homology CDS 22986 23528 . - 0 ID=cds-WP_000493773.1;Parent=gene-C9E95_RS05515;Dbxref=GenBank:WP_000493773.1;Name=WP_000493773.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461769.1;locus_tag=C9E95_RS05515;product=formate hydrogenlyase subunit HycF;protein_id=WP_000493773.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 23538 25247 . - . ID=gene-C9E95_RS05520;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=C9E95_RS05520;old_locus_tag=C9E95_05660 NZ_PYJW01000058.1 Protein Homology CDS 23538 25247 . - 0 ID=cds-WP_001288155.1;Parent=gene-C9E95_RS05520;Dbxref=GenBank:WP_001288155.1;Name=WP_001288155.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=C9E95_RS05520;product=formate hydrogenlyase subunit HycE;protein_id=WP_001288155.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 25265 26188 . - . ID=gene-C9E95_RS05525;Name=C9E95_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05525;old_locus_tag=C9E95_05665 NZ_PYJW01000058.1 Protein Homology CDS 25265 26188 . - 0 ID=cds-WP_000110563.1;Parent=gene-C9E95_RS05525;Dbxref=GenBank:WP_000110563.1;Name=WP_000110563.1;Ontology_term=GO:0022900,GO:0016491,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=oxidoreductase activity|0016491||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461771.1;locus_tag=C9E95_RS05525;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_000110563.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 26191 28017 . - . ID=gene-C9E95_RS05530;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=C9E95_RS05530;old_locus_tag=C9E95_05670 NZ_PYJW01000058.1 Protein Homology CDS 26191 28017 . - 0 ID=cds-WP_023203977.1;Parent=gene-C9E95_RS05530;Dbxref=GenBank:WP_023203977.1;Name=WP_023203977.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461772.2;locus_tag=C9E95_RS05530;product=formate hydrogenlyase subunit 3;protein_id=WP_023203977.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 28017 28625 . - . ID=gene-C9E95_RS05535;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=C9E95_RS05535;old_locus_tag=C9E95_05675 NZ_PYJW01000058.1 Protein Homology CDS 28017 28625 . - 0 ID=cds-WP_001079164.1;Parent=gene-C9E95_RS05535;Dbxref=GenBank:WP_001079164.1;Name=WP_001079164.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461773.1;locus_tag=C9E95_RS05535;product=formate hydrogenlyase subunit HycB;protein_id=WP_001079164.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 28771 29232 . - . ID=gene-C9E95_RS05540;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=C9E95_RS05540;old_locus_tag=C9E95_05680 NZ_PYJW01000058.1 Protein Homology CDS 28771 29232 . - 0 ID=cds-WP_000158074.1;Parent=gene-C9E95_RS05540;Dbxref=GenBank:WP_000158074.1;Name=WP_000158074.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461774.1;locus_tag=C9E95_RS05540;product=formate hydrogenlyase regulator HycA;protein_id=WP_000158074.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 29442 29798 . + . ID=gene-C9E95_RS05550;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=C9E95_RS05550;old_locus_tag=C9E95_05690 NZ_PYJW01000058.1 Protein Homology CDS 29442 29798 . + 0 ID=cds-WP_000544461.1;Parent=gene-C9E95_RS05550;Dbxref=GenBank:WP_000544461.1;Name=WP_000544461.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461775.1;locus_tag=C9E95_RS05550;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544461.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 29867 30739 . + . ID=gene-C9E95_RS05555;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=C9E95_RS05555;old_locus_tag=C9E95_05695 NZ_PYJW01000058.1 Protein Homology CDS 29867 30739 . + 0 ID=cds-WP_000337636.1;Parent=gene-C9E95_RS05555;Dbxref=GenBank:WP_000337636.1;Name=WP_000337636.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461776.1;locus_tag=C9E95_RS05555;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_000337636.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 30730 31002 . + . ID=gene-C9E95_RS05560;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=C9E95_RS05560;old_locus_tag=C9E95_05700 NZ_PYJW01000058.1 Protein Homology CDS 30730 31002 . + 0 ID=cds-WP_000334871.1;Parent=gene-C9E95_RS05560;Dbxref=GenBank:WP_000334871.1;Name=WP_000334871.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461777.1;locus_tag=C9E95_RS05560;product=hydrogenase 3 maturation protein HypC;protein_id=WP_000334871.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 31002 32123 . + . ID=gene-C9E95_RS05565;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=C9E95_RS05565;old_locus_tag=C9E95_05705 NZ_PYJW01000058.1 Protein Homology CDS 31002 32123 . + 0 ID=cds-WP_080203810.1;Parent=gene-C9E95_RS05565;Dbxref=GenBank:WP_080203810.1;Name=WP_080203810.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461778.2;locus_tag=C9E95_RS05565;product=hydrogenase formation protein HypD;protein_id=WP_080203810.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 32120 33130 . + . ID=gene-C9E95_RS05570;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=C9E95_RS05570;old_locus_tag=C9E95_05710 NZ_PYJW01000058.1 Protein Homology CDS 32120 33130 . + 0 ID=cds-WP_001059962.1;Parent=gene-C9E95_RS05570;Dbxref=GenBank:WP_001059962.1;Name=WP_001059962.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=C9E95_RS05570;product=hydrogenase expression/formation protein HypE;protein_id=WP_001059962.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 33349 35427 . + . ID=gene-C9E95_RS05575;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=C9E95_RS05575;old_locus_tag=C9E95_05715 NZ_PYJW01000058.1 Protein Homology CDS 33349 35427 . + 0 ID=cds-WP_000122692.1;Parent=gene-C9E95_RS05575;Dbxref=GenBank:WP_000122692.1;Name=WP_000122692.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461780.1;locus_tag=C9E95_RS05575;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_000122692.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 35489 35833 . - . ID=gene-C9E95_RS05580;Name=C9E95_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05580;old_locus_tag=C9E95_05720 NZ_PYJW01000058.1 Protein Homology CDS 35489 35833 . - 0 ID=cds-WP_001117940.1;Parent=gene-C9E95_RS05580;Dbxref=GenBank:WP_001117940.1;Name=WP_001117940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461781.1;locus_tag=C9E95_RS05580;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_001117940.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 36015 36932 . + . ID=gene-C9E95_RS05585;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=C9E95_RS05585;old_locus_tag=C9E95_05725 NZ_PYJW01000058.1 Protein Homology CDS 36015 36932 . + 0 ID=cds-WP_000182930.1;Parent=gene-C9E95_RS05585;Dbxref=GenBank:WP_000182930.1;Name=WP_000182930.1;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461782.1;locus_tag=C9E95_RS05585;product=iron/manganese ABC transporter substrate-binding protein SitA;protein_id=WP_000182930.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 36929 37750 . + . ID=gene-C9E95_RS05590;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=C9E95_RS05590;old_locus_tag=C9E95_05730 NZ_PYJW01000058.1 Protein Homology CDS 36929 37750 . + 0 ID=cds-WP_000083151.1;Parent=gene-C9E95_RS05590;Dbxref=GenBank:WP_000083151.1;Name=WP_000083151.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461783.1;locus_tag=C9E95_RS05590;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=WP_000083151.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 37747 38607 . + . ID=gene-C9E95_RS05595;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=C9E95_RS05595;old_locus_tag=C9E95_05735 NZ_PYJW01000058.1 Protein Homology CDS 37747 38607 . + 0 ID=cds-WP_001104336.1;Parent=gene-C9E95_RS05595;Dbxref=GenBank:WP_001104336.1;Name=WP_001104336.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461784.1;locus_tag=C9E95_RS05595;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WP_001104336.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 38598 39446 . + . ID=gene-C9E95_RS05600;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=C9E95_RS05600;old_locus_tag=C9E95_05740 NZ_PYJW01000058.1 Protein Homology CDS 38598 39446 . + 0 ID=cds-WP_000480209.1;Parent=gene-C9E95_RS05600;Dbxref=GenBank:WP_000480209.1;Name=WP_000480209.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461785.1;locus_tag=C9E95_RS05600;product=iron/manganese ABC transporter permease subunit SitD;protein_id=WP_000480209.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 39545 40453 . - . ID=gene-C9E95_RS05605;Name=avrA;gbkey=Gene;gene=avrA;gene_biotype=protein_coding;locus_tag=C9E95_RS05605;old_locus_tag=C9E95_05745 NZ_PYJW01000058.1 Protein Homology CDS 39545 40453 . - 0 ID=cds-WP_077905364.1;Parent=gene-C9E95_RS05605;Dbxref=GenBank:WP_077905364.1;Name=WP_077905364.1;gbkey=CDS;gene=avrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461786.1;locus_tag=C9E95_RS05605;product=type III secretion system YopJ family effector AvrA;protein_id=WP_077905364.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 40614 41369 . - . ID=gene-C9E95_RS05610;Name=sprB;gbkey=Gene;gene=sprB;gene_biotype=protein_coding;locus_tag=C9E95_RS05610;old_locus_tag=C9E95_05750 NZ_PYJW01000058.1 Protein Homology CDS 40614 41369 . - 0 ID=cds-WP_001246668.1;Parent=gene-C9E95_RS05610;Dbxref=GenBank:WP_001246668.1;Name=WP_001246668.1;gbkey=CDS;gene=sprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461787.1;locus_tag=C9E95_RS05610;product=transcriptional regulator SprB;protein_id=WP_001246668.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 41754 42641 . - . ID=gene-C9E95_RS05615;Name=hilC;gbkey=Gene;gene=hilC;gene_biotype=protein_coding;locus_tag=C9E95_RS05615;old_locus_tag=C9E95_05760 NZ_PYJW01000058.1 Protein Homology CDS 41754 42641 . - 0 ID=cds-WP_000243998.1;Parent=gene-C9E95_RS05615;Dbxref=GenBank:WP_000243998.1;Name=WP_000243998.1;gbkey=CDS;gene=hilC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461788.1;locus_tag=C9E95_RS05615;product=invasion transcriptional regulator HilC;protein_id=WP_000243998.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 42977 43429 . - . ID=gene-C9E95_RS05620;Name=C9E95_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05620;old_locus_tag=C9E95_05765 NZ_PYJW01000058.1 Protein Homology CDS 42977 43429 . - 0 ID=cds-WP_000612179.1;Parent=gene-C9E95_RS05620;Dbxref=GenBank:WP_000612179.1;Name=WP_000612179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461789.1;locus_tag=C9E95_RS05620;product=type III secretion system effector protein OrgC;protein_id=WP_000612179.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 43426 44106 . - . ID=gene-C9E95_RS05625;Name=orgB;gbkey=Gene;gene=orgB;gene_biotype=protein_coding;locus_tag=C9E95_RS05625;old_locus_tag=C9E95_05770 NZ_PYJW01000058.1 Protein Homology CDS 43426 44106 . - 0 ID=cds-WP_000916654.1;Parent=gene-C9E95_RS05625;Dbxref=GenBank:WP_000916654.1;Name=WP_000916654.1;gbkey=CDS;gene=orgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461790.1;locus_tag=C9E95_RS05625;product=type III secretion system linker protein OrgB;protein_id=WP_000916654.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 44063 44662 . - . ID=gene-C9E95_RS05630;Name=orgA;gbkey=Gene;gene=orgA;gene_biotype=protein_coding;locus_tag=C9E95_RS05630;old_locus_tag=C9E95_05775 NZ_PYJW01000058.1 Protein Homology CDS 44063 44662 . - 0 ID=cds-WP_001574876.1;Parent=gene-C9E95_RS05630;Dbxref=GenBank:WP_001574876.1;Name=WP_001574876.1;gbkey=CDS;gene=orgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461791.1;locus_tag=C9E95_RS05630;product=oxygen-regulated invasion protein OrgA;protein_id=WP_001574876.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 44634 45392 . - . ID=gene-C9E95_RS05635;Name=prgK;gbkey=Gene;gene=prgK;gene_biotype=protein_coding;locus_tag=C9E95_RS05635;old_locus_tag=C9E95_05780 NZ_PYJW01000058.1 Protein Homology CDS 44634 45392 . - 0 ID=cds-WP_000621238.1;Parent=gene-C9E95_RS05635;Dbxref=GenBank:WP_000621238.1;Name=WP_000621238.1;gbkey=CDS;gene=prgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461792.1;locus_tag=C9E95_RS05635;product=type III secretion system inner membrane ring lipoprotein PrgK;protein_id=WP_000621238.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 45389 45694 . - . ID=gene-C9E95_RS05640;Name=prgJ;gbkey=Gene;gene=prgJ;gene_biotype=protein_coding;locus_tag=C9E95_RS05640;old_locus_tag=C9E95_05785 NZ_PYJW01000058.1 Protein Homology CDS 45389 45694 . - 0 ID=cds-WP_000020431.1;Parent=gene-C9E95_RS05640;Dbxref=GenBank:WP_000020431.1;Name=WP_000020431.1;gbkey=CDS;gene=prgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461793.1;locus_tag=C9E95_RS05640;product=type III secretion system inner rod protein PrgJ;protein_id=WP_000020431.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 45713 45955 . - . ID=gene-C9E95_RS05645;Name=prgI;gbkey=Gene;gene=prgI;gene_biotype=protein_coding;locus_tag=C9E95_RS05645;old_locus_tag=C9E95_05790 NZ_PYJW01000058.1 Protein Homology CDS 45713 45955 . - 0 ID=cds-WP_000235228.1;Parent=gene-C9E95_RS05645;Dbxref=GenBank:WP_000235228.1;Name=WP_000235228.1;gbkey=CDS;gene=prgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461794.1;locus_tag=C9E95_RS05645;product=type III secretion system needle filament protein PrgI;protein_id=WP_000235228.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 45980 47158 . - . ID=gene-C9E95_RS05650;Name=prgH;gbkey=Gene;gene=prgH;gene_biotype=protein_coding;locus_tag=C9E95_RS05650;old_locus_tag=C9E95_05795 NZ_PYJW01000058.1 Protein Homology CDS 45980 47158 . - 0 ID=cds-WP_000450196.1;Parent=gene-C9E95_RS05650;Dbxref=GenBank:WP_000450196.1;Name=WP_000450196.1;gbkey=CDS;gene=prgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461795.1;locus_tag=C9E95_RS05650;product=type III secretion system inner membrane ring protein PrgH;protein_id=WP_000450196.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 47474 48403 . + . ID=gene-C9E95_RS05655;Name=hilD;gbkey=Gene;gene=hilD;gene_biotype=protein_coding;locus_tag=C9E95_RS05655;old_locus_tag=C9E95_05800 NZ_PYJW01000058.1 Protein Homology CDS 47474 48403 . + 0 ID=cds-WP_000432700.1;Parent=gene-C9E95_RS05655;Dbxref=GenBank:WP_000432700.1;Name=WP_000432700.1;gbkey=CDS;gene=hilD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461796.1;locus_tag=C9E95_RS05655;product=transcriptional regulator HilD;protein_id=WP_000432700.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 49494 51155 . + . ID=gene-C9E95_RS05660;Name=hilA;gbkey=Gene;gene=hilA;gene_biotype=protein_coding;locus_tag=C9E95_RS05660;old_locus_tag=C9E95_05805 NZ_PYJW01000058.1 Protein Homology CDS 49494 51155 . + 0 ID=cds-WP_001120086.1;Parent=gene-C9E95_RS05660;Dbxref=GenBank:WP_001120086.1;Name=WP_001120086.1;gbkey=CDS;gene=hilA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461797.1;locus_tag=C9E95_RS05660;product=transcriptional regulator HilA;protein_id=WP_001120086.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 51173 51655 . + . ID=gene-C9E95_RS05665;Name=iagB;gbkey=Gene;gene=iagB;gene_biotype=protein_coding;locus_tag=C9E95_RS05665;old_locus_tag=C9E95_05810 NZ_PYJW01000058.1 Protein Homology CDS 51173 51655 . + 0 ID=cds-WP_000558928.1;Parent=gene-C9E95_RS05665;Dbxref=GenBank:WP_000558928.1;Name=WP_000558928.1;gbkey=CDS;gene=iagB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461798.1;locus_tag=C9E95_RS05665;product=SPI-1 type III secretion system invasion protein IagB;protein_id=WP_000558928.1;transl_table=11 NZ_PYJW01000058.1 RefSeq pseudogene 51709 53340 . - . ID=gene-C9E95_RS05670;Name=sptP;gbkey=Gene;gene=sptP;gene_biotype=pseudogene;locus_tag=C9E95_RS05670;old_locus_tag=C9E95_05815;pseudo=true NZ_PYJW01000058.1 Protein Homology CDS 51709 53340 . - 0 ID=cds-C9E95_RS05670;Parent=gene-C9E95_RS05670;Note=internal stop;gbkey=CDS;gene=sptP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461799.1;locus_tag=C9E95_RS05670;product=SPI-1 type III secretion system effector GTPase-activating protein SptP;pseudo=true;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 53327 53719 . - . ID=gene-C9E95_RS05675;Name=sicP;gbkey=Gene;gene=sicP;gene_biotype=protein_coding;locus_tag=C9E95_RS05675;old_locus_tag=C9E95_05820 NZ_PYJW01000058.1 Protein Homology CDS 53327 53719 . - 0 ID=cds-WP_001147852.1;Parent=gene-C9E95_RS05675;Dbxref=GenBank:WP_001147852.1;Name=WP_001147852.1;gbkey=CDS;gene=sicP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461800.1;locus_tag=C9E95_RS05675;product=chaperone SicP;protein_id=WP_001147852.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 53746 54006 . - . ID=gene-C9E95_RS05680;Name=C9E95_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05680;old_locus_tag=C9E95_05825 NZ_PYJW01000058.1 Protein Homology CDS 53746 54006 . - 0 ID=cds-WP_000692254.1;Parent=gene-C9E95_RS05680;Dbxref=GenBank:WP_000692254.1;Name=WP_000692254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449260.1;locus_tag=C9E95_RS05680;product=hypothetical protein;protein_id=WP_000692254.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 54050 54298 . - . ID=gene-C9E95_RS05685;Name=C9E95_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05685;old_locus_tag=C9E95_05830 NZ_PYJW01000058.1 Protein Homology CDS 54050 54298 . - 0 ID=cds-WP_001055579.1;Parent=gene-C9E95_RS05685;Dbxref=GenBank:WP_001055579.1;Name=WP_001055579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461802.1;locus_tag=C9E95_RS05685;product=acyl carrier protein;protein_id=WP_001055579.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 54317 56374 . - . ID=gene-C9E95_RS05690;Name=sipA;gbkey=Gene;gene=sipA;gene_biotype=protein_coding;locus_tag=C9E95_RS05690;old_locus_tag=C9E95_05835 NZ_PYJW01000058.1 Protein Homology CDS 54317 56374 . - 0 ID=cds-WP_000258819.1;Parent=gene-C9E95_RS05690;Dbxref=GenBank:WP_000258819.1;Name=WP_000258819.1;gbkey=CDS;gene=sipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461803.1;locus_tag=C9E95_RS05690;product=SPI-1 type III secretion system effector SipA;protein_id=WP_000258819.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 56393 57424 . - . ID=gene-C9E95_RS05695;Name=sipD;gbkey=Gene;gene=sipD;gene_biotype=protein_coding;locus_tag=C9E95_RS05695;old_locus_tag=C9E95_05840 NZ_PYJW01000058.1 Protein Homology CDS 56393 57424 . - 0 ID=cds-WP_000932249.1;Parent=gene-C9E95_RS05695;Dbxref=GenBank:WP_000932249.1;Name=WP_000932249.1;gbkey=CDS;gene=sipD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461804.1;locus_tag=C9E95_RS05695;product=SPI-1 type III secretion system needle tip complex protein SipD;protein_id=WP_000932249.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 57495 58724 . - . ID=gene-C9E95_RS05700;Name=sipC;gbkey=Gene;gene=sipC;gene_biotype=protein_coding;locus_tag=C9E95_RS05700;old_locus_tag=C9E95_05845 NZ_PYJW01000058.1 Protein Homology CDS 57495 58724 . - 0 ID=cds-WP_000909019.1;Parent=gene-C9E95_RS05700;Dbxref=GenBank:WP_000909019.1;Name=WP_000909019.1;gbkey=CDS;gene=sipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461805.1;locus_tag=C9E95_RS05700;product=SPI-1 type III secretion system needle tip complex protein SipC;protein_id=WP_000909019.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 58752 60533 . - . ID=gene-C9E95_RS05705;Name=sipB;gbkey=Gene;gene=sipB;gene_biotype=protein_coding;locus_tag=C9E95_RS05705;old_locus_tag=C9E95_05850 NZ_PYJW01000058.1 Protein Homology CDS 58752 60533 . - 0 ID=cds-WP_000245788.1;Parent=gene-C9E95_RS05705;Dbxref=GenBank:WP_000245788.1;Name=WP_000245788.1;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461806.1;locus_tag=C9E95_RS05705;product=SPI-1 type III secretion system needle tip complex protein SipB;protein_id=WP_000245788.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 60536 61033 . - . ID=gene-C9E95_RS05710;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=C9E95_RS05710;old_locus_tag=C9E95_05855 NZ_PYJW01000058.1 Protein Homology CDS 60536 61033 . - 0 ID=cds-WP_080203811.1;Parent=gene-C9E95_RS05710;Dbxref=GenBank:WP_080203811.1;Name=WP_080203811.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461807.1;locus_tag=C9E95_RS05710;product=SycD/LcrH family type III secretion system chaperone SicA;protein_id=WP_080203811.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 61171 62241 . - . ID=gene-C9E95_RS05715;Name=spaS;gbkey=Gene;gene=spaS;gene_biotype=protein_coding;locus_tag=C9E95_RS05715;old_locus_tag=C9E95_05860 NZ_PYJW01000058.1 Protein Homology CDS 61171 62241 . - 0 ID=cds-WP_000097717.1;Parent=gene-C9E95_RS05715;Dbxref=GenBank:WP_000097717.1;Name=WP_000097717.1;gbkey=CDS;gene=spaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461808.1;locus_tag=C9E95_RS05715;product=SPI-1 type III secretion system export apparatus protein SpaS;protein_id=WP_000097717.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 62228 63019 . - . ID=gene-C9E95_RS05720;Name=spaR;gbkey=Gene;gene=spaR;gene_biotype=protein_coding;locus_tag=C9E95_RS05720;old_locus_tag=C9E95_05865 NZ_PYJW01000058.1 Protein Homology CDS 62228 63019 . - 0 ID=cds-WP_000498965.1;Parent=gene-C9E95_RS05720;Dbxref=GenBank:WP_000498965.1;Name=WP_000498965.1;gbkey=CDS;gene=spaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461809.1;locus_tag=C9E95_RS05720;product=SPI-1 type III secretion system export apparatus protein SpaR;protein_id=WP_000498965.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 63023 63283 . - . ID=gene-C9E95_RS05725;Name=spaQ;gbkey=Gene;gene=spaQ;gene_biotype=protein_coding;locus_tag=C9E95_RS05725;old_locus_tag=C9E95_05870 NZ_PYJW01000058.1 Protein Homology CDS 63023 63283 . - 0 ID=cds-WP_000342503.1;Parent=gene-C9E95_RS05725;Dbxref=GenBank:WP_000342503.1;Name=WP_000342503.1;gbkey=CDS;gene=spaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461810.1;locus_tag=C9E95_RS05725;product=SPI-1 type III secretion system export apparatus protein SpaQ;protein_id=WP_000342503.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 63309 63983 . - . ID=gene-C9E95_RS05730;Name=spaP;gbkey=Gene;gene=spaP;gene_biotype=protein_coding;locus_tag=C9E95_RS05730;old_locus_tag=C9E95_05875 NZ_PYJW01000058.1 Protein Homology CDS 63309 63983 . - 0 ID=cds-WP_000526014.1;Parent=gene-C9E95_RS05730;Dbxref=GenBank:WP_000526014.1;Name=WP_000526014.1;gbkey=CDS;gene=spaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461811.1;locus_tag=C9E95_RS05730;product=SPI-1 type III secretion system export apparatus protein SpaP;protein_id=WP_000526014.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 63973 64884 . - . ID=gene-C9E95_RS05735;Name=spaO;gbkey=Gene;gene=spaO;gene_biotype=protein_coding;locus_tag=C9E95_RS05735;old_locus_tag=C9E95_05880 NZ_PYJW01000058.1 Protein Homology CDS 63973 64884 . - 0 ID=cds-WP_000058741.1;Parent=gene-C9E95_RS05735;Dbxref=GenBank:WP_000058741.1;Name=WP_000058741.1;gbkey=CDS;gene=spaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461812.1;locus_tag=C9E95_RS05735;product=SPI-1 type III secretion system protein SpaO;protein_id=WP_000058741.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 64884 65894 . - . ID=gene-C9E95_RS05740;Name=spaN;gbkey=Gene;gene=spaN;gene_biotype=protein_coding;locus_tag=C9E95_RS05740;old_locus_tag=C9E95_05885 NZ_PYJW01000058.1 Protein Homology CDS 64884 65894 . - 0 ID=cds-WP_000503107.1;Parent=gene-C9E95_RS05740;Dbxref=GenBank:WP_000503107.1;Name=WP_000503107.1;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461813.1;locus_tag=C9E95_RS05740;product=SPI-1 type III secretion system protein SpaN;protein_id=WP_000503107.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 65894 66337 . - . ID=gene-C9E95_RS05745;Name=spaM;gbkey=Gene;gene=spaM;gene_biotype=protein_coding;locus_tag=C9E95_RS05745;old_locus_tag=C9E95_05890 NZ_PYJW01000058.1 Protein Homology CDS 65894 66337 . - 0 ID=cds-WP_000555884.1;Parent=gene-C9E95_RS05745;Dbxref=GenBank:WP_000555884.1;Name=WP_000555884.1;gbkey=CDS;gene=spaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461814.1;locus_tag=C9E95_RS05745;product=SPI-1 type III secretion system protein SpaM;protein_id=WP_000555884.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 66315 67610 . - . ID=gene-C9E95_RS05750;Name=invC;gbkey=Gene;gene=invC;gene_biotype=protein_coding;locus_tag=C9E95_RS05750;old_locus_tag=C9E95_05895 NZ_PYJW01000058.1 Protein Homology CDS 66315 67610 . - 0 ID=cds-WP_080203812.1;Parent=gene-C9E95_RS05750;Dbxref=GenBank:WP_080203812.1;Name=WP_080203812.1;gbkey=CDS;gene=invC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461815.1;locus_tag=C9E95_RS05750;product=SctN family type III secretion system ATPase InvC;protein_id=WP_080203812.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 67607 68014 . - . ID=gene-C9E95_RS05755;Name=spaK;gbkey=Gene;gene=spaK;gene_biotype=protein_coding;locus_tag=C9E95_RS05755;old_locus_tag=C9E95_05900 NZ_PYJW01000058.1 Protein Homology CDS 67607 68014 . - 0 ID=cds-WP_001164066.1;Parent=gene-C9E95_RS05755;Dbxref=GenBank:WP_001164066.1;Name=WP_001164066.1;gbkey=CDS;gene=spaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461816.1;locus_tag=C9E95_RS05755;product=SPI-1 type III secretion system chaperone SpaK;protein_id=WP_001164066.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 68038 70095 . - . ID=gene-C9E95_RS05760;Name=invA;gbkey=Gene;gene=invA;gene_biotype=protein_coding;locus_tag=C9E95_RS05760;old_locus_tag=C9E95_05905 NZ_PYJW01000058.1 Protein Homology CDS 68038 70095 . - 0 ID=cds-WP_000927219.1;Parent=gene-C9E95_RS05760;Dbxref=GenBank:WP_000927219.1;Name=WP_000927219.1;gbkey=CDS;gene=invA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461817.1;locus_tag=C9E95_RS05760;product=type III secretion system export apparatus protein InvA;protein_id=WP_000927219.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 70120 71238 . - . ID=gene-C9E95_RS05765;Name=invE;gbkey=Gene;gene=invE;gene_biotype=protein_coding;locus_tag=C9E95_RS05765;old_locus_tag=C9E95_05910 NZ_PYJW01000058.1 Protein Homology CDS 70120 71238 . - 0 ID=cds-WP_000612171.1;Parent=gene-C9E95_RS05765;Dbxref=GenBank:WP_000612171.1;Name=WP_000612171.1;gbkey=CDS;gene=invE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461818.1;locus_tag=C9E95_RS05765;product=type III secretion system gatekeeper InvE;protein_id=WP_000612171.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 71235 72923 . - . ID=gene-C9E95_RS05770;Name=invG;gbkey=Gene;gene=invG;gene_biotype=protein_coding;locus_tag=C9E95_RS05770;old_locus_tag=C9E95_05915 NZ_PYJW01000058.1 Protein Homology CDS 71235 72923 . - 0 ID=cds-WP_000848114.1;Parent=gene-C9E95_RS05770;Dbxref=GenBank:WP_000848114.1;Name=WP_000848114.1;gbkey=CDS;gene=invG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461819.1;locus_tag=C9E95_RS05770;product=type III secretion system outer membrane ring protein InvG;protein_id=WP_000848114.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 72920 73570 . - . ID=gene-C9E95_RS05775;Name=invF;gbkey=Gene;gene=invF;gene_biotype=protein_coding;locus_tag=C9E95_RS05775;old_locus_tag=C9E95_05920 NZ_PYJW01000058.1 Protein Homology CDS 72920 73570 . - 0 ID=cds-WP_001728903.1;Parent=gene-C9E95_RS05775;Dbxref=GenBank:WP_001728903.1;Name=WP_001728903.1;gbkey=CDS;gene=invF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461820.1;locus_tag=C9E95_RS05775;product=type III secretion system transcriptional activator InvF;protein_id=WP_001728903.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 74027 74470 . + . ID=gene-C9E95_RS05780;Name=invH;gbkey=Gene;gene=invH;gene_biotype=protein_coding;locus_tag=C9E95_RS05780;old_locus_tag=C9E95_05925 NZ_PYJW01000058.1 Protein Homology CDS 74027 74470 . + 0 ID=cds-WP_000715096.1;Parent=gene-C9E95_RS05780;Dbxref=GenBank:WP_000715096.1;Name=WP_000715096.1;gbkey=CDS;gene=invH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461821.1;locus_tag=C9E95_RS05780;product=SPI-1 type III secretion system invasion lipoprotein InvH;protein_id=WP_000715096.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 74902 75351 . + . ID=gene-C9E95_RS05785;Name=C9E95_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05785;old_locus_tag=C9E95_05930 NZ_PYJW01000058.1 Protein Homology CDS 74902 75351 . + 0 ID=cds-WP_000381612.1;Parent=gene-C9E95_RS05785;Dbxref=GenBank:WP_000381612.1;Name=WP_000381612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461822.1;locus_tag=C9E95_RS05785;product=STM2901 family protein;protein_id=WP_000381612.1;transl_table=11 NZ_PYJW01000058.1 RefSeq gene 75336 75683 . + . ID=gene-C9E95_RS05790;Name=C9E95_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05790;old_locus_tag=C9E95_05935 NZ_PYJW01000058.1 Protein Homology CDS 75336 75683 . + 0 ID=cds-WP_001669174.1;Parent=gene-C9E95_RS05790;Dbxref=GenBank:WP_001669174.1;Name=WP_001669174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461823.1;locus_tag=C9E95_RS05790;product=DUF1493 family protein;protein_id=WP_001669174.1;transl_table=11 NZ_PYJW01000058.1 RefSeq pseudogene 75956 76157 . - . ID=gene-C9E95_RS05795;Name=C9E95_RS05795;end_range=76157,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS05795;old_locus_tag=C9E95_05940;partial=true;pseudo=true NZ_PYJW01000058.1 Protein Homology CDS 75956 76157 . - 1 ID=cds-C9E95_RS05795;Parent=gene-C9E95_RS05795;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=76157,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461824.1;locus_tag=C9E95_RS05795;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_PYJW01000093.1 1 1833 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000093.1 RefSeq region 1 1833 . + . ID=NZ_PYJW01000093.1:1..1833;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000093.1 RefSeq gene 98 1027 . - . ID=gene-C9E95_RS10120;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=C9E95_RS10120;old_locus_tag=C9E95_10370 NZ_PYJW01000093.1 Protein Homology CDS 98 1027 . - 0 ID=cds-WP_001122767.1;Parent=gene-C9E95_RS10120;Dbxref=GenBank:WP_001122767.1;Name=WP_001122767.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=C9E95_RS10120;product=homoserine O-acetyltransferase MetA;protein_id=WP_001122767.1;transl_table=11 NZ_PYJW01000093.1 RefSeq gene 1184 1621 . + . ID=gene-C9E95_RS10125;Name=C9E95_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10125;old_locus_tag=C9E95_10375 NZ_PYJW01000093.1 Protein Homology CDS 1184 1621 . + 0 ID=cds-WP_001631763.1;Parent=gene-C9E95_RS10125;Dbxref=GenBank:WP_001631763.1;Name=WP_001631763.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463046.1;locus_tag=C9E95_RS10125;product=acetyltransferase;protein_id=WP_001631763.1;transl_table=11 ##sequence-region NZ_PYJW01000133.1 1 1784 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000133.1 RefSeq region 1 1784 . + . ID=NZ_PYJW01000133.1:1..1784;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000133.1 RefSeq gene 281 913 . - . ID=gene-C9E95_RS13905;Name=C9E95_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13905;old_locus_tag=C9E95_14270 NZ_PYJW01000133.1 Protein Homology CDS 281 913 . - 0 ID=cds-WP_000835262.1;Parent=gene-C9E95_RS13905;Dbxref=GenBank:WP_000835262.1;Name=WP_000835262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461947.1;locus_tag=C9E95_RS13905;product=YfdX family protein;protein_id=WP_000835262.1;transl_table=11 NZ_PYJW01000133.1 RefSeq gene 960 1496 . - . ID=gene-C9E95_RS13910;Name=C9E95_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13910;old_locus_tag=C9E95_14275 NZ_PYJW01000133.1 Protein Homology CDS 960 1496 . - 0 ID=cds-WP_001038500.1;Parent=gene-C9E95_RS13910;Dbxref=GenBank:WP_001038500.1;Name=WP_001038500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461948.1;locus_tag=C9E95_RS13910;product=STM3031 family outer membrane protein;protein_id=WP_001038500.1;transl_table=11 NZ_PYJW01000133.1 RefSeq gene 1542 1784 . - . ID=gene-C9E95_RS23300;Name=C9E95_RS23300;end_range=1784,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23300;old_locus_tag=C9E95_14280;partial=true NZ_PYJW01000133.1 GeneMarkS-2+ CDS 1542 1784 . - 0 ID=cds-WP_245306709.1;Parent=gene-C9E95_RS23300;Dbxref=GenBank:WP_245306709.1;Name=WP_245306709.1;end_range=1784,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS23300;partial=true;product=hypothetical protein;protein_id=WP_245306709.1;transl_table=11 ##sequence-region NZ_PYJW01000186.1 1 1751 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000186.1 RefSeq region 1 1751 . + . ID=NZ_PYJW01000186.1:1..1751;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000186.1 RefSeq gene 27 1751 . - . ID=gene-C9E95_RS21780;Name=C9E95_RS21780;end_range=1751,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9E95_RS21780;old_locus_tag=C9E95_22315;partial=true NZ_PYJW01000186.1 cmsearch rRNA 27 1751 . - . ID=rna-C9E95_RS21780;Parent=gene-C9E95_RS21780;Dbxref=RFAM:RF02541;end_range=1751,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS21780;partial=true;product=23S ribosomal RNA NZ_PYJW01000186.1 cmsearch exon 27 1751 . - . ID=exon-C9E95_RS21780-1;Parent=rna-C9E95_RS21780;Dbxref=RFAM:RF02541;end_range=1751,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS21780;partial=true;product=23S ribosomal RNA ##sequence-region NZ_PYJW01000065.1 1 1739 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000065.1 RefSeq region 1 1739 . + . ID=NZ_PYJW01000065.1:1..1739;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000065.1 RefSeq gene 50 1591 . - . ID=gene-C9E95_RS06535;Name=C9E95_RS06535;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9E95_RS06535;old_locus_tag=C9E95_06690 NZ_PYJW01000065.1 cmsearch rRNA 50 1591 . - . ID=rna-C9E95_RS06535;Parent=gene-C9E95_RS06535;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS06535;product=16S ribosomal RNA NZ_PYJW01000065.1 cmsearch exon 50 1591 . - . ID=exon-C9E95_RS06535-1;Parent=rna-C9E95_RS06535;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS06535;product=16S ribosomal RNA ##sequence-region NZ_PYJW01000025.1 1 355 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000025.1 RefSeq region 1 355 . + . ID=NZ_PYJW01000025.1:1..355;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000025.1 RefSeq pseudogene 1 288 . + . ID=gene-C9E95_RS23235;Name=C9E95_RS23235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23235;old_locus_tag=C9E95_01210;partial=true;pseudo=true;start_range=.,1 NZ_PYJW01000025.1 Protein Homology CDS 1 288 . + 0 ID=cds-C9E95_RS23235;Parent=gene-C9E95_RS23235;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642135.1;locus_tag=C9E95_RS23235;partial=true;product=EpsG family protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJW01000134.1 1 1602 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000134.1 RefSeq region 1 1602 . + . ID=NZ_PYJW01000134.1:1..1602;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000134.1 RefSeq pseudogene 209 518 . - . ID=gene-C9E95_RS13920;Name=C9E95_RS13920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS13920;old_locus_tag=C9E95_14285;partial=true;pseudo=true;start_range=.,209 NZ_PYJW01000134.1 Protein Homology CDS 209 518 . - 0 ID=cds-C9E95_RS13920;Parent=gene-C9E95_RS13920;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=C9E95_RS13920;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,209;transl_table=11 NZ_PYJW01000134.1 RefSeq pseudogene 1133 1264 . + . ID=gene-C9E95_RS23195;Name=C9E95_RS23195;end_range=1264,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23195;partial=true;pseudo=true NZ_PYJW01000134.1 Protein Homology CDS 1133 1264 . + 0 ID=cds-C9E95_RS23195;Parent=gene-C9E95_RS23195;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1264,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671526.1;locus_tag=C9E95_RS23195;partial=true;product=transposase;pseudo=true;transl_table=11 ##sequence-region NZ_PYJW01000119.1 1 1574 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000119.1 RefSeq region 1 1574 . + . ID=NZ_PYJW01000119.1:1..1574;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000119.1 RefSeq gene 94 315 . - . ID=gene-C9E95_RS13110;Name=C9E95_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13110;old_locus_tag=C9E95_13445 NZ_PYJW01000119.1 Protein Homology CDS 94 315 . - 0 ID=cds-WP_001576552.1;Parent=gene-C9E95_RS13110;Dbxref=GenBank:WP_001576552.1;Name=WP_001576552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463181.1;locus_tag=C9E95_RS13110;product=hypothetical protein;protein_id=WP_001576552.1;transl_table=11 NZ_PYJW01000119.1 RefSeq pseudogene 432 1313 . + . ID=gene-C9E95_RS13115;Name=C9E95_RS13115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS13115;old_locus_tag=C9E95_13450;pseudo=true NZ_PYJW01000119.1 Protein Homology CDS 432 1313 . + 0 ID=cds-C9E95_RS13115;Parent=gene-C9E95_RS13115;Note=frameshifted%3B internal stop;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612101.1;locus_tag=C9E95_RS13115;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_PYJW01000087.1 1 75224 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000087.1 RefSeq region 1 75224 . + . ID=NZ_PYJW01000087.1:1..75224;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000087.1 RefSeq gene 275 1249 . + . ID=gene-C9E95_RS08920;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=C9E95_RS08920;old_locus_tag=C9E95_09150 NZ_PYJW01000087.1 Protein Homology CDS 275 1249 . + 0 ID=cds-WP_000130724.1;Parent=gene-C9E95_RS08920;Dbxref=GenBank:WP_000130724.1;Name=WP_000130724.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459367.1;locus_tag=C9E95_RS08920;product=porphobilinogen synthase;protein_id=WP_000130724.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 1353 3239 . - . ID=gene-C9E95_RS08925;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=C9E95_RS08925;old_locus_tag=C9E95_09155 NZ_PYJW01000087.1 Protein Homology CDS 1353 3239 . - 0 ID=cds-WP_000010220.1;Parent=gene-C9E95_RS08925;Dbxref=GenBank:WP_000010220.1;Name=WP_000010220.1;Ontology_term=GO:0019629,GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459366.1;locus_tag=C9E95_RS08925;product=propionate--CoA ligase;protein_id=WP_000010220.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 3280 4731 . - . ID=gene-C9E95_RS08930;Name=C9E95_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08930;old_locus_tag=C9E95_09160 NZ_PYJW01000087.1 Protein Homology CDS 3280 4731 . - 0 ID=cds-WP_000107067.1;Parent=gene-C9E95_RS08930;Dbxref=GenBank:WP_000107067.1;Name=WP_000107067.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459365.1;locus_tag=C9E95_RS08930;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WP_000107067.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 4771 5940 . - . ID=gene-C9E95_RS08935;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=C9E95_RS08935;old_locus_tag=C9E95_09165 NZ_PYJW01000087.1 Protein Homology CDS 4771 5940 . - 0 ID=cds-WP_000132746.1;Parent=gene-C9E95_RS08935;Dbxref=GenBank:WP_000132746.1;Name=WP_000132746.1;Ontology_term=GO:0019679,GO:0004108,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate (Si)-synthase activity|0004108||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459364.1;locus_tag=C9E95_RS08935;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_000132746.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 6063 6950 . - . ID=gene-C9E95_RS08940;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=C9E95_RS08940;old_locus_tag=C9E95_09170 NZ_PYJW01000087.1 Protein Homology CDS 6063 6950 . - 0 ID=cds-WP_000052221.1;Parent=gene-C9E95_RS08940;Dbxref=GenBank:WP_000052221.1;Name=WP_000052221.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459363.1;locus_tag=C9E95_RS08940;product=methylisocitrate lyase;protein_id=WP_000052221.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 7216 8841 . + . ID=gene-C9E95_RS08945;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=C9E95_RS08945;old_locus_tag=C9E95_09175 NZ_PYJW01000087.1 Protein Homology CDS 7216 8841 . + 0 ID=cds-WP_023993791.1;Parent=gene-C9E95_RS08945;Dbxref=GenBank:WP_023993791.1;Name=WP_023993791.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459362.1;locus_tag=C9E95_RS08945;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_023993791.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 8977 9252 . - . ID=gene-C9E95_RS08950;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=C9E95_RS08950;old_locus_tag=C9E95_09180 NZ_PYJW01000087.1 Protein Homology CDS 8977 9252 . - 0 ID=cds-WP_000848026.1;Parent=gene-C9E95_RS08950;Dbxref=GenBank:WP_000848026.1;Name=WP_000848026.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459361.1;locus_tag=C9E95_RS08950;product=DUF1471 family periplasmic protein YahO;protein_id=WP_000848026.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 9484 10116 . + . ID=gene-C9E95_RS08955;Name=C9E95_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08955;old_locus_tag=C9E95_09185 NZ_PYJW01000087.1 Protein Homology CDS 9484 10116 . + 0 ID=cds-WP_000433131.1;Parent=gene-C9E95_RS08955;Dbxref=GenBank:WP_000433131.1;Name=WP_000433131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459360.1;locus_tag=C9E95_RS08955;product=LysE family transporter;protein_id=WP_000433131.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 10157 12265 . - . ID=gene-C9E95_RS08960;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=C9E95_RS08960;old_locus_tag=C9E95_09190 NZ_PYJW01000087.1 Protein Homology CDS 10157 12265 . - 0 ID=cds-WP_001127717.1;Parent=gene-C9E95_RS08960;Dbxref=GenBank:WP_001127717.1;Name=WP_001127717.1;Ontology_term=GO:0015344,GO:0038023;gbkey=CDS;gene=foxA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=C9E95_RS08960;product=ferrioxamine B receptor FoxA;protein_id=WP_001127717.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 12411 13415 . - . ID=gene-C9E95_RS08965;Name=foxR;gbkey=Gene;gene=foxR;gene_biotype=protein_coding;locus_tag=C9E95_RS08965;old_locus_tag=C9E95_09195 NZ_PYJW01000087.1 Protein Homology CDS 12411 13415 . - 0 ID=cds-WP_000074601.1;Parent=gene-C9E95_RS08965;Dbxref=GenBank:WP_000074601.1;Name=WP_000074601.1;gbkey=CDS;gene=foxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459358.1;locus_tag=C9E95_RS08965;product=ferrioxamine uptake transcriptional regulator FoxR;protein_id=WP_000074601.1;transl_table=11 NZ_PYJW01000087.1 RefSeq pseudogene 13511 13703 . - . ID=gene-C9E95_RS23450;Name=C9E95_RS23450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23450;pseudo=true NZ_PYJW01000087.1 Protein Homology CDS 13511 13703 . - 0 ID=cds-C9E95_RS23450;Parent=gene-C9E95_RS23450;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459357.3;locus_tag=C9E95_RS23450;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 13622 13807 . - . ID=gene-C9E95_RS23655;Name=C9E95_RS23655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23655;old_locus_tag=C9E95_09200 NZ_PYJW01000087.1 Protein Homology CDS 13622 13807 . - 0 ID=cds-WP_305954967.1;Parent=gene-C9E95_RS23655;Dbxref=GenBank:WP_305954967.1;Name=WP_305954967.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022085.6;locus_tag=C9E95_RS23655;product=DUF2474 domain-containing protein;protein_id=WP_305954967.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 13753 14763 . - . ID=gene-C9E95_RS08975;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=C9E95_RS08975;old_locus_tag=C9E95_09205 NZ_PYJW01000087.1 Protein Homology CDS 13753 14763 . - 0 ID=cds-WP_000151049.1;Parent=gene-C9E95_RS08975;Dbxref=GenBank:WP_000151049.1;Name=WP_000151049.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459356.1;locus_tag=C9E95_RS08975;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000151049.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 14760 16163 . - . ID=gene-C9E95_RS08980;Name=C9E95_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08980;old_locus_tag=C9E95_09210 NZ_PYJW01000087.1 Protein Homology CDS 14760 16163 . - 0 ID=cds-WP_000393711.1;Parent=gene-C9E95_RS08980;Dbxref=GenBank:WP_000393711.1;Name=WP_000393711.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459355.1;locus_tag=C9E95_RS08980;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000393711.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 16280 16381 . - . ID=gene-C9E95_RS08985;Name=ssaA;gbkey=Gene;gene=ssaA;gene_biotype=protein_coding;locus_tag=C9E95_RS08985;old_locus_tag=C9E95_09215 NZ_PYJW01000087.1 Protein Homology CDS 16280 16381 . - 0 ID=cds-WP_000934834.1;Parent=gene-C9E95_RS08985;Dbxref=GenBank:WP_000934834.1;Name=WP_000934834.1;gbkey=CDS;gene=ssaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459354.1;locus_tag=C9E95_RS08985;product=small effector SsaA;protein_id=WP_000934834.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 16658 19630 . - . ID=gene-C9E95_RS08990;Name=C9E95_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08990;old_locus_tag=C9E95_09220 NZ_PYJW01000087.1 Protein Homology CDS 16658 19630 . - 0 ID=cds-WP_023994373.1;Parent=gene-C9E95_RS08990;Dbxref=GenBank:WP_023994373.1;Name=WP_023994373.1;Ontology_term=GO:0003677,GO:0016788;gbkey=CDS;go_function=DNA binding|0003677||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=C9E95_RS08990;product=type III restriction-modification system endonuclease;protein_id=WP_023994373.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 19640 21598 . - . ID=gene-C9E95_RS08995;Name=C9E95_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08995;old_locus_tag=C9E95_09225 NZ_PYJW01000087.1 Protein Homology CDS 19640 21598 . - 0 ID=cds-WP_023993793.1;Parent=gene-C9E95_RS08995;Dbxref=GenBank:WP_023993793.1;Name=WP_023993793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459352.1;locus_tag=C9E95_RS08995;product=site-specific DNA-methyltransferase;protein_id=WP_023993793.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 21787 23040 . - . ID=gene-C9E95_RS09000;Name=C9E95_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09000;old_locus_tag=C9E95_09230 NZ_PYJW01000087.1 Protein Homology CDS 21787 23040 . - 0 ID=cds-WP_000288502.1;Parent=gene-C9E95_RS09000;Dbxref=GenBank:WP_000288502.1;Name=WP_000288502.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459351.1;locus_tag=C9E95_RS09000;product=MFS transporter;protein_id=WP_000288502.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 23332 23526 . - . ID=gene-C9E95_RS09005;Name=golB;gbkey=Gene;gene=golB;gene_biotype=protein_coding;locus_tag=C9E95_RS09005;old_locus_tag=C9E95_09235 NZ_PYJW01000087.1 Protein Homology CDS 23332 23526 . - 0 ID=cds-WP_001159470.1;Parent=gene-C9E95_RS09005;Dbxref=GenBank:WP_001159470.1;Name=WP_001159470.1;gbkey=CDS;gene=golB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459350.1;locus_tag=C9E95_RS09005;product=gold resistance metallochaperone GolB;protein_id=WP_001159470.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 23604 24068 . - . ID=gene-C9E95_RS09010;Name=golS;gbkey=Gene;gene=golS;gene_biotype=protein_coding;locus_tag=C9E95_RS09010;old_locus_tag=C9E95_09240 NZ_PYJW01000087.1 Protein Homology CDS 23604 24068 . - 0 ID=cds-WP_001020583.1;Parent=gene-C9E95_RS09010;Dbxref=GenBank:WP_001020583.1;Name=WP_001020583.1;gbkey=CDS;gene=golS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459349.1;locus_tag=C9E95_RS09010;product=Au(I) sensor transcriptional regulator GolS;protein_id=WP_001020583.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 24080 26368 . - . ID=gene-C9E95_RS09015;Name=golT;gbkey=Gene;gene=golT;gene_biotype=protein_coding;locus_tag=C9E95_RS09015;old_locus_tag=C9E95_09245 NZ_PYJW01000087.1 Protein Homology CDS 24080 26368 . - 0 ID=cds-WP_135369835.1;Parent=gene-C9E95_RS09015;Dbxref=GenBank:WP_135369835.1;Name=WP_135369835.1;gbkey=CDS;gene=golT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083318.1;locus_tag=C9E95_RS09015;product=gold/copper-translocating P-type ATPase GolT;protein_id=WP_135369835.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 26645 27871 . + . ID=gene-C9E95_RS09020;Name=mdsA;gbkey=Gene;gene=mdsA;gene_biotype=protein_coding;locus_tag=C9E95_RS09020;old_locus_tag=C9E95_09250 NZ_PYJW01000087.1 Protein Homology CDS 26645 27871 . + 0 ID=cds-WP_080203934.1;Parent=gene-C9E95_RS09020;Dbxref=GenBank:WP_080203934.1;Name=WP_080203934.1;gbkey=CDS;gene=mdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459347.3;locus_tag=C9E95_RS09020;product=multidrug efflux RND transporter periplasmic adaptor subunit MdsA;protein_id=WP_080203934.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 27868 31035 . + . ID=gene-C9E95_RS09025;Name=mdsB;gbkey=Gene;gene=mdsB;gene_biotype=protein_coding;locus_tag=C9E95_RS09025;old_locus_tag=C9E95_09255 NZ_PYJW01000087.1 Protein Homology CDS 27868 31035 . + 0 ID=cds-WP_080203933.1;Parent=gene-C9E95_RS09025;Dbxref=GenBank:WP_080203933.1;Name=WP_080203933.1;gbkey=CDS;gene=mdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=C9E95_RS09025;product=multidrug efflux RND transporter permease subunit MdsB;protein_id=WP_080203933.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 31052 32509 . + . ID=gene-C9E95_RS09030;Name=mdsC;gbkey=Gene;gene=mdsC;gene_biotype=protein_coding;locus_tag=C9E95_RS09030;old_locus_tag=C9E95_09260 NZ_PYJW01000087.1 Protein Homology CDS 31052 32509 . + 0 ID=cds-WP_001575673.1;Parent=gene-C9E95_RS09030;Dbxref=GenBank:WP_001575673.1;Name=WP_001575673.1;gbkey=CDS;gene=mdsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521068.1;locus_tag=C9E95_RS09030;product=multidrug efflux transporter outer membrane subunit MdsC;protein_id=WP_001575673.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 32579 32938 . - . ID=gene-C9E95_RS09035;Name=C9E95_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09035;old_locus_tag=C9E95_09265 NZ_PYJW01000087.1 Protein Homology CDS 32579 32938 . - 0 ID=cds-WP_000722978.1;Parent=gene-C9E95_RS09035;Dbxref=GenBank:WP_000722978.1;Name=WP_000722978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459344.1;locus_tag=C9E95_RS09035;product=DUF4156 domain-containing protein;protein_id=WP_000722978.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 32996 33220 . - . ID=gene-C9E95_RS09040;Name=C9E95_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09040;old_locus_tag=C9E95_09270 NZ_PYJW01000087.1 Protein Homology CDS 32996 33220 . - 0 ID=cds-WP_080203932.1;Parent=gene-C9E95_RS09040;Dbxref=GenBank:WP_080203932.1;Name=WP_080203932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459343.1;locus_tag=C9E95_RS09040;product=hypothetical protein;protein_id=WP_080203932.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 33231 33872 . - . ID=gene-C9E95_RS09045;Name=C9E95_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09045;old_locus_tag=C9E95_09275 NZ_PYJW01000087.1 Protein Homology CDS 33231 33872 . - 0 ID=cds-WP_000610824.1;Parent=gene-C9E95_RS09045;Dbxref=GenBank:WP_000610824.1;Name=WP_000610824.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459342.1;locus_tag=C9E95_RS09045;product=helix-turn-helix transcriptional regulator;protein_id=WP_000610824.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 34016 34540 . - . ID=gene-C9E95_RS09050;Name=C9E95_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09050;old_locus_tag=C9E95_09280 NZ_PYJW01000087.1 Protein Homology CDS 34016 34540 . - 0 ID=cds-WP_000830237.1;Parent=gene-C9E95_RS09050;Dbxref=GenBank:WP_000830237.1;Name=WP_000830237.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459341.1;locus_tag=C9E95_RS09050;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_000830237.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 34941 35429 . - . ID=gene-C9E95_RS09055;Name=C9E95_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09055;old_locus_tag=C9E95_09285 NZ_PYJW01000087.1 Protein Homology CDS 34941 35429 . - 0 ID=cds-WP_000545426.1;Parent=gene-C9E95_RS09055;Dbxref=GenBank:WP_000545426.1;Name=WP_000545426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459340.1;locus_tag=C9E95_RS09055;product=hypothetical protein;protein_id=WP_000545426.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 35402 36145 . - . ID=gene-C9E95_RS09060;Name=C9E95_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09060;old_locus_tag=C9E95_09290 NZ_PYJW01000087.1 Protein Homology CDS 35402 36145 . - 0 ID=cds-WP_000081365.1;Parent=gene-C9E95_RS09060;Dbxref=GenBank:WP_000081365.1;Name=WP_000081365.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459339.1;locus_tag=C9E95_RS09060;product=transcriptional regulator;protein_id=WP_000081365.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 36245 37819 . - . ID=gene-C9E95_RS09065;Name=C9E95_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09065;old_locus_tag=C9E95_09295 NZ_PYJW01000087.1 Protein Homology CDS 36245 37819 . - 0 ID=cds-WP_080203931.1;Parent=gene-C9E95_RS09065;Dbxref=GenBank:WP_080203931.1;Name=WP_080203931.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459338.1;locus_tag=C9E95_RS09065;product=EAL domain-containing protein;protein_id=WP_080203931.1;transl_table=11 NZ_PYJW01000087.1 RefSeq pseudogene 38319 38619 . - . ID=gene-C9E95_RS09070;Name=C9E95_RS09070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS09070;old_locus_tag=C9E95_09305;pseudo=true NZ_PYJW01000087.1 Protein Homology CDS 38319 38619 . - 0 ID=cds-C9E95_RS09070;Parent=gene-C9E95_RS09070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459337.1;locus_tag=C9E95_RS09070;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 38592 39326 . - . ID=gene-C9E95_RS09075;Name=C9E95_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09075;old_locus_tag=C9E95_09310 NZ_PYJW01000087.1 Protein Homology CDS 38592 39326 . - 0 ID=cds-WP_139780576.1;Parent=gene-C9E95_RS09075;Dbxref=GenBank:WP_139780576.1;Name=WP_139780576.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005860.1;locus_tag=C9E95_RS09075;product=winged helix-turn-helix domain-containing protein;protein_id=WP_139780576.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 39988 40524 . + . ID=gene-C9E95_RS09080;Name=C9E95_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09080;old_locus_tag=C9E95_09315 NZ_PYJW01000087.1 Protein Homology CDS 39988 40524 . + 0 ID=cds-WP_000062035.1;Parent=gene-C9E95_RS09080;Dbxref=GenBank:WP_000062035.1;Name=WP_000062035.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459335.1;locus_tag=C9E95_RS09080;product=fimbrial protein;protein_id=WP_000062035.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 40586 41347 . + . ID=gene-C9E95_RS09085;Name=stbB;gbkey=Gene;gene=stbB;gene_biotype=protein_coding;locus_tag=C9E95_RS09085;old_locus_tag=C9E95_09320 NZ_PYJW01000087.1 Protein Homology CDS 40586 41347 . + 0 ID=cds-WP_080203929.1;Parent=gene-C9E95_RS09085;Dbxref=GenBank:WP_080203929.1;Name=WP_080203929.1;gbkey=CDS;gene=stbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459334.1;locus_tag=C9E95_RS09085;product=fimbrial biogenesis chaperone StbB;protein_id=WP_080203929.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 41331 43892 . + . ID=gene-C9E95_RS09090;Name=C9E95_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09090;old_locus_tag=C9E95_09325 NZ_PYJW01000087.1 Protein Homology CDS 41331 43892 . + 0 ID=cds-WP_080203928.1;Parent=gene-C9E95_RS09090;Dbxref=GenBank:WP_080203928.1;Name=WP_080203928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459333.1;locus_tag=C9E95_RS09090;product=fimbrial outer membrane usher protein;protein_id=WP_080203928.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 43897 45222 . + . ID=gene-C9E95_RS09095;Name=stbD;gbkey=Gene;gene=stbD;gene_biotype=protein_coding;locus_tag=C9E95_RS09095;old_locus_tag=C9E95_09330 NZ_PYJW01000087.1 Protein Homology CDS 43897 45222 . + 0 ID=cds-WP_023993801.1;Parent=gene-C9E95_RS09095;Dbxref=GenBank:WP_023993801.1;Name=WP_023993801.1;gbkey=CDS;gene=stbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=C9E95_RS09095;product=fimbrial usher protein StbD;protein_id=WP_023993801.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 45188 45946 . + . ID=gene-C9E95_RS09100;Name=stbE;gbkey=Gene;gene=stbE;gene_biotype=protein_coding;locus_tag=C9E95_RS09100;old_locus_tag=C9E95_09335 NZ_PYJW01000087.1 Protein Homology CDS 45188 45946 . + 0 ID=cds-WP_080203927.1;Parent=gene-C9E95_RS09100;Dbxref=GenBank:WP_080203927.1;Name=WP_080203927.1;gbkey=CDS;gene=stbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459331.1;locus_tag=C9E95_RS09100;product=fimbrial biogenesis chaperone StbE;protein_id=WP_080203927.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 45994 46392 . - . ID=gene-C9E95_RS09105;Name=C9E95_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09105;old_locus_tag=C9E95_09340 NZ_PYJW01000087.1 Protein Homology CDS 45994 46392 . - 0 ID=cds-WP_080203926.1;Parent=gene-C9E95_RS09105;Dbxref=GenBank:WP_080203926.1;Name=WP_080203926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459330.1;locus_tag=C9E95_RS09105;product=hypothetical protein;protein_id=WP_080203926.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 47083 47355 . + . ID=gene-C9E95_RS09110;Name=C9E95_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09110;old_locus_tag=C9E95_09345 NZ_PYJW01000087.1 Protein Homology CDS 47083 47355 . + 0 ID=cds-WP_001675688.1;Parent=gene-C9E95_RS09110;Dbxref=GenBank:WP_001675688.1;Name=WP_001675688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459329.1;locus_tag=C9E95_RS09110;product=hypothetical protein;protein_id=WP_001675688.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 47300 48265 . - . ID=gene-C9E95_RS09115;Name=C9E95_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09115;old_locus_tag=C9E95_09350 NZ_PYJW01000087.1 Protein Homology CDS 47300 48265 . - 0 ID=cds-WP_000859023.1;Parent=gene-C9E95_RS09115;Dbxref=GenBank:WP_000859023.1;Name=WP_000859023.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459328.1;locus_tag=C9E95_RS09115;product=LysR family transcriptional regulator;protein_id=WP_000859023.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 48299 49213 . - . ID=gene-C9E95_RS09120;Name=C9E95_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09120;old_locus_tag=C9E95_09355 NZ_PYJW01000087.1 Protein Homology CDS 48299 49213 . - 0 ID=cds-WP_000105592.1;Parent=gene-C9E95_RS09120;Dbxref=GenBank:WP_000105592.1;Name=WP_000105592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459327.1;locus_tag=C9E95_RS09120;product=alpha/beta fold hydrolase;protein_id=WP_000105592.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 49213 50091 . - . ID=gene-C9E95_RS09125;Name=C9E95_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09125;old_locus_tag=C9E95_09360 NZ_PYJW01000087.1 Protein Homology CDS 49213 50091 . - 0 ID=cds-WP_000780212.1;Parent=gene-C9E95_RS09125;Dbxref=GenBank:WP_000780212.1;Name=WP_000780212.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459326.1;locus_tag=C9E95_RS09125;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000780212.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 50106 50732 . - . ID=gene-C9E95_RS09130;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=C9E95_RS09130;old_locus_tag=C9E95_09365 NZ_PYJW01000087.1 Protein Homology CDS 50106 50732 . - 0 ID=cds-WP_024792437.1;Parent=gene-C9E95_RS09130;Dbxref=GenBank:WP_024792437.1;Name=WP_024792437.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459325.1;locus_tag=C9E95_RS09130;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_024792437.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 50734 52155 . - . ID=gene-C9E95_RS09135;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=C9E95_RS09135;old_locus_tag=C9E95_09370 NZ_PYJW01000087.1 Protein Homology CDS 50734 52155 . - 0 ID=cds-WP_039591221.1;Parent=gene-C9E95_RS09135;Dbxref=GenBank:WP_039591221.1;Name=WP_039591221.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459324.1;locus_tag=C9E95_RS09135;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_039591221.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 52287 53525 . - . ID=gene-C9E95_RS09140;Name=C9E95_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09140;old_locus_tag=C9E95_09375 NZ_PYJW01000087.1 Protein Homology CDS 52287 53525 . - 0 ID=cds-WP_012543325.1;Parent=gene-C9E95_RS09140;Dbxref=GenBank:WP_012543325.1;Name=WP_012543325.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459323.3;locus_tag=C9E95_RS09140;product=MFS transporter;protein_id=WP_012543325.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 53867 54190 . - . ID=gene-C9E95_RS09145;Name=C9E95_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09145;old_locus_tag=C9E95_09380 NZ_PYJW01000087.1 Protein Homology CDS 53867 54190 . - 0 ID=cds-WP_001573898.1;Parent=gene-C9E95_RS09145;Dbxref=GenBank:WP_001573898.1;Name=WP_001573898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459322.1;locus_tag=C9E95_RS09145;product=DUF1889 family protein;protein_id=WP_001573898.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 54300 54428 . - . ID=gene-C9E95_RS23720;Name=C9E95_RS23720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23720;old_locus_tag=C9E95_09385 NZ_PYJW01000087.1 Protein Homology CDS 54300 54428 . - 0 ID=cds-WP_077221214.1;Parent=gene-C9E95_RS23720;Dbxref=GenBank:WP_077221214.1;Name=WP_077221214.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020417.6;locus_tag=C9E95_RS23720;product=diol dehydratase reactivase ATPase-like domain-containing protein;protein_id=WP_077221214.1;transl_table=11 NZ_PYJW01000087.1 RefSeq pseudogene 54376 54741 . - . ID=gene-C9E95_RS09155;Name=C9E95_RS09155;end_range=54741,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS09155;old_locus_tag=C9E95_09390;partial=true;pseudo=true;start_range=.,54376 NZ_PYJW01000087.1 Protein Homology CDS 54376 54741 . - 0 ID=cds-C9E95_RS09155;Parent=gene-C9E95_RS09155;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=54741,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228916.1;locus_tag=C9E95_RS09155;partial=true;product=diol dehydratase reactivase ATPase-like domain-containing protein;pseudo=true;start_range=.,54376;transl_table=11 NZ_PYJW01000087.1 RefSeq pseudogene 54833 55126 . + . ID=gene-C9E95_RS09160;Name=C9E95_RS09160;end_range=55126,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS09160;old_locus_tag=C9E95_09395;partial=true;pseudo=true;start_range=.,54833 NZ_PYJW01000087.1 Protein Homology CDS 54833 55126 . + 0 ID=cds-C9E95_RS09160;Parent=gene-C9E95_RS09160;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=55126,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=C9E95_RS09160;partial=true;product=hypothetical protein;pseudo=true;start_range=.,54833;transl_table=11 NZ_PYJW01000087.1 RefSeq pseudogene 55040 55264 . - . ID=gene-C9E95_RS09165;Name=C9E95_RS09165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS09165;old_locus_tag=C9E95_09400;partial=true;pseudo=true;start_range=.,55040 NZ_PYJW01000087.1 Protein Homology CDS 55040 55264 . - 0 ID=cds-C9E95_RS09165;Parent=gene-C9E95_RS09165;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225313.1;locus_tag=C9E95_RS09165;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;start_range=.,55040;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 55428 55503 . - . ID=gene-C9E95_RS09170;Name=C9E95_RS09170;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS09170;old_locus_tag=C9E95_09405 NZ_PYJW01000087.1 tRNAscan-SE tRNA 55428 55503 . - . ID=rna-C9E95_RS09170;Parent=gene-C9E95_RS09170;anticodon=(pos:complement(55468..55470));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS09170;product=tRNA-Thr NZ_PYJW01000087.1 tRNAscan-SE exon 55428 55503 . - . ID=exon-C9E95_RS09170-1;Parent=rna-C9E95_RS09170;anticodon=(pos:complement(55468..55470));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS09170;product=tRNA-Thr NZ_PYJW01000087.1 RefSeq gene 55619 56866 . - . ID=gene-C9E95_RS09175;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=C9E95_RS09175;old_locus_tag=C9E95_09410 NZ_PYJW01000087.1 Protein Homology CDS 55619 56866 . - 0 ID=cds-WP_080203925.1;Parent=gene-C9E95_RS09175;Dbxref=GenBank:WP_080203925.1;Name=WP_080203925.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459319.1;locus_tag=C9E95_RS09175;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_080203925.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 56878 57981 . - . ID=gene-C9E95_RS09180;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=C9E95_RS09180;old_locus_tag=C9E95_09415 NZ_PYJW01000087.1 Protein Homology CDS 56878 57981 . - 0 ID=cds-WP_001285275.1;Parent=gene-C9E95_RS09180;Dbxref=GenBank:WP_001285275.1;Name=WP_001285275.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459318.1;locus_tag=C9E95_RS09180;product=glutamate 5-kinase;protein_id=WP_001285275.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 58264 59316 . + . ID=gene-C9E95_RS09185;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=C9E95_RS09185;old_locus_tag=C9E95_09420 NZ_PYJW01000087.1 Protein Homology CDS 58264 59316 . + 0 ID=cds-WP_001043667.1;Parent=gene-C9E95_RS09185;Dbxref=GenBank:WP_001043667.1;Name=WP_001043667.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459317.1;locus_tag=C9E95_RS09185;product=phosphoporin PhoE;protein_id=WP_001043667.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 59367 59768 . - . ID=gene-C9E95_RS09190;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=C9E95_RS09190;old_locus_tag=C9E95_09425 NZ_PYJW01000087.1 Protein Homology CDS 59367 59768 . - 0 ID=cds-WP_023254786.1;Parent=gene-C9E95_RS09190;Dbxref=GenBank:WP_023254786.1;Name=WP_023254786.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459316.1;locus_tag=C9E95_RS09190;product=sigma factor-binding protein Crl;protein_id=WP_023254786.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 59826 61070 . - . ID=gene-C9E95_RS09195;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=C9E95_RS09195;old_locus_tag=C9E95_09430 NZ_PYJW01000087.1 Protein Homology CDS 59826 61070 . - 0 ID=cds-WP_135369836.1;Parent=gene-C9E95_RS09195;Dbxref=GenBank:WP_135369836.1;Name=WP_135369836.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459315.1;locus_tag=C9E95_RS09195;product=esterase FrsA;protein_id=WP_135369836.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 61159 61617 . - . ID=gene-C9E95_RS09200;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=C9E95_RS09200;old_locus_tag=C9E95_09435 NZ_PYJW01000087.1 Protein Homology CDS 61159 61617 . - 0 ID=cds-WP_001292018.1;Parent=gene-C9E95_RS09200;Dbxref=GenBank:WP_001292018.1;Name=WP_001292018.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459314.1;locus_tag=C9E95_RS09200;product=xanthine phosphoribosyltransferase;protein_id=WP_001292018.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 61866 63323 . + . ID=gene-C9E95_RS09205;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=C9E95_RS09205;old_locus_tag=C9E95_09440 NZ_PYJW01000087.1 Protein Homology CDS 61866 63323 . + 0 ID=cds-WP_001292977.1;Parent=gene-C9E95_RS09205;Dbxref=GenBank:WP_001292977.1;Name=WP_001292977.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=C9E95_RS09205;product=cytosol nonspecific dipeptidase;protein_id=WP_001292977.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 63479 64093 . - . ID=gene-C9E95_RS09210;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=protein_coding;locus_tag=C9E95_RS09210;old_locus_tag=C9E95_09445 NZ_PYJW01000087.1 Protein Homology CDS 63479 64093 . - 0 ID=cds-WP_000602086.1;Parent=gene-C9E95_RS09210;Dbxref=GenBank:WP_000602086.1;Name=WP_000602086.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459312.1;locus_tag=C9E95_RS09210;product=peptide chain release factor H;protein_id=WP_000602086.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 64090 65229 . - . ID=gene-C9E95_RS09215;Name=C9E95_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09215;old_locus_tag=C9E95_09450 NZ_PYJW01000087.1 Protein Homology CDS 64090 65229 . - 0 ID=cds-WP_000528902.1;Parent=gene-C9E95_RS09215;Dbxref=GenBank:WP_000528902.1;Name=WP_000528902.1;Ontology_term=GO:0006415;gbkey=CDS;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006895405.1;locus_tag=C9E95_RS09215;product=RNA ligase RtcB family protein;protein_id=WP_000528902.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 65448 66503 . - . ID=gene-C9E95_RS09220;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=C9E95_RS09220;old_locus_tag=C9E95_09455 NZ_PYJW01000087.1 Protein Homology CDS 65448 66503 . - 0 ID=cds-WP_001226204.1;Parent=gene-C9E95_RS09220;Dbxref=GenBank:WP_001226204.1;Name=WP_001226204.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459311.1;locus_tag=C9E95_RS09220;product=DNA polymerase IV;protein_id=WP_001226204.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 66753 67493 . + . ID=gene-C9E95_RS09225;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=C9E95_RS09225;old_locus_tag=C9E95_09460 NZ_PYJW01000087.1 Protein Homology CDS 66753 67493 . + 0 ID=cds-WP_001225658.1;Parent=gene-C9E95_RS09225;Dbxref=GenBank:WP_001225658.1;Name=WP_001225658.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459310.1;locus_tag=C9E95_RS09225;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_001225658.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 67464 68231 . - . ID=gene-C9E95_RS09230;Name=C9E95_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09230;old_locus_tag=C9E95_09465 NZ_PYJW01000087.1 Protein Homology CDS 67464 68231 . - 0 ID=cds-WP_000333387.1;Parent=gene-C9E95_RS09230;Dbxref=GenBank:WP_000333387.1;Name=WP_000333387.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459309.1;locus_tag=C9E95_RS09230;product=class II glutamine amidotransferase;protein_id=WP_000333387.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 68444 69022 . - . ID=gene-C9E95_RS09235;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=C9E95_RS09235;old_locus_tag=C9E95_09470 NZ_PYJW01000087.1 Protein Homology CDS 68444 69022 . - 0 ID=cds-WP_000284051.1;Parent=gene-C9E95_RS09235;Dbxref=GenBank:WP_000284051.1;Name=WP_000284051.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459308.1;locus_tag=C9E95_RS09235;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_000284051.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 69262 71706 . + . ID=gene-C9E95_RS09240;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=C9E95_RS09240;old_locus_tag=C9E95_09475 NZ_PYJW01000087.1 Protein Homology CDS 69262 71706 . + 0 ID=cds-WP_000973041.1;Parent=gene-C9E95_RS09240;Dbxref=GenBank:WP_000973041.1;Name=WP_000973041.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=C9E95_RS09240;product=acyl-CoA dehydrogenase FadE;protein_id=WP_000973041.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 71815 72582 . + . ID=gene-C9E95_RS09245;Name=C9E95_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09245;old_locus_tag=C9E95_09480 NZ_PYJW01000087.1 Protein Homology CDS 71815 72582 . + 0 ID=cds-WP_023993808.1;Parent=gene-C9E95_RS09245;Dbxref=GenBank:WP_023993808.1;Name=WP_023993808.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459306.1;locus_tag=C9E95_RS09245;product=amidohydrolase;protein_id=WP_023993808.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 72892 73299 . + . ID=gene-C9E95_RS09255;Name=C9E95_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09255;old_locus_tag=C9E95_09485 NZ_PYJW01000087.1 Protein Homology CDS 72892 73299 . + 0 ID=cds-WP_000788200.1;Parent=gene-C9E95_RS09255;Dbxref=GenBank:WP_000788200.1;Name=WP_000788200.1;Ontology_term=GO:0061077,GO:0044183,GO:0051082;gbkey=CDS;go_function=protein folding chaperone|0044183||IEA,unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459305.1;locus_tag=C9E95_RS09255;product=Spy/CpxP family protein refolding chaperone;protein_id=WP_000788200.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 73630 74349 . + . ID=gene-C9E95_RS09260;Name=pagN;gbkey=Gene;gene=pagN;gene_biotype=protein_coding;locus_tag=C9E95_RS09260;old_locus_tag=C9E95_09490 NZ_PYJW01000087.1 Protein Homology CDS 73630 74349 . + 0 ID=cds-WP_000787601.1;Parent=gene-C9E95_RS09260;Dbxref=GenBank:WP_000787601.1;Name=WP_000787601.1;gbkey=CDS;gene=pagN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459304.1;locus_tag=C9E95_RS09260;product=adhesin/invasin protein PagN;protein_id=WP_000787601.1;transl_table=11 NZ_PYJW01000087.1 RefSeq gene 74353 74541 . - . ID=gene-C9E95_RS09265;Name=C9E95_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09265;old_locus_tag=C9E95_09495 NZ_PYJW01000087.1 Protein Homology CDS 74353 74541 . - 0 ID=cds-WP_031603649.1;Parent=gene-C9E95_RS09265;Dbxref=GenBank:WP_031603649.1;Name=WP_031603649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543323.1;locus_tag=C9E95_RS09265;product=hypothetical protein;protein_id=WP_031603649.1;transl_table=11 NZ_PYJW01000087.1 RefSeq pseudogene 74598 74710 . + . ID=gene-C9E95_RS23270;Name=C9E95_RS23270;end_range=74710,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23270;partial=true;pseudo=true;start_range=.,74598 NZ_PYJW01000087.1 Protein Homology CDS 74598 74710 . + 0 ID=cds-C9E95_RS23270;Parent=gene-C9E95_RS23270;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=74710,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=C9E95_RS23270;partial=true;product=hypothetical protein;pseudo=true;start_range=.,74598;transl_table=11 ##sequence-region NZ_PYJW01000183.1 1 1312 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000183.1 RefSeq region 1 1312 . + . ID=NZ_PYJW01000183.1:1..1312;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000183.1 RefSeq gene 4 1259 . - . ID=gene-C9E95_RS21705;Name=C9E95_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21705;old_locus_tag=C9E95_22235 NZ_PYJW01000183.1 Protein Homology CDS 908 1259 . - 0 ID=cds-WP_135369888.1;Parent=gene-C9E95_RS21705;Dbxref=GenBank:WP_135369888.1;Name=WP_135369888.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=C9E95_RS21705;product=IS3-like element ISSen1 family transposase;protein_id=WP_135369888.1;transl_table=11 NZ_PYJW01000183.1 Protein Homology CDS 4 908 . - 2 ID=cds-WP_135369888.1;Parent=gene-C9E95_RS21705;Dbxref=GenBank:WP_135369888.1;Name=WP_135369888.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=C9E95_RS21705;product=IS3-like element ISSen1 family transposase;protein_id=WP_135369888.1;transl_table=11 ##sequence-region NZ_PYJW01000177.1 1 72594 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000177.1 RefSeq region 1 72594 . + . ID=NZ_PYJW01000177.1:1..72594;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000177.1 RefSeq gene 153 1550 . + . ID=gene-C9E95_RS20750;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=C9E95_RS20750;old_locus_tag=C9E95_21245 NZ_PYJW01000177.1 Protein Homology CDS 153 1550 . + 0 ID=cds-WP_000404876.1;Parent=gene-C9E95_RS20750;Dbxref=GenBank:WP_000404876.1;Name=WP_000404876.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=C9E95_RS20750;product=PTS ascorbate transporter subunit IIC;protein_id=WP_000404876.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 1566 1871 . + . ID=gene-C9E95_RS20755;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=C9E95_RS20755;old_locus_tag=C9E95_21250 NZ_PYJW01000177.1 Protein Homology CDS 1566 1871 . + 0 ID=cds-WP_000218362.1;Parent=gene-C9E95_RS20755;Dbxref=GenBank:WP_000218362.1;Name=WP_000218362.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313197.1;locus_tag=C9E95_RS20755;product=PTS ascorbate transporter subunit IIB;protein_id=WP_000218362.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 1881 2345 . + . ID=gene-C9E95_RS20760;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=C9E95_RS20760;old_locus_tag=C9E95_21255 NZ_PYJW01000177.1 Protein Homology CDS 1881 2345 . + 0 ID=cds-WP_000776531.1;Parent=gene-C9E95_RS20760;Dbxref=GenBank:WP_000776531.1;Name=WP_000776531.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463246.1;locus_tag=C9E95_RS20760;product=PTS ascorbate transporter subunit IIA;protein_id=WP_000776531.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 2359 3009 . + . ID=gene-C9E95_RS20765;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=C9E95_RS20765;old_locus_tag=C9E95_21260 NZ_PYJW01000177.1 Protein Homology CDS 2359 3009 . + 0 ID=cds-WP_000056761.1;Parent=gene-C9E95_RS20765;Dbxref=GenBank:WP_000056761.1;Name=WP_000056761.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463247.1;locus_tag=C9E95_RS20765;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000056761.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 3019 3873 . + . ID=gene-C9E95_RS20770;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=C9E95_RS20770;old_locus_tag=C9E95_21265 NZ_PYJW01000177.1 Protein Homology CDS 3019 3873 . + 0 ID=cds-WP_000949531.1;Parent=gene-C9E95_RS20770;Dbxref=GenBank:WP_000949531.1;Name=WP_000949531.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463248.1;locus_tag=C9E95_RS20770;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WP_000949531.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 3873 4559 . + . ID=gene-C9E95_RS20775;Name=C9E95_RS20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20775;old_locus_tag=C9E95_21270 NZ_PYJW01000177.1 Protein Homology CDS 3873 4559 . + 0 ID=cds-WP_001170771.1;Parent=gene-C9E95_RS20775;Dbxref=GenBank:WP_001170771.1;Name=WP_001170771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463249.1;locus_tag=C9E95_RS20775;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_001170771.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 4688 4963 . - . ID=gene-C9E95_RS20780;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=C9E95_RS20780;old_locus_tag=C9E95_21275 NZ_PYJW01000177.1 Protein Homology CDS 4688 4963 . - 0 ID=cds-WP_001529484.1;Parent=gene-C9E95_RS20780;Dbxref=GenBank:WP_001529484.1;Name=WP_001529484.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463250.1;locus_tag=C9E95_RS20780;product=DUF1471 family protein YjfY;protein_id=WP_001529484.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 5157 5363 . + . ID=gene-C9E95_RS20790;Name=C9E95_RS20790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20790;old_locus_tag=C9E95_21285 NZ_PYJW01000177.1 Protein Homology CDS 5157 5363 . + 0 ID=cds-WP_001541376.1;Parent=gene-C9E95_RS20790;Dbxref=GenBank:WP_001541376.1;Name=WP_001541376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463251.1;locus_tag=C9E95_RS20790;product=hypothetical protein;protein_id=WP_001541376.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 5434 5829 . + . ID=gene-C9E95_RS20795;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=C9E95_RS20795;old_locus_tag=C9E95_21290 NZ_PYJW01000177.1 Protein Homology CDS 5434 5829 . + 0 ID=cds-WP_001216673.1;Parent=gene-C9E95_RS20795;Dbxref=GenBank:WP_001216673.1;Name=WP_001216673.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=C9E95_RS20795;product=30S ribosomal protein S6;protein_id=WP_001216673.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 5836 6150 . + . ID=gene-C9E95_RS20800;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=C9E95_RS20800;old_locus_tag=C9E95_21295 NZ_PYJW01000177.1 Protein Homology CDS 5836 6150 . + 0 ID=cds-WP_001519453.1;Parent=gene-C9E95_RS20800;Dbxref=GenBank:WP_001519453.1;Name=WP_001519453.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463253.1;locus_tag=C9E95_RS20800;product=primosomal replication protein N;protein_id=WP_001519453.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 6155 6382 . + . ID=gene-C9E95_RS20805;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=C9E95_RS20805;old_locus_tag=C9E95_21300 NZ_PYJW01000177.1 Protein Homology CDS 6155 6382 . + 0 ID=cds-WP_000135199.1;Parent=gene-C9E95_RS20805;Dbxref=GenBank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=C9E95_RS20805;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 6424 6873 . + . ID=gene-C9E95_RS20810;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=C9E95_RS20810;old_locus_tag=C9E95_21305 NZ_PYJW01000177.1 Protein Homology CDS 6424 6873 . + 0 ID=cds-WP_001196059.1;Parent=gene-C9E95_RS20810;Dbxref=GenBank:WP_001196059.1;Name=WP_001196059.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=C9E95_RS20810;product=50S ribosomal protein L9;protein_id=WP_001196059.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 7021 7947 . + . ID=gene-C9E95_RS20815;Name=C9E95_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20815;old_locus_tag=C9E95_21310 NZ_PYJW01000177.1 Protein Homology CDS 7021 7947 . + 0 ID=cds-WP_000381066.1;Parent=gene-C9E95_RS20815;Dbxref=GenBank:WP_000381066.1;Name=WP_000381066.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463256.1;locus_tag=C9E95_RS20815;product=DMT family transporter;protein_id=WP_000381066.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 7997 8632 . - . ID=gene-C9E95_RS20820;Name=C9E95_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20820;old_locus_tag=C9E95_21315 NZ_PYJW01000177.1 Protein Homology CDS 7997 8632 . - 0 ID=cds-WP_001119448.1;Parent=gene-C9E95_RS20820;Dbxref=GenBank:WP_001119448.1;Name=WP_001119448.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463257.1;locus_tag=C9E95_RS20820;product=OapA family protein;protein_id=WP_001119448.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 8852 9472 . + . ID=gene-C9E95_RS20825;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=C9E95_RS20825;old_locus_tag=C9E95_21325 NZ_PYJW01000177.1 Protein Homology CDS 8852 9472 . + 0 ID=cds-WP_000235161.1;Parent=gene-C9E95_RS20825;Dbxref=GenBank:WP_000235161.1;Name=WP_000235161.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=C9E95_RS20825;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000235161.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 9768 11177 . + . ID=gene-C9E95_RS20830;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=C9E95_RS20830;old_locus_tag=C9E95_21330 NZ_PYJW01000177.1 Protein Homology CDS 9768 11177 . + 0 ID=cds-WP_000228322.1;Parent=gene-C9E95_RS20830;Dbxref=GenBank:WP_000228322.1;Name=WP_000228322.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463259.1;locus_tag=C9E95_RS20830;product=D-serine/D-alanine/glycine transporter;protein_id=WP_000228322.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 11289 11951 . - . ID=gene-C9E95_RS20835;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=C9E95_RS20835;old_locus_tag=C9E95_21335 NZ_PYJW01000177.1 Protein Homology CDS 11289 11951 . - 0 ID=cds-WP_000331476.1;Parent=gene-C9E95_RS20835;Dbxref=GenBank:WP_000331476.1;Name=WP_000331476.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463260.1;locus_tag=C9E95_RS20835;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_000331476.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 12054 13019 . - . ID=gene-C9E95_RS20840;Name=C9E95_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20840;old_locus_tag=C9E95_21340 NZ_PYJW01000177.1 Protein Homology CDS 12054 13019 . - 0 ID=cds-WP_080219666.1;Parent=gene-C9E95_RS20840;Dbxref=GenBank:WP_080219666.1;Name=WP_080219666.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463261.1;locus_tag=C9E95_RS20840;product=DMT family transporter;protein_id=WP_080219666.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 13100 13948 . - . ID=gene-C9E95_RS20845;Name=C9E95_RS20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20845;old_locus_tag=C9E95_21345 NZ_PYJW01000177.1 Protein Homology CDS 13100 13948 . - 0 ID=cds-WP_080194301.1;Parent=gene-C9E95_RS20845;Dbxref=GenBank:WP_080194301.1;Name=WP_080194301.1;Ontology_term=GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463262.1;locus_tag=C9E95_RS20845;product=SDR family oxidoreductase;protein_id=WP_080194301.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 14036 14422 . + . ID=gene-C9E95_RS20850;Name=C9E95_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20850;old_locus_tag=C9E95_21350 NZ_PYJW01000177.1 Protein Homology CDS 14036 14422 . + 0 ID=cds-WP_001201296.1;Parent=gene-C9E95_RS20850;Dbxref=GenBank:WP_001201296.1;Name=WP_001201296.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463263.1;locus_tag=C9E95_RS20850;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_001201296.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 14480 16423 . - . ID=gene-C9E95_RS20855;Name=C9E95_RS20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20855;old_locus_tag=C9E95_21355 NZ_PYJW01000177.1 Protein Homology CDS 14480 16423 . - 0 ID=cds-WP_080194300.1;Parent=gene-C9E95_RS20855;Dbxref=GenBank:WP_080194300.1;Name=WP_080194300.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463264.1;locus_tag=C9E95_RS20855;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_080194300.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 16691 17431 . + . ID=gene-C9E95_RS20865;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=C9E95_RS20865;old_locus_tag=C9E95_21365 NZ_PYJW01000177.1 Protein Homology CDS 16691 17431 . + 0 ID=cds-WP_000893398.1;Parent=gene-C9E95_RS20865;Dbxref=GenBank:WP_000893398.1;Name=WP_000893398.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=C9E95_RS20865;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000893398.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 17421 17978 . - . ID=gene-C9E95_RS20870;Name=C9E95_RS20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20870;old_locus_tag=C9E95_21370 NZ_PYJW01000177.1 Protein Homology CDS 17421 17978 . - 0 ID=cds-WP_023250336.1;Parent=gene-C9E95_RS20870;Dbxref=GenBank:WP_023250336.1;Name=WP_023250336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463266.1;locus_tag=C9E95_RS20870;product=YtfJ family protein;protein_id=WP_023250336.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 18305 18511 . + . ID=gene-C9E95_RS20880;Name=C9E95_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20880;old_locus_tag=C9E95_21380 NZ_PYJW01000177.1 Protein Homology CDS 18305 18511 . + 0 ID=cds-WP_000689229.1;Parent=gene-C9E95_RS20880;Dbxref=GenBank:WP_000689229.1;Name=WP_000689229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=C9E95_RS20880;product=DUF1107 domain-containing protein;protein_id=WP_000689229.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 18596 19939 . - . ID=gene-C9E95_RS20885;Name=C9E95_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20885;old_locus_tag=C9E95_21385 NZ_PYJW01000177.1 Protein Homology CDS 18596 19939 . - 0 ID=cds-WP_080203664.1;Parent=gene-C9E95_RS20885;Dbxref=GenBank:WP_080203664.1;Name=WP_080203664.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463268.1;locus_tag=C9E95_RS20885;product=hemolysin family protein;protein_id=WP_080203664.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 20122 20760 . - . ID=gene-C9E95_RS20890;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=C9E95_RS20890;old_locus_tag=C9E95_21390 NZ_PYJW01000177.1 Protein Homology CDS 20122 20760 . - 0 ID=cds-WP_000051472.1;Parent=gene-C9E95_RS20890;Dbxref=GenBank:WP_000051472.1;Name=WP_000051472.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463269.1;locus_tag=C9E95_RS20890;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_000051472.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 20973 22706 . + . ID=gene-C9E95_RS20895;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=C9E95_RS20895;old_locus_tag=C9E95_21395 NZ_PYJW01000177.1 Protein Homology CDS 20973 22706 . + 0 ID=cds-WP_001120235.1;Parent=gene-C9E95_RS20895;Dbxref=GenBank:WP_001120235.1;Name=WP_001120235.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463270.1;locus_tag=C9E95_RS20895;product=autotransporter assembly complex protein TamA;protein_id=WP_001120235.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 22703 26482 . + . ID=gene-C9E95_RS20900;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=C9E95_RS20900;old_locus_tag=C9E95_21400 NZ_PYJW01000177.1 Protein Homology CDS 22703 26482 . + 0 ID=cds-WP_080203665.1;Parent=gene-C9E95_RS20900;Dbxref=GenBank:WP_080203665.1;Name=WP_080203665.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=C9E95_RS20900;product=autotransporter assembly complex protein TamB;protein_id=WP_080203665.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 26485 26829 . + . ID=gene-C9E95_RS20905;Name=C9E95_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20905;old_locus_tag=C9E95_21405 NZ_PYJW01000177.1 Protein Homology CDS 26485 26829 . + 0 ID=cds-WP_001219167.1;Parent=gene-C9E95_RS20905;Dbxref=GenBank:WP_001219167.1;Name=WP_001219167.1;Ontology_term=GO:0061929;gbkey=CDS;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463272.1;locus_tag=C9E95_RS20905;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_001219167.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 26883 28091 . - . ID=gene-C9E95_RS20910;Name=C9E95_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20910;old_locus_tag=C9E95_21410 NZ_PYJW01000177.1 Protein Homology CDS 26883 28091 . - 0 ID=cds-WP_000203131.1;Parent=gene-C9E95_RS20910;Dbxref=GenBank:WP_000203131.1;Name=WP_000203131.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463273.1;locus_tag=C9E95_RS20910;product=MFS transporter;protein_id=WP_000203131.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 28088 29251 . - . ID=gene-C9E95_RS20915;Name=C9E95_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20915;old_locus_tag=C9E95_21415 NZ_PYJW01000177.1 Protein Homology CDS 28088 29251 . - 0 ID=cds-WP_000977207.1;Parent=gene-C9E95_RS20915;Dbxref=GenBank:WP_000977207.1;Name=WP_000977207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463274.1;locus_tag=C9E95_RS20915;product=metallo-dependent hydrolase;protein_id=WP_000977207.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 29661 30191 . - . ID=gene-C9E95_RS20920;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=C9E95_RS20920;old_locus_tag=C9E95_21420 NZ_PYJW01000177.1 Protein Homology CDS 29661 30191 . - 0 ID=cds-WP_000055079.1;Parent=gene-C9E95_RS20920;Dbxref=GenBank:WP_000055079.1;Name=WP_000055079.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=C9E95_RS20920;product=inorganic diphosphatase;protein_id=WP_000055079.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 30418 31416 . - . ID=gene-C9E95_RS20925;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=C9E95_RS20925;old_locus_tag=C9E95_21425 NZ_PYJW01000177.1 Protein Homology CDS 30418 31416 . - 0 ID=cds-WP_000853764.1;Parent=gene-C9E95_RS20925;Dbxref=GenBank:WP_000853764.1;Name=WP_000853764.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=C9E95_RS20925;product=class 1 fructose-bisphosphatase;protein_id=WP_000853764.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 31591 32970 . + . ID=gene-C9E95_RS20930;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=C9E95_RS20930;old_locus_tag=C9E95_21430 NZ_PYJW01000177.1 Protein Homology CDS 31591 32970 . + 0 ID=cds-WP_058107302.1;Parent=gene-C9E95_RS20930;Dbxref=GenBank:WP_058107302.1;Name=WP_058107302.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463277.1;locus_tag=C9E95_RS20930;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_058107302.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 33461 34294 . + . ID=gene-C9E95_RS20940;Name=iolR;gbkey=Gene;gene=iolR;gene_biotype=protein_coding;locus_tag=C9E95_RS20940;old_locus_tag=C9E95_21440 NZ_PYJW01000177.1 Protein Homology CDS 33461 34294 . + 0 ID=cds-WP_000033840.1;Parent=gene-C9E95_RS20940;Dbxref=GenBank:WP_000033840.1;Name=WP_000033840.1;gbkey=CDS;gene=iolR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463278.1;locus_tag=C9E95_RS20940;product=myo-inositol utilization transcriptional regulator IolR;protein_id=WP_000033840.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 34345 35778 . - . ID=gene-C9E95_RS20945;Name=iolT1;gbkey=Gene;gene=iolT1;gene_biotype=protein_coding;locus_tag=C9E95_RS20945;old_locus_tag=C9E95_21445 NZ_PYJW01000177.1 Protein Homology CDS 34345 35778 . - 0 ID=cds-WP_000107709.1;Parent=gene-C9E95_RS20945;Dbxref=GenBank:WP_000107709.1;Name=WP_000107709.1;gbkey=CDS;gene=iolT1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463279.1;locus_tag=C9E95_RS20945;product=myo-inositol import MFS transporter IolT1;protein_id=WP_000107709.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 36006 36200 . - . ID=gene-C9E95_RS20950;Name=C9E95_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20950;old_locus_tag=C9E95_21450 NZ_PYJW01000177.1 GeneMarkS-2+ CDS 36006 36200 . - 0 ID=cds-WP_023994381.1;Parent=gene-C9E95_RS20950;Dbxref=GenBank:WP_023994381.1;Name=WP_023994381.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS20950;product=hypothetical protein;protein_id=WP_023994381.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 36237 37673 . + . ID=gene-C9E95_RS20955;Name=iolT2;gbkey=Gene;gene=iolT2;gene_biotype=protein_coding;locus_tag=C9E95_RS20955;old_locus_tag=C9E95_21455 NZ_PYJW01000177.1 Protein Homology CDS 36237 37673 . + 0 ID=cds-WP_023993516.1;Parent=gene-C9E95_RS20955;Dbxref=GenBank:WP_023993516.1;Name=WP_023993516.1;gbkey=CDS;gene=iolT2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463280.1;locus_tag=C9E95_RS20955;product=myo-inositol import MFS transporter IolT2;protein_id=WP_023993516.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 38086 38544 . - . ID=gene-C9E95_RS20965;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=C9E95_RS20965;old_locus_tag=C9E95_21465 NZ_PYJW01000177.1 Protein Homology CDS 38086 38544 . - 0 ID=cds-WP_000502120.1;Parent=gene-C9E95_RS20965;Dbxref=GenBank:WP_000502120.1;Name=WP_000502120.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=C9E95_RS20965;product=IS200/IS605-like element IS200F family transposase;protein_id=WP_000502120.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 38783 38872 . - . ID=gene-C9E95_RS20975;Name=C9E95_RS20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20975;old_locus_tag=C9E95_21475 NZ_PYJW01000177.1 Protein Homology CDS 38783 38872 . - 0 ID=cds-WP_135369882.1;Parent=gene-C9E95_RS20975;Dbxref=GenBank:WP_135369882.1;Name=WP_135369882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=C9E95_RS20975;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_135369882.1;transl_table=11 NZ_PYJW01000177.1 RefSeq pseudogene 39245 39397 . + . ID=gene-C9E95_RS23585;Name=C9E95_RS23585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23585;partial=true;pseudo=true;start_range=.,39245 NZ_PYJW01000177.1 Protein Homology CDS 39245 39397 . + 0 ID=cds-C9E95_RS23585;Parent=gene-C9E95_RS23585;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: protein motif:HMM:NF013237.6;locus_tag=C9E95_RS23585;partial=true;product=PLP-dependent transferase;pseudo=true;start_range=.,39245;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 39515 40813 . + . ID=gene-C9E95_RS20985;Name=C9E95_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20985;old_locus_tag=C9E95_21485 NZ_PYJW01000177.1 Protein Homology CDS 39515 40813 . + 0 ID=cds-WP_001150169.1;Parent=gene-C9E95_RS20985;Dbxref=GenBank:WP_001150169.1;Name=WP_001150169.1;Ontology_term=GO:0003333;gbkey=CDS;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462527.1;locus_tag=C9E95_RS20985;product=aromatic amino acid transport family protein;protein_id=WP_001150169.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 40914 41927 . - . ID=gene-C9E95_RS20990;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=C9E95_RS20990;old_locus_tag=C9E95_21490 NZ_PYJW01000177.1 Protein Homology CDS 40914 41927 . - 0 ID=cds-WP_000103563.1;Parent=gene-C9E95_RS20990;Dbxref=GenBank:WP_000103563.1;Name=WP_000103563.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462528.1;locus_tag=C9E95_RS20990;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_000103563.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 41924 42907 . - . ID=gene-C9E95_RS20995;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=C9E95_RS20995;old_locus_tag=C9E95_21495 NZ_PYJW01000177.1 Protein Homology CDS 41924 42907 . - 0 ID=cds-WP_001196509.1;Parent=gene-C9E95_RS20995;Dbxref=GenBank:WP_001196509.1;Name=WP_001196509.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462529.1;locus_tag=C9E95_RS20995;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_001196509.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 42918 43820 . - . ID=gene-C9E95_RS21000;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=C9E95_RS21000;old_locus_tag=C9E95_21500 NZ_PYJW01000177.1 Protein Homology CDS 42918 43820 . - 0 ID=cds-WP_000084690.1;Parent=gene-C9E95_RS21000;Dbxref=GenBank:WP_000084690.1;Name=WP_000084690.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=C9E95_RS21000;product=dipeptide ABC transporter permease DppC;protein_id=WP_000084690.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 43830 44849 . - . ID=gene-C9E95_RS21005;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=C9E95_RS21005;old_locus_tag=C9E95_21505 NZ_PYJW01000177.1 Protein Homology CDS 43830 44849 . - 0 ID=cds-WP_000938843.1;Parent=gene-C9E95_RS21005;Dbxref=GenBank:WP_000938843.1;Name=WP_000938843.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=C9E95_RS21005;product=dipeptide ABC transporter permease DppB;protein_id=WP_000938843.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 45006 46613 . - . ID=gene-C9E95_RS21010;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=C9E95_RS21010;old_locus_tag=C9E95_21510 NZ_PYJW01000177.1 Protein Homology CDS 45006 46613 . - 0 ID=cds-WP_000028047.1;Parent=gene-C9E95_RS21010;Dbxref=GenBank:WP_000028047.1;Name=WP_000028047.1;Ontology_term=GO:0042938,GO:0071916,GO:0030288;gbkey=CDS;gene=dppA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=C9E95_RS21010;product=dipeptide ABC transporter periplasmic-binding protein DppA;protein_id=WP_000028047.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 47169 48494 . - . ID=gene-C9E95_RS21015;Name=C9E95_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21015;old_locus_tag=C9E95_21515 NZ_PYJW01000177.1 Protein Homology CDS 47169 48494 . - 0 ID=cds-WP_135369883.1;Parent=gene-C9E95_RS21015;Dbxref=GenBank:WP_135369883.1;Name=WP_135369883.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=C9E95_RS21015;product=uracil-xanthine permease family protein;protein_id=WP_135369883.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 48552 49676 . - . ID=gene-C9E95_RS21020;Name=C9E95_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21020;old_locus_tag=C9E95_21520 NZ_PYJW01000177.1 Protein Homology CDS 48552 49676 . - 0 ID=cds-WP_000940804.1;Parent=gene-C9E95_RS21020;Dbxref=GenBank:WP_000940804.1;Name=WP_000940804.1;Ontology_term=GO:0004062;gbkey=CDS;go_function=aryl sulfotransferase activity|0004062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462534.1;locus_tag=C9E95_RS21020;product=aryl-sulfate sulfotransferase;protein_id=WP_000940804.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 49826 50833 . + . ID=gene-C9E95_RS21025;Name=C9E95_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21025;old_locus_tag=C9E95_21525 NZ_PYJW01000177.1 Protein Homology CDS 49826 50833 . + 0 ID=cds-WP_000290707.1;Parent=gene-C9E95_RS21025;Dbxref=GenBank:WP_000290707.1;Name=WP_000290707.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462535.1;locus_tag=C9E95_RS21025;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000290707.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 50824 50942 . - . ID=gene-C9E95_RS21030;Name=C9E95_RS21030;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E95_RS21030;old_locus_tag=C9E95_21530 NZ_PYJW01000177.1 cmsearch ncRNA 50824 50942 . - . ID=rna-C9E95_RS21030;Parent=gene-C9E95_RS21030;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS21030;product=RtT sRNA NZ_PYJW01000177.1 cmsearch exon 50824 50942 . - . ID=exon-C9E95_RS21030-1;Parent=rna-C9E95_RS21030;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS21030;product=RtT sRNA NZ_PYJW01000177.1 RefSeq gene 50977 51110 . - . ID=gene-C9E95_RS21035;Name=C9E95_RS21035;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E95_RS21035;old_locus_tag=C9E95_21535 NZ_PYJW01000177.1 cmsearch ncRNA 50977 51110 . - . ID=rna-C9E95_RS21035;Parent=gene-C9E95_RS21035;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS21035;product=RtT sRNA NZ_PYJW01000177.1 cmsearch exon 50977 51110 . - . ID=exon-C9E95_RS21035-1;Parent=rna-C9E95_RS21035;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS21035;product=RtT sRNA NZ_PYJW01000177.1 RefSeq gene 51146 51222 . - . ID=gene-C9E95_RS21040;Name=C9E95_RS21040;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS21040;old_locus_tag=C9E95_21540 NZ_PYJW01000177.1 tRNAscan-SE tRNA 51146 51222 . - . ID=rna-C9E95_RS21040;Parent=gene-C9E95_RS21040;anticodon=(pos:complement(51186..51188));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS21040;product=tRNA-Pro NZ_PYJW01000177.1 tRNAscan-SE exon 51146 51222 . - . ID=exon-C9E95_RS21040-1;Parent=rna-C9E95_RS21040;anticodon=(pos:complement(51186..51188));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS21040;product=tRNA-Pro NZ_PYJW01000177.1 RefSeq gene 51313 53004 . - . ID=gene-C9E95_RS21045;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=C9E95_RS21045;old_locus_tag=C9E95_21545 NZ_PYJW01000177.1 Protein Homology CDS 51313 53004 . - 0 ID=cds-WP_001269246.1;Parent=gene-C9E95_RS21045;Dbxref=GenBank:WP_001269246.1;Name=WP_001269246.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462536.1;locus_tag=C9E95_RS21045;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_001269246.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 53222 53749 . - . ID=gene-C9E95_RS21050;Name=lpfE;gbkey=Gene;gene=lpfE;gene_biotype=protein_coding;locus_tag=C9E95_RS21050;old_locus_tag=C9E95_21550 NZ_PYJW01000177.1 Protein Homology CDS 53222 53749 . - 0 ID=cds-WP_061378565.1;Parent=gene-C9E95_RS21050;Dbxref=GenBank:WP_061378565.1;Name=WP_061378565.1;gbkey=CDS;gene=lpfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462537.1;locus_tag=C9E95_RS21050;product=long polar fimbrial protein LpfE;protein_id=WP_061378565.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 53755 54819 . - . ID=gene-C9E95_RS21055;Name=lpfD;gbkey=Gene;gene=lpfD;gene_biotype=protein_coding;locus_tag=C9E95_RS21055;old_locus_tag=C9E95_21555 NZ_PYJW01000177.1 Protein Homology CDS 53755 54819 . - 0 ID=cds-WP_061378564.1;Parent=gene-C9E95_RS21055;Dbxref=GenBank:WP_061378564.1;Name=WP_061378564.1;gbkey=CDS;gene=lpfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462538.1;locus_tag=C9E95_RS21055;product=long polar fimbrial protein LpfD;protein_id=WP_061378564.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 54837 57365 . - . ID=gene-C9E95_RS21060;Name=lpfC;gbkey=Gene;gene=lpfC;gene_biotype=protein_coding;locus_tag=C9E95_RS21060;old_locus_tag=C9E95_21560 NZ_PYJW01000177.1 Protein Homology CDS 54837 57365 . - 0 ID=cds-WP_023216230.1;Parent=gene-C9E95_RS21060;Dbxref=GenBank:WP_023216230.1;Name=WP_023216230.1;gbkey=CDS;gene=lpfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462539.1;locus_tag=C9E95_RS21060;product=outer membrane usher protein LpfC;protein_id=WP_023216230.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 57388 58086 . - . ID=gene-C9E95_RS21065;Name=lpfB;gbkey=Gene;gene=lpfB;gene_biotype=protein_coding;locus_tag=C9E95_RS21065;old_locus_tag=C9E95_21565 NZ_PYJW01000177.1 Protein Homology CDS 57388 58086 . - 0 ID=cds-WP_001082125.1;Parent=gene-C9E95_RS21065;Dbxref=GenBank:WP_001082125.1;Name=WP_001082125.1;gbkey=CDS;gene=lpfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462540.1;locus_tag=C9E95_RS21065;product=long polar fimbrial chaperone LpfB;protein_id=WP_001082125.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 58171 58695 . - . ID=gene-C9E95_RS21070;Name=lpfA;gbkey=Gene;gene=lpfA;gene_biotype=protein_coding;locus_tag=C9E95_RS21070;old_locus_tag=C9E95_21570 NZ_PYJW01000177.1 Protein Homology CDS 58171 58695 . - 0 ID=cds-WP_207301664.1;Parent=gene-C9E95_RS21070;Dbxref=GenBank:WP_207301664.1;Name=WP_207301664.1;gbkey=CDS;gene=lpfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519917.1;locus_tag=C9E95_RS21070;product=long polar fimbrial major subunit LpfA;protein_id=WP_207301664.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 59213 59917 . - . ID=gene-C9E95_RS21075;Name=C9E95_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21075;old_locus_tag=C9E95_21575 NZ_PYJW01000177.1 Protein Homology CDS 59213 59917 . - 0 ID=cds-WP_000637072.1;Parent=gene-C9E95_RS21075;Dbxref=GenBank:WP_000637072.1;Name=WP_000637072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462542.1;locus_tag=C9E95_RS21075;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000637072.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 60074 60655 . + . ID=gene-C9E95_RS21080;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=C9E95_RS21080;old_locus_tag=C9E95_21580 NZ_PYJW01000177.1 Protein Homology CDS 60074 60655 . + 0 ID=cds-WP_115276190.1;Parent=gene-C9E95_RS21080;Dbxref=GenBank:WP_115276190.1;Name=WP_115276190.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462543.1;locus_tag=C9E95_RS21080;product=DNA-3-methyladenine glycosylase I;protein_id=WP_115276190.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 60633 61073 . + . ID=gene-C9E95_RS21085;Name=C9E95_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21085;old_locus_tag=C9E95_21585 NZ_PYJW01000177.1 Protein Homology CDS 60633 61073 . + 0 ID=cds-WP_000619902.1;Parent=gene-C9E95_RS21085;Dbxref=GenBank:WP_000619902.1;Name=WP_000619902.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462544.1;locus_tag=C9E95_RS21085;product=N-acetyltransferase;protein_id=WP_000619902.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 61042 63375 . - . ID=gene-C9E95_RS21090;Name=C9E95_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21090;old_locus_tag=C9E95_21590 NZ_PYJW01000177.1 Protein Homology CDS 61042 63375 . - 0 ID=cds-WP_135369884.1;Parent=gene-C9E95_RS21090;Dbxref=GenBank:WP_135369884.1;Name=WP_135369884.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462545.1;locus_tag=C9E95_RS21090;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_135369884.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 63527 64189 . + . ID=gene-C9E95_RS21095;Name=C9E95_RS21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21095;old_locus_tag=C9E95_21595 NZ_PYJW01000177.1 Protein Homology CDS 63527 64189 . + 0 ID=cds-WP_000747548.1;Parent=gene-C9E95_RS21095;Dbxref=GenBank:WP_000747548.1;Name=WP_000747548.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462546.1;locus_tag=C9E95_RS21095;product=OmpA family lipoprotein;protein_id=WP_000747548.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 64408 65382 . + . ID=gene-C9E95_RS21100;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=C9E95_RS21100;old_locus_tag=C9E95_21600 NZ_PYJW01000177.1 Protein Homology CDS 64408 65382 . + 0 ID=cds-WP_080068147.1;Parent=gene-C9E95_RS21100;Dbxref=GenBank:WP_080068147.1;Name=WP_080068147.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462547.1;locus_tag=C9E95_RS21100;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_080068147.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 65432 66142 . - . ID=gene-C9E95_RS21105;Name=C9E95_RS21105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21105;old_locus_tag=C9E95_21605 NZ_PYJW01000177.1 Protein Homology CDS 65432 66142 . - 0 ID=cds-WP_000190524.1;Parent=gene-C9E95_RS21105;Dbxref=GenBank:WP_000190524.1;Name=WP_000190524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462548.1;locus_tag=C9E95_RS21105;product=DUF3053 domain-containing protein;protein_id=WP_000190524.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 66581 66871 . + . ID=gene-C9E95_RS21110;Name=C9E95_RS21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21110;old_locus_tag=C9E95_21610 NZ_PYJW01000177.1 Protein Homology CDS 66581 66871 . + 0 ID=cds-WP_000455790.1;Parent=gene-C9E95_RS21110;Dbxref=GenBank:WP_000455790.1;Name=WP_000455790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462549.1;locus_tag=C9E95_RS21110;product=HTH-type transcriptional regulator;protein_id=WP_000455790.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 67159 67371 . + . ID=gene-C9E95_RS21115;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=C9E95_RS21115;old_locus_tag=C9E95_21615 NZ_PYJW01000177.1 Protein Homology CDS 67159 67371 . + 0 ID=cds-WP_000014594.1;Parent=gene-C9E95_RS21115;Dbxref=GenBank:WP_000014594.1;Name=WP_000014594.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=C9E95_RS21115;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000014594.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 67554 68093 . + . ID=gene-C9E95_RS21120;Name=cueP;gbkey=Gene;gene=cueP;gene_biotype=protein_coding;locus_tag=C9E95_RS21120;old_locus_tag=C9E95_21620 NZ_PYJW01000177.1 Protein Homology CDS 67554 68093 . + 0 ID=cds-WP_000047149.1;Parent=gene-C9E95_RS21120;Dbxref=GenBank:WP_000047149.1;Name=WP_000047149.1;gbkey=CDS;gene=cueP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462551.1;locus_tag=C9E95_RS21120;product=copper-binding periplasmic metallochaperone CueP;protein_id=WP_000047149.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 68464 68949 . - . ID=gene-C9E95_RS21125;Name=C9E95_RS21125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21125;old_locus_tag=C9E95_21625 NZ_PYJW01000177.1 Protein Homology CDS 68464 68949 . - 0 ID=cds-WP_080204125.1;Parent=gene-C9E95_RS21125;Dbxref=GenBank:WP_080204125.1;Name=WP_080204125.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462552.1;locus_tag=C9E95_RS21125;product=GNAT family N-acetyltransferase;protein_id=WP_080204125.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 68937 69224 . - . ID=gene-C9E95_RS21130;Name=C9E95_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21130;old_locus_tag=C9E95_21630 NZ_PYJW01000177.1 Protein Homology CDS 68937 69224 . - 0 ID=cds-WP_000965886.1;Parent=gene-C9E95_RS21130;Dbxref=GenBank:WP_000965886.1;Name=WP_000965886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462553.1;locus_tag=C9E95_RS21130;product=DUF1778 domain-containing protein;protein_id=WP_000965886.1;transl_table=11 NZ_PYJW01000177.1 RefSeq pseudogene 69390 69996 . - . ID=gene-C9E95_RS21135;Name=C9E95_RS21135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS21135;old_locus_tag=C9E95_21635;pseudo=true NZ_PYJW01000177.1 Protein Homology CDS 69390 69996 . - 0 ID=cds-C9E95_RS21135;Parent=gene-C9E95_RS21135;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227035.1;locus_tag=C9E95_RS21135;product=cysteine hydrolase family protein;pseudo=true;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 70037 71239 . - . ID=gene-C9E95_RS21140;Name=C9E95_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21140;old_locus_tag=C9E95_21640 NZ_PYJW01000177.1 Protein Homology CDS 70037 71239 . - 0 ID=cds-WP_080204126.1;Parent=gene-C9E95_RS21140;Dbxref=GenBank:WP_080204126.1;Name=WP_080204126.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628845.1;locus_tag=C9E95_RS21140;product=MFS transporter;protein_id=WP_080204126.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 71325 71975 . + . ID=gene-C9E95_RS21145;Name=C9E95_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21145;old_locus_tag=C9E95_21645 NZ_PYJW01000177.1 Protein Homology CDS 71325 71975 . + 0 ID=cds-WP_023993641.1;Parent=gene-C9E95_RS21145;Dbxref=GenBank:WP_023993641.1;Name=WP_023993641.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247421.1;locus_tag=C9E95_RS21145;product=GntR family transcriptional regulator;protein_id=WP_023993641.1;transl_table=11 NZ_PYJW01000177.1 RefSeq gene 72094 72594 . - . ID=gene-C9E95_RS21150;Name=C9E95_RS21150;end_range=72594,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21150;old_locus_tag=C9E95_21650;partial=true NZ_PYJW01000177.1 Protein Homology CDS 72094 72594 . - 0 ID=cds-WP_023994297.1;Parent=gene-C9E95_RS21150;Dbxref=GenBank:WP_023994297.1;Name=WP_023994297.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677;end_range=72594,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=C9E95_RS21150;partial=true;product=IS3 family transposase;protein_id=WP_023994297.1;transl_table=11 ##sequence-region NZ_PYJW01000031.1 1 1241 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000031.1 RefSeq region 1 1241 . + . ID=NZ_PYJW01000031.1:1..1241;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000031.1 RefSeq pseudogene 491 664 . - . ID=gene-C9E95_RS23690;Name=C9E95_RS23690;end_range=664,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23690;partial=true;pseudo=true;start_range=.,491 NZ_PYJW01000031.1 Protein Homology CDS 491 664 . - 0 ID=cds-C9E95_RS23690;Parent=gene-C9E95_RS23690;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=664,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=C9E95_RS23690;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,491;transl_table=11 NZ_PYJW01000031.1 RefSeq gene 801 1058 . + . ID=gene-C9E95_RS01760;Name=C9E95_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01760;old_locus_tag=C9E95_01795 NZ_PYJW01000031.1 Protein Homology CDS 801 1058 . + 0 ID=cds-WP_080204121.1;Parent=gene-C9E95_RS01760;Dbxref=GenBank:WP_080204121.1;Name=WP_080204121.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000994230.1;locus_tag=C9E95_RS01760;product=SymE family type I addiction module toxin;protein_id=WP_080204121.1;transl_table=11 ##sequence-region NZ_PYJW01000182.1 1 69110 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000182.1 RefSeq region 1 69110 . + . ID=NZ_PYJW01000182.1:1..69110;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000182.1 RefSeq gene 62 1714 . - . ID=gene-C9E95_RS21390;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=C9E95_RS21390;old_locus_tag=C9E95_21900 NZ_PYJW01000182.1 Protein Homology CDS 62 1714 . - 0 ID=cds-WP_023245534.1;Parent=gene-C9E95_RS21390;Dbxref=GenBank:WP_023245534.1;Name=WP_023245534.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459489.1;locus_tag=C9E95_RS21390;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_023245534.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 1887 3107 . + . ID=gene-C9E95_RS21395;Name=C9E95_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21395;old_locus_tag=C9E95_21905 NZ_PYJW01000182.1 Protein Homology CDS 1887 3107 . + 0 ID=cds-WP_080204028.1;Parent=gene-C9E95_RS21395;Dbxref=GenBank:WP_080204028.1;Name=WP_080204028.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459488.1;locus_tag=C9E95_RS21395;product=MFS transporter;protein_id=WP_080204028.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 3322 4998 . + . ID=gene-C9E95_RS21400;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=C9E95_RS21400;old_locus_tag=C9E95_21910 NZ_PYJW01000182.1 Protein Homology CDS 3322 4998 . + 0 ID=cds-WP_000546202.1;Parent=gene-C9E95_RS21400;Dbxref=GenBank:WP_000546202.1;Name=WP_000546202.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459487.1;locus_tag=C9E95_RS21400;product=YbaL family putative K(+) efflux transporter;protein_id=WP_000546202.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 5047 6351 . - . ID=gene-C9E95_RS21405;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=C9E95_RS21405;old_locus_tag=C9E95_21915 NZ_PYJW01000182.1 Protein Homology CDS 5047 6351 . - 0 ID=cds-WP_000671592.1;Parent=gene-C9E95_RS21405;Dbxref=GenBank:WP_000671592.1;Name=WP_000671592.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459486.1;locus_tag=C9E95_RS21405;product=inosine/guanosine kinase;protein_id=WP_000671592.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 6504 7475 . + . ID=gene-C9E95_RS21410;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=C9E95_RS21410;old_locus_tag=C9E95_21920 NZ_PYJW01000182.1 Protein Homology CDS 6504 7475 . + 0 ID=cds-WP_080204027.1;Parent=gene-C9E95_RS21410;Dbxref=GenBank:WP_080204027.1;Name=WP_080204027.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459485.1;locus_tag=C9E95_RS21410;product=acetyl esterase;protein_id=WP_080204027.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 7472 8434 . - . ID=gene-C9E95_RS21415;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=C9E95_RS21415;old_locus_tag=C9E95_21925 NZ_PYJW01000182.1 Protein Homology CDS 7472 8434 . - 0 ID=cds-WP_080204026.1;Parent=gene-C9E95_RS21415;Dbxref=GenBank:WP_080204026.1;Name=WP_080204026.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459484.1;locus_tag=C9E95_RS21415;product=ferrochelatase;protein_id=WP_080204026.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 8663 9307 . - . ID=gene-C9E95_RS21420;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=C9E95_RS21420;old_locus_tag=C9E95_21935 NZ_PYJW01000182.1 Protein Homology CDS 8663 9307 . - 0 ID=cds-WP_001220237.1;Parent=gene-C9E95_RS21420;Dbxref=GenBank:WP_001220237.1;Name=WP_001220237.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=C9E95_RS21420;product=adenylate kinase;protein_id=WP_001220237.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 9549 11423 . - . ID=gene-C9E95_RS21425;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=C9E95_RS21425;old_locus_tag=C9E95_21945 NZ_PYJW01000182.1 Protein Homology CDS 9549 11423 . - 0 ID=cds-WP_001523272.1;Parent=gene-C9E95_RS21425;Dbxref=GenBank:WP_001523272.1;Name=WP_001523272.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=C9E95_RS21425;product=molecular chaperone HtpG;protein_id=WP_001523272.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 11534 12139 . - . ID=gene-C9E95_RS21430;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=C9E95_RS21430;old_locus_tag=C9E95_21950 NZ_PYJW01000182.1 Protein Homology CDS 11534 12139 . - 0 ID=cds-WP_001195023.1;Parent=gene-C9E95_RS21430;Dbxref=GenBank:WP_001195023.1;Name=WP_001195023.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459481.1;locus_tag=C9E95_RS21430;product=recombination mediator RecR;protein_id=WP_001195023.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 12139 12468 . - . ID=gene-C9E95_RS21435;Name=C9E95_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21435;old_locus_tag=C9E95_21955 NZ_PYJW01000182.1 Protein Homology CDS 12139 12468 . - 0 ID=cds-WP_000467098.1;Parent=gene-C9E95_RS21435;Dbxref=GenBank:WP_000467098.1;Name=WP_000467098.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=C9E95_RS21435;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_000467098.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 12514 14442 . - . ID=gene-C9E95_RS21440;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=C9E95_RS21440;old_locus_tag=C9E95_21960 NZ_PYJW01000182.1 Protein Homology CDS 12514 14442 . - 0 ID=cds-WP_000121967.1;Parent=gene-C9E95_RS21440;Dbxref=GenBank:WP_000121967.1;Name=WP_000121967.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459479.1;locus_tag=C9E95_RS21440;product=DNA polymerase III subunit gamma/tau;protein_id=WP_000121967.1;transl_table=11 NZ_PYJW01000182.1 cmsearch sequence_feature 13117 13181 . - . ID=id-C9E95_RS21440;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS21440 NZ_PYJW01000182.1 RefSeq gene 14556 15107 . - . ID=gene-C9E95_RS21445;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=C9E95_RS21445;old_locus_tag=C9E95_21965 NZ_PYJW01000182.1 Protein Homology CDS 14556 15107 . - 0 ID=cds-WP_000127350.1;Parent=gene-C9E95_RS21445;Dbxref=GenBank:WP_000127350.1;Name=WP_000127350.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=C9E95_RS21445;product=adenine phosphoribosyltransferase;protein_id=WP_000127350.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 15260 15637 . - . ID=gene-C9E95_RS21450;Name=C9E95_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21450;old_locus_tag=C9E95_21975 NZ_PYJW01000182.1 Protein Homology CDS 15260 15637 . - 0 ID=cds-WP_001189860.1;Parent=gene-C9E95_RS21450;Dbxref=GenBank:WP_001189860.1;Name=WP_001189860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459477.1;locus_tag=C9E95_RS21450;product=DUF454 family protein;protein_id=WP_001189860.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 15706 16233 . + . ID=gene-C9E95_RS21455;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=C9E95_RS21455;old_locus_tag=C9E95_21980 NZ_PYJW01000182.1 Protein Homology CDS 15706 16233 . + 0 ID=cds-WP_001519637.1;Parent=gene-C9E95_RS21455;Dbxref=GenBank:WP_001519637.1;Name=WP_001519637.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001454692.1;locus_tag=C9E95_RS21455;product=primosomal replication protein N'';protein_id=WP_001519637.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 16247 16414 . + . ID=gene-C9E95_RS21460;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=C9E95_RS21460;old_locus_tag=C9E95_21985 NZ_PYJW01000182.1 Protein Homology CDS 16247 16414 . + 0 ID=cds-WP_000051161.1;Parent=gene-C9E95_RS21460;Dbxref=GenBank:WP_000051161.1;Name=WP_000051161.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459475.1;locus_tag=C9E95_RS21460;product=pleiotropic regulatory protein RsmS;protein_id=WP_000051161.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 16484 17419 . + . ID=gene-C9E95_RS21465;Name=C9E95_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21465;old_locus_tag=C9E95_21990 NZ_PYJW01000182.1 Protein Homology CDS 16484 17419 . + 0 ID=cds-WP_000440507.1;Parent=gene-C9E95_RS21465;Dbxref=GenBank:WP_000440507.1;Name=WP_000440507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459474.1;locus_tag=C9E95_RS21465;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000440507.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 17461 20823 . - . ID=gene-C9E95_RS21470;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=C9E95_RS21470;old_locus_tag=C9E95_21995 NZ_PYJW01000182.1 Protein Homology CDS 17461 20823 . - 0 ID=cds-WP_000178245.1;Parent=gene-C9E95_RS21470;Dbxref=GenBank:WP_000178245.1;Name=WP_000178245.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459473.1;locus_tag=C9E95_RS21470;product=mechanosensitive channel MscK;protein_id=WP_000178245.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 20942 21595 . - . ID=gene-C9E95_RS21475;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=C9E95_RS21475;old_locus_tag=C9E95_22000 NZ_PYJW01000182.1 Protein Homology CDS 20942 21595 . - 0 ID=cds-WP_000101753.1;Parent=gene-C9E95_RS21475;Dbxref=GenBank:WP_000101753.1;Name=WP_000101753.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459472.1;locus_tag=C9E95_RS21475;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_000101753.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 21737 22930 . + . ID=gene-C9E95_RS21480;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=C9E95_RS21480;old_locus_tag=C9E95_22005 NZ_PYJW01000182.1 Protein Homology CDS 21737 22930 . + 0 ID=cds-WP_080204024.1;Parent=gene-C9E95_RS21480;Dbxref=GenBank:WP_080204024.1;Name=WP_080204024.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459471.1;locus_tag=C9E95_RS21480;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_080204024.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 22953 26102 . + . ID=gene-C9E95_RS21485;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=C9E95_RS21485;old_locus_tag=C9E95_22010 NZ_PYJW01000182.1 Protein Homology CDS 22953 26102 . + 0 ID=cds-WP_135369887.1;Parent=gene-C9E95_RS21485;Dbxref=GenBank:WP_135369887.1;Name=WP_135369887.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=C9E95_RS21485;product=efflux RND transporter permease AcrB;protein_id=WP_135369887.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 26598 26972 . + . ID=gene-C9E95_RS21490;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=C9E95_RS21490;old_locus_tag=C9E95_22015 NZ_PYJW01000182.1 Protein Homology CDS 26598 26972 . + 0 ID=cds-WP_000344807.1;Parent=gene-C9E95_RS21490;Dbxref=GenBank:WP_000344807.1;Name=WP_000344807.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=C9E95_RS21490;product=Hha toxicity modulator TomB;protein_id=WP_000344807.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 27000 27218 . + . ID=gene-C9E95_RS21495;Name=C9E95_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21495;old_locus_tag=C9E95_22020 NZ_PYJW01000182.1 Protein Homology CDS 27000 27218 . + 0 ID=cds-WP_001280991.1;Parent=gene-C9E95_RS21495;Dbxref=GenBank:WP_001280991.1;Name=WP_001280991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459468.1;locus_tag=C9E95_RS21495;product=HHA domain-containing protein;protein_id=WP_001280991.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 27397 27948 . + . ID=gene-C9E95_RS21500;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=C9E95_RS21500;old_locus_tag=C9E95_22025 NZ_PYJW01000182.1 Protein Homology CDS 27397 27948 . + 0 ID=cds-WP_080204023.1;Parent=gene-C9E95_RS21500;Dbxref=GenBank:WP_080204023.1;Name=WP_080204023.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459467.1;locus_tag=C9E95_RS21500;product=maltose O-acetyltransferase;protein_id=WP_080204023.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 28065 28535 . + . ID=gene-C9E95_RS21505;Name=C9E95_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21505;old_locus_tag=C9E95_22030 NZ_PYJW01000182.1 Protein Homology CDS 28065 28535 . + 0 ID=cds-WP_000136181.1;Parent=gene-C9E95_RS21505;Dbxref=GenBank:WP_000136181.1;Name=WP_000136181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459466.1;locus_tag=C9E95_RS21505;product=YlaC family protein;protein_id=WP_000136181.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 28591 28731 . - . ID=gene-C9E95_RS21510;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=C9E95_RS21510;old_locus_tag=C9E95_22035 NZ_PYJW01000182.1 Protein Homology CDS 28591 28731 . - 0 ID=cds-WP_001197749.1;Parent=gene-C9E95_RS21510;Dbxref=GenBank:WP_001197749.1;Name=WP_001197749.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459465.1;locus_tag=C9E95_RS21510;product=type B 50S ribosomal protein L36;protein_id=WP_001197749.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 28737 28997 . - . ID=gene-C9E95_RS21515;Name=C9E95_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21515;old_locus_tag=C9E95_22040 NZ_PYJW01000182.1 Protein Homology CDS 28737 28997 . - 0 ID=cds-WP_000801415.1;Parent=gene-C9E95_RS21515;Dbxref=GenBank:WP_000801415.1;Name=WP_000801415.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459464.1;locus_tag=C9E95_RS21515;product=type B 50S ribosomal protein L31;protein_id=WP_000801415.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 29222 30772 . + . ID=gene-C9E95_RS21520;Name=C9E95_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21520;old_locus_tag=C9E95_22045 NZ_PYJW01000182.1 Protein Homology CDS 29222 30772 . + 0 ID=cds-WP_000213139.1;Parent=gene-C9E95_RS21520;Dbxref=GenBank:WP_000213139.1;Name=WP_000213139.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459463.1;locus_tag=C9E95_RS21520;product=EAL domain-containing protein;protein_id=WP_000213139.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 30822 30918 . - . ID=gene-C9E95_RS21525;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=C9E95_RS21525;old_locus_tag=C9E95_22050 NZ_PYJW01000182.1 cmsearch SRP_RNA 30822 30918 . - . ID=rna-C9E95_RS21525;Parent=gene-C9E95_RS21525;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS21525;product=signal recognition particle sRNA small type NZ_PYJW01000182.1 cmsearch exon 30822 30918 . - . ID=exon-C9E95_RS21525-1;Parent=rna-C9E95_RS21525;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS21525;product=signal recognition particle sRNA small type NZ_PYJW01000182.1 RefSeq gene 31003 31392 . + . ID=gene-C9E95_RS21530;Name=C9E95_RS21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21530;old_locus_tag=C9E95_22055 NZ_PYJW01000182.1 Protein Homology CDS 31003 31392 . + 0 ID=cds-WP_000961285.1;Parent=gene-C9E95_RS21530;Dbxref=GenBank:WP_000961285.1;Name=WP_000961285.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459462.1;locus_tag=C9E95_RS21530;product=MGMT family protein;protein_id=WP_000961285.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 31425 31994 . - . ID=gene-C9E95_RS21535;Name=C9E95_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21535;old_locus_tag=C9E95_22060 NZ_PYJW01000182.1 Protein Homology CDS 31425 31994 . - 0 ID=cds-WP_000779803.1;Parent=gene-C9E95_RS21535;Dbxref=GenBank:WP_000779803.1;Name=WP_000779803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459461.1;locus_tag=C9E95_RS21535;product=YbaY family lipoprotein;protein_id=WP_000779803.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 32209 33069 . + . ID=gene-C9E95_RS21540;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=C9E95_RS21540;old_locus_tag=C9E95_22065 NZ_PYJW01000182.1 Protein Homology CDS 32209 33069 . + 0 ID=cds-WP_000084176.1;Parent=gene-C9E95_RS21540;Dbxref=GenBank:WP_000084176.1;Name=WP_000084176.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459460.1;locus_tag=C9E95_RS21540;product=acyl-CoA thioesterase II;protein_id=WP_000084176.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 33169 34455 . - . ID=gene-C9E95_RS21545;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=C9E95_RS21545;old_locus_tag=C9E95_22070 NZ_PYJW01000182.1 Protein Homology CDS 33169 34455 . - 0 ID=cds-WP_000684912.1;Parent=gene-C9E95_RS21545;Dbxref=GenBank:WP_000684912.1;Name=WP_000684912.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459459.1;locus_tag=C9E95_RS21545;product=ammonium transporter AmtB;protein_id=WP_000684912.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 34487 34825 . - . ID=gene-C9E95_RS21550;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=C9E95_RS21550;old_locus_tag=C9E95_22075 NZ_PYJW01000182.1 Protein Homology CDS 34487 34825 . - 0 ID=cds-WP_000780341.1;Parent=gene-C9E95_RS21550;Dbxref=GenBank:WP_000780341.1;Name=WP_000780341.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459458.1;locus_tag=C9E95_RS21550;product=P-II family nitrogen regulator;protein_id=WP_000780341.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 35038 36819 . - . ID=gene-C9E95_RS21555;Name=C9E95_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21555;old_locus_tag=C9E95_22080 NZ_PYJW01000182.1 Protein Homology CDS 35038 36819 . - 0 ID=cds-WP_001256076.1;Parent=gene-C9E95_RS21555;Dbxref=GenBank:WP_001256076.1;Name=WP_001256076.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459457.1;locus_tag=C9E95_RS21555;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_001256076.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 36812 38584 . - . ID=gene-C9E95_RS21560;Name=C9E95_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21560;old_locus_tag=C9E95_22085 NZ_PYJW01000182.1 Protein Homology CDS 36812 38584 . - 0 ID=cds-WP_001235559.1;Parent=gene-C9E95_RS21560;Dbxref=GenBank:WP_001235559.1;Name=WP_001235559.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459456.1;locus_tag=C9E95_RS21560;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_001235559.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 38625 39083 . - . ID=gene-C9E95_RS21565;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=C9E95_RS21565;old_locus_tag=C9E95_22090 NZ_PYJW01000182.1 Protein Homology CDS 38625 39083 . - 0 ID=cds-WP_000884593.1;Parent=gene-C9E95_RS21565;Dbxref=GenBank:WP_000884593.1;Name=WP_000884593.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459455.1;locus_tag=C9E95_RS21565;product=DNA-binding transcriptional regulator DecR;protein_id=WP_000884593.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 39196 40251 . + . ID=gene-C9E95_RS21570;Name=cdsH;gbkey=Gene;gene=cdsH;gene_biotype=protein_coding;locus_tag=C9E95_RS21570;old_locus_tag=C9E95_22095 NZ_PYJW01000182.1 Protein Homology CDS 39196 40251 . + 0 ID=cds-WP_072103664.1;Parent=gene-C9E95_RS21570;Dbxref=GenBank:WP_072103664.1;Name=WP_072103664.1;gbkey=CDS;gene=cdsH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459454.1;locus_tag=C9E95_RS21570;product=cysteine desulfhydrase;protein_id=WP_072103664.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 40301 41119 . - . ID=gene-C9E95_RS21575;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=C9E95_RS21575;old_locus_tag=C9E95_22100 NZ_PYJW01000182.1 Protein Homology CDS 40301 41119 . - 0 ID=cds-WP_000113030.1;Parent=gene-C9E95_RS21575;Dbxref=GenBank:WP_000113030.1;Name=WP_000113030.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459453.1;locus_tag=C9E95_RS21575;product=HMP-PP phosphatase;protein_id=WP_000113030.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 41220 42920 . + . ID=gene-C9E95_RS21580;Name=C9E95_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21580;old_locus_tag=C9E95_22105 NZ_PYJW01000182.1 Protein Homology CDS 41220 42920 . + 0 ID=cds-WP_001238163.1;Parent=gene-C9E95_RS21580;Dbxref=GenBank:WP_001238163.1;Name=WP_001238163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459452.1;locus_tag=C9E95_RS21580;product=SgrR family transcriptional regulator;protein_id=WP_001238163.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 42985 43680 . + . ID=gene-C9E95_RS21585;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=C9E95_RS21585;old_locus_tag=C9E95_22110 NZ_PYJW01000182.1 Protein Homology CDS 42985 43680 . + 0 ID=cds-WP_000817201.1;Parent=gene-C9E95_RS21585;Dbxref=GenBank:WP_000817201.1;Name=WP_000817201.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459451.1;locus_tag=C9E95_RS21585;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_000817201.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 43786 44184 . - . ID=gene-C9E95_RS21590;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=C9E95_RS21590;old_locus_tag=C9E95_22115 NZ_PYJW01000182.1 Protein Homology CDS 43786 44184 . - 0 ID=cds-WP_001194543.1;Parent=gene-C9E95_RS21590;Dbxref=GenBank:WP_001194543.1;Name=WP_001194543.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459450.1;locus_tag=C9E95_RS21590;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194543.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 44288 44662 . - . ID=gene-C9E95_RS21595;Name=C9E95_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21595;old_locus_tag=C9E95_22120 NZ_PYJW01000182.1 Protein Homology CDS 44288 44662 . - 0 ID=cds-WP_000680322.1;Parent=gene-C9E95_RS21595;Dbxref=GenBank:WP_000680322.1;Name=WP_000680322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459449.1;locus_tag=C9E95_RS21595;product=helix-hairpin-helix domain-containing protein;protein_id=WP_000680322.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 44812 46683 . - . ID=gene-C9E95_RS21600;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=C9E95_RS21600;old_locus_tag=C9E95_22125 NZ_PYJW01000182.1 Protein Homology CDS 44812 46683 . - 0 ID=cds-WP_080204022.1;Parent=gene-C9E95_RS21600;Dbxref=GenBank:WP_080204022.1;Name=WP_080204022.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459448.1;locus_tag=C9E95_RS21600;product=peptidylprolyl isomerase;protein_id=WP_080204022.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 46974 47264 . - . ID=gene-C9E95_RS21605;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=C9E95_RS21605;old_locus_tag=C9E95_22130 NZ_PYJW01000182.1 Protein Homology CDS 46974 47264 . - 0 ID=cds-WP_254888479.1;Parent=gene-C9E95_RS21605;Dbxref=GenBank:WP_254888479.1;Name=WP_254888479.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=C9E95_RS21605;product=nucleoid-associated protein HU-beta;protein_id=WP_254888479.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 47455 49809 . - . ID=gene-C9E95_RS21610;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=C9E95_RS21610;old_locus_tag=C9E95_22135 NZ_PYJW01000182.1 Protein Homology CDS 47455 49809 . - 0 ID=cds-WP_001067723.1;Parent=gene-C9E95_RS21610;Dbxref=GenBank:WP_001067723.1;Name=WP_001067723.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=C9E95_RS21610;product=endopeptidase La;protein_id=WP_001067723.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 49995 51266 . - . ID=gene-C9E95_RS21615;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=C9E95_RS21615;old_locus_tag=C9E95_22140 NZ_PYJW01000182.1 Protein Homology CDS 49995 51266 . - 0 ID=cds-WP_000130314.1;Parent=gene-C9E95_RS21615;Dbxref=GenBank:WP_000130314.1;Name=WP_000130314.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=C9E95_RS21615;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_000130314.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 51518 52141 . - . ID=gene-C9E95_RS21620;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=C9E95_RS21620;old_locus_tag=C9E95_22145 NZ_PYJW01000182.1 Protein Homology CDS 51518 52141 . - 0 ID=cds-WP_000122257.1;Parent=gene-C9E95_RS21620;Dbxref=GenBank:WP_000122257.1;Name=WP_000122257.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=C9E95_RS21620;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_000122257.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 52388 53686 . - . ID=gene-C9E95_RS21625;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=C9E95_RS21625;old_locus_tag=C9E95_22150 NZ_PYJW01000182.1 Protein Homology CDS 52388 53686 . - 0 ID=cds-WP_001198403.1;Parent=gene-C9E95_RS21625;Dbxref=GenBank:WP_001198403.1;Name=WP_001198403.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=C9E95_RS21625;product=trigger factor;protein_id=WP_001198403.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 54033 54350 . - . ID=gene-C9E95_RS21635;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=C9E95_RS21635;old_locus_tag=C9E95_22160 NZ_PYJW01000182.1 Protein Homology CDS 54033 54350 . - 0 ID=cds-WP_000973433.1;Parent=gene-C9E95_RS21635;Dbxref=GenBank:WP_000973433.1;Name=WP_000973433.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459442.1;locus_tag=C9E95_RS21635;product=transcriptional regulator BolA;protein_id=WP_000973433.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 54654 55232 . + . ID=gene-C9E95_RS21640;Name=C9E95_RS21640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21640;old_locus_tag=C9E95_22170 NZ_PYJW01000182.1 Protein Homology CDS 54654 55232 . + 0 ID=cds-WP_001537832.1;Parent=gene-C9E95_RS21640;Dbxref=GenBank:WP_001537832.1;Name=WP_001537832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225436.1;locus_tag=C9E95_RS21640;product=lipoprotein;protein_id=WP_001537832.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 55276 56751 . + . ID=gene-C9E95_RS21645;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=C9E95_RS21645;old_locus_tag=C9E95_22175 NZ_PYJW01000182.1 Protein Homology CDS 55276 56751 . + 0 ID=cds-WP_000098471.1;Parent=gene-C9E95_RS21645;Dbxref=GenBank:WP_000098471.1;Name=WP_000098471.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459440.1;locus_tag=C9E95_RS21645;product=muropeptide MFS transporter AmpG;protein_id=WP_000098471.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 57204 58160 . + . ID=gene-C9E95_RS21650;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=C9E95_RS21650;old_locus_tag=C9E95_22180 NZ_PYJW01000182.1 Protein Homology CDS 57204 58160 . + 0 ID=cds-WP_001239448.1;Parent=gene-C9E95_RS21650;Dbxref=GenBank:WP_001239448.1;Name=WP_001239448.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459439.1;locus_tag=C9E95_RS21650;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_001239448.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 58171 60162 . + . ID=gene-C9E95_RS21655;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=C9E95_RS21655;old_locus_tag=C9E95_22185 NZ_PYJW01000182.1 Protein Homology CDS 58171 60162 . + 0 ID=cds-WP_000467158.1;Parent=gene-C9E95_RS21655;Dbxref=GenBank:WP_000467158.1;Name=WP_000467158.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=C9E95_RS21655;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_000467158.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 60152 60766 . + . ID=gene-C9E95_RS21660;Name=C9E95_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21660;old_locus_tag=C9E95_22190 NZ_PYJW01000182.1 Protein Homology CDS 60152 60766 . + 0 ID=cds-WP_000179833.1;Parent=gene-C9E95_RS21660;Dbxref=GenBank:WP_000179833.1;Name=WP_000179833.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459437.1;locus_tag=C9E95_RS21660;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_000179833.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 60766 61095 . + . ID=gene-C9E95_RS21665;Name=C9E95_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21665;old_locus_tag=C9E95_22195 NZ_PYJW01000182.1 Protein Homology CDS 60766 61095 . + 0 ID=cds-WP_000019878.1;Parent=gene-C9E95_RS21665;Dbxref=GenBank:WP_000019878.1;Name=WP_000019878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459436.1;locus_tag=C9E95_RS21665;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_000019878.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 61107 61997 . + . ID=gene-C9E95_RS21670;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=C9E95_RS21670;old_locus_tag=C9E95_22200 NZ_PYJW01000182.1 Protein Homology CDS 61107 61997 . + 0 ID=cds-WP_000971352.1;Parent=gene-C9E95_RS21670;Dbxref=GenBank:WP_000971352.1;Name=WP_000971352.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459435.1;locus_tag=C9E95_RS21670;product=heme o synthase;protein_id=WP_000971352.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 62045 63514 . - . ID=gene-C9E95_RS21675;Name=C9E95_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21675;old_locus_tag=C9E95_22205 NZ_PYJW01000182.1 Protein Homology CDS 62045 63514 . - 0 ID=cds-WP_080204021.1;Parent=gene-C9E95_RS21675;Dbxref=GenBank:WP_080204021.1;Name=WP_080204021.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524005.1;locus_tag=C9E95_RS21675;product=SEL1-like repeat protein;protein_id=WP_080204021.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 63526 65037 . - . ID=gene-C9E95_RS21680;Name=C9E95_RS21680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21680;old_locus_tag=C9E95_22210 NZ_PYJW01000182.1 Protein Homology CDS 63526 65037 . - 0 ID=cds-WP_080204020.1;Parent=gene-C9E95_RS21680;Dbxref=GenBank:WP_080204020.1;Name=WP_080204020.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459433.1;locus_tag=C9E95_RS21680;product=SEL1-like repeat protein;protein_id=WP_080204020.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 65562 66926 . + . ID=gene-C9E95_RS21685;Name=C9E95_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21685;old_locus_tag=C9E95_22215 NZ_PYJW01000182.1 Protein Homology CDS 65562 66926 . + 0 ID=cds-WP_001000938.1;Parent=gene-C9E95_RS21685;Dbxref=GenBank:WP_001000938.1;Name=WP_001000938.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507029.1;locus_tag=C9E95_RS21685;product=MFS transporter;protein_id=WP_001000938.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 66973 67464 . - . ID=gene-C9E95_RS21690;Name=C9E95_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21690;old_locus_tag=C9E95_22220 NZ_PYJW01000182.1 Protein Homology CDS 66973 67464 . - 0 ID=cds-WP_001138913.1;Parent=gene-C9E95_RS21690;Dbxref=GenBank:WP_001138913.1;Name=WP_001138913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=C9E95_RS21690;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_001138913.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 67590 68501 . + . ID=gene-C9E95_RS21695;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=C9E95_RS21695;old_locus_tag=C9E95_22225 NZ_PYJW01000182.1 Protein Homology CDS 67590 68501 . + 0 ID=cds-WP_000705816.1;Parent=gene-C9E95_RS21695;Dbxref=GenBank:WP_000705816.1;Name=WP_000705816.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459429.1;locus_tag=C9E95_RS21695;product=2-dehydropantoate 2-reductase;protein_id=WP_000705816.1;transl_table=11 NZ_PYJW01000182.1 RefSeq gene 68464 69054 . + . ID=gene-C9E95_RS21700;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=C9E95_RS21700;old_locus_tag=C9E95_22230 NZ_PYJW01000182.1 Protein Homology CDS 68464 69054 . + 0 ID=cds-WP_001275809.1;Parent=gene-C9E95_RS21700;Dbxref=GenBank:WP_001275809.1;Name=WP_001275809.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459428.1;locus_tag=C9E95_RS21700;product=protein deglycase YajL;protein_id=WP_001275809.1;transl_table=11 ##sequence-region NZ_PYJW01000099.1 1 1232 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000099.1 RefSeq region 1 1232 . + . ID=NZ_PYJW01000099.1:1..1232;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000099.1 RefSeq gene 1 836 . - . ID=gene-C9E95_RS10895;Name=C9E95_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10895;old_locus_tag=C9E95_11175;partial=true;start_range=.,1 NZ_PYJW01000099.1 Protein Homology CDS 1 836 . - 0 ID=cds-WP_023993874.1;Parent=gene-C9E95_RS10895;Dbxref=GenBank:WP_023993874.1;Name=WP_023993874.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459551.1;locus_tag=C9E95_RS10895;partial=true;product=glycosyltransferase family 2 protein;protein_id=WP_023993874.1;start_range=.,1;transl_table=11 NZ_PYJW01000099.1 RefSeq gene 833 1195 . - . ID=gene-C9E95_RS10900;Name=C9E95_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10900;old_locus_tag=C9E95_11180 NZ_PYJW01000099.1 Protein Homology CDS 833 1195 . - 0 ID=cds-WP_000915523.1;Parent=gene-C9E95_RS10900;Dbxref=GenBank:WP_000915523.1;Name=WP_000915523.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459552.1;locus_tag=C9E95_RS10900;product=GtrA family protein;protein_id=WP_000915523.1;transl_table=11 ##sequence-region NZ_PYJW01000100.1 1 1221 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000100.1 RefSeq region 1 1221 . + . ID=NZ_PYJW01000100.1:1..1221;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000100.1 RefSeq gene 19 1005 . - . ID=gene-C9E95_RS10905;Name=C9E95_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10905;old_locus_tag=C9E95_11185 NZ_PYJW01000100.1 Protein Homology CDS 19 1005 . - 0 ID=cds-WP_000337539.1;Parent=gene-C9E95_RS10905;Dbxref=GenBank:WP_000337539.1;Name=WP_000337539.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000337539.1;locus_tag=C9E95_RS10905;product=IS110 family transposase;protein_id=WP_000337539.1;transl_table=11 ##sequence-region NZ_PYJW01000139.1 1 320 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000139.1 RefSeq region 1 320 . + . ID=NZ_PYJW01000139.1:1..320;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000139.1 RefSeq gene 1 235 . - . ID=gene-C9E95_RS16020;Name=C9E95_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16020;old_locus_tag=C9E95_16405;partial=true;start_range=.,1 NZ_PYJW01000139.1 Protein Homology CDS 1 235 . - 0 ID=cds-WP_047581463.1;Parent=gene-C9E95_RS16020;Dbxref=GenBank:WP_047581463.1;Name=WP_047581463.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026247.6;locus_tag=C9E95_RS16020;partial=true;product=EpsG family protein;protein_id=WP_047581463.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJW01000138.1 1 68495 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000138.1 RefSeq region 1 68495 . + . ID=NZ_PYJW01000138.1:1..68495;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000138.1 RefSeq gene 99 173 . + . ID=gene-C9E95_RS15690;Name=C9E95_RS15690;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS15690;old_locus_tag=C9E95_16070 NZ_PYJW01000138.1 tRNAscan-SE tRNA 99 173 . + . ID=rna-C9E95_RS15690;Parent=gene-C9E95_RS15690;anticodon=(pos:131..133);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS15690;product=tRNA-Gln NZ_PYJW01000138.1 tRNAscan-SE exon 99 173 . + . ID=exon-C9E95_RS15690-1;Parent=rna-C9E95_RS15690;anticodon=(pos:131..133);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS15690;product=tRNA-Gln NZ_PYJW01000138.1 RefSeq gene 304 1479 . - . ID=gene-C9E95_RS15695;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=C9E95_RS15695;old_locus_tag=C9E95_16075 NZ_PYJW01000138.1 Protein Homology CDS 304 1479 . - 0 ID=cds-WP_039589520.1;Parent=gene-C9E95_RS15695;Dbxref=GenBank:WP_039589520.1;Name=WP_039589520.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459663.1;locus_tag=C9E95_RS15695;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_039589520.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 1623 3047 . + . ID=gene-C9E95_RS15700;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=C9E95_RS15700;old_locus_tag=C9E95_16080 NZ_PYJW01000138.1 Protein Homology CDS 1623 3047 . + 0 ID=cds-WP_001519200.1;Parent=gene-C9E95_RS15700;Dbxref=GenBank:WP_001519200.1;Name=WP_001519200.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=C9E95_RS15700;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_001519200.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 3252 4298 . + . ID=gene-C9E95_RS15705;Name=C9E95_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15705;old_locus_tag=C9E95_16085 NZ_PYJW01000138.1 Protein Homology CDS 3252 4298 . + 0 ID=cds-WP_167850623.1;Parent=gene-C9E95_RS15705;Dbxref=GenBank:WP_167850623.1;Name=WP_167850623.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225825.1;locus_tag=C9E95_RS15705;product=PhoH family protein;protein_id=WP_167850623.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 4295 4768 . + . ID=gene-C9E95_RS15710;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=C9E95_RS15710;old_locus_tag=C9E95_16090 NZ_PYJW01000138.1 Protein Homology CDS 4295 4768 . + 0 ID=cds-WP_000084477.1;Parent=gene-C9E95_RS15710;Dbxref=GenBank:WP_000084477.1;Name=WP_000084477.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459660.1;locus_tag=C9E95_RS15710;product=rRNA maturation RNase YbeY;protein_id=WP_000084477.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 4926 5804 . + . ID=gene-C9E95_RS15715;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=C9E95_RS15715;old_locus_tag=C9E95_16095 NZ_PYJW01000138.1 Protein Homology CDS 4926 5804 . + 0 ID=cds-WP_001278612.1;Parent=gene-C9E95_RS15715;Dbxref=GenBank:WP_001278612.1;Name=WP_001278612.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459659.1;locus_tag=C9E95_RS15715;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_001278612.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 5824 7362 . + . ID=gene-C9E95_RS15720;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=C9E95_RS15720;old_locus_tag=C9E95_16100 NZ_PYJW01000138.1 Protein Homology CDS 5824 7362 . + 0 ID=cds-WP_080203783.1;Parent=gene-C9E95_RS15720;Dbxref=GenBank:WP_080203783.1;Name=WP_080203783.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459658.1;locus_tag=C9E95_RS15720;product=apolipoprotein N-acyltransferase;protein_id=WP_080203783.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 7717 8625 . + . ID=gene-C9E95_RS15725;Name=C9E95_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15725;old_locus_tag=C9E95_16105 NZ_PYJW01000138.1 Protein Homology CDS 7717 8625 . + 0 ID=cds-WP_001518176.1;Parent=gene-C9E95_RS15725;Dbxref=GenBank:WP_001518176.1;Name=WP_001518176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=C9E95_RS15725;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_001518176.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 8785 9525 . + . ID=gene-C9E95_RS15730;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=C9E95_RS15730;old_locus_tag=C9E95_16110 NZ_PYJW01000138.1 Protein Homology CDS 8785 9525 . + 0 ID=cds-WP_000020930.1;Parent=gene-C9E95_RS15730;Dbxref=GenBank:WP_000020930.1;Name=WP_000020930.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459656.1;locus_tag=C9E95_RS15730;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_000020930.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 9525 10199 . + . ID=gene-C9E95_RS15735;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=C9E95_RS15735;old_locus_tag=C9E95_16115 NZ_PYJW01000138.1 Protein Homology CDS 9525 10199 . + 0 ID=cds-WP_000272794.1;Parent=gene-C9E95_RS15735;Dbxref=GenBank:WP_000272794.1;Name=WP_000272794.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459655.1;locus_tag=C9E95_RS15735;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_000272794.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 10199 10924 . + . ID=gene-C9E95_RS15740;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=C9E95_RS15740;old_locus_tag=C9E95_16120 NZ_PYJW01000138.1 Protein Homology CDS 10199 10924 . + 0 ID=cds-WP_000631369.1;Parent=gene-C9E95_RS15740;Dbxref=GenBank:WP_000631369.1;Name=WP_000631369.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=C9E95_RS15740;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WP_000631369.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 11041 11976 . + . ID=gene-C9E95_RS15745;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=C9E95_RS15745;old_locus_tag=C9E95_16125 NZ_PYJW01000138.1 Protein Homology CDS 11041 11976 . + 0 ID=cds-WP_001207430.1;Parent=gene-C9E95_RS15745;Dbxref=GenBank:WP_001207430.1;Name=WP_001207430.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459653.1;locus_tag=C9E95_RS15745;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_001207430.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 12008 13246 . + . ID=gene-C9E95_RS15750;Name=C9E95_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15750;old_locus_tag=C9E95_16130 NZ_PYJW01000138.1 Protein Homology CDS 12008 13246 . + 0 ID=cds-WP_000498894.1;Parent=gene-C9E95_RS15750;Dbxref=GenBank:WP_000498894.1;Name=WP_000498894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459652.1;locus_tag=C9E95_RS15750;product=hypothetical protein;protein_id=WP_000498894.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 13322 15001 . + . ID=gene-C9E95_RS15755;Name=hscC;gbkey=Gene;gene=hscC;gene_biotype=protein_coding;locus_tag=C9E95_RS15755;old_locus_tag=C9E95_16135 NZ_PYJW01000138.1 Protein Homology CDS 13322 15001 . + 0 ID=cds-WP_000368025.1;Parent=gene-C9E95_RS15755;Dbxref=GenBank:WP_000368025.1;Name=WP_000368025.1;gbkey=CDS;gene=hscC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459651.1;locus_tag=C9E95_RS15755;product=molecular chaperone HscC;protein_id=WP_000368025.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 15023 16495 . - . ID=gene-C9E95_RS15760;Name=C9E95_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15760;old_locus_tag=C9E95_16140 NZ_PYJW01000138.1 Protein Homology CDS 15023 16495 . - 0 ID=cds-WP_023993208.1;Parent=gene-C9E95_RS15760;Dbxref=GenBank:WP_023993208.1;Name=WP_023993208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459650.1;locus_tag=C9E95_RS15760;product=J domain-containing protein;protein_id=WP_023993208.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 16492 17187 . - . ID=gene-C9E95_RS15765;Name=C9E95_RS15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15765;old_locus_tag=C9E95_16145 NZ_PYJW01000138.1 Protein Homology CDS 16492 17187 . - 0 ID=cds-WP_000356622.1;Parent=gene-C9E95_RS15765;Dbxref=GenBank:WP_000356622.1;Name=WP_000356622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459649.1;locus_tag=C9E95_RS15765;product=DUF1266 domain-containing protein;protein_id=WP_000356622.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 17199 18632 . - . ID=gene-C9E95_RS15770;Name=C9E95_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15770;old_locus_tag=C9E95_16150 NZ_PYJW01000138.1 Protein Homology CDS 17199 18632 . - 0 ID=cds-WP_000845201.1;Parent=gene-C9E95_RS15770;Dbxref=GenBank:WP_000845201.1;Name=WP_000845201.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459648.1;locus_tag=C9E95_RS15770;product=J domain-containing protein;protein_id=WP_000845201.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 18629 19336 . - . ID=gene-C9E95_RS15775;Name=C9E95_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15775;old_locus_tag=C9E95_16155 NZ_PYJW01000138.1 Protein Homology CDS 18629 19336 . - 0 ID=cds-WP_001575803.1;Parent=gene-C9E95_RS15775;Dbxref=GenBank:WP_001575803.1;Name=WP_001575803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459647.1;locus_tag=C9E95_RS15775;product=DUF1266 domain-containing protein;protein_id=WP_001575803.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 19461 20456 . + . ID=gene-C9E95_RS15780;Name=C9E95_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15780;old_locus_tag=C9E95_16160 NZ_PYJW01000138.1 Protein Homology CDS 19461 20456 . + 0 ID=cds-WP_023993209.1;Parent=gene-C9E95_RS15780;Dbxref=GenBank:WP_023993209.1;Name=WP_023993209.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459646.1;locus_tag=C9E95_RS15780;product=tetratricopeptide repeat protein;protein_id=WP_023993209.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 20495 20968 . - . ID=gene-C9E95_RS15785;Name=C9E95_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15785;old_locus_tag=C9E95_16165 NZ_PYJW01000138.1 Protein Homology CDS 20495 20968 . - 0 ID=cds-WP_001044885.1;Parent=gene-C9E95_RS15785;Dbxref=GenBank:WP_001044885.1;Name=WP_001044885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=C9E95_RS15785;product=zinc ribbon-containing protein;protein_id=WP_001044885.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 21061 22989 . - . ID=gene-C9E95_RS15790;Name=C9E95_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15790;old_locus_tag=C9E95_16170 NZ_PYJW01000138.1 Protein Homology CDS 21061 22989 . - 0 ID=cds-WP_001044182.1;Parent=gene-C9E95_RS15790;Dbxref=GenBank:WP_001044182.1;Name=WP_001044182.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459644.1;locus_tag=C9E95_RS15790;product=sigma-54 interaction domain-containing protein;protein_id=WP_001044182.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 23057 24010 . - . ID=gene-C9E95_RS15795;Name=C9E95_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15795;old_locus_tag=C9E95_16175 NZ_PYJW01000138.1 Protein Homology CDS 23057 24010 . - 0 ID=cds-WP_023993210.1;Parent=gene-C9E95_RS15795;Dbxref=GenBank:WP_023993210.1;Name=WP_023993210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459643.1;locus_tag=C9E95_RS15795;product=2-keto-3-deoxygluconate permease;protein_id=WP_023993210.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 24060 25232 . - . ID=gene-C9E95_RS15800;Name=C9E95_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15800;old_locus_tag=C9E95_16180 NZ_PYJW01000138.1 Protein Homology CDS 24060 25232 . - 0 ID=cds-WP_001670689.1;Parent=gene-C9E95_RS15800;Dbxref=GenBank:WP_001670689.1;Name=WP_001670689.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447101.1;locus_tag=C9E95_RS15800;product=UxaA family hydrolase;protein_id=WP_001670689.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 25249 25590 . - . ID=gene-C9E95_RS15805;Name=C9E95_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15805;old_locus_tag=C9E95_16185 NZ_PYJW01000138.1 Protein Homology CDS 25249 25590 . - 0 ID=cds-WP_001574029.1;Parent=gene-C9E95_RS15805;Dbxref=GenBank:WP_001574029.1;Name=WP_001574029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447100.1;locus_tag=C9E95_RS15805;product=UxaA family hydrolase;protein_id=WP_001574029.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 25827 28409 . + . ID=gene-C9E95_RS15810;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=C9E95_RS15810;old_locus_tag=C9E95_16190 NZ_PYJW01000138.1 Protein Homology CDS 25827 28409 . + 0 ID=cds-WP_023993211.1;Parent=gene-C9E95_RS15810;Dbxref=GenBank:WP_023993211.1;Name=WP_023993211.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=C9E95_RS15810;product=leucine--tRNA ligase;protein_id=WP_023993211.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 28424 29014 . + . ID=gene-C9E95_RS15815;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=C9E95_RS15815;old_locus_tag=C9E95_16195 NZ_PYJW01000138.1 Protein Homology CDS 28424 29014 . + 0 ID=cds-WP_001269950.1;Parent=gene-C9E95_RS15815;Dbxref=GenBank:WP_001269950.1;Name=WP_001269950.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459639.1;locus_tag=C9E95_RS15815;product=LPS assembly lipoprotein LptE;protein_id=WP_001269950.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 29014 30045 . + . ID=gene-C9E95_RS15820;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=C9E95_RS15820;old_locus_tag=C9E95_16200 NZ_PYJW01000138.1 Protein Homology CDS 29014 30045 . + 0 ID=cds-WP_000620491.1;Parent=gene-C9E95_RS15820;Dbxref=GenBank:WP_000620491.1;Name=WP_000620491.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459638.1;locus_tag=C9E95_RS15820;product=DNA polymerase III subunit delta;protein_id=WP_000620491.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 30047 30688 . + . ID=gene-C9E95_RS15825;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=C9E95_RS15825;old_locus_tag=C9E95_16205 NZ_PYJW01000138.1 Protein Homology CDS 30047 30688 . + 0 ID=cds-WP_001518902.1;Parent=gene-C9E95_RS15825;Dbxref=GenBank:WP_001518902.1;Name=WP_001518902.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459637.1;locus_tag=C9E95_RS15825;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_001518902.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 30663 31757 . - . ID=gene-C9E95_RS15830;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=C9E95_RS15830;old_locus_tag=C9E95_16210 NZ_PYJW01000138.1 Protein Homology CDS 30663 31757 . - 0 ID=cds-WP_001173259.1;Parent=gene-C9E95_RS15830;Dbxref=GenBank:WP_001173259.1;Name=WP_001173259.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;gene=cobD;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459636.1;locus_tag=C9E95_RS15830;product=threonine-phosphate decarboxylase CobD;protein_id=WP_001173259.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 31854 32462 . + . ID=gene-C9E95_RS15835;Name=C9E95_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15835;old_locus_tag=C9E95_16215 NZ_PYJW01000138.1 Protein Homology CDS 31854 32462 . + 0 ID=cds-WP_023993213.1;Parent=gene-C9E95_RS15835;Dbxref=GenBank:WP_023993213.1;Name=WP_023993213.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459635.1;locus_tag=C9E95_RS15835;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_023993213.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 32791 33108 . + . ID=gene-C9E95_RS15840;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=C9E95_RS15840;old_locus_tag=C9E95_16220 NZ_PYJW01000138.1 Protein Homology CDS 32791 33108 . + 0 ID=cds-WP_001161670.1;Parent=gene-C9E95_RS15840;Dbxref=GenBank:WP_001161670.1;Name=WP_001161670.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=C9E95_RS15840;product=ribosome silencing factor;protein_id=WP_001161670.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 33112 33579 . + . ID=gene-C9E95_RS15845;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=C9E95_RS15845;old_locus_tag=C9E95_16225 NZ_PYJW01000138.1 Protein Homology CDS 33112 33579 . + 0 ID=cds-WP_000776107.1;Parent=gene-C9E95_RS15845;Dbxref=GenBank:WP_000776107.1;Name=WP_000776107.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=C9E95_RS15845;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_000776107.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 33610 35511 . + . ID=gene-C9E95_RS15850;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=C9E95_RS15850;old_locus_tag=C9E95_16230 NZ_PYJW01000138.1 Protein Homology CDS 33610 35511 . + 0 ID=cds-WP_000828700.1;Parent=gene-C9E95_RS15850;Dbxref=GenBank:WP_000828700.1;Name=WP_000828700.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459632.1;locus_tag=C9E95_RS15850;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_000828700.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 35514 36626 . + . ID=gene-C9E95_RS15855;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=C9E95_RS15855;old_locus_tag=C9E95_16235 NZ_PYJW01000138.1 Protein Homology CDS 35514 36626 . + 0 ID=cds-WP_000131713.1;Parent=gene-C9E95_RS15855;Dbxref=GenBank:WP_000131713.1;Name=WP_000131713.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=C9E95_RS15855;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_000131713.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 36637 37770 . + . ID=gene-C9E95_RS15860;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=C9E95_RS15860;old_locus_tag=C9E95_16240 NZ_PYJW01000138.1 Protein Homology CDS 36637 37770 . + 0 ID=cds-WP_023993214.1;Parent=gene-C9E95_RS15860;Dbxref=GenBank:WP_023993214.1;Name=WP_023993214.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459630.1;locus_tag=C9E95_RS15860;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_023993214.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 37910 39121 . + . ID=gene-C9E95_RS15865;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=C9E95_RS15865;old_locus_tag=C9E95_16245 NZ_PYJW01000138.1 Protein Homology CDS 37910 39121 . + 0 ID=cds-WP_000858711.1;Parent=gene-C9E95_RS15865;Dbxref=GenBank:WP_000858711.1;Name=WP_000858711.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459629.1;locus_tag=C9E95_RS15865;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_000858711.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 39229 39492 . + . ID=gene-C9E95_RS15870;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=C9E95_RS15870;old_locus_tag=C9E95_16250 NZ_PYJW01000138.1 Protein Homology CDS 39229 39492 . + 0 ID=cds-WP_000850547.1;Parent=gene-C9E95_RS15870;Dbxref=GenBank:WP_000850547.1;Name=WP_000850547.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=C9E95_RS15870;product=DUF493 family protein YbeD;protein_id=WP_000850547.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 39592 40233 . + . ID=gene-C9E95_RS15875;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=C9E95_RS15875;old_locus_tag=C9E95_16255 NZ_PYJW01000138.1 Protein Homology CDS 39592 40233 . + 0 ID=cds-WP_000284009.1;Parent=gene-C9E95_RS15875;Dbxref=GenBank:WP_000284009.1;Name=WP_000284009.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=C9E95_RS15875;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_000284009.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 40535 41488 . + . ID=gene-C9E95_RS15880;Name=C9E95_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15880;old_locus_tag=C9E95_16260 NZ_PYJW01000138.1 Protein Homology CDS 40535 41488 . + 0 ID=cds-WP_023993215.1;Parent=gene-C9E95_RS15880;Dbxref=GenBank:WP_023993215.1;Name=WP_023993215.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459626.1;locus_tag=C9E95_RS15880;product=YbeF family transcriptional regulator;protein_id=WP_023993215.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 41694 42659 . + . ID=gene-C9E95_RS15885;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=C9E95_RS15885;old_locus_tag=C9E95_16265 NZ_PYJW01000138.1 Protein Homology CDS 41694 42659 . + 0 ID=cds-WP_000042640.1;Parent=gene-C9E95_RS15885;Dbxref=GenBank:WP_000042640.1;Name=WP_000042640.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=C9E95_RS15885;product=lipoyl synthase;protein_id=WP_000042640.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 42745 42948 . - . ID=gene-C9E95_RS15890;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=C9E95_RS15890;old_locus_tag=C9E95_16270 NZ_PYJW01000138.1 Protein Homology CDS 42745 42948 . - 0 ID=cds-WP_000503938.1;Parent=gene-C9E95_RS15890;Dbxref=GenBank:WP_000503938.1;Name=WP_000503938.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459624.1;locus_tag=C9E95_RS15890;product=twin-arginine translocase subunit TatE;protein_id=WP_000503938.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 43077 43865 . - . ID=gene-C9E95_RS15895;Name=C9E95_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15895;old_locus_tag=C9E95_16275 NZ_PYJW01000138.1 Protein Homology CDS 43077 43865 . - 0 ID=cds-WP_023993216.1;Parent=gene-C9E95_RS15895;Dbxref=GenBank:WP_023993216.1;Name=WP_023993216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459623.1;locus_tag=C9E95_RS15895;product=deaminated glutathione amidase;protein_id=WP_023993216.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 43956 44339 . + . ID=gene-C9E95_RS15900;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=C9E95_RS15900;old_locus_tag=C9E95_16280 NZ_PYJW01000138.1 Protein Homology CDS 43956 44339 . + 0 ID=cds-WP_000939753.1;Parent=gene-C9E95_RS15900;Dbxref=GenBank:WP_000939753.1;Name=WP_000939753.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459622.1;locus_tag=C9E95_RS15900;product=fluoride efflux transporter CrcB;protein_id=WP_000939753.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 44397 44606 . - . ID=gene-C9E95_RS15905;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=C9E95_RS15905;old_locus_tag=C9E95_16285 NZ_PYJW01000138.1 Protein Homology CDS 44397 44606 . - 0 ID=cds-WP_000034826.1;Parent=gene-C9E95_RS15905;Dbxref=GenBank:WP_000034826.1;Name=WP_000034826.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459621.1;locus_tag=C9E95_RS15905;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000034826.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 44794 45366 . - . ID=gene-C9E95_RS15910;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=C9E95_RS15910;old_locus_tag=C9E95_16290 NZ_PYJW01000138.1 Protein Homology CDS 44794 45366 . - 0 ID=cds-WP_001623090.1;Parent=gene-C9E95_RS15910;Dbxref=GenBank:WP_001623090.1;Name=WP_001623090.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459620.1;locus_tag=C9E95_RS15910;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_001623090.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 45743 47128 . + . ID=gene-C9E95_RS15915;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=C9E95_RS15915;old_locus_tag=C9E95_16295 NZ_PYJW01000138.1 Protein Homology CDS 45743 47128 . + 0 ID=cds-WP_000958619.1;Parent=gene-C9E95_RS15915;Dbxref=GenBank:WP_000958619.1;Name=WP_000958619.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459619.1;locus_tag=C9E95_RS15915;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000958619.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 47182 47862 . - . ID=gene-C9E95_RS15920;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=C9E95_RS15920;old_locus_tag=C9E95_16300 NZ_PYJW01000138.1 Protein Homology CDS 47182 47862 . - 0 ID=cds-WP_000138778.1;Parent=gene-C9E95_RS15920;Dbxref=GenBank:WP_000138778.1;Name=WP_000138778.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459618.1;locus_tag=C9E95_RS15920;product=two-component response regulator DpiA;protein_id=WP_000138778.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 47831 49492 . - . ID=gene-C9E95_RS15925;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=C9E95_RS15925;old_locus_tag=C9E95_16305 NZ_PYJW01000138.1 Protein Homology CDS 47831 49492 . - 0 ID=cds-WP_039585772.1;Parent=gene-C9E95_RS15925;Dbxref=GenBank:WP_039585772.1;Name=WP_039585772.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459617.1;locus_tag=C9E95_RS15925;product=sensor histidine kinase DpiB;protein_id=WP_039585772.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 49877 50953 . + . ID=gene-C9E95_RS15930;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=C9E95_RS15930;old_locus_tag=C9E95_16310 NZ_PYJW01000138.1 Protein Homology CDS 49877 50953 . + 0 ID=cds-WP_000467872.1;Parent=gene-C9E95_RS15930;Dbxref=GenBank:WP_000467872.1;Name=WP_000467872.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459616.1;locus_tag=C9E95_RS15930;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_000467872.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 50950 51246 . + . ID=gene-C9E95_RS15935;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=C9E95_RS15935;old_locus_tag=C9E95_16315 NZ_PYJW01000138.1 Protein Homology CDS 50950 51246 . + 0 ID=cds-WP_000700679.1;Parent=gene-C9E95_RS15935;Dbxref=GenBank:WP_000700679.1;Name=WP_000700679.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459615.1;locus_tag=C9E95_RS15935;product=citrate lyase acyl carrier protein;protein_id=WP_000700679.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 51243 52151 . + . ID=gene-C9E95_RS15940;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=C9E95_RS15940;old_locus_tag=C9E95_16320 NZ_PYJW01000138.1 Protein Homology CDS 51243 52151 . + 0 ID=cds-WP_000622342.1;Parent=gene-C9E95_RS15940;Dbxref=GenBank:WP_000622342.1;Name=WP_000622342.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459614.1;locus_tag=C9E95_RS15940;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_000622342.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 52161 53690 . + . ID=gene-C9E95_RS15945;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=C9E95_RS15945;old_locus_tag=C9E95_16325 NZ_PYJW01000138.1 Protein Homology CDS 52161 53690 . + 0 ID=cds-WP_023993219.1;Parent=gene-C9E95_RS15945;Dbxref=GenBank:WP_023993219.1;Name=WP_023993219.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459613.1;locus_tag=C9E95_RS15945;product=citrate lyase subunit alpha;protein_id=WP_023993219.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 53694 54245 . + . ID=gene-C9E95_RS15950;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=C9E95_RS15950;old_locus_tag=C9E95_16330 NZ_PYJW01000138.1 Protein Homology CDS 53694 54245 . + 0 ID=cds-WP_001236072.1;Parent=gene-C9E95_RS15950;Dbxref=GenBank:WP_001236072.1;Name=WP_001236072.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459612.1;locus_tag=C9E95_RS15950;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_001236072.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 54217 55113 . + . ID=gene-C9E95_RS15955;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=C9E95_RS15955;old_locus_tag=C9E95_16335 NZ_PYJW01000138.1 Protein Homology CDS 54217 55113 . + 0 ID=cds-WP_000982655.1;Parent=gene-C9E95_RS15955;Dbxref=GenBank:WP_000982655.1;Name=WP_000982655.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459611.1;locus_tag=C9E95_RS15955;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_000982655.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 55151 56614 . + . ID=gene-C9E95_RS15960;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=C9E95_RS15960;old_locus_tag=C9E95_16340 NZ_PYJW01000138.1 Protein Homology CDS 55151 56614 . + 0 ID=cds-WP_000059029.1;Parent=gene-C9E95_RS15960;Dbxref=GenBank:WP_000059029.1;Name=WP_000059029.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459610.1;locus_tag=C9E95_RS15960;product=citrate/succinate antiporter CitT;protein_id=WP_000059029.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 56724 57530 . + . ID=gene-C9E95_RS15965;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=C9E95_RS15965;old_locus_tag=C9E95_16345 NZ_PYJW01000138.1 Protein Homology CDS 56724 57530 . + 0 ID=cds-WP_001092585.1;Parent=gene-C9E95_RS15965;Dbxref=GenBank:WP_001092585.1;Name=WP_001092585.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459609.1;locus_tag=C9E95_RS15965;product=ribonuclease I;protein_id=WP_001092585.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 57765 58175 . + . ID=gene-C9E95_RS15970;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=C9E95_RS15970;old_locus_tag=C9E95_16355 NZ_PYJW01000138.1 Protein Homology CDS 57765 58175 . + 0 ID=cds-WP_000089748.1;Parent=gene-C9E95_RS15970;Dbxref=GenBank:WP_000089748.1;Name=WP_000089748.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459608.1;locus_tag=C9E95_RS15970;product=nucleoside diphosphate kinase regulator;protein_id=WP_000089748.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 58258 59496 . - . ID=gene-C9E95_RS15975;Name=C9E95_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15975;old_locus_tag=C9E95_16360 NZ_PYJW01000138.1 Protein Homology CDS 58258 59496 . - 0 ID=cds-WP_000646109.1;Parent=gene-C9E95_RS15975;Dbxref=GenBank:WP_000646109.1;Name=WP_000646109.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459607.1;locus_tag=C9E95_RS15975;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_000646109.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 59719 60147 . + . ID=gene-C9E95_RS15980;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=C9E95_RS15980;old_locus_tag=C9E95_16365 NZ_PYJW01000138.1 Protein Homology CDS 59719 60147 . + 0 ID=cds-WP_000278499.1;Parent=gene-C9E95_RS15980;Dbxref=GenBank:WP_000278499.1;Name=WP_000278499.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459606.1;locus_tag=C9E95_RS15980;product=universal stress protein UspG;protein_id=WP_000278499.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 60215 60982 . - . ID=gene-C9E95_RS15985;Name=C9E95_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15985;old_locus_tag=C9E95_16370 NZ_PYJW01000138.1 Protein Homology CDS 60215 60982 . - 0 ID=cds-WP_023993222.1;Parent=gene-C9E95_RS15985;Dbxref=GenBank:WP_023993222.1;Name=WP_023993222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459605.1;locus_tag=C9E95_RS15985;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_023993222.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 60982 61539 . - . ID=gene-C9E95_RS15990;Name=C9E95_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15990;old_locus_tag=C9E95_16375 NZ_PYJW01000138.1 Protein Homology CDS 60982 61539 . - 0 ID=cds-WP_001250381.1;Parent=gene-C9E95_RS15990;Dbxref=GenBank:WP_001250381.1;Name=WP_001250381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459604.1;locus_tag=C9E95_RS15990;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001250381.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 61536 63815 . - . ID=gene-C9E95_RS15995;Name=C9E95_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15995;old_locus_tag=C9E95_16380 NZ_PYJW01000138.1 Protein Homology CDS 61536 63815 . - 0 ID=cds-WP_023993223.1;Parent=gene-C9E95_RS15995;Dbxref=GenBank:WP_023993223.1;Name=WP_023993223.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459603.1;locus_tag=C9E95_RS15995;product=molybdopterin-dependent oxidoreductase;protein_id=WP_023993223.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 63808 64368 . - . ID=gene-C9E95_RS16000;Name=C9E95_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16000;old_locus_tag=C9E95_16385 NZ_PYJW01000138.1 Protein Homology CDS 63808 64368 . - 0 ID=cds-WP_023993224.1;Parent=gene-C9E95_RS16000;Dbxref=GenBank:WP_023993224.1;Name=WP_023993224.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459602.1;locus_tag=C9E95_RS16000;product=TorD/DmsD family molecular chaperone;protein_id=WP_023993224.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 64701 66266 . - . ID=gene-C9E95_RS16005;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=C9E95_RS16005;old_locus_tag=C9E95_16390 NZ_PYJW01000138.1 Protein Homology CDS 64701 66266 . - 0 ID=cds-WP_000887644.1;Parent=gene-C9E95_RS16005;Dbxref=GenBank:WP_000887644.1;Name=WP_000887644.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459601.1;locus_tag=C9E95_RS16005;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000887644.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 66508 67071 . - . ID=gene-C9E95_RS16010;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=C9E95_RS16010;old_locus_tag=C9E95_16395 NZ_PYJW01000138.1 Protein Homology CDS 66508 67071 . - 0 ID=cds-WP_000052802.1;Parent=gene-C9E95_RS16010;Dbxref=GenBank:WP_000052802.1;Name=WP_000052802.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=C9E95_RS16010;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052802.1;transl_table=11 NZ_PYJW01000138.1 RefSeq gene 67512 68258 . + . ID=gene-C9E95_RS16015;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=C9E95_RS16015;old_locus_tag=C9E95_16400 NZ_PYJW01000138.1 Protein Homology CDS 67512 68258 . + 0 ID=cds-WP_000597128.1;Parent=gene-C9E95_RS16015;Dbxref=GenBank:WP_000597128.1;Name=WP_000597128.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459599.1;locus_tag=C9E95_RS16015;product=thiol:disulfide interchange protein DsbG;protein_id=WP_000597128.1;transl_table=11 ##sequence-region NZ_PYJW01000076.1 1 1104 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000076.1 RefSeq region 1 1104 . + . ID=NZ_PYJW01000076.1:1..1104;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000076.1 RefSeq gene 182 1104 . - . ID=gene-C9E95_RS07795;Name=C9E95_RS07795;end_range=1104,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07795;old_locus_tag=C9E95_07975;partial=true NZ_PYJW01000076.1 Protein Homology CDS 182 1104 . - 2 ID=cds-WP_135369828.1;Parent=gene-C9E95_RS07795;Dbxref=GenBank:WP_135369828.1;Name=WP_135369828.1;end_range=1104,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000924686.1;locus_tag=C9E95_RS07795;partial=true;product=glycosyltransferase family 1 protein;protein_id=WP_135369828.1;transl_table=11 ##sequence-region NZ_PYJW01000060.1 1 63101 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000060.1 RefSeq region 1 63101 . + . ID=NZ_PYJW01000060.1:1..63101;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000060.1 RefSeq gene 420 905 . + . ID=gene-C9E95_RS05990;Name=C9E95_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05990;old_locus_tag=C9E95_06140 NZ_PYJW01000060.1 Protein Homology CDS 420 905 . + 0 ID=cds-WP_080203950.1;Parent=gene-C9E95_RS05990;Dbxref=GenBank:WP_080203950.1;Name=WP_080203950.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462046.1;locus_tag=C9E95_RS05990;product=Hcp family type VI secretion system effector;protein_id=WP_080203950.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 905 1285 . + . ID=gene-C9E95_RS05995;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=C9E95_RS05995;old_locus_tag=C9E95_06145 NZ_PYJW01000060.1 Protein Homology CDS 905 1285 . + 0 ID=cds-WP_000988938.1;Parent=gene-C9E95_RS05995;Dbxref=GenBank:WP_000988938.1;Name=WP_000988938.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462045.1;locus_tag=C9E95_RS05995;product=anti-adapter protein IraD;protein_id=WP_000988938.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 1421 2905 . - . ID=gene-C9E95_RS06000;Name=C9E95_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06000;old_locus_tag=C9E95_06150 NZ_PYJW01000060.1 Protein Homology CDS 1421 2905 . - 0 ID=cds-WP_080203951.1;Parent=gene-C9E95_RS06000;Dbxref=GenBank:WP_080203951.1;Name=WP_080203951.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462044.1;locus_tag=C9E95_RS06000;product=aldehyde dehydrogenase family protein;protein_id=WP_080203951.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 3067 4368 . + . ID=gene-C9E95_RS06005;Name=C9E95_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06005;old_locus_tag=C9E95_06155 NZ_PYJW01000060.1 Protein Homology CDS 3067 4368 . + 0 ID=cds-WP_001092814.1;Parent=gene-C9E95_RS06005;Dbxref=GenBank:WP_001092814.1;Name=WP_001092814.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462043.1;locus_tag=C9E95_RS06005;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_001092814.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 4383 4757 . + . ID=gene-C9E95_RS06010;Name=C9E95_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06010;old_locus_tag=C9E95_06160 NZ_PYJW01000060.1 Protein Homology CDS 4383 4757 . + 0 ID=cds-WP_000542980.1;Parent=gene-C9E95_RS06010;Dbxref=GenBank:WP_000542980.1;Name=WP_000542980.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462042.1;locus_tag=C9E95_RS06010;product=cupin domain-containing protein;protein_id=WP_000542980.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 4966 6465 . + . ID=gene-C9E95_RS06015;Name=C9E95_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06015;old_locus_tag=C9E95_06165 NZ_PYJW01000060.1 Protein Homology CDS 4966 6465 . + 0 ID=cds-WP_000475960.1;Parent=gene-C9E95_RS06015;Dbxref=GenBank:WP_000475960.1;Name=WP_000475960.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462041.1;locus_tag=C9E95_RS06015;product=APC family permease;protein_id=WP_000475960.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 6443 7000 . + . ID=gene-C9E95_RS06020;Name=C9E95_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06020;old_locus_tag=C9E95_06170 NZ_PYJW01000060.1 Protein Homology CDS 6443 7000 . + 0 ID=cds-WP_080203952.1;Parent=gene-C9E95_RS06020;Dbxref=GenBank:WP_080203952.1;Name=WP_080203952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462040.1;locus_tag=C9E95_RS06020;product=DUF3156 family protein;protein_id=WP_080203952.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 7104 7787 . - . ID=gene-C9E95_RS06025;Name=C9E95_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06025;old_locus_tag=C9E95_06175 NZ_PYJW01000060.1 Protein Homology CDS 7104 7787 . - 0 ID=cds-WP_001275358.1;Parent=gene-C9E95_RS06025;Dbxref=GenBank:WP_001275358.1;Name=WP_001275358.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462039.1;locus_tag=C9E95_RS06025;product=helix-turn-helix transcriptional regulator;protein_id=WP_001275358.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 8299 9483 . + . ID=gene-C9E95_RS06030;Name=C9E95_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06030;old_locus_tag=C9E95_06180 NZ_PYJW01000060.1 Protein Homology CDS 8299 9483 . + 0 ID=cds-WP_080091770.1;Parent=gene-C9E95_RS06030;Dbxref=GenBank:WP_080091770.1;Name=WP_080091770.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462038.1;locus_tag=C9E95_RS06030;product=anaerobic sulfatase maturase;protein_id=WP_080091770.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 9552 11291 . + . ID=gene-C9E95_RS06035;Name=C9E95_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06035;old_locus_tag=C9E95_06185 NZ_PYJW01000060.1 Protein Homology CDS 9552 11291 . + 0 ID=cds-WP_080203953.1;Parent=gene-C9E95_RS06035;Dbxref=GenBank:WP_080203953.1;Name=WP_080203953.1;Ontology_term=GO:0004065,GO:0008081,GO:0046872;gbkey=CDS;go_function=arylsulfatase activity|0004065||IEA,phosphoric diester hydrolase activity|0008081||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462037.1;locus_tag=C9E95_RS06035;product=arylsulfatase;protein_id=WP_080203953.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 11339 12217 . - . ID=gene-C9E95_RS06040;Name=ripR;gbkey=Gene;gene=ripR;gene_biotype=protein_coding;locus_tag=C9E95_RS06040;old_locus_tag=C9E95_06190 NZ_PYJW01000060.1 Protein Homology CDS 11339 12217 . - 0 ID=cds-WP_000423170.1;Parent=gene-C9E95_RS06040;Dbxref=GenBank:WP_000423170.1;Name=WP_000423170.1;gbkey=CDS;gene=ripR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462036.1;locus_tag=C9E95_RS06040;product=itaconate degradation transcriptional regulator RipR;protein_id=WP_000423170.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 12309 13151 . + . ID=gene-C9E95_RS06045;Name=ripC;gbkey=Gene;gene=ripC;gene_biotype=protein_coding;locus_tag=C9E95_RS06045;old_locus_tag=C9E95_06195 NZ_PYJW01000060.1 Protein Homology CDS 12309 13151 . + 0 ID=cds-WP_001112897.1;Parent=gene-C9E95_RS06045;Dbxref=GenBank:WP_001112897.1;Name=WP_001112897.1;Note=Third step in itaconate degradation.;gbkey=CDS;gene=ripC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462035.1;locus_tag=C9E95_RS06045;product=itaconate degradation C-C-lyase RipC;protein_id=WP_001112897.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 13175 13702 . + . ID=gene-C9E95_RS06050;Name=ripB;gbkey=Gene;gene=ripB;gene_biotype=protein_coding;locus_tag=C9E95_RS06050;old_locus_tag=C9E95_06200 NZ_PYJW01000060.1 Protein Homology CDS 13175 13702 . + 0 ID=cds-WP_001037830.1;Parent=gene-C9E95_RS06050;Dbxref=GenBank:WP_001037830.1;Name=WP_001037830.1;Note=Second step in itaconate degradation.;gbkey=CDS;gene=ripB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462034.1;locus_tag=C9E95_RS06050;product=(R)-specific enoyl-CoA hydratase RipB/Ich;protein_id=WP_001037830.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 13727 15052 . + . ID=gene-C9E95_RS06055;Name=ripA;gbkey=Gene;gene=ripA;gene_biotype=protein_coding;gene_synonym=ict;locus_tag=C9E95_RS06055;old_locus_tag=C9E95_06205 NZ_PYJW01000060.1 Protein Homology CDS 13727 15052 . + 0 ID=cds-WP_080203954.1;Parent=gene-C9E95_RS06055;Dbxref=GenBank:WP_080203954.1;Name=WP_080203954.1;Note=Transfers CoA from succinate to itaconate;gbkey=CDS;gene=ripA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462033.1;locus_tag=C9E95_RS06055;product=itaconate CoA-transferase RipA/Ict;protein_id=WP_080203954.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 15117 15497 . + . ID=gene-C9E95_RS06060;Name=C9E95_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06060;old_locus_tag=C9E95_06210 NZ_PYJW01000060.1 Protein Homology CDS 15117 15497 . + 0 ID=cds-WP_023993933.1;Parent=gene-C9E95_RS06060;Dbxref=GenBank:WP_023993933.1;Name=WP_023993933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582669.1;locus_tag=C9E95_RS06060;product=VOC family protein;protein_id=WP_023993933.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 15870 18101 . - . ID=gene-C9E95_RS23160;Name=C9E95_RS23160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23160 NZ_PYJW01000060.1 Protein Homology CDS 15870 18101 . - 0 ID=cds-WP_023993934.1;Parent=gene-C9E95_RS23160;Dbxref=GenBank:WP_023993934.1;Name=WP_023993934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000612776.1;locus_tag=C9E95_RS23160;product=hypothetical protein;protein_id=WP_023993934.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 18098 22792 . - . ID=gene-C9E95_RS06070;Name=C9E95_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06070;old_locus_tag=C9E95_06220 NZ_PYJW01000060.1 Protein Homology CDS 18098 22792 . - 0 ID=cds-WP_080203955.1;Parent=gene-C9E95_RS06070;Dbxref=GenBank:WP_080203955.1;Name=WP_080203955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001694470.1;locus_tag=C9E95_RS06070;product=hypothetical protein;protein_id=WP_080203955.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 22804 25002 . - . ID=gene-C9E95_RS06075;Name=C9E95_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06075;old_locus_tag=C9E95_06225 NZ_PYJW01000060.1 Protein Homology CDS 22804 25002 . - 0 ID=cds-WP_023993936.1;Parent=gene-C9E95_RS06075;Dbxref=GenBank:WP_023993936.1;Name=WP_023993936.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000980865.1;locus_tag=C9E95_RS06075;product=DEAD/DEAH box helicase;protein_id=WP_023993936.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 24999 26315 . - . ID=gene-C9E95_RS06080;Name=C9E95_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06080;old_locus_tag=C9E95_06230 NZ_PYJW01000060.1 Protein Homology CDS 24999 26315 . - 0 ID=cds-WP_023993937.1;Parent=gene-C9E95_RS06080;Dbxref=GenBank:WP_023993937.1;Name=WP_023993937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000117530.1;locus_tag=C9E95_RS06080;product=ATP-binding protein;protein_id=WP_023993937.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 26319 28646 . - . ID=gene-C9E95_RS06085;Name=C9E95_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06085;old_locus_tag=C9E95_06235 NZ_PYJW01000060.1 Protein Homology CDS 26319 28646 . - 0 ID=cds-WP_023994392.1;Parent=gene-C9E95_RS06085;Dbxref=GenBank:WP_023994392.1;Name=WP_023994392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421673.1;locus_tag=C9E95_RS06085;product=TerB N-terminal domain-containing protein;protein_id=WP_023994392.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 28830 29897 . - . ID=gene-C9E95_RS06090;Name=C9E95_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06090;old_locus_tag=C9E95_06240 NZ_PYJW01000060.1 Protein Homology CDS 28830 29897 . - 0 ID=cds-WP_023993939.1;Parent=gene-C9E95_RS06090;Dbxref=GenBank:WP_023993939.1;Name=WP_023993939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001313296.1;locus_tag=C9E95_RS06090;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_023993939.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 29897 30514 . - . ID=gene-C9E95_RS06095;Name=C9E95_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06095;old_locus_tag=C9E95_06245 NZ_PYJW01000060.1 Protein Homology CDS 29897 30514 . - 0 ID=cds-WP_023202708.1;Parent=gene-C9E95_RS06095;Dbxref=GenBank:WP_023202708.1;Name=WP_023202708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123862.1;locus_tag=C9E95_RS06095;product=DUF6088 family protein;protein_id=WP_023202708.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 30713 31165 . + . ID=gene-C9E95_RS06100;Name=C9E95_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06100;old_locus_tag=C9E95_06250 NZ_PYJW01000060.1 Protein Homology CDS 30713 31165 . + 0 ID=cds-WP_023993940.1;Parent=gene-C9E95_RS06100;Dbxref=GenBank:WP_023993940.1;Name=WP_023993940.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024565.6;locus_tag=C9E95_RS06100;product=AAA family ATPase;protein_id=WP_023993940.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 31749 33068 . - . ID=gene-C9E95_RS06110;Name=C9E95_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06110;old_locus_tag=C9E95_06260 NZ_PYJW01000060.1 Protein Homology CDS 31749 33068 . - 0 ID=cds-WP_023994395.1;Parent=gene-C9E95_RS06110;Dbxref=GenBank:WP_023994395.1;Name=WP_023994395.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534139.1;locus_tag=C9E95_RS06110;product=ferredoxin reductase family protein;protein_id=WP_023994395.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 33144 33407 . - . ID=gene-C9E95_RS06115;Name=C9E95_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06115;old_locus_tag=C9E95_06265 NZ_PYJW01000060.1 Protein Homology CDS 33144 33407 . - 0 ID=cds-WP_023994396.1;Parent=gene-C9E95_RS06115;Dbxref=GenBank:WP_023994396.1;Name=WP_023994396.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018986.6;locus_tag=C9E95_RS06115;product=YdgH/BhsA/McbA-like domain containing protein;protein_id=WP_023994396.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 33433 34056 . - . ID=gene-C9E95_RS06120;Name=C9E95_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06120;old_locus_tag=C9E95_06270 NZ_PYJW01000060.1 Protein Homology CDS 33433 34056 . - 0 ID=cds-WP_023232633.1;Parent=gene-C9E95_RS06120;Dbxref=GenBank:WP_023232633.1;Name=WP_023232633.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0016491,GO:0050136,GO:0050446;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,azobenzene reductase activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000697438.1;locus_tag=C9E95_RS06120;product=FMN-dependent NADH-azoreductase;protein_id=WP_023232633.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 34157 35062 . + . ID=gene-C9E95_RS06125;Name=C9E95_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06125;old_locus_tag=C9E95_06275 NZ_PYJW01000060.1 Protein Homology CDS 34157 35062 . + 0 ID=cds-WP_001650656.1;Parent=gene-C9E95_RS06125;Dbxref=GenBank:WP_001650656.1;Name=WP_001650656.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441073.1;locus_tag=C9E95_RS06125;product=LysR family transcriptional regulator;protein_id=WP_001650656.1;transl_table=11 NZ_PYJW01000060.1 RefSeq pseudogene 35359 35586 . - . ID=gene-C9E95_RS23425;Name=C9E95_RS23425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23425;old_locus_tag=C9E95_06280;partial=true;pseudo=true;start_range=.,35359 NZ_PYJW01000060.1 Protein Homology CDS 35359 35586 . - 0 ID=cds-C9E95_RS23425;Parent=gene-C9E95_RS23425;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005975783.1;locus_tag=C9E95_RS23425;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;start_range=.,35359;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 35746 35821 . - . ID=gene-C9E95_RS06135;Name=C9E95_RS06135;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS06135;old_locus_tag=C9E95_06285 NZ_PYJW01000060.1 tRNAscan-SE tRNA 35746 35821 . - . ID=rna-C9E95_RS06135;Parent=gene-C9E95_RS06135;anticodon=(pos:complement(35786..35788));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS06135;product=tRNA-Phe NZ_PYJW01000060.1 tRNAscan-SE exon 35746 35821 . - . ID=exon-C9E95_RS06135-1;Parent=rna-C9E95_RS06135;anticodon=(pos:complement(35786..35788));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS06135;product=tRNA-Phe NZ_PYJW01000060.1 RefSeq gene 35927 36634 . - . ID=gene-C9E95_RS06140;Name=C9E95_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06140;old_locus_tag=C9E95_06290 NZ_PYJW01000060.1 Protein Homology CDS 35927 36634 . - 0 ID=cds-WP_000234466.1;Parent=gene-C9E95_RS06140;Dbxref=GenBank:WP_000234466.1;Name=WP_000234466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462031.1;locus_tag=C9E95_RS06140;product=DUF554 domain-containing protein;protein_id=WP_000234466.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 37059 39194 . + . ID=gene-C9E95_RS06145;Name=C9E95_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06145;old_locus_tag=C9E95_06300 NZ_PYJW01000060.1 Protein Homology CDS 37059 39194 . + 0 ID=cds-WP_000839737.1;Parent=gene-C9E95_RS06145;Dbxref=GenBank:WP_000839737.1;Name=WP_000839737.1;Ontology_term=GO:0006596,GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;go_process=polyamine biosynthetic process|0006596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462030.1;locus_tag=C9E95_RS06145;product=ornithine decarboxylase;protein_id=WP_000839737.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 39256 40512 . - . ID=gene-C9E95_RS06150;Name=C9E95_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06150;old_locus_tag=C9E95_06305 NZ_PYJW01000060.1 Protein Homology CDS 39256 40512 . - 0 ID=cds-WP_001049804.1;Parent=gene-C9E95_RS06150;Dbxref=GenBank:WP_001049804.1;Name=WP_001049804.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462029.1;locus_tag=C9E95_RS06150;product=nucleoside permease;protein_id=WP_001049804.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 40729 41814 . - . ID=gene-C9E95_RS06155;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=C9E95_RS06155;old_locus_tag=C9E95_06310 NZ_PYJW01000060.1 Protein Homology CDS 40729 41814 . - 0 ID=cds-WP_000976289.1;Parent=gene-C9E95_RS06155;Dbxref=GenBank:WP_000976289.1;Name=WP_000976289.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462028.1;locus_tag=C9E95_RS06155;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_000976289.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 41927 42202 . - . ID=gene-C9E95_RS06160;Name=C9E95_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06160;old_locus_tag=C9E95_06315 NZ_PYJW01000060.1 Protein Homology CDS 41927 42202 . - 0 ID=cds-WP_080203956.1;Parent=gene-C9E95_RS06160;Dbxref=GenBank:WP_080203956.1;Name=WP_080203956.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462027.1;locus_tag=C9E95_RS06160;product=oxidative damage protection protein;protein_id=WP_080203956.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 42230 43282 . - . ID=gene-C9E95_RS06165;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=C9E95_RS06165;old_locus_tag=C9E95_06320 NZ_PYJW01000060.1 Protein Homology CDS 42230 43282 . - 0 ID=cds-WP_001148952.1;Parent=gene-C9E95_RS06165;Dbxref=GenBank:WP_001148952.1;Name=WP_001148952.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462026.1;locus_tag=C9E95_RS06165;product=A/G-specific adenine glycosylase;protein_id=WP_001148952.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 43437 44156 . + . ID=gene-C9E95_RS06170;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=C9E95_RS06170;old_locus_tag=C9E95_06330 NZ_PYJW01000060.1 Protein Homology CDS 43437 44156 . + 0 ID=cds-WP_000786895.1;Parent=gene-C9E95_RS06170;Dbxref=GenBank:WP_000786895.1;Name=WP_000786895.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462025.1;locus_tag=C9E95_RS06170;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_000786895.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 44156 44482 . + . ID=gene-C9E95_RS06175;Name=C9E95_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06175;old_locus_tag=C9E95_06335 NZ_PYJW01000060.1 Protein Homology CDS 44156 44482 . + 0 ID=cds-WP_001107574.1;Parent=gene-C9E95_RS06175;Dbxref=GenBank:WP_001107574.1;Name=WP_001107574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462024.1;locus_tag=C9E95_RS06175;product=YggL family protein;protein_id=WP_001107574.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 44532 45251 . + . ID=gene-C9E95_RS06180;Name=C9E95_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06180;old_locus_tag=C9E95_06340 NZ_PYJW01000060.1 Protein Homology CDS 44532 45251 . + 0 ID=cds-WP_000984827.1;Parent=gene-C9E95_RS06180;Dbxref=GenBank:WP_000984827.1;Name=WP_000984827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462023.1;locus_tag=C9E95_RS06180;product=DUF2884 domain-containing protein;protein_id=WP_000984827.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 45440 46486 . + . ID=gene-C9E95_RS06185;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=C9E95_RS06185;old_locus_tag=C9E95_06345 NZ_PYJW01000060.1 Protein Homology CDS 45440 46486 . + 0 ID=cds-WP_000394188.1;Parent=gene-C9E95_RS06185;Dbxref=GenBank:WP_000394188.1;Name=WP_000394188.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462022.1;locus_tag=C9E95_RS06185;product=L-asparaginase 2;protein_id=WP_000394188.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 46619 47626 . + . ID=gene-C9E95_RS06190;Name=C9E95_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06190;old_locus_tag=C9E95_06350 NZ_PYJW01000060.1 Protein Homology CDS 46619 47626 . + 0 ID=cds-WP_080203957.1;Parent=gene-C9E95_RS06190;Dbxref=GenBank:WP_080203957.1;Name=WP_080203957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462021.1;locus_tag=C9E95_RS06190;product=DUF1202 domain-containing protein;protein_id=WP_080203957.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 47718 48854 . - . ID=gene-C9E95_RS06195;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=C9E95_RS06195;old_locus_tag=C9E95_06355 NZ_PYJW01000060.1 Protein Homology CDS 47718 48854 . - 0 ID=cds-WP_023993944.1;Parent=gene-C9E95_RS06195;Dbxref=GenBank:WP_023993944.1;Name=WP_023993944.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462020.1;locus_tag=C9E95_RS06195;product=radical SAM family heme chaperone HemW;protein_id=WP_023993944.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 48847 49440 . - . ID=gene-C9E95_RS06200;Name=C9E95_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06200;old_locus_tag=C9E95_06360 NZ_PYJW01000060.1 Protein Homology CDS 48847 49440 . - 0 ID=cds-WP_001174769.1;Parent=gene-C9E95_RS06200;Dbxref=GenBank:WP_001174769.1;Name=WP_001174769.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462019.1;locus_tag=C9E95_RS06200;product=XTP/dITP diphosphatase;protein_id=WP_001174769.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 49448 49738 . - . ID=gene-C9E95_RS06205;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=C9E95_RS06205;old_locus_tag=C9E95_06365 NZ_PYJW01000060.1 Protein Homology CDS 49448 49738 . - 0 ID=cds-WP_001277205.1;Parent=gene-C9E95_RS06205;Dbxref=GenBank:WP_001277205.1;Name=WP_001277205.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462018.1;locus_tag=C9E95_RS06205;product=DUF167 family protein YggU;protein_id=WP_001277205.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 49735 50301 . - . ID=gene-C9E95_RS06210;Name=C9E95_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06210;old_locus_tag=C9E95_06370 NZ_PYJW01000060.1 Protein Homology CDS 49735 50301 . - 0 ID=cds-WP_001094848.1;Parent=gene-C9E95_RS06210;Dbxref=GenBank:WP_001094848.1;Name=WP_001094848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462017.1;locus_tag=C9E95_RS06210;product=YggT family protein;protein_id=WP_001094848.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 50320 51024 . - . ID=gene-C9E95_RS06215;Name=C9E95_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06215;old_locus_tag=C9E95_06375 NZ_PYJW01000060.1 Protein Homology CDS 50320 51024 . - 0 ID=cds-WP_000997790.1;Parent=gene-C9E95_RS06215;Dbxref=GenBank:WP_000997790.1;Name=WP_000997790.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462016.1;locus_tag=C9E95_RS06215;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_000997790.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 51042 52022 . + . ID=gene-C9E95_RS06220;Name=C9E95_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06220;old_locus_tag=C9E95_06380 NZ_PYJW01000060.1 Protein Homology CDS 51042 52022 . + 0 ID=cds-WP_001055658.1;Parent=gene-C9E95_RS06220;Dbxref=GenBank:WP_001055658.1;Name=WP_001055658.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462015.1;locus_tag=C9E95_RS06220;product=type IV pilus twitching motility protein PilT;protein_id=WP_001055658.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 52154 52840 . + . ID=gene-C9E95_RS06225;Name=C9E95_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06225;old_locus_tag=C9E95_06385 NZ_PYJW01000060.1 Protein Homology CDS 52154 52840 . + 0 ID=cds-WP_023993945.1;Parent=gene-C9E95_RS06225;Dbxref=GenBank:WP_023993945.1;Name=WP_023993945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000098328.1;locus_tag=C9E95_RS06225;product=IclR family transcriptional regulator domain-containing protein;protein_id=WP_023993945.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 52887 53303 . - . ID=gene-C9E95_RS06230;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=C9E95_RS06230;old_locus_tag=C9E95_06390 NZ_PYJW01000060.1 Protein Homology CDS 52887 53303 . - 0 ID=cds-WP_000017096.1;Parent=gene-C9E95_RS06230;Dbxref=GenBank:WP_000017096.1;Name=WP_000017096.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462013.1;locus_tag=C9E95_RS06230;product=Holliday junction resolvase RuvX;protein_id=WP_000017096.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 53303 53866 . - . ID=gene-C9E95_RS06235;Name=C9E95_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06235;old_locus_tag=C9E95_06395 NZ_PYJW01000060.1 Protein Homology CDS 53303 53866 . - 0 ID=cds-WP_001053173.1;Parent=gene-C9E95_RS06235;Dbxref=GenBank:WP_001053173.1;Name=WP_001053173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=C9E95_RS06235;product=YqgE/AlgH family protein;protein_id=WP_001053173.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 54082 55029 . - . ID=gene-C9E95_RS06240;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=C9E95_RS06240;old_locus_tag=C9E95_06400 NZ_PYJW01000060.1 Protein Homology CDS 54082 55029 . - 0 ID=cds-WP_080203958.1;Parent=gene-C9E95_RS06240;Dbxref=GenBank:WP_080203958.1;Name=WP_080203958.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462011.1;locus_tag=C9E95_RS06240;product=glutathione synthase;protein_id=WP_080203958.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 55049 55780 . - . ID=gene-C9E95_RS06245;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=C9E95_RS06245;old_locus_tag=C9E95_06405 NZ_PYJW01000060.1 Protein Homology CDS 55049 55780 . - 0 ID=cds-WP_001675718.1;Parent=gene-C9E95_RS06245;Dbxref=GenBank:WP_001675718.1;Name=WP_001675718.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=C9E95_RS06245;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_001675718.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 55857 56564 . - . ID=gene-C9E95_RS06250;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=C9E95_RS06250;old_locus_tag=C9E95_06410 NZ_PYJW01000060.1 Protein Homology CDS 55857 56564 . - 0 ID=cds-WP_000286124.1;Parent=gene-C9E95_RS06250;Dbxref=GenBank:WP_000286124.1;Name=WP_000286124.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462009.1;locus_tag=C9E95_RS06250;product=deoxyribonuclease I;protein_id=WP_000286124.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 56659 57156 . - . ID=gene-C9E95_RS06255;Name=C9E95_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06255;old_locus_tag=C9E95_06415 NZ_PYJW01000060.1 Protein Homology CDS 56659 57156 . - 0 ID=cds-WP_080203959.1;Parent=gene-C9E95_RS06255;Dbxref=GenBank:WP_080203959.1;Name=WP_080203959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462008.1;locus_tag=C9E95_RS06255;product=SprT family zinc-dependent metalloprotease;protein_id=WP_080203959.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 57235 58629 . - . ID=gene-C9E95_RS06260;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=C9E95_RS06260;old_locus_tag=C9E95_06420 NZ_PYJW01000060.1 Protein Homology CDS 57235 58629 . - 0 ID=cds-WP_001113171.1;Parent=gene-C9E95_RS06260;Dbxref=GenBank:WP_001113171.1;Name=WP_001113171.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462007.1;locus_tag=C9E95_RS06260;product=galactose/proton symporter;protein_id=WP_001113171.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 59122 60276 . - . ID=gene-C9E95_RS06265;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=C9E95_RS06265;old_locus_tag=C9E95_06425 NZ_PYJW01000060.1 Protein Homology CDS 59122 60276 . - 0 ID=cds-WP_080203960.1;Parent=gene-C9E95_RS06265;Dbxref=GenBank:WP_080203960.1;Name=WP_080203960.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=C9E95_RS06265;product=methionine adenosyltransferase;protein_id=WP_080203960.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 60332 60631 . + . ID=gene-C9E95_RS06270;Name=C9E95_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06270;old_locus_tag=C9E95_06430 NZ_PYJW01000060.1 GeneMarkS-2+ CDS 60332 60631 . + 0 ID=cds-WP_001543499.1;Parent=gene-C9E95_RS06270;Dbxref=GenBank:WP_001543499.1;Name=WP_001543499.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS06270;product=hypothetical protein;protein_id=WP_001543499.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 60691 60840 . + . ID=gene-C9E95_RS23605;Name=C9E95_RS23605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23605 NZ_PYJW01000060.1 Protein Homology CDS 60691 60840 . + 0 ID=cds-WP_001751809.1;Parent=gene-C9E95_RS23605;Dbxref=GenBank:WP_001751809.1;Name=WP_001751809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=C9E95_RS23605;product=hypothetical protein;protein_id=WP_001751809.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 60926 61057 . + . ID=gene-C9E95_RS06280;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=C9E95_RS06280;old_locus_tag=C9E95_06440 NZ_PYJW01000060.1 Protein Homology CDS 60926 61057 . + 0 ID=cds-WP_000729109.1;Parent=gene-C9E95_RS06280;Dbxref=GenBank:WP_000729109.1;Name=WP_000729109.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462003.1;locus_tag=C9E95_RS06280;product=acid stress response protein YqgB;protein_id=WP_000729109.1;transl_table=11 NZ_PYJW01000060.1 RefSeq gene 61066 63042 . + . ID=gene-C9E95_RS06285;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=C9E95_RS06285;old_locus_tag=C9E95_06445 NZ_PYJW01000060.1 Protein Homology CDS 61066 63042 . + 0 ID=cds-WP_001278580.1;Parent=gene-C9E95_RS06285;Dbxref=GenBank:WP_001278580.1;Name=WP_001278580.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462002.1;locus_tag=C9E95_RS06285;product=biosynthetic arginine decarboxylase;protein_id=WP_001278580.1;transl_table=11 ##sequence-region NZ_PYJW01000024.1 1 1056 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000024.1 RefSeq region 1 1056 . + . ID=NZ_PYJW01000024.1:1..1056;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica ##sequence-region NZ_PYJW01000023.1 1 1055 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000023.1 RefSeq region 1 1055 . + . ID=NZ_PYJW01000023.1:1..1055;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000023.1 RefSeq gene 1 912 . - . ID=gene-C9E95_RS01185;Name=C9E95_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01185;old_locus_tag=C9E95_01200;partial=true;start_range=.,1 NZ_PYJW01000023.1 Protein Homology CDS 1 912 . - 0 ID=cds-WP_135369797.1;Parent=gene-C9E95_RS01185;Dbxref=GenBank:WP_135369797.1;Name=WP_135369797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400600.1;locus_tag=C9E95_RS01185;partial=true;product=type III secretion system effector arginine glycosyltransferase SseK1;protein_id=WP_135369797.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJW01000179.1 1 1045 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000179.1 RefSeq region 1 1045 . + . ID=NZ_PYJW01000179.1:1..1045;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000179.1 RefSeq gene 650 1045 . - . ID=gene-C9E95_RS21160;Name=C9E95_RS21160;end_range=1045,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21160;old_locus_tag=C9E95_21665;partial=true NZ_PYJW01000179.1 Protein Homology CDS 650 1045 . - 0 ID=cds-WP_135369885.1;Parent=gene-C9E95_RS21160;Dbxref=GenBank:WP_135369885.1;Name=WP_135369885.1;end_range=1045,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460741.1;locus_tag=C9E95_RS21160;partial=true;product=DUF4427 domain-containing protein;protein_id=WP_135369885.1;transl_table=11 ##sequence-region NZ_PYJW01000006.1 1 298 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000006.1 RefSeq region 1 298 . + . ID=NZ_PYJW01000006.1:1..298;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000006.1 RefSeq gene 1 290 . - . ID=gene-C9E95_RS00505;Name=C9E95_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00505;old_locus_tag=C9E95_00500;partial=true;start_range=.,1 NZ_PYJW01000006.1 Protein Homology CDS 1 290 . - 0 ID=cds-WP_245306705.1;Parent=gene-C9E95_RS00505;Dbxref=GenBank:WP_245306705.1;Name=WP_245306705.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026247.6;locus_tag=C9E95_RS00505;partial=true;product=EpsG family protein;protein_id=WP_245306705.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJW01000140.1 1 61262 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000140.1 RefSeq region 1 61262 . + . ID=NZ_PYJW01000140.1:1..61262;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000140.1 RefSeq gene 317 1123 . - . ID=gene-C9E95_RS16025;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=C9E95_RS16025;old_locus_tag=C9E95_16410 NZ_PYJW01000140.1 Protein Homology CDS 317 1123 . - 0 ID=cds-WP_135369864.1;Parent=gene-C9E95_RS16025;Dbxref=GenBank:WP_135369864.1;Name=WP_135369864.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460686.1;locus_tag=C9E95_RS16025;product=tryptophan synthase subunit alpha;protein_id=WP_135369864.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 1123 2316 . - . ID=gene-C9E95_RS16030;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=C9E95_RS16030;old_locus_tag=C9E95_16415 NZ_PYJW01000140.1 Protein Homology CDS 1123 2316 . - 0 ID=cds-WP_000209485.1;Parent=gene-C9E95_RS16030;Dbxref=GenBank:WP_000209485.1;Name=WP_000209485.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460685.1;locus_tag=C9E95_RS16030;product=tryptophan synthase subunit beta;protein_id=WP_000209485.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 2326 3684 . - . ID=gene-C9E95_RS16035;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=C9E95_RS16035;old_locus_tag=C9E95_16420 NZ_PYJW01000140.1 Protein Homology CDS 2326 3684 . - 0 ID=cds-WP_001195300.1;Parent=gene-C9E95_RS16035;Dbxref=GenBank:WP_001195300.1;Name=WP_001195300.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460684.1;locus_tag=C9E95_RS16035;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_001195300.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 3688 5283 . - . ID=gene-C9E95_RS16040;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=C9E95_RS16040;old_locus_tag=C9E95_16425 NZ_PYJW01000140.1 Protein Homology CDS 3688 5283 . - 0 ID=cds-WP_000763492.1;Parent=gene-C9E95_RS16040;Dbxref=GenBank:WP_000763492.1;Name=WP_000763492.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=C9E95_RS16040;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_000763492.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 5283 6845 . - . ID=gene-C9E95_RS16045;Name=C9E95_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16045;old_locus_tag=C9E95_16430 NZ_PYJW01000140.1 Protein Homology CDS 5283 6845 . - 0 ID=cds-WP_001194386.1;Parent=gene-C9E95_RS16045;Dbxref=GenBank:WP_001194386.1;Name=WP_001194386.1;Ontology_term=GO:0009058,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460682.1;locus_tag=C9E95_RS16045;product=anthranilate synthase component 1;protein_id=WP_001194386.1;transl_table=11 NZ_PYJW01000140.1 cmsearch sequence_feature 6868 6963 . - . ID=id-NZ_PYJW01000140.1:6868..6963;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_PYJW01000140.1 RefSeq gene 6940 6984 . - . ID=gene-C9E95_RS16050;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=C9E95_RS16050;old_locus_tag=C9E95_16435 NZ_PYJW01000140.1 Protein Homology CDS 6940 6984 . - 0 ID=cds-WP_131040947.1;Parent=gene-C9E95_RS16050;Dbxref=GenBank:WP_131040947.1;Name=WP_131040947.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448140.1;locus_tag=C9E95_RS16050;product=trp operon leader peptide;protein_id=WP_131040947.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 7106 7987 . + . ID=gene-C9E95_RS16055;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=C9E95_RS16055;old_locus_tag=C9E95_16440 NZ_PYJW01000140.1 Protein Homology CDS 7106 7987 . + 0 ID=cds-WP_000500437.1;Parent=gene-C9E95_RS16055;Dbxref=GenBank:WP_000500437.1;Name=WP_000500437.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460680.1;locus_tag=C9E95_RS16055;product=RNase RNM;protein_id=WP_000500437.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 7995 8615 . + . ID=gene-C9E95_RS16060;Name=C9E95_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16060;old_locus_tag=C9E95_16445 NZ_PYJW01000140.1 Protein Homology CDS 7995 8615 . + 0 ID=cds-WP_000077250.1;Parent=gene-C9E95_RS16060;Dbxref=GenBank:WP_000077250.1;Name=WP_000077250.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=C9E95_RS16060;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_000077250.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 8716 9591 . + . ID=gene-C9E95_RS16065;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=C9E95_RS16065;old_locus_tag=C9E95_16450 NZ_PYJW01000140.1 Protein Homology CDS 8716 9591 . + 0 ID=cds-WP_001291233.1;Parent=gene-C9E95_RS16065;Dbxref=GenBank:WP_001291233.1;Name=WP_001291233.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=C9E95_RS16065;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_001291233.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 9678 10268 . - . ID=gene-C9E95_RS16070;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=C9E95_RS16070;old_locus_tag=C9E95_16455 NZ_PYJW01000140.1 Protein Homology CDS 9678 10268 . - 0 ID=cds-WP_079897934.1;Parent=gene-C9E95_RS16070;Dbxref=GenBank:WP_079897934.1;Name=WP_079897934.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460677.1;locus_tag=C9E95_RS16070;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_079897934.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 10265 11026 . - . ID=gene-C9E95_RS16075;Name=C9E95_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16075;old_locus_tag=C9E95_16460 NZ_PYJW01000140.1 Protein Homology CDS 10265 11026 . - 0 ID=cds-WP_000559310.1;Parent=gene-C9E95_RS16075;Dbxref=GenBank:WP_000559310.1;Name=WP_000559310.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460676.1;locus_tag=C9E95_RS16075;product=YciK family oxidoreductase;protein_id=WP_000559310.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 11264 12310 . + . ID=gene-C9E95_RS16080;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=C9E95_RS16080;old_locus_tag=C9E95_16465 NZ_PYJW01000140.1 Protein Homology CDS 11264 12310 . + 0 ID=cds-WP_000422082.1;Parent=gene-C9E95_RS16080;Dbxref=GenBank:WP_000422082.1;Name=WP_000422082.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460675.1;locus_tag=C9E95_RS16080;product=protease SohB;protein_id=WP_000422082.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 12352 12603 . - . ID=gene-C9E95_RS16085;Name=C9E95_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16085;old_locus_tag=C9E95_16470 NZ_PYJW01000140.1 Protein Homology CDS 12352 12603 . - 0 ID=cds-WP_000548616.1;Parent=gene-C9E95_RS16085;Dbxref=GenBank:WP_000548616.1;Name=WP_000548616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460674.1;locus_tag=C9E95_RS16085;product=YciN family protein;protein_id=WP_000548616.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 13006 15603 . + . ID=gene-C9E95_RS16090;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=C9E95_RS16090;old_locus_tag=C9E95_16480 NZ_PYJW01000140.1 Protein Homology CDS 13006 15603 . + 0 ID=cds-WP_000513593.1;Parent=gene-C9E95_RS16090;Dbxref=GenBank:WP_000513593.1;Name=WP_000513593.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=C9E95_RS16090;product=type I DNA topoisomerase;protein_id=WP_000513593.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 16014 16988 . + . ID=gene-C9E95_RS16095;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=C9E95_RS16095;old_locus_tag=C9E95_16485 NZ_PYJW01000140.1 Protein Homology CDS 16014 16988 . + 0 ID=cds-WP_000776233.1;Parent=gene-C9E95_RS16095;Dbxref=GenBank:WP_000776233.1;Name=WP_000776233.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=C9E95_RS16095;product=HTH-type transcriptional regulator CysB;protein_id=WP_000776233.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 17269 17409 . + . ID=gene-C9E95_RS16100;Name=C9E95_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16100;old_locus_tag=C9E95_16490 NZ_PYJW01000140.1 Protein Homology CDS 17269 17409 . + 0 ID=cds-WP_213083417.1;Parent=gene-C9E95_RS16100;Dbxref=GenBank:WP_213083417.1;Name=WP_213083417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=C9E95_RS16100;product=YmiA family putative membrane protein;protein_id=WP_213083417.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 17410 17580 . + . ID=gene-C9E95_RS16105;Name=C9E95_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16105;old_locus_tag=C9E95_16495 NZ_PYJW01000140.1 Protein Homology CDS 17410 17580 . + 0 ID=cds-WP_000029027.1;Parent=gene-C9E95_RS16105;Dbxref=GenBank:WP_000029027.1;Name=WP_000029027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000029022.1;locus_tag=C9E95_RS16105;product=hypothetical protein;protein_id=WP_000029027.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 17690 17782 . + . ID=gene-C9E95_RS23545;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=C9E95_RS23545 NZ_PYJW01000140.1 Protein Homology CDS 17690 17782 . + 0 ID=cds-WP_223148964.1;Parent=gene-C9E95_RS23545;Dbxref=GenBank:WP_223148964.1;Name=WP_223148964.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_226998799.1;locus_tag=C9E95_RS23545;product=small membrane protein YmiC;protein_id=WP_223148964.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 17965 20640 . + . ID=gene-C9E95_RS16110;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=C9E95_RS16110;old_locus_tag=C9E95_16500 NZ_PYJW01000140.1 Protein Homology CDS 17965 20640 . + 0 ID=cds-WP_080203675.1;Parent=gene-C9E95_RS16110;Dbxref=GenBank:WP_080203675.1;Name=WP_080203675.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=C9E95_RS16110;product=aconitate hydratase AcnA;protein_id=WP_080203675.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 20696 21286 . - . ID=gene-C9E95_RS16115;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=C9E95_RS16115;old_locus_tag=C9E95_16505 NZ_PYJW01000140.1 Protein Homology CDS 20696 21286 . - 0 ID=cds-WP_001176284.1;Parent=gene-C9E95_RS16115;Dbxref=GenBank:WP_001176284.1;Name=WP_001176284.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460670.1;locus_tag=C9E95_RS16115;product=GTP cyclohydrolase II;protein_id=WP_001176284.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 21482 22246 . + . ID=gene-C9E95_RS16120;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=C9E95_RS16120;old_locus_tag=C9E95_16510 NZ_PYJW01000140.1 Protein Homology CDS 21482 22246 . + 0 ID=cds-WP_000948651.1;Parent=gene-C9E95_RS16120;Dbxref=GenBank:WP_000948651.1;Name=WP_000948651.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460669.1;locus_tag=C9E95_RS16120;product=phosphatidylglycerophosphatase B;protein_id=WP_000948651.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 22396 22704 . + . ID=gene-C9E95_RS16125;Name=C9E95_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16125;old_locus_tag=C9E95_16520 NZ_PYJW01000140.1 Protein Homology CDS 22396 22704 . + 0 ID=cds-WP_000876301.1;Parent=gene-C9E95_RS16125;Dbxref=GenBank:WP_000876301.1;Name=WP_000876301.1;Ontology_term=GO:0008653,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460668.1;locus_tag=C9E95_RS16125;product=LapA family protein;protein_id=WP_000876301.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 22711 23880 . + . ID=gene-C9E95_RS16130;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=C9E95_RS16130;old_locus_tag=C9E95_16525 NZ_PYJW01000140.1 Protein Homology CDS 22711 23880 . + 0 ID=cds-WP_000891378.1;Parent=gene-C9E95_RS16130;Dbxref=GenBank:WP_000891378.1;Name=WP_000891378.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=C9E95_RS16130;product=lipopolysaccharide assembly protein LapB;protein_id=WP_000891378.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 24071 24808 . + . ID=gene-C9E95_RS16135;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=C9E95_RS16135;old_locus_tag=C9E95_16530 NZ_PYJW01000140.1 Protein Homology CDS 24071 24808 . + 0 ID=cds-WP_001529407.1;Parent=gene-C9E95_RS16135;Dbxref=GenBank:WP_001529407.1;Name=WP_001529407.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460666.1;locus_tag=C9E95_RS16135;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_001529407.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 24808 25134 . + . ID=gene-C9E95_RS16140;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=C9E95_RS16140;old_locus_tag=C9E95_16535 NZ_PYJW01000140.1 Protein Homology CDS 24808 25134 . + 0 ID=cds-WP_001285199.1;Parent=gene-C9E95_RS16140;Dbxref=GenBank:WP_001285199.1;Name=WP_001285199.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460665.1;locus_tag=C9E95_RS16140;product=stress response translation initiation inhibitor YciH;protein_id=WP_001285199.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 25254 25472 . - . ID=gene-C9E95_RS16145;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=C9E95_RS16145;old_locus_tag=C9E95_16540 NZ_PYJW01000140.1 Protein Homology CDS 25254 25472 . - 0 ID=cds-WP_000481166.1;Parent=gene-C9E95_RS16145;Dbxref=GenBank:WP_000481166.1;Name=WP_000481166.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=C9E95_RS16145;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_000481166.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 25731 26483 . - . ID=gene-C9E95_RS16150;Name=C9E95_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16150;old_locus_tag=C9E95_16545 NZ_PYJW01000140.1 Protein Homology CDS 25731 26483 . - 0 ID=cds-WP_001088594.1;Parent=gene-C9E95_RS16150;Dbxref=GenBank:WP_001088594.1;Name=WP_001088594.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460663.1;locus_tag=C9E95_RS16150;product=DNA-binding transcriptional regulator YciT;protein_id=WP_001088594.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 26570 26749 . - . ID=gene-C9E95_RS16155;Name=C9E95_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16155;old_locus_tag=C9E95_16550 NZ_PYJW01000140.1 Protein Homology CDS 26570 26749 . - 0 ID=cds-WP_001279854.1;Parent=gene-C9E95_RS16155;Dbxref=GenBank:WP_001279854.1;Name=WP_001279854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279854.1;locus_tag=C9E95_RS16155;product=YciZ family protein;protein_id=WP_001279854.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 26871 28853 . - . ID=gene-C9E95_RS16160;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=C9E95_RS16160;old_locus_tag=C9E95_16555 NZ_PYJW01000140.1 Protein Homology CDS 26871 28853 . - 0 ID=cds-WP_023993303.1;Parent=gene-C9E95_RS16160;Dbxref=GenBank:WP_023993303.1;Name=WP_023993303.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=C9E95_RS16160;product=cyclic di-GMP phosphodiesterase;protein_id=WP_023993303.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 29115 31049 . - . ID=gene-C9E95_RS16165;Name=C9E95_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16165;old_locus_tag=C9E95_16565 NZ_PYJW01000140.1 Protein Homology CDS 29115 31049 . - 0 ID=cds-WP_023993302.1;Parent=gene-C9E95_RS16165;Dbxref=GenBank:WP_023993302.1;Name=WP_023993302.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460661.1;locus_tag=C9E95_RS16165;product=exoribonuclease II;protein_id=WP_023993302.1;transl_table=11 NZ_PYJW01000140.1 RefSeq pseudogene 31294 32271 . - . ID=gene-C9E95_RS16170;Name=C9E95_RS16170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS16170;old_locus_tag=C9E95_16570;partial=true;pseudo=true;start_range=.,31294 NZ_PYJW01000140.1 Protein Homology CDS 31294 32271 . - 0 ID=cds-C9E95_RS16170;Parent=gene-C9E95_RS16170;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460660.1;locus_tag=C9E95_RS16170;partial=true;product=carboxymuconolactone decarboxylase family protein;pseudo=true;start_range=.,31294;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 32471 33259 . - . ID=gene-C9E95_RS16175;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=C9E95_RS16175;old_locus_tag=C9E95_16575 NZ_PYJW01000140.1 Protein Homology CDS 32471 33259 . - 0 ID=cds-WP_000506501.1;Parent=gene-C9E95_RS16175;Dbxref=GenBank:WP_000506501.1;Name=WP_000506501.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=C9E95_RS16175;product=enoyl-ACP reductase FabI;protein_id=WP_000506501.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 33377 33676 . - . ID=gene-C9E95_RS16180;Name=C9E95_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16180;old_locus_tag=C9E95_16580 NZ_PYJW01000140.1 Protein Homology CDS 33377 33676 . - 0 ID=cds-WP_010989025.1;Parent=gene-C9E95_RS16180;Dbxref=GenBank:WP_010989025.1;Name=WP_010989025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460658.1;locus_tag=C9E95_RS16180;product=hypothetical protein;protein_id=WP_010989025.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 33651 33830 . - . ID=gene-C9E95_RS16185;Name=C9E95_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16185;old_locus_tag=C9E95_16585 NZ_PYJW01000140.1 Protein Homology CDS 33651 33830 . - 0 ID=cds-WP_001535215.1;Parent=gene-C9E95_RS16185;Dbxref=GenBank:WP_001535215.1;Name=WP_001535215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460657.1;locus_tag=C9E95_RS16185;product=hypothetical protein;protein_id=WP_001535215.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 33865 35238 . + . ID=gene-C9E95_RS16190;Name=steC;gbkey=Gene;gene=steC;gene_biotype=protein_coding;locus_tag=C9E95_RS16190;old_locus_tag=C9E95_16590 NZ_PYJW01000140.1 Protein Homology CDS 33865 35238 . + 0 ID=cds-WP_001116912.1;Parent=gene-C9E95_RS16190;Dbxref=GenBank:WP_001116912.1;Name=WP_001116912.1;gbkey=CDS;gene=steC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460656.1;locus_tag=C9E95_RS16190;product=SPI-2 type III secretion system effector kinase SteC;protein_id=WP_001116912.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 35705 36412 . + . ID=gene-C9E95_RS16195;Name=C9E95_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16195;old_locus_tag=C9E95_16595 NZ_PYJW01000140.1 Protein Homology CDS 35705 36412 . + 0 ID=cds-WP_001268395.1;Parent=gene-C9E95_RS16195;Dbxref=GenBank:WP_001268395.1;Name=WP_001268395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748430.1;locus_tag=C9E95_RS16195;product=EAL domain-containing protein;protein_id=WP_001268395.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 36428 37234 . - . ID=gene-C9E95_RS16200;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=C9E95_RS16200;old_locus_tag=C9E95_16600 NZ_PYJW01000140.1 Protein Homology CDS 36428 37234 . - 0 ID=cds-WP_000230462.1;Parent=gene-C9E95_RS16200;Dbxref=GenBank:WP_000230462.1;Name=WP_000230462.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460654.1;locus_tag=C9E95_RS16200;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_000230462.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 37236 38228 . - . ID=gene-C9E95_RS16205;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=C9E95_RS16205;old_locus_tag=C9E95_16605 NZ_PYJW01000140.1 Protein Homology CDS 37236 38228 . - 0 ID=cds-WP_135369865.1;Parent=gene-C9E95_RS16205;Dbxref=GenBank:WP_135369865.1;Name=WP_135369865.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460653.1;locus_tag=C9E95_RS16205;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_135369865.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 38228 39118 . - . ID=gene-C9E95_RS16210;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=C9E95_RS16210;old_locus_tag=C9E95_16610 NZ_PYJW01000140.1 Protein Homology CDS 38228 39118 . - 0 ID=cds-WP_001146150.1;Parent=gene-C9E95_RS16210;Dbxref=GenBank:WP_001146150.1;Name=WP_001146150.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460652.1;locus_tag=C9E95_RS16210;product=peptide ABC transporter permease SapC;protein_id=WP_001146150.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 39105 40070 . - . ID=gene-C9E95_RS16215;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=C9E95_RS16215;old_locus_tag=C9E95_16615 NZ_PYJW01000140.1 Protein Homology CDS 39105 40070 . - 0 ID=cds-WP_000583298.1;Parent=gene-C9E95_RS16215;Dbxref=GenBank:WP_000583298.1;Name=WP_000583298.1;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=C9E95_RS16215;product=peptide ABC transporter permease SapB;protein_id=WP_000583298.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 40067 41716 . - . ID=gene-C9E95_RS16220;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=C9E95_RS16220;old_locus_tag=C9E95_16620 NZ_PYJW01000140.1 Protein Homology CDS 40067 41716 . - 0 ID=cds-WP_001241622.1;Parent=gene-C9E95_RS16220;Dbxref=GenBank:WP_001241622.1;Name=WP_001241622.1;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=C9E95_RS16220;product=peptide ABC transporter substrate-binding protein SapA;protein_id=WP_001241622.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 41828 42808 . - . ID=gene-C9E95_RS16225;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=C9E95_RS16225;old_locus_tag=C9E95_16625 NZ_PYJW01000140.1 Protein Homology CDS 41828 42808 . - 0 ID=cds-WP_001738297.1;Parent=gene-C9E95_RS16225;Dbxref=GenBank:WP_001738297.1;Name=WP_001738297.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460649.1;locus_tag=C9E95_RS16225;product=phage shock protein operon transcriptional activator;protein_id=WP_001738297.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 42979 43647 . + . ID=gene-C9E95_RS16230;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=C9E95_RS16230;old_locus_tag=C9E95_16630 NZ_PYJW01000140.1 Protein Homology CDS 42979 43647 . + 0 ID=cds-WP_000510996.1;Parent=gene-C9E95_RS16230;Dbxref=GenBank:WP_000510996.1;Name=WP_000510996.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460648.1;locus_tag=C9E95_RS16230;product=phage shock protein PspA;protein_id=WP_000510996.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 43707 43931 . + . ID=gene-C9E95_RS16235;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=C9E95_RS16235;old_locus_tag=C9E95_16635 NZ_PYJW01000140.1 Protein Homology CDS 43707 43931 . + 0 ID=cds-WP_001274953.1;Parent=gene-C9E95_RS16235;Dbxref=GenBank:WP_001274953.1;Name=WP_001274953.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460647.1;locus_tag=C9E95_RS16235;product=envelope stress response membrane protein PspB;protein_id=WP_001274953.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 43931 44290 . + . ID=gene-C9E95_RS16240;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=C9E95_RS16240;old_locus_tag=C9E95_16640 NZ_PYJW01000140.1 Protein Homology CDS 43931 44290 . + 0 ID=cds-WP_000508938.1;Parent=gene-C9E95_RS16240;Dbxref=GenBank:WP_000508938.1;Name=WP_000508938.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460646.1;locus_tag=C9E95_RS16240;product=envelope stress response membrane protein PspC;protein_id=WP_000508938.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 44313 44531 . + . ID=gene-C9E95_RS16245;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=C9E95_RS16245;old_locus_tag=C9E95_16645 NZ_PYJW01000140.1 Protein Homology CDS 44313 44531 . + 0 ID=cds-WP_001097610.1;Parent=gene-C9E95_RS16245;Dbxref=GenBank:WP_001097610.1;Name=WP_001097610.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460645.1;locus_tag=C9E95_RS16245;product=phage shock protein PspD;protein_id=WP_001097610.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 44607 44921 . + . ID=gene-C9E95_RS16250;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=C9E95_RS16250;old_locus_tag=C9E95_16650 NZ_PYJW01000140.1 Protein Homology CDS 44607 44921 . + 0 ID=cds-WP_000913428.1;Parent=gene-C9E95_RS16250;Dbxref=GenBank:WP_000913428.1;Name=WP_000913428.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460644.1;locus_tag=C9E95_RS16250;product=thiosulfate sulfurtransferase PspE;protein_id=WP_000913428.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 45070 46467 . + . ID=gene-C9E95_RS16255;Name=C9E95_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16255;old_locus_tag=C9E95_16655 NZ_PYJW01000140.1 Protein Homology CDS 45070 46467 . + 0 ID=cds-WP_000825858.1;Parent=gene-C9E95_RS16255;Dbxref=GenBank:WP_000825858.1;Name=WP_000825858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=C9E95_RS16255;product=YcjX family protein;protein_id=WP_000825858.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 46464 47525 . + . ID=gene-C9E95_RS16260;Name=C9E95_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16260;old_locus_tag=C9E95_16660 NZ_PYJW01000140.1 Protein Homology CDS 46464 47525 . + 0 ID=cds-WP_023138304.1;Parent=gene-C9E95_RS16260;Dbxref=GenBank:WP_023138304.1;Name=WP_023138304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460642.1;locus_tag=C9E95_RS16260;product=YcjF family protein;protein_id=WP_023138304.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 47673 49214 . + . ID=gene-C9E95_RS16265;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=C9E95_RS16265;old_locus_tag=C9E95_16665 NZ_PYJW01000140.1 Protein Homology CDS 47673 49214 . + 0 ID=cds-WP_001235493.1;Parent=gene-C9E95_RS16265;Dbxref=GenBank:WP_001235493.1;Name=WP_001235493.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460641.1;locus_tag=C9E95_RS16265;product=transcriptional regulator TyrR;protein_id=WP_001235493.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 49303 49809 . - . ID=gene-C9E95_RS16270;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=C9E95_RS16270;old_locus_tag=C9E95_16670 NZ_PYJW01000140.1 Protein Homology CDS 49303 49809 . - 0 ID=cds-WP_000084401.1;Parent=gene-C9E95_RS16270;Dbxref=GenBank:WP_000084401.1;Name=WP_000084401.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460640.1;locus_tag=C9E95_RS16270;product=thiol peroxidase;protein_id=WP_000084401.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 49925 50890 . + . ID=gene-C9E95_RS16275;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=C9E95_RS16275;old_locus_tag=C9E95_16675 NZ_PYJW01000140.1 Protein Homology CDS 49925 50890 . + 0 ID=cds-WP_001258073.1;Parent=gene-C9E95_RS16275;Dbxref=GenBank:WP_001258073.1;Name=WP_001258073.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460639.1;locus_tag=C9E95_RS16275;product=L-Ala-D/L-Glu epimerase;protein_id=WP_001258073.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 50865 51593 . - . ID=gene-C9E95_RS16280;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=C9E95_RS16280;old_locus_tag=C9E95_16680 NZ_PYJW01000140.1 Protein Homology CDS 50865 51593 . - 0 ID=cds-WP_000219107.1;Parent=gene-C9E95_RS16280;Dbxref=GenBank:WP_000219107.1;Name=WP_000219107.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460638.1;locus_tag=C9E95_RS16280;product=murein tripeptide amidase MpaA;protein_id=WP_000219107.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 51783 53396 . + . ID=gene-C9E95_RS16285;Name=C9E95_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16285;old_locus_tag=C9E95_16685 NZ_PYJW01000140.1 Protein Homology CDS 51783 53396 . + 0 ID=cds-WP_001216563.1;Parent=gene-C9E95_RS16285;Dbxref=GenBank:WP_001216563.1;Name=WP_001216563.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460637.1;locus_tag=C9E95_RS16285;product=peptide ABC transporter substrate-binding protein;protein_id=WP_001216563.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 53493 54422 . - . ID=gene-C9E95_RS16290;Name=C9E95_RS16290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16290;old_locus_tag=C9E95_16690 NZ_PYJW01000140.1 Protein Homology CDS 53493 54422 . - 0 ID=cds-WP_023993301.1;Parent=gene-C9E95_RS16290;Dbxref=GenBank:WP_023993301.1;Name=WP_023993301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460636.1;locus_tag=C9E95_RS16290;product=aromatic alcohol reductase;protein_id=WP_023993301.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 54541 55446 . + . ID=gene-C9E95_RS16295;Name=C9E95_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16295;old_locus_tag=C9E95_16695 NZ_PYJW01000140.1 Protein Homology CDS 54541 55446 . + 0 ID=cds-WP_023202503.1;Parent=gene-C9E95_RS16295;Dbxref=GenBank:WP_023202503.1;Name=WP_023202503.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460635.1;locus_tag=C9E95_RS16295;product=LysR family transcriptional regulator;protein_id=WP_023202503.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 55722 56591 . + . ID=gene-C9E95_RS16300;Name=C9E95_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16300;old_locus_tag=C9E95_16700 NZ_PYJW01000140.1 Protein Homology CDS 55722 56591 . + 0 ID=cds-WP_000456771.1;Parent=gene-C9E95_RS16300;Dbxref=GenBank:WP_000456771.1;Name=WP_000456771.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460634.1;locus_tag=C9E95_RS16300;product=aldo/keto reductase;protein_id=WP_000456771.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 56682 57395 . - . ID=gene-C9E95_RS16305;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=C9E95_RS16305;old_locus_tag=C9E95_16705 NZ_PYJW01000140.1 Protein Homology CDS 56682 57395 . - 0 ID=cds-WP_135369866.1;Parent=gene-C9E95_RS16305;Dbxref=GenBank:WP_135369866.1;Name=WP_135369866.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460633.1;locus_tag=C9E95_RS16305;product=SDR family oxidoreductase;protein_id=WP_135369866.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 57473 58063 . + . ID=gene-C9E95_RS16310;Name=C9E95_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16310;old_locus_tag=C9E95_16710 NZ_PYJW01000140.1 Protein Homology CDS 57473 58063 . + 0 ID=cds-WP_000208473.1;Parent=gene-C9E95_RS16310;Dbxref=GenBank:WP_000208473.1;Name=WP_000208473.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460632.1;locus_tag=C9E95_RS16310;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000208473.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 58192 58428 . + . ID=gene-C9E95_RS16315;Name=C9E95_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16315;old_locus_tag=C9E95_16715 NZ_PYJW01000140.1 Protein Homology CDS 58192 58428 . + 0 ID=cds-WP_001168017.1;Parent=gene-C9E95_RS16315;Dbxref=GenBank:WP_001168017.1;Name=WP_001168017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168019.1;locus_tag=C9E95_RS16315;product=YgdI/YgdR family lipoprotein;protein_id=WP_001168017.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 58642 59751 . - . ID=gene-C9E95_RS16320;Name=C9E95_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16320;old_locus_tag=C9E95_16720 NZ_PYJW01000140.1 Protein Homology CDS 58642 59751 . - 0 ID=cds-WP_080203676.1;Parent=gene-C9E95_RS16320;Dbxref=GenBank:WP_080203676.1;Name=WP_080203676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448089.1;locus_tag=C9E95_RS16320;product=hypothetical protein;protein_id=WP_080203676.1;transl_table=11 NZ_PYJW01000140.1 RefSeq gene 60144 61001 . - . ID=gene-C9E95_RS16325;Name=C9E95_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16325;old_locus_tag=C9E95_16725 NZ_PYJW01000140.1 Protein Homology CDS 60144 61001 . - 0 ID=cds-WP_012543356.1;Parent=gene-C9E95_RS16325;Dbxref=GenBank:WP_012543356.1;Name=WP_012543356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460629.1;locus_tag=C9E95_RS16325;product=GyrI-like domain-containing protein;protein_id=WP_012543356.1;transl_table=11 ##sequence-region NZ_PYJW01000137.1 1 264481 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000137.1 RefSeq region 1 264481 . + . ID=NZ_PYJW01000137.1:1..264481;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000137.1 RefSeq pseudogene 1 448 . + . ID=gene-C9E95_RS14360;Name=ssaU;gbkey=Gene;gene=ssaU;gene_biotype=pseudogene;locus_tag=C9E95_RS14360;old_locus_tag=C9E95_14725;partial=true;pseudo=true;start_range=.,1 NZ_PYJW01000137.1 Protein Homology CDS 1 448 . + 1 ID=cds-C9E95_RS14360;Parent=gene-C9E95_RS14360;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=ssaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460387.1;locus_tag=C9E95_RS14360;partial=true;product=SPI-2 type III secretion system apparatus protein SsaU;pseudo=true;start_range=.,1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 606 682 . - . ID=gene-C9E95_RS14365;Name=C9E95_RS14365;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS14365;old_locus_tag=C9E95_14730 NZ_PYJW01000137.1 tRNAscan-SE tRNA 606 682 . - . ID=rna-C9E95_RS14365;Parent=gene-C9E95_RS14365;anticodon=(pos:complement(646..648));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS14365;product=tRNA-Val NZ_PYJW01000137.1 tRNAscan-SE exon 606 682 . - . ID=exon-C9E95_RS14365-1;Parent=rna-C9E95_RS14365;anticodon=(pos:complement(646..648));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS14365;product=tRNA-Val NZ_PYJW01000137.1 RefSeq gene 693 769 . - . ID=gene-C9E95_RS14370;Name=C9E95_RS14370;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS14370;old_locus_tag=C9E95_14735 NZ_PYJW01000137.1 tRNAscan-SE tRNA 693 769 . - . ID=rna-C9E95_RS14370;Parent=gene-C9E95_RS14370;anticodon=(pos:complement(733..735));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS14370;product=tRNA-Val NZ_PYJW01000137.1 tRNAscan-SE exon 693 769 . - . ID=exon-C9E95_RS14370-1;Parent=rna-C9E95_RS14370;anticodon=(pos:complement(733..735));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS14370;product=tRNA-Val NZ_PYJW01000137.1 RefSeq gene 921 2294 . - . ID=gene-C9E95_RS14375;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=C9E95_RS14375;old_locus_tag=C9E95_14740 NZ_PYJW01000137.1 Protein Homology CDS 921 2294 . - 0 ID=cds-WP_001175077.1;Parent=gene-C9E95_RS14375;Dbxref=GenBank:WP_001175077.1;Name=WP_001175077.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460388.2;locus_tag=C9E95_RS14375;product=multidrug efflux MATE transporter MdtK;protein_id=WP_001175077.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 2511 3152 . + . ID=gene-C9E95_RS14380;Name=C9E95_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14380;old_locus_tag=C9E95_14745 NZ_PYJW01000137.1 Protein Homology CDS 2511 3152 . + 0 ID=cds-WP_080203991.1;Parent=gene-C9E95_RS14380;Dbxref=GenBank:WP_080203991.1;Name=WP_080203991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460389.1;locus_tag=C9E95_RS14380;product=riboflavin synthase subunit alpha;protein_id=WP_080203991.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 3194 4342 . - . ID=gene-C9E95_RS14385;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=C9E95_RS14385;old_locus_tag=C9E95_14750 NZ_PYJW01000137.1 Protein Homology CDS 3194 4342 . - 0 ID=cds-WP_080203990.1;Parent=gene-C9E95_RS14385;Dbxref=GenBank:WP_080203990.1;Name=WP_080203990.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460390.1;locus_tag=C9E95_RS14385;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_080203990.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 4632 5837 . - . ID=gene-C9E95_RS14390;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=C9E95_RS14390;old_locus_tag=C9E95_14755 NZ_PYJW01000137.1 Protein Homology CDS 4632 5837 . - 0 ID=cds-WP_001182316.1;Parent=gene-C9E95_RS14390;Dbxref=GenBank:WP_001182316.1;Name=WP_001182316.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460391.1;locus_tag=C9E95_RS14390;product=purine nucleoside transporter PunC;protein_id=WP_001182316.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 5950 6882 . + . ID=gene-C9E95_RS14395;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=C9E95_RS14395;old_locus_tag=C9E95_14760 NZ_PYJW01000137.1 Protein Homology CDS 5950 6882 . + 0 ID=cds-WP_000269523.1;Parent=gene-C9E95_RS14395;Dbxref=GenBank:WP_000269523.1;Name=WP_000269523.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=C9E95_RS14395;product=DNA-binding transcriptional activator PunR;protein_id=WP_000269523.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 6879 7904 . - . ID=gene-C9E95_RS14400;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=C9E95_RS14400;old_locus_tag=C9E95_14765 NZ_PYJW01000137.1 Protein Homology CDS 6879 7904 . - 0 ID=cds-WP_000190992.1;Parent=gene-C9E95_RS14400;Dbxref=GenBank:WP_000190992.1;Name=WP_000190992.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=C9E95_RS14400;product=HTH-type transcriptional repressor PurR;protein_id=WP_000190992.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 8200 8289 . + . ID=gene-C9E95_RS14405;Name=C9E95_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14405;old_locus_tag=C9E95_14775 NZ_PYJW01000137.1 Protein Homology CDS 8200 8289 . + 0 ID=cds-WP_000102277.1;Parent=gene-C9E95_RS14405;Dbxref=GenBank:WP_000102277.1;Name=WP_000102277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=C9E95_RS14405;product=YnhF family membrane protein;protein_id=WP_000102277.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 8372 8953 . - . ID=gene-C9E95_RS14410;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=C9E95_RS14410;old_locus_tag=C9E95_14780 NZ_PYJW01000137.1 Protein Homology CDS 8372 8953 . - 0 ID=cds-WP_020438077.1;Parent=gene-C9E95_RS14410;Dbxref=GenBank:WP_020438077.1;Name=WP_020438077.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460394.1;locus_tag=C9E95_RS14410;product=superoxide dismutase [Fe];protein_id=WP_020438077.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 9080 9901 . - . ID=gene-C9E95_RS14415;Name=C9E95_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14415;old_locus_tag=C9E95_14785 NZ_PYJW01000137.1 Protein Homology CDS 9080 9901 . - 0 ID=cds-WP_001779739.1;Parent=gene-C9E95_RS14415;Dbxref=GenBank:WP_001779739.1;Name=WP_001779739.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310391.1;locus_tag=C9E95_RS14415;product=C40 family peptidase;protein_id=WP_001779739.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 10237 10584 . + . ID=gene-C9E95_RS14420;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=C9E95_RS14420;old_locus_tag=C9E95_14790 NZ_PYJW01000137.1 Protein Homology CDS 10237 10584 . + 0 ID=cds-WP_000108176.1;Parent=gene-C9E95_RS14420;Dbxref=GenBank:WP_000108176.1;Name=WP_000108176.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460396.1;locus_tag=C9E95_RS14420;product=monothiol glutaredoxin 4;protein_id=WP_000108176.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 10662 11309 . - . ID=gene-C9E95_RS14425;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=C9E95_RS14425;old_locus_tag=C9E95_14795 NZ_PYJW01000137.1 Protein Homology CDS 10662 11309 . - 0 ID=cds-WP_001282272.1;Parent=gene-C9E95_RS14425;Dbxref=GenBank:WP_001282272.1;Name=WP_001282272.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460397.1;locus_tag=C9E95_RS14425;product=ribonuclease T;protein_id=WP_001282272.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 11410 11817 . - . ID=gene-C9E95_RS14430;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=C9E95_RS14430;old_locus_tag=C9E95_14800 NZ_PYJW01000137.1 Protein Homology CDS 11410 11817 . - 0 ID=cds-WP_001237787.1;Parent=gene-C9E95_RS14430;Dbxref=GenBank:WP_001237787.1;Name=WP_001237787.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=C9E95_RS14430;product=lactoylglutathione lyase;protein_id=WP_001237787.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 11886 12983 . - . ID=gene-C9E95_RS14435;Name=C9E95_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14435;old_locus_tag=C9E95_14805 NZ_PYJW01000137.1 Protein Homology CDS 11886 12983 . - 0 ID=cds-WP_000092935.1;Parent=gene-C9E95_RS14435;Dbxref=GenBank:WP_000092935.1;Name=WP_000092935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460399.1;locus_tag=C9E95_RS14435;product=alkene reductase;protein_id=WP_000092935.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 13042 13641 . - . ID=gene-C9E95_RS14440;Name=C9E95_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14440;old_locus_tag=C9E95_14810 NZ_PYJW01000137.1 Protein Homology CDS 13042 13641 . - 0 ID=cds-WP_001041823.1;Parent=gene-C9E95_RS14440;Dbxref=GenBank:WP_001041823.1;Name=WP_001041823.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460400.1;locus_tag=C9E95_RS14440;product=TetR/AcrR family transcriptional regulator;protein_id=WP_001041823.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 13744 13983 . + . ID=gene-C9E95_RS14445;Name=C9E95_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14445;old_locus_tag=C9E95_14815 NZ_PYJW01000137.1 Protein Homology CDS 13744 13983 . + 0 ID=cds-WP_001538148.1;Parent=gene-C9E95_RS14445;Dbxref=GenBank:WP_001538148.1;Name=WP_001538148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460401.1;locus_tag=C9E95_RS14445;product=DUF1289 domain-containing protein;protein_id=WP_001538148.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 14034 14930 . + . ID=gene-C9E95_RS14450;Name=C9E95_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14450;old_locus_tag=C9E95_14820 NZ_PYJW01000137.1 Protein Homology CDS 14034 14930 . + 0 ID=cds-WP_000250724.1;Parent=gene-C9E95_RS14450;Dbxref=GenBank:WP_000250724.1;Name=WP_000250724.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460402.1;locus_tag=C9E95_RS14450;product=aldo/keto reductase;protein_id=WP_000250724.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 15010 15531 . + . ID=gene-C9E95_RS14455;Name=sodC2;gbkey=Gene;gene=sodC2;gene_biotype=protein_coding;gene_synonym=sodCII;locus_tag=C9E95_RS14455;old_locus_tag=C9E95_14825 NZ_PYJW01000137.1 Protein Homology CDS 15010 15531 . + 0 ID=cds-WP_000826820.1;Parent=gene-C9E95_RS14455;Dbxref=GenBank:WP_000826820.1;Name=WP_000826820.1;gbkey=CDS;gene=sodC2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460403.1;locus_tag=C9E95_RS14455;product=superoxide dismutase [Cu-Zn] SodC2;protein_id=WP_000826820.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 15507 17546 . - . ID=gene-C9E95_RS14460;Name=C9E95_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14460;old_locus_tag=C9E95_14830 NZ_PYJW01000137.1 Protein Homology CDS 15507 17546 . - 0 ID=cds-WP_080203989.1;Parent=gene-C9E95_RS14460;Dbxref=GenBank:WP_080203989.1;Name=WP_080203989.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460404.1;locus_tag=C9E95_RS14460;product=FUSC family protein;protein_id=WP_080203989.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 17546 18406 . - . ID=gene-C9E95_RS14465;Name=C9E95_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14465;old_locus_tag=C9E95_14835 NZ_PYJW01000137.1 Protein Homology CDS 17546 18406 . - 0 ID=cds-WP_045340932.1;Parent=gene-C9E95_RS14465;Dbxref=GenBank:WP_045340932.1;Name=WP_045340932.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218841.1;locus_tag=C9E95_RS14465;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_045340932.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 18409 18645 . - . ID=gene-C9E95_RS14470;Name=C9E95_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14470;old_locus_tag=C9E95_14840 NZ_PYJW01000137.1 Protein Homology CDS 18409 18645 . - 0 ID=cds-WP_000649755.1;Parent=gene-C9E95_RS14470;Dbxref=GenBank:WP_000649755.1;Name=WP_000649755.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460406.1;locus_tag=C9E95_RS14470;product=DUF1656 domain-containing protein;protein_id=WP_000649755.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 18840 19280 . + . ID=gene-C9E95_RS14475;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=C9E95_RS14475;old_locus_tag=C9E95_14845 NZ_PYJW01000137.1 Protein Homology CDS 18840 19280 . + 0 ID=cds-WP_000764554.1;Parent=gene-C9E95_RS14475;Dbxref=GenBank:WP_000764554.1;Name=WP_000764554.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=C9E95_RS14475;product=transcriptional regulator SlyA;protein_id=WP_000764554.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 19328 19795 . - . ID=gene-C9E95_RS14480;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=C9E95_RS14480;old_locus_tag=C9E95_14850 NZ_PYJW01000137.1 Protein Homology CDS 19328 19795 . - 0 ID=cds-WP_000597179.1;Parent=gene-C9E95_RS14480;Dbxref=GenBank:WP_000597179.1;Name=WP_000597179.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460408.1;locus_tag=C9E95_RS14480;product=outer membrane lipoprotein SlyB;protein_id=WP_000597179.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 20068 21189 . + . ID=gene-C9E95_RS14485;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=C9E95_RS14485;old_locus_tag=C9E95_14855 NZ_PYJW01000137.1 Protein Homology CDS 20068 21189 . + 0 ID=cds-WP_080203988.1;Parent=gene-C9E95_RS14485;Dbxref=GenBank:WP_080203988.1;Name=WP_080203988.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460409.1;locus_tag=C9E95_RS14485;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_080203988.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 21277 21606 . + . ID=gene-C9E95_RS14490;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=C9E95_RS14490;old_locus_tag=C9E95_14860 NZ_PYJW01000137.1 Protein Homology CDS 21277 21606 . + 0 ID=cds-WP_001132086.1;Parent=gene-C9E95_RS14490;Dbxref=GenBank:WP_001132086.1;Name=WP_001132086.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460410.1;locus_tag=C9E95_RS14490;product=C-type lysozyme inhibitor;protein_id=WP_001132086.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 21665 22321 . + . ID=gene-C9E95_RS14495;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=C9E95_RS14495;old_locus_tag=C9E95_14865 NZ_PYJW01000137.1 Protein Homology CDS 21665 22321 . + 0 ID=cds-WP_001282334.1;Parent=gene-C9E95_RS14495;Dbxref=GenBank:WP_001282334.1;Name=WP_001282334.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=C9E95_RS14495;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282334.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 22448 23722 . + . ID=gene-C9E95_RS14500;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=C9E95_RS14500;old_locus_tag=C9E95_14870 NZ_PYJW01000137.1 Protein Homology CDS 22448 23722 . + 0 ID=cds-WP_000168626.1;Parent=gene-C9E95_RS14500;Dbxref=GenBank:WP_000168626.1;Name=WP_000168626.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=C9E95_RS14500;product=tyrosine--tRNA ligase;protein_id=WP_000168626.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 23782 24642 . + . ID=gene-C9E95_RS14505;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=C9E95_RS14505;old_locus_tag=C9E95_14875 NZ_PYJW01000137.1 Protein Homology CDS 23782 24642 . + 0 ID=cds-WP_000789736.1;Parent=gene-C9E95_RS14505;Dbxref=GenBank:WP_000789736.1;Name=WP_000789736.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460413.1;locus_tag=C9E95_RS14505;product=pyridoxal kinase PdxY;protein_id=WP_000789736.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 24701 25306 . - . ID=gene-C9E95_RS14510;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=C9E95_RS14510;old_locus_tag=C9E95_14880 NZ_PYJW01000137.1 Protein Homology CDS 24701 25306 . - 0 ID=cds-WP_000765727.1;Parent=gene-C9E95_RS14510;Dbxref=GenBank:WP_000765727.1;Name=WP_000765727.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460414.1;locus_tag=C9E95_RS14510;product=glutathione transferase GstA;protein_id=WP_000765727.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 25411 26916 . - . ID=gene-C9E95_RS14515;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=C9E95_RS14515;old_locus_tag=C9E95_14885 NZ_PYJW01000137.1 Protein Homology CDS 25411 26916 . - 0 ID=cds-WP_000100911.1;Parent=gene-C9E95_RS14515;Dbxref=GenBank:WP_000100911.1;Name=WP_000100911.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460415.1;locus_tag=C9E95_RS14515;product=dipeptide/tripeptide permease DtpA;protein_id=WP_000100911.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 27518 28153 . - . ID=gene-C9E95_RS14520;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=C9E95_RS14520;old_locus_tag=C9E95_14890 NZ_PYJW01000137.1 Protein Homology CDS 27518 28153 . - 0 ID=cds-WP_001030325.1;Parent=gene-C9E95_RS14520;Dbxref=GenBank:WP_001030325.1;Name=WP_001030325.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=C9E95_RS14520;product=endonuclease III;protein_id=WP_001030325.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 28153 28845 . - . ID=gene-C9E95_RS14525;Name=C9E95_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14525;old_locus_tag=C9E95_14895 NZ_PYJW01000137.1 Protein Homology CDS 28153 28845 . - 0 ID=cds-WP_001289628.1;Parent=gene-C9E95_RS14525;Dbxref=GenBank:WP_001289628.1;Name=WP_001289628.1;Ontology_term=GO:0022900;gbkey=CDS;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460417.1;locus_tag=C9E95_RS14525;product=electron transport complex subunit E;protein_id=WP_001289628.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 28848 29468 . - . ID=gene-C9E95_RS14530;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=C9E95_RS14530;old_locus_tag=C9E95_14900 NZ_PYJW01000137.1 Protein Homology CDS 28848 29468 . - 0 ID=cds-WP_080203987.1;Parent=gene-C9E95_RS14530;Dbxref=GenBank:WP_080203987.1;Name=WP_080203987.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460418.1;locus_tag=C9E95_RS14530;product=electron transport complex subunit RsxG;protein_id=WP_080203987.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 29472 30530 . - . ID=gene-C9E95_RS14535;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=C9E95_RS14535;old_locus_tag=C9E95_14905 NZ_PYJW01000137.1 Protein Homology CDS 29472 30530 . - 0 ID=cds-WP_000231963.1;Parent=gene-C9E95_RS14535;Dbxref=GenBank:WP_000231963.1;Name=WP_000231963.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460419.1;locus_tag=C9E95_RS14535;product=electron transport complex subunit RsxD;protein_id=WP_000231963.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 30531 32645 . - . ID=gene-C9E95_RS14540;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=C9E95_RS14540;old_locus_tag=C9E95_14910 NZ_PYJW01000137.1 Protein Homology CDS 30531 32645 . - 0 ID=cds-WP_080203986.1;Parent=gene-C9E95_RS14540;Dbxref=GenBank:WP_080203986.1;Name=WP_080203986.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460420.1;locus_tag=C9E95_RS14540;product=electron transport complex subunit RsxC;protein_id=WP_080203986.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 32638 33216 . - . ID=gene-C9E95_RS14545;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=C9E95_RS14545;old_locus_tag=C9E95_14915 NZ_PYJW01000137.1 Protein Homology CDS 32638 33216 . - 0 ID=cds-WP_001092600.1;Parent=gene-C9E95_RS14545;Dbxref=GenBank:WP_001092600.1;Name=WP_001092600.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460421.1;locus_tag=C9E95_RS14545;product=electron transport complex subunit RsxB;protein_id=WP_001092600.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 33216 33797 . - . ID=gene-C9E95_RS14550;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=C9E95_RS14550;old_locus_tag=C9E95_14920 NZ_PYJW01000137.1 Protein Homology CDS 33216 33797 . - 0 ID=cds-WP_000133179.1;Parent=gene-C9E95_RS14550;Dbxref=GenBank:WP_000133179.1;Name=WP_000133179.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=C9E95_RS14550;product=electron transport complex subunit RsxA;protein_id=WP_000133179.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 33874 34314 . - . ID=gene-C9E95_RS14555;Name=C9E95_RS14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14555;old_locus_tag=C9E95_14925 NZ_PYJW01000137.1 Protein Homology CDS 33874 34314 . - 0 ID=cds-WP_000214061.1;Parent=gene-C9E95_RS14555;Dbxref=GenBank:WP_000214061.1;Name=WP_000214061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460423.1;locus_tag=C9E95_RS14555;product=DUF2569 domain-containing protein;protein_id=WP_000214061.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 34403 34618 . - . ID=gene-C9E95_RS14560;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=C9E95_RS14560;old_locus_tag=C9E95_14930 NZ_PYJW01000137.1 Protein Homology CDS 34403 34618 . - 0 ID=cds-WP_000217946.1;Parent=gene-C9E95_RS14560;Dbxref=GenBank:WP_000217946.1;Name=WP_000217946.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460424.3;locus_tag=C9E95_RS14560;product=transcription modulator YdgT;protein_id=WP_000217946.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 34917 35042 . - . ID=gene-C9E95_RS14565;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=C9E95_RS14565;old_locus_tag=C9E95_14935 NZ_PYJW01000137.1 Protein Homology CDS 34917 35042 . - 0 ID=cds-WP_001708800.1;Parent=gene-C9E95_RS14565;Dbxref=GenBank:WP_001708800.1;Name=WP_001708800.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=C9E95_RS14565;product=division septum protein Blr;protein_id=WP_001708800.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 35250 36290 . + . ID=gene-C9E95_RS14570;Name=C9E95_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14570;old_locus_tag=C9E95_14940 NZ_PYJW01000137.1 Protein Homology CDS 35250 36290 . + 0 ID=cds-WP_000998242.1;Parent=gene-C9E95_RS14570;Dbxref=GenBank:WP_000998242.1;Name=WP_000998242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=C9E95_RS14570;product=oxidoreductase;protein_id=WP_000998242.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 36364 37365 . - . ID=gene-C9E95_RS14575;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=C9E95_RS14575;old_locus_tag=C9E95_14945 NZ_PYJW01000137.1 Protein Homology CDS 36364 37365 . - 0 ID=cds-WP_000565566.1;Parent=gene-C9E95_RS14575;Dbxref=GenBank:WP_000565566.1;Name=WP_000565566.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460426.1;locus_tag=C9E95_RS14575;product=adenosine deaminase;protein_id=WP_000565566.1;transl_table=11 NZ_PYJW01000137.1 RefSeq pseudogene 37591 37722 . - . ID=gene-C9E95_RS14580;Name=C9E95_RS14580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS14580;old_locus_tag=C9E95_14950;partial=true;pseudo=true;start_range=.,37591 NZ_PYJW01000137.1 Protein Homology CDS 37591 37722 . - 0 ID=cds-C9E95_RS14580;Parent=gene-C9E95_RS14580;Note=catalyzes the formation of homocysteine and pyruvate from cystathionine%3B also acts a a negative regulator for the mal regulon but interacting with the transcriptional activator MalT%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000459379.1;locus_tag=C9E95_RS14580;partial=true;product=transcriptional regulator;pseudo=true;start_range=.,37591;transl_table=11 NZ_PYJW01000137.1 RefSeq pseudogene 37732 37951 . - . ID=gene-C9E95_RS14585;Name=C9E95_RS14585;end_range=37951,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS14585;old_locus_tag=C9E95_14955;partial=true;pseudo=true NZ_PYJW01000137.1 Protein Homology CDS 37732 37951 . - 0 ID=cds-C9E95_RS14585;Parent=gene-C9E95_RS14585;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009401,GO:0008982;end_range=37951,.;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310356.1;locus_tag=C9E95_RS14585;partial=true;product=glucose PTS transporter subunit EIIB;pseudo=true;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 38070 39578 . - . ID=gene-C9E95_RS14590;Name=C9E95_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14590;old_locus_tag=C9E95_14960 NZ_PYJW01000137.1 Protein Homology CDS 38070 39578 . - 0 ID=cds-WP_080203985.1;Parent=gene-C9E95_RS14590;Dbxref=GenBank:WP_080203985.1;Name=WP_080203985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460427.1;locus_tag=C9E95_RS14590;product=YdgA family protein;protein_id=WP_080203985.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 39681 40856 . - . ID=gene-C9E95_RS14595;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=C9E95_RS14595;old_locus_tag=C9E95_14965 NZ_PYJW01000137.1 Protein Homology CDS 39681 40856 . - 0 ID=cds-WP_001170618.1;Parent=gene-C9E95_RS14595;Dbxref=GenBank:WP_001170618.1;Name=WP_001170618.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460428.1;locus_tag=C9E95_RS14595;product=mannose-6-phosphate isomerase;protein_id=WP_001170618.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 41056 42702 . + . ID=gene-C9E95_RS14600;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=C9E95_RS14600;old_locus_tag=C9E95_14970 NZ_PYJW01000137.1 Protein Homology CDS 41056 42702 . + 0 ID=cds-WP_000066609.1;Parent=gene-C9E95_RS14600;Dbxref=GenBank:WP_000066609.1;Name=WP_000066609.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=C9E95_RS14600;product=class I fumarate hydratase;protein_id=WP_000066609.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 42870 44273 . + . ID=gene-C9E95_RS14605;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=C9E95_RS14605;old_locus_tag=C9E95_14975 NZ_PYJW01000137.1 Protein Homology CDS 42870 44273 . + 0 ID=cds-WP_000259117.1;Parent=gene-C9E95_RS14605;Dbxref=GenBank:WP_000259117.1;Name=WP_000259117.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460430.1;locus_tag=C9E95_RS14605;product=class II fumarate hydratase;protein_id=WP_000259117.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 44270 45199 . - . ID=gene-C9E95_RS14610;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=C9E95_RS14610;old_locus_tag=C9E95_14980 NZ_PYJW01000137.1 Protein Homology CDS 44270 45199 . - 0 ID=cds-WP_080203984.1;Parent=gene-C9E95_RS14610;Dbxref=GenBank:WP_080203984.1;Name=WP_080203984.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460431.1;locus_tag=C9E95_RS14610;product=DNA replication terminus site-binding protein;protein_id=WP_080203984.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 45275 46576 . - . ID=gene-C9E95_RS14615;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=C9E95_RS14615;old_locus_tag=C9E95_14985 NZ_PYJW01000137.1 Protein Homology CDS 45275 46576 . - 0 ID=cds-WP_080203983.1;Parent=gene-C9E95_RS14615;Dbxref=GenBank:WP_080203983.1;Name=WP_080203983.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460432.1;locus_tag=C9E95_RS14615;product=two-component system sensor histidine kinase RstB;protein_id=WP_080203983.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 46688 48394 . - . ID=gene-C9E95_RS14620;Name=C9E95_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14620;old_locus_tag=C9E95_14990 NZ_PYJW01000137.1 Protein Homology CDS 46688 48394 . - 0 ID=cds-WP_080203982.1;Parent=gene-C9E95_RS14620;Dbxref=GenBank:WP_080203982.1;Name=WP_080203982.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460433.1;locus_tag=C9E95_RS14620;product=amidohydrolase;protein_id=WP_080203982.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 48547 49698 . - . ID=gene-C9E95_RS14625;Name=ompS2;gbkey=Gene;gene=ompS2;gene_biotype=protein_coding;locus_tag=C9E95_RS14625;old_locus_tag=C9E95_14995 NZ_PYJW01000137.1 Protein Homology CDS 48547 49698 . - 0 ID=cds-WP_001660099.1;Parent=gene-C9E95_RS14625;Dbxref=GenBank:WP_001660099.1;Name=WP_001660099.1;gbkey=CDS;gene=ompS2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460434.1;locus_tag=C9E95_RS14625;product=porin OmpS2;protein_id=WP_001660099.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 50178 50909 . - . ID=gene-C9E95_RS14635;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=C9E95_RS14635;old_locus_tag=C9E95_15005 NZ_PYJW01000137.1 Protein Homology CDS 50178 50909 . - 0 ID=cds-WP_001080048.1;Parent=gene-C9E95_RS14635;Dbxref=GenBank:WP_001080048.1;Name=WP_001080048.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460435.1;locus_tag=C9E95_RS14635;product=two-component system response regulator RstA;protein_id=WP_001080048.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 51036 51371 . + . ID=gene-C9E95_RS14640;Name=C9E95_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14640;old_locus_tag=C9E95_15010 NZ_PYJW01000137.1 Protein Homology CDS 51036 51371 . + 0 ID=cds-WP_000524877.1;Parent=gene-C9E95_RS14640;Dbxref=GenBank:WP_000524877.1;Name=WP_000524877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460436.1;locus_tag=C9E95_RS14640;product=GlpM family protein;protein_id=WP_000524877.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 51433 52815 . - . ID=gene-C9E95_RS14645;Name=C9E95_RS14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14645;old_locus_tag=C9E95_15015 NZ_PYJW01000137.1 Protein Homology CDS 51433 52815 . - 0 ID=cds-WP_000412353.1;Parent=gene-C9E95_RS14645;Dbxref=GenBank:WP_000412353.1;Name=WP_000412353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460437.1;locus_tag=C9E95_RS14645;product=amino acid permease;protein_id=WP_000412353.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 53114 54058 . - . ID=gene-C9E95_RS14650;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=C9E95_RS14650;old_locus_tag=C9E95_15020 NZ_PYJW01000137.1 Protein Homology CDS 53114 54058 . - 0 ID=cds-WP_000769302.1;Parent=gene-C9E95_RS14650;Dbxref=GenBank:WP_000769302.1;Name=WP_000769302.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460438.1;locus_tag=C9E95_RS14650;product=DUF1471 family protein YdgH;protein_id=WP_000769302.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 54585 56114 . + . ID=gene-C9E95_RS14655;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=C9E95_RS14655;old_locus_tag=C9E95_15025 NZ_PYJW01000137.1 Protein Homology CDS 54585 56114 . + 0 ID=cds-WP_001219355.1;Parent=gene-C9E95_RS14655;Dbxref=GenBank:WP_001219355.1;Name=WP_001219355.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460439.1;locus_tag=C9E95_RS14655;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_001219355.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 56125 57513 . + . ID=gene-C9E95_RS14660;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=C9E95_RS14660;old_locus_tag=C9E95_15030 NZ_PYJW01000137.1 Protein Homology CDS 56125 57513 . + 0 ID=cds-WP_000014056.1;Parent=gene-C9E95_RS14660;Dbxref=GenBank:WP_000014056.1;Name=WP_000014056.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=C9E95_RS14660;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_000014056.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 57688 58722 . - . ID=gene-C9E95_RS14665;Name=C9E95_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14665;old_locus_tag=C9E95_15035 NZ_PYJW01000137.1 Protein Homology CDS 57688 58722 . - 0 ID=cds-WP_001118268.1;Parent=gene-C9E95_RS14665;Dbxref=GenBank:WP_001118268.1;Name=WP_001118268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460441.1;locus_tag=C9E95_RS14665;product=AI-2E family transporter;protein_id=WP_001118268.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 58858 59028 . + . ID=gene-C9E95_RS23795;Name=C9E95_RS23795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23795;old_locus_tag=C9E95_15040 NZ_PYJW01000137.1 Protein Homology CDS 58858 59028 . + 0 ID=cds-WP_001539987.1;Parent=gene-C9E95_RS23795;Dbxref=GenBank:WP_001539987.1;Name=WP_001539987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334396.1;locus_tag=C9E95_RS23795;product=hypothetical protein;protein_id=WP_001539987.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 59140 59502 . + . ID=gene-C9E95_RS14675;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=C9E95_RS14675;old_locus_tag=C9E95_15045 NZ_PYJW01000137.1 Protein Homology CDS 59140 59502 . + 0 ID=cds-WP_000500278.1;Parent=gene-C9E95_RS14675;Dbxref=GenBank:WP_000500278.1;Name=WP_000500278.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460442.1;locus_tag=C9E95_RS14675;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_000500278.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 59489 59818 . + . ID=gene-C9E95_RS14680;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=C9E95_RS14680;old_locus_tag=C9E95_15050 NZ_PYJW01000137.1 Protein Homology CDS 59489 59818 . + 0 ID=cds-WP_001183821.1;Parent=gene-C9E95_RS14680;Dbxref=GenBank:WP_001183821.1;Name=WP_001183821.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460443.1;locus_tag=C9E95_RS14680;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_001183821.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 59858 60679 . - . ID=gene-C9E95_RS14685;Name=C9E95_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14685;old_locus_tag=C9E95_15055 NZ_PYJW01000137.1 Protein Homology CDS 59858 60679 . - 0 ID=cds-WP_000549649.1;Parent=gene-C9E95_RS14685;Dbxref=GenBank:WP_000549649.1;Name=WP_000549649.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460444.1;locus_tag=C9E95_RS14685;product=trypsin-like serine peptidase;protein_id=WP_000549649.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 60948 61199 . - . ID=gene-C9E95_RS14690;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=C9E95_RS14690;old_locus_tag=C9E95_15060 NZ_PYJW01000137.1 Protein Homology CDS 60948 61199 . - 0 ID=cds-WP_001520947.1;Parent=gene-C9E95_RS14690;Dbxref=GenBank:WP_001520947.1;Name=WP_001520947.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310330.2;locus_tag=C9E95_RS14690;product=acid resistance repetitive basic protein Asr;protein_id=WP_001520947.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 61435 61527 . + . ID=gene-C9E95_RS23305;Name=C9E95_RS23305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23305 NZ_PYJW01000137.1 Protein Homology CDS 61435 61527 . + 0 ID=cds-WP_001068154.1;Parent=gene-C9E95_RS23305;Dbxref=GenBank:WP_001068154.1;Name=WP_001068154.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=C9E95_RS23305;product=KPN_01571 family protein;protein_id=WP_001068154.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 61594 62847 . - . ID=gene-C9E95_RS14695;Name=C9E95_RS14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14695;old_locus_tag=C9E95_15065 NZ_PYJW01000137.1 Protein Homology CDS 61594 62847 . - 0 ID=cds-WP_000091796.1;Parent=gene-C9E95_RS14695;Dbxref=GenBank:WP_000091796.1;Name=WP_000091796.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460446.1;locus_tag=C9E95_RS14695;product=MFS transporter;protein_id=WP_000091796.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 62967 63866 . + . ID=gene-C9E95_RS14700;Name=C9E95_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14700;old_locus_tag=C9E95_15070 NZ_PYJW01000137.1 Protein Homology CDS 62967 63866 . + 0 ID=cds-WP_001019577.1;Parent=gene-C9E95_RS14700;Dbxref=GenBank:WP_001019577.1;Name=WP_001019577.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460447.1;locus_tag=C9E95_RS14700;product=LysR family transcriptional regulator;protein_id=WP_001019577.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 63994 65214 . + . ID=gene-C9E95_RS14705;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=C9E95_RS14705;old_locus_tag=C9E95_15080 NZ_PYJW01000137.1 Protein Homology CDS 63994 65214 . + 0 ID=cds-WP_000225095.1;Parent=gene-C9E95_RS14705;Dbxref=GenBank:WP_000225095.1;Name=WP_000225095.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460448.1;locus_tag=C9E95_RS14705;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_000225095.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 65340 66035 . + . ID=gene-C9E95_RS14710;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=C9E95_RS14710;old_locus_tag=C9E95_15085 NZ_PYJW01000137.1 Protein Homology CDS 65340 66035 . + 0 ID=cds-WP_000919206.1;Parent=gene-C9E95_RS14710;Dbxref=GenBank:WP_000919206.1;Name=WP_000919206.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=C9E95_RS14710;product=dethiobiotin synthase;protein_id=WP_000919206.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 65991 67280 . - . ID=gene-C9E95_RS14715;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=C9E95_RS14715;old_locus_tag=C9E95_15090 NZ_PYJW01000137.1 Protein Homology CDS 65991 67280 . - 0 ID=cds-WP_000554918.1;Parent=gene-C9E95_RS14715;Dbxref=GenBank:WP_000554918.1;Name=WP_000554918.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460450.3;locus_tag=C9E95_RS14715;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_000554918.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 67416 68564 . - . ID=gene-C9E95_RS14720;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=C9E95_RS14720;old_locus_tag=C9E95_15095 NZ_PYJW01000137.1 Protein Homology CDS 67416 68564 . - 0 ID=cds-WP_000593088.1;Parent=gene-C9E95_RS14720;Dbxref=GenBank:WP_000593088.1;Name=WP_000593088.1;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460451.1;locus_tag=C9E95_RS14720;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=WP_000593088.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 68564 69211 . - . ID=gene-C9E95_RS14725;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=C9E95_RS14725;old_locus_tag=C9E95_15100 NZ_PYJW01000137.1 Protein Homology CDS 68564 69211 . - 0 ID=cds-WP_000379677.1;Parent=gene-C9E95_RS14725;Dbxref=GenBank:WP_000379677.1;Name=WP_000379677.1;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460452.1;locus_tag=C9E95_RS14725;product=osmoprotectant ABC transporter permease OsmW;protein_id=WP_000379677.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 69221 70123 . - . ID=gene-C9E95_RS14730;Name=osmX;gbkey=Gene;gene=osmX;gene_biotype=protein_coding;locus_tag=C9E95_RS14730;old_locus_tag=C9E95_15105 NZ_PYJW01000137.1 Protein Homology CDS 69221 70123 . - 0 ID=cds-WP_001211193.1;Parent=gene-C9E95_RS14730;Dbxref=GenBank:WP_001211193.1;Name=WP_001211193.1;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460453.1;locus_tag=C9E95_RS14730;product=osmoprotectant ABC transporter substrate-binding protein OsmX;protein_id=WP_001211193.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 70152 70862 . - . ID=gene-C9E95_RS14735;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=C9E95_RS14735;old_locus_tag=C9E95_15110 NZ_PYJW01000137.1 Protein Homology CDS 70152 70862 . - 0 ID=cds-WP_000557304.1;Parent=gene-C9E95_RS14735;Dbxref=GenBank:WP_000557304.1;Name=WP_000557304.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460454.1;locus_tag=C9E95_RS14735;product=osmoprotectant ABC transporter permease OsmY;protein_id=WP_000557304.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 71167 71781 . - . ID=gene-C9E95_RS14740;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=C9E95_RS14740;old_locus_tag=C9E95_15115 NZ_PYJW01000137.1 Protein Homology CDS 71167 71781 . - 0 ID=cds-WP_000206571.1;Parent=gene-C9E95_RS14740;Dbxref=GenBank:WP_000206571.1;Name=WP_000206571.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460455.1;locus_tag=C9E95_RS14740;product=Tat proofreading chaperone DmsD;protein_id=WP_000206571.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 71824 72681 . - . ID=gene-C9E95_RS14745;Name=C9E95_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14745;old_locus_tag=C9E95_15120 NZ_PYJW01000137.1 Protein Homology CDS 71824 72681 . - 0 ID=cds-WP_000534703.1;Parent=gene-C9E95_RS14745;Dbxref=GenBank:WP_000534703.1;Name=WP_000534703.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460456.1;locus_tag=C9E95_RS14745;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000534703.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 72683 73300 . - . ID=gene-C9E95_RS14750;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=C9E95_RS14750;old_locus_tag=C9E95_15125 NZ_PYJW01000137.1 Protein Homology CDS 72683 73300 . - 0 ID=cds-WP_080166607.1;Parent=gene-C9E95_RS14750;Dbxref=GenBank:WP_080166607.1;Name=WP_080166607.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=C9E95_RS14750;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_080166607.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 73311 75746 . - . ID=gene-C9E95_RS14755;Name=ynfF;gbkey=Gene;gene=ynfF;gene_biotype=protein_coding;locus_tag=C9E95_RS14755;old_locus_tag=C9E95_15130 NZ_PYJW01000137.1 Protein Homology CDS 73311 75746 . - 0 ID=cds-WP_080203896.1;Parent=gene-C9E95_RS14755;Dbxref=GenBank:WP_080203896.1;Name=WP_080203896.1;gbkey=CDS;gene=ynfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460458.1;locus_tag=C9E95_RS14755;product=selenate/tellurate reductase subunit YnfF;protein_id=WP_080203896.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 75845 78283 . - . ID=gene-C9E95_RS14760;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=protein_coding;locus_tag=C9E95_RS14760;old_locus_tag=C9E95_15135 NZ_PYJW01000137.1 Protein Homology CDS 75845 78283 . - 0 ID=cds-WP_135369860.1;Parent=gene-C9E95_RS14760;Dbxref=GenBank:WP_135369860.1;Name=WP_135369860.1;gbkey=CDS;gene=ynfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006788576.1;locus_tag=C9E95_RS14760;product=selenate/tellurate reductase subunit YnfE;protein_id=WP_135369860.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 78440 78748 . - . ID=gene-C9E95_RS14765;Name=C9E95_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14765;old_locus_tag=C9E95_15140 NZ_PYJW01000137.1 Protein Homology CDS 78440 78748 . - 0 ID=cds-WP_000975516.1;Parent=gene-C9E95_RS14765;Dbxref=GenBank:WP_000975516.1;Name=WP_000975516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460460.1;locus_tag=C9E95_RS14765;product=DUF1161 domain-containing protein;protein_id=WP_000975516.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 78852 79562 . + . ID=gene-C9E95_RS14770;Name=C9E95_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14770;old_locus_tag=C9E95_15145 NZ_PYJW01000137.1 Protein Homology CDS 78852 79562 . + 0 ID=cds-WP_080203898.1;Parent=gene-C9E95_RS14770;Dbxref=GenBank:WP_080203898.1;Name=WP_080203898.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465701.1;locus_tag=C9E95_RS14770;product=YnfC family lipoprotein;protein_id=WP_080203898.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 79603 80163 . - . ID=gene-C9E95_RS14775;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=C9E95_RS14775;old_locus_tag=C9E95_15150 NZ_PYJW01000137.1 Protein Homology CDS 79603 80163 . - 0 ID=cds-WP_000199997.1;Parent=gene-C9E95_RS14775;Dbxref=GenBank:WP_000199997.1;Name=WP_000199997.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460462.1;locus_tag=C9E95_RS14775;product=spermidine N1-acetyltransferase;protein_id=WP_000199997.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 80199 80540 . - . ID=gene-C9E95_RS14780;Name=C9E95_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14780;old_locus_tag=C9E95_15155 NZ_PYJW01000137.1 Protein Homology CDS 80199 80540 . - 0 ID=cds-WP_001066440.1;Parent=gene-C9E95_RS14780;Dbxref=GenBank:WP_001066440.1;Name=WP_001066440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460463.1;locus_tag=C9E95_RS14780;product=DUF1283 family protein;protein_id=WP_001066440.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 80693 81019 . + . ID=gene-C9E95_RS14785;Name=C9E95_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14785;old_locus_tag=C9E95_15160 NZ_PYJW01000137.1 Protein Homology CDS 80693 81019 . + 0 ID=cds-WP_000921389.1;Parent=gene-C9E95_RS14785;Dbxref=GenBank:WP_000921389.1;Name=WP_000921389.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460464.1;locus_tag=C9E95_RS14785;product=YnfA family protein;protein_id=WP_000921389.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 81141 82355 . + . ID=gene-C9E95_RS14790;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=C9E95_RS14790;old_locus_tag=C9E95_15165 NZ_PYJW01000137.1 Protein Homology CDS 81141 82355 . + 0 ID=cds-WP_000706265.1;Parent=gene-C9E95_RS14790;Dbxref=GenBank:WP_000706265.1;Name=WP_000706265.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=C9E95_RS14790;product=starvation-sensing protein RspA;protein_id=WP_000706265.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 82366 83385 . + . ID=gene-C9E95_RS14795;Name=C9E95_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14795;old_locus_tag=C9E95_15170 NZ_PYJW01000137.1 Protein Homology CDS 82366 83385 . + 0 ID=cds-WP_023993252.1;Parent=gene-C9E95_RS14795;Dbxref=GenBank:WP_023993252.1;Name=WP_023993252.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460466.1;locus_tag=C9E95_RS14795;product=Zn-dependent oxidoreductase;protein_id=WP_023993252.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 83439 84818 . + . ID=gene-C9E95_RS14800;Name=C9E95_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14800;old_locus_tag=C9E95_15175 NZ_PYJW01000137.1 Protein Homology CDS 83439 84818 . + 0 ID=cds-WP_000192118.1;Parent=gene-C9E95_RS14800;Dbxref=GenBank:WP_000192118.1;Name=WP_000192118.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210164.1;locus_tag=C9E95_RS14800;product=MFS transporter;protein_id=WP_000192118.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 84962 86428 . + . ID=gene-C9E95_RS14805;Name=C9E95_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14805;old_locus_tag=C9E95_15180 NZ_PYJW01000137.1 Protein Homology CDS 84962 86428 . + 0 ID=cds-WP_080203899.1;Parent=gene-C9E95_RS14805;Dbxref=GenBank:WP_080203899.1;Name=WP_080203899.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460468.1;locus_tag=C9E95_RS14805;product=mannitol dehydrogenase family protein;protein_id=WP_080203899.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 86495 86698 . - . ID=gene-C9E95_RS14810;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=C9E95_RS14810;old_locus_tag=C9E95_15185 NZ_PYJW01000137.1 Protein Homology CDS 86495 86698 . - 0 ID=cds-WP_000989267.1;Parent=gene-C9E95_RS14810;Dbxref=GenBank:WP_000989267.1;Name=WP_000989267.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460469.1;locus_tag=C9E95_RS14810;product=putative selenium delivery protein YdfZ;protein_id=WP_000989267.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 86879 87565 . - . ID=gene-C9E95_RS14815;Name=C9E95_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14815;old_locus_tag=C9E95_15190 NZ_PYJW01000137.1 Protein Homology CDS 86879 87565 . - 0 ID=cds-WP_000215563.1;Parent=gene-C9E95_RS14815;Dbxref=GenBank:WP_000215563.1;Name=WP_000215563.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460470.1;locus_tag=C9E95_RS14815;product=GntR family transcriptional regulator;protein_id=WP_000215563.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 87695 88441 . - . ID=gene-C9E95_RS14820;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=C9E95_RS14820;old_locus_tag=C9E95_15195 NZ_PYJW01000137.1 Protein Homology CDS 87695 88441 . - 0 ID=cds-WP_000636564.1;Parent=gene-C9E95_RS14820;Dbxref=GenBank:WP_000636564.1;Name=WP_000636564.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460471.1;locus_tag=C9E95_RS14820;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_000636564.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 88580 90622 . + . ID=gene-C9E95_RS14825;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=C9E95_RS14825;old_locus_tag=C9E95_15200 NZ_PYJW01000137.1 Protein Homology CDS 88580 90622 . + 0 ID=cds-WP_000106261.1;Parent=gene-C9E95_RS14825;Dbxref=GenBank:WP_000106261.1;Name=WP_000106261.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460472.1;locus_tag=C9E95_RS14825;product=peptidyl-dipeptidase Dcp;protein_id=WP_000106261.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 90967 91149 . + . ID=gene-C9E95_RS14835;Name=C9E95_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14835;old_locus_tag=C9E95_15210 NZ_PYJW01000137.1 Protein Homology CDS 90967 91149 . + 0 ID=cds-WP_000807642.1;Parent=gene-C9E95_RS14835;Dbxref=GenBank:WP_000807642.1;Name=WP_000807642.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460473.1;locus_tag=C9E95_RS14835;product=general stress protein;protein_id=WP_000807642.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 91269 91796 . - . ID=gene-C9E95_RS14840;Name=C9E95_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14840;old_locus_tag=C9E95_15215 NZ_PYJW01000137.1 Protein Homology CDS 91269 91796 . - 0 ID=cds-WP_001235357.1;Parent=gene-C9E95_RS14840;Dbxref=GenBank:WP_001235357.1;Name=WP_001235357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460474.1;locus_tag=C9E95_RS14840;product=2-oxo-tetronate isomerase;protein_id=WP_001235357.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 92222 92614 . + . ID=gene-C9E95_RS14845;Name=C9E95_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14845;old_locus_tag=C9E95_15220 NZ_PYJW01000137.1 Protein Homology CDS 92222 92614 . + 0 ID=cds-WP_000776348.1;Parent=gene-C9E95_RS14845;Dbxref=GenBank:WP_000776348.1;Name=WP_000776348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460475.1;locus_tag=C9E95_RS14845;product=YdeI family stress tolerance OB fold protein;protein_id=WP_000776348.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 92961 93056 . - . ID=gene-C9E95_RS14855;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=C9E95_RS14855;old_locus_tag=C9E95_15230 NZ_PYJW01000137.1 Protein Homology CDS 92961 93056 . - 0 ID=cds-WP_000901531.1;Parent=gene-C9E95_RS14855;Dbxref=GenBank:WP_000901531.1;Name=WP_000901531.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=C9E95_RS14855;product=protein MgtS;protein_id=WP_000901531.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 93304 94491 . - . ID=gene-C9E95_RS14860;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=C9E95_RS14860;old_locus_tag=C9E95_15235 NZ_PYJW01000137.1 Protein Homology CDS 93304 94491 . - 0 ID=cds-WP_001068050.1;Parent=gene-C9E95_RS14860;Dbxref=GenBank:WP_001068050.1;Name=WP_001068050.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460476.1;locus_tag=C9E95_RS14860;product=efflux MFS transporter YdeE;protein_id=WP_001068050.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 94719 95621 . + . ID=gene-C9E95_RS14865;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=C9E95_RS14865;old_locus_tag=C9E95_15240 NZ_PYJW01000137.1 Protein Homology CDS 94719 95621 . + 0 ID=cds-WP_000987753.1;Parent=gene-C9E95_RS14865;Dbxref=GenBank:WP_000987753.1;Name=WP_000987753.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460477.1;locus_tag=C9E95_RS14865;product=O-acetylserine/cysteine exporter;protein_id=WP_000987753.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 95740 95955 . - . ID=gene-C9E95_RS14870;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=C9E95_RS14870;old_locus_tag=C9E95_15245 NZ_PYJW01000137.1 Protein Homology CDS 95740 95955 . - 0 ID=cds-WP_000783049.1;Parent=gene-C9E95_RS14870;Dbxref=GenBank:WP_000783049.1;Name=WP_000783049.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460478.1;locus_tag=C9E95_RS14870;product=multiple antibiotic resistance protein MarB;protein_id=WP_000783049.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 95984 96367 . - . ID=gene-C9E95_RS14875;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=C9E95_RS14875;old_locus_tag=C9E95_15250 NZ_PYJW01000137.1 Protein Homology CDS 95984 96367 . - 0 ID=cds-WP_000091194.1;Parent=gene-C9E95_RS14875;Dbxref=GenBank:WP_000091194.1;Name=WP_000091194.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091194.1;locus_tag=C9E95_RS14875;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_000091194.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 96387 96821 . - . ID=gene-C9E95_RS14880;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=C9E95_RS14880;old_locus_tag=C9E95_15255 NZ_PYJW01000137.1 Protein Homology CDS 96387 96821 . - 0 ID=cds-WP_135369861.1;Parent=gene-C9E95_RS14880;Dbxref=GenBank:WP_135369861.1;Name=WP_135369861.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460480.1;locus_tag=C9E95_RS14880;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_135369861.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 97080 97745 . + . ID=gene-C9E95_RS14885;Name=C9E95_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14885;old_locus_tag=C9E95_15260 NZ_PYJW01000137.1 Protein Homology CDS 97080 97745 . + 0 ID=cds-WP_080203900.1;Parent=gene-C9E95_RS14885;Dbxref=GenBank:WP_080203900.1;Name=WP_080203900.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460481.1;locus_tag=C9E95_RS14885;product=MarC family NAAT transporter;protein_id=WP_080203900.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 97792 98982 . - . ID=gene-C9E95_RS14890;Name=C9E95_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14890;old_locus_tag=C9E95_15265 NZ_PYJW01000137.1 Protein Homology CDS 97792 98982 . - 0 ID=cds-WP_000154614.1;Parent=gene-C9E95_RS14890;Dbxref=GenBank:WP_000154614.1;Name=WP_000154614.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460482.1;locus_tag=C9E95_RS14890;product=sugar transporter;protein_id=WP_000154614.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 99098 99970 . - . ID=gene-C9E95_RS14895;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=C9E95_RS14895;old_locus_tag=C9E95_15270 NZ_PYJW01000137.1 Protein Homology CDS 99098 99970 . - 0 ID=cds-WP_000366539.1;Parent=gene-C9E95_RS14895;Dbxref=GenBank:WP_000366539.1;Name=WP_000366539.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460483.1;locus_tag=C9E95_RS14895;product=putrescine utilization regulator PtrR;protein_id=WP_000366539.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 100073 101461 . + . ID=gene-C9E95_RS14900;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=C9E95_RS14900;old_locus_tag=C9E95_15275 NZ_PYJW01000137.1 Protein Homology CDS 100073 101461 . + 0 ID=cds-WP_080203901.1;Parent=gene-C9E95_RS14900;Dbxref=GenBank:WP_080203901.1;Name=WP_080203901.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460484.1;locus_tag=C9E95_RS14900;product=succinate-semialdehyde dehydrogenase;protein_id=WP_080203901.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 101534 102460 . + . ID=gene-C9E95_RS14905;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=C9E95_RS14905;old_locus_tag=C9E95_15280 NZ_PYJW01000137.1 Protein Homology CDS 101534 102460 . + 0 ID=cds-WP_000312240.1;Parent=gene-C9E95_RS14905;Dbxref=GenBank:WP_000312240.1;Name=WP_000312240.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=C9E95_RS14905;product=glutaminase B;protein_id=WP_000312240.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 102460 102819 . + . ID=gene-C9E95_RS14910;Name=C9E95_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14910;old_locus_tag=C9E95_15285 NZ_PYJW01000137.1 Protein Homology CDS 102460 102819 . + 0 ID=cds-WP_000992451.1;Parent=gene-C9E95_RS14910;Dbxref=GenBank:WP_000992451.1;Name=WP_000992451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460486.1;locus_tag=C9E95_RS14910;product=DUF4186 domain-containing protein;protein_id=WP_000992451.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 103075 103989 . + . ID=gene-C9E95_RS14915;Name=C9E95_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14915;old_locus_tag=C9E95_15290 NZ_PYJW01000137.1 Protein Homology CDS 103075 103989 . + 0 ID=cds-WP_001675544.1;Parent=gene-C9E95_RS14915;Dbxref=GenBank:WP_001675544.1;Name=WP_001675544.1;Ontology_term=GO:0005254;gbkey=CDS;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=C9E95_RS14915;product=bestrophin family protein;protein_id=WP_001675544.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 104045 104587 . - . ID=gene-C9E95_RS14920;Name=C9E95_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14920;old_locus_tag=C9E95_15295 NZ_PYJW01000137.1 Protein Homology CDS 104045 104587 . - 0 ID=cds-WP_000513122.1;Parent=gene-C9E95_RS14920;Dbxref=GenBank:WP_000513122.1;Name=WP_000513122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460488.1;locus_tag=C9E95_RS14920;product=YybH family protein;protein_id=WP_000513122.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 105304 106422 . + . ID=gene-C9E95_RS14925;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=C9E95_RS14925;old_locus_tag=C9E95_15300 NZ_PYJW01000137.1 Protein Homology CDS 105304 106422 . + 0 ID=cds-WP_000758336.1;Parent=gene-C9E95_RS14925;Dbxref=GenBank:WP_000758336.1;Name=WP_000758336.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460490.1;locus_tag=C9E95_RS14925;product=porin OmpC;protein_id=WP_000758336.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 106563 106904 . - . ID=gene-C9E95_RS14930;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=C9E95_RS14930;old_locus_tag=C9E95_15305 NZ_PYJW01000137.1 Protein Homology CDS 106563 106904 . - 0 ID=cds-WP_000544772.1;Parent=gene-C9E95_RS14930;Dbxref=GenBank:WP_000544772.1;Name=WP_000544772.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460491.1;locus_tag=C9E95_RS14930;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544772.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 106917 107804 . - . ID=gene-C9E95_RS14935;Name=C9E95_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14935;old_locus_tag=C9E95_15310 NZ_PYJW01000137.1 Protein Homology CDS 106917 107804 . - 0 ID=cds-WP_001189406.1;Parent=gene-C9E95_RS14935;Dbxref=GenBank:WP_001189406.1;Name=WP_001189406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460492.1;locus_tag=C9E95_RS14935;product=ATP/GTP-binding protein;protein_id=WP_001189406.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 107792 108853 . - . ID=gene-C9E95_RS14940;Name=C9E95_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14940;old_locus_tag=C9E95_15315 NZ_PYJW01000137.1 Protein Homology CDS 107792 108853 . - 0 ID=cds-WP_001660060.1;Parent=gene-C9E95_RS14940;Dbxref=GenBank:WP_001660060.1;Name=WP_001660060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460493.1;locus_tag=C9E95_RS14940;product=hydrogenase expression/formation C-terminal domain-containing protein;protein_id=WP_001660060.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 108871 109281 . - . ID=gene-C9E95_RS14945;Name=C9E95_RS14945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14945;old_locus_tag=C9E95_15320 NZ_PYJW01000137.1 Protein Homology CDS 108871 109281 . - 0 ID=cds-WP_000155985.1;Parent=gene-C9E95_RS14945;Dbxref=GenBank:WP_000155985.1;Name=WP_000155985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460494.1;locus_tag=C9E95_RS14945;product=hydrogenase;protein_id=WP_000155985.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 109278 109577 . - . ID=gene-C9E95_RS14950;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=C9E95_RS14950;old_locus_tag=C9E95_15325 NZ_PYJW01000137.1 Protein Homology CDS 109278 109577 . - 0 ID=cds-WP_000334904.1;Parent=gene-C9E95_RS14950;Dbxref=GenBank:WP_000334904.1;Name=WP_000334904.1;Ontology_term=GO:0065003,GO:0016530,GO:0051082;gbkey=CDS;gene=hypC;go_function=metallochaperone activity|0016530||IEA,unfolded protein binding|0051082||IEA;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460495.1;locus_tag=C9E95_RS14950;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WP_000334904.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 109577 110185 . - . ID=gene-C9E95_RS14955;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=C9E95_RS14955;old_locus_tag=C9E95_15330 NZ_PYJW01000137.1 Protein Homology CDS 109577 110185 . - 0 ID=cds-WP_000852663.1;Parent=gene-C9E95_RS14955;Dbxref=GenBank:WP_000852663.1;Name=WP_000852663.1;Ontology_term=GO:0051604,GO:0004190,GO:0046872,GO:0009375;gbkey=CDS;gene=hybD;go_component=ferredoxin hydrogenase complex|0009375||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA,metal ion binding|0046872||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460496.1;locus_tag=C9E95_RS14955;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_000852663.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 110191 110934 . - . ID=gene-C9E95_RS14960;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=C9E95_RS14960;old_locus_tag=C9E95_15335 NZ_PYJW01000137.1 Protein Homology CDS 110191 110934 . - 0 ID=cds-WP_000924456.1;Parent=gene-C9E95_RS14960;Dbxref=GenBank:WP_000924456.1;Name=WP_000924456.1;Ontology_term=GO:0022904,GO:0005506,GO:0009055,GO:0016020;gbkey=CDS;gene=cybH;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460497.1;locus_tag=C9E95_RS14960;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=WP_000924456.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 110885 112687 . - . ID=gene-C9E95_RS14965;Name=C9E95_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14965;old_locus_tag=C9E95_15340 NZ_PYJW01000137.1 Protein Homology CDS 110885 112687 . - 0 ID=cds-WP_000331200.1;Parent=gene-C9E95_RS14965;Dbxref=GenBank:WP_000331200.1;Name=WP_000331200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=C9E95_RS14965;product=nickel-dependent hydrogenase large subunit;protein_id=WP_000331200.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 112690 113793 . - . ID=gene-C9E95_RS14970;Name=C9E95_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14970;old_locus_tag=C9E95_15345 NZ_PYJW01000137.1 Protein Homology CDS 112690 113793 . - 0 ID=cds-WP_080203902.1;Parent=gene-C9E95_RS14970;Dbxref=GenBank:WP_080203902.1;Name=WP_080203902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460499.1;locus_tag=C9E95_RS14970;product=hydrogenase small subunit;protein_id=WP_080203902.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 114222 115313 . + . ID=gene-C9E95_RS14975;Name=C9E95_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14975;old_locus_tag=C9E95_15350 NZ_PYJW01000137.1 Protein Homology CDS 114222 115313 . + 0 ID=cds-WP_000981375.1;Parent=gene-C9E95_RS14975;Dbxref=GenBank:WP_000981375.1;Name=WP_000981375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460500.1;locus_tag=C9E95_RS14975;product=choloylglycine hydrolase family protein;protein_id=WP_000981375.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 115359 116150 . + . ID=gene-C9E95_RS14980;Name=C9E95_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14980;old_locus_tag=C9E95_15355 NZ_PYJW01000137.1 Protein Homology CDS 115359 116150 . + 0 ID=cds-WP_072101097.1;Parent=gene-C9E95_RS14980;Dbxref=GenBank:WP_072101097.1;Name=WP_072101097.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460501.1;locus_tag=C9E95_RS14980;product=FadR/GntR family transcriptional regulator;protein_id=WP_072101097.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 116209 117234 . - . ID=gene-C9E95_RS14985;Name=C9E95_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14985;old_locus_tag=C9E95_15360 NZ_PYJW01000137.1 Protein Homology CDS 116209 117234 . - 0 ID=cds-WP_000864935.1;Parent=gene-C9E95_RS14985;Dbxref=GenBank:WP_000864935.1;Name=WP_000864935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460502.1;locus_tag=C9E95_RS14985;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_000864935.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 117209 118495 . - . ID=gene-C9E95_RS14990;Name=C9E95_RS14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14990;old_locus_tag=C9E95_15365 NZ_PYJW01000137.1 Protein Homology CDS 117209 118495 . - 0 ID=cds-WP_000824240.1;Parent=gene-C9E95_RS14990;Dbxref=GenBank:WP_000824240.1;Name=WP_000824240.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460503.1;locus_tag=C9E95_RS14990;product=MFS transporter;protein_id=WP_000824240.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 118672 120228 . - . ID=gene-C9E95_RS14995;Name=C9E95_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14995;old_locus_tag=C9E95_15370 NZ_PYJW01000137.1 Protein Homology CDS 118672 120228 . - 0 ID=cds-WP_080203903.1;Parent=gene-C9E95_RS14995;Dbxref=GenBank:WP_080203903.1;Name=WP_080203903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460504.1;locus_tag=C9E95_RS14995;product=PhoPQ-activated pathogenicity-related family protein;protein_id=WP_080203903.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 120298 121539 . - . ID=gene-C9E95_RS15000;Name=C9E95_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15000;old_locus_tag=C9E95_15375 NZ_PYJW01000137.1 Protein Homology CDS 120298 121539 . - 0 ID=cds-WP_080203904.1;Parent=gene-C9E95_RS15000;Dbxref=GenBank:WP_080203904.1;Name=WP_080203904.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460505.1;locus_tag=C9E95_RS15000;product=MFS transporter;protein_id=WP_080203904.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 121529 123037 . - . ID=gene-C9E95_RS15005;Name=C9E95_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15005;old_locus_tag=C9E95_15380 NZ_PYJW01000137.1 Protein Homology CDS 121529 123037 . - 0 ID=cds-WP_000199413.1;Parent=gene-C9E95_RS15005;Dbxref=GenBank:WP_000199413.1;Name=WP_000199413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460506.1;locus_tag=C9E95_RS15005;product=FAD-dependent oxidoreductase;protein_id=WP_000199413.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 123082 123570 . + . ID=gene-C9E95_RS15010;Name=C9E95_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15010;old_locus_tag=C9E95_15385 NZ_PYJW01000137.1 Protein Homology CDS 123082 123570 . + 0 ID=cds-WP_080203905.1;Parent=gene-C9E95_RS15010;Dbxref=GenBank:WP_080203905.1;Name=WP_080203905.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460507.1;locus_tag=C9E95_RS15010;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_080203905.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 123763 124836 . + . ID=gene-C9E95_RS15015;Name=C9E95_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15015;old_locus_tag=C9E95_15390 NZ_PYJW01000137.1 Protein Homology CDS 123763 124836 . + 0 ID=cds-WP_080203906.1;Parent=gene-C9E95_RS15015;Dbxref=GenBank:WP_080203906.1;Name=WP_080203906.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527732.1;locus_tag=C9E95_RS15015;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_080203906.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 124894 125283 . - . ID=gene-C9E95_RS15020;Name=C9E95_RS15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15020;old_locus_tag=C9E95_15395 NZ_PYJW01000137.1 Protein Homology CDS 124894 125283 . - 0 ID=cds-WP_079972972.1;Parent=gene-C9E95_RS15020;Dbxref=GenBank:WP_079972972.1;Name=WP_079972972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460509.1;locus_tag=C9E95_RS15020;product=RidA family protein;protein_id=WP_079972972.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 125454 125738 . - . ID=gene-C9E95_RS15025;Name=C9E95_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15025;old_locus_tag=C9E95_15400 NZ_PYJW01000137.1 Protein Homology CDS 125454 125738 . - 0 ID=cds-WP_000221343.1;Parent=gene-C9E95_RS15025;Dbxref=GenBank:WP_000221343.1;Name=WP_000221343.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460510.1;locus_tag=C9E95_RS15025;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_000221343.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 125728 125976 . - . ID=gene-C9E95_RS15030;Name=C9E95_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15030;old_locus_tag=C9E95_15405 NZ_PYJW01000137.1 Protein Homology CDS 125728 125976 . - 0 ID=cds-WP_000885424.1;Parent=gene-C9E95_RS15030;Dbxref=GenBank:WP_000885424.1;Name=WP_000885424.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460511.1;locus_tag=C9E95_RS15030;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_000885424.1;transl_table=11 NZ_PYJW01000137.1 RefSeq pseudogene 126241 126339 . + . ID=gene-C9E95_RS23670;Name=C9E95_RS23670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23670;partial=true;pseudo=true;start_range=.,126241 NZ_PYJW01000137.1 Protein Homology CDS 126241 126339 . + 0 ID=cds-C9E95_RS23670;Parent=gene-C9E95_RS23670;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_090138499.1;locus_tag=C9E95_RS23670;partial=true;product=STM2901 family protein;pseudo=true;start_range=.,126241;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 126333 126665 . + . ID=gene-C9E95_RS15040;Name=C9E95_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15040;old_locus_tag=C9E95_15415 NZ_PYJW01000137.1 Protein Homology CDS 126333 126665 . + 0 ID=cds-WP_000253154.1;Parent=gene-C9E95_RS15040;Dbxref=GenBank:WP_000253154.1;Name=WP_000253154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253166.1;locus_tag=C9E95_RS15040;product=DUF1493 family protein;protein_id=WP_000253154.1;transl_table=11 NZ_PYJW01000137.1 RefSeq pseudogene 126945 127146 . + . ID=gene-C9E95_RS15045;Name=C9E95_RS15045;end_range=127146,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS15045;old_locus_tag=C9E95_15420;partial=true;pseudo=true NZ_PYJW01000137.1 Protein Homology CDS 126945 127146 . + 0 ID=cds-C9E95_RS15045;Parent=gene-C9E95_RS15045;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=127146,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460512.1;locus_tag=C9E95_RS15045;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJW01000137.1 RefSeq pseudogene 127138 127584 . - . ID=gene-C9E95_RS15050;Name=C9E95_RS15050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS15050;old_locus_tag=C9E95_15425;partial=true;pseudo=true;start_range=.,127138 NZ_PYJW01000137.1 Protein Homology CDS 127138 127584 . - 0 ID=cds-C9E95_RS15050;Parent=gene-C9E95_RS15050;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996655.1;locus_tag=C9E95_RS15050;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,127138;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 128490 129398 . + . ID=gene-C9E95_RS15060;Name=C9E95_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15060;old_locus_tag=C9E95_15435 NZ_PYJW01000137.1 Protein Homology CDS 128490 129398 . + 0 ID=cds-WP_023994284.1;Parent=gene-C9E95_RS15060;Dbxref=GenBank:WP_023994284.1;Name=WP_023994284.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176636.1;locus_tag=C9E95_RS15060;product=LysR family transcriptional regulator;protein_id=WP_023994284.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 129572 130552 . + . ID=gene-C9E95_RS15065;Name=C9E95_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15065;old_locus_tag=C9E95_15440 NZ_PYJW01000137.1 Protein Homology CDS 129572 130552 . + 0 ID=cds-WP_023993266.1;Parent=gene-C9E95_RS15065;Dbxref=GenBank:WP_023993266.1;Name=WP_023993266.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441349.1;locus_tag=C9E95_RS15065;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_023993266.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 130818 132284 . - . ID=gene-C9E95_RS15070;Name=C9E95_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15070;old_locus_tag=C9E95_15445 NZ_PYJW01000137.1 Protein Homology CDS 130818 132284 . - 0 ID=cds-WP_023994283.1;Parent=gene-C9E95_RS15070;Dbxref=GenBank:WP_023994283.1;Name=WP_023994283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460513.1;locus_tag=C9E95_RS15070;product=hypothetical protein;protein_id=WP_023994283.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 132542 133549 . + . ID=gene-C9E95_RS15075;Name=C9E95_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15075;old_locus_tag=C9E95_15450 NZ_PYJW01000137.1 Protein Homology CDS 132542 133549 . + 0 ID=cds-WP_023993268.1;Parent=gene-C9E95_RS15075;Dbxref=GenBank:WP_023993268.1;Name=WP_023993268.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460514.1;locus_tag=C9E95_RS15075;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_023993268.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 133693 135144 . + . ID=gene-C9E95_RS15080;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=C9E95_RS15080;old_locus_tag=C9E95_15455 NZ_PYJW01000137.1 Protein Homology CDS 133693 135144 . + 0 ID=cds-WP_001276631.1;Parent=gene-C9E95_RS15080;Dbxref=GenBank:WP_001276631.1;Name=WP_001276631.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460515.1;locus_tag=C9E95_RS15080;product=Na+/H+ antiporter NhaC;protein_id=WP_001276631.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 135157 136359 . + . ID=gene-C9E95_RS15085;Name=C9E95_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15085;old_locus_tag=C9E95_15460 NZ_PYJW01000137.1 Protein Homology CDS 135157 136359 . + 0 ID=cds-WP_000347156.1;Parent=gene-C9E95_RS15085;Dbxref=GenBank:WP_000347156.1;Name=WP_000347156.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460516.1;locus_tag=C9E95_RS15085;product=MalY/PatB family protein;protein_id=WP_000347156.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 136473 138548 . - . ID=gene-C9E95_RS15090;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=C9E95_RS15090;old_locus_tag=C9E95_15465 NZ_PYJW01000137.1 Protein Homology CDS 136473 138548 . - 0 ID=cds-WP_080203907.1;Parent=gene-C9E95_RS15090;Dbxref=GenBank:WP_080203907.1;Name=WP_080203907.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460517.1;locus_tag=C9E95_RS15090;product=glycogen debranching protein GlgX;protein_id=WP_080203907.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 138605 141133 . - . ID=gene-C9E95_RS15095;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=C9E95_RS15095;old_locus_tag=C9E95_15470 NZ_PYJW01000137.1 Protein Homology CDS 138605 141133 . - 0 ID=cds-WP_080203908.1;Parent=gene-C9E95_RS15095;Dbxref=GenBank:WP_080203908.1;Name=WP_080203908.1;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=C9E95_RS15095;product=malto-oligosyltrehalose synthase;protein_id=WP_080203908.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 141130 142914 . - . ID=gene-C9E95_RS15100;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=C9E95_RS15100;old_locus_tag=C9E95_15475 NZ_PYJW01000137.1 Protein Homology CDS 141130 142914 . - 0 ID=cds-WP_080203909.1;Parent=gene-C9E95_RS15100;Dbxref=GenBank:WP_080203909.1;Name=WP_080203909.1;Ontology_term=GO:0005992,GO:0033942;gbkey=CDS;gene=treZ;go_function=4-alpha-D-(1->4)-alpha-D-glucanotrehalose trehalohydrolase activity|0033942||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460519.1;locus_tag=C9E95_RS15100;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_080203909.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 143043 143828 . - . ID=gene-C9E95_RS15105;Name=C9E95_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15105;old_locus_tag=C9E95_15480 NZ_PYJW01000137.1 Protein Homology CDS 143043 143828 . - 0 ID=cds-WP_080203910.1;Parent=gene-C9E95_RS15105;Dbxref=GenBank:WP_080203910.1;Name=WP_080203910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460520.1;locus_tag=C9E95_RS15105;product=OBAP family protein;protein_id=WP_080203910.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 143970 144299 . - . ID=gene-C9E95_RS15110;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=C9E95_RS15110;old_locus_tag=C9E95_15485 NZ_PYJW01000137.1 Protein Homology CDS 143970 144299 . - 0 ID=cds-WP_001032161.1;Parent=gene-C9E95_RS15110;Dbxref=GenBank:WP_001032161.1;Name=WP_001032161.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460521.1;locus_tag=C9E95_RS15110;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001032161.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 144649 145080 . - . ID=gene-C9E95_RS15115;Name=C9E95_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15115;old_locus_tag=C9E95_15490 NZ_PYJW01000137.1 Protein Homology CDS 144649 145080 . - 0 ID=cds-WP_000152297.1;Parent=gene-C9E95_RS15115;Dbxref=GenBank:WP_000152297.1;Name=WP_000152297.1;Ontology_term=GO:0006972,GO:0006979,GO:0033194,GO:0004601,GO:0051920,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=peroxidase activity|0004601||IEA,peroxiredoxin activity|0051920||IEA;go_process=hyperosmotic response|0006972||IEA,response to oxidative stress|0006979||IEA,response to hydroperoxide|0033194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460522.1;locus_tag=C9E95_RS15115;product=OsmC family protein;protein_id=WP_000152297.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 145592 145807 . + . ID=gene-C9E95_RS15120;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=C9E95_RS15120;old_locus_tag=C9E95_15495 NZ_PYJW01000137.1 Protein Homology CDS 145592 145807 . + 0 ID=cds-WP_000495700.1;Parent=gene-C9E95_RS15120;Dbxref=GenBank:WP_000495700.1;Name=WP_000495700.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460523.1;locus_tag=C9E95_RS15120;product=biofilm-dependent modulation protein;protein_id=WP_000495700.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 145902 146045 . + . ID=gene-C9E95_RS15125;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=C9E95_RS15125;old_locus_tag=C9E95_15500 NZ_PYJW01000137.1 Protein Homology CDS 145902 146045 . + 0 ID=cds-WP_000841559.1;Parent=gene-C9E95_RS15125;Dbxref=GenBank:WP_000841559.1;Name=WP_000841559.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460524.1;locus_tag=C9E95_RS15125;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841559.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 146220 147917 . + . ID=gene-C9E95_RS15130;Name=C9E95_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15130;old_locus_tag=C9E95_15505 NZ_PYJW01000137.1 Protein Homology CDS 146220 147917 . + 0 ID=cds-WP_000450511.1;Parent=gene-C9E95_RS15130;Dbxref=GenBank:WP_000450511.1;Name=WP_000450511.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=C9E95_RS15130;product=NAD-dependent malic enzyme;protein_id=WP_000450511.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 148199 149209 . + . ID=gene-C9E95_RS15135;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=C9E95_RS15135;old_locus_tag=C9E95_15510 NZ_PYJW01000137.1 Protein Homology CDS 148199 149209 . + 0 ID=cds-WP_000642447.1;Parent=gene-C9E95_RS15135;Dbxref=GenBank:WP_000642447.1;Name=WP_000642447.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460526.1;locus_tag=C9E95_RS15135;product=alcohol dehydrogenase AdhP;protein_id=WP_000642447.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 149300 149956 . - . ID=gene-C9E95_RS15140;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=C9E95_RS15140;old_locus_tag=C9E95_15515 NZ_PYJW01000137.1 Protein Homology CDS 149300 149956 . - 0 ID=cds-WP_000045657.1;Parent=gene-C9E95_RS15140;Dbxref=GenBank:WP_000045657.1;Name=WP_000045657.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460527.1;locus_tag=C9E95_RS15140;product=formate dehydrogenase-N subunit gamma;protein_id=WP_000045657.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 149949 150833 . - . ID=gene-C9E95_RS15145;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=C9E95_RS15145;old_locus_tag=C9E95_15520 NZ_PYJW01000137.1 Protein Homology CDS 149949 150833 . - 0 ID=cds-WP_000061599.1;Parent=gene-C9E95_RS15145;Dbxref=GenBank:WP_000061599.1;Name=WP_000061599.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460528.1;locus_tag=C9E95_RS15145;product=formate dehydrogenase subunit beta;protein_id=WP_000061599.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 150847 153894 . - . ID=gene-C9E95_RS15150;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=C9E95_RS15150;old_locus_tag=C9E95_15525 NZ_PYJW01000137.1 Protein Homology CDS 150847 153894 . - 0 ID=cds-WP_077684034.1;Parent=gene-C9E95_RS15150;Dbxref=GenBank:WP_077684034.1;Name=WP_077684034.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=C9E95_RS15150;product=formate dehydrogenase-N subunit alpha;protein_id=WP_077684034.1;transl_except=(pos:complement(153307..153309)%2Caa:Sec);transl_table=11 NZ_PYJW01000137.1 RefSeq gene 154172 155053 . + . ID=gene-C9E95_RS15155;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=C9E95_RS15155;old_locus_tag=C9E95_15530 NZ_PYJW01000137.1 Protein Homology CDS 154172 155053 . + 0 ID=cds-WP_000203795.1;Parent=gene-C9E95_RS15155;Dbxref=GenBank:WP_000203795.1;Name=WP_000203795.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203799.1;locus_tag=C9E95_RS15155;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WP_000203795.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 155577 156665 . + . ID=gene-C9E95_RS15165;Name=ompD;gbkey=Gene;gene=ompD;gene_biotype=protein_coding;locus_tag=C9E95_RS15165;old_locus_tag=C9E95_15540 NZ_PYJW01000137.1 Protein Homology CDS 155577 156665 . + 0 ID=cds-WP_000769035.1;Parent=gene-C9E95_RS15165;Dbxref=GenBank:WP_000769035.1;Name=WP_000769035.1;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=C9E95_RS15165;product=porin OmpD;protein_id=WP_000769035.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 156809 157189 . + . ID=gene-C9E95_RS15170;Name=C9E95_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15170;old_locus_tag=C9E95_15545 NZ_PYJW01000137.1 Protein Homology CDS 156809 157189 . + 0 ID=cds-WP_014343841.1;Parent=gene-C9E95_RS15170;Dbxref=GenBank:WP_014343841.1;Name=WP_014343841.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460532.3;locus_tag=C9E95_RS15170;product=GFA family protein;protein_id=WP_014343841.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 157214 158701 . - . ID=gene-C9E95_RS15175;Name=smvA;gbkey=Gene;gene=smvA;gene_biotype=protein_coding;locus_tag=C9E95_RS15175;old_locus_tag=C9E95_15550 NZ_PYJW01000137.1 Protein Homology CDS 157214 158701 . - 0 ID=cds-WP_000489734.1;Parent=gene-C9E95_RS15175;Dbxref=GenBank:WP_000489734.1;Name=WP_000489734.1;gbkey=CDS;gene=smvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460533.1;locus_tag=C9E95_RS15175;product=methyl viologen efflux MFS transporter SmvA;protein_id=WP_000489734.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 158819 159397 . + . ID=gene-C9E95_RS15180;Name=C9E95_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15180;old_locus_tag=C9E95_15555 NZ_PYJW01000137.1 Protein Homology CDS 158819 159397 . + 0 ID=cds-WP_000121044.1;Parent=gene-C9E95_RS15180;Dbxref=GenBank:WP_000121044.1;Name=WP_000121044.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460534.1;locus_tag=C9E95_RS15180;product=TetR family transcriptional regulator;protein_id=WP_000121044.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 159611 160999 . + . ID=gene-C9E95_RS15185;Name=C9E95_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15185;old_locus_tag=C9E95_15560 NZ_PYJW01000137.1 Protein Homology CDS 159611 160999 . + 0 ID=cds-WP_024154598.1;Parent=gene-C9E95_RS15185;Dbxref=GenBank:WP_024154598.1;Name=WP_024154598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460535.1;locus_tag=C9E95_RS15185;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_024154598.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 161091 164831 . + . ID=gene-C9E95_RS15190;Name=C9E95_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15190;old_locus_tag=C9E95_15565 NZ_PYJW01000137.1 Protein Homology CDS 161091 164831 . + 0 ID=cds-WP_080203911.1;Parent=gene-C9E95_RS15190;Dbxref=GenBank:WP_080203911.1;Name=WP_080203911.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=C9E95_RS15190;product=nitrate reductase subunit alpha;protein_id=WP_080203911.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 164828 166372 . + . ID=gene-C9E95_RS15195;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=C9E95_RS15195;old_locus_tag=C9E95_15570 NZ_PYJW01000137.1 Protein Homology CDS 164828 166372 . + 0 ID=cds-WP_000702595.1;Parent=gene-C9E95_RS15195;Dbxref=GenBank:WP_000702595.1;Name=WP_000702595.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460537.1;locus_tag=C9E95_RS15195;product=nitrate reductase subunit beta;protein_id=WP_000702595.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 166372 167067 . + . ID=gene-C9E95_RS15200;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=C9E95_RS15200;old_locus_tag=C9E95_15575 NZ_PYJW01000137.1 Protein Homology CDS 166372 167067 . + 0 ID=cds-WP_135369863.1;Parent=gene-C9E95_RS15200;Dbxref=GenBank:WP_135369863.1;Name=WP_135369863.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460538.1;locus_tag=C9E95_RS15200;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_135369863.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 167064 167744 . + . ID=gene-C9E95_RS15205;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=C9E95_RS15205;old_locus_tag=C9E95_15580 NZ_PYJW01000137.1 Protein Homology CDS 167064 167744 . + 0 ID=cds-WP_000617106.1;Parent=gene-C9E95_RS15205;Dbxref=GenBank:WP_000617106.1;Name=WP_000617106.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460539.1;locus_tag=C9E95_RS15205;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000617106.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 167850 168743 . + . ID=gene-C9E95_RS15210;Name=C9E95_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15210;old_locus_tag=C9E95_15585 NZ_PYJW01000137.1 Protein Homology CDS 167850 168743 . + 0 ID=cds-WP_080203913.1;Parent=gene-C9E95_RS15210;Dbxref=GenBank:WP_080203913.1;Name=WP_080203913.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460540.1;locus_tag=C9E95_RS15210;product=PhzF family isomerase;protein_id=WP_080203913.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 168779 169624 . - . ID=gene-C9E95_RS15215;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=C9E95_RS15215;old_locus_tag=C9E95_15590 NZ_PYJW01000137.1 Protein Homology CDS 168779 169624 . - 0 ID=cds-WP_061380083.1;Parent=gene-C9E95_RS15215;Dbxref=GenBank:WP_061380083.1;Name=WP_061380083.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460541.1;locus_tag=C9E95_RS15215;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_061380083.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 169907 170539 . - . ID=gene-C9E95_RS15220;Name=C9E95_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15220;old_locus_tag=C9E95_15595 NZ_PYJW01000137.1 Protein Homology CDS 169907 170539 . - 0 ID=cds-WP_001120854.1;Parent=gene-C9E95_RS15220;Dbxref=GenBank:WP_001120854.1;Name=WP_001120854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460542.1;locus_tag=C9E95_RS15220;product=hypothetical protein;protein_id=WP_001120854.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 171052 172545 . + . ID=gene-C9E95_RS15230;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=C9E95_RS15230;old_locus_tag=C9E95_15605 NZ_PYJW01000137.1 Protein Homology CDS 171052 172545 . + 0 ID=cds-WP_000857112.1;Parent=gene-C9E95_RS15230;Dbxref=GenBank:WP_000857112.1;Name=WP_000857112.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460543.1;locus_tag=C9E95_RS15230;product=L-asparagine permease;protein_id=WP_000857112.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 172622 172843 . - . ID=gene-C9E95_RS15235;Name=C9E95_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15235;old_locus_tag=C9E95_15610 NZ_PYJW01000137.1 Protein Homology CDS 172622 172843 . - 0 ID=cds-WP_000732362.1;Parent=gene-C9E95_RS15235;Dbxref=GenBank:WP_000732362.1;Name=WP_000732362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460544.1;locus_tag=C9E95_RS15235;product=YgdI/YgdR family lipoprotein;protein_id=WP_000732362.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 172988 174049 . - . ID=gene-C9E95_RS15240;Name=C9E95_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15240;old_locus_tag=C9E95_15615 NZ_PYJW01000137.1 Protein Homology CDS 172988 174049 . - 0 ID=cds-WP_000550641.1;Parent=gene-C9E95_RS15240;Dbxref=GenBank:WP_000550641.1;Name=WP_000550641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460545.1;locus_tag=C9E95_RS15240;product=YncE family protein;protein_id=WP_000550641.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 174313 176433 . + . ID=gene-C9E95_RS15245;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=protein_coding;locus_tag=C9E95_RS15245;old_locus_tag=C9E95_15620 NZ_PYJW01000137.1 Protein Homology CDS 174313 176433 . + 0 ID=cds-WP_000692038.1;Parent=gene-C9E95_RS15245;Dbxref=GenBank:WP_000692038.1;Name=WP_000692038.1;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460546.1;locus_tag=C9E95_RS15245;product=TonB-dependent receptor PqqU;protein_id=WP_000692038.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 176489 177154 . - . ID=gene-C9E95_RS15250;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=C9E95_RS15250;old_locus_tag=C9E95_15625 NZ_PYJW01000137.1 Protein Homology CDS 176489 177154 . - 0 ID=cds-WP_001119592.1;Parent=gene-C9E95_RS15250;Dbxref=GenBank:WP_001119592.1;Name=WP_001119592.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460547.1;locus_tag=C9E95_RS15250;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=WP_001119592.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 177488 178525 . - . ID=gene-C9E95_RS15255;Name=C9E95_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15255;old_locus_tag=C9E95_15630 NZ_PYJW01000137.1 Protein Homology CDS 177488 178525 . - 0 ID=cds-WP_001537345.1;Parent=gene-C9E95_RS15255;Dbxref=GenBank:WP_001537345.1;Name=WP_001537345.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517827.1;locus_tag=C9E95_RS15255;product=NADP-dependent oxidoreductase;protein_id=WP_001537345.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 178737 179252 . + . ID=gene-C9E95_RS15260;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=C9E95_RS15260;old_locus_tag=C9E95_15635 NZ_PYJW01000137.1 Protein Homology CDS 178737 179252 . + 0 ID=cds-WP_000155373.1;Parent=gene-C9E95_RS15260;Dbxref=GenBank:WP_000155373.1;Name=WP_000155373.1;Note=Keep exception level- 87%25 similar to E. coli K12 P76112%2C different gene symbol;gbkey=CDS;gene=mddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460549.1;locus_tag=C9E95_RS15260;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=WP_000155373.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 179252 179701 . + . ID=gene-C9E95_RS15265;Name=C9E95_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15265;old_locus_tag=C9E95_15640 NZ_PYJW01000137.1 Protein Homology CDS 179252 179701 . + 0 ID=cds-WP_001076571.1;Parent=gene-C9E95_RS15265;Dbxref=GenBank:WP_001076571.1;Name=WP_001076571.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460550.1;locus_tag=C9E95_RS15265;product=DMT family transporter;protein_id=WP_001076571.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 179706 179939 . - . ID=gene-C9E95_RS15270;Name=C9E95_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15270;old_locus_tag=C9E95_15645 NZ_PYJW01000137.1 Protein Homology CDS 179706 179939 . - 0 ID=cds-WP_080203684.1;Parent=gene-C9E95_RS15270;Dbxref=GenBank:WP_080203684.1;Name=WP_080203684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460551.1;locus_tag=C9E95_RS15270;product=YdcY family protein;protein_id=WP_080203684.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 180163 181482 . + . ID=gene-C9E95_RS15275;Name=srfA;gbkey=Gene;gene=srfA;gene_biotype=protein_coding;locus_tag=C9E95_RS15275;old_locus_tag=C9E95_15650 NZ_PYJW01000137.1 Protein Homology CDS 180163 181482 . + 0 ID=cds-WP_001129951.1;Parent=gene-C9E95_RS15275;Dbxref=GenBank:WP_001129951.1;Name=WP_001129951.1;gbkey=CDS;gene=srfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=C9E95_RS15275;product=virulence-associated effector SrfA;protein_id=WP_001129951.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 181487 184468 . + . ID=gene-C9E95_RS15280;Name=C9E95_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15280;old_locus_tag=C9E95_15655 NZ_PYJW01000137.1 Protein Homology CDS 181487 184468 . + 0 ID=cds-WP_000960830.1;Parent=gene-C9E95_RS15280;Dbxref=GenBank:WP_000960830.1;Name=WP_000960830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=C9E95_RS15280;product=virulence factor SrfB;protein_id=WP_000960830.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 184465 186609 . + . ID=gene-C9E95_RS15285;Name=srfC;gbkey=Gene;gene=srfC;gene_biotype=protein_coding;locus_tag=C9E95_RS15285;old_locus_tag=C9E95_15660 NZ_PYJW01000137.1 Protein Homology CDS 184465 186609 . + 0 ID=cds-WP_000165619.1;Parent=gene-C9E95_RS15285;Dbxref=GenBank:WP_000165619.1;Name=WP_000165619.1;gbkey=CDS;gene=srfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460554.1;locus_tag=C9E95_RS15285;product=virulence-associated effector SrfC;protein_id=WP_000165619.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 186654 186827 . - . ID=gene-C9E95_RS15290;Name=C9E95_RS15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15290;old_locus_tag=C9E95_15665 NZ_PYJW01000137.1 Protein Homology CDS 186654 186827 . - 0 ID=cds-WP_001522647.1;Parent=gene-C9E95_RS15290;Dbxref=GenBank:WP_001522647.1;Name=WP_001522647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=C9E95_RS15290;product=GhoT/OrtT family toxin;protein_id=WP_001522647.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 187026 187121 . + . ID=gene-C9E95_RS15295;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=C9E95_RS15295;old_locus_tag=C9E95_15670 NZ_PYJW01000137.1 Protein Homology CDS 187026 187121 . + 0 ID=cds-WP_001103198.1;Parent=gene-C9E95_RS15295;Dbxref=GenBank:WP_001103198.1;Name=WP_001103198.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103198.1;locus_tag=C9E95_RS15295;product=stress response membrane protein YncL;protein_id=WP_001103198.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 187226 188671 . - . ID=gene-C9E95_RS15300;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=C9E95_RS15300;old_locus_tag=C9E95_15675 NZ_PYJW01000137.1 Protein Homology CDS 187226 188671 . - 0 ID=cds-WP_000158094.1;Parent=gene-C9E95_RS15300;Dbxref=GenBank:WP_000158094.1;Name=WP_000158094.1;Ontology_term=GO:0009447,GO:0019145,GO:0051287;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase (NAD+) activity|0019145||IEA,NAD binding|0051287||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460556.3;locus_tag=C9E95_RS15300;product=aminobutyraldehyde dehydrogenase;protein_id=WP_000158094.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 188786 190210 . - . ID=gene-C9E95_RS15305;Name=ycdR;gbkey=Gene;gene=ycdR;gene_biotype=protein_coding;locus_tag=C9E95_RS15305;old_locus_tag=C9E95_15680 NZ_PYJW01000137.1 Protein Homology CDS 188786 190210 . - 0 ID=cds-WP_000760698.1;Parent=gene-C9E95_RS15305;Dbxref=GenBank:WP_000760698.1;Name=WP_000760698.1;gbkey=CDS;gene=ycdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460557.1;locus_tag=C9E95_RS15305;product=GntR family transcriptional regulator YdcR;protein_id=WP_000760698.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 190346 191116 . - . ID=gene-C9E95_RS15310;Name=C9E95_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15310;old_locus_tag=C9E95_15685 NZ_PYJW01000137.1 Protein Homology CDS 190346 191116 . - 0 ID=cds-WP_000237715.1;Parent=gene-C9E95_RS15310;Dbxref=GenBank:WP_000237715.1;Name=WP_000237715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460558.1;locus_tag=C9E95_RS15310;product=M15 family metallopeptidase;protein_id=WP_000237715.1;transl_table=11 NZ_PYJW01000137.1 RefSeq pseudogene 191375 191605 . - . ID=gene-C9E95_RS15315;Name=C9E95_RS15315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS15315;old_locus_tag=C9E95_15690;pseudo=true NZ_PYJW01000137.1 Protein Homology CDS 191375 191605 . - 0 ID=cds-C9E95_RS15315;Parent=gene-C9E95_RS15315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448018.1;locus_tag=C9E95_RS15315;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 191638 192036 . - . ID=gene-C9E95_RS15320;Name=C9E95_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15320;old_locus_tag=C9E95_15695 NZ_PYJW01000137.1 Protein Homology CDS 191638 192036 . - 0 ID=cds-WP_000747901.1;Parent=gene-C9E95_RS15320;Dbxref=GenBank:WP_000747901.1;Name=WP_000747901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460560.1;locus_tag=C9E95_RS15320;product=hypothetical protein;protein_id=WP_000747901.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 192552 193502 . + . ID=gene-C9E95_RS15325;Name=sifB;gbkey=Gene;gene=sifB;gene_biotype=protein_coding;locus_tag=C9E95_RS15325;old_locus_tag=C9E95_15700 NZ_PYJW01000137.1 Protein Homology CDS 192552 193502 . + 0 ID=cds-WP_080203683.1;Parent=gene-C9E95_RS15325;Dbxref=GenBank:WP_080203683.1;Name=WP_080203683.1;gbkey=CDS;gene=sifB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460561.1;locus_tag=C9E95_RS15325;product=SPI-2 type III secretion system effector SifB;protein_id=WP_080203683.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 193775 194005 . + . ID=gene-C9E95_RS15330;Name=C9E95_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15330;old_locus_tag=C9E95_15705 NZ_PYJW01000137.1 Protein Homology CDS 193775 194005 . + 0 ID=cds-WP_001537894.1;Parent=gene-C9E95_RS15330;Dbxref=GenBank:WP_001537894.1;Name=WP_001537894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460562.1;locus_tag=C9E95_RS15330;product=YncJ family protein;protein_id=WP_001537894.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 194006 195970 . - . ID=gene-C9E95_RS15335;Name=C9E95_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15335;old_locus_tag=C9E95_15710 NZ_PYJW01000137.1 Protein Homology CDS 194006 195970 . - 0 ID=cds-WP_001249745.1;Parent=gene-C9E95_RS15335;Dbxref=GenBank:WP_001249745.1;Name=WP_001249745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460563.1;locus_tag=C9E95_RS15335;product=peptidase U32 family protein;protein_id=WP_001249745.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 196049 196585 . - . ID=gene-C9E95_RS15340;Name=C9E95_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15340;old_locus_tag=C9E95_15715 NZ_PYJW01000137.1 Protein Homology CDS 196049 196585 . - 0 ID=cds-WP_023208751.1;Parent=gene-C9E95_RS15340;Dbxref=GenBank:WP_023208751.1;Name=WP_023208751.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460564.1;locus_tag=C9E95_RS15340;product=helix-turn-helix domain-containing protein;protein_id=WP_023208751.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 196677 197855 . + . ID=gene-C9E95_RS15345;Name=C9E95_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15345;old_locus_tag=C9E95_15720 NZ_PYJW01000137.1 Protein Homology CDS 196677 197855 . + 0 ID=cds-WP_045717715.1;Parent=gene-C9E95_RS15345;Dbxref=GenBank:WP_045717715.1;Name=WP_045717715.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460565.1;locus_tag=C9E95_RS15345;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_045717715.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 197909 198577 . - . ID=gene-C9E95_RS15350;Name=C9E95_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15350;old_locus_tag=C9E95_15725 NZ_PYJW01000137.1 Protein Homology CDS 197909 198577 . - 0 ID=cds-WP_080203682.1;Parent=gene-C9E95_RS15350;Dbxref=GenBank:WP_080203682.1;Name=WP_080203682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460566.1;locus_tag=C9E95_RS15350;product=DUF3313 domain-containing protein;protein_id=WP_080203682.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 198733 199329 . - . ID=gene-C9E95_RS15355;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=C9E95_RS15355;old_locus_tag=C9E95_15730 NZ_PYJW01000137.1 Protein Homology CDS 198733 199329 . - 0 ID=cds-WP_080203681.1;Parent=gene-C9E95_RS15355;Dbxref=GenBank:WP_080203681.1;Name=WP_080203681.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460567.1;locus_tag=C9E95_RS15355;product=tellurite resistance methyltransferase TehB;protein_id=WP_080203681.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 199316 200329 . - . ID=gene-C9E95_RS15360;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=C9E95_RS15360;old_locus_tag=C9E95_15735 NZ_PYJW01000137.1 Protein Homology CDS 199316 200329 . - 0 ID=cds-WP_001244002.1;Parent=gene-C9E95_RS15360;Dbxref=GenBank:WP_001244002.1;Name=WP_001244002.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460568.1;locus_tag=C9E95_RS15360;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_001244002.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 200436 201416 . + . ID=gene-C9E95_RS15365;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=C9E95_RS15365;old_locus_tag=C9E95_15740 NZ_PYJW01000137.1 Protein Homology CDS 200436 201416 . + 0 ID=cds-WP_080203680.1;Parent=gene-C9E95_RS15365;Dbxref=GenBank:WP_080203680.1;Name=WP_080203680.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460569.1;locus_tag=C9E95_RS15365;product=YdcK family protein;protein_id=WP_080203680.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 201413 201952 . - . ID=gene-C9E95_RS15370;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=C9E95_RS15370;old_locus_tag=C9E95_15745 NZ_PYJW01000137.1 Protein Homology CDS 201413 201952 . - 0 ID=cds-WP_000229306.1;Parent=gene-C9E95_RS15370;Dbxref=GenBank:WP_000229306.1;Name=WP_000229306.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460570.1;locus_tag=C9E95_RS15370;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_000229306.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 202169 203287 . + . ID=gene-C9E95_RS15375;Name=C9E95_RS15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15375;old_locus_tag=C9E95_15750 NZ_PYJW01000137.1 Protein Homology CDS 202169 203287 . + 0 ID=cds-WP_080203679.1;Parent=gene-C9E95_RS15375;Dbxref=GenBank:WP_080203679.1;Name=WP_080203679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460571.1;locus_tag=C9E95_RS15375;product=M42 family metallopeptidase;protein_id=WP_080203679.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 203284 203565 . + . ID=gene-C9E95_RS15380;Name=sgcB;gbkey=Gene;gene=sgcB;gene_biotype=protein_coding;locus_tag=C9E95_RS15380;old_locus_tag=C9E95_15755 NZ_PYJW01000137.1 Protein Homology CDS 203284 203565 . + 0 ID=cds-WP_000976132.1;Parent=gene-C9E95_RS15380;Dbxref=GenBank:WP_000976132.1;Name=WP_000976132.1;gbkey=CDS;gene=sgcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460572.1;locus_tag=C9E95_RS15380;product=PTS sugar transporter subunit IIB SgcB;protein_id=WP_000976132.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 203576 204889 . + . ID=gene-C9E95_RS15385;Name=sgcC;gbkey=Gene;gene=sgcC;gene_biotype=protein_coding;locus_tag=C9E95_RS15385;old_locus_tag=C9E95_15760 NZ_PYJW01000137.1 Protein Homology CDS 203576 204889 . + 0 ID=cds-WP_045717713.1;Parent=gene-C9E95_RS15385;Dbxref=GenBank:WP_045717713.1;Name=WP_045717713.1;gbkey=CDS;gene=sgcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460573.1;locus_tag=C9E95_RS15385;product=PTS sugar transporter subunit IIC SgcC;protein_id=WP_045717713.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 204903 205709 . + . ID=gene-C9E95_RS15390;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=C9E95_RS15390;old_locus_tag=C9E95_15765 NZ_PYJW01000137.1 Protein Homology CDS 204903 205709 . + 0 ID=cds-WP_031605312.1;Parent=gene-C9E95_RS15390;Dbxref=GenBank:WP_031605312.1;Name=WP_031605312.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460574.1;locus_tag=C9E95_RS15390;product=BtpA family protein SgcQ;protein_id=WP_031605312.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 205841 206278 . + . ID=gene-C9E95_RS15395;Name=sgcA;gbkey=Gene;gene=sgcA;gene_biotype=protein_coding;locus_tag=C9E95_RS15395;old_locus_tag=C9E95_15770 NZ_PYJW01000137.1 Protein Homology CDS 205841 206278 . + 0 ID=cds-WP_000606458.1;Parent=gene-C9E95_RS15395;Dbxref=GenBank:WP_000606458.1;Name=WP_000606458.1;gbkey=CDS;gene=sgcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460575.1;locus_tag=C9E95_RS15395;product=SgcA family PTS sugar transporter subunit IIA;protein_id=WP_000606458.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 206290 206922 . + . ID=gene-C9E95_RS15400;Name=C9E95_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15400;old_locus_tag=C9E95_15775 NZ_PYJW01000137.1 Protein Homology CDS 206290 206922 . + 0 ID=cds-WP_023218172.1;Parent=gene-C9E95_RS15400;Dbxref=GenBank:WP_023218172.1;Name=WP_023218172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460576.1;locus_tag=C9E95_RS15400;product=ribulose-phosphate 3 epimerase family protein;protein_id=WP_023218172.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 206938 207729 . + . ID=gene-C9E95_RS15405;Name=C9E95_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15405;old_locus_tag=C9E95_15780 NZ_PYJW01000137.1 Protein Homology CDS 206938 207729 . + 0 ID=cds-WP_001670738.1;Parent=gene-C9E95_RS15405;Dbxref=GenBank:WP_001670738.1;Name=WP_001670738.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460577.1;locus_tag=C9E95_RS15405;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001670738.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 207729 208166 . + . ID=gene-C9E95_RS15410;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=C9E95_RS15410;old_locus_tag=C9E95_15785 NZ_PYJW01000137.1 Protein Homology CDS 207729 208166 . + 0 ID=cds-WP_076735634.1;Parent=gene-C9E95_RS15410;Dbxref=GenBank:WP_076735634.1;Name=WP_076735634.1;gbkey=CDS;gene=aac(6');inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=C9E95_RS15410;product=cryptic aminoglycoside N-acetyltransferase AAC(6')-Iy/Iaa;protein_id=WP_076735634.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 208221 209423 . - . ID=gene-C9E95_RS15415;Name=C9E95_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15415;old_locus_tag=C9E95_15790 NZ_PYJW01000137.1 Protein Homology CDS 208221 209423 . - 0 ID=cds-WP_080203678.1;Parent=gene-C9E95_RS15415;Dbxref=GenBank:WP_080203678.1;Name=WP_080203678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460579.1;locus_tag=C9E95_RS15415;product=lactate oxidase;protein_id=WP_080203678.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 209435 210010 . - . ID=gene-C9E95_RS15420;Name=C9E95_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15420;old_locus_tag=C9E95_15795 NZ_PYJW01000137.1 Protein Homology CDS 209435 210010 . - 0 ID=cds-WP_079942433.1;Parent=gene-C9E95_RS15420;Dbxref=GenBank:WP_079942433.1;Name=WP_079942433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460580.1;locus_tag=C9E95_RS15420;product=YceI family protein;protein_id=WP_079942433.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 210206 211861 . - . ID=gene-C9E95_RS15425;Name=C9E95_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15425;old_locus_tag=C9E95_15800 NZ_PYJW01000137.1 Protein Homology CDS 210206 211861 . - 0 ID=cds-WP_053445245.1;Parent=gene-C9E95_RS15425;Dbxref=GenBank:WP_053445245.1;Name=WP_053445245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460581.1;locus_tag=C9E95_RS15425;product=glucan biosynthesis protein D;protein_id=WP_053445245.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 212081 213589 . - . ID=gene-C9E95_RS15430;Name=C9E95_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15430;old_locus_tag=C9E95_15805 NZ_PYJW01000137.1 Protein Homology CDS 212081 213589 . - 0 ID=cds-WP_045900231.1;Parent=gene-C9E95_RS15430;Dbxref=GenBank:WP_045900231.1;Name=WP_045900231.1;Ontology_term=GO:0016298,GO:0052689;gbkey=CDS;go_function=lipase activity|0016298||IEA,carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460582.1;locus_tag=C9E95_RS15430;product=carboxylesterase/lipase family protein;protein_id=WP_045900231.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 213638 214981 . - . ID=gene-C9E95_RS15435;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=C9E95_RS15435;old_locus_tag=C9E95_15810 NZ_PYJW01000137.1 Protein Homology CDS 213638 214981 . - 0 ID=cds-WP_023258967.1;Parent=gene-C9E95_RS15435;Dbxref=GenBank:WP_023258967.1;Name=WP_023258967.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=C9E95_RS15435;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=WP_023258967.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 215274 216197 . + . ID=gene-C9E95_RS15440;Name=C9E95_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15440;old_locus_tag=C9E95_15815 NZ_PYJW01000137.1 Protein Homology CDS 215274 216197 . + 0 ID=cds-WP_000414259.1;Parent=gene-C9E95_RS15440;Dbxref=GenBank:WP_000414259.1;Name=WP_000414259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460584.1;locus_tag=C9E95_RS15440;product=LysR substrate-binding domain-containing protein;protein_id=WP_000414259.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 216258 217883 . - . ID=gene-C9E95_RS15445;Name=C9E95_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15445;old_locus_tag=C9E95_15820 NZ_PYJW01000137.1 Protein Homology CDS 216258 217883 . - 0 ID=cds-WP_000528480.1;Parent=gene-C9E95_RS15445;Dbxref=GenBank:WP_000528480.1;Name=WP_000528480.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=C9E95_RS15445;product=methyl-accepting chemotaxis protein;protein_id=WP_000528480.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 218052 219170 . - . ID=gene-C9E95_RS15455;Name=C9E95_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15455;old_locus_tag=C9E95_15830 NZ_PYJW01000137.1 Protein Homology CDS 218052 219170 . - 0 ID=cds-WP_000842135.1;Parent=gene-C9E95_RS15455;Dbxref=GenBank:WP_000842135.1;Name=WP_000842135.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=C9E95_RS15455;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_000842135.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 219202 219477 . - . ID=gene-C9E95_RS15460;Name=C9E95_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15460;old_locus_tag=C9E95_15835 NZ_PYJW01000137.1 Protein Homology CDS 219202 219477 . - 0 ID=cds-WP_001120770.1;Parent=gene-C9E95_RS15460;Dbxref=GenBank:WP_001120770.1;Name=WP_001120770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=C9E95_RS15460;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_001120770.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 220000 220401 . + . ID=gene-C9E95_RS15465;Name=steB;gbkey=Gene;gene=steB;gene_biotype=protein_coding;locus_tag=C9E95_RS15465;old_locus_tag=C9E95_15840 NZ_PYJW01000137.1 Protein Homology CDS 220000 220401 . + 0 ID=cds-WP_001540100.1;Parent=gene-C9E95_RS15465;Dbxref=GenBank:WP_001540100.1;Name=WP_001540100.1;gbkey=CDS;gene=steB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448047.1;locus_tag=C9E95_RS15465;product=type III secretion system effector SteB;protein_id=WP_001540100.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 220530 221246 . - . ID=gene-C9E95_RS15470;Name=C9E95_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15470;old_locus_tag=C9E95_15845 NZ_PYJW01000137.1 Protein Homology CDS 220530 221246 . - 0 ID=cds-WP_000997195.1;Parent=gene-C9E95_RS15470;Dbxref=GenBank:WP_000997195.1;Name=WP_000997195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460589.1;locus_tag=C9E95_RS15470;product=membrane protein;protein_id=WP_000997195.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 221672 222898 . + . ID=gene-C9E95_RS15475;Name=sseJ;gbkey=Gene;gene=sseJ;gene_biotype=protein_coding;locus_tag=C9E95_RS15475;old_locus_tag=C9E95_15850 NZ_PYJW01000137.1 Protein Homology CDS 221672 222898 . + 0 ID=cds-WP_023993289.1;Parent=gene-C9E95_RS15475;Dbxref=GenBank:WP_023993289.1;Name=WP_023993289.1;gbkey=CDS;gene=sseJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460590.1;locus_tag=C9E95_RS15475;product=SPI-2 type III secretion system effector SseJ;protein_id=WP_023993289.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 223019 223363 . - . ID=gene-C9E95_RS15480;Name=C9E95_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15480;old_locus_tag=C9E95_15855 NZ_PYJW01000137.1 Protein Homology CDS 223019 223363 . - 0 ID=cds-WP_000281185.1;Parent=gene-C9E95_RS15480;Dbxref=GenBank:WP_000281185.1;Name=WP_000281185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460591.1;locus_tag=C9E95_RS15480;product=DUF1294 domain-containing protein;protein_id=WP_000281185.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 224270 225031 . + . ID=gene-C9E95_RS15485;Name=C9E95_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15485;old_locus_tag=C9E95_15860 NZ_PYJW01000137.1 Protein Homology CDS 224270 225031 . + 0 ID=cds-WP_000949370.1;Parent=gene-C9E95_RS15485;Dbxref=GenBank:WP_000949370.1;Name=WP_000949370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460592.1;locus_tag=C9E95_RS15485;product=transporter substrate-binding domain-containing protein;protein_id=WP_000949370.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 225038 225685 . + . ID=gene-C9E95_RS15490;Name=C9E95_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15490;old_locus_tag=C9E95_15865 NZ_PYJW01000137.1 Protein Homology CDS 225038 225685 . + 0 ID=cds-WP_000094446.1;Parent=gene-C9E95_RS15490;Dbxref=GenBank:WP_000094446.1;Name=WP_000094446.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460593.1;locus_tag=C9E95_RS15490;product=amino acid ABC transporter permease;protein_id=WP_000094446.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 225710 226441 . + . ID=gene-C9E95_RS15495;Name=C9E95_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15495;old_locus_tag=C9E95_15870 NZ_PYJW01000137.1 Protein Homology CDS 225710 226441 . + 0 ID=cds-WP_001196340.1;Parent=gene-C9E95_RS15495;Dbxref=GenBank:WP_001196340.1;Name=WP_001196340.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460594.1;locus_tag=C9E95_RS15495;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_001196340.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 226438 227118 . + . ID=gene-C9E95_RS15500;Name=C9E95_RS15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15500;old_locus_tag=C9E95_15875 NZ_PYJW01000137.1 Protein Homology CDS 226438 227118 . + 0 ID=cds-WP_000560166.1;Parent=gene-C9E95_RS15500;Dbxref=GenBank:WP_000560166.1;Name=WP_000560166.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460595.1;locus_tag=C9E95_RS15500;product=amino acid ABC transporter permease;protein_id=WP_000560166.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 227255 228805 . + . ID=gene-C9E95_RS15505;Name=C9E95_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15505;old_locus_tag=C9E95_15880 NZ_PYJW01000137.1 Protein Homology CDS 227255 228805 . + 0 ID=cds-WP_001537477.1;Parent=gene-C9E95_RS15505;Dbxref=GenBank:WP_001537477.1;Name=WP_001537477.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460596.1;locus_tag=C9E95_RS15505;product=glycosyltransferase family 39 protein;protein_id=WP_001537477.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 229269 229931 . + . ID=gene-C9E95_RS15510;Name=C9E95_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15510;old_locus_tag=C9E95_15885 NZ_PYJW01000137.1 Protein Homology CDS 229269 229931 . + 0 ID=cds-WP_001520112.1;Parent=gene-C9E95_RS15510;Dbxref=GenBank:WP_001520112.1;Name=WP_001520112.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551832.1;locus_tag=C9E95_RS15510;product=class I SAM-dependent methyltransferase;protein_id=WP_001520112.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 230202 230732 . - . ID=gene-C9E95_RS15515;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=C9E95_RS15515;old_locus_tag=C9E95_15890 NZ_PYJW01000137.1 Protein Homology CDS 230202 230732 . - 0 ID=cds-WP_000527277.1;Parent=gene-C9E95_RS15515;Dbxref=GenBank:WP_000527277.1;Name=WP_000527277.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460598.1;locus_tag=C9E95_RS15515;product=cytochrome b561;protein_id=WP_000527277.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 230849 231649 . - . ID=gene-C9E95_RS15520;Name=C9E95_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15520;old_locus_tag=C9E95_15895 NZ_PYJW01000137.1 Protein Homology CDS 230849 231649 . - 0 ID=cds-WP_001098512.1;Parent=gene-C9E95_RS15520;Dbxref=GenBank:WP_001098512.1;Name=WP_001098512.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460599.1;locus_tag=C9E95_RS15520;product=YdcF family protein;protein_id=WP_001098512.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 231713 235615 . - . ID=gene-C9E95_RS15525;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=C9E95_RS15525;old_locus_tag=C9E95_15900 NZ_PYJW01000137.1 Protein Homology CDS 231713 235615 . - 0 ID=cds-WP_024133394.1;Parent=gene-C9E95_RS15525;Dbxref=GenBank:WP_024133394.1;Name=WP_024133394.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=C9E95_RS15525;product=ATP-dependent RNA helicase HrpA;protein_id=WP_024133394.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 235816 236421 . + . ID=gene-C9E95_RS15530;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=C9E95_RS15530;old_locus_tag=C9E95_15905 NZ_PYJW01000137.1 Protein Homology CDS 235816 236421 . + 0 ID=cds-WP_000048924.1;Parent=gene-C9E95_RS15530;Dbxref=GenBank:WP_000048924.1;Name=WP_000048924.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460601.1;locus_tag=C9E95_RS15530;product=FMN-dependent NADH-azoreductase;protein_id=WP_000048924.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 236418 236867 . - . ID=gene-C9E95_RS15535;Name=C9E95_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15535;old_locus_tag=C9E95_15910 NZ_PYJW01000137.1 Protein Homology CDS 236418 236867 . - 0 ID=cds-WP_001518898.1;Parent=gene-C9E95_RS15535;Dbxref=GenBank:WP_001518898.1;Name=WP_001518898.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460602.1;locus_tag=C9E95_RS15535;product=GFA family protein;protein_id=WP_001518898.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 237010 237333 . - . ID=gene-C9E95_RS15540;Name=C9E95_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15540;old_locus_tag=C9E95_15915 NZ_PYJW01000137.1 Protein Homology CDS 237010 237333 . - 0 ID=cds-WP_000760345.1;Parent=gene-C9E95_RS15540;Dbxref=GenBank:WP_000760345.1;Name=WP_000760345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460603.1;locus_tag=C9E95_RS15540;product=YdbL family protein;protein_id=WP_000760345.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 237341 237532 . - . ID=gene-C9E95_RS15545;Name=C9E95_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15545;old_locus_tag=C9E95_15920 NZ_PYJW01000137.1 Protein Homology CDS 237341 237532 . - 0 ID=cds-WP_000784063.1;Parent=gene-C9E95_RS15545;Dbxref=GenBank:WP_000784063.1;Name=WP_000784063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460604.1;locus_tag=C9E95_RS15545;product=YnbE family lipoprotein;protein_id=WP_000784063.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 237532 240168 . - . ID=gene-C9E95_RS15550;Name=C9E95_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15550;old_locus_tag=C9E95_15925 NZ_PYJW01000137.1 Protein Homology CDS 237532 240168 . - 0 ID=cds-WP_080203677.1;Parent=gene-C9E95_RS15550;Dbxref=GenBank:WP_080203677.1;Name=WP_080203677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460605.1;locus_tag=C9E95_RS15550;product=YdbH family protein;protein_id=WP_080203677.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 240408 241397 . + . ID=gene-C9E95_RS15555;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=C9E95_RS15555;old_locus_tag=C9E95_15930 NZ_PYJW01000137.1 Protein Homology CDS 240408 241397 . + 0 ID=cds-WP_000762206.1;Parent=gene-C9E95_RS15555;Dbxref=GenBank:WP_000762206.1;Name=WP_000762206.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460606.1;locus_tag=C9E95_RS15555;product=D-lactate dehydrogenase;protein_id=WP_000762206.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 241508 241918 . + . ID=gene-C9E95_RS15560;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=C9E95_RS15560;old_locus_tag=C9E95_15935 NZ_PYJW01000137.1 Protein Homology CDS 241508 241918 . + 0 ID=cds-WP_000725242.1;Parent=gene-C9E95_RS15560;Dbxref=GenBank:WP_000725242.1;Name=WP_000725242.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460607.1;locus_tag=C9E95_RS15560;product=heat shock protein HslJ;protein_id=WP_000725242.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 241962 242228 . - . ID=gene-C9E95_RS15565;Name=C9E95_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15565;old_locus_tag=C9E95_15940 NZ_PYJW01000137.1 Protein Homology CDS 241962 242228 . - 0 ID=cds-WP_001200679.1;Parent=gene-C9E95_RS15565;Dbxref=GenBank:WP_001200679.1;Name=WP_001200679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=C9E95_RS15565;product=putative hemolysin;protein_id=WP_001200679.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 242144 242443 . + . ID=gene-C9E95_RS15570;Name=C9E95_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15570;old_locus_tag=C9E95_15945 NZ_PYJW01000137.1 Protein Homology CDS 242144 242443 . + 0 ID=cds-WP_001137722.1;Parent=gene-C9E95_RS15570;Dbxref=GenBank:WP_001137722.1;Name=WP_001137722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460609.1;locus_tag=C9E95_RS15570;product=hypothetical protein;protein_id=WP_001137722.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 242504 246028 . + . ID=gene-C9E95_RS15575;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=C9E95_RS15575;old_locus_tag=C9E95_15950 NZ_PYJW01000137.1 Protein Homology CDS 242504 246028 . + 0 ID=cds-WP_001193248.1;Parent=gene-C9E95_RS15575;Dbxref=GenBank:WP_001193248.1;Name=WP_001193248.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460610.1;locus_tag=C9E95_RS15575;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_001193248.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 246510 246944 . + . ID=gene-C9E95_RS15580;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=C9E95_RS15580;old_locus_tag=C9E95_15960 NZ_PYJW01000137.1 Protein Homology CDS 246510 246944 . + 0 ID=cds-WP_001082296.1;Parent=gene-C9E95_RS15580;Dbxref=GenBank:WP_001082296.1;Name=WP_001082296.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460611.1;locus_tag=C9E95_RS15580;product=universal stress protein UspF;protein_id=WP_001082296.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 246994 247332 . - . ID=gene-C9E95_RS15585;Name=C9E95_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15585;old_locus_tag=C9E95_15965 NZ_PYJW01000137.1 Protein Homology CDS 246994 247332 . - 0 ID=cds-WP_000159240.1;Parent=gene-C9E95_RS15585;Dbxref=GenBank:WP_000159240.1;Name=WP_000159240.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460612.1;locus_tag=C9E95_RS15585;product=SMR family transporter;protein_id=WP_000159240.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 247325 247477 . - . ID=gene-C9E95_RS23675;Name=C9E95_RS23675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23675;old_locus_tag=C9E95_15970 NZ_PYJW01000137.1 Protein Homology CDS 247325 247477 . - 0 ID=cds-WP_000089155.1;Parent=gene-C9E95_RS23675;Dbxref=GenBank:WP_000089155.1;Name=WP_000089155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465579.1;locus_tag=C9E95_RS23675;product=hypothetical protein;protein_id=WP_000089155.1;transl_table=11 NZ_PYJW01000137.1 RefSeq pseudogene 247433 247636 . + . ID=gene-C9E95_RS15595;Name=C9E95_RS15595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS15595;old_locus_tag=C9E95_15975;partial=true;pseudo=true;start_range=.,247433 NZ_PYJW01000137.1 Protein Homology CDS 247433 247636 . + 0 ID=cds-C9E95_RS15595;Parent=gene-C9E95_RS15595;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=C9E95_RS15595;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,247433;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 247688 248623 . + . ID=gene-C9E95_RS15600;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=C9E95_RS15600;old_locus_tag=C9E95_15980 NZ_PYJW01000137.1 Protein Homology CDS 247688 248623 . + 0 ID=cds-WP_001156218.1;Parent=gene-C9E95_RS15600;Dbxref=GenBank:WP_001156218.1;Name=WP_001156218.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460613.1;locus_tag=C9E95_RS15600;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_001156218.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 248667 250040 . - . ID=gene-C9E95_RS15605;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=C9E95_RS15605;old_locus_tag=C9E95_15985 NZ_PYJW01000137.1 Protein Homology CDS 248667 250040 . - 0 ID=cds-WP_023993294.1;Parent=gene-C9E95_RS15605;Dbxref=GenBank:WP_023993294.1;Name=WP_023993294.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=C9E95_RS15605;product=ATP-dependent RNA helicase DbpA;protein_id=WP_023993294.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 250069 250251 . - . ID=gene-C9E95_RS23800;Name=C9E95_RS23800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23800;old_locus_tag=C9E95_15990 NZ_PYJW01000137.1 Protein Homology CDS 250069 250251 . - 0 ID=cds-WP_015405931.1;Parent=gene-C9E95_RS23800;Dbxref=GenBank:WP_015405931.1;Name=WP_015405931.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048180.1;locus_tag=C9E95_RS23800;product=hypothetical protein;protein_id=WP_015405931.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 250527 251510 . - . ID=gene-C9E95_RS15615;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=C9E95_RS15615;old_locus_tag=C9E95_15995 NZ_PYJW01000137.1 Protein Homology CDS 250527 251510 . - 0 ID=cds-WP_000387373.1;Parent=gene-C9E95_RS15615;Dbxref=GenBank:WP_000387373.1;Name=WP_000387373.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460615.1;locus_tag=C9E95_RS15615;product=zinc transporter ZntB;protein_id=WP_000387373.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 251656 252810 . - . ID=gene-C9E95_RS15620;Name=C9E95_RS15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15620;old_locus_tag=C9E95_16000 NZ_PYJW01000137.1 Protein Homology CDS 251656 252810 . - 0 ID=cds-WP_023993295.1;Parent=gene-C9E95_RS15620;Dbxref=GenBank:WP_023993295.1;Name=WP_023993295.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460616.1;locus_tag=C9E95_RS15620;product=methyl-accepting chemotaxis protein;protein_id=WP_023993295.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 253203 253766 . - . ID=gene-C9E95_RS15625;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=C9E95_RS15625;old_locus_tag=C9E95_16005 NZ_PYJW01000137.1 Protein Homology CDS 253203 253766 . - 0 ID=cds-WP_001046799.1;Parent=gene-C9E95_RS15625;Dbxref=GenBank:WP_001046799.1;Name=WP_001046799.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460617.1;locus_tag=C9E95_RS15625;product=DNA endonuclease SmrA;protein_id=WP_001046799.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 254024 254539 . + . ID=gene-C9E95_RS15630;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=C9E95_RS15630;old_locus_tag=C9E95_16010 NZ_PYJW01000137.1 Protein Homology CDS 254024 254539 . + 0 ID=cds-WP_000945036.1;Parent=gene-C9E95_RS15630;Dbxref=GenBank:WP_000945036.1;Name=WP_000945036.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460618.1;locus_tag=C9E95_RS15630;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000945036.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 254735 255487 . + . ID=gene-C9E95_RS15635;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=C9E95_RS15635;old_locus_tag=C9E95_16015 NZ_PYJW01000137.1 Protein Homology CDS 254735 255487 . + 0 ID=cds-WP_000611914.1;Parent=gene-C9E95_RS15635;Dbxref=GenBank:WP_000611914.1;Name=WP_000611914.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=C9E95_RS15635;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000611914.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 255638 256585 . + . ID=gene-C9E95_RS15640;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=C9E95_RS15640;old_locus_tag=C9E95_16020 NZ_PYJW01000137.1 Protein Homology CDS 255638 256585 . + 0 ID=cds-WP_001262138.1;Parent=gene-C9E95_RS15640;Dbxref=GenBank:WP_001262138.1;Name=WP_001262138.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460620.1;locus_tag=C9E95_RS15640;product=universal stress protein UspE;protein_id=WP_001262138.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 256640 256894 . - . ID=gene-C9E95_RS15645;Name=C9E95_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15645;old_locus_tag=C9E95_16025 NZ_PYJW01000137.1 Protein Homology CDS 256640 256894 . - 0 ID=cds-WP_000605339.1;Parent=gene-C9E95_RS15645;Dbxref=GenBank:WP_000605339.1;Name=WP_000605339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460621.1;locus_tag=C9E95_RS15645;product=DUF2534 family protein;protein_id=WP_000605339.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 257133 258164 . + . ID=gene-C9E95_RS15650;Name=C9E95_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15650;old_locus_tag=C9E95_16030 NZ_PYJW01000137.1 Protein Homology CDS 257133 258164 . + 0 ID=cds-WP_000493665.1;Parent=gene-C9E95_RS15650;Dbxref=GenBank:WP_000493665.1;Name=WP_000493665.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460622.1;locus_tag=C9E95_RS15650;product=mechanosensitive ion channel family protein;protein_id=WP_000493665.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 258246 258848 . - . ID=gene-C9E95_RS15655;Name=C9E95_RS15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15655;old_locus_tag=C9E95_16035 NZ_PYJW01000137.1 Protein Homology CDS 258246 258848 . - 0 ID=cds-WP_000163362.1;Parent=gene-C9E95_RS15655;Dbxref=GenBank:WP_000163362.1;Name=WP_000163362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460623.1;locus_tag=C9E95_RS15655;product=helix-turn-helix domain-containing protein;protein_id=WP_000163362.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 258892 259578 . + . ID=gene-C9E95_RS15660;Name=C9E95_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15660;old_locus_tag=C9E95_16040 NZ_PYJW01000137.1 Protein Homology CDS 258892 259578 . + 0 ID=cds-WP_000097251.1;Parent=gene-C9E95_RS15660;Dbxref=GenBank:WP_000097251.1;Name=WP_000097251.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460624.1;locus_tag=C9E95_RS15660;product=B3/B4 domain-containing protein;protein_id=WP_000097251.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 259606 259944 . + . ID=gene-C9E95_RS15665;Name=C9E95_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15665;old_locus_tag=C9E95_16045 NZ_PYJW01000137.1 Protein Homology CDS 259606 259944 . + 0 ID=cds-WP_000051812.1;Parent=gene-C9E95_RS15665;Dbxref=GenBank:WP_000051812.1;Name=WP_000051812.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051808.1;locus_tag=C9E95_RS15665;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_000051812.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 260050 260607 . - . ID=gene-C9E95_RS15670;Name=C9E95_RS15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS15670;old_locus_tag=C9E95_16050 NZ_PYJW01000137.1 Protein Homology CDS 260050 260607 . - 0 ID=cds-WP_023993296.1;Parent=gene-C9E95_RS15670;Dbxref=GenBank:WP_023993296.1;Name=WP_023993296.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460625.1;locus_tag=C9E95_RS15670;product=redoxin family protein;protein_id=WP_023993296.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 260706 261536 . - . ID=gene-C9E95_RS15675;Name=zirS;gbkey=Gene;gene=zirS;gene_biotype=protein_coding;locus_tag=C9E95_RS15675;old_locus_tag=C9E95_16055 NZ_PYJW01000137.1 Protein Homology CDS 260706 261536 . - 0 ID=cds-WP_001242934.1;Parent=gene-C9E95_RS15675;Dbxref=GenBank:WP_001242934.1;Name=WP_001242934.1;gbkey=CDS;gene=zirS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460626.1;locus_tag=C9E95_RS15675;product=two-partner-like secretion system exoprotein ZirS;protein_id=WP_001242934.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 261557 263539 . - . ID=gene-C9E95_RS15680;Name=zirT;gbkey=Gene;gene=zirT;gene_biotype=protein_coding;locus_tag=C9E95_RS15680;old_locus_tag=C9E95_16060 NZ_PYJW01000137.1 Protein Homology CDS 261557 263539 . - 0 ID=cds-WP_000232023.1;Parent=gene-C9E95_RS15680;Dbxref=GenBank:WP_000232023.1;Name=WP_000232023.1;gbkey=CDS;gene=zirT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460627.1;locus_tag=C9E95_RS15680;product=two-partner secretion translocator ZirT;protein_id=WP_000232023.1;transl_table=11 NZ_PYJW01000137.1 RefSeq gene 263614 264459 . - . ID=gene-C9E95_RS15685;Name=zirU;gbkey=Gene;gene=zirU;gene_biotype=protein_coding;locus_tag=C9E95_RS15685;old_locus_tag=C9E95_16065 NZ_PYJW01000137.1 Protein Homology CDS 263614 264459 . - 0 ID=cds-WP_000273683.1;Parent=gene-C9E95_RS15685;Dbxref=GenBank:WP_000273683.1;Name=WP_000273683.1;gbkey=CDS;gene=zirU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460628.1;locus_tag=C9E95_RS15685;product=two-partner-like secretion system exoprotein ZirU;protein_id=WP_000273683.1;transl_table=11 ##sequence-region NZ_PYJW01000129.1 1 1037 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000129.1 RefSeq region 1 1037 . + . ID=NZ_PYJW01000129.1:1..1037;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000129.1 RefSeq pseudogene 1 136 . + . ID=gene-C9E95_RS23785;Name=tinR;gbkey=Gene;gene=tinR;gene_biotype=pseudogene;locus_tag=C9E95_RS23785;old_locus_tag=C9E95_14010;partial=true;pseudo=true;start_range=.,1 NZ_PYJW01000129.1 Protein Homology CDS 1 136 . + 1 ID=cds-C9E95_RS23785;Parent=gene-C9E95_RS23785;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=tinR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219490.1;locus_tag=C9E95_RS23785;partial=true;product=Lrp/AsnC family transcriptional regulator TinR;pseudo=true;start_range=.,1;transl_table=11 NZ_PYJW01000129.1 RefSeq gene 276 893 . + . ID=gene-C9E95_RS13670;Name=tioA;gbkey=Gene;gene=tioA;gene_biotype=protein_coding;locus_tag=C9E95_RS13670;old_locus_tag=C9E95_14015 NZ_PYJW01000129.1 Protein Homology CDS 276 893 . + 0 ID=cds-WP_000241747.1;Parent=gene-C9E95_RS13670;Dbxref=GenBank:WP_000241747.1;Name=WP_000241747.1;gbkey=CDS;gene=tioA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241754.1;locus_tag=C9E95_RS13670;product=protein TioA;protein_id=WP_000241747.1;transl_table=11 ##sequence-region NZ_PYJW01000125.1 1 1017 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000125.1 RefSeq region 1 1017 . + . ID=NZ_PYJW01000125.1:1..1017;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000125.1 RefSeq pseudogene 1 875 . - . ID=gene-C9E95_RS13420;Name=C9E95_RS13420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS13420;old_locus_tag=C9E95_13760;partial=true;pseudo=true;start_range=.,1 NZ_PYJW01000125.1 Protein Homology CDS 1 875 . - 0 ID=cds-C9E95_RS13420;Parent=gene-C9E95_RS13420;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000969800.1;locus_tag=C9E95_RS13420;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_PYJW01000125.1 RefSeq pseudogene 872 1017 . - . ID=gene-C9E95_RS13425;Name=C9E95_RS13425;end_range=1017,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS13425;old_locus_tag=C9E95_13765;partial=true;pseudo=true NZ_PYJW01000125.1 Protein Homology CDS 872 1017 . - 2 ID=cds-C9E95_RS13425;Parent=gene-C9E95_RS13425;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1017,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539380.1;locus_tag=C9E95_RS13425;partial=true;product=glycosyltransferase;pseudo=true;transl_table=11 ##sequence-region NZ_PYJW01000166.1 1 293 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000166.1 RefSeq region 1 293 . + . ID=NZ_PYJW01000166.1:1..293;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000166.1 RefSeq gene 127 202 . - . ID=gene-C9E95_RS19555;Name=C9E95_RS19555;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS19555;old_locus_tag=C9E95_20035 NZ_PYJW01000166.1 tRNAscan-SE tRNA 127 202 . - . ID=rna-C9E95_RS19555;Parent=gene-C9E95_RS19555;anticodon=(pos:complement(166..168));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS19555;product=tRNA-Glu NZ_PYJW01000166.1 tRNAscan-SE exon 127 202 . - . ID=exon-C9E95_RS19555-1;Parent=rna-C9E95_RS19555;anticodon=(pos:complement(166..168));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS19555;product=tRNA-Glu ##sequence-region NZ_PYJW01000038.1 1 995 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000038.1 RefSeq region 1 995 . + . ID=NZ_PYJW01000038.1:1..995;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000038.1 RefSeq gene 348 920 . - . ID=gene-C9E95_RS02820;Name=hin;gbkey=Gene;gene=hin;gene_biotype=protein_coding;locus_tag=C9E95_RS02820;old_locus_tag=C9E95_02865 NZ_PYJW01000038.1 Protein Homology CDS 348 920 . - 0 ID=cds-WP_000190912.1;Parent=gene-C9E95_RS02820;Dbxref=GenBank:WP_000190912.1;Name=WP_000190912.1;gbkey=CDS;gene=hin;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461699.1;locus_tag=C9E95_RS02820;product=flagellar phase variation DNA invertase Hin;protein_id=WP_000190912.1;transl_table=11 ##sequence-region NZ_PYJW01000189.1 1 989 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000189.1 RefSeq region 1 989 . + . ID=NZ_PYJW01000189.1:1..989;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000189.1 RefSeq gene 1 989 . - . ID=gene-C9E95_RS22190;Name=tuf;end_range=989,.;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=C9E95_RS22190;old_locus_tag=C9E95_22740;partial=true;start_range=.,1 NZ_PYJW01000189.1 Protein Homology CDS 1 989 . - 0 ID=cds-WP_001682180.1;Parent=gene-C9E95_RS22190;Dbxref=GenBank:WP_001682180.1;Name=WP_001682180.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;end_range=989,.;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=C9E95_RS22190;partial=true;product=elongation factor Tu;protein_id=WP_001682180.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJW01000082.1 1 58350 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000082.1 RefSeq region 1 58350 . + . ID=NZ_PYJW01000082.1:1..58350;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000082.1 RefSeq gene 84 644 . + . ID=gene-C9E95_RS08455;Name=stfA;gbkey=Gene;gene=stfA;gene_biotype=protein_coding;locus_tag=C9E95_RS08455;old_locus_tag=C9E95_08655 NZ_PYJW01000082.1 Protein Homology CDS 84 644 . + 0 ID=cds-WP_001090553.1;Parent=gene-C9E95_RS08455;Dbxref=GenBank:WP_001090553.1;Name=WP_001090553.1;gbkey=CDS;gene=stfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459200.1;locus_tag=C9E95_RS08455;product=fimbrial major subunit StfA;protein_id=WP_001090553.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 730 3387 . + . ID=gene-C9E95_RS08460;Name=C9E95_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08460;old_locus_tag=C9E95_08660 NZ_PYJW01000082.1 Protein Homology CDS 730 3387 . + 0 ID=cds-WP_080203741.1;Parent=gene-C9E95_RS08460;Dbxref=GenBank:WP_080203741.1;Name=WP_080203741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459201.1;locus_tag=C9E95_RS08460;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_080203741.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 3405 4157 . + . ID=gene-C9E95_RS08465;Name=stfD;gbkey=Gene;gene=stfD;gene_biotype=protein_coding;locus_tag=C9E95_RS08465;old_locus_tag=C9E95_08665 NZ_PYJW01000082.1 Protein Homology CDS 3405 4157 . + 0 ID=cds-WP_000982726.1;Parent=gene-C9E95_RS08465;Dbxref=GenBank:WP_000982726.1;Name=WP_000982726.1;gbkey=CDS;gene=stfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459202.1;locus_tag=C9E95_RS08465;product=fimbrial chaperone StfD;protein_id=WP_000982726.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 4176 4688 . + . ID=gene-C9E95_RS08470;Name=C9E95_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08470;old_locus_tag=C9E95_08670 NZ_PYJW01000082.1 Protein Homology CDS 4176 4688 . + 0 ID=cds-WP_001250313.1;Parent=gene-C9E95_RS08470;Dbxref=GenBank:WP_001250313.1;Name=WP_001250313.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459203.1;locus_tag=C9E95_RS08470;product=fimbrial protein;protein_id=WP_001250313.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 4685 5161 . + . ID=gene-C9E95_RS08475;Name=stfF;gbkey=Gene;gene=stfF;gene_biotype=protein_coding;locus_tag=C9E95_RS08475;old_locus_tag=C9E95_08675 NZ_PYJW01000082.1 Protein Homology CDS 4685 5161 . + 0 ID=cds-WP_023244813.1;Parent=gene-C9E95_RS08475;Dbxref=GenBank:WP_023244813.1;Name=WP_023244813.1;gbkey=CDS;gene=stfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459204.1;locus_tag=C9E95_RS08475;product=fimbrial minor subunit StfF;protein_id=WP_023244813.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 5161 5691 . + . ID=gene-C9E95_RS08480;Name=C9E95_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08480;old_locus_tag=C9E95_08680 NZ_PYJW01000082.1 Protein Homology CDS 5161 5691 . + 0 ID=cds-WP_080203740.1;Parent=gene-C9E95_RS08480;Dbxref=GenBank:WP_080203740.1;Name=WP_080203740.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459205.1;locus_tag=C9E95_RS08480;product=fimbrial protein;protein_id=WP_080203740.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 5691 6530 . + . ID=gene-C9E95_RS08485;Name=stfH;gbkey=Gene;gene=stfH;gene_biotype=protein_coding;locus_tag=C9E95_RS08485;old_locus_tag=C9E95_08685 NZ_PYJW01000082.1 Protein Homology CDS 5691 6530 . + 0 ID=cds-WP_001669135.1;Parent=gene-C9E95_RS08485;Dbxref=GenBank:WP_001669135.1;Name=WP_001669135.1;gbkey=CDS;gene=stfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459206.1;locus_tag=C9E95_RS08485;product=fimbrial adhesin StfH;protein_id=WP_001669135.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 6638 7918 . - . ID=gene-C9E95_RS08490;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=C9E95_RS08490;old_locus_tag=C9E95_08690 NZ_PYJW01000082.1 Protein Homology CDS 6638 7918 . - 0 ID=cds-WP_000045248.1;Parent=gene-C9E95_RS08490;Dbxref=GenBank:WP_000045248.1;Name=WP_000045248.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=C9E95_RS08490;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_000045248.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 8088 9509 . + . ID=gene-C9E95_RS08495;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=C9E95_RS08495;old_locus_tag=C9E95_08695 NZ_PYJW01000082.1 Protein Homology CDS 8088 9509 . + 0 ID=cds-WP_000845426.1;Parent=gene-C9E95_RS08495;Dbxref=GenBank:WP_000845426.1;Name=WP_000845426.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459208.1;locus_tag=C9E95_RS08495;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_000845426.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 9591 9935 . + . ID=gene-C9E95_RS08500;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=C9E95_RS08500;old_locus_tag=C9E95_08700 NZ_PYJW01000082.1 Protein Homology CDS 9591 9935 . + 0 ID=cds-WP_001278668.1;Parent=gene-C9E95_RS08500;Dbxref=GenBank:WP_001278668.1;Name=WP_001278668.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=C9E95_RS08500;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001278668.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 10036 10659 . - . ID=gene-C9E95_RS08505;Name=C9E95_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08505;old_locus_tag=C9E95_08705 NZ_PYJW01000082.1 Protein Homology CDS 10036 10659 . - 0 ID=cds-WP_000964234.1;Parent=gene-C9E95_RS08505;Dbxref=GenBank:WP_000964234.1;Name=WP_000964234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459210.1;locus_tag=C9E95_RS08505;product=TRIC cation channel family protein;protein_id=WP_000964234.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 10696 11496 . - . ID=gene-C9E95_RS08510;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=C9E95_RS08510;old_locus_tag=C9E95_08710 NZ_PYJW01000082.1 Protein Homology CDS 10696 11496 . - 0 ID=cds-WP_001118838.1;Parent=gene-C9E95_RS08510;Dbxref=GenBank:WP_001118838.1;Name=WP_001118838.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459211.1;locus_tag=C9E95_RS08510;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_001118838.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 11489 12187 . - . ID=gene-C9E95_RS08515;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=C9E95_RS08515;old_locus_tag=C9E95_08715 NZ_PYJW01000082.1 Protein Homology CDS 11489 12187 . - 0 ID=cds-WP_080203739.1;Parent=gene-C9E95_RS08515;Dbxref=GenBank:WP_080203739.1;Name=WP_080203739.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459212.1;locus_tag=C9E95_RS08515;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_080203739.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 12272 13789 . + . ID=gene-C9E95_RS08520;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=C9E95_RS08520;old_locus_tag=C9E95_08720 NZ_PYJW01000082.1 Protein Homology CDS 12272 13789 . + 0 ID=cds-WP_000146450.1;Parent=gene-C9E95_RS08520;Dbxref=GenBank:WP_000146450.1;Name=WP_000146450.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459213.1;locus_tag=C9E95_RS08520;product=dGTPase;protein_id=WP_000146450.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 13919 15346 . + . ID=gene-C9E95_RS08525;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=C9E95_RS08525;old_locus_tag=C9E95_08725 NZ_PYJW01000082.1 Protein Homology CDS 13919 15346 . + 0 ID=cds-WP_000753958.1;Parent=gene-C9E95_RS08525;Dbxref=GenBank:WP_000753958.1;Name=WP_000753958.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=C9E95_RS08525;product=serine endoprotease DegP;protein_id=WP_000753958.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 15499 16656 . + . ID=gene-C9E95_RS08530;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=C9E95_RS08530;old_locus_tag=C9E95_08730 NZ_PYJW01000082.1 Protein Homology CDS 15499 16656 . + 0 ID=cds-WP_000929420.1;Parent=gene-C9E95_RS08530;Dbxref=GenBank:WP_000929420.1;Name=WP_000929420.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=C9E95_RS08530;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_000929420.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 16744 17130 . - . ID=gene-C9E95_RS08535;Name=C9E95_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08535;old_locus_tag=C9E95_08735 NZ_PYJW01000082.1 Protein Homology CDS 16744 17130 . - 0 ID=cds-WP_000272193.1;Parent=gene-C9E95_RS08535;Dbxref=GenBank:WP_000272193.1;Name=WP_000272193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=C9E95_RS08535;product=DUF3461 family protein;protein_id=WP_000272193.1;transl_table=11 NZ_PYJW01000082.1 RefSeq pseudogene 17377 18677 . + . ID=gene-C9E95_RS08540;Name=C9E95_RS08540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS08540;old_locus_tag=C9E95_08740;pseudo=true NZ_PYJW01000082.1 Protein Homology CDS 17377 18677 . + 0 ID=cds-C9E95_RS08540;Parent=gene-C9E95_RS08540;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=C9E95_RS08540;product=MFS transporter;pseudo=true;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 18714 19538 . - . ID=gene-C9E95_RS08545;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=C9E95_RS08545;old_locus_tag=C9E95_08745 NZ_PYJW01000082.1 Protein Homology CDS 18714 19538 . - 0 ID=cds-WP_001186673.1;Parent=gene-C9E95_RS08545;Dbxref=GenBank:WP_001186673.1;Name=WP_001186673.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=C9E95_RS08545;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186673.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 19568 22240 . - . ID=gene-C9E95_RS08550;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=C9E95_RS08550;old_locus_tag=C9E95_08750 NZ_PYJW01000082.1 Protein Homology CDS 19568 22240 . - 0 ID=cds-WP_001094523.1;Parent=gene-C9E95_RS08550;Dbxref=GenBank:WP_001094523.1;Name=WP_001094523.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459219.1;locus_tag=C9E95_RS08550;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_001094523.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 22478 23272 . - . ID=gene-C9E95_RS08555;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=C9E95_RS08555;old_locus_tag=C9E95_08760 NZ_PYJW01000082.1 Protein Homology CDS 22478 23272 . - 0 ID=cds-WP_001018214.1;Parent=gene-C9E95_RS08555;Dbxref=GenBank:WP_001018214.1;Name=WP_001018214.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459220.1;locus_tag=C9E95_RS08555;product=type I methionyl aminopeptidase;protein_id=WP_001018214.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 23723 24448 . + . ID=gene-C9E95_RS08560;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=C9E95_RS08560;old_locus_tag=C9E95_08765 NZ_PYJW01000082.1 Protein Homology CDS 23723 24448 . + 0 ID=cds-WP_000246886.1;Parent=gene-C9E95_RS08560;Dbxref=GenBank:WP_000246886.1;Name=WP_000246886.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=C9E95_RS08560;product=30S ribosomal protein S2;protein_id=WP_000246886.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 24706 25557 . + . ID=gene-C9E95_RS08565;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=C9E95_RS08565;old_locus_tag=C9E95_08775 NZ_PYJW01000082.1 Protein Homology CDS 24706 25557 . + 0 ID=cds-WP_000808106.1;Parent=gene-C9E95_RS08565;Dbxref=GenBank:WP_000808106.1;Name=WP_000808106.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=C9E95_RS08565;product=translation elongation factor Ts;protein_id=WP_000808106.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 25702 26427 . + . ID=gene-C9E95_RS08570;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=C9E95_RS08570;old_locus_tag=C9E95_08780 NZ_PYJW01000082.1 Protein Homology CDS 25702 26427 . + 0 ID=cds-WP_000224567.1;Parent=gene-C9E95_RS08570;Dbxref=GenBank:WP_000224567.1;Name=WP_000224567.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=C9E95_RS08570;product=UMP kinase;protein_id=WP_000224567.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 26574 27131 . + . ID=gene-C9E95_RS08575;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=C9E95_RS08575;old_locus_tag=C9E95_08785 NZ_PYJW01000082.1 Protein Homology CDS 26574 27131 . + 0 ID=cds-WP_000622423.1;Parent=gene-C9E95_RS08575;Dbxref=GenBank:WP_000622423.1;Name=WP_000622423.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=C9E95_RS08575;product=ribosome recycling factor;protein_id=WP_000622423.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 27273 28469 . + . ID=gene-C9E95_RS08580;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=C9E95_RS08580;old_locus_tag=C9E95_08790 NZ_PYJW01000082.1 Protein Homology CDS 27273 28469 . + 0 ID=cds-WP_080203738.1;Parent=gene-C9E95_RS08580;Dbxref=GenBank:WP_080203738.1;Name=WP_080203738.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459225.1;locus_tag=C9E95_RS08580;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_080203738.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 28782 29540 . + . ID=gene-C9E95_RS08585;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=C9E95_RS08585;old_locus_tag=C9E95_08800 NZ_PYJW01000082.1 Protein Homology CDS 28782 29540 . + 0 ID=cds-WP_000947413.1;Parent=gene-C9E95_RS08585;Dbxref=GenBank:WP_000947413.1;Name=WP_000947413.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459226.1;locus_tag=C9E95_RS08585;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_000947413.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 29553 30410 . + . ID=gene-C9E95_RS08590;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=C9E95_RS08590;old_locus_tag=C9E95_08805 NZ_PYJW01000082.1 Protein Homology CDS 29553 30410 . + 0 ID=cds-WP_000922422.1;Parent=gene-C9E95_RS08590;Dbxref=GenBank:WP_000922422.1;Name=WP_000922422.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459227.1;locus_tag=C9E95_RS08590;product=phosphatidate cytidylyltransferase;protein_id=WP_000922422.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 30422 31774 . + . ID=gene-C9E95_RS08595;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=C9E95_RS08595;old_locus_tag=C9E95_08810 NZ_PYJW01000082.1 Protein Homology CDS 30422 31774 . + 0 ID=cds-WP_000949017.1;Parent=gene-C9E95_RS08595;Dbxref=GenBank:WP_000949017.1;Name=WP_000949017.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=C9E95_RS08595;product=sigma E protease regulator RseP;protein_id=WP_000949017.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 31806 34217 . + . ID=gene-C9E95_RS08600;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=C9E95_RS08600;old_locus_tag=C9E95_08815 NZ_PYJW01000082.1 Protein Homology CDS 31806 34217 . + 0 ID=cds-WP_001240923.1;Parent=gene-C9E95_RS08600;Dbxref=GenBank:WP_001240923.1;Name=WP_001240923.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459229.1;locus_tag=C9E95_RS08600;product=outer membrane protein assembly factor BamA;protein_id=WP_001240923.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 34341 34826 . + . ID=gene-C9E95_RS08605;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=C9E95_RS08605;old_locus_tag=C9E95_08820 NZ_PYJW01000082.1 Protein Homology CDS 34341 34826 . + 0 ID=cds-WP_000758966.1;Parent=gene-C9E95_RS08605;Dbxref=GenBank:WP_000758966.1;Name=WP_000758966.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459230.1;locus_tag=C9E95_RS08605;product=molecular chaperone Skp;protein_id=WP_000758966.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 34830 35855 . + . ID=gene-C9E95_RS08610;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=C9E95_RS08610;old_locus_tag=C9E95_08825 NZ_PYJW01000082.1 Protein Homology CDS 34830 35855 . + 0 ID=cds-WP_001139265.1;Parent=gene-C9E95_RS08610;Dbxref=GenBank:WP_001139265.1;Name=WP_001139265.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=C9E95_RS08610;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_001139265.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 35961 36416 . + . ID=gene-C9E95_RS08615;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=C9E95_RS08615;old_locus_tag=C9E95_08830 NZ_PYJW01000082.1 Protein Homology CDS 35961 36416 . + 0 ID=cds-WP_000210741.1;Parent=gene-C9E95_RS08615;Dbxref=GenBank:WP_000210741.1;Name=WP_000210741.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=C9E95_RS08615;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000210741.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 36420 37208 . + . ID=gene-C9E95_RS08620;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=C9E95_RS08620;old_locus_tag=C9E95_08835 NZ_PYJW01000082.1 Protein Homology CDS 36420 37208 . + 0 ID=cds-WP_000565949.1;Parent=gene-C9E95_RS08620;Dbxref=GenBank:WP_000565949.1;Name=WP_000565949.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=C9E95_RS08620;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_000565949.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 37208 38356 . + . ID=gene-C9E95_RS08625;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=C9E95_RS08625;old_locus_tag=C9E95_08840 NZ_PYJW01000082.1 Protein Homology CDS 37208 38356 . + 0 ID=cds-WP_000741216.1;Parent=gene-C9E95_RS08625;Dbxref=GenBank:WP_000741216.1;Name=WP_000741216.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459234.1;locus_tag=C9E95_RS08625;product=lipid-A-disaccharide synthase;protein_id=WP_000741216.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 38353 38949 . + . ID=gene-C9E95_RS08630;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=C9E95_RS08630;old_locus_tag=C9E95_08845 NZ_PYJW01000082.1 Protein Homology CDS 38353 38949 . + 0 ID=cds-WP_000569412.1;Parent=gene-C9E95_RS08630;Dbxref=GenBank:WP_000569412.1;Name=WP_000569412.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459235.1;locus_tag=C9E95_RS08630;product=ribonuclease HII;protein_id=WP_000569412.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 38973 42455 . + . ID=gene-C9E95_RS08635;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=C9E95_RS08635;old_locus_tag=C9E95_08850 NZ_PYJW01000082.1 Protein Homology CDS 38973 42455 . + 0 ID=cds-WP_080203737.1;Parent=gene-C9E95_RS08635;Dbxref=GenBank:WP_080203737.1;Name=WP_080203737.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459236.1;locus_tag=C9E95_RS08635;product=DNA polymerase III subunit alpha;protein_id=WP_080203737.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 42468 43427 . + . ID=gene-C9E95_RS08640;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=C9E95_RS08640;old_locus_tag=C9E95_08855 NZ_PYJW01000082.1 Protein Homology CDS 42468 43427 . + 0 ID=cds-WP_000055753.1;Parent=gene-C9E95_RS08640;Dbxref=GenBank:WP_000055753.1;Name=WP_000055753.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=C9E95_RS08640;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_000055753.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 43607 45370 . + . ID=gene-C9E95_RS08645;Name=C9E95_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08645;old_locus_tag=C9E95_08860 NZ_PYJW01000082.1 Protein Homology CDS 43607 45370 . + 0 ID=cds-WP_000524169.1;Parent=gene-C9E95_RS08645;Dbxref=GenBank:WP_000524169.1;Name=WP_000524169.1;Ontology_term=GO:0006032,GO:0016998,GO:0004568;gbkey=CDS;go_function=chitinase activity|0004568||IEA;go_process=chitin catabolic process|0006032||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459238.1;locus_tag=C9E95_RS08645;product=chitinase;protein_id=WP_000524169.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 45446 47587 . + . ID=gene-C9E95_RS08650;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=C9E95_RS08650;old_locus_tag=C9E95_08865 NZ_PYJW01000082.1 Protein Homology CDS 45446 47587 . + 0 ID=cds-WP_001021055.1;Parent=gene-C9E95_RS08650;Dbxref=GenBank:WP_001021055.1;Name=WP_001021055.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459239.1;locus_tag=C9E95_RS08650;product=lysine decarboxylase LdcC;protein_id=WP_001021055.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 47643 48032 . + . ID=gene-C9E95_RS08655;Name=C9E95_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08655;old_locus_tag=C9E95_08870 NZ_PYJW01000082.1 Protein Homology CDS 47643 48032 . + 0 ID=cds-WP_000901086.1;Parent=gene-C9E95_RS08655;Dbxref=GenBank:WP_000901086.1;Name=WP_000901086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459240.1;locus_tag=C9E95_RS08655;product=VOC family protein;protein_id=WP_000901086.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 48095 49387 . + . ID=gene-C9E95_RS08660;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=C9E95_RS08660;old_locus_tag=C9E95_08875 NZ_PYJW01000082.1 Protein Homology CDS 48095 49387 . + 0 ID=cds-WP_080203736.1;Parent=gene-C9E95_RS08660;Dbxref=GenBank:WP_080203736.1;Name=WP_080203736.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459241.1;locus_tag=C9E95_RS08660;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_080203736.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 49471 49731 . - . ID=gene-C9E95_RS08665;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=C9E95_RS08665;old_locus_tag=C9E95_08880 NZ_PYJW01000082.1 Protein Homology CDS 49471 49731 . - 0 ID=cds-WP_000062330.1;Parent=gene-C9E95_RS08665;Dbxref=GenBank:WP_000062330.1;Name=WP_000062330.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459242.1;locus_tag=C9E95_RS08665;product=Rho-binding antiterminator;protein_id=WP_000062330.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 49718 49918 . - . ID=gene-C9E95_RS08670;Name=C9E95_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08670;old_locus_tag=C9E95_08885 NZ_PYJW01000082.1 Protein Homology CDS 49718 49918 . - 0 ID=cds-WP_001518678.1;Parent=gene-C9E95_RS08670;Dbxref=GenBank:WP_001518678.1;Name=WP_001518678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=C9E95_RS08670;product=YaeP family protein;protein_id=WP_001518678.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 50116 50661 . + . ID=gene-C9E95_RS08675;Name=C9E95_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08675;old_locus_tag=C9E95_08890 NZ_PYJW01000082.1 Protein Homology CDS 50116 50661 . + 0 ID=cds-WP_001185319.1;Parent=gene-C9E95_RS08675;Dbxref=GenBank:WP_001185319.1;Name=WP_001185319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459244.1;locus_tag=C9E95_RS08675;product=YaeQ family protein;protein_id=WP_001185319.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 50658 51080 . + . ID=gene-C9E95_RS08680;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=C9E95_RS08680;old_locus_tag=C9E95_08895 NZ_PYJW01000082.1 Protein Homology CDS 50658 51080 . + 0 ID=cds-WP_000560523.1;Parent=gene-C9E95_RS08680;Dbxref=GenBank:WP_000560523.1;Name=WP_000560523.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459245.1;locus_tag=C9E95_RS08680;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_000560523.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 51112 51813 . + . ID=gene-C9E95_RS08685;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=C9E95_RS08685;old_locus_tag=C9E95_08900 NZ_PYJW01000082.1 Protein Homology CDS 51112 51813 . + 0 ID=cds-WP_000252580.1;Parent=gene-C9E95_RS08685;Dbxref=GenBank:WP_000252580.1;Name=WP_000252580.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006899150.1;locus_tag=C9E95_RS08685;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_000252580.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 51887 53605 . - . ID=gene-C9E95_RS08690;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=C9E95_RS08690;old_locus_tag=C9E95_08905 NZ_PYJW01000082.1 Protein Homology CDS 51887 53605 . - 0 ID=cds-WP_001260683.1;Parent=gene-C9E95_RS08690;Dbxref=GenBank:WP_001260683.1;Name=WP_001260683.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=C9E95_RS08690;product=proline--tRNA ligase;protein_id=WP_001260683.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 53716 54423 . - . ID=gene-C9E95_RS08695;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=C9E95_RS08695;old_locus_tag=C9E95_08910 NZ_PYJW01000082.1 Protein Homology CDS 53716 54423 . - 0 ID=cds-WP_000093988.1;Parent=gene-C9E95_RS08695;Dbxref=GenBank:WP_000093988.1;Name=WP_000093988.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459247.1;locus_tag=C9E95_RS08695;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_000093988.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 54420 54824 . - . ID=gene-C9E95_RS08700;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=C9E95_RS08700;old_locus_tag=C9E95_08915 NZ_PYJW01000082.1 Protein Homology CDS 54420 54824 . - 0 ID=cds-WP_001202315.1;Parent=gene-C9E95_RS08700;Dbxref=GenBank:WP_001202315.1;Name=WP_001202315.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459248.1;locus_tag=C9E95_RS08700;product=Rcs stress response system protein RcsF;protein_id=WP_001202315.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 54943 55758 . - . ID=gene-C9E95_RS08705;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=C9E95_RS08705;old_locus_tag=C9E95_08920 NZ_PYJW01000082.1 Protein Homology CDS 54943 55758 . - 0 ID=cds-WP_000874215.1;Parent=gene-C9E95_RS08705;Dbxref=GenBank:WP_000874215.1;Name=WP_000874215.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459249.1;locus_tag=C9E95_RS08705;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_000874215.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 55797 56450 . - . ID=gene-C9E95_RS08710;Name=C9E95_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08710;old_locus_tag=C9E95_08925 NZ_PYJW01000082.1 Protein Homology CDS 55797 56450 . - 0 ID=cds-WP_001287486.1;Parent=gene-C9E95_RS08710;Dbxref=GenBank:WP_001287486.1;Name=WP_001287486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=C9E95_RS08710;product=methionine ABC transporter permease MetI;protein_id=WP_001287486.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 56443 57474 . - . ID=gene-C9E95_RS08715;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=C9E95_RS08715;old_locus_tag=C9E95_08930 NZ_PYJW01000082.1 Protein Homology CDS 56443 57474 . - 0 ID=cds-WP_000594015.1;Parent=gene-C9E95_RS08715;Dbxref=GenBank:WP_000594015.1;Name=WP_000594015.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=C9E95_RS08715;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_000594015.1;transl_table=11 NZ_PYJW01000082.1 RefSeq gene 57664 58230 . + . ID=gene-C9E95_RS08720;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=C9E95_RS08720;old_locus_tag=C9E95_08935 NZ_PYJW01000082.1 Protein Homology CDS 57664 58230 . + 0 ID=cds-WP_023993926.1;Parent=gene-C9E95_RS08720;Dbxref=GenBank:WP_023993926.1;Name=WP_023993926.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459252.1;locus_tag=C9E95_RS08720;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_023993926.1;transl_table=11 ##sequence-region NZ_PYJW01000157.1 1 971 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000157.1 RefSeq region 1 971 . + . ID=NZ_PYJW01000157.1:1..971;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000157.1 RefSeq gene 193 971 . - . ID=gene-C9E95_RS18320;Name=C9E95_RS18320;end_range=971,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18320;old_locus_tag=C9E95_18775;partial=true NZ_PYJW01000157.1 Protein Homology CDS 193 971 . - 2 ID=cds-WP_061694155.1;Parent=gene-C9E95_RS18320;Dbxref=GenBank:WP_061694155.1;Name=WP_061694155.1;Ontology_term=GO:0016757;end_range=971,.;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536394.1;locus_tag=C9E95_RS18320;partial=true;product=glycosyltransferase;protein_id=WP_061694155.1;transl_table=11 ##sequence-region NZ_PYJW01000147.1 1 946 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000147.1 RefSeq region 1 946 . + . ID=NZ_PYJW01000147.1:1..946;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000147.1 RefSeq gene 133 333 . + . ID=gene-C9E95_RS17975;Name=pagK;gbkey=Gene;gene=pagK;gene_biotype=protein_coding;gene_synonym=pagK1;locus_tag=C9E95_RS17975;old_locus_tag=C9E95_18420 NZ_PYJW01000147.1 Protein Homology CDS 133 333 . + 0 ID=cds-WP_010989029.1;Parent=gene-C9E95_RS17975;Dbxref=GenBank:WP_010989029.1;Name=WP_010989029.1;gbkey=CDS;gene=pagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460822.1;locus_tag=C9E95_RS17975;product=vesicle-borne virulence factor PagK;protein_id=WP_010989029.1;transl_table=11 NZ_PYJW01000147.1 RefSeq gene 430 946 . - . ID=gene-C9E95_RS17980;Name=C9E95_RS17980;end_range=946,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17980;old_locus_tag=C9E95_18425;partial=true NZ_PYJW01000147.1 Protein Homology CDS 430 946 . - 1 ID=cds-WP_217810251.1;Parent=gene-C9E95_RS17980;Dbxref=GenBank:WP_217810251.1;Name=WP_217810251.1;Ontology_term=GO:0098004;end_range=946,.;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461522.1;locus_tag=C9E95_RS17980;partial=true;product=tail fiber assembly protein;protein_id=WP_217810251.1;transl_table=11 ##sequence-region NZ_PYJW01000015.1 1 56413 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000015.1 RefSeq region 1 56413 . + . ID=NZ_PYJW01000015.1:1..56413;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000015.1 RefSeq gene 85 1209 . - . ID=gene-C9E95_RS00840;Name=C9E95_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00840;old_locus_tag=C9E95_00855 NZ_PYJW01000015.1 Protein Homology CDS 85 1209 . - 0 ID=cds-WP_001214757.1;Parent=gene-C9E95_RS00840;Dbxref=GenBank:WP_001214757.1;Name=WP_001214757.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=C9E95_RS00840;product=ABC transporter permease;protein_id=WP_001214757.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 1209 3950 . - . ID=gene-C9E95_RS00845;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=C9E95_RS00845;old_locus_tag=C9E95_00860 NZ_PYJW01000015.1 Protein Homology CDS 1209 3950 . - 0 ID=cds-WP_000202924.1;Parent=gene-C9E95_RS00845;Dbxref=GenBank:WP_000202924.1;Name=WP_000202924.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709254.1;locus_tag=C9E95_RS00845;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_000202924.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 3947 5014 . - . ID=gene-C9E95_RS00850;Name=C9E95_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00850;old_locus_tag=C9E95_00865 NZ_PYJW01000015.1 Protein Homology CDS 3947 5014 . - 0 ID=cds-WP_000359836.1;Parent=gene-C9E95_RS00850;Dbxref=GenBank:WP_000359836.1;Name=WP_000359836.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462488.1;locus_tag=C9E95_RS00850;product=HlyD family secretion protein;protein_id=WP_000359836.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 5320 6516 . - . ID=gene-C9E95_RS00855;Name=C9E95_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00855;old_locus_tag=C9E95_00870 NZ_PYJW01000015.1 Protein Homology CDS 5320 6516 . - 0 ID=cds-WP_079986600.1;Parent=gene-C9E95_RS00855;Dbxref=GenBank:WP_079986600.1;Name=WP_079986600.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462489.1;locus_tag=C9E95_RS00855;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_079986600.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 6747 8243 . + . ID=gene-C9E95_RS00860;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=C9E95_RS00860;old_locus_tag=C9E95_00875 NZ_PYJW01000015.1 Protein Homology CDS 6747 8243 . + 0 ID=cds-WP_000902764.1;Parent=gene-C9E95_RS00860;Dbxref=GenBank:WP_000902764.1;Name=WP_000902764.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462490.1;locus_tag=C9E95_RS00860;product=inorganic phosphate transporter PitA;protein_id=WP_000902764.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 8383 8718 . - . ID=gene-C9E95_RS00865;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=C9E95_RS00865;old_locus_tag=C9E95_00880 NZ_PYJW01000015.1 Protein Homology CDS 8383 8718 . - 0 ID=cds-WP_000626193.1;Parent=gene-C9E95_RS00865;Dbxref=GenBank:WP_000626193.1;Name=WP_000626193.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462491.1;locus_tag=C9E95_RS00865;product=universal stress protein UspB;protein_id=WP_000626193.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 9106 9540 . + . ID=gene-C9E95_RS00870;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=C9E95_RS00870;old_locus_tag=C9E95_00885 NZ_PYJW01000015.1 Protein Homology CDS 9106 9540 . + 0 ID=cds-WP_000323565.1;Parent=gene-C9E95_RS00870;Dbxref=GenBank:WP_000323565.1;Name=WP_000323565.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462492.1;locus_tag=C9E95_RS00870;product=universal stress protein UspA;protein_id=WP_000323565.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 9865 11337 . + . ID=gene-C9E95_RS00875;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=C9E95_RS00875;old_locus_tag=C9E95_00890 NZ_PYJW01000015.1 Protein Homology CDS 9865 11337 . + 0 ID=cds-WP_001098274.1;Parent=gene-C9E95_RS00875;Dbxref=GenBank:WP_001098274.1;Name=WP_001098274.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462493.1;locus_tag=C9E95_RS00875;product=dipeptide/tripeptide permease DtpB;protein_id=WP_001098274.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 11429 12187 . - . ID=gene-C9E95_RS00880;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=C9E95_RS00880;old_locus_tag=C9E95_00895 NZ_PYJW01000015.1 Protein Homology CDS 11429 12187 . - 0 ID=cds-WP_001165127.1;Parent=gene-C9E95_RS00880;Dbxref=GenBank:WP_001165127.1;Name=WP_001165127.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462494.1;locus_tag=C9E95_RS00880;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_001165127.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 12194 14236 . - . ID=gene-C9E95_RS00885;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=C9E95_RS00885;old_locus_tag=C9E95_00900 NZ_PYJW01000015.1 Protein Homology CDS 12194 14236 . - 0 ID=cds-WP_000184178.1;Parent=gene-C9E95_RS00885;Dbxref=GenBank:WP_000184178.1;Name=WP_000184178.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1;locus_tag=C9E95_RS00885;product=oligopeptidase A;protein_id=WP_000184178.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 14418 15689 . - . ID=gene-C9E95_RS00890;Name=C9E95_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00890;old_locus_tag=C9E95_00905 NZ_PYJW01000015.1 Protein Homology CDS 14418 15689 . - 0 ID=cds-WP_000766151.1;Parent=gene-C9E95_RS00890;Dbxref=GenBank:WP_000766151.1;Name=WP_000766151.1;Ontology_term=GO:0016311,GO:0003993;gbkey=CDS;go_function=acid phosphatase activity|0003993||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462496.1;locus_tag=C9E95_RS00890;product=acid phosphatase;protein_id=WP_000766151.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 15900 16742 . + . ID=gene-C9E95_RS00895;Name=C9E95_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00895;old_locus_tag=C9E95_00910 NZ_PYJW01000015.1 Protein Homology CDS 15900 16742 . + 0 ID=cds-WP_017465323.1;Parent=gene-C9E95_RS00895;Dbxref=GenBank:WP_017465323.1;Name=WP_017465323.1;Ontology_term=GO:0015976,GO:0070475,GO:0003723,GO:0008988,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=carbon utilization|0015976||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462497.1;locus_tag=C9E95_RS00895;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_017465323.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 16847 18199 . + . ID=gene-C9E95_RS00900;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=C9E95_RS00900;old_locus_tag=C9E95_00915 NZ_PYJW01000015.1 Protein Homology CDS 16847 18199 . + 0 ID=cds-WP_000160764.1;Parent=gene-C9E95_RS00900;Dbxref=GenBank:WP_000160764.1;Name=WP_000160764.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=C9E95_RS00900;product=glutathione-disulfide reductase;protein_id=WP_000160764.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 18246 19289 . - . ID=gene-C9E95_RS00905;Name=fraE;gbkey=Gene;gene=fraE;gene_biotype=protein_coding;locus_tag=C9E95_RS00905;old_locus_tag=C9E95_00920 NZ_PYJW01000015.1 Protein Homology CDS 18246 19289 . - 0 ID=cds-WP_000702747.1;Parent=gene-C9E95_RS00905;Dbxref=GenBank:WP_000702747.1;Name=WP_000702747.1;gbkey=CDS;gene=fraE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=C9E95_RS00905;product=fructose-asparagine asparaginase;protein_id=WP_000702747.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 19348 20667 . - . ID=gene-C9E95_RS00910;Name=C9E95_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00910;old_locus_tag=C9E95_00925 NZ_PYJW01000015.1 Protein Homology CDS 19348 20667 . - 0 ID=cds-WP_000498935.1;Parent=gene-C9E95_RS00910;Dbxref=GenBank:WP_000498935.1;Name=WP_000498935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=C9E95_RS00910;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=WP_000498935.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 20721 21566 . - . ID=gene-C9E95_RS00915;Name=fraD;gbkey=Gene;gene=fraD;gene_biotype=protein_coding;locus_tag=C9E95_RS00915;old_locus_tag=C9E95_00930 NZ_PYJW01000015.1 Protein Homology CDS 20721 21566 . - 0 ID=cds-WP_023250589.1;Parent=gene-C9E95_RS00915;Dbxref=GenBank:WP_023250589.1;Name=WP_023250589.1;gbkey=CDS;gene=fraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462501.1;locus_tag=C9E95_RS00915;product=fructose-aspartate kinase;protein_id=WP_023250589.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 21630 22607 . - . ID=gene-C9E95_RS00920;Name=fraB;gbkey=Gene;gene=fraB;gene_biotype=protein_coding;locus_tag=C9E95_RS00920;old_locus_tag=C9E95_00935 NZ_PYJW01000015.1 Protein Homology CDS 21630 22607 . - 0 ID=cds-WP_077906047.1;Parent=gene-C9E95_RS00920;Dbxref=GenBank:WP_077906047.1;Name=WP_077906047.1;gbkey=CDS;gene=fraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462502.1;locus_tag=C9E95_RS00920;product=6-phosphofructose-aspartate deglycase;protein_id=WP_077906047.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 22783 23502 . - . ID=gene-C9E95_RS00925;Name=C9E95_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00925;old_locus_tag=C9E95_00940 NZ_PYJW01000015.1 Protein Homology CDS 22783 23502 . - 0 ID=cds-WP_000572569.1;Parent=gene-C9E95_RS00925;Dbxref=GenBank:WP_000572569.1;Name=WP_000572569.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462503.1;locus_tag=C9E95_RS00925;product=GntR family transcriptional regulator;protein_id=WP_000572569.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 23829 25478 . + . ID=gene-C9E95_RS00930;Name=C9E95_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00930;old_locus_tag=C9E95_00945 NZ_PYJW01000015.1 Protein Homology CDS 23829 25478 . + 0 ID=cds-WP_000934257.1;Parent=gene-C9E95_RS00930;Dbxref=GenBank:WP_000934257.1;Name=WP_000934257.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462504.1;locus_tag=C9E95_RS00930;product=alpha%2Calpha-trehalase;protein_id=WP_000934257.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 25491 27080 . - . ID=gene-C9E95_RS00935;Name=C9E95_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00935;old_locus_tag=C9E95_00950 NZ_PYJW01000015.1 Protein Homology CDS 25491 27080 . - 0 ID=cds-WP_079788028.1;Parent=gene-C9E95_RS00935;Dbxref=GenBank:WP_079788028.1;Name=WP_079788028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=C9E95_RS00935;product=STY4199 family HEPN domain-containing protein;protein_id=WP_079788028.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 27361 27717 . + . ID=gene-C9E95_RS00940;Name=C9E95_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00940;old_locus_tag=C9E95_00955 NZ_PYJW01000015.1 Protein Homology CDS 27361 27717 . + 0 ID=cds-WP_001120252.1;Parent=gene-C9E95_RS00940;Dbxref=GenBank:WP_001120252.1;Name=WP_001120252.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462506.1;locus_tag=C9E95_RS00940;product=glycoside hydrolase family protein;protein_id=WP_001120252.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 27723 28325 . - . ID=gene-C9E95_RS00945;Name=C9E95_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00945;old_locus_tag=C9E95_00960 NZ_PYJW01000015.1 Protein Homology CDS 27723 28325 . - 0 ID=cds-WP_001196084.1;Parent=gene-C9E95_RS00945;Dbxref=GenBank:WP_001196084.1;Name=WP_001196084.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462507.1;locus_tag=C9E95_RS00945;product=helix-turn-helix transcriptional regulator;protein_id=WP_001196084.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 28956 29855 . + . ID=gene-C9E95_RS00950;Name=C9E95_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00950;old_locus_tag=C9E95_00965 NZ_PYJW01000015.1 Protein Homology CDS 28956 29855 . + 0 ID=cds-WP_000358050.1;Parent=gene-C9E95_RS00950;Dbxref=GenBank:WP_000358050.1;Name=WP_000358050.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462508.1;locus_tag=C9E95_RS00950;product=LysR family transcriptional regulator;protein_id=WP_000358050.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 29928 30956 . + . ID=gene-C9E95_RS00955;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=C9E95_RS00955;old_locus_tag=C9E95_00970 NZ_PYJW01000015.1 Protein Homology CDS 29928 30956 . + 0 ID=cds-WP_000159626.1;Parent=gene-C9E95_RS00955;Dbxref=GenBank:WP_000159626.1;Name=WP_000159626.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462509.1;locus_tag=C9E95_RS00955;product=inner membrane protein YhjD;protein_id=WP_000159626.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 31307 32629 . + . ID=gene-C9E95_RS00960;Name=C9E95_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00960;old_locus_tag=C9E95_00975 NZ_PYJW01000015.1 Protein Homology CDS 31307 32629 . + 0 ID=cds-WP_001748884.1;Parent=gene-C9E95_RS00960;Dbxref=GenBank:WP_001748884.1;Name=WP_001748884.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462510.1;locus_tag=C9E95_RS00960;product=MFS transporter;protein_id=WP_001748884.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 32669 34729 . - . ID=gene-C9E95_RS00965;Name=C9E95_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00965;old_locus_tag=C9E95_00980 NZ_PYJW01000015.1 Protein Homology CDS 32669 34729 . - 0 ID=cds-WP_061378567.1;Parent=gene-C9E95_RS00965;Dbxref=GenBank:WP_061378567.1;Name=WP_061378567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=C9E95_RS00965;product=AsmA family protein;protein_id=WP_061378567.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 34839 35606 . - . ID=gene-C9E95_RS00970;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=C9E95_RS00970;old_locus_tag=C9E95_00985 NZ_PYJW01000015.1 Protein Homology CDS 34839 35606 . - 0 ID=cds-WP_000595626.1;Parent=gene-C9E95_RS00970;Dbxref=GenBank:WP_000595626.1;Name=WP_000595626.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462512.1;locus_tag=C9E95_RS00970;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_000595626.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 35835 36764 . + . ID=gene-C9E95_RS00975;Name=C9E95_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00975;old_locus_tag=C9E95_00990 NZ_PYJW01000015.1 Protein Homology CDS 35835 36764 . + 0 ID=cds-WP_000037574.1;Parent=gene-C9E95_RS00975;Dbxref=GenBank:WP_000037574.1;Name=WP_000037574.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462513.1;locus_tag=C9E95_RS00975;product=sugar kinase;protein_id=WP_000037574.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 36818 38305 . - . ID=gene-C9E95_RS00980;Name=C9E95_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00980;old_locus_tag=C9E95_00995 NZ_PYJW01000015.1 Protein Homology CDS 36818 38305 . - 0 ID=cds-WP_001163182.1;Parent=gene-C9E95_RS00980;Dbxref=GenBank:WP_001163182.1;Name=WP_001163182.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462514.1;locus_tag=C9E95_RS00980;product=M16 family metallopeptidase;protein_id=WP_001163182.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 38525 39811 . - . ID=gene-C9E95_RS00985;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=C9E95_RS00985;old_locus_tag=C9E95_01000 NZ_PYJW01000015.1 Protein Homology CDS 38525 39811 . - 0 ID=cds-WP_000858228.1;Parent=gene-C9E95_RS00985;Dbxref=GenBank:WP_000858228.1;Name=WP_000858228.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462515.1;locus_tag=C9E95_RS00985;product=C4-dicarboxylate transporter DctC;protein_id=WP_000858228.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 39969 41975 . - . ID=gene-C9E95_RS00990;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=C9E95_RS00990;old_locus_tag=C9E95_01005 NZ_PYJW01000015.1 Protein Homology CDS 39969 41975 . - 0 ID=cds-WP_001266357.1;Parent=gene-C9E95_RS00990;Dbxref=GenBank:WP_001266357.1;Name=WP_001266357.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266355.1;locus_tag=C9E95_RS00990;product=biofilm formation regulator HmsP;protein_id=WP_001266357.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 42149 45691 . - . ID=gene-C9E95_RS01000;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=C9E95_RS01000;old_locus_tag=C9E95_01015 NZ_PYJW01000015.1 Protein Homology CDS 42149 45691 . - 0 ID=cds-WP_080170011.1;Parent=gene-C9E95_RS01000;Dbxref=GenBank:WP_080170011.1;Name=WP_080170011.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=C9E95_RS01000;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_080170011.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 45673 46782 . - . ID=gene-C9E95_RS01005;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=C9E95_RS01005;old_locus_tag=C9E95_01020 NZ_PYJW01000015.1 Protein Homology CDS 45673 46782 . - 0 ID=cds-WP_000988802.1;Parent=gene-C9E95_RS01005;Dbxref=GenBank:WP_000988802.1;Name=WP_000988802.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462518.1;locus_tag=C9E95_RS01005;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_000988802.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 46786 49086 . - . ID=gene-C9E95_RS01010;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=C9E95_RS01010;old_locus_tag=C9E95_01025 NZ_PYJW01000015.1 Protein Homology CDS 46786 49086 . - 0 ID=cds-WP_000823807.1;Parent=gene-C9E95_RS01010;Dbxref=GenBank:WP_000823807.1;Name=WP_000823807.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462519.1;locus_tag=C9E95_RS01010;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_000823807.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 49097 51721 . - . ID=gene-C9E95_RS01015;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=C9E95_RS01015;old_locus_tag=C9E95_01030 NZ_PYJW01000015.1 Protein Homology CDS 49097 51721 . - 0 ID=cds-WP_024798347.1;Parent=gene-C9E95_RS01015;Dbxref=GenBank:WP_024798347.1;Name=WP_024798347.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462520.1;locus_tag=C9E95_RS01015;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_024798347.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 51718 52470 . - . ID=gene-C9E95_RS01020;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=C9E95_RS01020;old_locus_tag=C9E95_01035 NZ_PYJW01000015.1 Protein Homology CDS 51718 52470 . - 0 ID=cds-WP_000996120.1;Parent=gene-C9E95_RS01020;Dbxref=GenBank:WP_000996120.1;Name=WP_000996120.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462521.1;locus_tag=C9E95_RS01020;product=cellulose biosynthesis protein BcsQ;protein_id=WP_000996120.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 52471 52674 . - . ID=gene-C9E95_RS01025;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=C9E95_RS01025;old_locus_tag=C9E95_01040 NZ_PYJW01000015.1 Protein Homology CDS 52471 52674 . - 0 ID=cds-WP_000282616.1;Parent=gene-C9E95_RS01025;Dbxref=GenBank:WP_000282616.1;Name=WP_000282616.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462522.1;locus_tag=C9E95_RS01025;product=cellulose biosynthesis protein BcsR;protein_id=WP_000282616.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 52919 54490 . + . ID=gene-C9E95_RS01030;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=C9E95_RS01030;old_locus_tag=C9E95_01045 NZ_PYJW01000015.1 Protein Homology CDS 52919 54490 . + 0 ID=cds-WP_023197652.1;Parent=gene-C9E95_RS01030;Dbxref=GenBank:WP_023197652.1;Name=WP_023197652.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462523.1;locus_tag=C9E95_RS01030;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WP_023197652.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 54487 54678 . + . ID=gene-C9E95_RS01035;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=C9E95_RS01035;old_locus_tag=C9E95_01050 NZ_PYJW01000015.1 Protein Homology CDS 54487 54678 . + 0 ID=cds-WP_000988321.1;Parent=gene-C9E95_RS01035;Dbxref=GenBank:WP_000988321.1;Name=WP_000988321.1;Ontology_term=GO:0052324;gbkey=CDS;gene=bcsF;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462524.1;locus_tag=C9E95_RS01035;product=cellulose biosynthesis protein BcsF;protein_id=WP_000988321.1;transl_table=11 NZ_PYJW01000015.1 RefSeq gene 54675 56354 . + . ID=gene-C9E95_RS01040;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=C9E95_RS01040;old_locus_tag=C9E95_01055 NZ_PYJW01000015.1 Protein Homology CDS 54675 56354 . + 0 ID=cds-WP_000192022.1;Parent=gene-C9E95_RS01040;Dbxref=GenBank:WP_000192022.1;Name=WP_000192022.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462525.1;locus_tag=C9E95_RS01040;product=cellulose biosynthesis protein BcsG;protein_id=WP_000192022.1;transl_table=11 ##sequence-region NZ_PYJW01000049.1 1 55749 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000049.1 RefSeq region 1 55749 . + . ID=NZ_PYJW01000049.1:1..55749;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000049.1 RefSeq gene 1 844 . + . ID=gene-C9E95_RS03765;Name=C9E95_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03765;old_locus_tag=C9E95_03855;partial=true;start_range=.,1 NZ_PYJW01000049.1 Protein Homology CDS 1 844 . + 1 ID=cds-WP_245306707.1;Parent=gene-C9E95_RS03765;Dbxref=GenBank:WP_245306707.1;Name=WP_245306707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461995.3;locus_tag=C9E95_RS03765;partial=true;product=alpha/beta fold hydrolase;protein_id=WP_245306707.1;start_range=.,1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 1050 1970 . + . ID=gene-C9E95_RS03770;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=C9E95_RS03770;old_locus_tag=C9E95_03860 NZ_PYJW01000049.1 Protein Homology CDS 1050 1970 . + 0 ID=cds-WP_000105550.1;Parent=gene-C9E95_RS03770;Dbxref=GenBank:WP_000105550.1;Name=WP_000105550.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461994.1;locus_tag=C9E95_RS03770;product=agmatinase;protein_id=WP_000105550.1;transl_table=11 NZ_PYJW01000049.1 RefSeq pseudogene 1974 2058 . + . ID=gene-C9E95_RS23700;Name=C9E95_RS23700;end_range=2058,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23700;old_locus_tag=C9E95_03865;partial=true;pseudo=true;start_range=.,1974 NZ_PYJW01000049.1 Protein Homology CDS 1974 2058 . + 0 ID=cds-C9E95_RS23700;Parent=gene-C9E95_RS23700;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2058,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=C9E95_RS23700;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1974;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 2071 2829 . - . ID=gene-C9E95_RS03780;Name=C9E95_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03780;old_locus_tag=C9E95_03870 NZ_PYJW01000049.1 Protein Homology CDS 2071 2829 . - 0 ID=cds-WP_000701830.1;Parent=gene-C9E95_RS03780;Dbxref=GenBank:WP_000701830.1;Name=WP_000701830.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461993.1;locus_tag=C9E95_RS03780;product=M48 family metallopeptidase;protein_id=WP_000701830.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 3105 5096 . + . ID=gene-C9E95_RS03785;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=C9E95_RS03785;old_locus_tag=C9E95_03875 NZ_PYJW01000049.1 Protein Homology CDS 3105 5096 . + 0 ID=cds-WP_000098650.1;Parent=gene-C9E95_RS03785;Dbxref=GenBank:WP_000098650.1;Name=WP_000098650.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461992.1;locus_tag=C9E95_RS03785;product=transketolase;protein_id=WP_000098650.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 5140 5796 . - . ID=gene-C9E95_RS03790;Name=C9E95_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03790;old_locus_tag=C9E95_03880 NZ_PYJW01000049.1 Protein Homology CDS 5140 5796 . - 0 ID=cds-WP_023993950.1;Parent=gene-C9E95_RS03790;Dbxref=GenBank:WP_023993950.1;Name=WP_023993950.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461991.1;locus_tag=C9E95_RS03790;product=ABC transporter ATP-binding protein;protein_id=WP_023993950.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 5790 6467 . - . ID=gene-C9E95_RS03795;Name=C9E95_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03795;old_locus_tag=C9E95_03885 NZ_PYJW01000049.1 Protein Homology CDS 5790 6467 . - 0 ID=cds-WP_001524843.1;Parent=gene-C9E95_RS03795;Dbxref=GenBank:WP_001524843.1;Name=WP_001524843.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461990.1;locus_tag=C9E95_RS03795;product=ABC transporter ATP-binding protein;protein_id=WP_001524843.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 6455 7162 . - . ID=gene-C9E95_RS03800;Name=C9E95_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03800;old_locus_tag=C9E95_03890 NZ_PYJW01000049.1 Protein Homology CDS 6455 7162 . - 0 ID=cds-WP_080204019.1;Parent=gene-C9E95_RS03800;Dbxref=GenBank:WP_080204019.1;Name=WP_080204019.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461989.1;locus_tag=C9E95_RS03800;product=energy-coupling factor transporter transmembrane component T;protein_id=WP_080204019.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 7163 7741 . - . ID=gene-C9E95_RS03805;Name=C9E95_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03805;old_locus_tag=C9E95_03895 NZ_PYJW01000049.1 Protein Homology CDS 7163 7741 . - 0 ID=cds-WP_000124001.1;Parent=gene-C9E95_RS03805;Dbxref=GenBank:WP_000124001.1;Name=WP_000124001.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461988.1;locus_tag=C9E95_RS03805;product=ECF transporter S component;protein_id=WP_000124001.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 7767 8192 . - . ID=gene-C9E95_RS03810;Name=C9E95_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03810;old_locus_tag=C9E95_03900 NZ_PYJW01000049.1 Protein Homology CDS 7767 8192 . - 0 ID=cds-WP_000218564.1;Parent=gene-C9E95_RS03810;Dbxref=GenBank:WP_000218564.1;Name=WP_000218564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461987.1;locus_tag=C9E95_RS03810;product=PPC domain-containing DNA-binding protein;protein_id=WP_000218564.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 8566 9612 . + . ID=gene-C9E95_RS03820;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=C9E95_RS03820;old_locus_tag=C9E95_03910 NZ_PYJW01000049.1 Protein Homology CDS 8566 9612 . + 0 ID=cds-WP_080204018.1;Parent=gene-C9E95_RS03820;Dbxref=GenBank:WP_080204018.1;Name=WP_080204018.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461986.1;locus_tag=C9E95_RS03820;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_080204018.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 9634 10797 . + . ID=gene-C9E95_RS03825;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=C9E95_RS03825;old_locus_tag=C9E95_03915 NZ_PYJW01000049.1 Protein Homology CDS 9634 10797 . + 0 ID=cds-WP_000111274.1;Parent=gene-C9E95_RS03825;Dbxref=GenBank:WP_000111274.1;Name=WP_000111274.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=C9E95_RS03825;product=phosphoglycerate kinase;protein_id=WP_000111274.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 10899 11978 . + . ID=gene-C9E95_RS03830;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=C9E95_RS03830;old_locus_tag=C9E95_03920 NZ_PYJW01000049.1 Protein Homology CDS 10899 11978 . + 0 ID=cds-WP_000034386.1;Parent=gene-C9E95_RS03830;Dbxref=GenBank:WP_000034386.1;Name=WP_000034386.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=C9E95_RS03830;product=class II fructose-bisphosphate aldolase;protein_id=WP_000034386.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 12211 13071 . + . ID=gene-C9E95_RS03835;Name=C9E95_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03835;old_locus_tag=C9E95_03925 NZ_PYJW01000049.1 Protein Homology CDS 12211 13071 . + 0 ID=cds-WP_080204017.1;Parent=gene-C9E95_RS03835;Dbxref=GenBank:WP_080204017.1;Name=WP_080204017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461983.1;locus_tag=C9E95_RS03835;product=small-conductance mechanosensitive channel MscS;protein_id=WP_080204017.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 13272 13907 . + . ID=gene-C9E95_RS03840;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=C9E95_RS03840;old_locus_tag=C9E95_03930 NZ_PYJW01000049.1 Protein Homology CDS 13272 13907 . + 0 ID=cds-WP_000626863.1;Parent=gene-C9E95_RS03840;Dbxref=GenBank:WP_000626863.1;Name=WP_000626863.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461982.1;locus_tag=C9E95_RS03840;product=arginine exporter ArgO;protein_id=WP_000626863.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 14001 14747 . + . ID=gene-C9E95_RS03845;Name=C9E95_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03845;old_locus_tag=C9E95_03935 NZ_PYJW01000049.1 Protein Homology CDS 14001 14747 . + 0 ID=cds-WP_000669854.1;Parent=gene-C9E95_RS03845;Dbxref=GenBank:WP_000669854.1;Name=WP_000669854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461981.1;locus_tag=C9E95_RS03845;product=oxidative stress defense protein;protein_id=WP_000669854.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 15013 15906 . - . ID=gene-C9E95_RS03855;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=C9E95_RS03855;old_locus_tag=C9E95_03945 NZ_PYJW01000049.1 Protein Homology CDS 15013 15906 . - 0 ID=cds-WP_000828345.1;Parent=gene-C9E95_RS03855;Dbxref=GenBank:WP_000828345.1;Name=WP_000828345.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461980.1;locus_tag=C9E95_RS03855;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_000828345.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 16060 16719 . + . ID=gene-C9E95_RS03860;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=C9E95_RS03860;old_locus_tag=C9E95_03950 NZ_PYJW01000049.1 Protein Homology CDS 16060 16719 . + 0 ID=cds-WP_000189741.1;Parent=gene-C9E95_RS03860;Dbxref=GenBank:WP_000189741.1;Name=WP_000189741.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461979.1;locus_tag=C9E95_RS03860;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_000189741.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 16986 18218 . + . ID=gene-C9E95_RS03865;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=C9E95_RS03865;old_locus_tag=C9E95_03955 NZ_PYJW01000049.1 Protein Homology CDS 16986 18218 . + 0 ID=cds-WP_001151627.1;Parent=gene-C9E95_RS03865;Dbxref=GenBank:WP_001151627.1;Name=WP_001151627.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461978.1;locus_tag=C9E95_RS03865;product=phosphoglycerate dehydrogenase;protein_id=WP_001151627.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 18296 18892 . - . ID=gene-C9E95_RS03870;Name=C9E95_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03870;old_locus_tag=C9E95_03960 NZ_PYJW01000049.1 Protein Homology CDS 18296 18892 . - 0 ID=cds-WP_080204016.1;Parent=gene-C9E95_RS03870;Dbxref=GenBank:WP_080204016.1;Name=WP_080204016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=C9E95_RS03870;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_080204016.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 18913 19096 . - . ID=gene-C9E95_RS03875;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=C9E95_RS03875;old_locus_tag=C9E95_03965 NZ_PYJW01000049.1 cmsearch ncRNA 18913 19096 . - . ID=rna-C9E95_RS03875;Parent=gene-C9E95_RS03875;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS03875;product=6S RNA NZ_PYJW01000049.1 cmsearch exon 18913 19096 . - . ID=exon-C9E95_RS03875-1;Parent=rna-C9E95_RS03875;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS03875;product=6S RNA NZ_PYJW01000049.1 RefSeq gene 19138 19467 . - . ID=gene-C9E95_RS03880;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=C9E95_RS03880;old_locus_tag=C9E95_03970 NZ_PYJW01000049.1 Protein Homology CDS 19138 19467 . - 0 ID=cds-WP_001276011.1;Parent=gene-C9E95_RS03880;Dbxref=GenBank:WP_001276011.1;Name=WP_001276011.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461976.1;locus_tag=C9E95_RS03880;product=cell division protein ZapA;protein_id=WP_001276011.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 19634 20212 . + . ID=gene-C9E95_RS03885;Name=C9E95_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03885;old_locus_tag=C9E95_03980 NZ_PYJW01000049.1 Protein Homology CDS 19634 20212 . + 0 ID=cds-WP_000027236.1;Parent=gene-C9E95_RS03885;Dbxref=GenBank:WP_000027236.1;Name=WP_000027236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=C9E95_RS03885;product=YecA family protein;protein_id=WP_000027236.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 20237 21553 . + . ID=gene-C9E95_RS03890;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=C9E95_RS03890;old_locus_tag=C9E95_03985 NZ_PYJW01000049.1 Protein Homology CDS 20237 21553 . + 0 ID=cds-WP_080204015.1;Parent=gene-C9E95_RS03890;Dbxref=GenBank:WP_080204015.1;Name=WP_080204015.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461974.1;locus_tag=C9E95_RS03890;product=Xaa-Pro aminopeptidase;protein_id=WP_080204015.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 21550 22728 . + . ID=gene-C9E95_RS03895;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=C9E95_RS03895;old_locus_tag=C9E95_03990 NZ_PYJW01000049.1 Protein Homology CDS 21550 22728 . + 0 ID=cds-WP_080204014.1;Parent=gene-C9E95_RS03895;Dbxref=GenBank:WP_080204014.1;Name=WP_080204014.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461973.2;locus_tag=C9E95_RS03895;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_080204014.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 22854 24056 . + . ID=gene-C9E95_RS03900;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=C9E95_RS03900;old_locus_tag=C9E95_03995 NZ_PYJW01000049.1 Protein Homology CDS 22854 24056 . + 0 ID=cds-WP_052931769.1;Parent=gene-C9E95_RS03900;Dbxref=GenBank:WP_052931769.1;Name=WP_052931769.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461972.1;locus_tag=C9E95_RS03900;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_052931769.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 24511 25605 . + . ID=gene-C9E95_RS03905;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=C9E95_RS03905;old_locus_tag=C9E95_04000 NZ_PYJW01000049.1 Protein Homology CDS 24511 25605 . + 0 ID=cds-WP_000068738.1;Parent=gene-C9E95_RS03905;Dbxref=GenBank:WP_000068738.1;Name=WP_000068738.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461971.1;locus_tag=C9E95_RS03905;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_000068738.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 25631 26020 . + . ID=gene-C9E95_RS03910;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=C9E95_RS03910;old_locus_tag=C9E95_04005 NZ_PYJW01000049.1 Protein Homology CDS 25631 26020 . + 0 ID=cds-WP_001295377.1;Parent=gene-C9E95_RS03910;Dbxref=GenBank:WP_001295377.1;Name=WP_001295377.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=C9E95_RS03910;product=glycine cleavage system protein GcvH;protein_id=WP_001295377.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 26183 29056 . + . ID=gene-C9E95_RS03915;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=C9E95_RS03915;old_locus_tag=C9E95_04010 NZ_PYJW01000049.1 Protein Homology CDS 26183 29056 . + 0 ID=cds-WP_023993953.1;Parent=gene-C9E95_RS03915;Dbxref=GenBank:WP_023993953.1;Name=WP_023993953.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461969.1;locus_tag=C9E95_RS03915;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_023993953.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 29512 30405 . + . ID=gene-C9E95_RS03925;Name=C9E95_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03925;old_locus_tag=C9E95_04020 NZ_PYJW01000049.1 Protein Homology CDS 29512 30405 . + 0 ID=cds-WP_000819375.1;Parent=gene-C9E95_RS03925;Dbxref=GenBank:WP_000819375.1;Name=WP_000819375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461968.1;locus_tag=C9E95_RS03925;product=transporter;protein_id=WP_000819375.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 30453 31886 . - . ID=gene-C9E95_RS03930;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=C9E95_RS03930;old_locus_tag=C9E95_04025 NZ_PYJW01000049.1 Protein Homology CDS 30453 31886 . - 0 ID=cds-WP_001230139.1;Parent=gene-C9E95_RS03930;Dbxref=GenBank:WP_001230139.1;Name=WP_001230139.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461967.1;locus_tag=C9E95_RS03930;product=6-phospho-beta-glucosidase BglA;protein_id=WP_001230139.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 32044 32355 . + . ID=gene-C9E95_RS03935;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=C9E95_RS03935;old_locus_tag=C9E95_04030 NZ_PYJW01000049.1 Protein Homology CDS 32044 32355 . + 0 ID=cds-WP_001182976.1;Parent=gene-C9E95_RS03935;Dbxref=GenBank:WP_001182976.1;Name=WP_001182976.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461966.1;locus_tag=C9E95_RS03935;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_001182976.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 32519 33178 . + . ID=gene-C9E95_RS03940;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=C9E95_RS03940;old_locus_tag=C9E95_04035 NZ_PYJW01000049.1 Protein Homology CDS 32519 33178 . + 0 ID=cds-WP_000250289.1;Parent=gene-C9E95_RS03940;Dbxref=GenBank:WP_000250289.1;Name=WP_000250289.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461965.1;locus_tag=C9E95_RS03940;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_000250289.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 33294 34274 . - . ID=gene-C9E95_RS03945;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=C9E95_RS03945;old_locus_tag=C9E95_04040 NZ_PYJW01000049.1 Protein Homology CDS 33294 34274 . - 0 ID=cds-WP_023260866.1;Parent=gene-C9E95_RS03945;Dbxref=GenBank:WP_023260866.1;Name=WP_023260866.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461964.1;locus_tag=C9E95_RS03945;product=tRNA-modifying protein YgfZ;protein_id=WP_023260866.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 34524 34790 . + . ID=gene-C9E95_RS03950;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=C9E95_RS03950;old_locus_tag=C9E95_04050 NZ_PYJW01000049.1 Protein Homology CDS 34524 34790 . + 0 ID=cds-WP_079946644.1;Parent=gene-C9E95_RS03950;Dbxref=GenBank:WP_079946644.1;Name=WP_079946644.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=C9E95_RS03950;product=FAD assembly factor SdhE;protein_id=WP_079946644.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 34771 35184 . + . ID=gene-C9E95_RS03955;Name=C9E95_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03955;old_locus_tag=C9E95_04055 NZ_PYJW01000049.1 Protein Homology CDS 34771 35184 . + 0 ID=cds-WP_000244761.1;Parent=gene-C9E95_RS03955;Dbxref=GenBank:WP_000244761.1;Name=WP_000244761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461962.1;locus_tag=C9E95_RS03955;product=protein YgfX;protein_id=WP_000244761.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 35237 35758 . - . ID=gene-C9E95_RS03960;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=C9E95_RS03960;old_locus_tag=C9E95_04060 NZ_PYJW01000049.1 Protein Homology CDS 35237 35758 . - 0 ID=cds-WP_001055885.1;Parent=gene-C9E95_RS03960;Dbxref=GenBank:WP_001055885.1;Name=WP_001055885.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461961.1;locus_tag=C9E95_RS03960;product=flavodoxin FldB;protein_id=WP_001055885.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 35871 36767 . + . ID=gene-C9E95_RS03965;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=C9E95_RS03965;old_locus_tag=C9E95_04065 NZ_PYJW01000049.1 Protein Homology CDS 35871 36767 . + 0 ID=cds-WP_000434302.1;Parent=gene-C9E95_RS03965;Dbxref=GenBank:WP_000434302.1;Name=WP_000434302.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461960.1;locus_tag=C9E95_RS03965;product=site-specific tyrosine recombinase XerD;protein_id=WP_000434302.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 36791 37504 . + . ID=gene-C9E95_RS03970;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=C9E95_RS03970;old_locus_tag=C9E95_04070 NZ_PYJW01000049.1 Protein Homology CDS 36791 37504 . + 0 ID=cds-WP_000745614.1;Parent=gene-C9E95_RS03970;Dbxref=GenBank:WP_000745614.1;Name=WP_000745614.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461959.1;locus_tag=C9E95_RS03970;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_000745614.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 37510 39243 . + . ID=gene-C9E95_RS03975;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=C9E95_RS03975;old_locus_tag=C9E95_04075 NZ_PYJW01000049.1 Protein Homology CDS 37510 39243 . + 0 ID=cds-WP_000813394.1;Parent=gene-C9E95_RS03975;Dbxref=GenBank:WP_000813394.1;Name=WP_000813394.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461958.1;locus_tag=C9E95_RS03975;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_000813394.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 39348 40446 . + . ID=gene-C9E95_RS03980;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=C9E95_RS03980;old_locus_tag=C9E95_04080 NZ_PYJW01000049.1 Protein Homology CDS 39348 39422 . + 0 ID=cds-WP_096059418.1;Parent=gene-C9E95_RS03980;Dbxref=GenBank:WP_096059418.1;Name=WP_096059418.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=C9E95_RS03980;product=peptide chain release factor 2;protein_id=WP_096059418.1;transl_table=11 NZ_PYJW01000049.1 Protein Homology CDS 39424 40446 . + 0 ID=cds-WP_096059418.1;Parent=gene-C9E95_RS03980;Dbxref=GenBank:WP_096059418.1;Name=WP_096059418.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=C9E95_RS03980;product=peptide chain release factor 2;protein_id=WP_096059418.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 40456 41973 . + . ID=gene-C9E95_RS03985;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=C9E95_RS03985;old_locus_tag=C9E95_04085 NZ_PYJW01000049.1 Protein Homology CDS 40456 41973 . + 0 ID=cds-WP_000003339.1;Parent=gene-C9E95_RS03985;Dbxref=GenBank:WP_000003339.1;Name=WP_000003339.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=C9E95_RS03985;product=lysine--tRNA ligase;protein_id=WP_000003339.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 42049 42594 . - . ID=gene-C9E95_RS03990;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=C9E95_RS03990;old_locus_tag=C9E95_04090 NZ_PYJW01000049.1 Protein Homology CDS 42049 42594 . - 0 ID=cds-WP_000133994.1;Parent=gene-C9E95_RS03990;Dbxref=GenBank:WP_000133994.1;Name=WP_000133994.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461955.1;locus_tag=C9E95_RS03990;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_000133994.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 42859 43617 . + . ID=gene-C9E95_RS03995;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=C9E95_RS03995;old_locus_tag=C9E95_04100 NZ_PYJW01000049.1 Protein Homology CDS 42859 43617 . + 0 ID=cds-WP_000244328.1;Parent=gene-C9E95_RS03995;Dbxref=GenBank:WP_000244328.1;Name=WP_000244328.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461954.1;locus_tag=C9E95_RS03995;product=amidase activator ActS;protein_id=WP_000244328.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 43697 43770 . + . ID=gene-C9E95_RS04000;Name=C9E95_RS04000;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS04000;old_locus_tag=C9E95_04105 NZ_PYJW01000049.1 tRNAscan-SE tRNA 43697 43770 . + . ID=rna-C9E95_RS04000;Parent=gene-C9E95_RS04000;anticodon=(pos:43729..43731);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS04000;product=tRNA-Gly NZ_PYJW01000049.1 tRNAscan-SE exon 43697 43770 . + . ID=exon-C9E95_RS04000-1;Parent=rna-C9E95_RS04000;anticodon=(pos:43729..43731);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS04000;product=tRNA-Gly NZ_PYJW01000049.1 RefSeq gene 43935 45038 . + . ID=gene-C9E95_RS04005;Name=C9E95_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04005;old_locus_tag=C9E95_04110 NZ_PYJW01000049.1 Protein Homology CDS 43935 45038 . + 0 ID=cds-WP_023993954.1;Parent=gene-C9E95_RS04005;Dbxref=GenBank:WP_023993954.1;Name=WP_023993954.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192954.1;locus_tag=C9E95_RS04005;product=tyrosine-type recombinase/integrase;protein_id=WP_023993954.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 45193 45543 . + . ID=gene-C9E95_RS04010;Name=arsR;gbkey=Gene;gene=arsR;gene_biotype=protein_coding;locus_tag=C9E95_RS04010;old_locus_tag=C9E95_04115 NZ_PYJW01000049.1 Protein Homology CDS 45193 45543 . + 0 ID=cds-WP_023993955.1;Parent=gene-C9E95_RS04010;Dbxref=GenBank:WP_023993955.1;Name=WP_023993955.1;gbkey=CDS;gene=arsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206664.1;locus_tag=C9E95_RS04010;product=As(III)-sensing metalloregulatory transcriptional repressor ArsR;protein_id=WP_023993955.1;transl_table=11 NZ_PYJW01000049.1 RefSeq pseudogene 45623 45796 . + . ID=gene-C9E95_RS04015;Name=C9E95_RS04015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS04015;old_locus_tag=C9E95_04120;partial=true;pseudo=true;start_range=.,45623 NZ_PYJW01000049.1 Protein Homology CDS 45623 45796 . + 0 ID=cds-C9E95_RS04015;Parent=gene-C9E95_RS04015;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312402.1;locus_tag=C9E95_RS04015;partial=true;product=arsenate reductase;pseudo=true;start_range=.,45623;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 46010 46975 . + . ID=gene-C9E95_RS04020;Name=C9E95_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04020;old_locus_tag=C9E95_04125 NZ_PYJW01000049.1 Protein Homology CDS 46010 46975 . + 0 ID=cds-WP_001123709.1;Parent=gene-C9E95_RS04020;Dbxref=GenBank:WP_001123709.1;Name=WP_001123709.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524950.1;locus_tag=C9E95_RS04020;product=sugar-binding transcriptional regulator;protein_id=WP_001123709.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 47149 47607 . - . ID=gene-C9E95_RS04025;Name=C9E95_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04025;old_locus_tag=C9E95_04130 NZ_PYJW01000049.1 Protein Homology CDS 47149 47607 . - 0 ID=cds-WP_001683480.1;Parent=gene-C9E95_RS04025;Dbxref=GenBank:WP_001683480.1;Name=WP_001683480.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001683480.1;locus_tag=C9E95_RS04025;product=PTS sugar transporter subunit IIA;protein_id=WP_001683480.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 47615 47899 . - . ID=gene-C9E95_RS04030;Name=C9E95_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04030;old_locus_tag=C9E95_04135 NZ_PYJW01000049.1 Protein Homology CDS 47615 47899 . - 0 ID=cds-WP_000723161.1;Parent=gene-C9E95_RS04030;Dbxref=GenBank:WP_000723161.1;Name=WP_000723161.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172369.1;locus_tag=C9E95_RS04030;product=PTS sugar transporter subunit IIB;protein_id=WP_000723161.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 47921 49291 . - . ID=gene-C9E95_RS04035;Name=C9E95_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04035;old_locus_tag=C9E95_04140 NZ_PYJW01000049.1 Protein Homology CDS 47921 49291 . - 0 ID=cds-WP_023993958.1;Parent=gene-C9E95_RS04035;Dbxref=GenBank:WP_023993958.1;Name=WP_023993958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015964568.1;locus_tag=C9E95_RS04035;product=PTS galactitol transporter subunit IIC;protein_id=WP_023993958.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 49295 49831 . - . ID=gene-C9E95_RS04040;Name=C9E95_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04040;old_locus_tag=C9E95_04145 NZ_PYJW01000049.1 Protein Homology CDS 49295 49831 . - 0 ID=cds-WP_000850102.1;Parent=gene-C9E95_RS04040;Dbxref=GenBank:WP_000850102.1;Name=WP_000850102.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000850105.1;locus_tag=C9E95_RS04040;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_000850102.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 50212 50967 . + . ID=gene-C9E95_RS04045;Name=C9E95_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04045;old_locus_tag=C9E95_04150 NZ_PYJW01000049.1 Protein Homology CDS 50212 50967 . + 0 ID=cds-WP_001531807.1;Parent=gene-C9E95_RS04045;Dbxref=GenBank:WP_001531807.1;Name=WP_001531807.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000281586.1;locus_tag=C9E95_RS04045;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001531807.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 51286 51765 . + . ID=gene-C9E95_RS04050;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=C9E95_RS04050;old_locus_tag=C9E95_04155 NZ_PYJW01000049.1 Protein Homology CDS 51286 51765 . + 0 ID=cds-WP_023993959.1;Parent=gene-C9E95_RS04050;Dbxref=GenBank:WP_023993959.1;Name=WP_023993959.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012512955.1;locus_tag=C9E95_RS04050;product=PTS galactitol transporter subunit IIA;protein_id=WP_023993959.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 51787 52080 . + . ID=gene-C9E95_RS04055;Name=C9E95_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04055;old_locus_tag=C9E95_04160 NZ_PYJW01000049.1 Protein Homology CDS 51787 52080 . + 0 ID=cds-WP_000628511.1;Parent=gene-C9E95_RS04055;Dbxref=GenBank:WP_000628511.1;Name=WP_000628511.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004105500.1;locus_tag=C9E95_RS04055;product=PTS sugar transporter subunit IIB;protein_id=WP_000628511.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 52108 53361 . + . ID=gene-C9E95_RS04060;Name=C9E95_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04060;old_locus_tag=C9E95_04165 NZ_PYJW01000049.1 Protein Homology CDS 52108 53361 . + 0 ID=cds-WP_000425557.1;Parent=gene-C9E95_RS04060;Dbxref=GenBank:WP_000425557.1;Name=WP_000425557.1;Ontology_term=GO:0009401,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000425551.1;locus_tag=C9E95_RS04060;product=PTS transporter subunit IIC;protein_id=WP_000425557.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 53380 54024 . + . ID=gene-C9E95_RS04065;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=C9E95_RS04065;old_locus_tag=C9E95_04170 NZ_PYJW01000049.1 Protein Homology CDS 53380 54024 . + 0 ID=cds-WP_000057267.1;Parent=gene-C9E95_RS04065;Dbxref=GenBank:WP_000057267.1;Name=WP_000057267.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001062775.1;locus_tag=C9E95_RS04065;product=ribulose-phosphate 3-epimerase;protein_id=WP_000057267.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 54147 54899 . + . ID=gene-C9E95_RS04070;Name=C9E95_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04070;old_locus_tag=C9E95_04175 NZ_PYJW01000049.1 Protein Homology CDS 54147 54899 . + 0 ID=cds-WP_000032693.1;Parent=gene-C9E95_RS04070;Dbxref=GenBank:WP_000032693.1;Name=WP_000032693.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000064391.1;locus_tag=C9E95_RS04070;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_000032693.1;transl_table=11 NZ_PYJW01000049.1 RefSeq gene 54914 55474 . + . ID=gene-C9E95_RS04075;Name=hxlB;gbkey=Gene;gene=hxlB;gene_biotype=protein_coding;locus_tag=C9E95_RS04075;old_locus_tag=C9E95_04180 NZ_PYJW01000049.1 Protein Homology CDS 54914 55474 . + 0 ID=cds-WP_000116120.1;Parent=gene-C9E95_RS04075;Dbxref=GenBank:WP_000116120.1;Name=WP_000116120.1;Ontology_term=GO:1901135,GO:0016853,GO:0043800;gbkey=CDS;gene=hxlB;go_function=isomerase activity|0016853||IEA,6-phospho-3-hexuloisomerase activity|0043800||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000116013.1;locus_tag=C9E95_RS04075;product=6-phospho-3-hexuloisomerase;protein_id=WP_000116120.1;transl_table=11 ##sequence-region NZ_PYJW01000008.1 1 897 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000008.1 RefSeq region 1 897 . + . ID=NZ_PYJW01000008.1:1..897;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000008.1 RefSeq gene 38 526 . + . ID=gene-C9E95_RS00695;Name=C9E95_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00695;old_locus_tag=C9E95_00705 NZ_PYJW01000008.1 GeneMarkS-2+ CDS 38 526 . + 0 ID=cds-WP_131040954.1;Parent=gene-C9E95_RS00695;Dbxref=GenBank:WP_131040954.1;Name=WP_131040954.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS00695;product=hypothetical protein;protein_id=WP_131040954.1;transl_table=11 NZ_PYJW01000008.1 RefSeq pseudogene 592 804 . - . ID=gene-C9E95_RS00700;Name=C9E95_RS00700;end_range=804,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS00700;old_locus_tag=C9E95_00710;partial=true;pseudo=true NZ_PYJW01000008.1 Protein Homology CDS 592 804 . - 0 ID=cds-C9E95_RS00700;Parent=gene-C9E95_RS00700;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;end_range=804,.;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784875.1;locus_tag=C9E95_RS00700;partial=true;product=SymE family type I addiction module toxin;pseudo=true;transl_table=11 ##sequence-region NZ_PYJW01000011.1 1 884 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000011.1 RefSeq region 1 884 . + . ID=NZ_PYJW01000011.1:1..884;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000011.1 RefSeq gene 1 870 . - . ID=gene-C9E95_RS00715;Name=C9E95_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00715;old_locus_tag=C9E95_00725;partial=true;start_range=.,1 NZ_PYJW01000011.1 Protein Homology CDS 1 870 . - 0 ID=cds-WP_135369794.1;Parent=gene-C9E95_RS00715;Dbxref=GenBank:WP_135369794.1;Name=WP_135369794.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539513.1;locus_tag=C9E95_RS00715;partial=true;product=LysR family transcriptional regulator;protein_id=WP_135369794.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJW01000188.1 1 54476 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000188.1 RefSeq region 1 54476 . + . ID=NZ_PYJW01000188.1:1..54476;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000188.1 RefSeq gene 87 908 . + . ID=gene-C9E95_RS21925;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=C9E95_RS21925;old_locus_tag=C9E95_22460 NZ_PYJW01000188.1 Protein Homology CDS 87 908 . + 0 ID=cds-WP_001281933.1;Parent=gene-C9E95_RS21925;Dbxref=GenBank:WP_001281933.1;Name=WP_001281933.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=C9E95_RS21925;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001281933.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 1013 2254 . - . ID=gene-C9E95_RS21930;Name=C9E95_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21930;old_locus_tag=C9E95_22465 NZ_PYJW01000188.1 Protein Homology CDS 1013 2254 . - 0 ID=cds-WP_021000793.1;Parent=gene-C9E95_RS21930;Dbxref=GenBank:WP_021000793.1;Name=WP_021000793.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462119.1;locus_tag=C9E95_RS21930;product=multifunctional CCA addition/repair protein;protein_id=WP_021000793.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 2317 2931 . - . ID=gene-C9E95_RS21935;Name=C9E95_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21935;old_locus_tag=C9E95_22470 NZ_PYJW01000188.1 Protein Homology CDS 2317 2931 . - 0 ID=cds-WP_001125344.1;Parent=gene-C9E95_RS21935;Dbxref=GenBank:WP_001125344.1;Name=WP_001125344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462118.1;locus_tag=C9E95_RS21935;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_001125344.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 3173 4474 . + . ID=gene-C9E95_RS21940;Name=C9E95_RS21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21940;old_locus_tag=C9E95_22480 NZ_PYJW01000188.1 Protein Homology CDS 3173 4474 . + 0 ID=cds-WP_000046224.1;Parent=gene-C9E95_RS21940;Dbxref=GenBank:WP_000046224.1;Name=WP_000046224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462117.1;locus_tag=C9E95_RS21940;product=inorganic triphosphatase;protein_id=WP_000046224.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 4592 7435 . + . ID=gene-C9E95_RS21945;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=C9E95_RS21945;old_locus_tag=C9E95_22485 NZ_PYJW01000188.1 Protein Homology CDS 4592 7435 . + 0 ID=cds-WP_000188315.1;Parent=gene-C9E95_RS21945;Dbxref=GenBank:WP_000188315.1;Name=WP_000188315.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462116.1;locus_tag=C9E95_RS21945;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_000188315.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 7483 8916 . + . ID=gene-C9E95_RS21950;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=C9E95_RS21950;old_locus_tag=C9E95_22490 NZ_PYJW01000188.1 Protein Homology CDS 7483 8916 . + 0 ID=cds-WP_000867682.1;Parent=gene-C9E95_RS21950;Dbxref=GenBank:WP_000867682.1;Name=WP_000867682.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462115.1;locus_tag=C9E95_RS21950;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_000867682.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 9076 9135 . - . ID=gene-C9E95_RS23335;Name=C9E95_RS23335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23335 NZ_PYJW01000188.1 Protein Homology CDS 9076 9135 . - 0 ID=cds-WP_111754053.1;Parent=gene-C9E95_RS23335;Dbxref=GenBank:WP_111754053.1;Name=WP_111754053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=C9E95_RS23335;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_111754053.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 9375 11054 . - . ID=gene-C9E95_RS21960;Name=C9E95_RS21960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21960;old_locus_tag=C9E95_22500 NZ_PYJW01000188.1 Protein Homology CDS 9375 11054 . - 0 ID=cds-WP_000342879.1;Parent=gene-C9E95_RS21960;Dbxref=GenBank:WP_000342879.1;Name=WP_000342879.1;Ontology_term=GO:0016020,GO:0016600;gbkey=CDS;go_component=membrane|0016020||IEA,flotillin complex|0016600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=C9E95_RS21960;product=flotillin family protein;protein_id=WP_000342879.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 11073 11693 . - . ID=gene-C9E95_RS21965;Name=C9E95_RS21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21965;old_locus_tag=C9E95_22505 NZ_PYJW01000188.1 Protein Homology CDS 11073 11693 . - 0 ID=cds-WP_000171739.1;Parent=gene-C9E95_RS21965;Dbxref=GenBank:WP_000171739.1;Name=WP_000171739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462113.1;locus_tag=C9E95_RS21965;product=OB-fold-containig protein;protein_id=WP_000171739.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 11951 12160 . + . ID=gene-C9E95_RS21970;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=C9E95_RS21970;old_locus_tag=C9E95_22510 NZ_PYJW01000188.1 Protein Homology CDS 11951 12160 . + 0 ID=cds-WP_000928927.1;Parent=gene-C9E95_RS21970;Dbxref=GenBank:WP_000928927.1;Name=WP_000928927.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462112.1;locus_tag=C9E95_RS21970;product=cell surface composition regulator GlgS;protein_id=WP_000928927.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 12234 12533 . - . ID=gene-C9E95_RS21975;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=C9E95_RS21975;old_locus_tag=C9E95_22515 NZ_PYJW01000188.1 Protein Homology CDS 12234 12533 . - 0 ID=cds-WP_000566825.1;Parent=gene-C9E95_RS21975;Dbxref=GenBank:WP_000566825.1;Name=WP_000566825.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566825.1;locus_tag=C9E95_RS21975;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_000566825.1;transl_table=11 NZ_PYJW01000188.1 cmsearch riboswitch 12666 12864 . + . ID=id-NZ_PYJW01000188.1:12666..12864;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PYJW01000188.1 RefSeq gene 12970 13623 . + . ID=gene-C9E95_RS21980;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=C9E95_RS21980;old_locus_tag=C9E95_22520 NZ_PYJW01000188.1 Protein Homology CDS 12970 13623 . + 0 ID=cds-WP_001076978.1;Parent=gene-C9E95_RS21980;Dbxref=GenBank:WP_001076978.1;Name=WP_001076978.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462110.1;locus_tag=C9E95_RS21980;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_001076978.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 13794 14471 . - . ID=gene-C9E95_RS21985;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=C9E95_RS21985;old_locus_tag=C9E95_22525 NZ_PYJW01000188.1 Protein Homology CDS 13794 14471 . - 0 ID=cds-WP_000345576.1;Parent=gene-C9E95_RS21985;Dbxref=GenBank:WP_000345576.1;Name=WP_000345576.1;gbkey=CDS;gene=dsbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462109.1;locus_tag=C9E95_RS21985;product=protein-disulfide oxidoreductase DsbI;protein_id=WP_000345576.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 14486 15157 . - . ID=gene-C9E95_RS21990;Name=C9E95_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21990;old_locus_tag=C9E95_22530 NZ_PYJW01000188.1 Protein Homology CDS 14486 15157 . - 0 ID=cds-WP_000096230.1;Parent=gene-C9E95_RS21990;Dbxref=GenBank:WP_000096230.1;Name=WP_000096230.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462108.1;locus_tag=C9E95_RS21990;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_000096230.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 15177 16973 . - . ID=gene-C9E95_RS21995;Name=C9E95_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21995;old_locus_tag=C9E95_22535 NZ_PYJW01000188.1 Protein Homology CDS 15177 16973 . - 0 ID=cds-WP_061378640.1;Parent=gene-C9E95_RS21995;Dbxref=GenBank:WP_061378640.1;Name=WP_061378640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159766.1;locus_tag=C9E95_RS21995;product=aryl-sulfate sulfotransferase;protein_id=WP_061378640.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 17373 17549 . + . ID=gene-C9E95_RS23630;Name=C9E95_RS23630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23630;old_locus_tag=C9E95_22540 NZ_PYJW01000188.1 Protein Homology CDS 17373 17549 . + 0 ID=cds-WP_000469259.1;Parent=gene-C9E95_RS23630;Dbxref=GenBank:WP_000469259.1;Name=WP_000469259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=C9E95_RS23630;product=hypothetical protein;protein_id=WP_000469259.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 17616 18389 . - . ID=gene-C9E95_RS22000;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=C9E95_RS22000;old_locus_tag=C9E95_22545 NZ_PYJW01000188.1 Protein Homology CDS 17616 18389 . - 0 ID=cds-WP_000115871.1;Parent=gene-C9E95_RS22000;Dbxref=GenBank:WP_000115871.1;Name=WP_000115871.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462105.1;locus_tag=C9E95_RS22000;product=zinc transporter ZupT;protein_id=WP_000115871.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 18530 19318 . + . ID=gene-C9E95_RS22005;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=C9E95_RS22005;old_locus_tag=C9E95_22550 NZ_PYJW01000188.1 Protein Homology CDS 18530 19318 . + 0 ID=cds-WP_023232031.1;Parent=gene-C9E95_RS22005;Dbxref=GenBank:WP_023232031.1;Name=WP_023232031.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=C9E95_RS22005;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_023232031.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 19379 20542 . - . ID=gene-C9E95_RS22010;Name=C9E95_RS22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22010;old_locus_tag=C9E95_22555 NZ_PYJW01000188.1 Protein Homology CDS 19379 20542 . - 0 ID=cds-WP_020839017.1;Parent=gene-C9E95_RS22010;Dbxref=GenBank:WP_020839017.1;Name=WP_020839017.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462103.1;locus_tag=C9E95_RS22010;product=glutathionylspermidine synthase family protein;protein_id=WP_020839017.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 20548 21219 . - . ID=gene-C9E95_RS22015;Name=C9E95_RS22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22015;old_locus_tag=C9E95_22560 NZ_PYJW01000188.1 Protein Homology CDS 20548 21219 . - 0 ID=cds-WP_000831528.1;Parent=gene-C9E95_RS22015;Dbxref=GenBank:WP_000831528.1;Name=WP_000831528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462102.1;locus_tag=C9E95_RS22015;product=DUF1190 family protein;protein_id=WP_000831528.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 21432 22907 . - . ID=gene-C9E95_RS22020;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=C9E95_RS22020;old_locus_tag=C9E95_22570 NZ_PYJW01000188.1 Protein Homology CDS 21432 22907 . - 0 ID=cds-WP_015899378.1;Parent=gene-C9E95_RS22020;Dbxref=GenBank:WP_015899378.1;Name=WP_015899378.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462101.3;locus_tag=C9E95_RS22020;product=outer membrane channel protein TolC;protein_id=WP_015899378.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 23108 23740 . + . ID=gene-C9E95_RS22025;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=C9E95_RS22025;old_locus_tag=C9E95_22575 NZ_PYJW01000188.1 Protein Homology CDS 23108 23740 . + 0 ID=cds-WP_001231950.1;Parent=gene-C9E95_RS22025;Dbxref=GenBank:WP_001231950.1;Name=WP_001231950.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462100.1;locus_tag=C9E95_RS22025;product=ADP-ribose diphosphatase;protein_id=WP_001231950.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 23737 24159 . + . ID=gene-C9E95_RS22030;Name=C9E95_RS22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22030;old_locus_tag=C9E95_22580 NZ_PYJW01000188.1 Protein Homology CDS 23737 24159 . + 0 ID=cds-WP_000833404.1;Parent=gene-C9E95_RS22030;Dbxref=GenBank:WP_000833404.1;Name=WP_000833404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462099.1;locus_tag=C9E95_RS22030;product=DUF1249 family protein;protein_id=WP_000833404.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 24184 25011 . + . ID=gene-C9E95_RS22035;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=C9E95_RS22035;old_locus_tag=C9E95_22585 NZ_PYJW01000188.1 Protein Homology CDS 24184 25011 . + 0 ID=cds-WP_000444735.1;Parent=gene-C9E95_RS22035;Dbxref=GenBank:WP_000444735.1;Name=WP_000444735.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462098.1;locus_tag=C9E95_RS22035;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_000444735.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 25011 25592 . + . ID=gene-C9E95_RS22040;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=C9E95_RS22040;old_locus_tag=C9E95_22590 NZ_PYJW01000188.1 Protein Homology CDS 25011 25592 . + 0 ID=cds-WP_000105725.1;Parent=gene-C9E95_RS22040;Dbxref=GenBank:WP_000105725.1;Name=WP_000105725.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462097.1;locus_tag=C9E95_RS22040;product=esterase YqiA;protein_id=WP_000105725.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 25620 27512 . + . ID=gene-C9E95_RS22045;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=C9E95_RS22045;old_locus_tag=C9E95_22595 NZ_PYJW01000188.1 Protein Homology CDS 25620 27512 . + 0 ID=cds-WP_000195318.1;Parent=gene-C9E95_RS22045;Dbxref=GenBank:WP_000195318.1;Name=WP_000195318.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462096.1;locus_tag=C9E95_RS22045;product=DNA topoisomerase IV subunit B;protein_id=WP_000195318.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 27637 27951 . - . ID=gene-C9E95_RS22050;Name=C9E95_RS22050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22050;old_locus_tag=C9E95_22600 NZ_PYJW01000188.1 Protein Homology CDS 27637 27951 . - 0 ID=cds-WP_001626736.1;Parent=gene-C9E95_RS22050;Dbxref=GenBank:WP_001626736.1;Name=WP_001626736.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462095.1;locus_tag=C9E95_RS22050;product=putative quinol monooxygenase;protein_id=WP_001626736.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 27983 28564 . - . ID=gene-C9E95_RS22055;Name=C9E95_RS22055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22055;old_locus_tag=C9E95_22605 NZ_PYJW01000188.1 Protein Homology CDS 27983 28564 . - 0 ID=cds-WP_000065416.1;Parent=gene-C9E95_RS22055;Dbxref=GenBank:WP_000065416.1;Name=WP_000065416.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=C9E95_RS22055;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_000065416.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 28671 30020 . - . ID=gene-C9E95_RS22060;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=C9E95_RS22060;old_locus_tag=C9E95_22610 NZ_PYJW01000188.1 Protein Homology CDS 28671 30020 . - 0 ID=cds-WP_000779327.1;Parent=gene-C9E95_RS22060;Dbxref=GenBank:WP_000779327.1;Name=WP_000779327.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462093.1;locus_tag=C9E95_RS22060;product=quorum sensing histidine kinase QseC;protein_id=WP_000779327.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 30017 30676 . - . ID=gene-C9E95_RS22065;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=C9E95_RS22065;old_locus_tag=C9E95_22615 NZ_PYJW01000188.1 Protein Homology CDS 30017 30676 . - 0 ID=cds-WP_001221574.1;Parent=gene-C9E95_RS22065;Dbxref=GenBank:WP_001221574.1;Name=WP_001221574.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462092.1;locus_tag=C9E95_RS22065;product=quorum sensing response regulator transcription factor QseB;protein_id=WP_001221574.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 30828 31220 . + . ID=gene-C9E95_RS22070;Name=C9E95_RS22070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22070;old_locus_tag=C9E95_22620 NZ_PYJW01000188.1 Protein Homology CDS 30828 31220 . + 0 ID=cds-WP_000731552.1;Parent=gene-C9E95_RS22070;Dbxref=GenBank:WP_000731552.1;Name=WP_000731552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462091.1;locus_tag=C9E95_RS22070;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_000731552.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 31292 32158 . + . ID=gene-C9E95_RS22075;Name=C9E95_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22075;old_locus_tag=C9E95_22625 NZ_PYJW01000188.1 Protein Homology CDS 31292 32158 . + 0 ID=cds-WP_000998810.1;Parent=gene-C9E95_RS22075;Dbxref=GenBank:WP_000998810.1;Name=WP_000998810.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462090.1;locus_tag=C9E95_RS22075;product=AraC family transcriptional regulator;protein_id=WP_000998810.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 32269 34527 . + . ID=gene-C9E95_RS22080;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=C9E95_RS22080;old_locus_tag=C9E95_22630 NZ_PYJW01000188.1 Protein Homology CDS 32269 34527 . + 0 ID=cds-WP_001281853.1;Parent=gene-C9E95_RS22080;Dbxref=GenBank:WP_001281853.1;Name=WP_001281853.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462089.1;locus_tag=C9E95_RS22080;product=DNA topoisomerase IV subunit A;protein_id=WP_001281853.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 34784 35521 . + . ID=gene-C9E95_RS22085;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=C9E95_RS22085;old_locus_tag=C9E95_22635 NZ_PYJW01000188.1 Protein Homology CDS 34784 35521 . + 0 ID=cds-WP_000965730.1;Parent=gene-C9E95_RS22085;Dbxref=GenBank:WP_000965730.1;Name=WP_000965730.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462088.1;locus_tag=C9E95_RS22085;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_000965730.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 35595 37007 . + . ID=gene-C9E95_RS22090;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=C9E95_RS22090;old_locus_tag=C9E95_22640 NZ_PYJW01000188.1 Protein Homology CDS 35595 37007 . + 0 ID=cds-WP_000010658.1;Parent=gene-C9E95_RS22090;Dbxref=GenBank:WP_000010658.1;Name=WP_000010658.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462087.1;locus_tag=C9E95_RS22090;product=cell division protein FtsP;protein_id=WP_000010658.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 37052 38359 . - . ID=gene-C9E95_RS22095;Name=C9E95_RS22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22095;old_locus_tag=C9E95_22645 NZ_PYJW01000188.1 Protein Homology CDS 37052 38359 . - 0 ID=cds-WP_000345261.1;Parent=gene-C9E95_RS22095;Dbxref=GenBank:WP_000345261.1;Name=WP_000345261.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462086.1;locus_tag=C9E95_RS22095;product=TRAP transporter large permease;protein_id=WP_000345261.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 38370 38852 . - . ID=gene-C9E95_RS22100;Name=C9E95_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22100;old_locus_tag=C9E95_22650 NZ_PYJW01000188.1 Protein Homology CDS 38370 38852 . - 0 ID=cds-WP_080203824.1;Parent=gene-C9E95_RS22100;Dbxref=GenBank:WP_080203824.1;Name=WP_080203824.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462085.1;locus_tag=C9E95_RS22100;product=TRAP transporter small permease;protein_id=WP_080203824.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 38894 39877 . - . ID=gene-C9E95_RS22105;Name=C9E95_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22105;old_locus_tag=C9E95_22655 NZ_PYJW01000188.1 Protein Homology CDS 38894 39877 . - 0 ID=cds-WP_000799367.1;Parent=gene-C9E95_RS22105;Dbxref=GenBank:WP_000799367.1;Name=WP_000799367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462084.1;locus_tag=C9E95_RS22105;product=TRAP transporter substrate-binding protein;protein_id=WP_000799367.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 40365 42536 . + . ID=gene-C9E95_RS22110;Name=C9E95_RS22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22110;old_locus_tag=C9E95_22660 NZ_PYJW01000188.1 Protein Homology CDS 40365 42536 . + 0 ID=cds-WP_001274458.1;Parent=gene-C9E95_RS22110;Dbxref=GenBank:WP_001274458.1;Name=WP_001274458.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462083.1;locus_tag=C9E95_RS22110;product=YgiQ family radical SAM protein;protein_id=WP_001274458.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 42739 42933 . + . ID=gene-C9E95_RS22115;Name=C9E95_RS22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22115;old_locus_tag=C9E95_22665 NZ_PYJW01000188.1 GeneMarkS-2+ CDS 42739 42933 . + 0 ID=cds-WP_000525382.1;Parent=gene-C9E95_RS22115;Dbxref=GenBank:WP_000525382.1;Name=WP_000525382.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS22115;product=hypothetical protein;protein_id=WP_000525382.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 43091 43546 . - . ID=gene-C9E95_RS22125;Name=C9E95_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22125;old_locus_tag=C9E95_22670 NZ_PYJW01000188.1 Protein Homology CDS 43091 43546 . - 0 ID=cds-WP_000128242.1;Parent=gene-C9E95_RS22125;Dbxref=GenBank:WP_000128242.1;Name=WP_000128242.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462082.1;locus_tag=C9E95_RS22125;product=HIT family protein;protein_id=WP_000128242.1;transl_table=11 NZ_PYJW01000188.1 RefSeq pseudogene 43591 45076 . - . ID=gene-C9E95_RS22130;Name=C9E95_RS22130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS22130;old_locus_tag=C9E95_22675;pseudo=true NZ_PYJW01000188.1 Protein Homology CDS 43591 45076 . - 0 ID=cds-C9E95_RS22130;Parent=gene-C9E95_RS22130;Note=frameshifted;Ontology_term=GO:0006820,GO:0008509,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462081.3;locus_tag=C9E95_RS22130;product=DASS family sodium-coupled anion symporter;pseudo=true;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 45242 46069 . - . ID=gene-C9E95_RS22135;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=C9E95_RS22135;old_locus_tag=C9E95_22680 NZ_PYJW01000188.1 Protein Homology CDS 45242 46069 . - 0 ID=cds-WP_000013100.1;Parent=gene-C9E95_RS22135;Dbxref=GenBank:WP_000013100.1;Name=WP_000013100.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=C9E95_RS22135;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_000013100.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 46175 47338 . - . ID=gene-C9E95_RS22140;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=C9E95_RS22140;old_locus_tag=C9E95_22685 NZ_PYJW01000188.1 Protein Homology CDS 46175 47338 . - 0 ID=cds-WP_001058729.1;Parent=gene-C9E95_RS22140;Dbxref=GenBank:WP_001058729.1;Name=WP_001058729.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462079.1;locus_tag=C9E95_RS22140;product=alcohol dehydrogenase;protein_id=WP_001058729.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 47531 48430 . + . ID=gene-C9E95_RS22145;Name=C9E95_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22145;old_locus_tag=C9E95_22690 NZ_PYJW01000188.1 Protein Homology CDS 47531 48430 . + 0 ID=cds-WP_001078198.1;Parent=gene-C9E95_RS22145;Dbxref=GenBank:WP_001078198.1;Name=WP_001078198.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=C9E95_RS22145;product=AraC family transcriptional regulator;protein_id=WP_001078198.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 48494 49153 . - . ID=gene-C9E95_RS22150;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=C9E95_RS22150;old_locus_tag=C9E95_22695 NZ_PYJW01000188.1 Protein Homology CDS 48494 49153 . - 0 ID=cds-WP_000268444.1;Parent=gene-C9E95_RS22150;Dbxref=GenBank:WP_000268444.1;Name=WP_000268444.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462077.1;locus_tag=C9E95_RS22150;product=DedA family general envelope maintenance protein YghB;protein_id=WP_000268444.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 49293 50480 . - . ID=gene-C9E95_RS22155;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=C9E95_RS22155;old_locus_tag=C9E95_22700 NZ_PYJW01000188.1 Protein Homology CDS 49293 50480 . - 0 ID=cds-WP_061375886.1;Parent=gene-C9E95_RS22155;Dbxref=GenBank:WP_061375886.1;Name=WP_061375886.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462076.1;locus_tag=C9E95_RS22155;product=cystathionine beta-lyase;protein_id=WP_061375886.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 50732 51466 . + . ID=gene-C9E95_RS22160;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=C9E95_RS22160;old_locus_tag=C9E95_22710 NZ_PYJW01000188.1 Protein Homology CDS 50732 51466 . + 0 ID=cds-WP_000527862.1;Parent=gene-C9E95_RS22160;Dbxref=GenBank:WP_000527862.1;Name=WP_000527862.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462074.1;locus_tag=C9E95_RS22160;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_000527862.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 51473 51898 . + . ID=gene-C9E95_RS22165;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=C9E95_RS22165;old_locus_tag=C9E95_22715 NZ_PYJW01000188.1 Protein Homology CDS 51473 51898 . + 0 ID=cds-WP_001251476.1;Parent=gene-C9E95_RS22165;Dbxref=GenBank:WP_001251476.1;Name=WP_001251476.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462073.1;locus_tag=C9E95_RS22165;product=TonB system transport protein ExbD;protein_id=WP_001251476.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 52011 52895 . - . ID=gene-C9E95_RS22170;Name=C9E95_RS22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22170;old_locus_tag=C9E95_22720 NZ_PYJW01000188.1 Protein Homology CDS 52011 52895 . - 0 ID=cds-WP_000019032.1;Parent=gene-C9E95_RS22170;Dbxref=GenBank:WP_000019032.1;Name=WP_000019032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462072.1;locus_tag=C9E95_RS22170;product=SDR family oxidoreductase;protein_id=WP_000019032.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 53019 53423 . - . ID=gene-C9E95_RS22175;Name=C9E95_RS22175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22175;old_locus_tag=C9E95_22725 NZ_PYJW01000188.1 Protein Homology CDS 53019 53423 . - 0 ID=cds-WP_000665654.1;Parent=gene-C9E95_RS22175;Dbxref=GenBank:WP_000665654.1;Name=WP_000665654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462071.1;locus_tag=C9E95_RS22175;product=hypothetical protein;protein_id=WP_000665654.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 53410 53820 . - . ID=gene-C9E95_RS22180;Name=C9E95_RS22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22180;old_locus_tag=C9E95_22730 NZ_PYJW01000188.1 Protein Homology CDS 53410 53820 . - 0 ID=cds-WP_000936449.1;Parent=gene-C9E95_RS22180;Dbxref=GenBank:WP_000936449.1;Name=WP_000936449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462070.1;locus_tag=C9E95_RS22180;product=hypothetical protein;protein_id=WP_000936449.1;transl_table=11 NZ_PYJW01000188.1 RefSeq gene 53924 54427 . + . ID=gene-C9E95_RS22185;Name=C9E95_RS22185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22185;old_locus_tag=C9E95_22735 NZ_PYJW01000188.1 Protein Homology CDS 53924 54427 . + 0 ID=cds-WP_001534190.1;Parent=gene-C9E95_RS22185;Dbxref=GenBank:WP_001534190.1;Name=WP_001534190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441059.1;locus_tag=C9E95_RS22185;product=ESA_00282 family adhesion-associated protein;protein_id=WP_001534190.1;transl_table=11 ##sequence-region NZ_PYJW01000039.1 1 864 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000039.1 RefSeq region 1 864 . + . ID=NZ_PYJW01000039.1:1..864;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000039.1 RefSeq gene 29 864 . - . ID=gene-C9E95_RS02825;Name=C9E95_RS02825;end_range=864,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02825;old_locus_tag=C9E95_02870;partial=true NZ_PYJW01000039.1 Protein Homology CDS 29 864 . - 2 ID=cds-WP_135369810.1;Parent=gene-C9E95_RS02825;Dbxref=GenBank:WP_135369810.1;Name=WP_135369810.1;end_range=864,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9E95_RS02825;partial=true;product=biotin/lipoyl-containing protein;protein_id=WP_135369810.1;transl_table=11 ##sequence-region NZ_PYJW01000170.1 1 54238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000170.1 RefSeq region 1 54238 . + . ID=NZ_PYJW01000170.1:1..54238;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000170.1 RefSeq gene 1 392 . + . ID=gene-C9E95_RS20065;Name=C9E95_RS20065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20065;old_locus_tag=C9E95_20550;partial=true;start_range=.,1 NZ_PYJW01000170.1 Protein Homology CDS 1 392 . + 2 ID=cds-WP_135369880.1;Parent=gene-C9E95_RS20065;Dbxref=GenBank:WP_135369880.1;Name=WP_135369880.1;Ontology_term=GO:0006814,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462261.1;locus_tag=C9E95_RS20065;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_135369880.1;start_range=.,1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 511 1209 . + . ID=gene-C9E95_RS20070;Name=C9E95_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20070;old_locus_tag=C9E95_20555 NZ_PYJW01000170.1 Protein Homology CDS 511 1209 . + 0 ID=cds-WP_135369881.1;Parent=gene-C9E95_RS20070;Dbxref=GenBank:WP_135369881.1;Name=WP_135369881.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459748.1;locus_tag=C9E95_RS20070;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_135369881.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 1589 2668 . + . ID=gene-C9E95_RS20075;Name=C9E95_RS20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20075;old_locus_tag=C9E95_20560 NZ_PYJW01000170.1 Protein Homology CDS 1589 2668 . + 0 ID=cds-WP_023244999.1;Parent=gene-C9E95_RS20075;Dbxref=GenBank:WP_023244999.1;Name=WP_023244999.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459749.1;locus_tag=C9E95_RS20075;product=FecCD family ABC transporter permease;protein_id=WP_023244999.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 2668 3444 . + . ID=gene-C9E95_RS20080;Name=C9E95_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20080;old_locus_tag=C9E95_20565 NZ_PYJW01000170.1 Protein Homology CDS 2668 3444 . + 0 ID=cds-WP_023994044.1;Parent=gene-C9E95_RS20080;Dbxref=GenBank:WP_023994044.1;Name=WP_023994044.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459750.1;locus_tag=C9E95_RS20080;product=ABC transporter ATP-binding protein;protein_id=WP_023994044.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 3535 4287 . - . ID=gene-C9E95_RS20085;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=C9E95_RS20085;old_locus_tag=C9E95_20570 NZ_PYJW01000170.1 Protein Homology CDS 3535 4287 . - 0 ID=cds-WP_000301554.1;Parent=gene-C9E95_RS20085;Dbxref=GenBank:WP_000301554.1;Name=WP_000301554.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=C9E95_RS20085;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_000301554.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 4511 5551 . - . ID=gene-C9E95_RS20090;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=C9E95_RS20090;old_locus_tag=C9E95_20580 NZ_PYJW01000170.1 Protein Homology CDS 4511 5551 . - 0 ID=cds-WP_000931428.1;Parent=gene-C9E95_RS20090;Dbxref=GenBank:WP_000931428.1;Name=WP_000931428.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459752.1;locus_tag=C9E95_RS20090;product=galactose-1-epimerase;protein_id=WP_000931428.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 5545 6693 . - . ID=gene-C9E95_RS20095;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=C9E95_RS20095;old_locus_tag=C9E95_20585 NZ_PYJW01000170.1 Protein Homology CDS 5545 6693 . - 0 ID=cds-WP_023195255.1;Parent=gene-C9E95_RS20095;Dbxref=GenBank:WP_023195255.1;Name=WP_023195255.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=C9E95_RS20095;product=galactokinase;protein_id=WP_023195255.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 6696 7742 . - . ID=gene-C9E95_RS20100;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=C9E95_RS20100;old_locus_tag=C9E95_20590 NZ_PYJW01000170.1 Protein Homology CDS 6696 7742 . - 0 ID=cds-WP_000187471.1;Parent=gene-C9E95_RS20100;Dbxref=GenBank:WP_000187471.1;Name=WP_000187471.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459754.1;locus_tag=C9E95_RS20100;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_000187471.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 7753 8769 . - . ID=gene-C9E95_RS20105;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=C9E95_RS20105;old_locus_tag=C9E95_20595 NZ_PYJW01000170.1 Protein Homology CDS 7753 8769 . - 0 ID=cds-WP_001265465.1;Parent=gene-C9E95_RS20105;Dbxref=GenBank:WP_001265465.1;Name=WP_001265465.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459755.1;locus_tag=C9E95_RS20105;product=UDP-glucose 4-epimerase GalE;protein_id=WP_001265465.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 8992 9900 . - . ID=gene-C9E95_RS20110;Name=C9E95_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20110;old_locus_tag=C9E95_20600 NZ_PYJW01000170.1 Protein Homology CDS 8992 9900 . - 0 ID=cds-WP_000885519.1;Parent=gene-C9E95_RS20110;Dbxref=GenBank:WP_000885519.1;Name=WP_000885519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459756.1;locus_tag=C9E95_RS20110;product=DUF2167 domain-containing protein;protein_id=WP_000885519.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 10071 11546 . - . ID=gene-C9E95_RS20115;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=C9E95_RS20115;old_locus_tag=C9E95_20605 NZ_PYJW01000170.1 Protein Homology CDS 10071 11546 . - 0 ID=cds-WP_000096941.1;Parent=gene-C9E95_RS20115;Dbxref=GenBank:WP_000096941.1;Name=WP_000096941.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459757.1;locus_tag=C9E95_RS20115;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_000096941.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 11614 12402 . - . ID=gene-C9E95_RS20120;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=C9E95_RS20120;old_locus_tag=C9E95_20610 NZ_PYJW01000170.1 Protein Homology CDS 11614 12402 . - 0 ID=cds-WP_001147413.1;Parent=gene-C9E95_RS20120;Dbxref=GenBank:WP_001147413.1;Name=WP_001147413.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459758.1;locus_tag=C9E95_RS20120;product=molybdenum-dependent transcriptional regulator;protein_id=WP_001147413.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 12531 12680 . + . ID=gene-C9E95_RS20125;Name=C9E95_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20125;old_locus_tag=C9E95_20615 NZ_PYJW01000170.1 Protein Homology CDS 12531 12680 . + 0 ID=cds-WP_000891513.1;Parent=gene-C9E95_RS20125;Dbxref=GenBank:WP_000891513.1;Name=WP_000891513.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459759.1;locus_tag=C9E95_RS20125;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WP_000891513.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 12847 13620 . + . ID=gene-C9E95_RS20130;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=C9E95_RS20130;old_locus_tag=C9E95_20620 NZ_PYJW01000170.1 Protein Homology CDS 12847 13620 . + 0 ID=cds-WP_000951408.1;Parent=gene-C9E95_RS20130;Dbxref=GenBank:WP_000951408.1;Name=WP_000951408.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459760.1;locus_tag=C9E95_RS20130;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_000951408.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 13620 14309 . + . ID=gene-C9E95_RS20135;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=C9E95_RS20135;old_locus_tag=C9E95_20625 NZ_PYJW01000170.1 Protein Homology CDS 13620 14309 . + 0 ID=cds-WP_000604026.1;Parent=gene-C9E95_RS20135;Dbxref=GenBank:WP_000604026.1;Name=WP_000604026.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459761.1;locus_tag=C9E95_RS20135;product=molybdate ABC transporter permease subunit;protein_id=WP_000604026.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 14312 15370 . + . ID=gene-C9E95_RS20140;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=C9E95_RS20140;old_locus_tag=C9E95_20630 NZ_PYJW01000170.1 Protein Homology CDS 14312 15370 . + 0 ID=cds-WP_000891715.1;Parent=gene-C9E95_RS20140;Dbxref=GenBank:WP_000891715.1;Name=WP_000891715.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459762.1;locus_tag=C9E95_RS20140;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_000891715.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 15371 16189 . - . ID=gene-C9E95_RS20145;Name=C9E95_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20145;old_locus_tag=C9E95_20635 NZ_PYJW01000170.1 Protein Homology CDS 15371 16189 . - 0 ID=cds-WP_000127031.1;Parent=gene-C9E95_RS20145;Dbxref=GenBank:WP_000127031.1;Name=WP_000127031.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459763.1;locus_tag=C9E95_RS20145;product=pyridoxal phosphatase;protein_id=WP_000127031.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 16353 17348 . + . ID=gene-C9E95_RS20150;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;gene_synonym=ybhE;locus_tag=C9E95_RS20150;old_locus_tag=C9E95_20640 NZ_PYJW01000170.1 Protein Homology CDS 16353 17348 . + 0 ID=cds-WP_000815468.1;Parent=gene-C9E95_RS20150;Dbxref=GenBank:WP_000815468.1;Name=WP_000815468.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459764.1;locus_tag=C9E95_RS20150;product=6-phosphogluconolactonase;protein_id=WP_000815468.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 17492 18775 . - . ID=gene-C9E95_RS20155;Name=C9E95_RS20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20155;old_locus_tag=C9E95_20645 NZ_PYJW01000170.1 Protein Homology CDS 17492 18775 . - 0 ID=cds-WP_001094776.1;Parent=gene-C9E95_RS20155;Dbxref=GenBank:WP_001094776.1;Name=WP_001094776.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459765.1;locus_tag=C9E95_RS20155;product=putative acyl-CoA thioester hydrolase;protein_id=WP_001094776.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 19013 20236 . + . ID=gene-C9E95_RS20160;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=C9E95_RS20160;old_locus_tag=C9E95_20650 NZ_PYJW01000170.1 Protein Homology CDS 19013 20236 . + 0 ID=cds-WP_080204048.1;Parent=gene-C9E95_RS20160;Dbxref=GenBank:WP_080204048.1;Name=WP_080204048.1;Ontology_term=GO:0019556,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459766.1;locus_tag=C9E95_RS20160;product=imidazolonepropionase;protein_id=WP_080204048.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 20233 21174 . + . ID=gene-C9E95_RS20165;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=C9E95_RS20165;old_locus_tag=C9E95_20655 NZ_PYJW01000170.1 Protein Homology CDS 20233 21174 . + 0 ID=cds-WP_000195688.1;Parent=gene-C9E95_RS20165;Dbxref=GenBank:WP_000195688.1;Name=WP_000195688.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459767.1;locus_tag=C9E95_RS20165;product=formimidoylglutamase;protein_id=WP_000195688.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 21219 21944 . + . ID=gene-C9E95_RS20170;Name=C9E95_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20170;old_locus_tag=C9E95_20660 NZ_PYJW01000170.1 Protein Homology CDS 21219 21944 . + 0 ID=cds-WP_000287413.1;Parent=gene-C9E95_RS20170;Dbxref=GenBank:WP_000287413.1;Name=WP_000287413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459768.1;locus_tag=C9E95_RS20170;product=histidine utilization repressor;protein_id=WP_000287413.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 22141 23826 . + . ID=gene-C9E95_RS20175;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=C9E95_RS20175;old_locus_tag=C9E95_20665 NZ_PYJW01000170.1 Protein Homology CDS 22141 23826 . + 0 ID=cds-WP_001115209.1;Parent=gene-C9E95_RS20175;Dbxref=GenBank:WP_001115209.1;Name=WP_001115209.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441920.1;locus_tag=C9E95_RS20175;product=urocanate hydratase;protein_id=WP_001115209.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 23828 25348 . + . ID=gene-C9E95_RS20180;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=C9E95_RS20180;old_locus_tag=C9E95_20670 NZ_PYJW01000170.1 Protein Homology CDS 23828 25348 . + 0 ID=cds-WP_080204049.1;Parent=gene-C9E95_RS20180;Dbxref=GenBank:WP_080204049.1;Name=WP_080204049.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459769.1;locus_tag=C9E95_RS20180;product=histidine ammonia-lyase;protein_id=WP_080204049.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 25433 25909 . - . ID=gene-C9E95_RS20185;Name=C9E95_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20185;old_locus_tag=C9E95_20675 NZ_PYJW01000170.1 Protein Homology CDS 25433 25909 . - 0 ID=cds-WP_000767403.1;Parent=gene-C9E95_RS20185;Dbxref=GenBank:WP_000767403.1;Name=WP_000767403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459770.1;locus_tag=C9E95_RS20185;product=kinase inhibitor;protein_id=WP_000767403.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 25967 27256 . - . ID=gene-C9E95_RS20190;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=C9E95_RS20190;old_locus_tag=C9E95_20680 NZ_PYJW01000170.1 Protein Homology CDS 25967 27256 . - 0 ID=cds-WP_000205503.1;Parent=gene-C9E95_RS20190;Dbxref=GenBank:WP_000205503.1;Name=WP_000205503.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459771.1;locus_tag=C9E95_RS20190;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_000205503.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 27343 28383 . + . ID=gene-C9E95_RS20195;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=C9E95_RS20195;old_locus_tag=C9E95_20685 NZ_PYJW01000170.1 Protein Homology CDS 27343 28383 . + 0 ID=cds-WP_000090729.1;Parent=gene-C9E95_RS20195;Dbxref=GenBank:WP_000090729.1;Name=WP_000090729.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459772.1;locus_tag=C9E95_RS20195;product=biotin synthase BioB;protein_id=WP_000090729.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 28380 29537 . + . ID=gene-C9E95_RS20200;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=C9E95_RS20200;old_locus_tag=C9E95_20690 NZ_PYJW01000170.1 Protein Homology CDS 28380 29537 . + 0 ID=cds-WP_023994035.1;Parent=gene-C9E95_RS20200;Dbxref=GenBank:WP_023994035.1;Name=WP_023994035.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459773.1;locus_tag=C9E95_RS20200;product=8-amino-7-oxononanoate synthase;protein_id=WP_023994035.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 29521 30276 . + . ID=gene-C9E95_RS20205;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=C9E95_RS20205;old_locus_tag=C9E95_20695 NZ_PYJW01000170.1 Protein Homology CDS 29521 30276 . + 0 ID=cds-WP_000079914.1;Parent=gene-C9E95_RS20205;Dbxref=GenBank:WP_000079914.1;Name=WP_000079914.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459774.1;locus_tag=C9E95_RS20205;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_000079914.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 30269 30955 . + . ID=gene-C9E95_RS20210;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=C9E95_RS20210;old_locus_tag=C9E95_20700 NZ_PYJW01000170.1 Protein Homology CDS 30269 30955 . + 0 ID=cds-WP_001616933.1;Parent=gene-C9E95_RS20210;Dbxref=GenBank:WP_001616933.1;Name=WP_001616933.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459775.1;locus_tag=C9E95_RS20210;product=dethiobiotin synthase;protein_id=WP_001616933.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 31606 33627 . + . ID=gene-C9E95_RS20220;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=C9E95_RS20220;old_locus_tag=C9E95_20710 NZ_PYJW01000170.1 Protein Homology CDS 31606 33627 . + 0 ID=cds-WP_000042502.1;Parent=gene-C9E95_RS20220;Dbxref=GenBank:WP_000042502.1;Name=WP_000042502.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=C9E95_RS20220;product=excinuclease ABC subunit UvrB;protein_id=WP_000042502.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 33936 34109 . + . ID=gene-C9E95_RS20225;Name=C9E95_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20225;old_locus_tag=C9E95_20715 NZ_PYJW01000170.1 Protein Homology CDS 33936 34109 . + 0 ID=cds-WP_001616936.1;Parent=gene-C9E95_RS20225;Dbxref=GenBank:WP_001616936.1;Name=WP_001616936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447236.1;locus_tag=C9E95_RS20225;product=hypothetical protein;protein_id=WP_001616936.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 34117 36414 . + . ID=gene-C9E95_RS20230;Name=slrP;gbkey=Gene;gene=slrP;gene_biotype=protein_coding;locus_tag=C9E95_RS20230;old_locus_tag=C9E95_20720 NZ_PYJW01000170.1 Protein Homology CDS 34117 36414 . + 0 ID=cds-WP_080204050.1;Parent=gene-C9E95_RS20230;Dbxref=GenBank:WP_080204050.1;Name=WP_080204050.1;gbkey=CDS;gene=slrP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459778.1;locus_tag=C9E95_RS20230;product=SPI-1 type III secretion system effector E3 ubiquitin transferase SlrP;protein_id=WP_080204050.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 36506 37414 . - . ID=gene-C9E95_RS20235;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=C9E95_RS20235;old_locus_tag=C9E95_20725 NZ_PYJW01000170.1 Protein Homology CDS 36506 37414 . - 0 ID=cds-WP_001246033.1;Parent=gene-C9E95_RS20235;Dbxref=GenBank:WP_001246033.1;Name=WP_001246033.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459779.1;locus_tag=C9E95_RS20235;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_001246033.1;transl_table=11 NZ_PYJW01000170.1 cmsearch riboswitch 37679 37823 . + . ID=id-NZ_PYJW01000170.1:37679..37823;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PYJW01000170.1 RefSeq gene 37811 38800 . + . ID=gene-C9E95_RS20240;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=C9E95_RS20240;old_locus_tag=C9E95_20730 NZ_PYJW01000170.1 Protein Homology CDS 37811 38800 . + 0 ID=cds-WP_000168181.1;Parent=gene-C9E95_RS20240;Dbxref=GenBank:WP_000168181.1;Name=WP_000168181.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459780.1;locus_tag=C9E95_RS20240;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_000168181.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 38822 39334 . + . ID=gene-C9E95_RS20245;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=C9E95_RS20245;old_locus_tag=C9E95_20735 NZ_PYJW01000170.1 Protein Homology CDS 38822 39334 . + 0 ID=cds-WP_000084604.1;Parent=gene-C9E95_RS20245;Dbxref=GenBank:WP_000084604.1;Name=WP_000084604.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=C9E95_RS20245;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_000084604.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 39337 39822 . + . ID=gene-C9E95_RS20250;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=C9E95_RS20250;old_locus_tag=C9E95_20740 NZ_PYJW01000170.1 Protein Homology CDS 39337 39822 . + 0 ID=cds-WP_000080894.1;Parent=gene-C9E95_RS20250;Dbxref=GenBank:WP_000080894.1;Name=WP_000080894.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459782.1;locus_tag=C9E95_RS20250;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_000080894.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 39815 40060 . + . ID=gene-C9E95_RS20255;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=C9E95_RS20255;old_locus_tag=C9E95_20745 NZ_PYJW01000170.1 Protein Homology CDS 39815 40060 . + 0 ID=cds-WP_000598596.1;Parent=gene-C9E95_RS20255;Dbxref=GenBank:WP_000598596.1;Name=WP_000598596.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308889.1;locus_tag=C9E95_RS20255;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_000598596.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 40062 40514 . + . ID=gene-C9E95_RS20260;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=C9E95_RS20260;old_locus_tag=C9E95_20750 NZ_PYJW01000170.1 Protein Homology CDS 40062 40514 . + 0 ID=cds-WP_000545202.1;Parent=gene-C9E95_RS20260;Dbxref=GenBank:WP_000545202.1;Name=WP_000545202.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459784.1;locus_tag=C9E95_RS20260;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_000545202.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 40562 41266 . + . ID=gene-C9E95_RS20265;Name=C9E95_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20265;old_locus_tag=C9E95_20755 NZ_PYJW01000170.1 Protein Homology CDS 40562 41266 . + 0 ID=cds-WP_000373611.1;Parent=gene-C9E95_RS20265;Dbxref=GenBank:WP_000373611.1;Name=WP_000373611.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459785.1;locus_tag=C9E95_RS20265;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000373611.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 41412 42119 . + . ID=gene-C9E95_RS20270;Name=C9E95_RS20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20270;old_locus_tag=C9E95_20765 NZ_PYJW01000170.1 Protein Homology CDS 41412 42119 . + 0 ID=cds-WP_023994327.1;Parent=gene-C9E95_RS20270;Dbxref=GenBank:WP_023994327.1;Name=WP_023994327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459786.1;locus_tag=C9E95_RS20270;product=Bax inhibitor-1 family protein;protein_id=WP_023994327.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 42143 42751 . + . ID=gene-C9E95_RS20275;Name=C9E95_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20275;old_locus_tag=C9E95_20770 NZ_PYJW01000170.1 Protein Homology CDS 42143 42751 . + 0 ID=cds-WP_023994328.1;Parent=gene-C9E95_RS20275;Dbxref=GenBank:WP_023994328.1;Name=WP_023994328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459787.1;locus_tag=C9E95_RS20275;product=hypothetical protein;protein_id=WP_023994328.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 42759 43319 . + . ID=gene-C9E95_RS20280;Name=C9E95_RS20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20280;old_locus_tag=C9E95_20775 NZ_PYJW01000170.1 Protein Homology CDS 42759 43319 . + 0 ID=cds-WP_001052196.1;Parent=gene-C9E95_RS20280;Dbxref=GenBank:WP_001052196.1;Name=WP_001052196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459788.1;locus_tag=C9E95_RS20280;product=hypothetical protein;protein_id=WP_001052196.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 43322 44284 . - . ID=gene-C9E95_RS20285;Name=C9E95_RS20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20285;old_locus_tag=C9E95_20780 NZ_PYJW01000170.1 Protein Homology CDS 43322 44284 . - 0 ID=cds-WP_023994031.1;Parent=gene-C9E95_RS20285;Dbxref=GenBank:WP_023994031.1;Name=WP_023994031.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459789.1;locus_tag=C9E95_RS20285;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;protein_id=WP_023994031.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 44284 45525 . - . ID=gene-C9E95_RS20290;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=C9E95_RS20290;old_locus_tag=C9E95_20785 NZ_PYJW01000170.1 Protein Homology CDS 44284 45525 . - 0 ID=cds-WP_023994030.1;Parent=gene-C9E95_RS20290;Dbxref=GenBank:WP_023994030.1;Name=WP_023994030.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459790.1;locus_tag=C9E95_RS20290;product=cardiolipin synthase ClsB;protein_id=WP_023994030.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 45522 46280 . - . ID=gene-C9E95_RS20295;Name=C9E95_RS20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20295;old_locus_tag=C9E95_20790 NZ_PYJW01000170.1 Protein Homology CDS 45522 46280 . - 0 ID=cds-WP_000192039.1;Parent=gene-C9E95_RS20295;Dbxref=GenBank:WP_000192039.1;Name=WP_000192039.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459791.1;locus_tag=C9E95_RS20295;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_000192039.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 46413 46823 . + . ID=gene-C9E95_RS20300;Name=C9E95_RS20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20300;old_locus_tag=C9E95_20795 NZ_PYJW01000170.1 Protein Homology CDS 46413 46823 . + 0 ID=cds-WP_000871970.1;Parent=gene-C9E95_RS20300;Dbxref=GenBank:WP_000871970.1;Name=WP_000871970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459792.1;locus_tag=C9E95_RS20300;product=YbhQ family protein;protein_id=WP_000871970.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 46785 47891 . - . ID=gene-C9E95_RS20305;Name=C9E95_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20305;old_locus_tag=C9E95_20800 NZ_PYJW01000170.1 Protein Homology CDS 46785 47891 . - 0 ID=cds-WP_000469050.1;Parent=gene-C9E95_RS20305;Dbxref=GenBank:WP_000469050.1;Name=WP_000469050.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459793.1;locus_tag=C9E95_RS20305;product=ABC transporter permease;protein_id=WP_000469050.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 48007 49137 . - . ID=gene-C9E95_RS20310;Name=C9E95_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20310;old_locus_tag=C9E95_20805 NZ_PYJW01000170.1 Protein Homology CDS 48007 49137 . - 0 ID=cds-WP_000045765.1;Parent=gene-C9E95_RS20310;Dbxref=GenBank:WP_000045765.1;Name=WP_000045765.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459794.1;locus_tag=C9E95_RS20310;product=ABC transporter permease;protein_id=WP_000045765.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 49130 50866 . - . ID=gene-C9E95_RS20315;Name=C9E95_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20315;old_locus_tag=C9E95_20810 NZ_PYJW01000170.1 Protein Homology CDS 49130 50866 . - 0 ID=cds-WP_080204051.1;Parent=gene-C9E95_RS20315;Dbxref=GenBank:WP_080204051.1;Name=WP_080204051.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459795.1;locus_tag=C9E95_RS20315;product=ATP-binding cassette domain-containing protein;protein_id=WP_080204051.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 50859 51854 . - . ID=gene-C9E95_RS20320;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=C9E95_RS20320;old_locus_tag=C9E95_20815 NZ_PYJW01000170.1 Protein Homology CDS 50859 51854 . - 0 ID=cds-WP_000743436.1;Parent=gene-C9E95_RS20320;Dbxref=GenBank:WP_000743436.1;Name=WP_000743436.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459796.1;locus_tag=C9E95_RS20320;product=secretion protein HlyD;protein_id=WP_000743436.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 51854 52528 . - . ID=gene-C9E95_RS20325;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=C9E95_RS20325;old_locus_tag=C9E95_20820 NZ_PYJW01000170.1 Protein Homology CDS 51854 52528 . - 0 ID=cds-WP_020898574.1;Parent=gene-C9E95_RS20325;Dbxref=GenBank:WP_020898574.1;Name=WP_020898574.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459797.1;locus_tag=C9E95_RS20325;product=transcriptional regulator CecR;protein_id=WP_020898574.1;transl_table=11 NZ_PYJW01000170.1 RefSeq gene 52758 54122 . + . ID=gene-C9E95_RS20330;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=C9E95_RS20330;old_locus_tag=C9E95_20825 NZ_PYJW01000170.1 Protein Homology CDS 52758 54122 . + 0 ID=cds-WP_023243507.1;Parent=gene-C9E95_RS20330;Dbxref=GenBank:WP_023243507.1;Name=WP_023243507.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459798.1;locus_tag=C9E95_RS20330;product=ATP-dependent RNA helicase RhlE;protein_id=WP_023243507.1;transl_table=11 ##sequence-region NZ_PYJW01000021.1 1 255 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000021.1 RefSeq region 1 255 . + . ID=NZ_PYJW01000021.1:1..255;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica ##sequence-region NZ_PYJW01000146.1 1 54034 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000146.1 RefSeq region 1 54034 . + . ID=NZ_PYJW01000146.1:1..54034;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000146.1 RefSeq gene 437 790 . - . ID=gene-C9E95_RS17705;Name=C9E95_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17705;old_locus_tag=C9E95_18140 NZ_PYJW01000146.1 Protein Homology CDS 437 790 . - 0 ID=cds-WP_000722368.1;Parent=gene-C9E95_RS17705;Dbxref=GenBank:WP_000722368.1;Name=WP_000722368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460830.1;locus_tag=C9E95_RS17705;product=YebY family protein;protein_id=WP_000722368.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 807 1682 . - . ID=gene-C9E95_RS17710;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=C9E95_RS17710;old_locus_tag=C9E95_18145 NZ_PYJW01000146.1 Protein Homology CDS 807 1682 . - 0 ID=cds-WP_000979694.1;Parent=gene-C9E95_RS17710;Dbxref=GenBank:WP_000979694.1;Name=WP_000979694.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460831.1;locus_tag=C9E95_RS17710;product=copper homeostasis membrane protein CopD;protein_id=WP_000979694.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 1683 2057 . - . ID=gene-C9E95_RS17715;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=C9E95_RS17715;old_locus_tag=C9E95_18150 NZ_PYJW01000146.1 Protein Homology CDS 1683 2057 . - 0 ID=cds-WP_000168393.1;Parent=gene-C9E95_RS17715;Dbxref=GenBank:WP_000168393.1;Name=WP_000168393.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460832.1;locus_tag=C9E95_RS17715;product=CopC domain-containing protein YobA;protein_id=WP_000168393.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 2195 2425 . + . ID=gene-C9E95_RS17720;Name=C9E95_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17720;old_locus_tag=C9E95_18155 NZ_PYJW01000146.1 Protein Homology CDS 2195 2425 . + 0 ID=cds-WP_000856224.1;Parent=gene-C9E95_RS17720;Dbxref=GenBank:WP_000856224.1;Name=WP_000856224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460833.1;locus_tag=C9E95_RS17720;product=DNA polymerase III subunit theta;protein_id=WP_000856224.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 2533 3189 . + . ID=gene-C9E95_RS17725;Name=C9E95_RS17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17725;old_locus_tag=C9E95_18160 NZ_PYJW01000146.1 Protein Homology CDS 2533 3189 . + 0 ID=cds-WP_000100256.1;Parent=gene-C9E95_RS17725;Dbxref=GenBank:WP_000100256.1;Name=WP_000100256.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460834.1;locus_tag=C9E95_RS17725;product=nitrilase-related carbon-nitrogen hydrolase;protein_id=WP_000100256.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 3213 3911 . + . ID=gene-C9E95_RS17730;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=C9E95_RS17730;old_locus_tag=C9E95_18165 NZ_PYJW01000146.1 Protein Homology CDS 3213 3911 . + 0 ID=cds-WP_000944278.1;Parent=gene-C9E95_RS17730;Dbxref=GenBank:WP_000944278.1;Name=WP_000944278.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460835.1;locus_tag=C9E95_RS17730;product=exodeoxyribonuclease X;protein_id=WP_000944278.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 3946 5997 . - . ID=gene-C9E95_RS17735;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=C9E95_RS17735;old_locus_tag=C9E95_18170 NZ_PYJW01000146.1 Protein Homology CDS 3946 5997 . - 0 ID=cds-WP_000936990.1;Parent=gene-C9E95_RS17735;Dbxref=GenBank:WP_000936990.1;Name=WP_000936990.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460836.1;locus_tag=C9E95_RS17735;product=oligopeptidase B;protein_id=WP_000936990.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 6211 6870 . - . ID=gene-C9E95_RS17740;Name=C9E95_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17740;old_locus_tag=C9E95_18175 NZ_PYJW01000146.1 Protein Homology CDS 6211 6870 . - 0 ID=cds-WP_000024707.1;Parent=gene-C9E95_RS17740;Dbxref=GenBank:WP_000024707.1;Name=WP_000024707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460837.1;locus_tag=C9E95_RS17740;product=tellurite resistance TerB family protein;protein_id=WP_000024707.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 6964 7317 . - . ID=gene-C9E95_RS17745;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=C9E95_RS17745;old_locus_tag=C9E95_18180 NZ_PYJW01000146.1 Protein Homology CDS 6964 7317 . - 0 ID=cds-WP_001042123.1;Parent=gene-C9E95_RS17745;Dbxref=GenBank:WP_001042123.1;Name=WP_001042123.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460838.1;locus_tag=C9E95_RS17745;product=protein YebF;protein_id=WP_001042123.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 7385 7675 . - . ID=gene-C9E95_RS17750;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=C9E95_RS17750;old_locus_tag=C9E95_18185 NZ_PYJW01000146.1 Protein Homology CDS 7385 7675 . - 0 ID=cds-WP_000257723.1;Parent=gene-C9E95_RS17750;Dbxref=GenBank:WP_000257723.1;Name=WP_000257723.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460839.1;locus_tag=C9E95_RS17750;product=DNA damage-inducible protein YebG;protein_id=WP_000257723.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 7806 8984 . + . ID=gene-C9E95_RS17755;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=C9E95_RS17755;old_locus_tag=C9E95_18190 NZ_PYJW01000146.1 Protein Homology CDS 7806 8984 . + 0 ID=cds-WP_063916965.1;Parent=gene-C9E95_RS17755;Dbxref=GenBank:WP_063916965.1;Name=WP_063916965.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460840.1;locus_tag=C9E95_RS17755;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_063916965.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 9084 9725 . - . ID=gene-C9E95_RS17760;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=C9E95_RS17760;old_locus_tag=C9E95_18195 NZ_PYJW01000146.1 Protein Homology CDS 9084 9725 . - 0 ID=cds-WP_000800494.1;Parent=gene-C9E95_RS17760;Dbxref=GenBank:WP_000800494.1;Name=WP_000800494.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460841.1;locus_tag=C9E95_RS17760;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000800494.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 9763 11574 . - . ID=gene-C9E95_RS17765;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=C9E95_RS17765;old_locus_tag=C9E95_18200 NZ_PYJW01000146.1 Protein Homology CDS 9763 11574 . - 0 ID=cds-WP_050376080.1;Parent=gene-C9E95_RS17765;Dbxref=GenBank:WP_050376080.1;Name=WP_050376080.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460842.1;locus_tag=C9E95_RS17765;product=phosphogluconate dehydratase;protein_id=WP_050376080.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 11809 13284 . - . ID=gene-C9E95_RS17770;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=C9E95_RS17770;old_locus_tag=C9E95_18205 NZ_PYJW01000146.1 Protein Homology CDS 11809 13284 . - 0 ID=cds-WP_000301711.1;Parent=gene-C9E95_RS17770;Dbxref=GenBank:WP_000301711.1;Name=WP_000301711.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=C9E95_RS17770;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000301711.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 13626 14495 . + . ID=gene-C9E95_RS17780;Name=C9E95_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17780;old_locus_tag=C9E95_18215 NZ_PYJW01000146.1 Protein Homology CDS 13626 14495 . + 0 ID=cds-WP_023194353.1;Parent=gene-C9E95_RS17780;Dbxref=GenBank:WP_023194353.1;Name=WP_023194353.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700,GO:0097367;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,carbohydrate derivative binding|0097367||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460844.1;locus_tag=C9E95_RS17780;product=MurR/RpiR family transcriptional regulator;protein_id=WP_023194353.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 14619 16061 . + . ID=gene-C9E95_RS17785;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=C9E95_RS17785;old_locus_tag=C9E95_18220 NZ_PYJW01000146.1 Protein Homology CDS 14619 16061 . + 0 ID=cds-WP_000091156.1;Parent=gene-C9E95_RS17785;Dbxref=GenBank:WP_000091156.1;Name=WP_000091156.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=C9E95_RS17785;product=pyruvate kinase;protein_id=WP_000091156.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 16134 17105 . - . ID=gene-C9E95_RS17790;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=C9E95_RS17790;old_locus_tag=C9E95_18225 NZ_PYJW01000146.1 Protein Homology CDS 16134 17105 . - 0 ID=cds-WP_000448401.1;Parent=gene-C9E95_RS17790;Dbxref=GenBank:WP_000448401.1;Name=WP_000448401.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460846.1;locus_tag=C9E95_RS17790;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_000448401.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 17222 18541 . - . ID=gene-C9E95_RS17795;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=C9E95_RS17795;old_locus_tag=C9E95_18235 NZ_PYJW01000146.1 Protein Homology CDS 17222 18541 . - 0 ID=cds-WP_001184028.1;Parent=gene-C9E95_RS17795;Dbxref=GenBank:WP_001184028.1;Name=WP_001184028.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=C9E95_RS17795;product=murein DD-endopeptidase MepM;protein_id=WP_001184028.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 18557 19501 . - . ID=gene-C9E95_RS17800;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=C9E95_RS17800;old_locus_tag=C9E95_18240 NZ_PYJW01000146.1 Protein Homology CDS 18557 19501 . - 0 ID=cds-WP_000939597.1;Parent=gene-C9E95_RS17800;Dbxref=GenBank:WP_000939597.1;Name=WP_000939597.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=C9E95_RS17800;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_000939597.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 19580 20335 . + . ID=gene-C9E95_RS17805;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=C9E95_RS17805;old_locus_tag=C9E95_18245 NZ_PYJW01000146.1 Protein Homology CDS 19580 20335 . + 0 ID=cds-WP_000203013.1;Parent=gene-C9E95_RS17805;Dbxref=GenBank:WP_000203013.1;Name=WP_000203013.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=C9E95_RS17805;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_000203013.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 20332 21117 . + . ID=gene-C9E95_RS17810;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=C9E95_RS17810;old_locus_tag=C9E95_18250 NZ_PYJW01000146.1 Protein Homology CDS 20332 21117 . + 0 ID=cds-WP_000571510.1;Parent=gene-C9E95_RS17810;Dbxref=GenBank:WP_000571510.1;Name=WP_000571510.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460850.1;locus_tag=C9E95_RS17810;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_000571510.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 21196 22206 . - . ID=gene-C9E95_RS17815;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=C9E95_RS17815;old_locus_tag=C9E95_18255 NZ_PYJW01000146.1 Protein Homology CDS 21196 22206 . - 0 ID=cds-WP_000568504.1;Parent=gene-C9E95_RS17815;Dbxref=GenBank:WP_000568504.1;Name=WP_000568504.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460851.1;locus_tag=C9E95_RS17815;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000568504.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 22215 22826 . - . ID=gene-C9E95_RS17820;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=C9E95_RS17820;old_locus_tag=C9E95_18260 NZ_PYJW01000146.1 Protein Homology CDS 22215 22826 . - 0 ID=cds-WP_000580335.1;Parent=gene-C9E95_RS17820;Dbxref=GenBank:WP_000580335.1;Name=WP_000580335.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=C9E95_RS17820;product=Holliday junction branch migration protein RuvA;protein_id=WP_000580335.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 23186 23878 . - . ID=gene-C9E95_RS17825;Name=C9E95_RS17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17825;old_locus_tag=C9E95_18265 NZ_PYJW01000146.1 Protein Homology CDS 23186 23878 . - 0 ID=cds-WP_167850625.1;Parent=gene-C9E95_RS17825;Dbxref=GenBank:WP_167850625.1;Name=WP_167850625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227317.1;locus_tag=C9E95_RS17825;product=hypothetical protein;protein_id=WP_167850625.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 24088 24687 . + . ID=gene-C9E95_RS17830;Name=C9E95_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17830;old_locus_tag=C9E95_18270 NZ_PYJW01000146.1 Protein Homology CDS 24088 24687 . + 0 ID=cds-WP_080219727.1;Parent=gene-C9E95_RS17830;Dbxref=GenBank:WP_080219727.1;Name=WP_080219727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460854.1;locus_tag=C9E95_RS17830;product=YebB family permuted papain-like enzyme;protein_id=WP_080219727.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 24689 25210 . - . ID=gene-C9E95_RS17835;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=C9E95_RS17835;old_locus_tag=C9E95_18275 NZ_PYJW01000146.1 Protein Homology CDS 24689 25210 . - 0 ID=cds-WP_080204004.1;Parent=gene-C9E95_RS17835;Dbxref=GenBank:WP_080204004.1;Name=WP_080204004.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=C9E95_RS17835;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_080204004.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 25247 25987 . - . ID=gene-C9E95_RS17840;Name=C9E95_RS17840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17840;old_locus_tag=C9E95_18280 NZ_PYJW01000146.1 Protein Homology CDS 25247 25987 . - 0 ID=cds-WP_000907242.1;Parent=gene-C9E95_RS17840;Dbxref=GenBank:WP_000907242.1;Name=WP_000907242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=C9E95_RS17840;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000907242.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 26017 26469 . - . ID=gene-C9E95_RS17845;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=C9E95_RS17845;old_locus_tag=C9E95_18285 NZ_PYJW01000146.1 Protein Homology CDS 26017 26469 . - 0 ID=cds-WP_000653693.1;Parent=gene-C9E95_RS17845;Dbxref=GenBank:WP_000653693.1;Name=WP_000653693.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460857.1;locus_tag=C9E95_RS17845;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_000653693.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 26563 28335 . - . ID=gene-C9E95_RS17850;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=C9E95_RS17850;old_locus_tag=C9E95_18290 NZ_PYJW01000146.1 Protein Homology CDS 26563 28335 . - 0 ID=cds-WP_001258629.1;Parent=gene-C9E95_RS17850;Dbxref=GenBank:WP_001258629.1;Name=WP_001258629.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460858.1;locus_tag=C9E95_RS17850;product=aspartate--tRNA ligase;protein_id=WP_001258629.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 28660 29226 . + . ID=gene-C9E95_RS17855;Name=C9E95_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17855;old_locus_tag=C9E95_18295 NZ_PYJW01000146.1 Protein Homology CDS 28660 29226 . + 0 ID=cds-WP_000916144.1;Parent=gene-C9E95_RS17855;Dbxref=GenBank:WP_000916144.1;Name=WP_000916144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460859.1;locus_tag=C9E95_RS17855;product=hydrolase;protein_id=WP_000916144.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 29223 30041 . + . ID=gene-C9E95_RS17860;Name=C9E95_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17860;old_locus_tag=C9E95_18300 NZ_PYJW01000146.1 Protein Homology CDS 29223 30041 . + 0 ID=cds-WP_000639226.1;Parent=gene-C9E95_RS17860;Dbxref=GenBank:WP_000639226.1;Name=WP_000639226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460860.1;locus_tag=C9E95_RS17860;product=DUF72 domain-containing protein;protein_id=WP_000639226.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 30094 30489 . + . ID=gene-C9E95_RS17865;Name=C9E95_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17865;old_locus_tag=C9E95_18305 NZ_PYJW01000146.1 Protein Homology CDS 30094 30489 . + 0 ID=cds-WP_000252975.1;Parent=gene-C9E95_RS17865;Dbxref=GenBank:WP_000252975.1;Name=WP_000252975.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460861.1;locus_tag=C9E95_RS17865;product=MAPEG family protein;protein_id=WP_000252975.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 30530 31273 . + . ID=gene-C9E95_RS17870;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=C9E95_RS17870;old_locus_tag=C9E95_18310 NZ_PYJW01000146.1 Protein Homology CDS 30530 31273 . + 0 ID=cds-WP_000019607.1;Parent=gene-C9E95_RS17870;Dbxref=GenBank:WP_000019607.1;Name=WP_000019607.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460862.1;locus_tag=C9E95_RS17870;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_000019607.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 31270 32241 . + . ID=gene-C9E95_RS17875;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=C9E95_RS17875;old_locus_tag=C9E95_18315 NZ_PYJW01000146.1 Protein Homology CDS 31270 32241 . + 0 ID=cds-WP_000569026.1;Parent=gene-C9E95_RS17875;Dbxref=GenBank:WP_000569026.1;Name=WP_000569026.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460863.1;locus_tag=C9E95_RS17875;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_000569026.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 32477 33223 . - . ID=gene-C9E95_RS17880;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=C9E95_RS17880;old_locus_tag=C9E95_18325 NZ_PYJW01000146.1 Protein Homology CDS 32477 33223 . - 0 ID=cds-WP_080204005.1;Parent=gene-C9E95_RS17880;Dbxref=GenBank:WP_080204005.1;Name=WP_080204005.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460864.1;locus_tag=C9E95_RS17880;product=copper homeostasis protein CutC;protein_id=WP_080204005.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 33243 33812 . - . ID=gene-C9E95_RS17885;Name=C9E95_RS17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17885;old_locus_tag=C9E95_18330 NZ_PYJW01000146.1 Protein Homology CDS 33243 33812 . - 0 ID=cds-WP_000024794.1;Parent=gene-C9E95_RS17885;Dbxref=GenBank:WP_000024794.1;Name=WP_000024794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460865.1;locus_tag=C9E95_RS17885;product=VOC family protein;protein_id=WP_000024794.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 34049 35782 . + . ID=gene-C9E95_RS17890;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=C9E95_RS17890;old_locus_tag=C9E95_18335 NZ_PYJW01000146.1 Protein Homology CDS 34049 35782 . + 0 ID=cds-WP_001025366.1;Parent=gene-C9E95_RS17890;Dbxref=GenBank:WP_001025366.1;Name=WP_001025366.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=C9E95_RS17890;product=arginine--tRNA ligase;protein_id=WP_001025366.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 35971 37842 . + . ID=gene-C9E95_RS17895;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=C9E95_RS17895;old_locus_tag=C9E95_18340 NZ_PYJW01000146.1 Protein Homology CDS 35971 37842 . + 0 ID=cds-WP_080204006.1;Parent=gene-C9E95_RS17895;Dbxref=GenBank:WP_080204006.1;Name=WP_080204006.1;Ontology_term=GO:0009252,GO:0003824,GO:0008658,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=catalytic activity|0003824||IEA,penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460867.1;locus_tag=C9E95_RS17895;product=penicillin-binding protein 2;protein_id=WP_080204006.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 37896 39035 . - . ID=gene-C9E95_RS17900;Name=C9E95_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17900;old_locus_tag=C9E95_18345 NZ_PYJW01000146.1 Protein Homology CDS 37896 39035 . - 0 ID=cds-WP_000989908.1;Parent=gene-C9E95_RS17900;Dbxref=GenBank:WP_000989908.1;Name=WP_000989908.1;Ontology_term=GO:0005975,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=C9E95_RS17900;product=glycoside hydrolase family 88/105 protein;protein_id=WP_000989908.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 39272 39664 . - . ID=gene-C9E95_RS17905;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=C9E95_RS17905;old_locus_tag=C9E95_18350 NZ_PYJW01000146.1 Protein Homology CDS 39272 39664 . - 0 ID=cds-WP_001233619.1;Parent=gene-C9E95_RS17905;Dbxref=GenBank:WP_001233619.1;Name=WP_001233619.1;Ontology_term=GO:0044781;gbkey=CDS;gene=flhE;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460869.1;locus_tag=C9E95_RS17905;product=flagellar protein FlhE;protein_id=WP_001233619.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 39664 41742 . - . ID=gene-C9E95_RS17910;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=C9E95_RS17910;old_locus_tag=C9E95_18355 NZ_PYJW01000146.1 Protein Homology CDS 39664 41742 . - 0 ID=cds-WP_000002386.1;Parent=gene-C9E95_RS17910;Dbxref=GenBank:WP_000002386.1;Name=WP_000002386.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460870.1;locus_tag=C9E95_RS17910;product=flagellar biosynthesis protein FlhA;protein_id=WP_000002386.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 41735 42886 . - . ID=gene-C9E95_RS17915;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=C9E95_RS17915;old_locus_tag=C9E95_18360 NZ_PYJW01000146.1 Protein Homology CDS 41735 42886 . - 0 ID=cds-WP_079943109.1;Parent=gene-C9E95_RS17915;Dbxref=GenBank:WP_079943109.1;Name=WP_079943109.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460871.1;locus_tag=C9E95_RS17915;product=flagellar biosynthesis protein FlhB;protein_id=WP_079943109.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 43080 43724 . - . ID=gene-C9E95_RS17920;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=C9E95_RS17920;old_locus_tag=C9E95_18365 NZ_PYJW01000146.1 Protein Homology CDS 43080 43724 . - 0 ID=cds-WP_000983585.1;Parent=gene-C9E95_RS17920;Dbxref=GenBank:WP_000983585.1;Name=WP_000983585.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460872.1;locus_tag=C9E95_RS17920;product=protein phosphatase CheZ;protein_id=WP_000983585.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 43735 44124 . - . ID=gene-C9E95_RS17925;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=C9E95_RS17925;old_locus_tag=C9E95_18370 NZ_PYJW01000146.1 Protein Homology CDS 43735 44124 . - 0 ID=cds-WP_000763861.1;Parent=gene-C9E95_RS17925;Dbxref=GenBank:WP_000763861.1;Name=WP_000763861.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=C9E95_RS17925;product=chemotaxis response regulator CheY;protein_id=WP_000763861.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 44142 45191 . - . ID=gene-C9E95_RS17930;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=C9E95_RS17930;old_locus_tag=C9E95_18375 NZ_PYJW01000146.1 Protein Homology CDS 44142 45191 . - 0 ID=cds-WP_000036389.1;Parent=gene-C9E95_RS17930;Dbxref=GenBank:WP_000036389.1;Name=WP_000036389.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=C9E95_RS17930;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WP_000036389.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 45188 46054 . - . ID=gene-C9E95_RS17935;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=C9E95_RS17935;old_locus_tag=C9E95_18380 NZ_PYJW01000146.1 Protein Homology CDS 45188 46054 . - 0 ID=cds-WP_000204362.1;Parent=gene-C9E95_RS17935;Dbxref=GenBank:WP_000204362.1;Name=WP_000204362.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460875.1;locus_tag=C9E95_RS17935;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_000204362.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 46215 47876 . - . ID=gene-C9E95_RS17940;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=C9E95_RS17940;old_locus_tag=C9E95_18385 NZ_PYJW01000146.1 Protein Homology CDS 46215 47876 . - 0 ID=cds-WP_023993334.1;Parent=gene-C9E95_RS17940;Dbxref=GenBank:WP_023993334.1;Name=WP_023993334.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460876.1;locus_tag=C9E95_RS17940;product=methyl-accepting chemotaxis protein II;protein_id=WP_023993334.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 48113 48616 . - . ID=gene-C9E95_RS17945;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=C9E95_RS17945;old_locus_tag=C9E95_18390 NZ_PYJW01000146.1 Protein Homology CDS 48113 48616 . - 0 ID=cds-WP_000147295.1;Parent=gene-C9E95_RS17945;Dbxref=GenBank:WP_000147295.1;Name=WP_000147295.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460877.1;locus_tag=C9E95_RS17945;product=chemotaxis protein CheW;protein_id=WP_000147295.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 48637 50652 . - . ID=gene-C9E95_RS17950;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=C9E95_RS17950;old_locus_tag=C9E95_18395 NZ_PYJW01000146.1 Protein Homology CDS 48637 50652 . - 0 ID=cds-WP_000061301.1;Parent=gene-C9E95_RS17950;Dbxref=GenBank:WP_000061301.1;Name=WP_000061301.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460878.1;locus_tag=C9E95_RS17950;product=chemotaxis protein CheA;protein_id=WP_000061301.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 50657 51586 . - . ID=gene-C9E95_RS17955;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=C9E95_RS17955;old_locus_tag=C9E95_18400 NZ_PYJW01000146.1 Protein Homology CDS 50657 51586 . - 0 ID=cds-WP_000795653.1;Parent=gene-C9E95_RS17955;Dbxref=GenBank:WP_000795653.1;Name=WP_000795653.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460879.1;locus_tag=C9E95_RS17955;product=flagellar motor protein MotB;protein_id=WP_000795653.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 51583 52470 . - . ID=gene-C9E95_RS17960;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=C9E95_RS17960;old_locus_tag=C9E95_18405 NZ_PYJW01000146.1 Protein Homology CDS 51583 52470 . - 0 ID=cds-WP_000906312.1;Parent=gene-C9E95_RS17960;Dbxref=GenBank:WP_000906312.1;Name=WP_000906312.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460880.1;locus_tag=C9E95_RS17960;product=flagellar motor stator protein MotA;protein_id=WP_000906312.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 52596 53180 . - . ID=gene-C9E95_RS17965;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=C9E95_RS17965;old_locus_tag=C9E95_18410 NZ_PYJW01000146.1 Protein Homology CDS 52596 53180 . - 0 ID=cds-WP_000605987.1;Parent=gene-C9E95_RS17965;Dbxref=GenBank:WP_000605987.1;Name=WP_000605987.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460881.3;locus_tag=C9E95_RS17965;product=flagellar transcriptional regulator FlhC;protein_id=WP_000605987.1;transl_table=11 NZ_PYJW01000146.1 RefSeq gene 53177 53518 . - . ID=gene-C9E95_RS17970;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=C9E95_RS17970;old_locus_tag=C9E95_18415 NZ_PYJW01000146.1 Protein Homology CDS 53177 53518 . - 0 ID=cds-WP_001518146.1;Parent=gene-C9E95_RS17970;Dbxref=GenBank:WP_001518146.1;Name=WP_001518146.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310629.2;locus_tag=C9E95_RS17970;product=flagellar transcriptional regulator FlhD;protein_id=WP_001518146.1;transl_table=11 ##sequence-region NZ_PYJW01000001.1 1 253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000001.1 RefSeq region 1 253 . + . ID=NZ_PYJW01000001.1:1..253;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000001.1 RefSeq gene 86 172 . - . ID=gene-C9E95_RS00005;Name=C9E95_RS00005;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS00005;old_locus_tag=C9E95_00005 NZ_PYJW01000001.1 tRNAscan-SE tRNA 86 172 . - . ID=rna-C9E95_RS00005;Parent=gene-C9E95_RS00005;anticodon=(pos:complement(136..138));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS00005;product=tRNA-Leu NZ_PYJW01000001.1 tRNAscan-SE exon 86 172 . - . ID=exon-C9E95_RS00005-1;Parent=rna-C9E95_RS00005;anticodon=(pos:complement(136..138));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS00005;product=tRNA-Leu ##sequence-region NZ_PYJW01000124.1 1 833 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000124.1 RefSeq region 1 833 . + . ID=NZ_PYJW01000124.1:1..833;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000124.1 RefSeq gene 1 349 . - . ID=gene-C9E95_RS13410;Name=C9E95_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13410;old_locus_tag=C9E95_13750;partial=true;start_range=.,1 NZ_PYJW01000124.1 Protein Homology CDS 1 349 . - 0 ID=cds-WP_135369853.1;Parent=gene-C9E95_RS13410;Dbxref=GenBank:WP_135369853.1;Name=WP_135369853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000171103.1;locus_tag=C9E95_RS13410;partial=true;product=type IV secretion protein Rhs;protein_id=WP_135369853.1;start_range=.,1;transl_table=11 NZ_PYJW01000124.1 RefSeq gene 346 833 . - . ID=gene-C9E95_RS13415;Name=C9E95_RS13415;end_range=833,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13415;old_locus_tag=C9E95_13755;partial=true NZ_PYJW01000124.1 Protein Homology CDS 346 833 . - 2 ID=cds-WP_245306708.1;Parent=gene-C9E95_RS13415;Dbxref=GenBank:WP_245306708.1;Name=WP_245306708.1;end_range=833,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000503219.1;locus_tag=C9E95_RS13415;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_245306708.1;transl_table=11 ##sequence-region NZ_PYJW01000081.1 1 54018 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000081.1 RefSeq region 1 54018 . + . ID=NZ_PYJW01000081.1:1..54018;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000081.1 RefSeq gene 127 531 . + . ID=gene-C9E95_RS08185;Name=C9E95_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08185;old_locus_tag=C9E95_08380 NZ_PYJW01000081.1 Protein Homology CDS 127 531 . + 0 ID=cds-WP_001258090.1;Parent=gene-C9E95_RS08185;Dbxref=GenBank:WP_001258090.1;Name=WP_001258090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459016.1;locus_tag=C9E95_RS08185;product=DUF2541 family protein;protein_id=WP_001258090.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 567 1280 . + . ID=gene-C9E95_RS08190;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=C9E95_RS08190;old_locus_tag=C9E95_08385 NZ_PYJW01000081.1 Protein Homology CDS 567 1280 . + 0 ID=cds-WP_135369832.1;Parent=gene-C9E95_RS08190;Dbxref=GenBank:WP_135369832.1;Name=WP_135369832.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459015.1;locus_tag=C9E95_RS08190;product=acidic protein MsyB;protein_id=WP_135369832.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 1430 1996 . + . ID=gene-C9E95_RS08195;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=C9E95_RS08195;old_locus_tag=C9E95_08390 NZ_PYJW01000081.1 Protein Homology CDS 1430 1996 . + 0 ID=cds-WP_000528525.1;Parent=gene-C9E95_RS08195;Dbxref=GenBank:WP_000528525.1;Name=WP_000528525.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459014.1;locus_tag=C9E95_RS08195;product=acetate uptake transporter;protein_id=WP_000528525.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 2053 2643 . - . ID=gene-C9E95_RS08200;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=C9E95_RS08200;old_locus_tag=C9E95_08395 NZ_PYJW01000081.1 Protein Homology CDS 2053 2643 . - 0 ID=cds-WP_000380373.1;Parent=gene-C9E95_RS08200;Dbxref=GenBank:WP_000380373.1;Name=WP_000380373.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380375.1;locus_tag=C9E95_RS08200;product=molybdopterin adenylyltransferase;protein_id=WP_000380373.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 2903 3856 . - . ID=gene-C9E95_RS08205;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=C9E95_RS08205;old_locus_tag=C9E95_08400 NZ_PYJW01000081.1 Protein Homology CDS 2903 3856 . - 0 ID=cds-WP_000130175.1;Parent=gene-C9E95_RS08205;Dbxref=GenBank:WP_000130175.1;Name=WP_000130175.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459012.1;locus_tag=C9E95_RS08205;product=transaldolase;protein_id=WP_000130175.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 4125 5555 . + . ID=gene-C9E95_RS08210;Name=C9E95_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08210;old_locus_tag=C9E95_08405 NZ_PYJW01000081.1 Protein Homology CDS 4125 5555 . + 0 ID=cds-WP_001113803.1;Parent=gene-C9E95_RS08210;Dbxref=GenBank:WP_001113803.1;Name=WP_001113803.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459011.1;locus_tag=C9E95_RS08210;product=alanine/glycine:cation symporter family protein;protein_id=WP_001113803.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 5634 6407 . + . ID=gene-C9E95_RS08215;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=C9E95_RS08215;old_locus_tag=C9E95_08410 NZ_PYJW01000081.1 Protein Homology CDS 5634 6407 . + 0 ID=cds-WP_000906175.1;Parent=gene-C9E95_RS08215;Dbxref=GenBank:WP_000906175.1;Name=WP_000906175.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459010.1;locus_tag=C9E95_RS08215;product=peroxide stress protein YaaA;protein_id=WP_000906175.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 6500 7786 . - . ID=gene-C9E95_RS08220;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=C9E95_RS08220;old_locus_tag=C9E95_08415 NZ_PYJW01000081.1 Protein Homology CDS 6500 7786 . - 0 ID=cds-WP_001748841.1;Parent=gene-C9E95_RS08220;Dbxref=GenBank:WP_001748841.1;Name=WP_001748841.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459009.1;locus_tag=C9E95_RS08220;product=threonine synthase;protein_id=WP_001748841.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 7790 8719 . - . ID=gene-C9E95_RS08225;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=C9E95_RS08225;old_locus_tag=C9E95_08420 NZ_PYJW01000081.1 Protein Homology CDS 7790 8719 . - 0 ID=cds-WP_000241691.1;Parent=gene-C9E95_RS08225;Dbxref=GenBank:WP_000241691.1;Name=WP_000241691.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459008.1;locus_tag=C9E95_RS08225;product=homoserine kinase;protein_id=WP_000241691.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 8721 11183 . - . ID=gene-C9E95_RS08230;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=C9E95_RS08230;old_locus_tag=C9E95_08425 NZ_PYJW01000081.1 Protein Homology CDS 8721 11183 . - 0 ID=cds-WP_001264681.1;Parent=gene-C9E95_RS08230;Dbxref=GenBank:WP_001264681.1;Name=WP_001264681.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=C9E95_RS08230;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_001264681.1;transl_table=11 NZ_PYJW01000081.1 cmsearch sequence_feature 11209 11329 . - . ID=id-NZ_PYJW01000081.1:11209..11329;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_PYJW01000081.1 RefSeq gene 11265 11330 . - . ID=gene-C9E95_RS08235;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=C9E95_RS08235;old_locus_tag=C9E95_08430 NZ_PYJW01000081.1 Protein Homology CDS 11265 11330 . - 0 ID=cds-WP_001575544.1;Parent=gene-C9E95_RS08235;Dbxref=GenBank:WP_001575544.1;Name=WP_001575544.1;Ontology_term=GO:0009088,GO:0031554,GO:0031556;gbkey=CDS;gene=thrL;go_process=threonine biosynthetic process|0009088||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459006.1;locus_tag=C9E95_RS08235;product=thr operon leader peptide;protein_id=WP_001575544.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 11544 12230 . - . ID=gene-C9E95_RS08240;Name=C9E95_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08240;old_locus_tag=C9E95_08435 NZ_PYJW01000081.1 Protein Homology CDS 11544 12230 . - 0 ID=cds-WP_001266769.1;Parent=gene-C9E95_RS08240;Dbxref=GenBank:WP_001266769.1;Name=WP_001266769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463456.1;locus_tag=C9E95_RS08240;product=tRNA/rRNA methyltransferase;protein_id=WP_001266769.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 12630 12770 . - . ID=gene-C9E95_RS08245;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=C9E95_RS08245;old_locus_tag=C9E95_08440 NZ_PYJW01000081.1 Protein Homology CDS 12630 12770 . - 0 ID=cds-WP_001541509.1;Parent=gene-C9E95_RS08245;Dbxref=GenBank:WP_001541509.1;Name=WP_001541509.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463455.1;locus_tag=C9E95_RS08245;product=protein YjjY;protein_id=WP_001541509.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 12866 13582 . + . ID=gene-C9E95_RS08250;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=C9E95_RS08250;old_locus_tag=C9E95_08445 NZ_PYJW01000081.1 Protein Homology CDS 12866 13582 . + 0 ID=cds-WP_001194359.1;Parent=gene-C9E95_RS08250;Dbxref=GenBank:WP_001194359.1;Name=WP_001194359.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=C9E95_RS08250;product=two-component system response regulator ArcA;protein_id=WP_001194359.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 13849 14163 . + . ID=gene-C9E95_RS08255;Name=C9E95_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08255;old_locus_tag=C9E95_08450 NZ_PYJW01000081.1 Protein Homology CDS 13849 14163 . + 0 ID=cds-WP_000749515.1;Parent=gene-C9E95_RS08255;Dbxref=GenBank:WP_000749515.1;Name=WP_000749515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463453.1;locus_tag=C9E95_RS08255;product=hypothetical protein;protein_id=WP_000749515.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 14548 15219 . + . ID=gene-C9E95_RS08260;Name=C9E95_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08260;old_locus_tag=C9E95_08455 NZ_PYJW01000081.1 Protein Homology CDS 14548 15219 . + 0 ID=cds-WP_000811635.1;Parent=gene-C9E95_RS08260;Dbxref=GenBank:WP_000811635.1;Name=WP_000811635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463452.1;locus_tag=C9E95_RS08260;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000811635.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 15558 16103 . + . ID=gene-C9E95_RS08265;Name=C9E95_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08265;old_locus_tag=C9E95_08460 NZ_PYJW01000081.1 Protein Homology CDS 15558 16103 . + 0 ID=cds-WP_000482235.1;Parent=gene-C9E95_RS08265;Dbxref=GenBank:WP_000482235.1;Name=WP_000482235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463451.1;locus_tag=C9E95_RS08265;product=fimbrial protein;protein_id=WP_000482235.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 16174 16857 . + . ID=gene-C9E95_RS08270;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=C9E95_RS08270;old_locus_tag=C9E95_08465 NZ_PYJW01000081.1 Protein Homology CDS 16174 16857 . + 0 ID=cds-WP_000680522.1;Parent=gene-C9E95_RS08270;Dbxref=GenBank:WP_000680522.1;Name=WP_000680522.1;gbkey=CDS;gene=sthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463450.1;locus_tag=C9E95_RS08270;product=fimbrial biogenesis chaperone SthA;protein_id=WP_000680522.1;transl_table=11 NZ_PYJW01000081.1 RefSeq pseudogene 16903 19440 . + . ID=gene-C9E95_RS08275;Name=C9E95_RS08275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS08275;old_locus_tag=C9E95_08470;pseudo=true NZ_PYJW01000081.1 Protein Homology CDS 16903 19440 . + 0 ID=cds-C9E95_RS08275;Parent=gene-C9E95_RS08275;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=C9E95_RS08275;product=fimbrial outer membrane usher protein;pseudo=true;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 19458 20015 . + . ID=gene-C9E95_RS08280;Name=C9E95_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08280;old_locus_tag=C9E95_08475 NZ_PYJW01000081.1 Protein Homology CDS 19458 20015 . + 0 ID=cds-WP_001056982.1;Parent=gene-C9E95_RS08280;Dbxref=GenBank:WP_001056982.1;Name=WP_001056982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463448.1;locus_tag=C9E95_RS08280;product=fimbrial protein;protein_id=WP_001056982.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 20056 21141 . + . ID=gene-C9E95_RS08285;Name=sthE;gbkey=Gene;gene=sthE;gene_biotype=protein_coding;locus_tag=C9E95_RS08285;old_locus_tag=C9E95_08480 NZ_PYJW01000081.1 Protein Homology CDS 20056 21141 . + 0 ID=cds-WP_023181320.1;Parent=gene-C9E95_RS08285;Dbxref=GenBank:WP_023181320.1;Name=WP_023181320.1;gbkey=CDS;gene=sthE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463447.1;locus_tag=C9E95_RS08285;product=fimbrial major subunit SthE;protein_id=WP_023181320.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 21199 22548 . - . ID=gene-C9E95_RS08290;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=C9E95_RS08290;old_locus_tag=C9E95_08485 NZ_PYJW01000081.1 Protein Homology CDS 21199 22548 . - 0 ID=cds-WP_023258244.1;Parent=gene-C9E95_RS08290;Dbxref=GenBank:WP_023258244.1;Name=WP_023258244.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463446.1;locus_tag=C9E95_RS08290;product=cell envelope integrity protein CreD;protein_id=WP_023258244.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 22606 24030 . - . ID=gene-C9E95_RS08295;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=C9E95_RS08295;old_locus_tag=C9E95_08490 NZ_PYJW01000081.1 Protein Homology CDS 22606 24030 . - 0 ID=cds-WP_080203727.1;Parent=gene-C9E95_RS08295;Dbxref=GenBank:WP_080203727.1;Name=WP_080203727.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463445.1;locus_tag=C9E95_RS08295;product=two-component system sensor histidine kinase CreC;protein_id=WP_080203727.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 24030 24719 . - . ID=gene-C9E95_RS08300;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=C9E95_RS08300;old_locus_tag=C9E95_08495 NZ_PYJW01000081.1 Protein Homology CDS 24030 24719 . - 0 ID=cds-WP_001187046.1;Parent=gene-C9E95_RS08300;Dbxref=GenBank:WP_001187046.1;Name=WP_001187046.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463444.1;locus_tag=C9E95_RS08300;product=two-component system response regulator CreB;protein_id=WP_001187046.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 24732 25205 . - . ID=gene-C9E95_RS08305;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=C9E95_RS08305;old_locus_tag=C9E95_08500 NZ_PYJW01000081.1 Protein Homology CDS 24732 25205 . - 0 ID=cds-WP_000875811.1;Parent=gene-C9E95_RS08305;Dbxref=GenBank:WP_000875811.1;Name=WP_000875811.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463443.1;locus_tag=C9E95_RS08305;product=protein CreA;protein_id=WP_000875811.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 25417 26286 . + . ID=gene-C9E95_RS08310;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=C9E95_RS08310;old_locus_tag=C9E95_08505 NZ_PYJW01000081.1 Protein Homology CDS 25417 26286 . + 0 ID=cds-WP_000371685.1;Parent=gene-C9E95_RS08310;Dbxref=GenBank:WP_000371685.1;Name=WP_000371685.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463442.1;locus_tag=C9E95_RS08310;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_000371685.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 26283 26930 . - . ID=gene-C9E95_RS08315;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=C9E95_RS08315;old_locus_tag=C9E95_08510 NZ_PYJW01000081.1 Protein Homology CDS 26283 26930 . - 0 ID=cds-WP_000942363.1;Parent=gene-C9E95_RS08315;Dbxref=GenBank:WP_000942363.1;Name=WP_000942363.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463441.1;locus_tag=C9E95_RS08315;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_000942363.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 26979 27494 . + . ID=gene-C9E95_RS08320;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=C9E95_RS08320;old_locus_tag=C9E95_08515 NZ_PYJW01000081.1 Protein Homology CDS 26979 27494 . + 0 ID=cds-WP_080203726.1;Parent=gene-C9E95_RS08320;Dbxref=GenBank:WP_080203726.1;Name=WP_080203726.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463440.1;locus_tag=C9E95_RS08320;product=inosine/xanthosine triphosphatase;protein_id=WP_080203726.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 27596 27922 . - . ID=gene-C9E95_RS08330;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=C9E95_RS08330;old_locus_tag=C9E95_08525 NZ_PYJW01000081.1 Protein Homology CDS 27596 27922 . - 0 ID=cds-WP_000192003.1;Parent=gene-C9E95_RS08330;Dbxref=GenBank:WP_000192003.1;Name=WP_000192003.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463439.1;locus_tag=C9E95_RS08330;product=trp operon repressor;protein_id=WP_000192003.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 27980 29917 . - . ID=gene-C9E95_RS08335;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=C9E95_RS08335;old_locus_tag=C9E95_08530 NZ_PYJW01000081.1 Protein Homology CDS 27980 29917 . - 0 ID=cds-WP_000373272.1;Parent=gene-C9E95_RS08335;Dbxref=GenBank:WP_000373272.1;Name=WP_000373272.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155637.1;locus_tag=C9E95_RS08335;product=murein transglycosylase;protein_id=WP_000373272.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 30126 31793 . + . ID=gene-C9E95_RS08340;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=C9E95_RS08340;old_locus_tag=C9E95_08540 NZ_PYJW01000081.1 Protein Homology CDS 30126 31793 . + 0 ID=cds-WP_000046770.1;Parent=gene-C9E95_RS08340;Dbxref=GenBank:WP_000046770.1;Name=WP_000046770.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=C9E95_RS08340;product=energy-dependent translational throttle protein EttA;protein_id=WP_000046770.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 31911 33143 . - . ID=gene-C9E95_RS08345;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=C9E95_RS08345;old_locus_tag=C9E95_08545 NZ_PYJW01000081.1 Protein Homology CDS 31911 33143 . - 0 ID=cds-WP_001532645.1;Parent=gene-C9E95_RS08345;Dbxref=GenBank:WP_001532645.1;Name=WP_001532645.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=C9E95_RS08345;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_001532645.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 33294 34676 . - . ID=gene-C9E95_RS08350;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=C9E95_RS08350;old_locus_tag=C9E95_08550 NZ_PYJW01000081.1 Protein Homology CDS 33294 34676 . - 0 ID=cds-WP_001029720.1;Parent=gene-C9E95_RS08350;Dbxref=GenBank:WP_001029720.1;Name=WP_001029720.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=C9E95_RS08350;product=DNA repair protein RadA;protein_id=WP_001029720.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 34760 35728 . - . ID=gene-C9E95_RS08355;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=C9E95_RS08355;old_locus_tag=C9E95_08555 NZ_PYJW01000081.1 Protein Homology CDS 34760 35728 . - 0 ID=cds-WP_001132983.1;Parent=gene-C9E95_RS08355;Dbxref=GenBank:WP_001132983.1;Name=WP_001132983.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463434.1;locus_tag=C9E95_RS08355;product=phosphoserine phosphatase;protein_id=WP_001132983.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 35845 36489 . + . ID=gene-C9E95_RS08365;Name=C9E95_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08365;old_locus_tag=C9E95_08565 NZ_PYJW01000081.1 Protein Homology CDS 35845 36489 . + 0 ID=cds-WP_000090067.1;Parent=gene-C9E95_RS08365;Dbxref=GenBank:WP_000090067.1;Name=WP_000090067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463433.2;locus_tag=C9E95_RS08365;product=YtjB family periplasmic protein;protein_id=WP_000090067.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 36523 37539 . + . ID=gene-C9E95_RS08370;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=C9E95_RS08370;old_locus_tag=C9E95_08570 NZ_PYJW01000081.1 Protein Homology CDS 36523 37539 . + 0 ID=cds-WP_135369833.1;Parent=gene-C9E95_RS08370;Dbxref=GenBank:WP_135369833.1;Name=WP_135369833.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463432.1;locus_tag=C9E95_RS08370;product=lipoate--protein ligase LplA;protein_id=WP_135369833.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 37544 38872 . - . ID=gene-C9E95_RS08375;Name=yjjJ;gbkey=Gene;gene=yjjJ;gene_biotype=protein_coding;locus_tag=C9E95_RS08375;old_locus_tag=C9E95_08575 NZ_PYJW01000081.1 Protein Homology CDS 37544 38872 . - 0 ID=cds-WP_023204489.1;Parent=gene-C9E95_RS08375;Dbxref=GenBank:WP_023204489.1;Name=WP_023204489.1;gbkey=CDS;gene=yjjJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747246.1;locus_tag=C9E95_RS08375;product=type II toxin-antitoxin system HipA family toxin YjjJ;protein_id=WP_023204489.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 39051 39770 . - . ID=gene-C9E95_RS08380;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=C9E95_RS08380;old_locus_tag=C9E95_08580 NZ_PYJW01000081.1 Protein Homology CDS 39051 39770 . - 0 ID=cds-WP_076731246.1;Parent=gene-C9E95_RS08380;Dbxref=GenBank:WP_076731246.1;Name=WP_076731246.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463426.1;locus_tag=C9E95_RS08380;product=purine-nucleoside phosphorylase;protein_id=WP_076731246.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 39980 41203 . - . ID=gene-C9E95_RS08385;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=C9E95_RS08385;old_locus_tag=C9E95_08585 NZ_PYJW01000081.1 Protein Homology CDS 39980 41203 . - 0 ID=cds-WP_000816454.1;Parent=gene-C9E95_RS08385;Dbxref=GenBank:WP_000816454.1;Name=WP_000816454.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463425.1;locus_tag=C9E95_RS08385;product=phosphopentomutase;protein_id=WP_000816454.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 41255 42577 . - . ID=gene-C9E95_RS08390;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=C9E95_RS08390;old_locus_tag=C9E95_08590 NZ_PYJW01000081.1 Protein Homology CDS 41255 42577 . - 0 ID=cds-WP_000477838.1;Parent=gene-C9E95_RS08390;Dbxref=GenBank:WP_000477838.1;Name=WP_000477838.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=C9E95_RS08390;product=thymidine phosphorylase;protein_id=WP_000477838.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 42701 43480 . - . ID=gene-C9E95_RS08395;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=C9E95_RS08395;old_locus_tag=C9E95_08595 NZ_PYJW01000081.1 Protein Homology CDS 42701 43480 . - 0 ID=cds-WP_001519713.1;Parent=gene-C9E95_RS08395;Dbxref=GenBank:WP_001519713.1;Name=WP_001519713.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=C9E95_RS08395;product=deoxyribose-phosphate aldolase;protein_id=WP_001519713.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 43740 45290 . + . ID=gene-C9E95_RS08400;Name=C9E95_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08400;old_locus_tag=C9E95_08600 NZ_PYJW01000081.1 Protein Homology CDS 43740 45290 . + 0 ID=cds-WP_135369834.1;Parent=gene-C9E95_RS08400;Dbxref=GenBank:WP_135369834.1;Name=WP_135369834.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463422.1;locus_tag=C9E95_RS08400;product=YjjI family glycine radical enzyme;protein_id=WP_135369834.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 45262 46125 . + . ID=gene-C9E95_RS08405;Name=C9E95_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08405;old_locus_tag=C9E95_08605 NZ_PYJW01000081.1 Protein Homology CDS 45262 46125 . + 0 ID=cds-WP_001064941.1;Parent=gene-C9E95_RS08405;Dbxref=GenBank:WP_001064941.1;Name=WP_001064941.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463421.1;locus_tag=C9E95_RS08405;product=YjjW family glycine radical enzyme activase;protein_id=WP_001064941.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 46158 46931 . - . ID=gene-C9E95_RS08410;Name=C9E95_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08410;old_locus_tag=C9E95_08610 NZ_PYJW01000081.1 Protein Homology CDS 46158 46931 . - 0 ID=cds-WP_000119005.1;Parent=gene-C9E95_RS08410;Dbxref=GenBank:WP_000119005.1;Name=WP_000119005.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463420.1;locus_tag=C9E95_RS08410;product=metal-dependent hydrolase;protein_id=WP_000119005.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 46928 48001 . - . ID=gene-C9E95_RS08415;Name=C9E95_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08415;old_locus_tag=C9E95_08615 NZ_PYJW01000081.1 Protein Homology CDS 46928 48001 . - 0 ID=cds-WP_000531540.1;Parent=gene-C9E95_RS08415;Dbxref=GenBank:WP_000531540.1;Name=WP_000531540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463419.1;locus_tag=C9E95_RS08415;product=patatin-like phospholipase family protein;protein_id=WP_000531540.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 48125 48286 . - . ID=gene-C9E95_RS08420;Name=C9E95_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08420;old_locus_tag=C9E95_08620 NZ_PYJW01000081.1 Protein Homology CDS 48125 48286 . - 0 ID=cds-WP_000490276.1;Parent=gene-C9E95_RS08420;Dbxref=GenBank:WP_000490276.1;Name=WP_000490276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=C9E95_RS08420;product=DUF1328 domain-containing protein;protein_id=WP_000490276.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 48415 49032 . - . ID=gene-C9E95_RS08425;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=C9E95_RS08425;old_locus_tag=C9E95_08625 NZ_PYJW01000081.1 Protein Homology CDS 48415 49032 . - 0 ID=cds-WP_000178963.1;Parent=gene-C9E95_RS08425;Dbxref=GenBank:WP_000178963.1;Name=WP_000178963.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463417.1;locus_tag=C9E95_RS08425;product=molecular chaperone OsmY;protein_id=WP_000178963.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 49435 51024 . - . ID=gene-C9E95_RS08430;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=C9E95_RS08430;old_locus_tag=C9E95_08630 NZ_PYJW01000081.1 Protein Homology CDS 49435 51024 . - 0 ID=cds-WP_000175966.1;Parent=gene-C9E95_RS08430;Dbxref=GenBank:WP_000175966.1;Name=WP_000175966.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=C9E95_RS08430;product=peptide chain release factor 3;protein_id=WP_000175966.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 51116 51793 . - . ID=gene-C9E95_RS08435;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=C9E95_RS08435;old_locus_tag=C9E95_08635 NZ_PYJW01000081.1 Protein Homology CDS 51116 51793 . - 0 ID=cds-WP_000870686.1;Parent=gene-C9E95_RS08435;Dbxref=GenBank:WP_000870686.1;Name=WP_000870686.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=C9E95_RS08435;product=pyrimidine 5'-nucleotidase;protein_id=WP_000870686.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 51815 52261 . - . ID=gene-C9E95_RS08440;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=C9E95_RS08440;old_locus_tag=C9E95_08640 NZ_PYJW01000081.1 Protein Homology CDS 51815 52261 . - 0 ID=cds-WP_001092435.1;Parent=gene-C9E95_RS08440;Dbxref=GenBank:WP_001092435.1;Name=WP_001092435.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463414.1;locus_tag=C9E95_RS08440;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001092435.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 52206 52643 . - . ID=gene-C9E95_RS08445;Name=C9E95_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08445;old_locus_tag=C9E95_08645 NZ_PYJW01000081.1 Protein Homology CDS 52206 52643 . - 0 ID=cds-WP_039517394.1;Parent=gene-C9E95_RS08445;Dbxref=GenBank:WP_039517394.1;Name=WP_039517394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463413.1;locus_tag=C9E95_RS08445;product=DNA polymerase III subunit psi;protein_id=WP_039517394.1;transl_table=11 NZ_PYJW01000081.1 RefSeq gene 52746 53774 . + . ID=gene-C9E95_RS08450;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=C9E95_RS08450;old_locus_tag=C9E95_08650 NZ_PYJW01000081.1 Protein Homology CDS 52746 53774 . + 0 ID=cds-WP_080203722.1;Parent=gene-C9E95_RS08450;Dbxref=GenBank:WP_080203722.1;Name=WP_080203722.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=C9E95_RS08450;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_080203722.1;transl_table=11 ##sequence-region NZ_PYJW01000117.1 1 53945 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000117.1 RefSeq region 1 53945 . + . ID=NZ_PYJW01000117.1:1..53945;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000117.1 RefSeq gene 186 302 . + . ID=gene-C9E95_RS12700;Name=C9E95_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12700;old_locus_tag=C9E95_13035 NZ_PYJW01000117.1 Protein Homology CDS 186 302 . + 0 ID=cds-WP_001597434.1;Parent=gene-C9E95_RS12700;Dbxref=GenBank:WP_001597434.1;Name=WP_001597434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448342.1;locus_tag=C9E95_RS12700;product=hypothetical protein;protein_id=WP_001597434.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 299 727 . + . ID=gene-C9E95_RS12705;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=C9E95_RS12705;old_locus_tag=C9E95_13040 NZ_PYJW01000117.1 Protein Homology CDS 299 727 . + 0 ID=cds-WP_080204007.1;Parent=gene-C9E95_RS12705;Dbxref=GenBank:WP_080204007.1;Name=WP_080204007.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460884.1;locus_tag=C9E95_RS12705;product=universal stress protein UspC;protein_id=WP_080204007.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 745 2166 . - . ID=gene-C9E95_RS12710;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=C9E95_RS12710;old_locus_tag=C9E95_13045 NZ_PYJW01000117.1 Protein Homology CDS 745 2166 . - 0 ID=cds-WP_000089042.1;Parent=gene-C9E95_RS12710;Dbxref=GenBank:WP_000089042.1;Name=WP_000089042.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460885.1;locus_tag=C9E95_RS12710;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_000089042.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 2141 2944 . - . ID=gene-C9E95_RS12715;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=C9E95_RS12715;old_locus_tag=C9E95_13050 NZ_PYJW01000117.1 Protein Homology CDS 2141 2944 . - 0 ID=cds-WP_000840116.1;Parent=gene-C9E95_RS12715;Dbxref=GenBank:WP_000840116.1;Name=WP_000840116.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460886.1;locus_tag=C9E95_RS12715;product=trehalose-phosphatase;protein_id=WP_000840116.1;transl_table=11 NZ_PYJW01000117.1 RefSeq pseudogene 3167 3347 . - . ID=gene-C9E95_RS12720;Name=araH;end_range=3347,.;gbkey=Gene;gene=araH;gene_biotype=pseudogene;locus_tag=C9E95_RS12720;old_locus_tag=C9E95_13055;partial=true;pseudo=true NZ_PYJW01000117.1 Protein Homology CDS 3167 3347 . - 0 ID=cds-C9E95_RS12720;Parent=gene-C9E95_RS12720;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3347,.;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026162.2;locus_tag=C9E95_RS12720;partial=true;product=L-arabinose ABC transporter permease AraH;pseudo=true;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 3459 4016 . - . ID=gene-C9E95_RS12725;Name=C9E95_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12725;old_locus_tag=C9E95_13060 NZ_PYJW01000117.1 Protein Homology CDS 3459 4016 . - 0 ID=cds-WP_000754796.1;Parent=gene-C9E95_RS12725;Dbxref=GenBank:WP_000754796.1;Name=WP_000754796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460887.1;locus_tag=C9E95_RS12725;product=DJ-1/PfpI family protein;protein_id=WP_000754796.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 4566 5069 . + . ID=gene-C9E95_RS12730;Name=C9E95_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12730;old_locus_tag=C9E95_13065 NZ_PYJW01000117.1 Protein Homology CDS 4566 5069 . + 0 ID=cds-WP_000741707.1;Parent=gene-C9E95_RS12730;Dbxref=GenBank:WP_000741707.1;Name=WP_000741707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460888.1;locus_tag=C9E95_RS12730;product=non-heme ferritin-like protein;protein_id=WP_000741707.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 5248 5886 . - . ID=gene-C9E95_RS12735;Name=C9E95_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12735;old_locus_tag=C9E95_13070 NZ_PYJW01000117.1 Protein Homology CDS 5248 5886 . - 0 ID=cds-WP_000684804.1;Parent=gene-C9E95_RS12735;Dbxref=GenBank:WP_000684804.1;Name=WP_000684804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460889.1;locus_tag=C9E95_RS12735;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_000684804.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 6142 6477 . + . ID=gene-C9E95_RS12740;Name=C9E95_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12740;old_locus_tag=C9E95_13075 NZ_PYJW01000117.1 Protein Homology CDS 6142 6477 . + 0 ID=cds-WP_000803229.1;Parent=gene-C9E95_RS12740;Dbxref=GenBank:WP_000803229.1;Name=WP_000803229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460890.1;locus_tag=C9E95_RS12740;product=YecR-like lipofamily protein;protein_id=WP_000803229.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 6717 7214 . + . ID=gene-C9E95_RS12745;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=C9E95_RS12745;old_locus_tag=C9E95_13080 NZ_PYJW01000117.1 Protein Homology CDS 6717 7214 . + 0 ID=cds-WP_000920619.1;Parent=gene-C9E95_RS12745;Dbxref=GenBank:WP_000920619.1;Name=WP_000920619.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920608.1;locus_tag=C9E95_RS12745;product=non-heme ferritin;protein_id=WP_000920619.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 7260 7499 . - . ID=gene-C9E95_RS12750;Name=C9E95_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12750;old_locus_tag=C9E95_13085 NZ_PYJW01000117.1 Protein Homology CDS 7260 7499 . - 0 ID=cds-WP_000377238.1;Parent=gene-C9E95_RS12750;Dbxref=GenBank:WP_000377238.1;Name=WP_000377238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460892.1;locus_tag=C9E95_RS12750;product=YecH family metal-binding protein;protein_id=WP_000377238.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 7726 8937 . + . ID=gene-C9E95_RS12755;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=C9E95_RS12755;old_locus_tag=C9E95_13090 NZ_PYJW01000117.1 Protein Homology CDS 7726 8937 . + 0 ID=cds-WP_001562965.1;Parent=gene-C9E95_RS12755;Dbxref=GenBank:WP_001562965.1;Name=WP_001562965.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460893.1;locus_tag=C9E95_RS12755;product=tyrosine transporter TyrP;protein_id=WP_001562965.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 9012 9677 . - . ID=gene-C9E95_RS12760;Name=C9E95_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12760;old_locus_tag=C9E95_13095 NZ_PYJW01000117.1 Protein Homology CDS 9012 9677 . - 0 ID=cds-WP_000781526.1;Parent=gene-C9E95_RS12760;Dbxref=GenBank:WP_000781526.1;Name=WP_000781526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460894.1;locus_tag=C9E95_RS12760;product=YecA family protein;protein_id=WP_000781526.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 9916 10242 . - . ID=gene-C9E95_RS12765;Name=C9E95_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12765;old_locus_tag=C9E95_13100 NZ_PYJW01000117.1 Protein Homology CDS 9916 10242 . - 0 ID=cds-WP_000240832.1;Parent=gene-C9E95_RS12765;Dbxref=GenBank:WP_000240832.1;Name=WP_000240832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460895.1;locus_tag=C9E95_RS12765;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000240832.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 10455 11894 . - . ID=gene-C9E95_RS12770;Name=C9E95_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12770;old_locus_tag=C9E95_13105 NZ_PYJW01000117.1 Protein Homology CDS 10455 11894 . - 0 ID=cds-WP_077677857.1;Parent=gene-C9E95_RS12770;Dbxref=GenBank:WP_077677857.1;Name=WP_077677857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460896.1;locus_tag=C9E95_RS12770;product=SH3 domain-containing C40 family peptidase;protein_id=WP_077677857.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 12108 12440 . - . ID=gene-C9E95_RS12775;Name=C9E95_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12775;old_locus_tag=C9E95_13110 NZ_PYJW01000117.1 Protein Homology CDS 12108 12440 . - 0 ID=cds-WP_001521174.1;Parent=gene-C9E95_RS12775;Dbxref=GenBank:WP_001521174.1;Name=WP_001521174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460897.1;locus_tag=C9E95_RS12775;product=hypothetical protein;protein_id=WP_001521174.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 12690 12776 . - . ID=gene-C9E95_RS12780;Name=C9E95_RS12780;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS12780;old_locus_tag=C9E95_13115 NZ_PYJW01000117.1 tRNAscan-SE tRNA 12690 12776 . - . ID=rna-C9E95_RS12780;Parent=gene-C9E95_RS12780;anticodon=(pos:complement(12740..12742));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS12780;product=tRNA-Leu NZ_PYJW01000117.1 tRNAscan-SE exon 12690 12776 . - . ID=exon-C9E95_RS12780-1;Parent=rna-C9E95_RS12780;anticodon=(pos:complement(12740..12742));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS12780;product=tRNA-Leu NZ_PYJW01000117.1 RefSeq gene 12788 12861 . - . ID=gene-C9E95_RS12785;Name=C9E95_RS12785;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS12785;old_locus_tag=C9E95_13120 NZ_PYJW01000117.1 tRNAscan-SE tRNA 12788 12861 . - . ID=rna-C9E95_RS12785;Parent=gene-C9E95_RS12785;anticodon=(pos:complement(12827..12829));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS12785;product=tRNA-Cys NZ_PYJW01000117.1 tRNAscan-SE exon 12788 12861 . - . ID=exon-C9E95_RS12785-1;Parent=rna-C9E95_RS12785;anticodon=(pos:complement(12827..12829));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS12785;product=tRNA-Cys NZ_PYJW01000117.1 RefSeq gene 12914 12989 . - . ID=gene-C9E95_RS12790;Name=C9E95_RS12790;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS12790;old_locus_tag=C9E95_13125 NZ_PYJW01000117.1 tRNAscan-SE tRNA 12914 12989 . - . ID=rna-C9E95_RS12790;Parent=gene-C9E95_RS12790;anticodon=(pos:complement(12954..12956));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS12790;product=tRNA-Gly NZ_PYJW01000117.1 tRNAscan-SE exon 12914 12989 . - . ID=exon-C9E95_RS12790-1;Parent=rna-C9E95_RS12790;anticodon=(pos:complement(12954..12956));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS12790;product=tRNA-Gly NZ_PYJW01000117.1 RefSeq gene 13141 13689 . - . ID=gene-C9E95_RS12795;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=C9E95_RS12795;old_locus_tag=C9E95_13130 NZ_PYJW01000117.1 Protein Homology CDS 13141 13689 . - 0 ID=cds-WP_001160192.1;Parent=gene-C9E95_RS12795;Dbxref=GenBank:WP_001160192.1;Name=WP_001160192.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460898.1;locus_tag=C9E95_RS12795;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_001160192.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 13746 15578 . - . ID=gene-C9E95_RS12800;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=C9E95_RS12800;old_locus_tag=C9E95_13135 NZ_PYJW01000117.1 Protein Homology CDS 13746 15578 . - 0 ID=cds-WP_080204008.1;Parent=gene-C9E95_RS12800;Dbxref=GenBank:WP_080204008.1;Name=WP_080204008.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460899.1;locus_tag=C9E95_RS12800;product=excinuclease ABC subunit UvrC;protein_id=WP_080204008.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 15575 16231 . - . ID=gene-C9E95_RS12805;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=C9E95_RS12805;old_locus_tag=C9E95_13140 NZ_PYJW01000117.1 Protein Homology CDS 15575 16231 . - 0 ID=cds-WP_000611323.1;Parent=gene-C9E95_RS12805;Dbxref=GenBank:WP_000611323.1;Name=WP_000611323.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460900.1;locus_tag=C9E95_RS12805;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_000611323.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 16543 16698 . + . ID=gene-C9E95_RS12810;Name=C9E95_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12810;old_locus_tag=C9E95_13145 NZ_PYJW01000117.1 Protein Homology CDS 16543 16698 . + 0 ID=cds-WP_000546186.1;Parent=gene-C9E95_RS12810;Dbxref=GenBank:WP_000546186.1;Name=WP_000546186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448360.1;locus_tag=C9E95_RS12810;product=hypothetical protein;protein_id=WP_000546186.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 16695 16919 . + . ID=gene-C9E95_RS12815;Name=C9E95_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12815;old_locus_tag=C9E95_13150 NZ_PYJW01000117.1 Protein Homology CDS 16695 16919 . + 0 ID=cds-WP_000106483.1;Parent=gene-C9E95_RS12815;Dbxref=GenBank:WP_000106483.1;Name=WP_000106483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460902.1;locus_tag=C9E95_RS12815;product=DUF2594 family protein;protein_id=WP_000106483.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 16986 17708 . - . ID=gene-C9E95_RS12820;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=C9E95_RS12820;old_locus_tag=C9E95_13155 NZ_PYJW01000117.1 Protein Homology CDS 16986 17708 . - 0 ID=cds-WP_001157167.1;Parent=gene-C9E95_RS12820;Dbxref=GenBank:WP_001157167.1;Name=WP_001157167.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460903.1;locus_tag=C9E95_RS12820;product=transcriptional regulator SdiA;protein_id=WP_001157167.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 17941 18693 . - . ID=gene-C9E95_RS12825;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=C9E95_RS12825;old_locus_tag=C9E95_13160 NZ_PYJW01000117.1 Protein Homology CDS 17941 18693 . - 0 ID=cds-WP_021000448.1;Parent=gene-C9E95_RS12825;Dbxref=GenBank:WP_021000448.1;Name=WP_021000448.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460904.1;locus_tag=C9E95_RS12825;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=WP_021000448.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 18690 19358 . - . ID=gene-C9E95_RS12830;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=C9E95_RS12830;old_locus_tag=C9E95_13165 NZ_PYJW01000117.1 Protein Homology CDS 18690 19358 . - 0 ID=cds-WP_001158238.1;Parent=gene-C9E95_RS12830;Dbxref=GenBank:WP_001158238.1;Name=WP_001158238.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460905.1;locus_tag=C9E95_RS12830;product=cystine ABC transporter permease;protein_id=WP_001158238.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 19379 20365 . - . ID=gene-C9E95_RS12835;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=C9E95_RS12835;old_locus_tag=C9E95_13170 NZ_PYJW01000117.1 Protein Homology CDS 19379 20365 . - 0 ID=cds-WP_001128188.1;Parent=gene-C9E95_RS12835;Dbxref=GenBank:WP_001128188.1;Name=WP_001128188.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460906.1;locus_tag=C9E95_RS12835;product=D-cysteine desulfhydrase;protein_id=WP_001128188.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 20519 21319 . - . ID=gene-C9E95_RS12840;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=C9E95_RS12840;old_locus_tag=C9E95_13175 NZ_PYJW01000117.1 Protein Homology CDS 20519 21319 . - 0 ID=cds-WP_000761634.1;Parent=gene-C9E95_RS12840;Dbxref=GenBank:WP_000761634.1;Name=WP_000761634.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460907.1;locus_tag=C9E95_RS12840;product=cystine ABC transporter substrate-binding protein;protein_id=WP_000761634.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 21466 22017 . - . ID=gene-C9E95_RS12845;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=C9E95_RS12845;old_locus_tag=C9E95_13180 NZ_PYJW01000117.1 Protein Homology CDS 21466 22017 . - 0 ID=cds-WP_000218080.1;Parent=gene-C9E95_RS12845;Dbxref=GenBank:WP_000218080.1;Name=WP_000218080.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460908.1;locus_tag=C9E95_RS12845;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_000218080.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 22076 22795 . - . ID=gene-C9E95_RS12850;Name=C9E95_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12850;old_locus_tag=C9E95_13185 NZ_PYJW01000117.1 Protein Homology CDS 22076 22795 . - 0 ID=cds-WP_001087453.1;Parent=gene-C9E95_RS12850;Dbxref=GenBank:WP_001087453.1;Name=WP_001087453.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460909.1;locus_tag=C9E95_RS12850;product=RNA polymerase sigma factor FliA;protein_id=WP_001087453.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 22992 24197 . - . ID=gene-C9E95_RS12855;Name=fliB;gbkey=Gene;gene=fliB;gene_biotype=protein_coding;locus_tag=C9E95_RS12855;old_locus_tag=C9E95_13190 NZ_PYJW01000117.1 Protein Homology CDS 22992 24197 . - 0 ID=cds-WP_000659233.1;Parent=gene-C9E95_RS12855;Dbxref=GenBank:WP_000659233.1;Name=WP_000659233.1;gbkey=CDS;gene=fliB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460911.1;locus_tag=C9E95_RS12855;product=flagellin lysine-N-methylase;protein_id=WP_000659233.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 24276 25757 . - . ID=gene-C9E95_RS12860;Name=C9E95_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12860;old_locus_tag=C9E95_13195 NZ_PYJW01000117.1 Protein Homology CDS 24276 25757 . - 0 ID=cds-WP_000079808.1;Parent=gene-C9E95_RS12860;Dbxref=GenBank:WP_000079808.1;Name=WP_000079808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460912.1;locus_tag=C9E95_RS12860;product=FliC/FljB family flagellin;protein_id=WP_000079808.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 26014 27417 . + . ID=gene-C9E95_RS12865;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=C9E95_RS12865;old_locus_tag=C9E95_13200 NZ_PYJW01000117.1 Protein Homology CDS 26014 27417 . + 0 ID=cds-WP_000146802.1;Parent=gene-C9E95_RS12865;Dbxref=GenBank:WP_000146802.1;Name=WP_000146802.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460913.1;locus_tag=C9E95_RS12865;product=flagellar filament capping protein FliD;protein_id=WP_000146802.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 27432 27839 . + . ID=gene-C9E95_RS12870;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=C9E95_RS12870;old_locus_tag=C9E95_13205 NZ_PYJW01000117.1 Protein Homology CDS 27432 27839 . + 0 ID=cds-WP_000287764.1;Parent=gene-C9E95_RS12870;Dbxref=GenBank:WP_000287764.1;Name=WP_000287764.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460914.1;locus_tag=C9E95_RS12870;product=flagellar export chaperone FliS;protein_id=WP_000287764.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 27839 28207 . + . ID=gene-C9E95_RS12875;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=C9E95_RS12875;old_locus_tag=C9E95_13210 NZ_PYJW01000117.1 Protein Homology CDS 27839 28207 . + 0 ID=cds-WP_000204899.1;Parent=gene-C9E95_RS12875;Dbxref=GenBank:WP_000204899.1;Name=WP_000204899.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460915.1;locus_tag=C9E95_RS12875;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_000204899.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 28279 29763 . + . ID=gene-C9E95_RS12880;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=C9E95_RS12880;old_locus_tag=C9E95_13215 NZ_PYJW01000117.1 Protein Homology CDS 28279 29763 . + 0 ID=cds-WP_135369845.1;Parent=gene-C9E95_RS12880;Dbxref=GenBank:WP_135369845.1;Name=WP_135369845.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460916.1;locus_tag=C9E95_RS12880;product=alpha-amylase;protein_id=WP_135369845.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 29803 30216 . - . ID=gene-C9E95_RS12885;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=C9E95_RS12885;old_locus_tag=C9E95_13220 NZ_PYJW01000117.1 Protein Homology CDS 29803 30216 . - 0 ID=cds-WP_000754694.1;Parent=gene-C9E95_RS12885;Dbxref=GenBank:WP_000754694.1;Name=WP_000754694.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754699.1;locus_tag=C9E95_RS12885;product=lipoprotein YedD;protein_id=WP_000754694.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 30402 31607 . + . ID=gene-C9E95_RS12890;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=C9E95_RS12890;old_locus_tag=C9E95_13225 NZ_PYJW01000117.1 Protein Homology CDS 30402 31607 . + 0 ID=cds-WP_001535233.1;Parent=gene-C9E95_RS12890;Dbxref=GenBank:WP_001535233.1;Name=WP_001535233.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156840.1;locus_tag=C9E95_RS12890;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_001535233.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 31604 31837 . + . ID=gene-C9E95_RS12895;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=C9E95_RS12895;old_locus_tag=C9E95_13230 NZ_PYJW01000117.1 Protein Homology CDS 31604 31837 . + 0 ID=cds-WP_000790504.1;Parent=gene-C9E95_RS12895;Dbxref=GenBank:WP_000790504.1;Name=WP_000790504.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=C9E95_RS12895;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_000790504.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 32102 32488 . + . ID=gene-C9E95_RS12900;Name=C9E95_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12900;old_locus_tag=C9E95_13235 NZ_PYJW01000117.1 Protein Homology CDS 32102 32488 . + 0 ID=cds-WP_000639596.1;Parent=gene-C9E95_RS12900;Dbxref=GenBank:WP_000639596.1;Name=WP_000639596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448379.1;locus_tag=C9E95_RS12900;product=hypothetical protein;protein_id=WP_000639596.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 32608 32922 . - . ID=gene-C9E95_RS12905;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=C9E95_RS12905;old_locus_tag=C9E95_13240 NZ_PYJW01000117.1 Protein Homology CDS 32608 32922 . - 0 ID=cds-WP_000719042.1;Parent=gene-C9E95_RS12905;Dbxref=GenBank:WP_000719042.1;Name=WP_000719042.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460921.1;locus_tag=C9E95_RS12905;product=flagellar hook-basal body complex protein FliE;protein_id=WP_000719042.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 33139 34821 . + . ID=gene-C9E95_RS12910;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=C9E95_RS12910;old_locus_tag=C9E95_13245 NZ_PYJW01000117.1 Protein Homology CDS 33139 34821 . + 0 ID=cds-WP_135369846.1;Parent=gene-C9E95_RS12910;Dbxref=GenBank:WP_135369846.1;Name=WP_135369846.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460922.1;locus_tag=C9E95_RS12910;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_135369846.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 34814 35809 . + . ID=gene-C9E95_RS12915;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=C9E95_RS12915;old_locus_tag=C9E95_13250 NZ_PYJW01000117.1 Protein Homology CDS 34814 35809 . + 0 ID=cds-WP_000067735.1;Parent=gene-C9E95_RS12915;Dbxref=GenBank:WP_000067735.1;Name=WP_000067735.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460923.1;locus_tag=C9E95_RS12915;product=flagellar motor switch protein FliG;protein_id=WP_000067735.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 35802 36509 . + . ID=gene-C9E95_RS12920;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=C9E95_RS12920;old_locus_tag=C9E95_13255 NZ_PYJW01000117.1 Protein Homology CDS 35802 36509 . + 0 ID=cds-WP_000064163.1;Parent=gene-C9E95_RS12920;Dbxref=GenBank:WP_000064163.1;Name=WP_000064163.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460924.1;locus_tag=C9E95_RS12920;product=flagellar assembly protein FliH;protein_id=WP_000064163.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 36509 37879 . + . ID=gene-C9E95_RS12925;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=C9E95_RS12925;old_locus_tag=C9E95_13260 NZ_PYJW01000117.1 Protein Homology CDS 36509 37879 . + 0 ID=cds-WP_000213257.1;Parent=gene-C9E95_RS12925;Dbxref=GenBank:WP_000213257.1;Name=WP_000213257.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460925.1;locus_tag=C9E95_RS12925;product=flagellar protein export ATPase FliI;protein_id=WP_000213257.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 37901 38344 . + . ID=gene-C9E95_RS12930;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=C9E95_RS12930;old_locus_tag=C9E95_13265 NZ_PYJW01000117.1 Protein Homology CDS 37901 38344 . + 0 ID=cds-WP_000046981.1;Parent=gene-C9E95_RS12930;Dbxref=GenBank:WP_000046981.1;Name=WP_000046981.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460926.1;locus_tag=C9E95_RS12930;product=flagellar export protein FliJ;protein_id=WP_000046981.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 38341 39564 . + . ID=gene-C9E95_RS12935;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=C9E95_RS12935;old_locus_tag=C9E95_13270 NZ_PYJW01000117.1 Protein Homology CDS 38341 39564 . + 0 ID=cds-WP_000631673.1;Parent=gene-C9E95_RS12935;Dbxref=GenBank:WP_000631673.1;Name=WP_000631673.1;Ontology_term=GO:0044780,GO:0009424;gbkey=CDS;gene=fliK;go_component=bacterial-type flagellum hook|0009424||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460927.1;locus_tag=C9E95_RS12935;product=flagellar hook length control protein FliK;protein_id=WP_000631673.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 39669 40136 . + . ID=gene-C9E95_RS12940;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=C9E95_RS12940;old_locus_tag=C9E95_13275 NZ_PYJW01000117.1 Protein Homology CDS 39669 40136 . + 0 ID=cds-WP_000132169.1;Parent=gene-C9E95_RS12940;Dbxref=GenBank:WP_000132169.1;Name=WP_000132169.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460928.1;locus_tag=C9E95_RS12940;product=flagellar basal body-associated protein FliL;protein_id=WP_000132169.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 40141 41145 . + . ID=gene-C9E95_RS12945;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=C9E95_RS12945;old_locus_tag=C9E95_13280 NZ_PYJW01000117.1 Protein Homology CDS 40141 41145 . + 0 ID=cds-WP_000502811.1;Parent=gene-C9E95_RS12945;Dbxref=GenBank:WP_000502811.1;Name=WP_000502811.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=C9E95_RS12945;product=flagellar motor switch protein FliM;protein_id=WP_000502811.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 41142 41555 . + . ID=gene-C9E95_RS12950;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=C9E95_RS12950;old_locus_tag=C9E95_13285 NZ_PYJW01000117.1 Protein Homology CDS 41142 41555 . + 0 ID=cds-WP_001282115.1;Parent=gene-C9E95_RS12950;Dbxref=GenBank:WP_001282115.1;Name=WP_001282115.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460930.1;locus_tag=C9E95_RS12950;product=flagellar motor switch protein FliN;protein_id=WP_001282115.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 41555 41932 . + . ID=gene-C9E95_RS12955;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=C9E95_RS12955;old_locus_tag=C9E95_13290 NZ_PYJW01000117.1 Protein Homology CDS 41555 41932 . + 0 ID=cds-WP_001648874.1;Parent=gene-C9E95_RS12955;Dbxref=GenBank:WP_001648874.1;Name=WP_001648874.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460931.3;locus_tag=C9E95_RS12955;product=flagellar biosynthetic protein FliO;protein_id=WP_001648874.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 41932 42669 . + . ID=gene-C9E95_RS12960;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=C9E95_RS12960;old_locus_tag=C9E95_13295 NZ_PYJW01000117.1 Protein Homology CDS 41932 42669 . + 0 ID=cds-WP_001253411.1;Parent=gene-C9E95_RS12960;Dbxref=GenBank:WP_001253411.1;Name=WP_001253411.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460932.1;locus_tag=C9E95_RS12960;product=flagellar type III secretion system pore protein FliP;protein_id=WP_001253411.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 42679 42948 . + . ID=gene-C9E95_RS12965;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=C9E95_RS12965;old_locus_tag=C9E95_13300 NZ_PYJW01000117.1 Protein Homology CDS 42679 42948 . + 0 ID=cds-WP_000187355.1;Parent=gene-C9E95_RS12965;Dbxref=GenBank:WP_000187355.1;Name=WP_000187355.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=C9E95_RS12965;product=flagellar biosynthesis protein FliQ;protein_id=WP_000187355.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 42957 43751 . + . ID=gene-C9E95_RS12970;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=C9E95_RS12970;old_locus_tag=C9E95_13305 NZ_PYJW01000117.1 Protein Homology CDS 42957 43751 . + 0 ID=cds-WP_000616949.1;Parent=gene-C9E95_RS12970;Dbxref=GenBank:WP_000616949.1;Name=WP_000616949.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460934.1;locus_tag=C9E95_RS12970;product=flagellar biosynthetic protein FliR;protein_id=WP_000616949.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 44033 44656 . + . ID=gene-C9E95_RS12975;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=C9E95_RS12975;old_locus_tag=C9E95_13310 NZ_PYJW01000117.1 Protein Homology CDS 44033 44656 . + 0 ID=cds-WP_000103971.1;Parent=gene-C9E95_RS12975;Dbxref=GenBank:WP_000103971.1;Name=WP_000103971.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460935.1;locus_tag=C9E95_RS12975;product=transcriptional regulator RcsA;protein_id=WP_000103971.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 44695 44889 . - . ID=gene-C9E95_RS12980;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=C9E95_RS12980;old_locus_tag=C9E95_13315 NZ_PYJW01000117.1 Protein Homology CDS 44695 44889 . - 0 ID=cds-WP_000867218.1;Parent=gene-C9E95_RS12980;Dbxref=GenBank:WP_000867218.1;Name=WP_000867218.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736680.1;locus_tag=C9E95_RS12980;product=protein DsrB;protein_id=WP_000867218.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 45018 45245 . + . ID=gene-C9E95_RS12985;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=C9E95_RS12985;old_locus_tag=C9E95_13320 NZ_PYJW01000117.1 Protein Homology CDS 45018 45245 . + 0 ID=cds-WP_000844798.1;Parent=gene-C9E95_RS12985;Dbxref=GenBank:WP_000844798.1;Name=WP_000844798.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460936.1;locus_tag=C9E95_RS12985;product=YodD family peroxide/acid resistance protein;protein_id=WP_000844798.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 45555 46370 . + . ID=gene-C9E95_RS12990;Name=C9E95_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12990;old_locus_tag=C9E95_13325 NZ_PYJW01000117.1 Protein Homology CDS 45555 46370 . + 0 ID=cds-WP_000948800.1;Parent=gene-C9E95_RS12990;Dbxref=GenBank:WP_000948800.1;Name=WP_000948800.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460937.1;locus_tag=C9E95_RS12990;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WP_000948800.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 46349 48061 . - . ID=gene-C9E95_RS12995;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=C9E95_RS12995;old_locus_tag=C9E95_13330 NZ_PYJW01000117.1 Protein Homology CDS 46349 48061 . - 0 ID=cds-WP_001119828.1;Parent=gene-C9E95_RS12995;Dbxref=GenBank:WP_001119828.1;Name=WP_001119828.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460938.1;locus_tag=C9E95_RS12995;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_001119828.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 48226 48411 . - . ID=gene-C9E95_RS13000;Name=C9E95_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13000;old_locus_tag=C9E95_13335 NZ_PYJW01000117.1 Protein Homology CDS 48226 48411 . - 0 ID=cds-WP_000232161.1;Parent=gene-C9E95_RS13000;Dbxref=GenBank:WP_000232161.1;Name=WP_000232161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549490.1;locus_tag=C9E95_RS13000;product=YodC family protein;protein_id=WP_000232161.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 48488 49405 . - . ID=gene-C9E95_RS13005;Name=C9E95_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13005;old_locus_tag=C9E95_13340 NZ_PYJW01000117.1 Protein Homology CDS 48488 49405 . - 0 ID=cds-WP_085920526.1;Parent=gene-C9E95_RS13005;Dbxref=GenBank:WP_085920526.1;Name=WP_085920526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=C9E95_RS13005;product=DUF808 domain-containing protein;protein_id=WP_085920526.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 49574 50494 . + . ID=gene-C9E95_RS13015;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=C9E95_RS13015;old_locus_tag=C9E95_13350 NZ_PYJW01000117.1 Protein Homology CDS 49574 50494 . + 0 ID=cds-WP_001212265.1;Parent=gene-C9E95_RS13015;Dbxref=GenBank:WP_001212265.1;Name=WP_001212265.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460941.1;locus_tag=C9E95_RS13015;product=drug/metabolite exporter YedA;protein_id=WP_001212265.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 50483 50953 . - . ID=gene-C9E95_RS13020;Name=C9E95_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13020;old_locus_tag=C9E95_13355 NZ_PYJW01000117.1 Protein Homology CDS 50483 50953 . - 0 ID=cds-WP_000785978.1;Parent=gene-C9E95_RS13020;Dbxref=GenBank:WP_000785978.1;Name=WP_000785978.1;Ontology_term=GO:0006298,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460942.1;locus_tag=C9E95_RS13020;product=very short patch repair endonuclease;protein_id=WP_000785978.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 50934 52364 . - . ID=gene-C9E95_RS13025;Name=C9E95_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13025;old_locus_tag=C9E95_13360 NZ_PYJW01000117.1 Protein Homology CDS 50934 52364 . - 0 ID=cds-WP_001623639.1;Parent=gene-C9E95_RS13025;Dbxref=GenBank:WP_001623639.1;Name=WP_001623639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460943.1;locus_tag=C9E95_RS13025;product=DNA cytosine methyltransferase;protein_id=WP_001623639.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 52438 53133 . - . ID=gene-C9E95_RS13030;Name=C9E95_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13030;old_locus_tag=C9E95_13365 NZ_PYJW01000117.1 Protein Homology CDS 52438 53133 . - 0 ID=cds-WP_080219689.1;Parent=gene-C9E95_RS13030;Dbxref=GenBank:WP_080219689.1;Name=WP_080219689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460944.1;locus_tag=C9E95_RS13030;product=phosphohydrolase;protein_id=WP_080219689.1;transl_table=11 NZ_PYJW01000117.1 RefSeq gene 53213 53524 . - . ID=gene-C9E95_RS13035;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=C9E95_RS13035;old_locus_tag=C9E95_13370 NZ_PYJW01000117.1 Protein Homology CDS 53213 53524 . - 0 ID=cds-WP_080204100.1;Parent=gene-C9E95_RS13035;Dbxref=GenBank:WP_080204100.1;Name=WP_080204100.1;Ontology_term=GO:0051301;gbkey=CDS;gene=drpB;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460945.1;locus_tag=C9E95_RS13035;product=cell division protein DrpB;protein_id=WP_080204100.1;transl_table=11 ##sequence-region NZ_PYJW01000113.1 1 241 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000113.1 RefSeq region 1 241 . + . ID=NZ_PYJW01000113.1:1..241;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000113.1 RefSeq gene 57 192 . + . ID=gene-C9E95_RS11945;Name=C9E95_RS11945;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E95_RS11945;old_locus_tag=C9E95_12255 NZ_PYJW01000113.1 cmsearch ncRNA 57 192 . + . ID=rna-C9E95_RS11945;Parent=gene-C9E95_RS11945;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS11945;product=RtT sRNA NZ_PYJW01000113.1 cmsearch exon 57 192 . + . ID=exon-C9E95_RS11945-1;Parent=rna-C9E95_RS11945;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS11945;product=RtT sRNA ##sequence-region NZ_PYJW01000028.1 1 232 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000028.1 RefSeq region 1 232 . + . ID=NZ_PYJW01000028.1:1..232;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000028.1 RefSeq gene 96 171 . - . ID=gene-C9E95_RS01740;Name=C9E95_RS01740;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS01740;old_locus_tag=C9E95_01775 NZ_PYJW01000028.1 tRNAscan-SE tRNA 96 171 . - . ID=rna-C9E95_RS01740;Parent=gene-C9E95_RS01740;anticodon=(pos:complement(136..138));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS01740;product=tRNA-Thr NZ_PYJW01000028.1 tRNAscan-SE exon 96 171 . - . ID=exon-C9E95_RS01740-1;Parent=rna-C9E95_RS01740;anticodon=(pos:complement(136..138));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS01740;product=tRNA-Thr ##sequence-region NZ_PYJW01000017.1 1 224 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000017.1 RefSeq region 1 224 . + . ID=NZ_PYJW01000017.1:1..224;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000017.1 RefSeq gene 1 224 . - . ID=gene-C9E95_RS01050;Name=C9E95_RS01050;end_range=224,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9E95_RS01050;old_locus_tag=C9E95_01065;partial=true;start_range=.,1 NZ_PYJW01000017.1 cmsearch rRNA 1 224 . - . ID=rna-C9E95_RS01050;Parent=gene-C9E95_RS01050;Dbxref=RFAM:RF02541;end_range=224,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS01050;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_PYJW01000017.1 cmsearch exon 1 224 . - . ID=exon-C9E95_RS01050-1;Parent=rna-C9E95_RS01050;Dbxref=RFAM:RF02541;end_range=224,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS01050;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_PYJW01000152.1 1 221 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000152.1 RefSeq region 1 221 . + . ID=NZ_PYJW01000152.1:1..221;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica ##sequence-region NZ_PYJW01000159.1 1 203 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000159.1 RefSeq region 1 203 . + . ID=NZ_PYJW01000159.1:1..203;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica ##sequence-region NZ_PYJW01000160.1 1 53736 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000160.1 RefSeq region 1 53736 . + . ID=NZ_PYJW01000160.1:1..53736;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000160.1 RefSeq gene 80 156 . - . ID=gene-C9E95_RS18355;Name=C9E95_RS18355;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS18355;old_locus_tag=C9E95_18810 NZ_PYJW01000160.1 tRNAscan-SE tRNA 80 156 . - . ID=rna-C9E95_RS18355;Parent=gene-C9E95_RS18355;anticodon=(pos:complement(120..122));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS18355;product=tRNA-Met NZ_PYJW01000160.1 tRNAscan-SE exon 80 156 . - . ID=exon-C9E95_RS18355-1;Parent=rna-C9E95_RS18355;anticodon=(pos:complement(120..122));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS18355;product=tRNA-Met NZ_PYJW01000160.1 RefSeq gene 186 262 . - . ID=gene-C9E95_RS18360;Name=C9E95_RS18360;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS18360;old_locus_tag=C9E95_18815 NZ_PYJW01000160.1 tRNAscan-SE tRNA 186 262 . - . ID=rna-C9E95_RS18360;Parent=gene-C9E95_RS18360;anticodon=(pos:complement(226..228));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS18360;product=tRNA-Met NZ_PYJW01000160.1 tRNAscan-SE exon 186 262 . - . ID=exon-C9E95_RS18360-1;Parent=rna-C9E95_RS18360;anticodon=(pos:complement(226..228));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS18360;product=tRNA-Met NZ_PYJW01000160.1 RefSeq gene 470 1567 . + . ID=gene-C9E95_RS18365;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=C9E95_RS18365;old_locus_tag=C9E95_18820 NZ_PYJW01000160.1 Protein Homology CDS 470 1567 . + 0 ID=cds-WP_000678626.1;Parent=gene-C9E95_RS18365;Dbxref=GenBank:WP_000678626.1;Name=WP_000678626.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=C9E95_RS18365;product=murein transglycosylase A;protein_id=WP_000678626.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 1677 2483 . + . ID=gene-C9E95_RS18370;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=C9E95_RS18370;old_locus_tag=C9E95_18825 NZ_PYJW01000160.1 Protein Homology CDS 1677 2483 . + 0 ID=cds-WP_000117750.1;Parent=gene-C9E95_RS18370;Dbxref=GenBank:WP_000117750.1;Name=WP_000117750.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461906.1;locus_tag=C9E95_RS18370;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_000117750.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 2534 3421 . - . ID=gene-C9E95_RS18375;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=C9E95_RS18375;old_locus_tag=C9E95_18830 NZ_PYJW01000160.1 Protein Homology CDS 2534 3421 . - 0 ID=cds-WP_077248417.1;Parent=gene-C9E95_RS18375;Dbxref=GenBank:WP_077248417.1;Name=WP_077248417.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461905.3;locus_tag=C9E95_RS18375;product=EamA family transporter RarD;protein_id=WP_077248417.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 3721 4164 . - . ID=gene-C9E95_RS18380;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=C9E95_RS18380;old_locus_tag=C9E95_18835 NZ_PYJW01000160.1 Protein Homology CDS 3721 4164 . - 0 ID=cds-WP_000184199.1;Parent=gene-C9E95_RS18380;Dbxref=GenBank:WP_000184199.1;Name=WP_000184199.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000184199.1;locus_tag=C9E95_RS18380;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_000184199.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 4164 5369 . - . ID=gene-C9E95_RS18385;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=C9E95_RS18385;old_locus_tag=C9E95_18840 NZ_PYJW01000160.1 Protein Homology CDS 4164 5369 . - 0 ID=cds-WP_000991053.1;Parent=gene-C9E95_RS18385;Dbxref=GenBank:WP_000991053.1;Name=WP_000991053.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461903.1;locus_tag=C9E95_RS18385;product=cysteine desulfurase CsdA;protein_id=WP_000991053.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 5562 5789 . + . ID=gene-C9E95_RS18390;Name=C9E95_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18390;old_locus_tag=C9E95_18845 NZ_PYJW01000160.1 Protein Homology CDS 5562 5789 . + 0 ID=cds-WP_000750393.1;Parent=gene-C9E95_RS18390;Dbxref=GenBank:WP_000750393.1;Name=WP_000750393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461902.1;locus_tag=C9E95_RS18390;product=YgdI/YgdR family lipoprotein;protein_id=WP_000750393.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 6136 7053 . + . ID=gene-C9E95_RS18395;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=C9E95_RS18395;old_locus_tag=C9E95_18850 NZ_PYJW01000160.1 Protein Homology CDS 6136 7053 . + 0 ID=cds-WP_000044409.1;Parent=gene-C9E95_RS18395;Dbxref=GenBank:WP_000044409.1;Name=WP_000044409.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=C9E95_RS18395;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_000044409.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 7072 7467 . + . ID=gene-C9E95_RS18400;Name=C9E95_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18400;old_locus_tag=C9E95_18855 NZ_PYJW01000160.1 Protein Homology CDS 7072 7467 . + 0 ID=cds-WP_000203913.1;Parent=gene-C9E95_RS18400;Dbxref=GenBank:WP_000203913.1;Name=WP_000203913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461900.1;locus_tag=C9E95_RS18400;product=DUF423 domain-containing protein;protein_id=WP_000203913.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 7460 8560 . + . ID=gene-C9E95_RS18405;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=C9E95_RS18405;old_locus_tag=C9E95_18860 NZ_PYJW01000160.1 Protein Homology CDS 7460 8560 . + 0 ID=cds-WP_001045499.1;Parent=gene-C9E95_RS18405;Dbxref=GenBank:WP_001045499.1;Name=WP_001045499.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=C9E95_RS18405;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_001045499.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 8619 9329 . - . ID=gene-C9E95_RS18410;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=C9E95_RS18410;old_locus_tag=C9E95_18865 NZ_PYJW01000160.1 Protein Homology CDS 8619 9329 . - 0 ID=cds-WP_000642330.1;Parent=gene-C9E95_RS18410;Dbxref=GenBank:WP_000642330.1;Name=WP_000642330.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461898.1;locus_tag=C9E95_RS18410;product=L-fucose operon activator;protein_id=WP_000642330.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 9387 9809 . - . ID=gene-C9E95_RS18415;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=C9E95_RS18415;old_locus_tag=C9E95_18870 NZ_PYJW01000160.1 Protein Homology CDS 9387 9809 . - 0 ID=cds-WP_000920848.1;Parent=gene-C9E95_RS18415;Dbxref=GenBank:WP_000920848.1;Name=WP_000920848.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461897.1;locus_tag=C9E95_RS18415;product=L-fucose mutarotase;protein_id=WP_000920848.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 9811 11229 . - . ID=gene-C9E95_RS18420;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=C9E95_RS18420;old_locus_tag=C9E95_18875 NZ_PYJW01000160.1 Protein Homology CDS 9811 11229 . - 0 ID=cds-WP_021294469.1;Parent=gene-C9E95_RS18420;Dbxref=GenBank:WP_021294469.1;Name=WP_021294469.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461896.1;locus_tag=C9E95_RS18420;product=L-fuculokinase;protein_id=WP_021294469.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 11330 13105 . - . ID=gene-C9E95_RS18425;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=C9E95_RS18425;old_locus_tag=C9E95_18880 NZ_PYJW01000160.1 Protein Homology CDS 11330 13105 . - 0 ID=cds-WP_000724126.1;Parent=gene-C9E95_RS18425;Dbxref=GenBank:WP_000724126.1;Name=WP_000724126.1;Ontology_term=GO:0019317,GO:0008736,GO:0030145,GO:0005737;gbkey=CDS;gene=fucI;go_component=cytoplasm|0005737||IEA;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461895.1;locus_tag=C9E95_RS18425;product=L-fucose isomerase;protein_id=WP_000724126.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 13137 14459 . - . ID=gene-C9E95_RS18430;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=C9E95_RS18430;old_locus_tag=C9E95_18885 NZ_PYJW01000160.1 Protein Homology CDS 13137 14459 . - 0 ID=cds-WP_080219558.1;Parent=gene-C9E95_RS18430;Dbxref=GenBank:WP_080219558.1;Name=WP_080219558.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=C9E95_RS18430;product=L-fucose:H+ symporter permease;protein_id=WP_080219558.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 15016 15663 . + . ID=gene-C9E95_RS18435;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=C9E95_RS18435;old_locus_tag=C9E95_18890 NZ_PYJW01000160.1 Protein Homology CDS 15016 15663 . + 0 ID=cds-WP_000440819.1;Parent=gene-C9E95_RS18435;Dbxref=GenBank:WP_000440819.1;Name=WP_000440819.1;Ontology_term=GO:0006004,GO:0008270,GO:0008738;gbkey=CDS;gene=fucA;go_function=zinc ion binding|0008270||IEA,L-fuculose-phosphate aldolase activity|0008738||IEA;go_process=fucose metabolic process|0006004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461894.1;locus_tag=C9E95_RS18435;product=L-fuculose-phosphate aldolase;protein_id=WP_000440819.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 15680 16828 . + . ID=gene-C9E95_RS18440;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=C9E95_RS18440;old_locus_tag=C9E95_18895 NZ_PYJW01000160.1 Protein Homology CDS 15680 16828 . + 0 ID=cds-WP_000013563.1;Parent=gene-C9E95_RS18440;Dbxref=GenBank:WP_000013563.1;Name=WP_000013563.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461893.1;locus_tag=C9E95_RS18440;product=lactaldehyde reductase;protein_id=WP_000013563.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 16920 17675 . - . ID=gene-C9E95_RS18445;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=C9E95_RS18445;old_locus_tag=C9E95_18900 NZ_PYJW01000160.1 Protein Homology CDS 16920 17675 . - 0 ID=cds-WP_001519360.1;Parent=gene-C9E95_RS18445;Dbxref=GenBank:WP_001519360.1;Name=WP_001519360.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=C9E95_RS18445;product=flap endonuclease Xni;protein_id=WP_001519360.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 17845 19212 . - . ID=gene-C9E95_RS18455;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=C9E95_RS18455;old_locus_tag=C9E95_18910 NZ_PYJW01000160.1 Protein Homology CDS 17845 19212 . - 0 ID=cds-WP_000626384.1;Parent=gene-C9E95_RS18455;Dbxref=GenBank:WP_000626384.1;Name=WP_000626384.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461891.2;locus_tag=C9E95_RS18455;product=L-serine ammonia-lyase II;protein_id=WP_000626384.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 19271 20560 . - . ID=gene-C9E95_RS18460;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=C9E95_RS18460;old_locus_tag=C9E95_18915 NZ_PYJW01000160.1 Protein Homology CDS 19271 20560 . - 0 ID=cds-WP_000450462.1;Parent=gene-C9E95_RS18460;Dbxref=GenBank:WP_000450462.1;Name=WP_000450462.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461890.1;locus_tag=C9E95_RS18460;product=HAAAP family serine/threonine permease SdaC;protein_id=WP_000450462.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 21125 22489 . - . ID=gene-C9E95_RS18465;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=C9E95_RS18465;old_locus_tag=C9E95_18920 NZ_PYJW01000160.1 Protein Homology CDS 21125 22489 . - 0 ID=cds-WP_000627973.1;Parent=gene-C9E95_RS18465;Dbxref=GenBank:WP_000627973.1;Name=WP_000627973.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461889.1;locus_tag=C9E95_RS18465;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_000627973.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 22602 23450 . - . ID=gene-C9E95_RS18470;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=C9E95_RS18470;old_locus_tag=C9E95_18925 NZ_PYJW01000160.1 Protein Homology CDS 22602 23450 . - 0 ID=cds-WP_023993971.1;Parent=gene-C9E95_RS18470;Dbxref=GenBank:WP_023993971.1;Name=WP_023993971.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461888.1;locus_tag=C9E95_RS18470;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_023993971.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 23519 24064 . + . ID=gene-C9E95_RS18475;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=C9E95_RS18475;old_locus_tag=C9E95_18930 NZ_PYJW01000160.1 Protein Homology CDS 23519 24064 . + 0 ID=cds-WP_000343990.1;Parent=gene-C9E95_RS18475;Dbxref=GenBank:WP_000343990.1;Name=WP_000343990.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461887.1;locus_tag=C9E95_RS18475;product=SecY-interacting protein;protein_id=WP_000343990.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 24675 25004 . + . ID=gene-C9E95_RS18485;Name=C9E95_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18485;old_locus_tag=C9E95_18940 NZ_PYJW01000160.1 Protein Homology CDS 24675 25004 . + 0 ID=cds-WP_001804977.1;Parent=gene-C9E95_RS18485;Dbxref=GenBank:WP_001804977.1;Name=WP_001804977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461886.1;locus_tag=C9E95_RS18485;product=YqcC family protein;protein_id=WP_001804977.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 25004 25786 . + . ID=gene-C9E95_RS18490;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=C9E95_RS18490;old_locus_tag=C9E95_18945 NZ_PYJW01000160.1 Protein Homology CDS 25004 25786 . + 0 ID=cds-WP_000890030.1;Parent=gene-C9E95_RS18490;Dbxref=GenBank:WP_000890030.1;Name=WP_000890030.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001715016.1;locus_tag=C9E95_RS18490;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_000890030.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 25805 26254 . + . ID=gene-C9E95_RS18495;Name=C9E95_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18495;old_locus_tag=C9E95_18950 NZ_PYJW01000160.1 Protein Homology CDS 25805 26254 . + 0 ID=cds-WP_000807731.1;Parent=gene-C9E95_RS18495;Dbxref=GenBank:WP_000807731.1;Name=WP_000807731.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461884.1;locus_tag=C9E95_RS18495;product=flavodoxin;protein_id=WP_000807731.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 26404 26652 . - . ID=gene-C9E95_RS18500;Name=C9E95_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18500;old_locus_tag=C9E95_18955 NZ_PYJW01000160.1 GeneMarkS-2+ CDS 26404 26652 . - 0 ID=cds-WP_001531815.1;Parent=gene-C9E95_RS18500;Dbxref=GenBank:WP_001531815.1;Name=WP_001531815.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS18500;product=hypothetical protein;protein_id=WP_001531815.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 26735 28093 . + . ID=gene-C9E95_RS18505;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=C9E95_RS18505;old_locus_tag=C9E95_18960 NZ_PYJW01000160.1 Protein Homology CDS 26735 28093 . + 0 ID=cds-WP_000097015.1;Parent=gene-C9E95_RS18505;Dbxref=GenBank:WP_000097015.1;Name=WP_000097015.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461883.1;locus_tag=C9E95_RS18505;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_000097015.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 28090 29430 . + . ID=gene-C9E95_RS18510;Name=C9E95_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18510;old_locus_tag=C9E95_18965 NZ_PYJW01000160.1 Protein Homology CDS 28090 29430 . + 0 ID=cds-WP_000211797.1;Parent=gene-C9E95_RS18510;Dbxref=GenBank:WP_000211797.1;Name=WP_000211797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461882.1;locus_tag=C9E95_RS18510;product=enolase C-terminal domain-like protein;protein_id=WP_000211797.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 29451 30791 . + . ID=gene-C9E95_RS18515;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=C9E95_RS18515;old_locus_tag=C9E95_18970 NZ_PYJW01000160.1 Protein Homology CDS 29451 30791 . + 0 ID=cds-WP_000107113.1;Parent=gene-C9E95_RS18515;Dbxref=GenBank:WP_000107113.1;Name=WP_000107113.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=C9E95_RS18515;product=glucarate dehydratase;protein_id=WP_000107113.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 30869 32011 . + . ID=gene-C9E95_RS18520;Name=C9E95_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18520;old_locus_tag=C9E95_18975 NZ_PYJW01000160.1 Protein Homology CDS 30869 32011 . + 0 ID=cds-WP_000706479.1;Parent=gene-C9E95_RS18520;Dbxref=GenBank:WP_000706479.1;Name=WP_000706479.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461880.1;locus_tag=C9E95_RS18520;product=glycerate kinase;protein_id=WP_000706479.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 32055 34811 . - . ID=gene-C9E95_RS18525;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=C9E95_RS18525;old_locus_tag=C9E95_18980 NZ_PYJW01000160.1 Protein Homology CDS 32055 34811 . - 0 ID=cds-WP_000186400.1;Parent=gene-C9E95_RS18525;Dbxref=GenBank:WP_000186400.1;Name=WP_000186400.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461879.1;locus_tag=C9E95_RS18525;product=two-component sensor histidine kinase BarA;protein_id=WP_000186400.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 34869 36164 . + . ID=gene-C9E95_RS18530;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=C9E95_RS18530;old_locus_tag=C9E95_18985 NZ_PYJW01000160.1 Protein Homology CDS 34869 36164 . + 0 ID=cds-WP_000046853.1;Parent=gene-C9E95_RS18530;Dbxref=GenBank:WP_000046853.1;Name=WP_000046853.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461878.1;locus_tag=C9E95_RS18530;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_000046853.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 36216 38450 . + . ID=gene-C9E95_RS18535;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=C9E95_RS18535;old_locus_tag=C9E95_18990 NZ_PYJW01000160.1 Protein Homology CDS 36216 38450 . + 0 ID=cds-WP_000226841.1;Parent=gene-C9E95_RS18535;Dbxref=GenBank:WP_000226841.1;Name=WP_000226841.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461877.1;locus_tag=C9E95_RS18535;product=GTP diphosphokinase;protein_id=WP_000226841.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 38534 38890 . + . ID=gene-C9E95_RS18540;Name=C9E95_RS18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18540;old_locus_tag=C9E95_18995 NZ_PYJW01000160.1 Protein Homology CDS 38534 38890 . + 0 ID=cds-WP_000480218.1;Parent=gene-C9E95_RS18540;Dbxref=GenBank:WP_000480218.1;Name=WP_000480218.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461876.3;locus_tag=C9E95_RS18540;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_000480218.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 38856 39152 . + . ID=gene-C9E95_RS18545;Name=C9E95_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18545;old_locus_tag=C9E95_19000 NZ_PYJW01000160.1 Protein Homology CDS 38856 39152 . + 0 ID=cds-WP_023993973.1;Parent=gene-C9E95_RS18545;Dbxref=GenBank:WP_023993973.1;Name=WP_023993973.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532579.1;locus_tag=C9E95_RS18545;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_023993973.1;transl_table=11 NZ_PYJW01000160.1 RefSeq pseudogene 39171 39314 . - . ID=gene-C9E95_RS23565;Name=C9E95_RS23565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23565;old_locus_tag=C9E95_19005;partial=true;pseudo=true;start_range=.,39171 NZ_PYJW01000160.1 Protein Homology CDS 39171 39314 . - 0 ID=cds-C9E95_RS23565;Parent=gene-C9E95_RS23565;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466162.1;locus_tag=C9E95_RS23565;partial=true;product=fimbrial protein;pseudo=true;start_range=.,39171;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 39923 40723 . + . ID=gene-C9E95_RS18555;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=C9E95_RS18555;old_locus_tag=C9E95_19010 NZ_PYJW01000160.1 Protein Homology CDS 39923 40723 . + 0 ID=cds-WP_000210451.1;Parent=gene-C9E95_RS18555;Dbxref=GenBank:WP_000210451.1;Name=WP_000210451.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461875.1;locus_tag=C9E95_RS18555;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_000210451.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 40951 42588 . + . ID=gene-C9E95_RS18560;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=C9E95_RS18560;old_locus_tag=C9E95_19015 NZ_PYJW01000160.1 Protein Homology CDS 40951 42588 . + 0 ID=cds-WP_000210863.1;Parent=gene-C9E95_RS18560;Dbxref=GenBank:WP_000210863.1;Name=WP_000210863.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=C9E95_RS18560;product=glutamine hydrolyzing CTP synthase;protein_id=WP_000210863.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 42671 43969 . + . ID=gene-C9E95_RS18565;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=C9E95_RS18565;old_locus_tag=C9E95_19020 NZ_PYJW01000160.1 Protein Homology CDS 42671 43969 . + 0 ID=cds-WP_000036734.1;Parent=gene-C9E95_RS18565;Dbxref=GenBank:WP_000036734.1;Name=WP_000036734.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=C9E95_RS18565;product=phosphopyruvate hydratase;protein_id=WP_000036734.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 44105 44776 . + . ID=gene-C9E95_RS18570;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=C9E95_RS18570;old_locus_tag=C9E95_19025 NZ_PYJW01000160.1 Protein Homology CDS 44105 44776 . + 0 ID=cds-WP_001199961.1;Parent=gene-C9E95_RS18570;Dbxref=GenBank:WP_001199961.1;Name=WP_001199961.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=C9E95_RS18570;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001199961.1;transl_table=11 NZ_PYJW01000160.1 RefSeq direct_repeat 45073 46078 . + . ID=id-NZ_PYJW01000160.1:45073..46078;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=45073..45101;rpt_unit_seq=gtgttccccgcgccagcggggataaaccg NZ_PYJW01000160.1 RefSeq gene 46237 47034 . + . ID=gene-C9E95_RS18575;Name=C9E95_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18575;old_locus_tag=C9E95_19030 NZ_PYJW01000160.1 Protein Homology CDS 46237 47034 . + 0 ID=cds-WP_080203813.1;Parent=gene-C9E95_RS18575;Dbxref=GenBank:WP_080203813.1;Name=WP_080203813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461871.1;locus_tag=C9E95_RS18575;product=MBL fold metallo-hydrolase;protein_id=WP_080203813.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 47122 47484 . - . ID=gene-C9E95_RS18580;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=C9E95_RS18580;old_locus_tag=C9E95_19035 NZ_PYJW01000160.1 Protein Homology CDS 47122 47484 . - 0 ID=cds-WP_000108313.1;Parent=gene-C9E95_RS18580;Dbxref=GenBank:WP_000108313.1;Name=WP_000108313.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461870.1;locus_tag=C9E95_RS18580;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_000108313.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 47908 49707 . + . ID=gene-C9E95_RS18590;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=C9E95_RS18590;old_locus_tag=C9E95_19045 NZ_PYJW01000160.1 Protein Homology CDS 47908 49707 . + 0 ID=cds-WP_023993660.1;Parent=gene-C9E95_RS18590;Dbxref=GenBank:WP_023993660.1;Name=WP_023993660.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461869.1;locus_tag=C9E95_RS18590;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_023993660.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 49707 51419 . + . ID=gene-C9E95_RS18595;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=C9E95_RS18595;old_locus_tag=C9E95_19050 NZ_PYJW01000160.1 Protein Homology CDS 49707 51419 . + 0 ID=cds-WP_023993661.1;Parent=gene-C9E95_RS18595;Dbxref=GenBank:WP_023993661.1;Name=WP_023993661.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=C9E95_RS18595;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_023993661.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 51521 52255 . + . ID=gene-C9E95_RS18605;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=C9E95_RS18605;old_locus_tag=C9E95_19060 NZ_PYJW01000160.1 Protein Homology CDS 51521 52255 . + 0 ID=cds-WP_000039870.1;Parent=gene-C9E95_RS18605;Dbxref=GenBank:WP_000039870.1;Name=WP_000039870.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461867.1;locus_tag=C9E95_RS18605;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000039870.1;transl_table=11 NZ_PYJW01000160.1 RefSeq gene 52468 53421 . - . ID=gene-C9E95_RS18610;Name=sopD;gbkey=Gene;gene=sopD;gene_biotype=protein_coding;locus_tag=C9E95_RS18610;old_locus_tag=C9E95_19070 NZ_PYJW01000160.1 Protein Homology CDS 52468 53421 . - 0 ID=cds-WP_080081587.1;Parent=gene-C9E95_RS18610;Dbxref=GenBank:WP_080081587.1;Name=WP_080081587.1;gbkey=CDS;gene=sopD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441126.1;locus_tag=C9E95_RS18610;product=SPI-1 type III secretion system effector SopD;protein_id=WP_080081587.1;transl_table=11 ##sequence-region NZ_PYJW01000075.1 1 52003 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000075.1 RefSeq region 1 52003 . + . ID=NZ_PYJW01000075.1:1..52003;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000075.1 RefSeq gene 84 2246 . - . ID=gene-C9E95_RS07500;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=C9E95_RS07500;old_locus_tag=C9E95_07675 NZ_PYJW01000075.1 Protein Homology CDS 84 2246 . - 0 ID=cds-WP_000383432.1;Parent=gene-C9E95_RS07500;Dbxref=GenBank:WP_000383432.1;Name=WP_000383432.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462836.1;locus_tag=C9E95_RS07500;product=DNA helicase II;protein_id=WP_000383432.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 2382 3098 . - . ID=gene-C9E95_RS07505;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=C9E95_RS07505;old_locus_tag=C9E95_07680 NZ_PYJW01000075.1 Protein Homology CDS 2382 3098 . - 0 ID=cds-WP_080204062.1;Parent=gene-C9E95_RS07505;Dbxref=GenBank:WP_080204062.1;Name=WP_080204062.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462835.1;locus_tag=C9E95_RS07505;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_080204062.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 3098 4000 . - . ID=gene-C9E95_RS07510;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=C9E95_RS07510;old_locus_tag=C9E95_07685 NZ_PYJW01000075.1 Protein Homology CDS 3098 4000 . - 0 ID=cds-WP_000132874.1;Parent=gene-C9E95_RS07510;Dbxref=GenBank:WP_000132874.1;Name=WP_000132874.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462834.1;locus_tag=C9E95_RS07510;product=tyrosine recombinase XerC;protein_id=WP_000132874.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 3997 4704 . - . ID=gene-C9E95_RS07515;Name=C9E95_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07515;old_locus_tag=C9E95_07690 NZ_PYJW01000075.1 Protein Homology CDS 3997 4704 . - 0 ID=cds-WP_000812763.1;Parent=gene-C9E95_RS07515;Dbxref=GenBank:WP_000812763.1;Name=WP_000812763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462833.1;locus_tag=C9E95_RS07515;product=DUF484 domain-containing protein;protein_id=WP_000812763.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 4701 5525 . - . ID=gene-C9E95_RS07520;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=C9E95_RS07520;old_locus_tag=C9E95_07695 NZ_PYJW01000075.1 Protein Homology CDS 4701 5525 . - 0 ID=cds-WP_001160671.1;Parent=gene-C9E95_RS07520;Dbxref=GenBank:WP_001160671.1;Name=WP_001160671.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=C9E95_RS07520;product=diaminopimelate epimerase;protein_id=WP_001160671.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 5562 5765 . - . ID=gene-C9E95_RS07525;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=C9E95_RS07525;old_locus_tag=C9E95_07700 NZ_PYJW01000075.1 Protein Homology CDS 5562 5765 . - 0 ID=cds-WP_000799903.1;Parent=gene-C9E95_RS07525;Dbxref=GenBank:WP_000799903.1;Name=WP_000799903.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462831.1;locus_tag=C9E95_RS07525;product=LPS translocon maturation chaperone LptM;protein_id=WP_000799903.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 5951 6202 . + . ID=gene-C9E95_RS23170;Name=C9E95_RS23170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23170;old_locus_tag=C9E95_07705 NZ_PYJW01000075.1 GeneMarkS-2+ CDS 5951 6202 . + 0 ID=cds-WP_024145461.1;Parent=gene-C9E95_RS23170;Dbxref=GenBank:WP_024145461.1;Name=WP_024145461.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS23170;product=hypothetical protein;protein_id=WP_024145461.1;transl_table=11 NZ_PYJW01000075.1 RefSeq pseudogene 6172 6473 . + . ID=gene-C9E95_RS07530;Name=C9E95_RS07530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS07530;old_locus_tag=C9E95_07710;partial=true;pseudo=true;start_range=.,6172 NZ_PYJW01000075.1 Protein Homology CDS 6172 6473 . + 0 ID=cds-C9E95_RS07530;Parent=gene-C9E95_RS07530;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200019.1;locus_tag=C9E95_RS07530;partial=true;product=hypothetical protein;pseudo=true;start_range=.,6172;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 6461 6850 . + . ID=gene-C9E95_RS07535;Name=C9E95_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07535;old_locus_tag=C9E95_07715 NZ_PYJW01000075.1 Protein Homology CDS 6461 6850 . + 0 ID=cds-WP_001125557.1;Parent=gene-C9E95_RS07535;Dbxref=GenBank:WP_001125557.1;Name=WP_001125557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462830.1;locus_tag=C9E95_RS07535;product=DUF3021 family protein;protein_id=WP_001125557.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 6920 7240 . + . ID=gene-C9E95_RS07540;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=C9E95_RS07540;old_locus_tag=C9E95_07720 NZ_PYJW01000075.1 Protein Homology CDS 6920 7240 . + 0 ID=cds-WP_000999919.1;Parent=gene-C9E95_RS07540;Dbxref=GenBank:WP_000999919.1;Name=WP_000999919.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=C9E95_RS07540;product=iron donor protein CyaY;protein_id=WP_000999919.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 7318 9864 . - . ID=gene-C9E95_RS07545;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=C9E95_RS07545;old_locus_tag=C9E95_07725 NZ_PYJW01000075.1 Protein Homology CDS 7318 9864 . - 0 ID=cds-WP_080204063.1;Parent=gene-C9E95_RS07545;Dbxref=GenBank:WP_080204063.1;Name=WP_080204063.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462825.1;locus_tag=C9E95_RS07545;product=class I adenylate cyclase;protein_id=WP_080204063.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 10241 11182 . + . ID=gene-C9E95_RS07550;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=C9E95_RS07550;old_locus_tag=C9E95_07730 NZ_PYJW01000075.1 Protein Homology CDS 10241 11182 . + 0 ID=cds-WP_001521319.1;Parent=gene-C9E95_RS07550;Dbxref=GenBank:WP_001521319.1;Name=WP_001521319.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=C9E95_RS07550;product=hydroxymethylbilane synthase;protein_id=WP_001521319.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 11179 11919 . + . ID=gene-C9E95_RS07555;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=C9E95_RS07555;old_locus_tag=C9E95_07735 NZ_PYJW01000075.1 Protein Homology CDS 11179 11919 . + 0 ID=cds-WP_000025494.1;Parent=gene-C9E95_RS07555;Dbxref=GenBank:WP_000025494.1;Name=WP_000025494.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462823.1;locus_tag=C9E95_RS07555;product=uroporphyrinogen-III synthase;protein_id=WP_000025494.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 11941 13110 . + . ID=gene-C9E95_RS07560;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=C9E95_RS07560;old_locus_tag=C9E95_07740 NZ_PYJW01000075.1 Protein Homology CDS 11941 13110 . + 0 ID=cds-WP_080204064.1;Parent=gene-C9E95_RS07560;Dbxref=GenBank:WP_080204064.1;Name=WP_080204064.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462822.1;locus_tag=C9E95_RS07560;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_080204064.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 13113 14309 . + . ID=gene-C9E95_RS07565;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=C9E95_RS07565;old_locus_tag=C9E95_07745 NZ_PYJW01000075.1 Protein Homology CDS 13113 14309 . + 0 ID=cds-WP_023602562.1;Parent=gene-C9E95_RS07565;Dbxref=GenBank:WP_023602562.1;Name=WP_023602562.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=C9E95_RS07565;product=protoheme IX biogenesis protein HemY;protein_id=WP_023602562.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 14891 14967 . - . ID=gene-C9E95_RS07570;Name=C9E95_RS07570;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS07570;old_locus_tag=C9E95_07750 NZ_PYJW01000075.1 tRNAscan-SE tRNA 14891 14967 . - . ID=rna-C9E95_RS07570;Parent=gene-C9E95_RS07570;anticodon=(pos:complement(14931..14933));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS07570;product=tRNA-Pro NZ_PYJW01000075.1 tRNAscan-SE exon 14891 14967 . - . ID=exon-C9E95_RS07570-1;Parent=rna-C9E95_RS07570;anticodon=(pos:complement(14931..14933));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS07570;product=tRNA-Pro NZ_PYJW01000075.1 RefSeq gene 15010 15096 . - . ID=gene-C9E95_RS07575;Name=C9E95_RS07575;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS07575;old_locus_tag=C9E95_07755 NZ_PYJW01000075.1 tRNAscan-SE tRNA 15010 15096 . - . ID=rna-C9E95_RS07575;Parent=gene-C9E95_RS07575;anticodon=(pos:complement(15060..15062));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS07575;product=tRNA-Leu NZ_PYJW01000075.1 tRNAscan-SE exon 15010 15096 . - . ID=exon-C9E95_RS07575-1;Parent=rna-C9E95_RS07575;anticodon=(pos:complement(15060..15062));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS07575;product=tRNA-Leu NZ_PYJW01000075.1 RefSeq gene 15117 15192 . - . ID=gene-C9E95_RS07580;Name=C9E95_RS07580;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS07580;old_locus_tag=C9E95_07760 NZ_PYJW01000075.1 tRNAscan-SE tRNA 15117 15192 . - . ID=rna-C9E95_RS07580;Parent=gene-C9E95_RS07580;anticodon=(pos:complement(15157..15159));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS07580;product=tRNA-His NZ_PYJW01000075.1 tRNAscan-SE exon 15117 15192 . - . ID=exon-C9E95_RS07580-1;Parent=rna-C9E95_RS07580;anticodon=(pos:complement(15157..15159));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS07580;product=tRNA-His NZ_PYJW01000075.1 RefSeq gene 15247 15323 . - . ID=gene-C9E95_RS07585;Name=C9E95_RS07585;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS07585;old_locus_tag=C9E95_07765 NZ_PYJW01000075.1 tRNAscan-SE tRNA 15247 15323 . - . ID=rna-C9E95_RS07585;Parent=gene-C9E95_RS07585;anticodon=(pos:complement(15287..15289));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS07585;product=tRNA-Arg NZ_PYJW01000075.1 tRNAscan-SE exon 15247 15323 . - . ID=exon-C9E95_RS07585-1;Parent=rna-C9E95_RS07585;anticodon=(pos:complement(15287..15289));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS07585;product=tRNA-Arg NZ_PYJW01000075.1 RefSeq gene 15426 16811 . - . ID=gene-C9E95_RS07590;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=C9E95_RS07590;old_locus_tag=C9E95_07770 NZ_PYJW01000075.1 Protein Homology CDS 15426 16811 . - 0 ID=cds-WP_000818378.1;Parent=gene-C9E95_RS07590;Dbxref=GenBank:WP_000818378.1;Name=WP_000818378.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462820.1;locus_tag=C9E95_RS07590;product=bifunctional threonine/serine APC transporter ThrP;protein_id=WP_000818378.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 17018 17758 . - . ID=gene-C9E95_RS07595;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=C9E95_RS07595;old_locus_tag=C9E95_07775 NZ_PYJW01000075.1 Protein Homology CDS 17018 17758 . - 0 ID=cds-WP_080204065.1;Parent=gene-C9E95_RS07595;Dbxref=GenBank:WP_080204065.1;Name=WP_080204065.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462819.1;locus_tag=C9E95_RS07595;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_080204065.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 17755 19113 . - . ID=gene-C9E95_RS07600;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=C9E95_RS07600;old_locus_tag=C9E95_07780 NZ_PYJW01000075.1 Protein Homology CDS 17755 19113 . - 0 ID=cds-WP_000055605.1;Parent=gene-C9E95_RS07600;Dbxref=GenBank:WP_000055605.1;Name=WP_000055605.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462818.1;locus_tag=C9E95_RS07600;product=ECA oligosaccharide polymerase;protein_id=WP_000055605.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 19110 20189 . - . ID=gene-C9E95_RS07605;Name=C9E95_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07605;old_locus_tag=C9E95_07785 NZ_PYJW01000075.1 Protein Homology CDS 19110 20189 . - 0 ID=cds-WP_080204066.1;Parent=gene-C9E95_RS07605;Dbxref=GenBank:WP_080204066.1;Name=WP_080204066.1;Ontology_term=GO:0036065,GO:0008417;gbkey=CDS;go_function=fucosyltransferase activity|0008417||IEA;go_process=fucosylation|0036065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462817.1;locus_tag=C9E95_RS07605;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_080204066.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 20186 21436 . - . ID=gene-C9E95_RS07610;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=C9E95_RS07610;old_locus_tag=C9E95_07790 NZ_PYJW01000075.1 Protein Homology CDS 20186 21436 . - 0 ID=cds-WP_000050285.1;Parent=gene-C9E95_RS07610;Dbxref=GenBank:WP_000050285.1;Name=WP_000050285.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462816.1;locus_tag=C9E95_RS07610;product=lipid III flippase WzxE;protein_id=WP_000050285.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 21438 22568 . - . ID=gene-C9E95_RS07615;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=C9E95_RS07615;old_locus_tag=C9E95_07795 NZ_PYJW01000075.1 Protein Homology CDS 21438 22568 . - 0 ID=cds-WP_000612080.1;Parent=gene-C9E95_RS07615;Dbxref=GenBank:WP_000612080.1;Name=WP_000612080.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462815.1;locus_tag=C9E95_RS07615;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_000612080.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 22573 23250 . - . ID=gene-C9E95_RS07620;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=C9E95_RS07620;old_locus_tag=C9E95_07800 NZ_PYJW01000075.1 Protein Homology CDS 22573 23250 . - 0 ID=cds-WP_165450964.1;Parent=gene-C9E95_RS07620;Dbxref=GenBank:WP_165450964.1;Name=WP_165450964.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=C9E95_RS07620;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_165450964.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 23228 24109 . - . ID=gene-C9E95_RS07625;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=C9E95_RS07625;old_locus_tag=C9E95_07805 NZ_PYJW01000075.1 Protein Homology CDS 23228 24109 . - 0 ID=cds-WP_000676077.1;Parent=gene-C9E95_RS07625;Dbxref=GenBank:WP_000676077.1;Name=WP_000676077.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=C9E95_RS07625;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_000676077.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 24142 25209 . - . ID=gene-C9E95_RS07630;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=C9E95_RS07630;old_locus_tag=C9E95_07810 NZ_PYJW01000075.1 Protein Homology CDS 24142 25209 . - 0 ID=cds-WP_000822143.1;Parent=gene-C9E95_RS07630;Dbxref=GenBank:WP_000822143.1;Name=WP_000822143.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462812.1;locus_tag=C9E95_RS07630;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_000822143.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 25209 26471 . - . ID=gene-C9E95_RS07635;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=C9E95_RS07635;old_locus_tag=C9E95_07815 NZ_PYJW01000075.1 Protein Homology CDS 25209 26471 . - 0 ID=cds-WP_001653978.1;Parent=gene-C9E95_RS07635;Dbxref=GenBank:WP_001653978.1;Name=WP_001653978.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462811.1;locus_tag=C9E95_RS07635;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_001653978.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 26468 27598 . - . ID=gene-C9E95_RS07640;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=C9E95_RS07640;old_locus_tag=C9E95_07820 NZ_PYJW01000075.1 Protein Homology CDS 26468 27598 . - 0 ID=cds-WP_000866685.1;Parent=gene-C9E95_RS07640;Dbxref=GenBank:WP_000866685.1;Name=WP_000866685.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462810.1;locus_tag=C9E95_RS07640;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_000866685.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 27654 28700 . - . ID=gene-C9E95_RS07645;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=C9E95_RS07645;old_locus_tag=C9E95_07825 NZ_PYJW01000075.1 Protein Homology CDS 27654 28700 . - 0 ID=cds-WP_000193420.1;Parent=gene-C9E95_RS07645;Dbxref=GenBank:WP_000193420.1;Name=WP_000193420.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462809.1;locus_tag=C9E95_RS07645;product=ECA polysaccharide chain length modulation protein;protein_id=WP_000193420.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 28712 29815 . - . ID=gene-C9E95_RS07650;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=C9E95_RS07650;old_locus_tag=C9E95_07830 NZ_PYJW01000075.1 Protein Homology CDS 28712 29815 . - 0 ID=cds-WP_001050948.1;Parent=gene-C9E95_RS07650;Dbxref=GenBank:WP_001050948.1;Name=WP_001050948.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418231.1;locus_tag=C9E95_RS07650;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_001050948.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 30055 31314 . - . ID=gene-C9E95_RS07660;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=C9E95_RS07660;old_locus_tag=C9E95_07840 NZ_PYJW01000075.1 Protein Homology CDS 30055 31314 . - 0 ID=cds-WP_001054532.1;Parent=gene-C9E95_RS07660;Dbxref=GenBank:WP_001054532.1;Name=WP_001054532.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=C9E95_RS07660;product=transcription termination factor Rho;protein_id=WP_001054532.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 31402 31485 . - . ID=gene-C9E95_RS23440;Name=C9E95_RS23440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23440 NZ_PYJW01000075.1 Protein Homology CDS 31402 31485 . - 0 ID=cds-WP_134820045.1;Parent=gene-C9E95_RS23440;Dbxref=GenBank:WP_134820045.1;Name=WP_134820045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=C9E95_RS23440;product=rho operon leader peptide;protein_id=WP_134820045.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 31733 32062 . - . ID=gene-C9E95_RS07670;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=C9E95_RS07670;old_locus_tag=C9E95_07850 NZ_PYJW01000075.1 Protein Homology CDS 31733 32062 . - 0 ID=cds-WP_001280776.1;Parent=gene-C9E95_RS07670;Dbxref=GenBank:WP_001280776.1;Name=WP_001280776.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=C9E95_RS07670;product=thioredoxin TrxA;protein_id=WP_001280776.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 32206 33471 . + . ID=gene-C9E95_RS07675;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=C9E95_RS07675;old_locus_tag=C9E95_07855 NZ_PYJW01000075.1 Protein Homology CDS 32206 33471 . + 0 ID=cds-WP_000047525.1;Parent=gene-C9E95_RS07675;Dbxref=GenBank:WP_000047525.1;Name=WP_000047525.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462805.1;locus_tag=C9E95_RS07675;product=ATP-dependent RNA helicase RhlB;protein_id=WP_000047525.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 33590 35071 . + . ID=gene-C9E95_RS07680;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=C9E95_RS07680;old_locus_tag=C9E95_07865 NZ_PYJW01000075.1 Protein Homology CDS 33590 35071 . + 0 ID=cds-WP_001089447.1;Parent=gene-C9E95_RS07680;Dbxref=GenBank:WP_001089447.1;Name=WP_001089447.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462804.1;locus_tag=C9E95_RS07680;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_001089447.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 35111 37135 . - . ID=gene-C9E95_RS07685;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=C9E95_RS07685;old_locus_tag=C9E95_07870 NZ_PYJW01000075.1 Protein Homology CDS 35111 37135 . - 0 ID=cds-WP_001238842.1;Parent=gene-C9E95_RS07685;Dbxref=GenBank:WP_001238842.1;Name=WP_001238842.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462803.1;locus_tag=C9E95_RS07685;product=DNA helicase Rep;protein_id=WP_001238842.1;transl_table=11 NZ_PYJW01000075.1 RefSeq pseudogene 37235 37372 . - . ID=gene-C9E95_RS07690;Name=C9E95_RS07690;end_range=37372,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS07690;old_locus_tag=C9E95_07875;partial=true;pseudo=true NZ_PYJW01000075.1 Protein Homology CDS 37235 37372 . - 0 ID=cds-C9E95_RS07690;Parent=gene-C9E95_RS07690;Note=involved in nicotinamide riboside transport%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=37372,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506088.1;locus_tag=C9E95_RS07690;partial=true;product=nicotinamide riboside transporter PnuC;pseudo=true;transl_table=11 NZ_PYJW01000075.1 RefSeq pseudogene 37324 37479 . - . ID=gene-C9E95_RS23650;Name=C9E95_RS23650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23650;partial=true;pseudo=true;start_range=.,37324 NZ_PYJW01000075.1 Protein Homology CDS 37324 37479 . - 0 ID=cds-C9E95_RS23650;Parent=gene-C9E95_RS23650;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442089.1;locus_tag=C9E95_RS23650;partial=true;product=Crp/Fnr family transcriptional regulator;pseudo=true;start_range=.,37324;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 37673 37954 . + . ID=gene-C9E95_RS07700;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=C9E95_RS07700;old_locus_tag=C9E95_07885 NZ_PYJW01000075.1 Protein Homology CDS 37673 37954 . + 0 ID=cds-WP_001096806.1;Parent=gene-C9E95_RS07700;Dbxref=GenBank:WP_001096806.1;Name=WP_001096806.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462801.1;locus_tag=C9E95_RS07700;product=peptidylprolyl isomerase PpiC;protein_id=WP_001096806.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 38049 39524 . - . ID=gene-C9E95_RS07705;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=C9E95_RS07705;old_locus_tag=C9E95_07890 NZ_PYJW01000075.1 Protein Homology CDS 38049 39524 . - 0 ID=cds-WP_000024943.1;Parent=gene-C9E95_RS07705;Dbxref=GenBank:WP_000024943.1;Name=WP_000024943.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=C9E95_RS07705;product=ketol-acid reductoisomerase;protein_id=WP_000024943.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 39689 40576 . + . ID=gene-C9E95_RS07710;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=C9E95_RS07710;old_locus_tag=C9E95_07895 NZ_PYJW01000075.1 Protein Homology CDS 39689 40576 . + 0 ID=cds-WP_000365798.1;Parent=gene-C9E95_RS07710;Dbxref=GenBank:WP_000365798.1;Name=WP_000365798.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462799.1;locus_tag=C9E95_RS07710;product=HTH-type transcriptional activator IlvY;protein_id=WP_000365798.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 40579 40920 . - . ID=gene-C9E95_RS07715;Name=C9E95_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07715;old_locus_tag=C9E95_07900 NZ_PYJW01000075.1 Protein Homology CDS 40579 40920 . - 0 ID=cds-WP_000560824.1;Parent=gene-C9E95_RS07715;Dbxref=GenBank:WP_000560824.1;Name=WP_000560824.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462798.1;locus_tag=C9E95_RS07715;product=helix-turn-helix domain-containing protein;protein_id=WP_000560824.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 40917 41234 . - . ID=gene-C9E95_RS07720;Name=C9E95_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07720;old_locus_tag=C9E95_07905 NZ_PYJW01000075.1 Protein Homology CDS 40917 41234 . - 0 ID=cds-WP_023994053.1;Parent=gene-C9E95_RS07720;Dbxref=GenBank:WP_023994053.1;Name=WP_023994053.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462797.1;locus_tag=C9E95_RS07720;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_023994053.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 41516 43060 . - . ID=gene-C9E95_RS07725;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=C9E95_RS07725;old_locus_tag=C9E95_07910 NZ_PYJW01000075.1 Protein Homology CDS 41516 43060 . - 0 ID=cds-WP_001518457.1;Parent=gene-C9E95_RS07725;Dbxref=GenBank:WP_001518457.1;Name=WP_001518457.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462796.1;locus_tag=C9E95_RS07725;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_001518457.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 43063 44913 . - . ID=gene-C9E95_RS07730;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=C9E95_RS07730;old_locus_tag=C9E95_07915 NZ_PYJW01000075.1 Protein Homology CDS 43063 44913 . - 0 ID=cds-WP_001127429.1;Parent=gene-C9E95_RS07730;Dbxref=GenBank:WP_001127429.1;Name=WP_001127429.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=C9E95_RS07730;product=dihydroxy-acid dehydratase;protein_id=WP_001127429.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 45073 46002 . - . ID=gene-C9E95_RS07735;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=C9E95_RS07735;old_locus_tag=C9E95_07920 NZ_PYJW01000075.1 Protein Homology CDS 45073 46002 . - 0 ID=cds-WP_000208532.1;Parent=gene-C9E95_RS07735;Dbxref=GenBank:WP_000208532.1;Name=WP_000208532.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462794.1;locus_tag=C9E95_RS07735;product=branched-chain-amino-acid transaminase;protein_id=WP_000208532.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 46020 46283 . - . ID=gene-C9E95_RS07740;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=C9E95_RS07740;old_locus_tag=C9E95_07925 NZ_PYJW01000075.1 Protein Homology CDS 46020 46283 . - 0 ID=cds-WP_000983260.1;Parent=gene-C9E95_RS07740;Dbxref=GenBank:WP_000983260.1;Name=WP_000983260.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=C9E95_RS07740;product=acetolactate synthase 2 small subunit;protein_id=WP_000983260.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 46280 47926 . - . ID=gene-C9E95_RS07745;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=C9E95_RS07745;old_locus_tag=C9E95_07930 NZ_PYJW01000075.1 Protein Homology CDS 46280 47926 . - 0 ID=cds-WP_001012555.1;Parent=gene-C9E95_RS07745;Dbxref=GenBank:WP_001012555.1;Name=WP_001012555.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=C9E95_RS07745;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_001012555.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 47929 47979 . - . ID=gene-C9E95_RS23265;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=C9E95_RS23265 NZ_PYJW01000075.1 Protein Homology CDS 47929 47979 . - 0 ID=cds-WP_192930503.1;Parent=gene-C9E95_RS23265;Dbxref=GenBank:WP_192930503.1;Name=WP_192930503.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: protein motif:HMM:NF038286.1;locus_tag=C9E95_RS23265;product=peptide IlvX;protein_id=WP_192930503.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 48066 48164 . - . ID=gene-C9E95_RS07750;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=C9E95_RS07750;old_locus_tag=C9E95_07935 NZ_PYJW01000075.1 Protein Homology CDS 48066 48164 . - 0 ID=cds-WP_001311244.1;Parent=gene-C9E95_RS07750;Dbxref=GenBank:WP_001311244.1;Name=WP_001311244.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=C9E95_RS07750;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 48516 50036 . + . ID=gene-C9E95_RS07760;Name=C9E95_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07760;old_locus_tag=C9E95_07940 NZ_PYJW01000075.1 Protein Homology CDS 48516 50036 . + 0 ID=cds-WP_023994477.1;Parent=gene-C9E95_RS07760;Dbxref=GenBank:WP_023994477.1;Name=WP_023994477.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=C9E95_RS07760;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_023994477.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 50061 50399 . - . ID=gene-C9E95_RS07765;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=C9E95_RS07765;old_locus_tag=C9E95_07945 NZ_PYJW01000075.1 Protein Homology CDS 50061 50399 . - 0 ID=cds-WP_000840996.1;Parent=gene-C9E95_RS07765;Dbxref=GenBank:WP_000840996.1;Name=WP_000840996.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462789.1;locus_tag=C9E95_RS07765;product=macrodomain Ori organization protein MaoP;protein_id=WP_000840996.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 50506 51354 . + . ID=gene-C9E95_RS07770;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=C9E95_RS07770;old_locus_tag=C9E95_07950 NZ_PYJW01000075.1 Protein Homology CDS 50506 51354 . + 0 ID=cds-WP_001541181.1;Parent=gene-C9E95_RS07770;Dbxref=GenBank:WP_001541181.1;Name=WP_001541181.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462788.3;locus_tag=C9E95_RS07770;product=HTH-type transcriptional regulator HdfR;protein_id=WP_001541181.1;transl_table=11 NZ_PYJW01000075.1 RefSeq gene 51455 51530 . - . ID=gene-C9E95_RS07775;Name=C9E95_RS07775;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS07775;old_locus_tag=C9E95_07955 NZ_PYJW01000075.1 tRNAscan-SE tRNA 51455 51530 . - . ID=rna-C9E95_RS07775;Parent=gene-C9E95_RS07775;anticodon=(pos:complement(51495..51497));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS07775;product=tRNA-Trp NZ_PYJW01000075.1 tRNAscan-SE exon 51455 51530 . - . ID=exon-C9E95_RS07775-1;Parent=rna-C9E95_RS07775;anticodon=(pos:complement(51495..51497));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS07775;product=tRNA-Trp NZ_PYJW01000075.1 RefSeq gene 51539 51615 . - . ID=gene-C9E95_RS07780;Name=C9E95_RS07780;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS07780;old_locus_tag=C9E95_07960 NZ_PYJW01000075.1 tRNAscan-SE tRNA 51539 51615 . - . ID=rna-C9E95_RS07780;Parent=gene-C9E95_RS07780;anticodon=(pos:complement(51579..51581));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS07780;product=tRNA-Asp NZ_PYJW01000075.1 tRNAscan-SE exon 51539 51615 . - . ID=exon-C9E95_RS07780-1;Parent=rna-C9E95_RS07780;anticodon=(pos:complement(51579..51581));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS07780;product=tRNA-Asp NZ_PYJW01000075.1 RefSeq gene 51669 51784 . - . ID=gene-C9E95_RS07785;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9E95_RS07785;old_locus_tag=C9E95_07965 NZ_PYJW01000075.1 cmsearch rRNA 51669 51784 . - . ID=rna-C9E95_RS07785;Parent=gene-C9E95_RS07785;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS07785;product=5S ribosomal RNA NZ_PYJW01000075.1 cmsearch exon 51669 51784 . - . ID=exon-C9E95_RS07785-1;Parent=rna-C9E95_RS07785;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS07785;product=5S ribosomal RNA ##sequence-region NZ_PYJW01000143.1 1 146988 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000143.1 RefSeq region 1 146988 . + . ID=NZ_PYJW01000143.1:1..146988;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000143.1 RefSeq gene 170 532 . + . ID=gene-C9E95_RS16435;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=C9E95_RS16435;old_locus_tag=C9E95_16835 NZ_PYJW01000143.1 Protein Homology CDS 170 532 . + 0 ID=cds-WP_001248993.1;Parent=gene-C9E95_RS16435;Dbxref=GenBank:WP_001248993.1;Name=WP_001248993.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460237.1;locus_tag=C9E95_RS16435;product=DUF1971 domain-containing protein YeaR;protein_id=WP_001248993.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 535 717 . + . ID=gene-C9E95_RS16440;Name=C9E95_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16440;old_locus_tag=C9E95_16840 NZ_PYJW01000143.1 Protein Homology CDS 535 717 . + 0 ID=cds-WP_000513733.1;Parent=gene-C9E95_RS16440;Dbxref=GenBank:WP_000513733.1;Name=WP_000513733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460238.1;locus_tag=C9E95_RS16440;product=DUF1869 domain-containing protein;protein_id=WP_000513733.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 947 1588 . + . ID=gene-C9E95_RS16445;Name=C9E95_RS16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16445;old_locus_tag=C9E95_16845 NZ_PYJW01000143.1 Protein Homology CDS 947 1588 . + 0 ID=cds-WP_001669273.1;Parent=gene-C9E95_RS16445;Dbxref=GenBank:WP_001669273.1;Name=WP_001669273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460239.1;locus_tag=C9E95_RS16445;product=hypothetical protein;protein_id=WP_001669273.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 1902 2150 . + . ID=gene-C9E95_RS16455;Name=C9E95_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16455;old_locus_tag=C9E95_16855 NZ_PYJW01000143.1 Protein Homology CDS 1902 2150 . + 0 ID=cds-WP_000512149.1;Parent=gene-C9E95_RS16455;Dbxref=GenBank:WP_000512149.1;Name=WP_000512149.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460240.1;locus_tag=C9E95_RS16455;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000512149.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 2289 2387 . - . ID=gene-C9E95_RS16460;Name=C9E95_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16460;old_locus_tag=C9E95_16860 NZ_PYJW01000143.1 Protein Homology CDS 2289 2387 . - 0 ID=cds-WP_001589065.1;Parent=gene-C9E95_RS16460;Dbxref=GenBank:WP_001589065.1;Name=WP_001589065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=C9E95_RS16460;product=YoaK family small membrane protein;protein_id=WP_001589065.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 2583 2834 . + . ID=gene-C9E95_RS16465;Name=C9E95_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16465;old_locus_tag=C9E95_16865 NZ_PYJW01000143.1 Protein Homology CDS 2583 2834 . + 0 ID=cds-WP_000673492.1;Parent=gene-C9E95_RS16465;Dbxref=GenBank:WP_000673492.1;Name=WP_000673492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460241.1;locus_tag=C9E95_RS16465;product=putative hemolysin;protein_id=WP_000673492.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 2903 3214 . + . ID=gene-C9E95_RS16470;Name=C9E95_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16470;old_locus_tag=C9E95_16870 NZ_PYJW01000143.1 Protein Homology CDS 2903 3214 . + 0 ID=cds-WP_000487129.1;Parent=gene-C9E95_RS16470;Dbxref=GenBank:WP_000487129.1;Name=WP_000487129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460242.1;locus_tag=C9E95_RS16470;product=hypothetical protein;protein_id=WP_000487129.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 3200 3547 . - . ID=gene-C9E95_RS16475;Name=C9E95_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16475;old_locus_tag=C9E95_16875 NZ_PYJW01000143.1 Protein Homology CDS 3200 3547 . - 0 ID=cds-WP_001222527.1;Parent=gene-C9E95_RS16475;Dbxref=GenBank:WP_001222527.1;Name=WP_001222527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460243.1;locus_tag=C9E95_RS16475;product=DUF488 domain-containing protein;protein_id=WP_001222527.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 3666 4850 . - . ID=gene-C9E95_RS16480;Name=C9E95_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16480;old_locus_tag=C9E95_16880 NZ_PYJW01000143.1 Protein Homology CDS 3666 4850 . - 0 ID=cds-WP_023138644.1;Parent=gene-C9E95_RS16480;Dbxref=GenBank:WP_023138644.1;Name=WP_023138644.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460244.1;locus_tag=C9E95_RS16480;product=CynX/NimT family MFS transporter;protein_id=WP_023138644.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 4951 5745 . + . ID=gene-C9E95_RS16485;Name=C9E95_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16485;old_locus_tag=C9E95_16885 NZ_PYJW01000143.1 Protein Homology CDS 4951 5745 . + 0 ID=cds-WP_080219642.1;Parent=gene-C9E95_RS16485;Dbxref=GenBank:WP_080219642.1;Name=WP_080219642.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460245.1;locus_tag=C9E95_RS16485;product=AraC family transcriptional regulator;protein_id=WP_080219642.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 5725 6171 . - . ID=gene-C9E95_RS16490;Name=C9E95_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16490;old_locus_tag=C9E95_16890 NZ_PYJW01000143.1 Protein Homology CDS 5725 6171 . - 0 ID=cds-WP_000460698.1;Parent=gene-C9E95_RS16490;Dbxref=GenBank:WP_000460698.1;Name=WP_000460698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460246.2;locus_tag=C9E95_RS16490;product=DUF441 domain-containing protein;protein_id=WP_000460698.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 6377 6484 . + . ID=gene-C9E95_RS16495;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=C9E95_RS16495;old_locus_tag=C9E95_16895 NZ_PYJW01000143.1 Protein Homology CDS 6377 6484 . + 0 ID=cds-WP_000272237.1;Parent=gene-C9E95_RS16495;Dbxref=GenBank:WP_000272237.1;Name=WP_000272237.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460247.1;locus_tag=C9E95_RS16495;product=small membrane protein YoaI;protein_id=WP_000272237.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 6481 6999 . - . ID=gene-C9E95_RS16500;Name=C9E95_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16500;old_locus_tag=C9E95_16900 NZ_PYJW01000143.1 Protein Homology CDS 6481 6999 . - 0 ID=cds-WP_165450959.1;Parent=gene-C9E95_RS16500;Dbxref=GenBank:WP_165450959.1;Name=WP_165450959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460248.1;locus_tag=C9E95_RS16500;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_165450959.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 7049 8542 . - . ID=gene-C9E95_RS16505;Name=dgcJ;gbkey=Gene;gene=dgcJ;gene_biotype=protein_coding;locus_tag=C9E95_RS16505;old_locus_tag=C9E95_16905 NZ_PYJW01000143.1 Protein Homology CDS 7049 8542 . - 0 ID=cds-WP_080219640.1;Parent=gene-C9E95_RS16505;Dbxref=GenBank:WP_080219640.1;Name=WP_080219640.1;Ontology_term=GO:0043709,GO:1902201,GO:0052621;gbkey=CDS;gene=dgcJ;go_function=diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA,negative regulation of bacterial-type flagellum-dependent cell motility|1902201||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460249.1;locus_tag=C9E95_RS16505;product=diguanylate cyclase DgcJ;protein_id=WP_080219640.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 8836 9033 . + . ID=gene-C9E95_RS16510;Name=C9E95_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16510;old_locus_tag=C9E95_16910 NZ_PYJW01000143.1 GeneMarkS-2+ CDS 8836 9033 . + 0 ID=cds-WP_001805136.1;Parent=gene-C9E95_RS16510;Dbxref=GenBank:WP_001805136.1;Name=WP_001805136.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS16510;product=hypothetical protein;protein_id=WP_001805136.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 9183 10469 . - . ID=gene-C9E95_RS16515;Name=C9E95_RS16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16515;old_locus_tag=C9E95_16915 NZ_PYJW01000143.1 Protein Homology CDS 9183 10469 . - 0 ID=cds-WP_079950397.1;Parent=gene-C9E95_RS16515;Dbxref=GenBank:WP_079950397.1;Name=WP_079950397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460250.1;locus_tag=C9E95_RS16515;product=YeaH/YhbH family protein;protein_id=WP_079950397.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 10592 12526 . - . ID=gene-C9E95_RS16520;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=C9E95_RS16520;old_locus_tag=C9E95_16920 NZ_PYJW01000143.1 Protein Homology CDS 10592 12526 . - 0 ID=cds-WP_001518010.1;Parent=gene-C9E95_RS16520;Dbxref=GenBank:WP_001518010.1;Name=WP_001518010.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=C9E95_RS16520;product=protein kinase YeaG;protein_id=WP_001518010.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 12952 13698 . + . ID=gene-C9E95_RS16525;Name=C9E95_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16525;old_locus_tag=C9E95_16925 NZ_PYJW01000143.1 Protein Homology CDS 12952 13698 . + 0 ID=cds-WP_000163762.1;Parent=gene-C9E95_RS16525;Dbxref=GenBank:WP_000163762.1;Name=WP_000163762.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460252.1;locus_tag=C9E95_RS16525;product=MipA/OmpV family protein;protein_id=WP_000163762.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 13988 15184 . + . ID=gene-C9E95_RS16530;Name=C9E95_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16530;old_locus_tag=C9E95_16930 NZ_PYJW01000143.1 Protein Homology CDS 13988 15184 . + 0 ID=cds-WP_000029247.1;Parent=gene-C9E95_RS16530;Dbxref=GenBank:WP_000029247.1;Name=WP_000029247.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460253.1;locus_tag=C9E95_RS16530;product=anaerobic sulfatase maturase;protein_id=WP_000029247.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 15281 16138 . + . ID=gene-C9E95_RS16535;Name=C9E95_RS16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16535;old_locus_tag=C9E95_16935 NZ_PYJW01000143.1 Protein Homology CDS 15281 16138 . + 0 ID=cds-WP_000843751.1;Parent=gene-C9E95_RS16535;Dbxref=GenBank:WP_000843751.1;Name=WP_000843751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460254.1;locus_tag=C9E95_RS16535;product=aldo/keto reductase;protein_id=WP_000843751.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 16237 17121 . - . ID=gene-C9E95_RS16540;Name=C9E95_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16540;old_locus_tag=C9E95_16940 NZ_PYJW01000143.1 Protein Homology CDS 16237 17121 . - 0 ID=cds-WP_000608660.1;Parent=gene-C9E95_RS16540;Dbxref=GenBank:WP_000608660.1;Name=WP_000608660.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=C9E95_RS16540;product=D-hexose-6-phosphate mutarotase;protein_id=WP_000608660.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 17456 18451 . - . ID=gene-C9E95_RS16550;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=C9E95_RS16550;old_locus_tag=C9E95_16950 NZ_PYJW01000143.1 Protein Homology CDS 17456 18451 . - 0 ID=cds-WP_000153505.1;Parent=gene-C9E95_RS16550;Dbxref=GenBank:WP_000153505.1;Name=WP_000153505.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=C9E95_RS16550;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153505.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 18793 19206 . + . ID=gene-C9E95_RS16555;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=C9E95_RS16555;old_locus_tag=C9E95_16955 NZ_PYJW01000143.1 Protein Homology CDS 18793 19206 . + 0 ID=cds-WP_001519539.1;Parent=gene-C9E95_RS16555;Dbxref=GenBank:WP_001519539.1;Name=WP_001519539.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=C9E95_RS16555;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_001519539.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 19248 19526 . + . ID=gene-C9E95_RS16560;Name=C9E95_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16560;old_locus_tag=C9E95_16960 NZ_PYJW01000143.1 Protein Homology CDS 19248 19526 . + 0 ID=cds-WP_001046864.1;Parent=gene-C9E95_RS16560;Dbxref=GenBank:WP_001046864.1;Name=WP_001046864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460258.1;locus_tag=C9E95_RS16560;product=YeaC family protein;protein_id=WP_001046864.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 19878 20534 . - . ID=gene-C9E95_RS16565;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=C9E95_RS16565;old_locus_tag=C9E95_16965 NZ_PYJW01000143.1 Protein Homology CDS 19878 20534 . - 0 ID=cds-WP_000184707.1;Parent=gene-C9E95_RS16565;Dbxref=GenBank:WP_000184707.1;Name=WP_000184707.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460259.1;locus_tag=C9E95_RS16565;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_000184707.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 20561 21577 . - . ID=gene-C9E95_RS16570;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=C9E95_RS16570;old_locus_tag=C9E95_16970 NZ_PYJW01000143.1 Protein Homology CDS 20561 21577 . - 0 ID=cds-WP_001170136.1;Parent=gene-C9E95_RS16570;Dbxref=GenBank:WP_001170136.1;Name=WP_001170136.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460260.1;locus_tag=C9E95_RS16570;product=asparaginase;protein_id=WP_001170136.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 21673 23529 . - . ID=gene-C9E95_RS16575;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=C9E95_RS16575;old_locus_tag=C9E95_16975 NZ_PYJW01000143.1 Protein Homology CDS 21673 23529 . - 0 ID=cds-WP_080219639.1;Parent=gene-C9E95_RS16575;Dbxref=GenBank:WP_080219639.1;Name=WP_080219639.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460261.1;locus_tag=C9E95_RS16575;product=signal peptide peptidase SppA;protein_id=WP_080219639.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 23703 24254 . + . ID=gene-C9E95_RS16580;Name=C9E95_RS16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16580;old_locus_tag=C9E95_16980 NZ_PYJW01000143.1 Protein Homology CDS 23703 24254 . + 0 ID=cds-WP_000339313.1;Parent=gene-C9E95_RS16580;Dbxref=GenBank:WP_000339313.1;Name=WP_000339313.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460262.1;locus_tag=C9E95_RS16580;product=NAD(P)H nitroreductase;protein_id=WP_000339313.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 24372 25415 . + . ID=gene-C9E95_RS16585;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=C9E95_RS16585;old_locus_tag=C9E95_16985 NZ_PYJW01000143.1 Protein Homology CDS 24372 25415 . + 0 ID=cds-WP_001294900.1;Parent=gene-C9E95_RS16585;Dbxref=GenBank:WP_001294900.1;Name=WP_001294900.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460263.1;locus_tag=C9E95_RS16585;product=selenide%2C water dikinase SelD;protein_id=WP_001294900.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 25420 27369 . + . ID=gene-C9E95_RS16590;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=C9E95_RS16590;old_locus_tag=C9E95_16990 NZ_PYJW01000143.1 Protein Homology CDS 25420 27369 . + 0 ID=cds-WP_001235863.1;Parent=gene-C9E95_RS16590;Dbxref=GenBank:WP_001235863.1;Name=WP_001235863.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460264.1;locus_tag=C9E95_RS16590;product=DNA topoisomerase III;protein_id=WP_001235863.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 27399 28742 . - . ID=gene-C9E95_RS16595;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=C9E95_RS16595;old_locus_tag=C9E95_16995 NZ_PYJW01000143.1 Protein Homology CDS 27399 28742 . - 0 ID=cds-WP_000372865.1;Parent=gene-C9E95_RS16595;Dbxref=GenBank:WP_000372865.1;Name=WP_000372865.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460265.1;locus_tag=C9E95_RS16595;product=NADP-specific glutamate dehydrogenase;protein_id=WP_000372865.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 28981 29256 . + . ID=gene-C9E95_RS16600;Name=C9E95_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16600;old_locus_tag=C9E95_17000 NZ_PYJW01000143.1 Protein Homology CDS 28981 29256 . + 0 ID=cds-WP_000336847.1;Parent=gene-C9E95_RS16600;Dbxref=GenBank:WP_000336847.1;Name=WP_000336847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465441.1;locus_tag=C9E95_RS16600;product=YnjH family protein;protein_id=WP_000336847.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 29216 29632 . - . ID=gene-C9E95_RS16605;Name=C9E95_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16605;old_locus_tag=C9E95_17005 NZ_PYJW01000143.1 Protein Homology CDS 29216 29632 . - 0 ID=cds-WP_000592136.1;Parent=gene-C9E95_RS16605;Dbxref=GenBank:WP_000592136.1;Name=WP_000592136.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460267.1;locus_tag=C9E95_RS16605;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WP_000592136.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 29705 30511 . - . ID=gene-C9E95_RS16610;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=C9E95_RS16610;old_locus_tag=C9E95_17010 NZ_PYJW01000143.1 Protein Homology CDS 29705 30511 . - 0 ID=cds-WP_080219638.1;Parent=gene-C9E95_RS16610;Dbxref=GenBank:WP_080219638.1;Name=WP_080219638.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460268.1;locus_tag=C9E95_RS16610;product=exodeoxyribonuclease III;protein_id=WP_080219638.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 30957 32183 . + . ID=gene-C9E95_RS16615;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;locus_tag=C9E95_RS16615;old_locus_tag=C9E95_17020 NZ_PYJW01000143.1 Protein Homology CDS 30957 32183 . + 0 ID=cds-WP_001534648.1;Parent=gene-C9E95_RS16615;Dbxref=GenBank:WP_001534648.1;Name=WP_001534648.1;gbkey=CDS;gene=astC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460269.1;locus_tag=C9E95_RS16615;product=succinylornithine/acetylornithine transaminase;protein_id=WP_001534648.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 32174 33208 . + . ID=gene-C9E95_RS16620;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=C9E95_RS16620;old_locus_tag=C9E95_17025 NZ_PYJW01000143.1 Protein Homology CDS 32174 33208 . + 0 ID=cds-WP_001263889.1;Parent=gene-C9E95_RS16620;Dbxref=GenBank:WP_001263889.1;Name=WP_001263889.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460270.1;locus_tag=C9E95_RS16620;product=arginine N-succinyltransferase;protein_id=WP_001263889.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 33205 34683 . + . ID=gene-C9E95_RS16625;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=C9E95_RS16625;old_locus_tag=C9E95_17030 NZ_PYJW01000143.1 Protein Homology CDS 33205 34683 . + 0 ID=cds-WP_039590667.1;Parent=gene-C9E95_RS16625;Dbxref=GenBank:WP_039590667.1;Name=WP_039590667.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460271.1;locus_tag=C9E95_RS16625;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_039590667.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 34680 36023 . + . ID=gene-C9E95_RS16630;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=C9E95_RS16630;old_locus_tag=C9E95_17035 NZ_PYJW01000143.1 Protein Homology CDS 34680 36023 . + 0 ID=cds-WP_000123947.1;Parent=gene-C9E95_RS16630;Dbxref=GenBank:WP_000123947.1;Name=WP_000123947.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460272.1;locus_tag=C9E95_RS16630;product=N-succinylarginine dihydrolase;protein_id=WP_000123947.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 36016 36984 . + . ID=gene-C9E95_RS16635;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=C9E95_RS16635;old_locus_tag=C9E95_17040 NZ_PYJW01000143.1 Protein Homology CDS 36016 36984 . + 0 ID=cds-WP_000368462.1;Parent=gene-C9E95_RS16635;Dbxref=GenBank:WP_000368462.1;Name=WP_000368462.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460273.1;locus_tag=C9E95_RS16635;product=succinylglutamate desuccinylase;protein_id=WP_000368462.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 37320 37805 . + . ID=gene-C9E95_RS16640;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=C9E95_RS16640;old_locus_tag=C9E95_17050 NZ_PYJW01000143.1 Protein Homology CDS 37320 37805 . + 0 ID=cds-WP_001229001.1;Parent=gene-C9E95_RS16640;Dbxref=GenBank:WP_001229001.1;Name=WP_001229001.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460274.1;locus_tag=C9E95_RS16640;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_001229001.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 37880 38761 . - . ID=gene-C9E95_RS16645;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=C9E95_RS16645;old_locus_tag=C9E95_17055 NZ_PYJW01000143.1 Protein Homology CDS 37880 38761 . - 0 ID=cds-WP_001526281.1;Parent=gene-C9E95_RS16645;Dbxref=GenBank:WP_001526281.1;Name=WP_001526281.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233065.1;locus_tag=C9E95_RS16645;product=excinuclease Cho;protein_id=WP_001526281.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 38882 39709 . - . ID=gene-C9E95_RS16650;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=C9E95_RS16650;old_locus_tag=C9E95_17060 NZ_PYJW01000143.1 Protein Homology CDS 38882 39709 . - 0 ID=cds-WP_000174982.1;Parent=gene-C9E95_RS16650;Dbxref=GenBank:WP_000174982.1;Name=WP_000174982.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460276.1;locus_tag=C9E95_RS16650;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_000174982.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 39928 40269 . + . ID=gene-C9E95_RS16655;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=C9E95_RS16655;old_locus_tag=C9E95_17065 NZ_PYJW01000143.1 Protein Homology CDS 39928 40269 . + 0 ID=cds-WP_001039301.1;Parent=gene-C9E95_RS16655;Dbxref=GenBank:WP_001039301.1;Name=WP_001039301.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460277.1;locus_tag=C9E95_RS16655;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_001039301.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 40570 40890 . + . ID=gene-C9E95_RS16665;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=C9E95_RS16665;old_locus_tag=C9E95_17075 NZ_PYJW01000143.1 Protein Homology CDS 40570 40890 . + 0 ID=cds-WP_000412161.1;Parent=gene-C9E95_RS16665;Dbxref=GenBank:WP_000412161.1;Name=WP_000412161.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460278.1;locus_tag=C9E95_RS16665;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_000412161.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 40973 42331 . + . ID=gene-C9E95_RS16670;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=C9E95_RS16670;old_locus_tag=C9E95_17080 NZ_PYJW01000143.1 Protein Homology CDS 40973 42331 . + 0 ID=cds-WP_000073063.1;Parent=gene-C9E95_RS16670;Dbxref=GenBank:WP_000073063.1;Name=WP_000073063.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=C9E95_RS16670;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_000073063.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 42382 42729 . + . ID=gene-C9E95_RS16675;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=C9E95_RS16675;old_locus_tag=C9E95_17085 NZ_PYJW01000143.1 Protein Homology CDS 42382 42729 . + 0 ID=cds-WP_001580338.1;Parent=gene-C9E95_RS16675;Dbxref=GenBank:WP_001580338.1;Name=WP_001580338.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460280.1;locus_tag=C9E95_RS16675;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_001580338.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 42740 43582 . + . ID=gene-C9E95_RS16680;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=C9E95_RS16680;old_locus_tag=C9E95_17090 NZ_PYJW01000143.1 Protein Homology CDS 42740 43582 . + 0 ID=cds-WP_000983393.1;Parent=gene-C9E95_RS16680;Dbxref=GenBank:WP_000983393.1;Name=WP_000983393.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460281.1;locus_tag=C9E95_RS16680;product=transcriptional regulator ChbR;protein_id=WP_000983393.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 43707 45062 . + . ID=gene-C9E95_RS16685;Name=C9E95_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16685;old_locus_tag=C9E95_17095 NZ_PYJW01000143.1 Protein Homology CDS 43707 45062 . + 0 ID=cds-WP_000078780.1;Parent=gene-C9E95_RS16685;Dbxref=GenBank:WP_000078780.1;Name=WP_000078780.1;Ontology_term=GO:0005975,GO:0008706,GO:0046872;gbkey=CDS;go_function=6-phospho-beta-glucosidase activity|0008706||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460282.1;locus_tag=C9E95_RS16685;product=6-phospho-beta-glucosidase;protein_id=WP_000078780.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 45075 45833 . + . ID=gene-C9E95_RS16690;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=C9E95_RS16690;old_locus_tag=C9E95_17100 NZ_PYJW01000143.1 Protein Homology CDS 45075 45833 . + 0 ID=cds-WP_000442730.1;Parent=gene-C9E95_RS16690;Dbxref=GenBank:WP_000442730.1;Name=WP_000442730.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460283.1;locus_tag=C9E95_RS16690;product=chitin disaccharide deacetylase;protein_id=WP_000442730.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 45877 48129 . - . ID=gene-C9E95_RS16695;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=C9E95_RS16695;old_locus_tag=C9E95_17105 NZ_PYJW01000143.1 Protein Homology CDS 45877 48129 . - 0 ID=cds-WP_000019105.1;Parent=gene-C9E95_RS16695;Dbxref=GenBank:WP_000019105.1;Name=WP_000019105.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=C9E95_RS16695;product=catalase HPII;protein_id=WP_000019105.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 48346 48588 . + . ID=gene-C9E95_RS16700;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=C9E95_RS16700;old_locus_tag=C9E95_17110 NZ_PYJW01000143.1 Protein Homology CDS 48346 48588 . + 0 ID=cds-WP_000977510.1;Parent=gene-C9E95_RS16700;Dbxref=GenBank:WP_000977510.1;Name=WP_000977510.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460285.1;locus_tag=C9E95_RS16700;product=cell division activator CedA;protein_id=WP_000977510.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 48691 50082 . - . ID=gene-C9E95_RS16705;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=C9E95_RS16705;old_locus_tag=C9E95_17115 NZ_PYJW01000143.1 Protein Homology CDS 48691 50082 . - 0 ID=cds-WP_001010662.1;Parent=gene-C9E95_RS16705;Dbxref=GenBank:WP_001010662.1;Name=WP_001010662.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=C9E95_RS16705;product=cystine/sulfocysteine:cation symporter;protein_id=WP_001010662.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 50219 50818 . - . ID=gene-C9E95_RS16710;Name=C9E95_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16710;old_locus_tag=C9E95_17120 NZ_PYJW01000143.1 Protein Homology CDS 50219 50818 . - 0 ID=cds-WP_000505804.1;Parent=gene-C9E95_RS16710;Dbxref=GenBank:WP_000505804.1;Name=WP_000505804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460287.3;locus_tag=C9E95_RS16710;product=metal-dependent hydrolase;protein_id=WP_000505804.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 50956 51624 . - . ID=gene-C9E95_RS16715;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=C9E95_RS16715;old_locus_tag=C9E95_17125 NZ_PYJW01000143.1 Protein Homology CDS 50956 51624 . - 0 ID=cds-WP_000106854.1;Parent=gene-C9E95_RS16715;Dbxref=GenBank:WP_000106854.1;Name=WP_000106854.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460288.1;locus_tag=C9E95_RS16715;product=hexitol phosphatase HxpB;protein_id=WP_000106854.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 51773 52309 . + . ID=gene-C9E95_RS16720;Name=C9E95_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16720;old_locus_tag=C9E95_17130 NZ_PYJW01000143.1 Protein Homology CDS 51773 52309 . + 0 ID=cds-WP_000222158.1;Parent=gene-C9E95_RS16720;Dbxref=GenBank:WP_000222158.1;Name=WP_000222158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460289.1;locus_tag=C9E95_RS16720;product=YniB family protein;protein_id=WP_000222158.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 52352 53212 . - . ID=gene-C9E95_RS16725;Name=C9E95_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16725;old_locus_tag=C9E95_17135 NZ_PYJW01000143.1 Protein Homology CDS 52352 53212 . - 0 ID=cds-WP_000267686.1;Parent=gene-C9E95_RS16725;Dbxref=GenBank:WP_000267686.1;Name=WP_000267686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460290.1;locus_tag=C9E95_RS16725;product=fructosamine kinase family protein;protein_id=WP_000267686.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 53319 53609 . - . ID=gene-C9E95_RS16730;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=C9E95_RS16730;old_locus_tag=C9E95_17140 NZ_PYJW01000143.1 Protein Homology CDS 53319 53609 . - 0 ID=cds-WP_000146133.1;Parent=gene-C9E95_RS16730;Dbxref=GenBank:WP_000146133.1;Name=WP_000146133.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460291.1;locus_tag=C9E95_RS16730;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000146133.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 53706 54638 . - . ID=gene-C9E95_RS16735;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=C9E95_RS16735;old_locus_tag=C9E95_17145 NZ_PYJW01000143.1 Protein Homology CDS 53706 54638 . - 0 ID=cds-WP_000251707.1;Parent=gene-C9E95_RS16735;Dbxref=GenBank:WP_000251707.1;Name=WP_000251707.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460292.1;locus_tag=C9E95_RS16735;product=6-phosphofructokinase II;protein_id=WP_000251707.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 54927 55685 . + . ID=gene-C9E95_RS16740;Name=C9E95_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16740;old_locus_tag=C9E95_17150 NZ_PYJW01000143.1 Protein Homology CDS 54927 55685 . + 0 ID=cds-WP_000770981.1;Parent=gene-C9E95_RS16740;Dbxref=GenBank:WP_000770981.1;Name=WP_000770981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460293.1;locus_tag=C9E95_RS16740;product=DUF481 domain-containing protein;protein_id=WP_000770981.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 55734 56693 . - . ID=gene-C9E95_RS16745;Name=C9E95_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16745;old_locus_tag=C9E95_17155 NZ_PYJW01000143.1 Protein Homology CDS 55734 56693 . - 0 ID=cds-WP_001046438.1;Parent=gene-C9E95_RS16745;Dbxref=GenBank:WP_001046438.1;Name=WP_001046438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460294.1;locus_tag=C9E95_RS16745;product=lipid A deacylase LpxR family protein;protein_id=WP_001046438.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 56836 57150 . + . ID=gene-C9E95_RS16750;Name=C9E95_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16750;old_locus_tag=C9E95_17160 NZ_PYJW01000143.1 Protein Homology CDS 56836 57150 . + 0 ID=cds-WP_000916617.1;Parent=gene-C9E95_RS16750;Dbxref=GenBank:WP_000916617.1;Name=WP_000916617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460295.1;locus_tag=C9E95_RS16750;product=hypothetical protein;protein_id=WP_000916617.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 57147 58001 . + . ID=gene-C9E95_RS16755;Name=C9E95_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16755;old_locus_tag=C9E95_17165 NZ_PYJW01000143.1 Protein Homology CDS 57147 58001 . + 0 ID=cds-WP_001044093.1;Parent=gene-C9E95_RS16755;Dbxref=GenBank:WP_001044093.1;Name=WP_001044093.1;Ontology_term=GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=C9E95_RS16755;product=DNA/RNA non-specific endonuclease;protein_id=WP_001044093.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 58261 60189 . + . ID=gene-C9E95_RS16760;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=C9E95_RS16760;old_locus_tag=C9E95_17170 NZ_PYJW01000143.1 Protein Homology CDS 58261 60189 . + 0 ID=cds-WP_001144226.1;Parent=gene-C9E95_RS16760;Dbxref=GenBank:WP_001144226.1;Name=WP_001144226.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=C9E95_RS16760;product=threonine--tRNA ligase;protein_id=WP_001144226.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 60193 60735 . + . ID=gene-C9E95_RS16765;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=C9E95_RS16765;old_locus_tag=C9E95_17175 NZ_PYJW01000143.1 Protein Homology CDS 60193 60735 . + 0 ID=cds-WP_001574431.1;Parent=gene-C9E95_RS16765;Dbxref=GenBank:WP_001574431.1;Name=WP_001574431.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=C9E95_RS16765;product=translation initiation factor IF-3;protein_id=WP_001574431.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 60831 61028 . + . ID=gene-C9E95_RS16770;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=C9E95_RS16770;old_locus_tag=C9E95_17180 NZ_PYJW01000143.1 Protein Homology CDS 60831 61028 . + 0 ID=cds-WP_001124225.1;Parent=gene-C9E95_RS16770;Dbxref=GenBank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=C9E95_RS16770;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 61079 61435 . + . ID=gene-C9E95_RS16775;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=C9E95_RS16775;old_locus_tag=C9E95_17185 NZ_PYJW01000143.1 Protein Homology CDS 61079 61435 . + 0 ID=cds-WP_000124850.1;Parent=gene-C9E95_RS16775;Dbxref=GenBank:WP_000124850.1;Name=WP_000124850.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=C9E95_RS16775;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11 NZ_PYJW01000143.1 cmsearch sequence_feature 61551 61674 . + . ID=id-NZ_PYJW01000143.1:61551..61674;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_PYJW01000143.1 RefSeq gene 61556 61600 . + . ID=gene-C9E95_RS16780;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=C9E95_RS16780;old_locus_tag=C9E95_17190 NZ_PYJW01000143.1 Protein Homology CDS 61556 61600 . + 0 ID=cds-WP_001386830.1;Parent=gene-C9E95_RS16780;Dbxref=GenBank:WP_001386830.1;Name=WP_001386830.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=C9E95_RS16780;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 61737 62720 . + . ID=gene-C9E95_RS16785;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=C9E95_RS16785;old_locus_tag=C9E95_17195 NZ_PYJW01000143.1 Protein Homology CDS 61737 62720 . + 0 ID=cds-WP_000018570.1;Parent=gene-C9E95_RS16785;Dbxref=GenBank:WP_000018570.1;Name=WP_000018570.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=C9E95_RS16785;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_000018570.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 62736 65123 . + . ID=gene-C9E95_RS16790;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=C9E95_RS16790;old_locus_tag=C9E95_17200 NZ_PYJW01000143.1 Protein Homology CDS 62736 65123 . + 0 ID=cds-WP_000672408.1;Parent=gene-C9E95_RS16790;Dbxref=GenBank:WP_000672408.1;Name=WP_000672408.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=C9E95_RS16790;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_000672408.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 65128 65427 . + . ID=gene-C9E95_RS16795;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=C9E95_RS16795;old_locus_tag=C9E95_17205 NZ_PYJW01000143.1 Protein Homology CDS 65128 65427 . + 0 ID=cds-WP_001229266.1;Parent=gene-C9E95_RS16795;Dbxref=GenBank:WP_001229266.1;Name=WP_001229266.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=C9E95_RS16795;product=integration host factor subunit alpha;protein_id=WP_001229266.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 65630 66610 . + . ID=gene-C9E95_RS16800;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=C9E95_RS16800;old_locus_tag=C9E95_17210 NZ_PYJW01000143.1 Protein Homology CDS 65630 66610 . + 0 ID=cds-WP_000954982.1;Parent=gene-C9E95_RS16800;Dbxref=GenBank:WP_000954982.1;Name=WP_000954982.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460306.1;locus_tag=C9E95_RS16800;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_000954982.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 66702 67253 . + . ID=gene-C9E95_RS16805;Name=C9E95_RS16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16805;old_locus_tag=C9E95_17215 NZ_PYJW01000143.1 Protein Homology CDS 66702 67253 . + 0 ID=cds-WP_001181565.1;Parent=gene-C9E95_RS16805;Dbxref=GenBank:WP_001181565.1;Name=WP_001181565.1;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460307.1;locus_tag=C9E95_RS16805;product=glutathione peroxidase;protein_id=WP_001181565.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 67253 68002 . + . ID=gene-C9E95_RS16810;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=C9E95_RS16810;old_locus_tag=C9E95_17220 NZ_PYJW01000143.1 Protein Homology CDS 67253 68002 . + 0 ID=cds-WP_023220522.1;Parent=gene-C9E95_RS16810;Dbxref=GenBank:WP_023220522.1;Name=WP_023220522.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460308.1;locus_tag=C9E95_RS16810;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_023220522.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 68079 68543 . + . ID=gene-C9E95_RS16815;Name=C9E95_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16815;old_locus_tag=C9E95_17225 NZ_PYJW01000143.1 Protein Homology CDS 68079 68543 . + 0 ID=cds-WP_001213256.1;Parent=gene-C9E95_RS16815;Dbxref=GenBank:WP_001213256.1;Name=WP_001213256.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460309.1;locus_tag=C9E95_RS16815;product=C40 family peptidase;protein_id=WP_001213256.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 68857 69570 . + . ID=gene-C9E95_RS16820;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=C9E95_RS16820;old_locus_tag=C9E95_17230 NZ_PYJW01000143.1 Protein Homology CDS 68857 69570 . + 0 ID=cds-WP_080203839.1;Parent=gene-C9E95_RS16820;Dbxref=GenBank:WP_080203839.1;Name=WP_080203839.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460310.1;locus_tag=C9E95_RS16820;product=anti-FlhDC factor YdiV;protein_id=WP_080203839.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 69632 71074 . + . ID=gene-C9E95_RS16825;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=C9E95_RS16825;old_locus_tag=C9E95_17235 NZ_PYJW01000143.1 Protein Homology CDS 69632 71074 . + 0 ID=cds-WP_000175682.1;Parent=gene-C9E95_RS16825;Dbxref=GenBank:WP_000175682.1;Name=WP_000175682.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460311.1;locus_tag=C9E95_RS16825;product=protein adenylyltransferase SelO;protein_id=WP_000175682.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 71109 71300 . - . ID=gene-C9E95_RS16830;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=C9E95_RS16830;old_locus_tag=C9E95_17240 NZ_PYJW01000143.1 Protein Homology CDS 71109 71300 . - 0 ID=cds-WP_000089115.1;Parent=gene-C9E95_RS16830;Dbxref=GenBank:WP_000089115.1;Name=WP_000089115.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460312.1;locus_tag=C9E95_RS16830;product=hemin uptake protein HemP;protein_id=WP_000089115.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 71457 72503 . - . ID=gene-C9E95_RS16835;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=C9E95_RS16835;old_locus_tag=C9E95_17245 NZ_PYJW01000143.1 Protein Homology CDS 71457 72503 . - 0 ID=cds-WP_001082194.1;Parent=gene-C9E95_RS16835;Dbxref=GenBank:WP_001082194.1;Name=WP_001082194.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460313.1;locus_tag=C9E95_RS16835;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_001082194.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 72659 73492 . - . ID=gene-C9E95_RS16840;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=C9E95_RS16840;old_locus_tag=C9E95_17250 NZ_PYJW01000143.1 Protein Homology CDS 72659 73492 . - 0 ID=cds-WP_000370992.1;Parent=gene-C9E95_RS16840;Dbxref=GenBank:WP_000370992.1;Name=WP_000370992.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460314.1;locus_tag=C9E95_RS16840;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_000370992.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 73829 76207 . + . ID=gene-C9E95_RS16845;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=C9E95_RS16845;old_locus_tag=C9E95_17255 NZ_PYJW01000143.1 Protein Homology CDS 73829 76207 . + 0 ID=cds-WP_000069333.1;Parent=gene-C9E95_RS16845;Dbxref=GenBank:WP_000069333.1;Name=WP_000069333.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460315.1;locus_tag=C9E95_RS16845;product=phosphoenolpyruvate synthase;protein_id=WP_000069333.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 76249 77889 . - . ID=gene-C9E95_RS16850;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=C9E95_RS16850;old_locus_tag=C9E95_17260 NZ_PYJW01000143.1 Protein Homology CDS 76249 77889 . - 0 ID=cds-WP_000117492.1;Parent=gene-C9E95_RS16850;Dbxref=GenBank:WP_000117492.1;Name=WP_000117492.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460316.1;locus_tag=C9E95_RS16850;product=medium-chain fatty-acid--CoA ligase;protein_id=WP_000117492.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 78127 78420 . - . ID=gene-C9E95_RS16855;Name=C9E95_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16855;old_locus_tag=C9E95_17265 NZ_PYJW01000143.1 Protein Homology CDS 78127 78420 . - 0 ID=cds-WP_000093364.1;Parent=gene-C9E95_RS16855;Dbxref=GenBank:WP_000093364.1;Name=WP_000093364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460317.1;locus_tag=C9E95_RS16855;product=ferredoxin family protein;protein_id=WP_000093364.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 78417 79703 . - . ID=gene-C9E95_RS16860;Name=C9E95_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16860;old_locus_tag=C9E95_17270 NZ_PYJW01000143.1 Protein Homology CDS 78417 79703 . - 0 ID=cds-WP_001278555.1;Parent=gene-C9E95_RS16860;Dbxref=GenBank:WP_001278555.1;Name=WP_001278555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460318.1;locus_tag=C9E95_RS16860;product=FAD-dependent oxidoreductase;protein_id=WP_001278555.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 79760 80695 . - . ID=gene-C9E95_RS16865;Name=C9E95_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16865;old_locus_tag=C9E95_17275 NZ_PYJW01000143.1 Protein Homology CDS 79760 80695 . - 0 ID=cds-WP_001015885.1;Parent=gene-C9E95_RS16865;Dbxref=GenBank:WP_001015885.1;Name=WP_001015885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460319.1;locus_tag=C9E95_RS16865;product=electron transfer flavoprotein subunit alpha;protein_id=WP_001015885.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 80717 81481 . - . ID=gene-C9E95_RS16870;Name=C9E95_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16870;old_locus_tag=C9E95_17280 NZ_PYJW01000143.1 Protein Homology CDS 80717 81481 . - 0 ID=cds-WP_000692095.1;Parent=gene-C9E95_RS16870;Dbxref=GenBank:WP_000692095.1;Name=WP_000692095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460320.1;locus_tag=C9E95_RS16870;product=electron transfer flavoprotein;protein_id=WP_000692095.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 81944 82834 . + . ID=gene-C9E95_RS16875;Name=C9E95_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16875;old_locus_tag=C9E95_17285 NZ_PYJW01000143.1 Protein Homology CDS 81944 82834 . + 0 ID=cds-WP_000284832.1;Parent=gene-C9E95_RS16875;Dbxref=GenBank:WP_000284832.1;Name=WP_000284832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460321.1;locus_tag=C9E95_RS16875;product=AraC family transcriptional regulator;protein_id=WP_000284832.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 82910 84061 . - . ID=gene-C9E95_RS16880;Name=C9E95_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16880;old_locus_tag=C9E95_17290 NZ_PYJW01000143.1 Protein Homology CDS 82910 84061 . - 0 ID=cds-WP_080203840.1;Parent=gene-C9E95_RS16880;Dbxref=GenBank:WP_080203840.1;Name=WP_080203840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460322.1;locus_tag=C9E95_RS16880;product=acyl-CoA dehydrogenase;protein_id=WP_080203840.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 84075 85670 . - . ID=gene-C9E95_RS16885;Name=C9E95_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16885;old_locus_tag=C9E95_17295 NZ_PYJW01000143.1 Protein Homology CDS 84075 85670 . - 0 ID=cds-WP_000700599.1;Parent=gene-C9E95_RS16885;Dbxref=GenBank:WP_000700599.1;Name=WP_000700599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=C9E95_RS16885;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_000700599.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 85824 86582 . - . ID=gene-C9E95_RS16890;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=C9E95_RS16890;old_locus_tag=C9E95_17300 NZ_PYJW01000143.1 Protein Homology CDS 85824 86582 . - 0 ID=cds-WP_000860221.1;Parent=gene-C9E95_RS16890;Dbxref=GenBank:WP_000860221.1;Name=WP_000860221.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460324.1;locus_tag=C9E95_RS16890;product=type I 3-dehydroquinate dehydratase;protein_id=WP_000860221.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 86627 87493 . - . ID=gene-C9E95_RS16895;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=C9E95_RS16895;old_locus_tag=C9E95_17305 NZ_PYJW01000143.1 Protein Homology CDS 86627 87493 . - 0 ID=cds-WP_000383488.1;Parent=gene-C9E95_RS16895;Dbxref=GenBank:WP_000383488.1;Name=WP_000383488.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460325.1;locus_tag=C9E95_RS16895;product=quinate/shikimate dehydrogenase;protein_id=WP_000383488.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 87560 88795 . - . ID=gene-C9E95_RS16900;Name=C9E95_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16900;old_locus_tag=C9E95_17310 NZ_PYJW01000143.1 Protein Homology CDS 87560 88795 . - 0 ID=cds-WP_000081207.1;Parent=gene-C9E95_RS16900;Dbxref=GenBank:WP_000081207.1;Name=WP_000081207.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460326.1;locus_tag=C9E95_RS16900;product=MFS transporter;protein_id=WP_000081207.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 89159 90370 . - . ID=gene-C9E95_RS16905;Name=C9E95_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16905;old_locus_tag=C9E95_17315 NZ_PYJW01000143.1 Protein Homology CDS 89159 90370 . - 0 ID=cds-WP_000797669.1;Parent=gene-C9E95_RS16905;Dbxref=GenBank:WP_000797669.1;Name=WP_000797669.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460327.1;locus_tag=C9E95_RS16905;product=MFS transporter;protein_id=WP_000797669.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 90511 90870 . - . ID=gene-C9E95_RS16910;Name=C9E95_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16910;old_locus_tag=C9E95_17320 NZ_PYJW01000143.1 Protein Homology CDS 90511 90870 . - 0 ID=cds-WP_000980454.1;Parent=gene-C9E95_RS16910;Dbxref=GenBank:WP_000980454.1;Name=WP_000980454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460328.1;locus_tag=C9E95_RS16910;product=YdiL family protein;protein_id=WP_000980454.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 91038 91145 . - . ID=gene-C9E95_RS16915;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=C9E95_RS16915;old_locus_tag=C9E95_17325 NZ_PYJW01000143.1 cmsearch antisense_RNA 91038 91145 . - . ID=rna-C9E95_RS16915;Parent=gene-C9E95_RS16915;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS16915;product=antisense sRNA RprA NZ_PYJW01000143.1 cmsearch exon 91038 91145 . - . ID=exon-C9E95_RS16915-1;Parent=rna-C9E95_RS16915;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS16915;product=antisense sRNA RprA NZ_PYJW01000143.1 RefSeq gene 91328 92446 . - . ID=gene-C9E95_RS16920;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=C9E95_RS16920;old_locus_tag=C9E95_17330 NZ_PYJW01000143.1 Protein Homology CDS 91328 92446 . - 0 ID=cds-WP_000248615.1;Parent=gene-C9E95_RS16920;Dbxref=GenBank:WP_000248615.1;Name=WP_000248615.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460329.1;locus_tag=C9E95_RS16920;product=AI-2E family transporter YdiK;protein_id=WP_000248615.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 92711 95767 . + . ID=gene-C9E95_RS16925;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=C9E95_RS16925;old_locus_tag=C9E95_17335 NZ_PYJW01000143.1 Protein Homology CDS 92711 95767 . + 0 ID=cds-WP_000612907.1;Parent=gene-C9E95_RS16925;Dbxref=GenBank:WP_000612907.1;Name=WP_000612907.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460330.1;locus_tag=C9E95_RS16925;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_000612907.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 95764 96174 . + . ID=gene-C9E95_RS16930;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=C9E95_RS16930;old_locus_tag=C9E95_17340 NZ_PYJW01000143.1 Protein Homology CDS 95764 96174 . + 0 ID=cds-WP_000637927.1;Parent=gene-C9E95_RS16930;Dbxref=GenBank:WP_000637927.1;Name=WP_000637927.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460331.1;locus_tag=C9E95_RS16930;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637927.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 96273 96461 . + . ID=gene-C9E95_RS16935;Name=C9E95_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16935;old_locus_tag=C9E95_17345 NZ_PYJW01000143.1 Protein Homology CDS 96273 96461 . + 0 ID=cds-WP_001537749.1;Parent=gene-C9E95_RS16935;Dbxref=GenBank:WP_001537749.1;Name=WP_001537749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=C9E95_RS16935;product=YdiH family protein;protein_id=WP_001537749.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 96749 98095 . - . ID=gene-C9E95_RS16940;Name=C9E95_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16940;old_locus_tag=C9E95_17350 NZ_PYJW01000143.1 Protein Homology CDS 96749 98095 . - 0 ID=cds-WP_023993757.1;Parent=gene-C9E95_RS16940;Dbxref=GenBank:WP_023993757.1;Name=WP_023993757.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460333.1;locus_tag=C9E95_RS16940;product=L-cystine transporter;protein_id=WP_023993757.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 98522 98890 . + . ID=gene-C9E95_RS16945;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=C9E95_RS16945;old_locus_tag=C9E95_17355 NZ_PYJW01000143.1 Protein Homology CDS 98522 98890 . + 0 ID=cds-WP_000418969.1;Parent=gene-C9E95_RS16945;Dbxref=GenBank:WP_000418969.1;Name=WP_000418969.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460334.1;locus_tag=C9E95_RS16945;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_000418969.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 98899 100386 . + . ID=gene-C9E95_RS16950;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=C9E95_RS16950;old_locus_tag=C9E95_17360 NZ_PYJW01000143.1 Protein Homology CDS 98899 100386 . + 0 ID=cds-WP_000089383.1;Parent=gene-C9E95_RS16950;Dbxref=GenBank:WP_000089383.1;Name=WP_000089383.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=C9E95_RS16950;product=Fe-S cluster assembly protein SufB;protein_id=WP_000089383.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 100403 101149 . + . ID=gene-C9E95_RS16955;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=C9E95_RS16955;old_locus_tag=C9E95_17365 NZ_PYJW01000143.1 Protein Homology CDS 100403 101149 . + 0 ID=cds-WP_000948902.1;Parent=gene-C9E95_RS16955;Dbxref=GenBank:WP_000948902.1;Name=WP_000948902.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=C9E95_RS16955;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_000948902.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 101124 102395 . + . ID=gene-C9E95_RS16960;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=C9E95_RS16960;old_locus_tag=C9E95_17370 NZ_PYJW01000143.1 Protein Homology CDS 101124 102395 . + 0 ID=cds-WP_058113680.1;Parent=gene-C9E95_RS16960;Dbxref=GenBank:WP_058113680.1;Name=WP_058113680.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460337.1;locus_tag=C9E95_RS16960;product=Fe-S cluster assembly protein SufD;protein_id=WP_058113680.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 102392 103612 . + . ID=gene-C9E95_RS16965;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=C9E95_RS16965;old_locus_tag=C9E95_17375 NZ_PYJW01000143.1 Protein Homology CDS 102392 103612 . + 0 ID=cds-WP_080203841.1;Parent=gene-C9E95_RS16965;Dbxref=GenBank:WP_080203841.1;Name=WP_080203841.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460338.1;locus_tag=C9E95_RS16965;product=cysteine desulfurase SufS;protein_id=WP_080203841.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 103625 104041 . + . ID=gene-C9E95_RS16970;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=C9E95_RS16970;old_locus_tag=C9E95_17380 NZ_PYJW01000143.1 Protein Homology CDS 103625 104041 . + 0 ID=cds-WP_000729470.1;Parent=gene-C9E95_RS16970;Dbxref=GenBank:WP_000729470.1;Name=WP_000729470.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460339.1;locus_tag=C9E95_RS16970;product=cysteine desulfuration protein SufE;protein_id=WP_000729470.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 104196 105197 . + . ID=gene-C9E95_RS16975;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;locus_tag=C9E95_RS16975;old_locus_tag=C9E95_17385 NZ_PYJW01000143.1 Protein Homology CDS 104196 105197 . + 0 ID=cds-WP_080203842.1;Parent=gene-C9E95_RS16975;Dbxref=GenBank:WP_080203842.1;Name=WP_080203842.1;Ontology_term=GO:0009252,GO:0018104,GO:0016757,GO:0071972;gbkey=CDS;gene=ldtE;go_function=glycosyltransferase activity|0016757||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460340.1;locus_tag=C9E95_RS16975;product=L%2CD-transpeptidase LdtE;protein_id=WP_080203842.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 105264 105500 . - . ID=gene-C9E95_RS16980;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=C9E95_RS16980;old_locus_tag=C9E95_17390 NZ_PYJW01000143.1 Protein Homology CDS 105264 105500 . - 0 ID=cds-WP_001082307.1;Parent=gene-C9E95_RS16980;Dbxref=GenBank:WP_001082307.1;Name=WP_001082307.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460342.1;locus_tag=C9E95_RS16980;product=murein lipoprotein Lpp;protein_id=WP_001082307.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 105811 107223 . - . ID=gene-C9E95_RS16985;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=C9E95_RS16985;old_locus_tag=C9E95_17395 NZ_PYJW01000143.1 Protein Homology CDS 105811 107223 . - 0 ID=cds-WP_000751444.1;Parent=gene-C9E95_RS16985;Dbxref=GenBank:WP_000751444.1;Name=WP_000751444.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=C9E95_RS16985;product=pyruvate kinase PykF;protein_id=WP_000751444.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 107231 107461 . - . ID=gene-C9E95_RS23810;Name=C9E95_RS23810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23810 NZ_PYJW01000143.1 Protein Homology CDS 107231 107461 . - 0 ID=cds-WP_418143684.1;Parent=gene-C9E95_RS23810;Dbxref=GenBank:WP_418143684.1;Name=WP_418143684.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049534.1;locus_tag=C9E95_RS23810;product=hypothetical protein;protein_id=WP_418143684.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 107625 108968 . - . ID=gene-C9E95_RS16990;Name=C9E95_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16990;old_locus_tag=C9E95_17405 NZ_PYJW01000143.1 Protein Homology CDS 107625 108968 . - 0 ID=cds-WP_000756089.1;Parent=gene-C9E95_RS16990;Dbxref=GenBank:WP_000756089.1;Name=WP_000756089.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460344.1;locus_tag=C9E95_RS16990;product=APC family permease;protein_id=WP_000756089.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 108990 109883 . - . ID=gene-C9E95_RS16995;Name=C9E95_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16995;old_locus_tag=C9E95_17410 NZ_PYJW01000143.1 Protein Homology CDS 108990 109883 . - 0 ID=cds-WP_001000503.1;Parent=gene-C9E95_RS16995;Dbxref=GenBank:WP_001000503.1;Name=WP_001000503.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460345.1;locus_tag=C9E95_RS16995;product=proline iminopeptidase-family hydrolase;protein_id=WP_001000503.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 109942 110679 . - . ID=gene-C9E95_RS17000;Name=C9E95_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17000;old_locus_tag=C9E95_17415 NZ_PYJW01000143.1 Protein Homology CDS 109942 110679 . - 0 ID=cds-WP_080203843.1;Parent=gene-C9E95_RS17000;Dbxref=GenBank:WP_080203843.1;Name=WP_080203843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460346.1;locus_tag=C9E95_RS17000;product=glutamine amidotransferase;protein_id=WP_080203843.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 110691 111917 . - . ID=gene-C9E95_RS17005;Name=C9E95_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17005;old_locus_tag=C9E95_17420 NZ_PYJW01000143.1 Protein Homology CDS 110691 111917 . - 0 ID=cds-WP_000471809.1;Parent=gene-C9E95_RS17005;Dbxref=GenBank:WP_000471809.1;Name=WP_000471809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460347.1;locus_tag=C9E95_RS17005;product=PfkB family carbohydrate kinase;protein_id=WP_000471809.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 112240 115302 . - . ID=gene-C9E95_RS17010;Name=ttrA;gbkey=Gene;gene=ttrA;gene_biotype=protein_coding;locus_tag=C9E95_RS17010;old_locus_tag=C9E95_17425 NZ_PYJW01000143.1 Protein Homology CDS 112240 115302 . - 0 ID=cds-WP_080203844.1;Parent=gene-C9E95_RS17010;Dbxref=GenBank:WP_080203844.1;Name=WP_080203844.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;gene=ttrA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460348.1;locus_tag=C9E95_RS17010;product=tetrathionate reductase subunit TtrA;protein_id=WP_080203844.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 115295 116317 . - . ID=gene-C9E95_RS17015;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=protein_coding;locus_tag=C9E95_RS17015;old_locus_tag=C9E95_17430 NZ_PYJW01000143.1 Protein Homology CDS 115295 116317 . - 0 ID=cds-WP_063809082.1;Parent=gene-C9E95_RS17015;Dbxref=GenBank:WP_063809082.1;Name=WP_063809082.1;gbkey=CDS;gene=ttrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460349.1;locus_tag=C9E95_RS17015;product=tetrathionate reductase subunit TtrC;protein_id=WP_063809082.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 116318 117052 . - . ID=gene-C9E95_RS17020;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=protein_coding;locus_tag=C9E95_RS17020;old_locus_tag=C9E95_17435 NZ_PYJW01000143.1 Protein Homology CDS 116318 117052 . - 0 ID=cds-WP_001527654.1;Parent=gene-C9E95_RS17020;Dbxref=GenBank:WP_001527654.1;Name=WP_001527654.1;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518945.1;locus_tag=C9E95_RS17020;product=tetrathionate reductase subunit TtrB;protein_id=WP_001527654.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 117234 119012 . + . ID=gene-C9E95_RS17025;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=C9E95_RS17025;old_locus_tag=C9E95_17440 NZ_PYJW01000143.1 Protein Homology CDS 117234 119012 . + 0 ID=cds-WP_001214414.1;Parent=gene-C9E95_RS17025;Dbxref=GenBank:WP_001214414.1;Name=WP_001214414.1;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=C9E95_RS17025;product=tetrathionate respiration histidine kinase TtrS;protein_id=WP_001214414.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 118987 119607 . + . ID=gene-C9E95_RS17030;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=C9E95_RS17030;old_locus_tag=C9E95_17445 NZ_PYJW01000143.1 Protein Homology CDS 118987 119607 . + 0 ID=cds-WP_000190927.1;Parent=gene-C9E95_RS17030;Dbxref=GenBank:WP_000190927.1;Name=WP_000190927.1;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460352.3;locus_tag=C9E95_RS17030;product=tetrathionate respiration response regulator TtrR;protein_id=WP_000190927.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 119705 119917 . + . ID=gene-C9E95_RS17035;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=C9E95_RS17035;old_locus_tag=C9E95_17450 NZ_PYJW01000143.1 Protein Homology CDS 119705 119917 . + 0 ID=cds-WP_000165779.1;Parent=gene-C9E95_RS17035;Dbxref=GenBank:WP_000165779.1;Name=WP_000165779.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460353.1;locus_tag=C9E95_RS17035;product=fumarate hydratase FumD;protein_id=WP_000165779.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 120013 120972 . - . ID=gene-C9E95_RS17040;Name=mlrB;gbkey=Gene;gene=mlrB;gene_biotype=protein_coding;locus_tag=C9E95_RS17040;old_locus_tag=C9E95_17455 NZ_PYJW01000143.1 Protein Homology CDS 120013 120972 . - 0 ID=cds-WP_001060729.1;Parent=gene-C9E95_RS17040;Dbxref=GenBank:WP_001060729.1;Name=WP_001060729.1;gbkey=CDS;gene=mlrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460354.1;locus_tag=C9E95_RS17040;product=transcriptional regulator MlrB;protein_id=WP_001060729.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 121145 121873 . - . ID=gene-C9E95_RS17045;Name=C9E95_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17045;old_locus_tag=C9E95_17460 NZ_PYJW01000143.1 Protein Homology CDS 121145 121873 . - 0 ID=cds-WP_000122321.1;Parent=gene-C9E95_RS17045;Dbxref=GenBank:WP_000122321.1;Name=WP_000122321.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460355.1;locus_tag=C9E95_RS17045;product=MerR family transcriptional regulator;protein_id=WP_000122321.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 122052 122690 . - . ID=gene-C9E95_RS17050;Name=C9E95_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17050;old_locus_tag=C9E95_17465 NZ_PYJW01000143.1 Protein Homology CDS 122052 122690 . - 0 ID=cds-WP_000666335.1;Parent=gene-C9E95_RS17050;Dbxref=GenBank:WP_000666335.1;Name=WP_000666335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460356.1;locus_tag=C9E95_RS17050;product=two component system response regulator;protein_id=WP_000666335.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 122721 125483 . - . ID=gene-C9E95_RS17055;Name=C9E95_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17055;old_locus_tag=C9E95_17470 NZ_PYJW01000143.1 Protein Homology CDS 122721 125483 . - 0 ID=cds-WP_080203845.1;Parent=gene-C9E95_RS17055;Dbxref=GenBank:WP_080203845.1;Name=WP_080203845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460357.1;locus_tag=C9E95_RS17055;product=two component system sensor kinase;protein_id=WP_080203845.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 125884 126285 . + . ID=gene-C9E95_RS17060;Name=spiC;gbkey=Gene;gene=spiC;gene_biotype=protein_coding;locus_tag=C9E95_RS17060;old_locus_tag=C9E95_17475 NZ_PYJW01000143.1 Protein Homology CDS 125884 126285 . + 0 ID=cds-WP_001738217.1;Parent=gene-C9E95_RS17060;Dbxref=GenBank:WP_001738217.1;Name=WP_001738217.1;gbkey=CDS;gene=spiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460358.1;locus_tag=C9E95_RS17060;product=SPI-2 type III secretion system protein SpiC;protein_id=WP_001738217.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 126287 127780 . + . ID=gene-C9E95_RS17065;Name=spiA;gbkey=Gene;gene=spiA;gene_biotype=protein_coding;locus_tag=C9E95_RS17065;old_locus_tag=C9E95_17480 NZ_PYJW01000143.1 Protein Homology CDS 126287 127780 . + 0 ID=cds-WP_000261287.1;Parent=gene-C9E95_RS17065;Dbxref=GenBank:WP_000261287.1;Name=WP_000261287.1;gbkey=CDS;gene=spiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460359.1;locus_tag=C9E95_RS17065;product=SPI-2 type III secretion system protein SpiA;protein_id=WP_000261287.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 127761 128972 . + . ID=gene-C9E95_RS17070;Name=ssaD;gbkey=Gene;gene=ssaD;gene_biotype=protein_coding;locus_tag=C9E95_RS17070;old_locus_tag=C9E95_17485 NZ_PYJW01000143.1 Protein Homology CDS 127761 128972 . + 0 ID=cds-WP_000323784.1;Parent=gene-C9E95_RS17070;Dbxref=GenBank:WP_000323784.1;Name=WP_000323784.1;gbkey=CDS;gene=ssaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460360.1;locus_tag=C9E95_RS17070;product=SctD family type III secretion system inner membrane ring subunit SsaD;protein_id=WP_000323784.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 128980 129222 . + . ID=gene-C9E95_RS17075;Name=ssaE;gbkey=Gene;gene=ssaE;gene_biotype=protein_coding;locus_tag=C9E95_RS17075;old_locus_tag=C9E95_17490 NZ_PYJW01000143.1 Protein Homology CDS 128980 129222 . + 0 ID=cds-WP_000210204.1;Parent=gene-C9E95_RS17075;Dbxref=GenBank:WP_000210204.1;Name=WP_000210204.1;gbkey=CDS;gene=ssaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460361.1;locus_tag=C9E95_RS17075;product=YscE family type III secretion system co-chaperone SsaE;protein_id=WP_000210204.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 129486 129812 . + . ID=gene-C9E95_RS17080;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=C9E95_RS17080;old_locus_tag=C9E95_17495 NZ_PYJW01000143.1 Protein Homology CDS 129486 129812 . + 0 ID=cds-WP_000972855.1;Parent=gene-C9E95_RS17080;Dbxref=GenBank:WP_000972855.1;Name=WP_000972855.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460362.1;locus_tag=C9E95_RS17080;product=SPI-2 type III secretion system chaperone SseA;protein_id=WP_000972855.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 129819 130409 . + . ID=gene-C9E95_RS17085;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=C9E95_RS17085;old_locus_tag=C9E95_17500 NZ_PYJW01000143.1 Protein Homology CDS 129819 130409 . + 0 ID=cds-WP_000094429.1;Parent=gene-C9E95_RS17085;Dbxref=GenBank:WP_000094429.1;Name=WP_000094429.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460363.1;locus_tag=C9E95_RS17085;product=SPI-2 type III secretion system translocon protein SseB;protein_id=WP_000094429.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 130406 130879 . + . ID=gene-C9E95_RS17090;Name=sscA;gbkey=Gene;gene=sscA;gene_biotype=protein_coding;locus_tag=C9E95_RS17090;old_locus_tag=C9E95_17505 NZ_PYJW01000143.1 Protein Homology CDS 130406 130879 . + 0 ID=cds-WP_080203994.1;Parent=gene-C9E95_RS17090;Dbxref=GenBank:WP_080203994.1;Name=WP_080203994.1;gbkey=CDS;gene=sscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460364.1;locus_tag=C9E95_RS17090;product=SycD/LcrH family type III secretion system chaperone SscA;protein_id=WP_080203994.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 130881 132335 . + . ID=gene-C9E95_RS17095;Name=sseC;gbkey=Gene;gene=sseC;gene_biotype=protein_coding;locus_tag=C9E95_RS17095;old_locus_tag=C9E95_17510 NZ_PYJW01000143.1 Protein Homology CDS 130881 132335 . + 0 ID=cds-WP_080203993.1;Parent=gene-C9E95_RS17095;Dbxref=GenBank:WP_080203993.1;Name=WP_080203993.1;gbkey=CDS;gene=sseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460365.1;locus_tag=C9E95_RS17095;product=SPI-2 type III secretion system translocon protein SseC;protein_id=WP_080203993.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 132351 132938 . + . ID=gene-C9E95_RS17100;Name=sseD;gbkey=Gene;gene=sseD;gene_biotype=protein_coding;locus_tag=C9E95_RS17100;old_locus_tag=C9E95_17515 NZ_PYJW01000143.1 Protein Homology CDS 132351 132938 . + 0 ID=cds-WP_000388323.1;Parent=gene-C9E95_RS17100;Dbxref=GenBank:WP_000388323.1;Name=WP_000388323.1;gbkey=CDS;gene=sseD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460366.1;locus_tag=C9E95_RS17100;product=SPI-2 type III secretion system translocon protein SseD;protein_id=WP_000388323.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 132941 133357 . + . ID=gene-C9E95_RS17105;Name=sseE;gbkey=Gene;gene=sseE;gene_biotype=protein_coding;locus_tag=C9E95_RS17105;old_locus_tag=C9E95_17520 NZ_PYJW01000143.1 Protein Homology CDS 132941 133357 . + 0 ID=cds-WP_000249605.1;Parent=gene-C9E95_RS17105;Dbxref=GenBank:WP_000249605.1;Name=WP_000249605.1;gbkey=CDS;gene=sseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460367.1;locus_tag=C9E95_RS17105;product=LcrR family type III secretion system chaperone SseE;protein_id=WP_000249605.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 133409 133843 . + . ID=gene-C9E95_RS17110;Name=sscB;gbkey=Gene;gene=sscB;gene_biotype=protein_coding;locus_tag=C9E95_RS17110;old_locus_tag=C9E95_17525 NZ_PYJW01000143.1 Protein Homology CDS 133409 133843 . + 0 ID=cds-WP_000979963.1;Parent=gene-C9E95_RS17110;Dbxref=GenBank:WP_000979963.1;Name=WP_000979963.1;gbkey=CDS;gene=sscB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460368.1;locus_tag=C9E95_RS17110;product=SycD/LcrH family type III secretion system chaperone SscB;protein_id=WP_000979963.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 133859 134641 . + . ID=gene-C9E95_RS17115;Name=sseF;gbkey=Gene;gene=sseF;gene_biotype=protein_coding;locus_tag=C9E95_RS17115;old_locus_tag=C9E95_17530 NZ_PYJW01000143.1 Protein Homology CDS 133859 134641 . + 0 ID=cds-WP_023182098.1;Parent=gene-C9E95_RS17115;Dbxref=GenBank:WP_023182098.1;Name=WP_023182098.1;gbkey=CDS;gene=sseF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460369.1;locus_tag=C9E95_RS17115;product=type III secretion systems effector SseF;protein_id=WP_023182098.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 134638 135327 . + . ID=gene-C9E95_RS17120;Name=sseG;gbkey=Gene;gene=sseG;gene_biotype=protein_coding;locus_tag=C9E95_RS17120;old_locus_tag=C9E95_17535 NZ_PYJW01000143.1 Protein Homology CDS 134638 135327 . + 0 ID=cds-WP_000805846.1;Parent=gene-C9E95_RS17120;Dbxref=GenBank:WP_000805846.1;Name=WP_000805846.1;Note=SseG%2C from Salmonella pathogenicity island 2%2C is a type III secretion system (T3SS) effector protein.;gbkey=CDS;gene=sseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460370.1;locus_tag=C9E95_RS17120;product=pathogenicity island 2 effector protein SseG;protein_id=WP_000805846.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 135421 135636 . + . ID=gene-C9E95_RS17125;Name=ssaG;gbkey=Gene;gene=ssaG;gene_biotype=protein_coding;locus_tag=C9E95_RS17125;old_locus_tag=C9E95_17540 NZ_PYJW01000143.1 Protein Homology CDS 135421 135636 . + 0 ID=cds-WP_000350226.1;Parent=gene-C9E95_RS17125;Dbxref=GenBank:WP_000350226.1;Name=WP_000350226.1;gbkey=CDS;gene=ssaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460371.1;locus_tag=C9E95_RS17125;product=type III secretion system needle filament protein SsaG;protein_id=WP_000350226.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 135614 135904 . + . ID=gene-C9E95_RS17130;Name=C9E95_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17130;old_locus_tag=C9E95_17545 NZ_PYJW01000143.1 Protein Homology CDS 135614 135904 . + 0 ID=cds-WP_000444713.1;Parent=gene-C9E95_RS17130;Dbxref=GenBank:WP_000444713.1;Name=WP_000444713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531123.1;locus_tag=C9E95_RS17130;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=WP_000444713.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 135916 136164 . + . ID=gene-C9E95_RS17135;Name=ssaI;gbkey=Gene;gene=ssaI;gene_biotype=protein_coding;locus_tag=C9E95_RS17135;old_locus_tag=C9E95_17550 NZ_PYJW01000143.1 Protein Homology CDS 135916 136164 . + 0 ID=cds-WP_001574409.1;Parent=gene-C9E95_RS17135;Dbxref=GenBank:WP_001574409.1;Name=WP_001574409.1;gbkey=CDS;gene=ssaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460373.1;locus_tag=C9E95_RS17135;product=SctI family type III secretion system inner rod subunit SsaI;protein_id=WP_001574409.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 136161 136910 . + . ID=gene-C9E95_RS17140;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=protein_coding;locus_tag=C9E95_RS17140;old_locus_tag=C9E95_17555 NZ_PYJW01000143.1 Protein Homology CDS 136161 136910 . + 0 ID=cds-WP_000862878.1;Parent=gene-C9E95_RS17140;Dbxref=GenBank:WP_000862878.1;Name=WP_000862878.1;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460374.1;locus_tag=C9E95_RS17140;product=SPI-2 type III secretion system apparatus lipoprotein SsaJ;protein_id=WP_000862878.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 136928 137476 . + . ID=gene-C9E95_RS17145;Name=C9E95_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17145;old_locus_tag=C9E95_17560 NZ_PYJW01000143.1 Protein Homology CDS 136928 137476 . + 0 ID=cds-WP_001531605.1;Parent=gene-C9E95_RS17145;Dbxref=GenBank:WP_001531605.1;Name=WP_001531605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460375.1;locus_tag=C9E95_RS17145;product=type III secretion system domain-containing protein;protein_id=WP_001531605.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 137473 138147 . + . ID=gene-C9E95_RS17150;Name=ssaK;gbkey=Gene;gene=ssaK;gene_biotype=protein_coding;locus_tag=C9E95_RS17150;old_locus_tag=C9E95_17565 NZ_PYJW01000143.1 Protein Homology CDS 137473 138147 . + 0 ID=cds-WP_000011203.1;Parent=gene-C9E95_RS17150;Dbxref=GenBank:WP_000011203.1;Name=WP_000011203.1;gbkey=CDS;gene=ssaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460376.1;locus_tag=C9E95_RS17150;product=SPI-2 type III secretion system apparatus protein SsaK;protein_id=WP_000011203.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 138113 139129 . + . ID=gene-C9E95_RS17155;Name=ssaL;gbkey=Gene;gene=ssaL;gene_biotype=protein_coding;locus_tag=C9E95_RS17155;old_locus_tag=C9E95_17570 NZ_PYJW01000143.1 Protein Homology CDS 138113 139129 . + 0 ID=cds-WP_080203992.1;Parent=gene-C9E95_RS17155;Dbxref=GenBank:WP_080203992.1;Name=WP_080203992.1;gbkey=CDS;gene=ssaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460377.1;locus_tag=C9E95_RS17155;product=SPI-2 type III secretion system apparatus protein SsaL;protein_id=WP_080203992.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 139187 139555 . + . ID=gene-C9E95_RS17160;Name=ssaM;gbkey=Gene;gene=ssaM;gene_biotype=protein_coding;locus_tag=C9E95_RS17160;old_locus_tag=C9E95_17575 NZ_PYJW01000143.1 Protein Homology CDS 139187 139555 . + 0 ID=cds-WP_000383702.1;Parent=gene-C9E95_RS17160;Dbxref=GenBank:WP_000383702.1;Name=WP_000383702.1;gbkey=CDS;gene=ssaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460378.1;locus_tag=C9E95_RS17160;product=SPI-2 type III secretion system apparatus protein SsaM;protein_id=WP_000383702.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 139540 141585 . + . ID=gene-C9E95_RS17165;Name=ssaV;gbkey=Gene;gene=ssaV;gene_biotype=protein_coding;locus_tag=C9E95_RS17165;old_locus_tag=C9E95_17580 NZ_PYJW01000143.1 Protein Homology CDS 139540 141585 . + 0 ID=cds-WP_001258233.1;Parent=gene-C9E95_RS17165;Dbxref=GenBank:WP_001258233.1;Name=WP_001258233.1;gbkey=CDS;gene=ssaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460379.1;locus_tag=C9E95_RS17165;product=SPI-2 type III secretion system apparatus protein SsaV;protein_id=WP_001258233.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 141575 142876 . + . ID=gene-C9E95_RS17170;Name=ssaN;gbkey=Gene;gene=ssaN;gene_biotype=protein_coding;locus_tag=C9E95_RS17170;old_locus_tag=C9E95_17585 NZ_PYJW01000143.1 Protein Homology CDS 141575 142876 . + 0 ID=cds-WP_000787213.1;Parent=gene-C9E95_RS17170;Dbxref=GenBank:WP_000787213.1;Name=WP_000787213.1;gbkey=CDS;gene=ssaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460380.1;locus_tag=C9E95_RS17170;product=SctN family type III secretion system ATPase SsaN;protein_id=WP_000787213.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 142879 143256 . + . ID=gene-C9E95_RS17175;Name=ssaO;gbkey=Gene;gene=ssaO;gene_biotype=protein_coding;locus_tag=C9E95_RS17175;old_locus_tag=C9E95_17590 NZ_PYJW01000143.1 Protein Homology CDS 142879 143256 . + 0 ID=cds-WP_000449089.1;Parent=gene-C9E95_RS17175;Dbxref=GenBank:WP_000449089.1;Name=WP_000449089.1;gbkey=CDS;gene=ssaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460381.1;locus_tag=C9E95_RS17175;product=SPI-2 type III secretion system apparatus protein SsaO;protein_id=WP_000449089.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 143237 143611 . + . ID=gene-C9E95_RS17180;Name=ssaP;gbkey=Gene;gene=ssaP;gene_biotype=protein_coding;locus_tag=C9E95_RS17180;old_locus_tag=C9E95_17595 NZ_PYJW01000143.1 Protein Homology CDS 143237 143611 . + 0 ID=cds-WP_001223313.1;Parent=gene-C9E95_RS17180;Dbxref=GenBank:WP_001223313.1;Name=WP_001223313.1;gbkey=CDS;gene=ssaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460382.1;locus_tag=C9E95_RS17180;product=SPI-2 type III secretion system apparatus protein SsaP;protein_id=WP_001223313.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 143592 144560 . + . ID=gene-C9E95_RS17185;Name=ssaQ;gbkey=Gene;gene=ssaQ;gene_biotype=protein_coding;locus_tag=C9E95_RS17185;old_locus_tag=C9E95_17600 NZ_PYJW01000143.1 Protein Homology CDS 143592 144560 . + 0 ID=cds-WP_000944191.1;Parent=gene-C9E95_RS17185;Dbxref=GenBank:WP_000944191.1;Name=WP_000944191.1;gbkey=CDS;gene=ssaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460383.1;locus_tag=C9E95_RS17185;product=SPI-2 type III secretion system cytoplasmic ring protein SsaQ;protein_id=WP_000944191.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 144628 145275 . + . ID=gene-C9E95_RS17190;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;locus_tag=C9E95_RS17190;old_locus_tag=C9E95_17605 NZ_PYJW01000143.1 Protein Homology CDS 144628 145275 . + 0 ID=cds-WP_000056367.1;Parent=gene-C9E95_RS17190;Dbxref=GenBank:WP_000056367.1;Name=WP_000056367.1;gbkey=CDS;gene=ssaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460384.1;locus_tag=C9E95_RS17190;product=SPI-2 type III secretion system export apparatus protein SsaR;protein_id=WP_000056367.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 145272 145538 . + . ID=gene-C9E95_RS17195;Name=ssas;gbkey=Gene;gene=ssas;gene_biotype=protein_coding;locus_tag=C9E95_RS17195;old_locus_tag=C9E95_17610 NZ_PYJW01000143.1 Protein Homology CDS 145272 145538 . + 0 ID=cds-WP_000999982.1;Parent=gene-C9E95_RS17195;Dbxref=GenBank:WP_000999982.1;Name=WP_000999982.1;gbkey=CDS;gene=ssas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460385.1;locus_tag=C9E95_RS17195;product=SPI-2 type III secretion system apparatus protein SsaS;protein_id=WP_000999982.1;transl_table=11 NZ_PYJW01000143.1 RefSeq gene 145539 146318 . + . ID=gene-C9E95_RS17200;Name=ssaT;gbkey=Gene;gene=ssaT;gene_biotype=protein_coding;locus_tag=C9E95_RS17200;old_locus_tag=C9E95_17615 NZ_PYJW01000143.1 Protein Homology CDS 145539 146318 . + 0 ID=cds-WP_000068760.1;Parent=gene-C9E95_RS17200;Dbxref=GenBank:WP_000068760.1;Name=WP_000068760.1;gbkey=CDS;gene=ssaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460386.1;locus_tag=C9E95_RS17200;product=SPI-2 type III secretion system apparatus protein SsaT;protein_id=WP_000068760.1;transl_table=11 NZ_PYJW01000143.1 RefSeq pseudogene 146315 146988 . + . ID=gene-C9E95_RS17205;Name=ssaU;end_range=146988,.;gbkey=Gene;gene=ssaU;gene_biotype=pseudogene;locus_tag=C9E95_RS17205;old_locus_tag=C9E95_17620;partial=true;pseudo=true NZ_PYJW01000143.1 Protein Homology CDS 146315 146988 . + 0 ID=cds-C9E95_RS17205;Parent=gene-C9E95_RS17205;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=146988,.;gbkey=CDS;gene=ssaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460387.1;locus_tag=C9E95_RS17205;partial=true;product=SPI-2 type III secretion system apparatus protein SsaU;pseudo=true;transl_table=11 ##sequence-region NZ_PYJW01000016.1 1 771 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000016.1 RefSeq region 1 771 . + . ID=NZ_PYJW01000016.1:1..771;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000016.1 RefSeq pseudogene 1 550 . - . ID=gene-C9E95_RS01045;Name=C9E95_RS01045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS01045;old_locus_tag=C9E95_01060;partial=true;pseudo=true;start_range=.,1 NZ_PYJW01000016.1 Protein Homology CDS 1 550 . - 0 ID=cds-C9E95_RS01045;Parent=gene-C9E95_RS01045;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462381.1;locus_tag=C9E95_RS01045;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJW01000135.1 1 51807 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000135.1 RefSeq region 1 51807 . + . ID=NZ_PYJW01000135.1:1..51807;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000135.1 RefSeq gene 104 1504 . - . ID=gene-C9E95_RS13930;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=C9E95_RS13930;old_locus_tag=C9E95_14295 NZ_PYJW01000135.1 Protein Homology CDS 104 1504 . - 0 ID=cds-WP_000117870.1;Parent=gene-C9E95_RS13930;Dbxref=GenBank:WP_000117870.1;Name=WP_000117870.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=C9E95_RS13930;product=asparagine--tRNA ligase;protein_id=WP_000117870.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 1705 2166 . - . ID=gene-C9E95_RS13935;Name=C9E95_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13935;old_locus_tag=C9E95_14300 NZ_PYJW01000135.1 Protein Homology CDS 1705 2166 . - 0 ID=cds-WP_000762342.1;Parent=gene-C9E95_RS13935;Dbxref=GenBank:WP_000762342.1;Name=WP_000762342.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459976.1;locus_tag=C9E95_RS13935;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_000762342.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 2483 3697 . + . ID=gene-C9E95_RS13945;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=C9E95_RS13945;old_locus_tag=C9E95_14310 NZ_PYJW01000135.1 Protein Homology CDS 2483 3697 . + 0 ID=cds-WP_020438006.1;Parent=gene-C9E95_RS13945;Dbxref=GenBank:WP_020438006.1;Name=WP_020438006.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459977.1;locus_tag=C9E95_RS13945;product=diaminopropionate ammonia-lyase;protein_id=WP_020438006.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 3943 5376 . + . ID=gene-C9E95_RS13950;Name=C9E95_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13950;old_locus_tag=C9E95_14315 NZ_PYJW01000135.1 Protein Homology CDS 3943 5376 . + 0 ID=cds-WP_000893191.1;Parent=gene-C9E95_RS13950;Dbxref=GenBank:WP_000893191.1;Name=WP_000893191.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524705.1;locus_tag=C9E95_RS13950;product=alanine/glycine:cation symporter family protein;protein_id=WP_000893191.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 5457 6659 . - . ID=gene-C9E95_RS13955;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=C9E95_RS13955;old_locus_tag=C9E95_14320 NZ_PYJW01000135.1 Protein Homology CDS 5457 6659 . - 0 ID=cds-WP_080204057.1;Parent=gene-C9E95_RS13955;Dbxref=GenBank:WP_080204057.1;Name=WP_080204057.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459979.1;locus_tag=C9E95_RS13955;product=nicotinate phosphoribosyltransferase;protein_id=WP_080204057.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 6854 8146 . - . ID=gene-C9E95_RS13960;Name=int;gbkey=Gene;gene=int;gene_biotype=protein_coding;locus_tag=C9E95_RS13960;old_locus_tag=C9E95_14325 NZ_PYJW01000135.1 Protein Homology CDS 6854 8146 . - 0 ID=cds-WP_001262307.1;Parent=gene-C9E95_RS13960;Dbxref=GenBank:WP_001262307.1;Name=WP_001262307.1;gbkey=CDS;gene=int;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459980.1;locus_tag=C9E95_RS13960;product=FimB-specific integrase Int;protein_id=WP_001262307.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 8191 8439 . - . ID=gene-C9E95_RS13965;Name=xis;gbkey=Gene;gene=xis;gene_biotype=protein_coding;locus_tag=C9E95_RS13965;old_locus_tag=C9E95_14330 NZ_PYJW01000135.1 Protein Homology CDS 8191 8439 . - 0 ID=cds-WP_000065276.1;Parent=gene-C9E95_RS13965;Dbxref=GenBank:WP_000065276.1;Name=WP_000065276.1;gbkey=CDS;gene=xis;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459981.1;locus_tag=C9E95_RS13965;product=excisionase Xis;protein_id=WP_000065276.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 8480 8719 . - . ID=gene-C9E95_RS13970;Name=C9E95_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13970;old_locus_tag=C9E95_14335 NZ_PYJW01000135.1 Protein Homology CDS 8480 8719 . - 0 ID=cds-WP_001237031.1;Parent=gene-C9E95_RS13970;Dbxref=GenBank:WP_001237031.1;Name=WP_001237031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459982.1;locus_tag=C9E95_RS13970;product=DUF4060 family protein;protein_id=WP_001237031.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 8762 9919 . - . ID=gene-C9E95_RS13975;Name=C9E95_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13975;old_locus_tag=C9E95_14340 NZ_PYJW01000135.1 Protein Homology CDS 8762 9919 . - 0 ID=cds-WP_080183590.1;Parent=gene-C9E95_RS13975;Dbxref=GenBank:WP_080183590.1;Name=WP_080183590.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459983.3;locus_tag=C9E95_RS13975;product=RecT family recombinase;protein_id=WP_080183590.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 9882 12797 . - . ID=gene-C9E95_RS13980;Name=C9E95_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13980;old_locus_tag=C9E95_14345 NZ_PYJW01000135.1 Protein Homology CDS 9882 12797 . - 0 ID=cds-WP_135369856.1;Parent=gene-C9E95_RS13980;Dbxref=GenBank:WP_135369856.1;Name=WP_135369856.1;Ontology_term=GO:0090304,GO:0051908;gbkey=CDS;go_function=double-stranded DNA 5'-3' DNA exonuclease activity|0051908||IEA;go_process=nucleic acid metabolic process|0090304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000394221.1;locus_tag=C9E95_RS13980;product=RecE family exodeoxyribonuclease;protein_id=WP_135369856.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 12938 13108 . - . ID=gene-C9E95_RS23200;Name=C9E95_RS23200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23200 NZ_PYJW01000135.1 Protein Homology CDS 12938 13108 . - 0 ID=cds-WP_000917690.1;Parent=gene-C9E95_RS23200;Dbxref=GenBank:WP_000917690.1;Name=WP_000917690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000917690.1;locus_tag=C9E95_RS23200;product=YdaE family protein;protein_id=WP_000917690.1;transl_table=11 NZ_PYJW01000135.1 RefSeq pseudogene 13101 13367 . - . ID=gene-C9E95_RS23520;Name=C9E95_RS23520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23520;pseudo=true NZ_PYJW01000135.1 Protein Homology CDS 13101 13367 . - 0 ID=cds-C9E95_RS23520;Parent=gene-C9E95_RS23520;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461564.1;locus_tag=C9E95_RS23520;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 13411 13821 . - . ID=gene-C9E95_RS13985;Name=C9E95_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13985;old_locus_tag=C9E95_14350 NZ_PYJW01000135.1 Protein Homology CDS 13411 13821 . - 0 ID=cds-WP_001038966.1;Parent=gene-C9E95_RS13985;Dbxref=GenBank:WP_001038966.1;Name=WP_001038966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459987.1;locus_tag=C9E95_RS13985;product=helix-turn-helix domain-containing protein;protein_id=WP_001038966.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 13941 14180 . + . ID=gene-C9E95_RS13990;Name=C9E95_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13990;old_locus_tag=C9E95_14355 NZ_PYJW01000135.1 Protein Homology CDS 13941 14180 . + 0 ID=cds-WP_079795724.1;Parent=gene-C9E95_RS13990;Dbxref=GenBank:WP_079795724.1;Name=WP_079795724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000370145.1;locus_tag=C9E95_RS13990;product=hypothetical protein;protein_id=WP_079795724.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 14200 14520 . + . ID=gene-C9E95_RS13995;Name=C9E95_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13995;old_locus_tag=C9E95_14360 NZ_PYJW01000135.1 Protein Homology CDS 14200 14520 . + 0 ID=cds-WP_000426364.1;Parent=gene-C9E95_RS13995;Dbxref=GenBank:WP_000426364.1;Name=WP_000426364.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459988.1;locus_tag=C9E95_RS13995;product=CII family transcriptional regulator;protein_id=WP_000426364.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 14612 15448 . + . ID=gene-C9E95_RS14000;Name=C9E95_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14000;old_locus_tag=C9E95_14365 NZ_PYJW01000135.1 Protein Homology CDS 14612 15448 . + 0 ID=cds-WP_079986387.1;Parent=gene-C9E95_RS14000;Dbxref=GenBank:WP_079986387.1;Name=WP_079986387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000024043.1;locus_tag=C9E95_RS14000;product=replication protein;protein_id=WP_079986387.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 15445 16140 . + . ID=gene-C9E95_RS14005;Name=C9E95_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14005;old_locus_tag=C9E95_14370 NZ_PYJW01000135.1 Protein Homology CDS 15445 16140 . + 0 ID=cds-WP_079986388.1;Parent=gene-C9E95_RS14005;Dbxref=GenBank:WP_079986388.1;Name=WP_079986388.1;Ontology_term=GO:0006270;gbkey=CDS;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801766.1;locus_tag=C9E95_RS14005;product=replication protein P;protein_id=WP_079986388.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 16152 16481 . + . ID=gene-C9E95_RS14010;Name=C9E95_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14010;old_locus_tag=C9E95_14375 NZ_PYJW01000135.1 Protein Homology CDS 16152 16481 . + 0 ID=cds-WP_245306710.1;Parent=gene-C9E95_RS14010;Dbxref=GenBank:WP_245306710.1;Name=WP_245306710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000092363.1;locus_tag=C9E95_RS14010;product=DNA-binding protein;protein_id=WP_245306710.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 16717 17757 . + . ID=gene-C9E95_RS14015;Name=C9E95_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14015;old_locus_tag=C9E95_14380 NZ_PYJW01000135.1 Protein Homology CDS 16717 17757 . + 0 ID=cds-WP_079986389.1;Parent=gene-C9E95_RS14015;Dbxref=GenBank:WP_079986389.1;Name=WP_079986389.1;Ontology_term=GO:0006304,GO:0003677,GO:0003886,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA (cytosine-5-)-methyltransferase activity|0003886||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004953069.1;locus_tag=C9E95_RS14015;product=DNA cytosine methyltransferase;protein_id=WP_079986389.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 17750 19735 . + . ID=gene-C9E95_RS14020;Name=C9E95_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14020;old_locus_tag=C9E95_14385 NZ_PYJW01000135.1 Protein Homology CDS 17750 19735 . + 0 ID=cds-WP_167850621.1;Parent=gene-C9E95_RS14020;Dbxref=GenBank:WP_167850621.1;Name=WP_167850621.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024977.6;locus_tag=C9E95_RS14020;product=ATP-binding protein;protein_id=WP_167850621.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 19895 20128 . + . ID=gene-C9E95_RS14025;Name=C9E95_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14025;old_locus_tag=C9E95_14390 NZ_PYJW01000135.1 Protein Homology CDS 19895 20128 . + 0 ID=cds-WP_001217669.1;Parent=gene-C9E95_RS14025;Dbxref=GenBank:WP_001217669.1;Name=WP_001217669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459994.1;locus_tag=C9E95_RS14025;product=DinI family protein;protein_id=WP_001217669.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 20543 21145 . + . ID=gene-C9E95_RS14035;Name=C9E95_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14035;old_locus_tag=C9E95_14400 NZ_PYJW01000135.1 Protein Homology CDS 20543 21145 . + 0 ID=cds-WP_000929790.1;Parent=gene-C9E95_RS14035;Dbxref=GenBank:WP_000929790.1;Name=WP_000929790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459995.1;locus_tag=C9E95_RS14035;product=DUF1367 family protein;protein_id=WP_000929790.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 21145 21351 . + . ID=gene-C9E95_RS23525;Name=C9E95_RS23525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23525;old_locus_tag=C9E95_14405 NZ_PYJW01000135.1 Protein Homology CDS 21145 21351 . + 0 ID=cds-WP_001241019.1;Parent=gene-C9E95_RS23525;Dbxref=GenBank:WP_001241019.1;Name=WP_001241019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528771.1;locus_tag=C9E95_RS23525;product=hypothetical protein;protein_id=WP_001241019.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 21354 21965 . + . ID=gene-C9E95_RS14045;Name=C9E95_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14045;old_locus_tag=C9E95_14410 NZ_PYJW01000135.1 Protein Homology CDS 21354 21965 . + 0 ID=cds-WP_058653429.1;Parent=gene-C9E95_RS14045;Dbxref=GenBank:WP_058653429.1;Name=WP_058653429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461554.1;locus_tag=C9E95_RS14045;product=recombination protein NinG;protein_id=WP_058653429.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 21962 22102 . + . ID=gene-C9E95_RS14050;Name=C9E95_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14050;old_locus_tag=C9E95_14415 NZ_PYJW01000135.1 Protein Homology CDS 21962 22102 . + 0 ID=cds-WP_000801757.1;Parent=gene-C9E95_RS14050;Dbxref=GenBank:WP_000801757.1;Name=WP_000801757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461553.1;locus_tag=C9E95_RS14050;product=YlcG family protein;protein_id=WP_000801757.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 22099 22776 . + . ID=gene-C9E95_RS14055;Name=C9E95_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14055;old_locus_tag=C9E95_14420 NZ_PYJW01000135.1 Protein Homology CDS 22099 22776 . + 0 ID=cds-WP_044782379.1;Parent=gene-C9E95_RS14055;Dbxref=GenBank:WP_044782379.1;Name=WP_044782379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461552.1;locus_tag=C9E95_RS14055;product=bacteriophage antitermination protein Q;protein_id=WP_044782379.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 23049 23612 . + . ID=gene-C9E95_RS14065;Name=C9E95_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14065;old_locus_tag=C9E95_14430 NZ_PYJW01000135.1 Protein Homology CDS 23049 23612 . + 0 ID=cds-WP_045718200.1;Parent=gene-C9E95_RS14065;Dbxref=GenBank:WP_045718200.1;Name=WP_045718200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461551.1;locus_tag=C9E95_RS14065;product=ORF6N domain-containing protein;protein_id=WP_045718200.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 23824 23949 . + . ID=gene-C9E95_RS14070;Name=C9E95_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14070;old_locus_tag=C9E95_14435 NZ_PYJW01000135.1 Protein Homology CDS 23824 23949 . + 0 ID=cds-WP_001534733.1;Parent=gene-C9E95_RS14070;Dbxref=GenBank:WP_001534733.1;Name=WP_001534733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459999.1;locus_tag=C9E95_RS14070;product=hypothetical protein;protein_id=WP_001534733.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 24085 24534 . - . ID=gene-C9E95_RS14075;Name=C9E95_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14075;old_locus_tag=C9E95_14440 NZ_PYJW01000135.1 Protein Homology CDS 24085 24534 . - 0 ID=cds-WP_023251956.1;Parent=gene-C9E95_RS14075;Dbxref=GenBank:WP_023251956.1;Name=WP_023251956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460000.1;locus_tag=C9E95_RS14075;product=hypothetical protein;protein_id=WP_023251956.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 24751 25140 . + . ID=gene-C9E95_RS14080;Name=C9E95_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14080;old_locus_tag=C9E95_14445 NZ_PYJW01000135.1 Protein Homology CDS 24751 25140 . + 0 ID=cds-WP_001294875.1;Parent=gene-C9E95_RS14080;Dbxref=GenBank:WP_001294875.1;Name=WP_001294875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001294874.1;locus_tag=C9E95_RS14080;product=phage holin family protein;protein_id=WP_001294875.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 25127 25408 . + . ID=gene-C9E95_RS14085;Name=C9E95_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14085;old_locus_tag=C9E95_14450 NZ_PYJW01000135.1 Protein Homology CDS 25127 25408 . + 0 ID=cds-WP_021000643.1;Parent=gene-C9E95_RS14085;Dbxref=GenBank:WP_021000643.1;Name=WP_021000643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004899663.1;locus_tag=C9E95_RS14085;product=phage holin family protein;protein_id=WP_021000643.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 25408 26022 . + . ID=gene-C9E95_RS14090;Name=C9E95_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14090;old_locus_tag=C9E95_14455 NZ_PYJW01000135.1 Protein Homology CDS 25408 26022 . + 0 ID=cds-WP_052942647.1;Parent=gene-C9E95_RS14090;Dbxref=GenBank:WP_052942647.1;Name=WP_052942647.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459884.1;locus_tag=C9E95_RS14090;product=glycoside hydrolase family 19 protein;protein_id=WP_052942647.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 26019 26561 . + . ID=gene-C9E95_RS14095;Name=C9E95_RS14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14095;old_locus_tag=C9E95_14460 NZ_PYJW01000135.1 Protein Homology CDS 26019 26561 . + 0 ID=cds-WP_000636436.1;Parent=gene-C9E95_RS14095;Dbxref=GenBank:WP_000636436.1;Name=WP_000636436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000636436.1;locus_tag=C9E95_RS14095;product=DUF2514 family protein;protein_id=WP_000636436.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 26664 27167 . + . ID=gene-C9E95_RS14100;Name=C9E95_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14100;old_locus_tag=C9E95_14465 NZ_PYJW01000135.1 Protein Homology CDS 26664 27167 . + 0 ID=cds-WP_023136440.1;Parent=gene-C9E95_RS14100;Dbxref=GenBank:WP_023136440.1;Name=WP_023136440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252716.1;locus_tag=C9E95_RS14100;product=hypothetical protein;protein_id=WP_023136440.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 27190 27381 . + . ID=gene-C9E95_RS14105;Name=C9E95_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14105;old_locus_tag=C9E95_14470 NZ_PYJW01000135.1 GeneMarkS-2+ CDS 27190 27381 . + 0 ID=cds-WP_023223569.1;Parent=gene-C9E95_RS14105;Dbxref=GenBank:WP_023223569.1;Name=WP_023223569.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS14105;product=hypothetical protein;protein_id=WP_023223569.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 27426 27971 . + . ID=gene-C9E95_RS14110;Name=C9E95_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14110;old_locus_tag=C9E95_14475 NZ_PYJW01000135.1 Protein Homology CDS 27426 27971 . + 0 ID=cds-WP_001102153.1;Parent=gene-C9E95_RS14110;Dbxref=GenBank:WP_001102153.1;Name=WP_001102153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461545.2;locus_tag=C9E95_RS14110;product=terminase small subunit;protein_id=WP_001102153.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 27943 29874 . + . ID=gene-C9E95_RS14115;Name=C9E95_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14115;old_locus_tag=C9E95_14480 NZ_PYJW01000135.1 Protein Homology CDS 27943 29874 . + 0 ID=cds-WP_000623088.1;Parent=gene-C9E95_RS14115;Dbxref=GenBank:WP_000623088.1;Name=WP_000623088.1;Ontology_term=GO:0004519,GO:0005524,GO:0016887;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461544.1;locus_tag=C9E95_RS14115;product=phage terminase large subunit family protein;protein_id=WP_000623088.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 29858 30061 . + . ID=gene-C9E95_RS14120;Name=C9E95_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14120;old_locus_tag=C9E95_14485 NZ_PYJW01000135.1 Protein Homology CDS 29858 30061 . + 0 ID=cds-WP_000201415.1;Parent=gene-C9E95_RS14120;Dbxref=GenBank:WP_000201415.1;Name=WP_000201415.1;Ontology_term=GO:0019058;gbkey=CDS;go_process=viral life cycle|0019058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461543.1;locus_tag=C9E95_RS14120;product=phage head-tail joining protein;protein_id=WP_000201415.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 30058 31638 . + . ID=gene-C9E95_RS14125;Name=C9E95_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14125;old_locus_tag=C9E95_14490 NZ_PYJW01000135.1 Protein Homology CDS 30058 31638 . + 0 ID=cds-WP_000831821.1;Parent=gene-C9E95_RS14125;Dbxref=GenBank:WP_000831821.1;Name=WP_000831821.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461542.1;locus_tag=C9E95_RS14125;product=phage portal protein;protein_id=WP_000831821.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 31628 33124 . + . ID=gene-C9E95_RS14130;Name=C9E95_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14130;old_locus_tag=C9E95_14495 NZ_PYJW01000135.1 Protein Homology CDS 31628 33124 . + 0 ID=cds-WP_023251958.1;Parent=gene-C9E95_RS14130;Dbxref=GenBank:WP_023251958.1;Name=WP_023251958.1;Ontology_term=GO:0006508,GO:0008233,GO:0008236;gbkey=CDS;go_function=peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461541.1;locus_tag=C9E95_RS14130;product=S49 family peptidase;protein_id=WP_023251958.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 33137 33484 . + . ID=gene-C9E95_RS14135;Name=C9E95_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14135;old_locus_tag=C9E95_14500 NZ_PYJW01000135.1 Protein Homology CDS 33137 33484 . + 0 ID=cds-WP_135369857.1;Parent=gene-C9E95_RS14135;Dbxref=GenBank:WP_135369857.1;Name=WP_135369857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461540.1;locus_tag=C9E95_RS14135;product=head decoration protein;protein_id=WP_135369857.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 33539 34567 . + . ID=gene-C9E95_RS14140;Name=C9E95_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14140;old_locus_tag=C9E95_14505 NZ_PYJW01000135.1 Protein Homology CDS 33539 34567 . + 0 ID=cds-WP_000522566.1;Parent=gene-C9E95_RS14140;Dbxref=GenBank:WP_000522566.1;Name=WP_000522566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461539.1;locus_tag=C9E95_RS14140;product=major capsid protein;protein_id=WP_000522566.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 34625 34984 . + . ID=gene-C9E95_RS14145;Name=C9E95_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14145;old_locus_tag=C9E95_14510 NZ_PYJW01000135.1 Protein Homology CDS 34625 34984 . + 0 ID=cds-WP_023251959.1;Parent=gene-C9E95_RS14145;Dbxref=GenBank:WP_023251959.1;Name=WP_023251959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461538.1;locus_tag=C9E95_RS14145;product=DNA-packaging protein FI;protein_id=WP_023251959.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 34995 35372 . + . ID=gene-C9E95_RS14150;Name=C9E95_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14150;old_locus_tag=C9E95_14515 NZ_PYJW01000135.1 Protein Homology CDS 34995 35372 . + 0 ID=cds-WP_023251960.1;Parent=gene-C9E95_RS14150;Dbxref=GenBank:WP_023251960.1;Name=WP_023251960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083295.1;locus_tag=C9E95_RS14150;product=head-tail joining protein;protein_id=WP_023251960.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 35359 35937 . + . ID=gene-C9E95_RS14155;Name=C9E95_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14155;old_locus_tag=C9E95_14520 NZ_PYJW01000135.1 Protein Homology CDS 35359 35937 . + 0 ID=cds-WP_001534814.1;Parent=gene-C9E95_RS14155;Dbxref=GenBank:WP_001534814.1;Name=WP_001534814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461536.1;locus_tag=C9E95_RS14155;product=phage tail protein;protein_id=WP_001534814.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 35981 36382 . + . ID=gene-C9E95_RS14160;Name=C9E95_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14160;old_locus_tag=C9E95_14525 NZ_PYJW01000135.1 Protein Homology CDS 35981 36382 . + 0 ID=cds-WP_000033885.1;Parent=gene-C9E95_RS14160;Dbxref=GenBank:WP_000033885.1;Name=WP_000033885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461534.1;locus_tag=C9E95_RS14160;product=phage minor tail U family protein;protein_id=WP_000033885.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 36390 37136 . + . ID=gene-C9E95_RS14165;Name=C9E95_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14165;old_locus_tag=C9E95_14530 NZ_PYJW01000135.1 Protein Homology CDS 36390 37136 . + 0 ID=cds-WP_000971954.1;Parent=gene-C9E95_RS14165;Dbxref=GenBank:WP_000971954.1;Name=WP_000971954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461533.1;locus_tag=C9E95_RS14165;product=phage tail tube protein;protein_id=WP_000971954.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 37187 37582 . + . ID=gene-C9E95_RS14170;Name=gpG;gbkey=Gene;gene=gpG;gene_biotype=protein_coding;locus_tag=C9E95_RS14170;old_locus_tag=C9E95_14535 NZ_PYJW01000135.1 Protein Homology CDS 37187 37582 . + 0 ID=cds-WP_000479607.1;Parent=gene-C9E95_RS14170;Dbxref=GenBank:WP_000479607.1;Name=WP_000479607.1;gbkey=CDS;gene=gpG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461532.1;locus_tag=C9E95_RS14170;product=phage tail assembly chaperone G;protein_id=WP_000479607.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 37579 37917 . + . ID=gene-C9E95_RS14175;Name=C9E95_RS14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14175;old_locus_tag=C9E95_14540 NZ_PYJW01000135.1 Protein Homology CDS 37579 37917 . + 0 ID=cds-WP_010989052.1;Parent=gene-C9E95_RS14175;Dbxref=GenBank:WP_010989052.1;Name=WP_010989052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461531.1;locus_tag=C9E95_RS14175;product=phage tail assembly protein T;protein_id=WP_010989052.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 37889 40930 . + . ID=gene-C9E95_RS14180;Name=C9E95_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14180;old_locus_tag=C9E95_14545 NZ_PYJW01000135.1 Protein Homology CDS 37889 40930 . + 0 ID=cds-WP_052942650.1;Parent=gene-C9E95_RS14180;Dbxref=GenBank:WP_052942650.1;Name=WP_052942650.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006669503.1;locus_tag=C9E95_RS14180;product=phage tail tape measure protein;protein_id=WP_052942650.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 40933 41262 . + . ID=gene-C9E95_RS14185;Name=C9E95_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14185;old_locus_tag=C9E95_14550 NZ_PYJW01000135.1 Protein Homology CDS 40933 41262 . + 0 ID=cds-WP_000447369.1;Parent=gene-C9E95_RS14185;Dbxref=GenBank:WP_000447369.1;Name=WP_000447369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461529.1;locus_tag=C9E95_RS14185;product=phage tail protein;protein_id=WP_000447369.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 41272 41970 . + . ID=gene-C9E95_RS14190;Name=C9E95_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14190;old_locus_tag=C9E95_14555 NZ_PYJW01000135.1 Protein Homology CDS 41272 41970 . + 0 ID=cds-WP_001152689.1;Parent=gene-C9E95_RS14190;Dbxref=GenBank:WP_001152689.1;Name=WP_001152689.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461528.1;locus_tag=C9E95_RS14190;product=phage minor tail protein L;protein_id=WP_001152689.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 41977 42714 . + . ID=gene-C9E95_RS14195;Name=C9E95_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14195;old_locus_tag=C9E95_14560 NZ_PYJW01000135.1 Protein Homology CDS 41977 42714 . + 0 ID=cds-WP_000662740.1;Parent=gene-C9E95_RS14195;Dbxref=GenBank:WP_000662740.1;Name=WP_000662740.1;Ontology_term=GO:0006508,GO:0008234,GO:0008235,GO:0008270;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA,metalloexopeptidase activity|0008235||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000662739.1;locus_tag=C9E95_RS14195;product=C40 family peptidase;protein_id=WP_000662740.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 42612 43259 . + . ID=gene-C9E95_RS14200;Name=C9E95_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14200;old_locus_tag=C9E95_14565 NZ_PYJW01000135.1 Protein Homology CDS 42612 43259 . + 0 ID=cds-WP_023228907.1;Parent=gene-C9E95_RS14200;Dbxref=GenBank:WP_023228907.1;Name=WP_023228907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461526.1;locus_tag=C9E95_RS14200;product=tail assembly protein;protein_id=WP_023228907.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 43321 46683 . + . ID=gene-C9E95_RS14205;Name=gpJ;gbkey=Gene;gene=gpJ;gene_biotype=protein_coding;locus_tag=C9E95_RS14205;old_locus_tag=C9E95_14570 NZ_PYJW01000135.1 Protein Homology CDS 43321 46683 . + 0 ID=cds-WP_135369858.1;Parent=gene-C9E95_RS14205;Dbxref=GenBank:WP_135369858.1;Name=WP_135369858.1;gbkey=CDS;gene=gpJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461525.2;locus_tag=C9E95_RS14205;product=phage attachment tail tip protein J;protein_id=WP_135369858.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 46722 46964 . + . ID=gene-C9E95_RS14210;Name=C9E95_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14210;old_locus_tag=C9E95_14575 NZ_PYJW01000135.1 Protein Homology CDS 46722 46964 . + 0 ID=cds-WP_000178826.1;Parent=gene-C9E95_RS14210;Dbxref=GenBank:WP_000178826.1;Name=WP_000178826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178849.1;locus_tag=C9E95_RS14210;product=hypothetical protein;protein_id=WP_000178826.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 47018 49456 . + . ID=gene-C9E95_RS14215;Name=C9E95_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14215;old_locus_tag=C9E95_14580 NZ_PYJW01000135.1 Protein Homology CDS 47018 49456 . + 0 ID=cds-WP_135369859.1;Parent=gene-C9E95_RS14215;Dbxref=GenBank:WP_135369859.1;Name=WP_135369859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460024.1;locus_tag=C9E95_RS14215;product=phage tail protein;protein_id=WP_135369859.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 49453 50277 . + . ID=gene-C9E95_RS23530;Name=C9E95_RS23530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23530 NZ_PYJW01000135.1 Protein Homology CDS 49453 50277 . + 0 ID=cds-WP_217810250.1;Parent=gene-C9E95_RS23530;Dbxref=GenBank:WP_217810250.1;Name=WP_217810250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461523.1;locus_tag=C9E95_RS23530;product=macro domain-containing protein;protein_id=WP_217810250.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 50267 50848 . + . ID=gene-C9E95_RS14230;Name=C9E95_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14230;old_locus_tag=C9E95_14595 NZ_PYJW01000135.1 Protein Homology CDS 50267 50848 . + 0 ID=cds-WP_000143158.1;Parent=gene-C9E95_RS14230;Dbxref=GenBank:WP_000143158.1;Name=WP_000143158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000143158.1;locus_tag=C9E95_RS14230;product=tail fiber assembly protein;protein_id=WP_000143158.1;transl_table=11 NZ_PYJW01000135.1 RefSeq gene 51045 51767 . - . ID=gene-C9E95_RS14235;Name=sopE;gbkey=Gene;gene=sopE;gene_biotype=protein_coding;locus_tag=C9E95_RS14235;old_locus_tag=C9E95_14600 NZ_PYJW01000135.1 Protein Homology CDS 51045 51767 . - 0 ID=cds-WP_000161705.1;Parent=gene-C9E95_RS14235;Dbxref=GenBank:WP_000161705.1;Name=WP_000161705.1;gbkey=CDS;gene=sopE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000161708.1;locus_tag=C9E95_RS14235;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE;protein_id=WP_000161705.1;transl_table=11 ##sequence-region NZ_PYJW01000063.1 1 744 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000063.1 RefSeq region 1 744 . + . ID=NZ_PYJW01000063.1:1..744;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000063.1 RefSeq gene 1 744 . - . ID=gene-C9E95_RS06475;Name=C9E95_RS06475;end_range=744,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06475;old_locus_tag=C9E95_06630;partial=true;start_range=.,1 NZ_PYJW01000063.1 Protein Homology CDS 1 744 . - 2 ID=cds-WP_348631211.1;Parent=gene-C9E95_RS06475;Dbxref=GenBank:WP_348631211.1;Name=WP_348631211.1;end_range=744,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9E95_RS06475;partial=true;product=biotin/lipoyl-containing protein;protein_id=WP_348631211.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJW01000095.1 1 50901 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000095.1 RefSeq region 1 50901 . + . ID=NZ_PYJW01000095.1:1..50901;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000095.1 RefSeq gene 410 994 . + . ID=gene-C9E95_RS10215;Name=C9E95_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10215;old_locus_tag=C9E95_10465 NZ_PYJW01000095.1 Protein Homology CDS 410 994 . + 0 ID=cds-WP_023993960.1;Parent=gene-C9E95_RS10215;Dbxref=GenBank:WP_023993960.1;Name=WP_023993960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406296.1;locus_tag=C9E95_RS10215;product=fimbrial protein;protein_id=WP_023993960.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 1114 3603 . + . ID=gene-C9E95_RS10220;Name=stdB;gbkey=Gene;gene=stdB;gene_biotype=protein_coding;locus_tag=C9E95_RS10220;old_locus_tag=C9E95_10470 NZ_PYJW01000095.1 Protein Homology CDS 1114 3603 . + 0 ID=cds-WP_023993961.1;Parent=gene-C9E95_RS10220;Dbxref=GenBank:WP_023993961.1;Name=WP_023993961.1;gbkey=CDS;gene=stdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461945.1;locus_tag=C9E95_RS10220;product=fimbrial outer membrane usher protein StdB;protein_id=WP_023993961.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 3644 4387 . + . ID=gene-C9E95_RS10225;Name=stdC;gbkey=Gene;gene=stdC;gene_biotype=protein_coding;locus_tag=C9E95_RS10225;old_locus_tag=C9E95_10475 NZ_PYJW01000095.1 Protein Homology CDS 3644 4387 . + 0 ID=cds-WP_023250444.1;Parent=gene-C9E95_RS10225;Dbxref=GenBank:WP_023250444.1;Name=WP_023250444.1;gbkey=CDS;gene=stdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461944.1;locus_tag=C9E95_RS10225;product=fimbrial biogenesis chaperone StdC;protein_id=WP_023250444.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 4384 5466 . + . ID=gene-C9E95_RS10230;Name=C9E95_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10230;old_locus_tag=C9E95_10480 NZ_PYJW01000095.1 Protein Homology CDS 4384 5466 . + 0 ID=cds-WP_023993962.1;Parent=gene-C9E95_RS10230;Dbxref=GenBank:WP_023993962.1;Name=WP_023993962.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147761.1;locus_tag=C9E95_RS10230;product=fimbrial protein;protein_id=WP_023993962.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 5576 6082 . + . ID=gene-C9E95_RS10235;Name=C9E95_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10235;old_locus_tag=C9E95_10485 NZ_PYJW01000095.1 Protein Homology CDS 5576 6082 . + 0 ID=cds-WP_000093338.1;Parent=gene-C9E95_RS10235;Dbxref=GenBank:WP_000093338.1;Name=WP_000093338.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006777639.1;locus_tag=C9E95_RS10235;product=CaiF/GrlA family transcriptional regulator;protein_id=WP_000093338.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 6069 6827 . + . ID=gene-C9E95_RS10240;Name=C9E95_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10240;old_locus_tag=C9E95_10490 NZ_PYJW01000095.1 Protein Homology CDS 6069 6827 . + 0 ID=cds-WP_000134802.1;Parent=gene-C9E95_RS10240;Dbxref=GenBank:WP_000134802.1;Name=WP_000134802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461942.1;locus_tag=C9E95_RS10240;product=transcriptional regulator;protein_id=WP_000134802.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 7037 7927 . - . ID=gene-C9E95_RS10245;Name=C9E95_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10245;old_locus_tag=C9E95_10495 NZ_PYJW01000095.1 Protein Homology CDS 7037 7927 . - 0 ID=cds-WP_131040915.1;Parent=gene-C9E95_RS10245;Dbxref=GenBank:WP_131040915.1;Name=WP_131040915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461941.1;locus_tag=C9E95_RS10245;product=nickel/cobalt efflux protein RcnA;protein_id=WP_131040915.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 8050 8322 . + . ID=gene-C9E95_RS10250;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=C9E95_RS10250;old_locus_tag=C9E95_10500 NZ_PYJW01000095.1 Protein Homology CDS 8050 8322 . + 0 ID=cds-WP_000019953.1;Parent=gene-C9E95_RS10250;Dbxref=GenBank:WP_000019953.1;Name=WP_000019953.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461940.1;locus_tag=C9E95_RS10250;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=WP_000019953.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 8353 9582 . - . ID=gene-C9E95_RS10255;Name=C9E95_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10255;old_locus_tag=C9E95_10505 NZ_PYJW01000095.1 Protein Homology CDS 8353 9582 . - 0 ID=cds-WP_000036837.1;Parent=gene-C9E95_RS10255;Dbxref=GenBank:WP_000036837.1;Name=WP_000036837.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461939.1;locus_tag=C9E95_RS10255;product=amino acid permease;protein_id=WP_000036837.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 9724 10179 . - . ID=gene-C9E95_RS10260;Name=C9E95_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10260;old_locus_tag=C9E95_10510 NZ_PYJW01000095.1 Protein Homology CDS 9724 10179 . - 0 ID=cds-WP_047606495.1;Parent=gene-C9E95_RS10260;Dbxref=GenBank:WP_047606495.1;Name=WP_047606495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465480.1;locus_tag=C9E95_RS10260;product=multidrug/biocide efflux PACE transporter;protein_id=WP_047606495.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 10283 11146 . + . ID=gene-C9E95_RS10265;Name=C9E95_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10265;old_locus_tag=C9E95_10515 NZ_PYJW01000095.1 Protein Homology CDS 10283 11146 . + 0 ID=cds-WP_001270769.1;Parent=gene-C9E95_RS10265;Dbxref=GenBank:WP_001270769.1;Name=WP_001270769.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461937.1;locus_tag=C9E95_RS10265;product=LysR family transcriptional regulator;protein_id=WP_001270769.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 11269 12447 . + . ID=gene-C9E95_RS10270;Name=C9E95_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10270;old_locus_tag=C9E95_10520 NZ_PYJW01000095.1 Protein Homology CDS 11269 12447 . + 0 ID=cds-WP_000665980.1;Parent=gene-C9E95_RS10270;Dbxref=GenBank:WP_000665980.1;Name=WP_000665980.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461936.1;locus_tag=C9E95_RS10270;product=acetyl-CoA C-acetyltransferase;protein_id=WP_000665980.1;transl_table=11 NZ_PYJW01000095.1 RefSeq pseudogene 12877 13712 . + . ID=gene-C9E95_RS10280;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=pseudogene;locus_tag=C9E95_RS10280;old_locus_tag=C9E95_10530;pseudo=true NZ_PYJW01000095.1 Protein Homology CDS 12877 13712 . + 0 ID=cds-C9E95_RS10280;Parent=gene-C9E95_RS10280;Note=frameshifted;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461935.1;locus_tag=C9E95_RS10280;product=5-dehydro-4-deoxy-D-glucuronate isomerase;pseudo=true;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 13769 14530 . + . ID=gene-C9E95_RS10285;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=C9E95_RS10285;old_locus_tag=C9E95_10535 NZ_PYJW01000095.1 Protein Homology CDS 13769 14530 . + 0 ID=cds-WP_080219635.1;Parent=gene-C9E95_RS10285;Dbxref=GenBank:WP_080219635.1;Name=WP_080219635.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461934.1;locus_tag=C9E95_RS10285;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_080219635.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 14884 16302 . + . ID=gene-C9E95_RS10290;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=C9E95_RS10290;old_locus_tag=C9E95_10540 NZ_PYJW01000095.1 Protein Homology CDS 14884 16302 . + 0 ID=cds-WP_000253650.1;Parent=gene-C9E95_RS10290;Dbxref=GenBank:WP_000253650.1;Name=WP_000253650.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461933.1;locus_tag=C9E95_RS10290;product=arabinose-proton symporter AraE;protein_id=WP_000253650.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 16415 17122 . + . ID=gene-C9E95_RS10295;Name=C9E95_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10295;old_locus_tag=C9E95_10545 NZ_PYJW01000095.1 Protein Homology CDS 16415 17122 . + 0 ID=cds-WP_000848631.1;Parent=gene-C9E95_RS10295;Dbxref=GenBank:WP_000848631.1;Name=WP_000848631.1;Ontology_term=GO:0008152,GO:0016855;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461932.1;locus_tag=C9E95_RS10295;product=aspartate/glutamate racemase;protein_id=WP_000848631.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 17094 18029 . - . ID=gene-C9E95_RS10300;Name=C9E95_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10300;old_locus_tag=C9E95_10550 NZ_PYJW01000095.1 Protein Homology CDS 17094 18029 . - 0 ID=cds-WP_000741798.1;Parent=gene-C9E95_RS10300;Dbxref=GenBank:WP_000741798.1;Name=WP_000741798.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461931.1;locus_tag=C9E95_RS10300;product=LysR family transcriptional regulator;protein_id=WP_000741798.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 18147 19409 . + . ID=gene-C9E95_RS10305;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=C9E95_RS10305;old_locus_tag=C9E95_10555 NZ_PYJW01000095.1 Protein Homology CDS 18147 19409 . + 0 ID=cds-WP_080219634.1;Parent=gene-C9E95_RS10305;Dbxref=GenBank:WP_080219634.1;Name=WP_080219634.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461930.1;locus_tag=C9E95_RS10305;product=diaminopimelate decarboxylase;protein_id=WP_080219634.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 19419 20441 . - . ID=gene-C9E95_RS10310;Name=C9E95_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10310;old_locus_tag=C9E95_10560 NZ_PYJW01000095.1 Protein Homology CDS 19419 20441 . - 0 ID=cds-WP_079788052.1;Parent=gene-C9E95_RS10310;Dbxref=GenBank:WP_079788052.1;Name=WP_079788052.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000968342.1;locus_tag=C9E95_RS10310;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_079788052.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 20452 21480 . - . ID=gene-C9E95_RS10315;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=C9E95_RS10315;old_locus_tag=C9E95_10565 NZ_PYJW01000095.1 Protein Homology CDS 20452 21480 . - 0 ID=cds-WP_000201028.1;Parent=gene-C9E95_RS10315;Dbxref=GenBank:WP_000201028.1;Name=WP_000201028.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461928.1;locus_tag=C9E95_RS10315;product=HTH-type transcriptional regulator GalR;protein_id=WP_000201028.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 22063 24222 . + . ID=gene-C9E95_RS10330;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=C9E95_RS10330;old_locus_tag=C9E95_10580 NZ_PYJW01000095.1 Protein Homology CDS 22063 24222 . + 0 ID=cds-WP_023204006.1;Parent=gene-C9E95_RS10330;Dbxref=GenBank:WP_023204006.1;Name=WP_023204006.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461927.1;locus_tag=C9E95_RS10330;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_023204006.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 24215 25417 . + . ID=gene-C9E95_RS10335;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=C9E95_RS10335;old_locus_tag=C9E95_10585 NZ_PYJW01000095.1 Protein Homology CDS 24215 25417 . + 0 ID=cds-WP_000004686.1;Parent=gene-C9E95_RS10335;Dbxref=GenBank:WP_000004686.1;Name=WP_000004686.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461926.1;locus_tag=C9E95_RS10335;product=lysophospholipid transporter LplT;protein_id=WP_000004686.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 25504 26544 . - . ID=gene-C9E95_RS10340;Name=C9E95_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10340;old_locus_tag=C9E95_10590 NZ_PYJW01000095.1 Protein Homology CDS 25504 26544 . - 0 ID=cds-WP_000558960.1;Parent=gene-C9E95_RS10340;Dbxref=GenBank:WP_000558960.1;Name=WP_000558960.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461925.1;locus_tag=C9E95_RS10340;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_000558960.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 26735 26953 . - . ID=gene-C9E95_RS10345;Name=C9E95_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10345;old_locus_tag=C9E95_10595 NZ_PYJW01000095.1 Protein Homology CDS 26735 26953 . - 0 ID=cds-WP_000758662.1;Parent=gene-C9E95_RS10345;Dbxref=GenBank:WP_000758662.1;Name=WP_000758662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461924.1;locus_tag=C9E95_RS10345;product=YgdI/YgdR family lipoprotein;protein_id=WP_000758662.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 27123 27836 . - . ID=gene-C9E95_RS10350;Name=C9E95_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10350;old_locus_tag=C9E95_10600 NZ_PYJW01000095.1 Protein Homology CDS 27123 27836 . - 0 ID=cds-WP_000895635.1;Parent=gene-C9E95_RS10350;Dbxref=GenBank:WP_000895635.1;Name=WP_000895635.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461923.1;locus_tag=C9E95_RS10350;product=TerC family protein;protein_id=WP_000895635.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 28018 28713 . - . ID=gene-C9E95_RS10355;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=C9E95_RS10355;old_locus_tag=C9E95_10605 NZ_PYJW01000095.1 Protein Homology CDS 28018 28713 . - 0 ID=cds-WP_001274930.1;Parent=gene-C9E95_RS10355;Dbxref=GenBank:WP_001274930.1;Name=WP_001274930.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461922.1;locus_tag=C9E95_RS10355;product=DNA mismatch repair endonuclease MutH;protein_id=WP_001274930.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 29396 29926 . + . ID=gene-C9E95_RS10360;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=C9E95_RS10360;old_locus_tag=C9E95_10610 NZ_PYJW01000095.1 Protein Homology CDS 29396 29926 . + 0 ID=cds-WP_000564481.1;Parent=gene-C9E95_RS10360;Dbxref=GenBank:WP_000564481.1;Name=WP_000564481.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=C9E95_RS10360;product=RNA pyrophosphohydrolase;protein_id=WP_000564481.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 29939 32185 . + . ID=gene-C9E95_RS10365;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=C9E95_RS10365;old_locus_tag=C9E95_10615 NZ_PYJW01000095.1 Protein Homology CDS 29939 32185 . + 0 ID=cds-WP_000957888.1;Parent=gene-C9E95_RS10365;Dbxref=GenBank:WP_000957888.1;Name=WP_000957888.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461920.1;locus_tag=C9E95_RS10365;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000957888.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 32401 33276 . + . ID=gene-C9E95_RS10370;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=C9E95_RS10370;old_locus_tag=C9E95_10620 NZ_PYJW01000095.1 Protein Homology CDS 32401 33276 . + 0 ID=cds-WP_000204645.1;Parent=gene-C9E95_RS10370;Dbxref=GenBank:WP_000204645.1;Name=WP_000204645.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461919.1;locus_tag=C9E95_RS10370;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204645.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 33283 34077 . + . ID=gene-C9E95_RS10375;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=C9E95_RS10375;old_locus_tag=C9E95_10625 NZ_PYJW01000095.1 Protein Homology CDS 33283 34077 . + 0 ID=cds-WP_000816247.1;Parent=gene-C9E95_RS10375;Dbxref=GenBank:WP_000816247.1;Name=WP_000816247.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=C9E95_RS10375;product=thymidylate synthase;protein_id=WP_000816247.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 34262 34732 . + . ID=gene-C9E95_RS10385;Name=C9E95_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10385;old_locus_tag=C9E95_10635 NZ_PYJW01000095.1 Protein Homology CDS 34262 34732 . + 0 ID=cds-WP_000744668.1;Parent=gene-C9E95_RS10385;Dbxref=GenBank:WP_000744668.1;Name=WP_000744668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077605.1;locus_tag=C9E95_RS10385;product=prepilin peptidase-dependent protein;protein_id=WP_000744668.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 34723 35286 . + . ID=gene-C9E95_RS10390;Name=C9E95_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10390;old_locus_tag=C9E95_10640 NZ_PYJW01000095.1 Protein Homology CDS 34723 35286 . + 0 ID=cds-WP_000029149.1;Parent=gene-C9E95_RS10390;Dbxref=GenBank:WP_000029149.1;Name=WP_000029149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461916.1;locus_tag=C9E95_RS10390;product=prepilin peptidase-dependent protein;protein_id=WP_000029149.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 35283 35690 . + . ID=gene-C9E95_RS10395;Name=C9E95_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10395;old_locus_tag=C9E95_10645 NZ_PYJW01000095.1 Protein Homology CDS 35283 35690 . + 0 ID=cds-WP_001078530.1;Parent=gene-C9E95_RS10395;Dbxref=GenBank:WP_001078530.1;Name=WP_001078530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461915.1;locus_tag=C9E95_RS10395;product=DUF2509 family protein;protein_id=WP_001078530.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 35675 35995 . + . ID=gene-C9E95_RS10400;Name=C9E95_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10400;old_locus_tag=C9E95_10650 NZ_PYJW01000095.1 Protein Homology CDS 35675 35995 . + 0 ID=cds-WP_000019290.1;Parent=gene-C9E95_RS10400;Dbxref=GenBank:WP_000019290.1;Name=WP_000019290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461914.1;locus_tag=C9E95_RS10400;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_000019290.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 36011 39382 . + . ID=gene-C9E95_RS10405;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=C9E95_RS10405;old_locus_tag=C9E95_10655 NZ_PYJW01000095.1 Protein Homology CDS 36011 39382 . + 0 ID=cds-WP_000946832.1;Parent=gene-C9E95_RS10405;Dbxref=GenBank:WP_000946832.1;Name=WP_000946832.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461913.2;locus_tag=C9E95_RS10405;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_000946832.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 39560 42448 . + . ID=gene-C9E95_RS10410;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=C9E95_RS10410;old_locus_tag=C9E95_10660 NZ_PYJW01000095.1 Protein Homology CDS 39560 42448 . + 0 ID=cds-WP_080219632.1;Parent=gene-C9E95_RS10410;Dbxref=GenBank:WP_080219632.1;Name=WP_080219632.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461912.1;locus_tag=C9E95_RS10410;product=pitrilysin;protein_id=WP_080219632.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 42441 45986 . + . ID=gene-C9E95_RS10415;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=C9E95_RS10415;old_locus_tag=C9E95_10665 NZ_PYJW01000095.1 Protein Homology CDS 42441 45986 . + 0 ID=cds-WP_079943187.1;Parent=gene-C9E95_RS10415;Dbxref=GenBank:WP_079943187.1;Name=WP_079943187.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461911.1;locus_tag=C9E95_RS10415;product=exodeoxyribonuclease V subunit beta;protein_id=WP_079943187.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 45983 47818 . + . ID=gene-C9E95_RS10420;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=C9E95_RS10420;old_locus_tag=C9E95_10670 NZ_PYJW01000095.1 Protein Homology CDS 45983 47818 . + 0 ID=cds-WP_023993969.1;Parent=gene-C9E95_RS10420;Dbxref=GenBank:WP_023993969.1;Name=WP_023993969.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461910.1;locus_tag=C9E95_RS10420;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_023993969.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 47921 49252 . - . ID=gene-C9E95_RS10425;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=C9E95_RS10425;old_locus_tag=C9E95_10675 NZ_PYJW01000095.1 Protein Homology CDS 47921 49252 . - 0 ID=cds-WP_000588964.1;Parent=gene-C9E95_RS10425;Dbxref=GenBank:WP_000588964.1;Name=WP_000588964.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461909.1;locus_tag=C9E95_RS10425;product=amino-acid N-acetyltransferase;protein_id=WP_000588964.1;transl_table=11 NZ_PYJW01000095.1 RefSeq gene 49485 50738 . + . ID=gene-C9E95_RS10430;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=C9E95_RS10430;old_locus_tag=C9E95_10680 NZ_PYJW01000095.1 Protein Homology CDS 49485 50738 . + 0 ID=cds-WP_000011919.1;Parent=gene-C9E95_RS10430;Dbxref=GenBank:WP_000011919.1;Name=WP_000011919.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461908.1;locus_tag=C9E95_RS10430;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_000011919.1;transl_table=11 ##sequence-region NZ_PYJW01000098.1 1 50149 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000098.1 RefSeq region 1 50149 . + . ID=NZ_PYJW01000098.1:1..50149;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000098.1 RefSeq gene 251 1273 . - . ID=gene-C9E95_RS10655;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=C9E95_RS10655;old_locus_tag=C9E95_10910 NZ_PYJW01000098.1 Protein Homology CDS 251 1273 . - 0 ID=cds-WP_000628631.1;Parent=gene-C9E95_RS10655;Dbxref=GenBank:WP_000628631.1;Name=WP_000628631.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461136.1;locus_tag=C9E95_RS10655;product=HTH-type transcriptional regulator GalS;protein_id=WP_000628631.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 1423 2565 . - . ID=gene-C9E95_RS10660;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=C9E95_RS10660;old_locus_tag=C9E95_10915 NZ_PYJW01000098.1 Protein Homology CDS 1423 2565 . - 0 ID=cds-WP_001518079.1;Parent=gene-C9E95_RS10660;Dbxref=GenBank:WP_001518079.1;Name=WP_001518079.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461137.1;locus_tag=C9E95_RS10660;product=DUF418 domain-containing protein YeiB;protein_id=WP_001518079.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 2580 3248 . - . ID=gene-C9E95_RS10665;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=C9E95_RS10665;old_locus_tag=C9E95_10920 NZ_PYJW01000098.1 Protein Homology CDS 2580 3248 . - 0 ID=cds-WP_001139611.1;Parent=gene-C9E95_RS10665;Dbxref=GenBank:WP_001139611.1;Name=WP_001139611.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461138.1;locus_tag=C9E95_RS10665;product=GTP cyclohydrolase I FolE;protein_id=WP_001139611.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 3578 4435 . + . ID=gene-C9E95_RS10670;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=C9E95_RS10670;old_locus_tag=C9E95_10930 NZ_PYJW01000098.1 Protein Homology CDS 3578 4435 . + 0 ID=cds-WP_000425490.1;Parent=gene-C9E95_RS10670;Dbxref=GenBank:WP_000425490.1;Name=WP_000425490.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461139.2;locus_tag=C9E95_RS10670;product=S-formylglutathione hydrolase;protein_id=WP_000425490.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 4424 4813 . - . ID=gene-C9E95_RS10675;Name=C9E95_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10675;old_locus_tag=C9E95_10935 NZ_PYJW01000098.1 Protein Homology CDS 4424 4813 . - 0 ID=cds-WP_000876817.1;Parent=gene-C9E95_RS10675;Dbxref=GenBank:WP_000876817.1;Name=WP_000876817.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461140.1;locus_tag=C9E95_RS10675;product=helix-turn-helix domain-containing protein;protein_id=WP_000876817.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 4818 6185 . - . ID=gene-C9E95_RS10680;Name=C9E95_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10680;old_locus_tag=C9E95_10940 NZ_PYJW01000098.1 Protein Homology CDS 4818 6185 . - 0 ID=cds-WP_000443206.1;Parent=gene-C9E95_RS10680;Dbxref=GenBank:WP_000443206.1;Name=WP_000443206.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461141.1;locus_tag=C9E95_RS10680;product=L-serine ammonia-lyase;protein_id=WP_000443206.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 6402 7289 . + . ID=gene-C9E95_RS10685;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=C9E95_RS10685;old_locus_tag=C9E95_10945 NZ_PYJW01000098.1 Protein Homology CDS 6402 7289 . + 0 ID=cds-WP_000022908.1;Parent=gene-C9E95_RS10685;Dbxref=GenBank:WP_000022908.1;Name=WP_000022908.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461142.1;locus_tag=C9E95_RS10685;product=phosphoserine phosphatase SerB;protein_id=WP_000022908.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 7322 8644 . + . ID=gene-C9E95_RS10690;Name=C9E95_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10690;old_locus_tag=C9E95_10950 NZ_PYJW01000098.1 Protein Homology CDS 7322 8644 . + 0 ID=cds-WP_000023806.1;Parent=gene-C9E95_RS10690;Dbxref=GenBank:WP_000023806.1;Name=WP_000023806.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461143.1;locus_tag=C9E95_RS10690;product=MFS transporter;protein_id=WP_000023806.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 8688 10679 . - . ID=gene-C9E95_RS10695;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=C9E95_RS10695;old_locus_tag=C9E95_10955 NZ_PYJW01000098.1 Protein Homology CDS 8688 10679 . - 0 ID=cds-WP_000488252.1;Parent=gene-C9E95_RS10695;Dbxref=GenBank:WP_000488252.1;Name=WP_000488252.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461144.1;locus_tag=C9E95_RS10695;product=catecholate siderophore receptor CirA;protein_id=WP_000488252.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 11025 12494 . - . ID=gene-C9E95_RS10705;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=C9E95_RS10705;old_locus_tag=C9E95_10965 NZ_PYJW01000098.1 Protein Homology CDS 11025 12494 . - 0 ID=cds-WP_000535000.1;Parent=gene-C9E95_RS10705;Dbxref=GenBank:WP_000535000.1;Name=WP_000535000.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461145.1;locus_tag=C9E95_RS10705;product=lysine-specific permease;protein_id=WP_000535000.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 12684 13547 . - . ID=gene-C9E95_RS10710;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=C9E95_RS10710;old_locus_tag=C9E95_10970 NZ_PYJW01000098.1 Protein Homology CDS 12684 13547 . - 0 ID=cds-WP_000548316.1;Parent=gene-C9E95_RS10710;Dbxref=GenBank:WP_000548316.1;Name=WP_000548316.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461146.1;locus_tag=C9E95_RS10710;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_000548316.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 13668 14717 . + . ID=gene-C9E95_RS10715;Name=C9E95_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10715;old_locus_tag=C9E95_10975 NZ_PYJW01000098.1 Protein Homology CDS 13668 14717 . + 0 ID=cds-WP_000137961.1;Parent=gene-C9E95_RS10715;Dbxref=GenBank:WP_000137961.1;Name=WP_000137961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461147.1;locus_tag=C9E95_RS10715;product=YeiH family protein;protein_id=WP_000137961.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 14796 15653 . + . ID=gene-C9E95_RS10720;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=C9E95_RS10720;old_locus_tag=C9E95_10980 NZ_PYJW01000098.1 Protein Homology CDS 14796 15653 . + 0 ID=cds-WP_000873906.1;Parent=gene-C9E95_RS10720;Dbxref=GenBank:WP_000873906.1;Name=WP_000873906.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461148.1;locus_tag=C9E95_RS10720;product=deoxyribonuclease IV;protein_id=WP_000873906.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 15718 17406 . - . ID=gene-C9E95_RS10725;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=C9E95_RS10725;old_locus_tag=C9E95_10985 NZ_PYJW01000098.1 Protein Homology CDS 15718 17406 . - 0 ID=cds-WP_000854408.1;Parent=gene-C9E95_RS10725;Dbxref=GenBank:WP_000854408.1;Name=WP_000854408.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461149.1;locus_tag=C9E95_RS10725;product=PTS fructose transporter subunit IIBC;protein_id=WP_000854408.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 17423 18361 . - . ID=gene-C9E95_RS10730;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=C9E95_RS10730;old_locus_tag=C9E95_10990 NZ_PYJW01000098.1 Protein Homology CDS 17423 18361 . - 0 ID=cds-WP_000091249.1;Parent=gene-C9E95_RS10730;Dbxref=GenBank:WP_000091249.1;Name=WP_000091249.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461150.1;locus_tag=C9E95_RS10730;product=1-phosphofructokinase;protein_id=WP_000091249.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 18361 19491 . - . ID=gene-C9E95_RS10735;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=C9E95_RS10735;old_locus_tag=C9E95_10995 NZ_PYJW01000098.1 Protein Homology CDS 18361 19491 . - 0 ID=cds-WP_000487287.1;Parent=gene-C9E95_RS10735;Dbxref=GenBank:WP_000487287.1;Name=WP_000487287.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461151.1;locus_tag=C9E95_RS10735;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_000487287.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 19860 21041 . + . ID=gene-C9E95_RS10740;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=C9E95_RS10740;old_locus_tag=C9E95_11000 NZ_PYJW01000098.1 Protein Homology CDS 19860 21041 . + 0 ID=cds-WP_000551934.1;Parent=gene-C9E95_RS10740;Dbxref=GenBank:WP_000551934.1;Name=WP_000551934.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461152.1;locus_tag=C9E95_RS10740;product=sugar efflux transporter SetB;protein_id=WP_000551934.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 21106 21771 . - . ID=gene-C9E95_RS10745;Name=C9E95_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10745;old_locus_tag=C9E95_11005 NZ_PYJW01000098.1 Protein Homology CDS 21106 21771 . - 0 ID=cds-WP_080203705.1;Parent=gene-C9E95_RS10745;Dbxref=GenBank:WP_080203705.1;Name=WP_080203705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461153.1;locus_tag=C9E95_RS10745;product=GNVR domain-containing protein;protein_id=WP_080203705.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 21773 21895 . - . ID=gene-C9E95_RS10750;Name=C9E95_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10750;old_locus_tag=C9E95_11010 NZ_PYJW01000098.1 Protein Homology CDS 21773 21895 . - 0 ID=cds-WP_001519564.1;Parent=gene-C9E95_RS10750;Dbxref=GenBank:WP_001519564.1;Name=WP_001519564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461154.1;locus_tag=C9E95_RS10750;product=membrane protein;protein_id=WP_001519564.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 22283 22537 . - . ID=gene-C9E95_RS10755;Name=C9E95_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10755;old_locus_tag=C9E95_11015 NZ_PYJW01000098.1 Protein Homology CDS 22283 22537 . - 0 ID=cds-WP_001523448.1;Parent=gene-C9E95_RS10755;Dbxref=GenBank:WP_001523448.1;Name=WP_001523448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675765.1;locus_tag=C9E95_RS10755;product=YkgJ family cysteine cluster protein;protein_id=WP_001523448.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 22861 23433 . + . ID=gene-C9E95_RS10760;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=C9E95_RS10760;old_locus_tag=C9E95_11020 NZ_PYJW01000098.1 Protein Homology CDS 22861 23433 . + 0 ID=cds-WP_001136822.1;Parent=gene-C9E95_RS10760;Dbxref=GenBank:WP_001136822.1;Name=WP_001136822.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=C9E95_RS10760;product=elongation factor P-like protein YeiP;protein_id=WP_001136822.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 23645 24631 . + . ID=gene-C9E95_RS10765;Name=C9E95_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10765;old_locus_tag=C9E95_11025 NZ_PYJW01000098.1 Protein Homology CDS 23645 24631 . + 0 ID=cds-WP_020899022.1;Parent=gene-C9E95_RS10765;Dbxref=GenBank:WP_020899022.1;Name=WP_020899022.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461156.1;locus_tag=C9E95_RS10765;product=CobW family GTP-binding protein;protein_id=WP_020899022.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 24661 25380 . + . ID=gene-C9E95_RS10770;Name=C9E95_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10770;old_locus_tag=C9E95_11030 NZ_PYJW01000098.1 Protein Homology CDS 24661 25380 . + 0 ID=cds-WP_000178091.1;Parent=gene-C9E95_RS10770;Dbxref=GenBank:WP_000178091.1;Name=WP_000178091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461157.1;locus_tag=C9E95_RS10770;product=phosphatase PAP2 family protein;protein_id=WP_000178091.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 25794 26366 . + . ID=gene-C9E95_RS10775;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=C9E95_RS10775;old_locus_tag=C9E95_11040 NZ_PYJW01000098.1 Protein Homology CDS 25794 26366 . + 0 ID=cds-WP_000241015.1;Parent=gene-C9E95_RS10775;Dbxref=GenBank:WP_000241015.1;Name=WP_000241015.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461158.1;locus_tag=C9E95_RS10775;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_000241015.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 26692 28248 . + . ID=gene-C9E95_RS10780;Name=C9E95_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10780;old_locus_tag=C9E95_11050 NZ_PYJW01000098.1 Protein Homology CDS 26692 28248 . + 0 ID=cds-WP_080203707.1;Parent=gene-C9E95_RS10780;Dbxref=GenBank:WP_080203707.1;Name=WP_080203707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461159.1;locus_tag=C9E95_RS10780;product=cyclic di-GMP phosphodiesterase;protein_id=WP_080203707.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 28355 30160 . + . ID=gene-C9E95_RS10785;Name=C9E95_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10785;old_locus_tag=C9E95_11055 NZ_PYJW01000098.1 Protein Homology CDS 28355 30160 . + 0 ID=cds-WP_000561742.1;Parent=gene-C9E95_RS10785;Dbxref=GenBank:WP_000561742.1;Name=WP_000561742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461160.1;locus_tag=C9E95_RS10785;product=extracellular solute-binding protein;protein_id=WP_000561742.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 30170 31264 . + . ID=gene-C9E95_RS10790;Name=C9E95_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10790;old_locus_tag=C9E95_11060 NZ_PYJW01000098.1 Protein Homology CDS 30170 31264 . + 0 ID=cds-WP_000501623.1;Parent=gene-C9E95_RS10790;Dbxref=GenBank:WP_000501623.1;Name=WP_000501623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461161.1;locus_tag=C9E95_RS10790;product=microcin C ABC transporter permease YejB;protein_id=WP_000501623.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 31264 32289 . + . ID=gene-C9E95_RS10795;Name=C9E95_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10795;old_locus_tag=C9E95_11065 NZ_PYJW01000098.1 Protein Homology CDS 31264 32289 . + 0 ID=cds-WP_001137761.1;Parent=gene-C9E95_RS10795;Dbxref=GenBank:WP_001137761.1;Name=WP_001137761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461162.1;locus_tag=C9E95_RS10795;product=ABC transporter permease;protein_id=WP_001137761.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 32291 33880 . + . ID=gene-C9E95_RS10800;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=C9E95_RS10800;old_locus_tag=C9E95_11070 NZ_PYJW01000098.1 Protein Homology CDS 32291 33880 . + 0 ID=cds-WP_023243077.1;Parent=gene-C9E95_RS10800;Dbxref=GenBank:WP_023243077.1;Name=WP_023243077.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461163.1;locus_tag=C9E95_RS10800;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_023243077.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 33884 34228 . - . ID=gene-C9E95_RS10805;Name=C9E95_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10805;old_locus_tag=C9E95_11075 NZ_PYJW01000098.1 Protein Homology CDS 33884 34228 . - 0 ID=cds-WP_001094639.1;Parent=gene-C9E95_RS10805;Dbxref=GenBank:WP_001094639.1;Name=WP_001094639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461164.1;locus_tag=C9E95_RS10805;product=YejG family protein;protein_id=WP_001094639.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 34619 35809 . - . ID=gene-C9E95_RS10810;Name=C9E95_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10810;old_locus_tag=C9E95_11085 NZ_PYJW01000098.1 Protein Homology CDS 34619 35809 . - 0 ID=cds-WP_000213349.1;Parent=gene-C9E95_RS10810;Dbxref=GenBank:WP_000213349.1;Name=WP_000213349.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461165.1;locus_tag=C9E95_RS10810;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_000213349.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 35837 36532 . - . ID=gene-C9E95_RS10815;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=C9E95_RS10815;old_locus_tag=C9E95_11090 NZ_PYJW01000098.1 Protein Homology CDS 35837 36532 . - 0 ID=cds-WP_001234836.1;Parent=gene-C9E95_RS10815;Dbxref=GenBank:WP_001234836.1;Name=WP_001234836.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461166.1;locus_tag=C9E95_RS10815;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_001234836.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 36684 38444 . + . ID=gene-C9E95_RS10820;Name=C9E95_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10820;old_locus_tag=C9E95_11095 NZ_PYJW01000098.1 Protein Homology CDS 36684 38444 . + 0 ID=cds-WP_080203708.1;Parent=gene-C9E95_RS10820;Dbxref=GenBank:WP_080203708.1;Name=WP_080203708.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461167.1;locus_tag=C9E95_RS10820;product=DEAD/DEAH box helicase;protein_id=WP_080203708.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 38569 38853 . + . ID=gene-C9E95_RS10825;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=C9E95_RS10825;old_locus_tag=C9E95_11100 NZ_PYJW01000098.1 Protein Homology CDS 38569 38853 . + 0 ID=cds-WP_000494192.1;Parent=gene-C9E95_RS10825;Dbxref=GenBank:WP_000494192.1;Name=WP_000494192.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=C9E95_RS10825;product=50S ribosomal protein L25;protein_id=WP_000494192.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 38962 39582 . - . ID=gene-C9E95_RS10830;Name=C9E95_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10830;old_locus_tag=C9E95_11105 NZ_PYJW01000098.1 Protein Homology CDS 38962 39582 . - 0 ID=cds-WP_080183616.1;Parent=gene-C9E95_RS10830;Dbxref=GenBank:WP_080183616.1;Name=WP_080183616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461169.1;locus_tag=C9E95_RS10830;product=hypothetical protein;protein_id=WP_080183616.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 39610 40617 . - . ID=gene-C9E95_RS10835;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=C9E95_RS10835;old_locus_tag=C9E95_11110 NZ_PYJW01000098.1 Protein Homology CDS 39610 40617 . - 0 ID=cds-WP_000050806.1;Parent=gene-C9E95_RS10835;Dbxref=GenBank:WP_000050806.1;Name=WP_000050806.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461170.1;locus_tag=C9E95_RS10835;product=nucleoid-associated protein YejK;protein_id=WP_000050806.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 40797 41024 . + . ID=gene-C9E95_RS10840;Name=C9E95_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10840;old_locus_tag=C9E95_11115 NZ_PYJW01000098.1 Protein Homology CDS 40797 41024 . + 0 ID=cds-WP_001135904.1;Parent=gene-C9E95_RS10840;Dbxref=GenBank:WP_001135904.1;Name=WP_001135904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461171.1;locus_tag=C9E95_RS10840;product=YejL family protein;protein_id=WP_001135904.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 41056 42816 . + . ID=gene-C9E95_RS10845;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=C9E95_RS10845;old_locus_tag=C9E95_11120 NZ_PYJW01000098.1 Protein Homology CDS 41056 42816 . + 0 ID=cds-WP_000256150.1;Parent=gene-C9E95_RS10845;Dbxref=GenBank:WP_000256150.1;Name=WP_000256150.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=C9E95_RS10845;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_000256150.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 42890 42966 . + . ID=gene-C9E95_RS10850;Name=C9E95_RS10850;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS10850;old_locus_tag=C9E95_11125 NZ_PYJW01000098.1 tRNAscan-SE tRNA 42890 42966 . + . ID=rna-C9E95_RS10850;Parent=gene-C9E95_RS10850;anticodon=(pos:42924..42926);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS10850;product=tRNA-Pro NZ_PYJW01000098.1 tRNAscan-SE exon 42890 42966 . + . ID=exon-C9E95_RS10850-1;Parent=rna-C9E95_RS10850;anticodon=(pos:42924..42926);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS10850;product=tRNA-Pro NZ_PYJW01000098.1 RefSeq pseudogene 43277 43499 . - . ID=gene-C9E95_RS10855;Name=C9E95_RS10855;end_range=43499,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS10855;old_locus_tag=C9E95_11130;partial=true;pseudo=true NZ_PYJW01000098.1 Protein Homology CDS 43277 43499 . - 0 ID=cds-C9E95_RS10855;Parent=gene-C9E95_RS10855;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=43499,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=C9E95_RS10855;partial=true;product=DUF4113 domain-containing protein;pseudo=true;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 43587 45953 . - . ID=gene-C9E95_RS10860;Name=sspH2;gbkey=Gene;gene=sspH2;gene_biotype=protein_coding;locus_tag=C9E95_RS10860;old_locus_tag=C9E95_11140 NZ_PYJW01000098.1 Protein Homology CDS 43587 45953 . - 0 ID=cds-WP_080203709.1;Parent=gene-C9E95_RS10860;Dbxref=GenBank:WP_080203709.1;Name=WP_080203709.1;gbkey=CDS;gene=sspH2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461184.1;locus_tag=C9E95_RS10860;product=SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2;protein_id=WP_080203709.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 46122 46325 . - . ID=gene-C9E95_RS10865;Name=C9E95_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10865;old_locus_tag=C9E95_11145 NZ_PYJW01000098.1 GeneMarkS-2+ CDS 46122 46325 . - 0 ID=cds-WP_031604253.1;Parent=gene-C9E95_RS10865;Dbxref=GenBank:WP_031604253.1;Name=WP_031604253.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS10865;product=tail protein;protein_id=WP_031604253.1;transl_table=11 NZ_PYJW01000098.1 RefSeq pseudogene 46951 47569 . - . ID=gene-C9E95_RS23735;Name=C9E95_RS23735;end_range=47569,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23735;partial=true;pseudo=true;start_range=.,46951 NZ_PYJW01000098.1 Protein Homology CDS 46951 47569 . - 0 ID=cds-C9E95_RS23735;Parent=gene-C9E95_RS23735;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=47569,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461524.1;locus_tag=C9E95_RS23735;partial=true;product=phage tail protein;pseudo=true;start_range=.,46951;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 47529 47687 . + . ID=gene-C9E95_RS23185;Name=C9E95_RS23185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23185 NZ_PYJW01000098.1 GeneMarkS-2+ CDS 47529 47687 . + 0 ID=cds-WP_000340080.1;Parent=gene-C9E95_RS23185;Dbxref=GenBank:WP_000340080.1;Name=WP_000340080.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS23185;product=hypothetical protein;protein_id=WP_000340080.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 47716 47919 . + . ID=gene-C9E95_RS10875;Name=C9E95_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10875;old_locus_tag=C9E95_11155 NZ_PYJW01000098.1 Protein Homology CDS 47716 47919 . + 0 ID=cds-WP_001653202.1;Parent=gene-C9E95_RS10875;Dbxref=GenBank:WP_001653202.1;Name=WP_001653202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461187.1;locus_tag=C9E95_RS10875;product=virulence protein MsgA;protein_id=WP_001653202.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 48111 48674 . - . ID=gene-C9E95_RS10880;Name=pagL;gbkey=Gene;gene=pagL;gene_biotype=protein_coding;locus_tag=C9E95_RS10880;old_locus_tag=C9E95_11160 NZ_PYJW01000098.1 Protein Homology CDS 48111 48674 . - 0 ID=cds-WP_000281877.1;Parent=gene-C9E95_RS10880;Dbxref=GenBank:WP_000281877.1;Name=WP_000281877.1;gbkey=CDS;gene=pagL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461188.1;locus_tag=C9E95_RS10880;product=lipid A 3-O-deacylase PagL;protein_id=WP_000281877.1;transl_table=11 NZ_PYJW01000098.1 RefSeq gene 49404 50051 . + . ID=gene-C9E95_RS10890;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=C9E95_RS10890;old_locus_tag=C9E95_11170 NZ_PYJW01000098.1 Protein Homology CDS 49404 50051 . + 0 ID=cds-WP_001115498.1;Parent=gene-C9E95_RS10890;Dbxref=GenBank:WP_001115498.1;Name=WP_001115498.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461189.1;locus_tag=C9E95_RS10890;product=nitrate/nitrite response regulator protein NarP;protein_id=WP_001115498.1;transl_table=11 ##sequence-region NZ_PYJW01000101.1 1 728 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000101.1 RefSeq region 1 728 . + . ID=NZ_PYJW01000101.1:1..728;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000101.1 RefSeq gene 1 728 . - . ID=gene-C9E95_RS10910;Name=C9E95_RS10910;end_range=728,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10910;old_locus_tag=C9E95_11190;partial=true;start_range=.,1 NZ_PYJW01000101.1 Protein Homology CDS 1 728 . - 0 ID=cds-WP_210115732.1;Parent=gene-C9E95_RS10910;Dbxref=GenBank:WP_210115732.1;Name=WP_210115732.1;end_range=728,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001529574.1;locus_tag=C9E95_RS10910;partial=true;product=RHS domain-containing protein;protein_id=WP_210115732.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJW01000030.1 1 709 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000030.1 RefSeq region 1 709 . + . ID=NZ_PYJW01000030.1:1..709;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000030.1 RefSeq pseudogene 96 709 . + . ID=gene-C9E95_RS01750;Name=C9E95_RS01750;end_range=709,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS01750;old_locus_tag=C9E95_01785;partial=true;pseudo=true NZ_PYJW01000030.1 Protein Homology CDS 96 709 . + 0 ID=cds-C9E95_RS01750;Parent=gene-C9E95_RS01750;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=709,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001259151.1;locus_tag=C9E95_RS01750;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_PYJW01000035.1 1 49759 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000035.1 RefSeq region 1 49759 . + . ID=NZ_PYJW01000035.1:1..49759;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000035.1 RefSeq gene 154 1485 . + . ID=gene-C9E95_RS02320;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=C9E95_RS02320;old_locus_tag=C9E95_02365 NZ_PYJW01000035.1 Protein Homology CDS 154 1485 . + 0 ID=cds-WP_000100008.1;Parent=gene-C9E95_RS02320;Dbxref=GenBank:WP_000100008.1;Name=WP_000100008.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461493.1;locus_tag=C9E95_RS02320;product=cadaverine/lysine antiporter;protein_id=WP_000100008.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 1568 3712 . + . ID=gene-C9E95_RS02325;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=C9E95_RS02325;old_locus_tag=C9E95_02370 NZ_PYJW01000035.1 Protein Homology CDS 1568 3712 . + 0 ID=cds-WP_001100652.1;Parent=gene-C9E95_RS02325;Dbxref=GenBank:WP_001100652.1;Name=WP_001100652.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461494.1;locus_tag=C9E95_RS02325;product=lysine decarboxylase CadA;protein_id=WP_001100652.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 3768 5228 . + . ID=gene-C9E95_RS02330;Name=C9E95_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02330;old_locus_tag=C9E95_02375 NZ_PYJW01000035.1 Protein Homology CDS 3768 5228 . + 0 ID=cds-WP_135369801.1;Parent=gene-C9E95_RS02330;Dbxref=GenBank:WP_135369801.1;Name=WP_135369801.1;Ontology_term=GO:0015833,GO:0015333,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptide:proton symporter activity|0015333||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461495.1;locus_tag=C9E95_RS02330;product=oligopeptide:H+ symporter;protein_id=WP_135369801.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 5277 5615 . - . ID=gene-C9E95_RS02335;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=C9E95_RS02335;old_locus_tag=C9E95_02380 NZ_PYJW01000035.1 Protein Homology CDS 5277 5615 . - 0 ID=cds-WP_000717694.1;Parent=gene-C9E95_RS02335;Dbxref=GenBank:WP_000717694.1;Name=WP_000717694.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=C9E95_RS02335;product=nitrogen regulatory protein P-II;protein_id=WP_000717694.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 5692 7026 . - . ID=gene-C9E95_RS02340;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=C9E95_RS02340;old_locus_tag=C9E95_02385 NZ_PYJW01000035.1 Protein Homology CDS 5692 7026 . - 0 ID=cds-WP_024131115.1;Parent=gene-C9E95_RS02340;Dbxref=GenBank:WP_024131115.1;Name=WP_024131115.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311447.1;locus_tag=C9E95_RS02340;product=two-component system response regulator GlrR;protein_id=WP_024131115.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 7026 7790 . - . ID=gene-C9E95_RS02345;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=C9E95_RS02345;old_locus_tag=C9E95_02390 NZ_PYJW01000035.1 Protein Homology CDS 7026 7790 . - 0 ID=cds-WP_001054234.1;Parent=gene-C9E95_RS02345;Dbxref=GenBank:WP_001054234.1;Name=WP_001054234.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461498.1;locus_tag=C9E95_RS02345;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_001054234.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 7792 9222 . - . ID=gene-C9E95_RS02350;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=C9E95_RS02350;old_locus_tag=C9E95_02395 NZ_PYJW01000035.1 Protein Homology CDS 7792 9222 . - 0 ID=cds-WP_001670672.1;Parent=gene-C9E95_RS02350;Dbxref=GenBank:WP_001670672.1;Name=WP_001670672.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001676035.1;locus_tag=C9E95_RS02350;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_001670672.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 9727 13614 . - . ID=gene-C9E95_RS02355;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=C9E95_RS02355;old_locus_tag=C9E95_02400 NZ_PYJW01000035.1 Protein Homology CDS 9727 13614 . - 0 ID=cds-WP_000970048.1;Parent=gene-C9E95_RS02355;Dbxref=GenBank:WP_000970048.1;Name=WP_000970048.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461500.1;locus_tag=C9E95_RS02355;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_000970048.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 13639 13869 . + . ID=gene-C9E95_RS02360;Name=C9E95_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02360;old_locus_tag=C9E95_02405 NZ_PYJW01000035.1 Protein Homology CDS 13639 13869 . + 0 ID=cds-WP_001667158.1;Parent=gene-C9E95_RS02360;Dbxref=GenBank:WP_001667158.1;Name=WP_001667158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669324.1;locus_tag=C9E95_RS02360;product=hypothetical protein;protein_id=WP_001667158.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 13870 15414 . + . ID=gene-C9E95_RS02365;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=C9E95_RS02365;old_locus_tag=C9E95_02410 NZ_PYJW01000035.1 Protein Homology CDS 13870 15414 . + 0 ID=cds-WP_001650370.1;Parent=gene-C9E95_RS02365;Dbxref=GenBank:WP_001650370.1;Name=WP_001650370.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=C9E95_RS02365;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_001650370.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 15465 16016 . - . ID=gene-C9E95_RS02370;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=C9E95_RS02370;old_locus_tag=C9E95_02415 NZ_PYJW01000035.1 Protein Homology CDS 15465 16016 . - 0 ID=cds-WP_001134563.1;Parent=gene-C9E95_RS02370;Dbxref=GenBank:WP_001134563.1;Name=WP_001134563.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461503.1;locus_tag=C9E95_RS02370;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_001134563.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 16041 16676 . - . ID=gene-C9E95_RS02375;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=C9E95_RS02375;old_locus_tag=C9E95_02420 NZ_PYJW01000035.1 Protein Homology CDS 16041 16676 . - 0 ID=cds-WP_000253558.1;Parent=gene-C9E95_RS02375;Dbxref=GenBank:WP_000253558.1;Name=WP_000253558.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=C9E95_RS02375;product=phosphatidylglycerophosphatase C;protein_id=WP_000253558.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 16680 18041 . - . ID=gene-C9E95_RS02380;Name=C9E95_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02380;old_locus_tag=C9E95_02425 NZ_PYJW01000035.1 Protein Homology CDS 16680 18041 . - 0 ID=cds-WP_000361660.1;Parent=gene-C9E95_RS02380;Dbxref=GenBank:WP_000361660.1;Name=WP_000361660.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461505.1;locus_tag=C9E95_RS02380;product=PTS transporter subunit EIIC;protein_id=WP_000361660.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 18052 18945 . - . ID=gene-C9E95_RS02385;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=C9E95_RS02385;old_locus_tag=C9E95_02430 NZ_PYJW01000035.1 Protein Homology CDS 18052 18945 . - 0 ID=cds-WP_001048530.1;Parent=gene-C9E95_RS02385;Dbxref=GenBank:WP_001048530.1;Name=WP_001048530.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461506.1;locus_tag=C9E95_RS02385;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_001048530.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 19061 19909 . + . ID=gene-C9E95_RS02390;Name=C9E95_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02390;old_locus_tag=C9E95_02435 NZ_PYJW01000035.1 Protein Homology CDS 19061 19909 . + 0 ID=cds-WP_023209427.1;Parent=gene-C9E95_RS02390;Dbxref=GenBank:WP_023209427.1;Name=WP_023209427.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461507.1;locus_tag=C9E95_RS02390;product=MurR/RpiR family transcriptional regulator;protein_id=WP_023209427.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 19948 20865 . - . ID=gene-C9E95_RS02395;Name=C9E95_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02395;old_locus_tag=C9E95_02440 NZ_PYJW01000035.1 Protein Homology CDS 19948 20865 . - 0 ID=cds-WP_000684023.1;Parent=gene-C9E95_RS02395;Dbxref=GenBank:WP_000684023.1;Name=WP_000684023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461508.1;locus_tag=C9E95_RS02395;product=oxidoreductase;protein_id=WP_000684023.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 20887 22083 . - . ID=gene-C9E95_RS02400;Name=C9E95_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02400;old_locus_tag=C9E95_02445 NZ_PYJW01000035.1 Protein Homology CDS 20887 22083 . - 0 ID=cds-WP_080203863.1;Parent=gene-C9E95_RS02400;Dbxref=GenBank:WP_080203863.1;Name=WP_080203863.1;Ontology_term=GO:0015129;gbkey=CDS;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461509.1;locus_tag=C9E95_RS02400;product=L-lactate MFS transporter;protein_id=WP_080203863.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 22199 23110 . + . ID=gene-C9E95_RS02405;Name=C9E95_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02405;old_locus_tag=C9E95_02450 NZ_PYJW01000035.1 Protein Homology CDS 22199 23110 . + 0 ID=cds-WP_001581956.1;Parent=gene-C9E95_RS02405;Dbxref=GenBank:WP_001581956.1;Name=WP_001581956.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001581956.1;locus_tag=C9E95_RS02405;product=LysR family transcriptional regulator;protein_id=WP_001581956.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 23163 23423 . + . ID=gene-C9E95_RS02410;Name=C9E95_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02410;old_locus_tag=C9E95_02455 NZ_PYJW01000035.1 Protein Homology CDS 23163 23423 . + 0 ID=cds-WP_001196291.1;Parent=gene-C9E95_RS02410;Dbxref=GenBank:WP_001196291.1;Name=WP_001196291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461511.1;locus_tag=C9E95_RS02410;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_001196291.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 23535 23915 . - . ID=gene-C9E95_RS02415;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=C9E95_RS02415;old_locus_tag=C9E95_02460 NZ_PYJW01000035.1 Protein Homology CDS 23535 23915 . - 0 ID=cds-WP_000986043.1;Parent=gene-C9E95_RS02415;Dbxref=GenBank:WP_000986043.1;Name=WP_000986043.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461512.1;locus_tag=C9E95_RS02415;product=holo-ACP synthase;protein_id=WP_000986043.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 23915 24646 . - . ID=gene-C9E95_RS02420;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=C9E95_RS02420;old_locus_tag=C9E95_02465 NZ_PYJW01000035.1 Protein Homology CDS 23915 24646 . - 0 ID=cds-WP_000818964.1;Parent=gene-C9E95_RS02420;Dbxref=GenBank:WP_000818964.1;Name=WP_000818964.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461513.1;locus_tag=C9E95_RS02420;product=pyridoxine 5'-phosphate synthase;protein_id=WP_000818964.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 24658 25386 . - . ID=gene-C9E95_RS02425;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=C9E95_RS02425;old_locus_tag=C9E95_02470 NZ_PYJW01000035.1 Protein Homology CDS 24658 25386 . - 0 ID=cds-WP_000399380.1;Parent=gene-C9E95_RS02425;Dbxref=GenBank:WP_000399380.1;Name=WP_000399380.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461514.1;locus_tag=C9E95_RS02425;product=DNA repair protein RecO;protein_id=WP_000399380.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 25398 26303 . - . ID=gene-C9E95_RS02430;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=C9E95_RS02430;old_locus_tag=C9E95_02475 NZ_PYJW01000035.1 Protein Homology CDS 25398 26303 . - 0 ID=cds-WP_000102230.1;Parent=gene-C9E95_RS02430;Dbxref=GenBank:WP_000102230.1;Name=WP_000102230.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461515.1;locus_tag=C9E95_RS02430;product=GTPase Era;protein_id=WP_000102230.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 26300 26980 . - . ID=gene-C9E95_RS02435;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=C9E95_RS02435;old_locus_tag=C9E95_02480 NZ_PYJW01000035.1 Protein Homology CDS 26300 26980 . - 0 ID=cds-WP_001068341.1;Parent=gene-C9E95_RS02435;Dbxref=GenBank:WP_001068341.1;Name=WP_001068341.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=C9E95_RS02435;product=ribonuclease III;protein_id=WP_001068341.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 27254 28228 . - . ID=gene-C9E95_RS02440;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=C9E95_RS02440;old_locus_tag=C9E95_02490 NZ_PYJW01000035.1 Protein Homology CDS 27254 28228 . - 0 ID=cds-WP_000002559.1;Parent=gene-C9E95_RS02440;Dbxref=GenBank:WP_000002559.1;Name=WP_000002559.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461517.1;locus_tag=C9E95_RS02440;product=signal peptidase I;protein_id=WP_000002559.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 28245 30044 . - . ID=gene-C9E95_RS02445;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=C9E95_RS02445;old_locus_tag=C9E95_02495 NZ_PYJW01000035.1 Protein Homology CDS 28245 30044 . - 0 ID=cds-WP_000790154.1;Parent=gene-C9E95_RS02445;Dbxref=GenBank:WP_000790154.1;Name=WP_000790154.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461518.1;locus_tag=C9E95_RS02445;product=translation elongation factor 4;protein_id=WP_000790154.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 30296 30775 . - . ID=gene-C9E95_RS02455;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=C9E95_RS02455;old_locus_tag=C9E95_02505 NZ_PYJW01000035.1 Protein Homology CDS 30296 30775 . - 0 ID=cds-WP_000589087.1;Parent=gene-C9E95_RS02455;Dbxref=GenBank:WP_000589087.1;Name=WP_000589087.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461572.1;locus_tag=C9E95_RS02455;product=SoxR-reducing system protein RseC;protein_id=WP_000589087.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 30772 31728 . - . ID=gene-C9E95_RS02460;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=C9E95_RS02460;old_locus_tag=C9E95_02510 NZ_PYJW01000035.1 Protein Homology CDS 30772 31728 . - 0 ID=cds-WP_000812017.1;Parent=gene-C9E95_RS02460;Dbxref=GenBank:WP_000812017.1;Name=WP_000812017.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461573.1;locus_tag=C9E95_RS02460;product=sigma-E factor regulatory protein RseB;protein_id=WP_000812017.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 31728 32378 . - . ID=gene-C9E95_RS02465;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=C9E95_RS02465;old_locus_tag=C9E95_02515 NZ_PYJW01000035.1 Protein Homology CDS 31728 32378 . - 0 ID=cds-WP_001168374.1;Parent=gene-C9E95_RS02465;Dbxref=GenBank:WP_001168374.1;Name=WP_001168374.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461574.1;locus_tag=C9E95_RS02465;product=anti-sigma-E factor RseA;protein_id=WP_001168374.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 32410 32985 . - . ID=gene-C9E95_RS02470;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=C9E95_RS02470;old_locus_tag=C9E95_02520 NZ_PYJW01000035.1 Protein Homology CDS 32410 32985 . - 0 ID=cds-WP_000003307.1;Parent=gene-C9E95_RS02470;Dbxref=GenBank:WP_000003307.1;Name=WP_000003307.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=C9E95_RS02470;product=RNA polymerase sigma factor RpoE;protein_id=WP_000003307.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 32982 33146 . - . ID=gene-C9E95_RS02475;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=C9E95_RS02475 NZ_PYJW01000035.1 Protein Homology CDS 32982 33146 . - 0 ID=cds-WP_014344135.1;Parent=gene-C9E95_RS02475;Dbxref=GenBank:WP_014344135.1;Name=WP_014344135.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344135.1;locus_tag=C9E95_RS02475;product=rpoE leader peptide RseD;protein_id=WP_014344135.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 33410 35032 . + . ID=gene-C9E95_RS02485;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=C9E95_RS02485;old_locus_tag=C9E95_02530 NZ_PYJW01000035.1 Protein Homology CDS 33410 35032 . + 0 ID=cds-WP_023993583.1;Parent=gene-C9E95_RS02485;Dbxref=GenBank:WP_023993583.1;Name=WP_023993583.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461576.1;locus_tag=C9E95_RS02485;product=L-aspartate oxidase;protein_id=WP_023993583.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 35017 35754 . - . ID=gene-C9E95_RS02490;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=C9E95_RS02490;old_locus_tag=C9E95_02535 NZ_PYJW01000035.1 Protein Homology CDS 35017 35754 . - 0 ID=cds-WP_023993582.1;Parent=gene-C9E95_RS02490;Dbxref=GenBank:WP_023993582.1;Name=WP_023993582.1;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461577.1;locus_tag=C9E95_RS02490;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_023993582.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 35885 37219 . + . ID=gene-C9E95_RS02495;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=C9E95_RS02495;old_locus_tag=C9E95_02540 NZ_PYJW01000035.1 Protein Homology CDS 35885 37219 . + 0 ID=cds-WP_000219174.1;Parent=gene-C9E95_RS02495;Dbxref=GenBank:WP_000219174.1;Name=WP_000219174.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461578.1;locus_tag=C9E95_RS02495;product=ATP-dependent RNA helicase SrmB;protein_id=WP_000219174.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 37237 38136 . - . ID=gene-C9E95_RS02500;Name=C9E95_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02500;old_locus_tag=C9E95_02545 NZ_PYJW01000035.1 Protein Homology CDS 37237 38136 . - 0 ID=cds-WP_001670786.1;Parent=gene-C9E95_RS02500;Dbxref=GenBank:WP_001670786.1;Name=WP_001670786.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461579.1;locus_tag=C9E95_RS02500;product=LysR family transcriptional regulator;protein_id=WP_001670786.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 38239 38826 . + . ID=gene-C9E95_RS02505;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=C9E95_RS02505;old_locus_tag=C9E95_02550 NZ_PYJW01000035.1 Protein Homology CDS 38239 38826 . + 0 ID=cds-WP_000188415.1;Parent=gene-C9E95_RS02505;Dbxref=GenBank:WP_000188415.1;Name=WP_000188415.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461580.1;locus_tag=C9E95_RS02505;product=cysteine/O-acetylserine transporter;protein_id=WP_000188415.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 38888 39271 . - . ID=gene-C9E95_RS02510;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=C9E95_RS02510;old_locus_tag=C9E95_02555 NZ_PYJW01000035.1 Protein Homology CDS 38888 39271 . - 0 ID=cds-WP_000627811.1;Parent=gene-C9E95_RS02510;Dbxref=GenBank:WP_000627811.1;Name=WP_000627811.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=C9E95_RS02510;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627811.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 39590 40279 . + . ID=gene-C9E95_RS02515;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=C9E95_RS02515;old_locus_tag=C9E95_02560 NZ_PYJW01000035.1 Protein Homology CDS 39590 40279 . + 0 ID=cds-WP_000179978.1;Parent=gene-C9E95_RS02515;Dbxref=GenBank:WP_000179978.1;Name=WP_000179978.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461582.1;locus_tag=C9E95_RS02515;product=uracil-DNA glycosylase;protein_id=WP_000179978.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 40395 41432 . - . ID=gene-C9E95_RS02520;Name=C9E95_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02520;old_locus_tag=C9E95_02565 NZ_PYJW01000035.1 Protein Homology CDS 40395 41432 . - 0 ID=cds-WP_000997368.1;Parent=gene-C9E95_RS02520;Dbxref=GenBank:WP_000997368.1;Name=WP_000997368.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461583.1;locus_tag=C9E95_RS02520;product=tRNA/rRNA methyltransferase;protein_id=WP_000997368.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 41636 42055 . + . ID=gene-C9E95_RS02525;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=C9E95_RS02525;old_locus_tag=C9E95_02570 NZ_PYJW01000035.1 Protein Homology CDS 41636 42055 . + 0 ID=cds-WP_001098732.1;Parent=gene-C9E95_RS02525;Dbxref=GenBank:WP_001098732.1;Name=WP_001098732.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461584.1;locus_tag=C9E95_RS02525;product=thioredoxin TrxC;protein_id=WP_001098732.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 42128 42808 . + . ID=gene-C9E95_RS02530;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=C9E95_RS02530;old_locus_tag=C9E95_02575 NZ_PYJW01000035.1 Protein Homology CDS 42128 42808 . + 0 ID=cds-WP_000183642.1;Parent=gene-C9E95_RS02530;Dbxref=GenBank:WP_000183642.1;Name=WP_000183642.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461585.1;locus_tag=C9E95_RS02530;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_000183642.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 42862 45522 . + . ID=gene-C9E95_RS02535;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=C9E95_RS02535;old_locus_tag=C9E95_02580 NZ_PYJW01000035.1 Protein Homology CDS 42862 45522 . + 0 ID=cds-WP_000082638.1;Parent=gene-C9E95_RS02535;Dbxref=GenBank:WP_000082638.1;Name=WP_000082638.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=C9E95_RS02535;product=protein lysine acetyltransferase;protein_id=WP_000082638.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 45637 46992 . + . ID=gene-C9E95_RS02540;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=C9E95_RS02540;old_locus_tag=C9E95_02585 NZ_PYJW01000035.1 Protein Homology CDS 45637 46992 . + 0 ID=cds-WP_000949286.1;Parent=gene-C9E95_RS02540;Dbxref=GenBank:WP_000949286.1;Name=WP_000949286.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=C9E95_RS02540;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_000949286.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 47037 47360 . + . ID=gene-C9E95_RS02545;Name=C9E95_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02545;old_locus_tag=C9E95_02590 NZ_PYJW01000035.1 Protein Homology CDS 47037 47360 . + 0 ID=cds-WP_001264473.1;Parent=gene-C9E95_RS02545;Dbxref=GenBank:WP_001264473.1;Name=WP_001264473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461588.1;locus_tag=C9E95_RS02545;product=YfiM family lipoprotein;protein_id=WP_001264473.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 47357 48658 . - . ID=gene-C9E95_RS02550;Name=C9E95_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02550;old_locus_tag=C9E95_02595 NZ_PYJW01000035.1 Protein Homology CDS 47357 48658 . - 0 ID=cds-WP_000807818.1;Parent=gene-C9E95_RS02550;Dbxref=GenBank:WP_000807818.1;Name=WP_000807818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461589.1;locus_tag=C9E95_RS02550;product=MFS transporter;protein_id=WP_000807818.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 48762 49217 . - . ID=gene-C9E95_RS02555;Name=C9E95_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02555;old_locus_tag=C9E95_02600 NZ_PYJW01000035.1 Protein Homology CDS 48762 49217 . - 0 ID=cds-WP_000985653.1;Parent=gene-C9E95_RS02555;Dbxref=GenBank:WP_000985653.1;Name=WP_000985653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461590.1;locus_tag=C9E95_RS02555;product=DUF4385 domain-containing protein;protein_id=WP_000985653.1;transl_table=11 NZ_PYJW01000035.1 RefSeq gene 49426 49541 . - . ID=gene-C9E95_RS02560;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9E95_RS02560;old_locus_tag=C9E95_02605 NZ_PYJW01000035.1 cmsearch rRNA 49426 49541 . - . ID=rna-C9E95_RS02560;Parent=gene-C9E95_RS02560;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS02560;product=5S ribosomal RNA NZ_PYJW01000035.1 cmsearch exon 49426 49541 . - . ID=exon-C9E95_RS02560-1;Parent=rna-C9E95_RS02560;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS02560;product=5S ribosomal RNA ##sequence-region NZ_PYJW01000053.1 1 696 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000053.1 RefSeq region 1 696 . + . ID=NZ_PYJW01000053.1:1..696;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000053.1 RefSeq pseudogene 1 160 . - . ID=gene-C9E95_RS23245;Name=C9E95_RS23245;end_range=160,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23245;partial=true;pseudo=true;start_range=.,1 NZ_PYJW01000053.1 Protein Homology CDS 1 160 . - 0 ID=cds-C9E95_RS23245;Parent=gene-C9E95_RS23245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=160,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461523.1;locus_tag=C9E95_RS23245;partial=true;product=macro domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_PYJW01000053.1 RefSeq pseudogene 152 376 . - . ID=gene-C9E95_RS23410;Name=C9E95_RS23410;end_range=376,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23410;old_locus_tag=C9E95_04280;partial=true;pseudo=true;start_range=.,152 NZ_PYJW01000053.1 Protein Homology CDS 152 376 . - 0 ID=cds-C9E95_RS23410;Parent=gene-C9E95_RS23410;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=376,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461524.1;locus_tag=C9E95_RS23410;partial=true;product=tail fiber protein;pseudo=true;start_range=.,152;transl_table=11 NZ_PYJW01000053.1 RefSeq pseudogene 369 629 . - . ID=gene-C9E95_RS04175;Name=C9E95_RS04175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS04175;old_locus_tag=C9E95_04285;partial=true;pseudo=true;start_range=.,369 NZ_PYJW01000053.1 Protein Homology CDS 369 629 . - 0 ID=cds-C9E95_RS04175;Parent=gene-C9E95_RS04175;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459886.1;locus_tag=C9E95_RS04175;partial=true;product=DUF1441 family protein;pseudo=true;start_range=.,369;transl_table=11 ##sequence-region NZ_PYJW01000168.1 1 49011 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000168.1 RefSeq region 1 49011 . + . ID=NZ_PYJW01000168.1:1..49011;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000168.1 RefSeq gene 78 1250 . - . ID=gene-C9E95_RS19645;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=C9E95_RS19645;old_locus_tag=C9E95_20125 NZ_PYJW01000168.1 Protein Homology CDS 78 1250 . - 0 ID=cds-WP_000673556.1;Parent=gene-C9E95_RS19645;Dbxref=GenBank:WP_000673556.1;Name=WP_000673556.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462212.1;locus_tag=C9E95_RS19645;product=Obg family GTPase CgtA;protein_id=WP_000673556.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 1266 2231 . - . ID=gene-C9E95_RS19650;Name=C9E95_RS19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19650;old_locus_tag=C9E95_20130 NZ_PYJW01000168.1 Protein Homology CDS 1266 2231 . - 0 ID=cds-WP_000813052.1;Parent=gene-C9E95_RS19650;Dbxref=GenBank:WP_000813052.1;Name=WP_000813052.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=C9E95_RS19650;product=DMT family transporter;protein_id=WP_000813052.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 2361 2618 . - . ID=gene-C9E95_RS19655;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=C9E95_RS19655;old_locus_tag=C9E95_20135 NZ_PYJW01000168.1 Protein Homology CDS 2361 2618 . - 0 ID=cds-WP_000940593.1;Parent=gene-C9E95_RS19655;Dbxref=GenBank:WP_000940593.1;Name=WP_000940593.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=C9E95_RS19655;product=50S ribosomal protein L27;protein_id=WP_000940593.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 2638 2949 . - . ID=gene-C9E95_RS19660;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=C9E95_RS19660;old_locus_tag=C9E95_20140 NZ_PYJW01000168.1 Protein Homology CDS 2638 2949 . - 0 ID=cds-WP_000271396.1;Parent=gene-C9E95_RS19660;Dbxref=GenBank:WP_000271396.1;Name=WP_000271396.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=C9E95_RS19660;product=50S ribosomal protein L21;protein_id=WP_000271396.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 3207 4178 . + . ID=gene-C9E95_RS19665;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=C9E95_RS19665;old_locus_tag=C9E95_20145 NZ_PYJW01000168.1 Protein Homology CDS 3207 4178 . + 0 ID=cds-WP_001047354.1;Parent=gene-C9E95_RS19665;Dbxref=GenBank:WP_001047354.1;Name=WP_001047354.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462215.1;locus_tag=C9E95_RS19665;product=octaprenyl diphosphate synthase;protein_id=WP_001047354.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 4410 4697 . + . ID=gene-C9E95_RS19670;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=C9E95_RS19670;old_locus_tag=C9E95_20150 NZ_PYJW01000168.1 Protein Homology CDS 4410 4697 . + 0 ID=cds-WP_000444168.1;Parent=gene-C9E95_RS19670;Dbxref=GenBank:WP_000444168.1;Name=WP_000444168.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462216.1;locus_tag=C9E95_RS19670;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_000444168.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 4755 6014 . - . ID=gene-C9E95_RS19675;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=C9E95_RS19675;old_locus_tag=C9E95_20155 NZ_PYJW01000168.1 Protein Homology CDS 4755 6014 . - 0 ID=cds-WP_000357288.1;Parent=gene-C9E95_RS19675;Dbxref=GenBank:WP_000357288.1;Name=WP_000357288.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462217.1;locus_tag=C9E95_RS19675;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357288.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 6068 6322 . - . ID=gene-C9E95_RS19680;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=C9E95_RS19680;old_locus_tag=C9E95_20160 NZ_PYJW01000168.1 Protein Homology CDS 6068 6322 . - 0 ID=cds-WP_001518349.1;Parent=gene-C9E95_RS19680;Dbxref=GenBank:WP_001518349.1;Name=WP_001518349.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=C9E95_RS19680;product=BolA family iron metabolism protein IbaG;protein_id=WP_001518349.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 6510 6806 . - . ID=gene-C9E95_RS19685;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=C9E95_RS19685;old_locus_tag=C9E95_20165 NZ_PYJW01000168.1 Protein Homology CDS 6510 6806 . - 0 ID=cds-WP_000188844.1;Parent=gene-C9E95_RS19685;Dbxref=GenBank:WP_000188844.1;Name=WP_000188844.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462219.1;locus_tag=C9E95_RS19685;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_000188844.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 6806 7441 . - . ID=gene-C9E95_RS19690;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=C9E95_RS19690;old_locus_tag=C9E95_20170 NZ_PYJW01000168.1 Protein Homology CDS 6806 7441 . - 0 ID=cds-WP_000476475.1;Parent=gene-C9E95_RS19690;Dbxref=GenBank:WP_000476475.1;Name=WP_000476475.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462220.1;locus_tag=C9E95_RS19690;product=phospholipid-binding protein MlaC;protein_id=WP_000476475.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 7460 8011 . - . ID=gene-C9E95_RS19695;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=C9E95_RS19695;old_locus_tag=C9E95_20175 NZ_PYJW01000168.1 Protein Homology CDS 7460 8011 . - 0 ID=cds-WP_001193591.1;Parent=gene-C9E95_RS19695;Dbxref=GenBank:WP_001193591.1;Name=WP_001193591.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462221.1;locus_tag=C9E95_RS19695;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_001193591.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 8016 8798 . - . ID=gene-C9E95_RS19700;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=C9E95_RS19700;old_locus_tag=C9E95_20180 NZ_PYJW01000168.1 Protein Homology CDS 8016 8798 . - 0 ID=cds-WP_000925786.1;Parent=gene-C9E95_RS19700;Dbxref=GenBank:WP_000925786.1;Name=WP_000925786.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=C9E95_RS19700;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_000925786.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 8806 9618 . - . ID=gene-C9E95_RS19705;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=C9E95_RS19705;old_locus_tag=C9E95_20185 NZ_PYJW01000168.1 Protein Homology CDS 8806 9618 . - 0 ID=cds-WP_000531566.1;Parent=gene-C9E95_RS19705;Dbxref=GenBank:WP_000531566.1;Name=WP_000531566.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462223.1;locus_tag=C9E95_RS19705;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_000531566.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 9831 10808 . + . ID=gene-C9E95_RS19710;Name=C9E95_RS19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19710;old_locus_tag=C9E95_20190 NZ_PYJW01000168.1 Protein Homology CDS 9831 10808 . + 0 ID=cds-WP_000922742.1;Parent=gene-C9E95_RS19710;Dbxref=GenBank:WP_000922742.1;Name=WP_000922742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462224.1;locus_tag=C9E95_RS19710;product=calcium/sodium antiporter;protein_id=WP_000922742.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 10822 11808 . + . ID=gene-C9E95_RS19715;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=C9E95_RS19715;old_locus_tag=C9E95_20195 NZ_PYJW01000168.1 Protein Homology CDS 10822 11808 . + 0 ID=cds-WP_000018617.1;Parent=gene-C9E95_RS19715;Dbxref=GenBank:WP_000018617.1;Name=WP_000018617.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462225.1;locus_tag=C9E95_RS19715;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_000018617.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 11829 12395 . + . ID=gene-C9E95_RS19720;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=C9E95_RS19720;old_locus_tag=C9E95_20200 NZ_PYJW01000168.1 Protein Homology CDS 11829 12395 . + 0 ID=cds-WP_000030029.1;Parent=gene-C9E95_RS19720;Dbxref=GenBank:WP_000030029.1;Name=WP_000030029.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462226.1;locus_tag=C9E95_RS19720;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_000030029.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 12392 12967 . + . ID=gene-C9E95_RS19725;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=C9E95_RS19725;old_locus_tag=C9E95_20205 NZ_PYJW01000168.1 Protein Homology CDS 12392 12967 . + 0 ID=cds-WP_000047845.1;Parent=gene-C9E95_RS19725;Dbxref=GenBank:WP_000047845.1;Name=WP_000047845.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462227.1;locus_tag=C9E95_RS19725;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000047845.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 12936 13490 . + . ID=gene-C9E95_RS19730;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=C9E95_RS19730;old_locus_tag=C9E95_20210 NZ_PYJW01000168.1 Protein Homology CDS 12936 13490 . + 0 ID=cds-WP_000669770.1;Parent=gene-C9E95_RS19730;Dbxref=GenBank:WP_000669770.1;Name=WP_000669770.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462228.1;locus_tag=C9E95_RS19730;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_000669770.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 13497 14222 . + . ID=gene-C9E95_RS19735;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=C9E95_RS19735;old_locus_tag=C9E95_20215 NZ_PYJW01000168.1 Protein Homology CDS 13497 14222 . + 0 ID=cds-WP_000224104.1;Parent=gene-C9E95_RS19735;Dbxref=GenBank:WP_000224104.1;Name=WP_000224104.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=C9E95_RS19735;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_000224104.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 14270 15703 . + . ID=gene-C9E95_RS19740;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=C9E95_RS19740;old_locus_tag=C9E95_20220 NZ_PYJW01000168.1 Protein Homology CDS 14270 15703 . + 0 ID=cds-WP_000809020.1;Parent=gene-C9E95_RS19740;Dbxref=GenBank:WP_000809020.1;Name=WP_000809020.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462230.1;locus_tag=C9E95_RS19740;product=RNA polymerase factor sigma-54;protein_id=WP_000809020.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 15726 16013 . + . ID=gene-C9E95_RS19745;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=C9E95_RS19745;old_locus_tag=C9E95_20225 NZ_PYJW01000168.1 Protein Homology CDS 15726 16013 . + 0 ID=cds-WP_001176589.1;Parent=gene-C9E95_RS19745;Dbxref=GenBank:WP_001176589.1;Name=WP_001176589.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462231.1;locus_tag=C9E95_RS19745;product=ribosome hibernation promoting factor;protein_id=WP_001176589.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 16131 16622 . + . ID=gene-C9E95_RS19750;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=C9E95_RS19750;old_locus_tag=C9E95_20230 NZ_PYJW01000168.1 Protein Homology CDS 16131 16622 . + 0 ID=cds-WP_000609332.1;Parent=gene-C9E95_RS19750;Dbxref=GenBank:WP_000609332.1;Name=WP_000609332.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462232.1;locus_tag=C9E95_RS19750;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_000609332.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 16668 17522 . + . ID=gene-C9E95_RS19755;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=C9E95_RS19755;old_locus_tag=C9E95_20235 NZ_PYJW01000168.1 Protein Homology CDS 16668 17522 . + 0 ID=cds-WP_000243749.1;Parent=gene-C9E95_RS19755;Dbxref=GenBank:WP_000243749.1;Name=WP_000243749.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462233.1;locus_tag=C9E95_RS19755;product=RNase adapter RapZ;protein_id=WP_000243749.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 17519 17791 . + . ID=gene-C9E95_RS19760;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=C9E95_RS19760;old_locus_tag=C9E95_20240 NZ_PYJW01000168.1 Protein Homology CDS 17519 17791 . + 0 ID=cds-WP_000216797.1;Parent=gene-C9E95_RS19760;Dbxref=GenBank:WP_000216797.1;Name=WP_000216797.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=C9E95_RS19760;product=PTS phosphocarrier protein NPr;protein_id=WP_000216797.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 18040 18672 . + . ID=gene-C9E95_RS19770;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=C9E95_RS19770;old_locus_tag=C9E95_20250 NZ_PYJW01000168.1 Protein Homology CDS 18040 18672 . + 0 ID=cds-WP_080204076.1;Parent=gene-C9E95_RS19770;Dbxref=GenBank:WP_080204076.1;Name=WP_080204076.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462235.1;locus_tag=C9E95_RS19770;product=PhoP regulatory network protein YrbL;protein_id=WP_080204076.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 18747 19475 . - . ID=gene-C9E95_RS19775;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=C9E95_RS19775;old_locus_tag=C9E95_20255 NZ_PYJW01000168.1 Protein Homology CDS 18747 19475 . - 0 ID=cds-WP_000044645.1;Parent=gene-C9E95_RS19775;Dbxref=GenBank:WP_000044645.1;Name=WP_000044645.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462236.1;locus_tag=C9E95_RS19775;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_000044645.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 19472 20125 . - . ID=gene-C9E95_RS19780;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=C9E95_RS19780;old_locus_tag=C9E95_20260 NZ_PYJW01000168.1 Protein Homology CDS 19472 20125 . - 0 ID=cds-WP_080204075.1;Parent=gene-C9E95_RS19780;Dbxref=GenBank:WP_080204075.1;Name=WP_080204075.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462237.1;locus_tag=C9E95_RS19780;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_080204075.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 20352 22688 . - . ID=gene-C9E95_RS19785;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=C9E95_RS19785;old_locus_tag=C9E95_20265 NZ_PYJW01000168.1 Protein Homology CDS 20352 22688 . - 0 ID=cds-WP_000809820.1;Parent=gene-C9E95_RS19785;Dbxref=GenBank:WP_000809820.1;Name=WP_000809820.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462238.1;locus_tag=C9E95_RS19785;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_000809820.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 22782 23711 . - . ID=gene-C9E95_RS19790;Name=C9E95_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19790;old_locus_tag=C9E95_20270 NZ_PYJW01000168.1 Protein Homology CDS 22782 23711 . - 0 ID=cds-WP_023994011.1;Parent=gene-C9E95_RS19790;Dbxref=GenBank:WP_023994011.1;Name=WP_023994011.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462239.1;locus_tag=C9E95_RS19790;product=TIGR01212 family radical SAM protein;protein_id=WP_023994011.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 24383 28843 . + . ID=gene-C9E95_RS19795;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=C9E95_RS19795;old_locus_tag=C9E95_20280 NZ_PYJW01000168.1 Protein Homology CDS 24383 28843 . + 0 ID=cds-WP_023165834.1;Parent=gene-C9E95_RS19795;Dbxref=GenBank:WP_023165834.1;Name=WP_023165834.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=C9E95_RS19795;product=glutamate synthase large subunit;protein_id=WP_023165834.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 28853 30271 . + . ID=gene-C9E95_RS19800;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=C9E95_RS19800;old_locus_tag=C9E95_20285 NZ_PYJW01000168.1 Protein Homology CDS 28853 30271 . + 0 ID=cds-WP_000081637.1;Parent=gene-C9E95_RS19800;Dbxref=GenBank:WP_000081637.1;Name=WP_000081637.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=C9E95_RS19800;product=glutamate synthase subunit GltD;protein_id=WP_000081637.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 30479 31582 . + . ID=gene-C9E95_RS19805;Name=C9E95_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19805;old_locus_tag=C9E95_20290 NZ_PYJW01000168.1 Protein Homology CDS 30479 31582 . + 0 ID=cds-WP_080204074.1;Parent=gene-C9E95_RS19805;Dbxref=GenBank:WP_080204074.1;Name=WP_080204074.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462242.1;locus_tag=C9E95_RS19805;product=PDDEXK nuclease domain-containing protein;protein_id=WP_080204074.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 31698 32951 . + . ID=gene-C9E95_RS19810;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=C9E95_RS19810;old_locus_tag=C9E95_20295 NZ_PYJW01000168.1 Protein Homology CDS 31698 32951 . + 0 ID=cds-WP_000076263.1;Parent=gene-C9E95_RS19810;Dbxref=GenBank:WP_000076263.1;Name=WP_000076263.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462243.1;locus_tag=C9E95_RS19810;product=cytosine permease;protein_id=WP_000076263.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 32938 34218 . + . ID=gene-C9E95_RS19815;Name=C9E95_RS19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19815;old_locus_tag=C9E95_20300 NZ_PYJW01000168.1 Protein Homology CDS 32938 34218 . + 0 ID=cds-WP_020899291.1;Parent=gene-C9E95_RS19815;Dbxref=GenBank:WP_020899291.1;Name=WP_020899291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462244.1;locus_tag=C9E95_RS19815;product=cytosine deaminase;protein_id=WP_020899291.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 34301 34768 . - . ID=gene-C9E95_RS19820;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=C9E95_RS19820;old_locus_tag=C9E95_20305 NZ_PYJW01000168.1 Protein Homology CDS 34301 34768 . - 0 ID=cds-WP_023994009.1;Parent=gene-C9E95_RS19820;Dbxref=GenBank:WP_023994009.1;Name=WP_023994009.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462245.1;locus_tag=C9E95_RS19820;product=N-acetylneuraminate anomerase;protein_id=WP_023994009.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 34765 35640 . - . ID=gene-C9E95_RS19825;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=C9E95_RS19825;old_locus_tag=C9E95_20310 NZ_PYJW01000168.1 Protein Homology CDS 34765 35640 . - 0 ID=cds-WP_000208970.1;Parent=gene-C9E95_RS19825;Dbxref=GenBank:WP_000208970.1;Name=WP_000208970.1;Ontology_term=GO:0019262,GO:0005524,GO:0009384;gbkey=CDS;gene=nanK;go_function=ATP binding|0005524||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462246.1;locus_tag=C9E95_RS19825;product=N-acetylmannosamine kinase;protein_id=WP_000208970.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 35637 36326 . - . ID=gene-C9E95_RS19830;Name=C9E95_RS19830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19830;old_locus_tag=C9E95_20315 NZ_PYJW01000168.1 Protein Homology CDS 35637 36326 . - 0 ID=cds-WP_000054441.1;Parent=gene-C9E95_RS19830;Dbxref=GenBank:WP_000054441.1;Name=WP_000054441.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462247.1;locus_tag=C9E95_RS19830;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054441.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 36373 37863 . - . ID=gene-C9E95_RS19835;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=C9E95_RS19835;old_locus_tag=C9E95_20320 NZ_PYJW01000168.1 Protein Homology CDS 36373 37863 . - 0 ID=cds-WP_000108071.1;Parent=gene-C9E95_RS19835;Dbxref=GenBank:WP_000108071.1;Name=WP_000108071.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462248.1;locus_tag=C9E95_RS19835;product=sialic acid transporter NanT;protein_id=WP_000108071.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 37979 38872 . - . ID=gene-C9E95_RS19840;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=C9E95_RS19840;old_locus_tag=C9E95_20325 NZ_PYJW01000168.1 Protein Homology CDS 37979 38872 . - 0 ID=cds-WP_001029665.1;Parent=gene-C9E95_RS19840;Dbxref=GenBank:WP_001029665.1;Name=WP_001029665.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462249.1;locus_tag=C9E95_RS19840;product=N-acetylneuraminate lyase;protein_id=WP_001029665.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 39007 39798 . - . ID=gene-C9E95_RS19845;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=C9E95_RS19845;old_locus_tag=C9E95_20330 NZ_PYJW01000168.1 Protein Homology CDS 39007 39798 . - 0 ID=cds-WP_000382926.1;Parent=gene-C9E95_RS19845;Dbxref=GenBank:WP_000382926.1;Name=WP_000382926.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462250.1;locus_tag=C9E95_RS19845;product=transcriptional regulator NanR;protein_id=WP_000382926.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 39907 40407 . - . ID=gene-C9E95_RS19850;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=C9E95_RS19850;old_locus_tag=C9E95_20335 NZ_PYJW01000168.1 Protein Homology CDS 39907 40407 . - 0 ID=cds-WP_000366112.1;Parent=gene-C9E95_RS19850;Dbxref=GenBank:WP_000366112.1;Name=WP_000366112.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462251.1;locus_tag=C9E95_RS19850;product=ClpXP protease specificity-enhancing factor;protein_id=WP_000366112.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 40413 41051 . - . ID=gene-C9E95_RS19855;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=C9E95_RS19855;old_locus_tag=C9E95_20340 NZ_PYJW01000168.1 Protein Homology CDS 40413 41051 . - 0 ID=cds-WP_000257298.1;Parent=gene-C9E95_RS19855;Dbxref=GenBank:WP_000257298.1;Name=WP_000257298.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=C9E95_RS19855;product=stringent starvation protein SspA;protein_id=WP_000257298.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 41314 42066 . - . ID=gene-C9E95_RS19860;Name=C9E95_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19860;old_locus_tag=C9E95_20345 NZ_PYJW01000168.1 Protein Homology CDS 41314 42066 . - 0 ID=cds-WP_000950539.1;Parent=gene-C9E95_RS19860;Dbxref=GenBank:WP_000950539.1;Name=WP_000950539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462253.1;locus_tag=C9E95_RS19860;product=DUF695 domain-containing protein;protein_id=WP_000950539.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 42266 42658 . - . ID=gene-C9E95_RS19865;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=C9E95_RS19865;old_locus_tag=C9E95_20350 NZ_PYJW01000168.1 Protein Homology CDS 42266 42658 . - 0 ID=cds-WP_000829815.1;Parent=gene-C9E95_RS19865;Dbxref=GenBank:WP_000829815.1;Name=WP_000829815.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=C9E95_RS19865;product=30S ribosomal protein S9;protein_id=WP_000829815.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 42674 43102 . - . ID=gene-C9E95_RS19870;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=C9E95_RS19870;old_locus_tag=C9E95_20355 NZ_PYJW01000168.1 Protein Homology CDS 42674 43102 . - 0 ID=cds-WP_000847559.1;Parent=gene-C9E95_RS19870;Dbxref=GenBank:WP_000847559.1;Name=WP_000847559.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=C9E95_RS19870;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 43403 44527 . - . ID=gene-C9E95_RS19875;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=C9E95_RS19875;old_locus_tag=C9E95_20360 NZ_PYJW01000168.1 Protein Homology CDS 43403 44527 . - 0 ID=cds-WP_001191223.1;Parent=gene-C9E95_RS19875;Dbxref=GenBank:WP_001191223.1;Name=WP_001191223.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462256.1;locus_tag=C9E95_RS19875;product=cell division protein ZapE;protein_id=WP_001191223.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 44720 45118 . + . ID=gene-C9E95_RS19880;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=C9E95_RS19880;old_locus_tag=C9E95_20365 NZ_PYJW01000168.1 Protein Homology CDS 44720 45118 . + 0 ID=cds-WP_001519074.1;Parent=gene-C9E95_RS19880;Dbxref=GenBank:WP_001519074.1;Name=WP_001519074.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=C9E95_RS19880;product=Z-ring associated protein ZapG;protein_id=WP_001519074.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 45275 46642 . + . ID=gene-C9E95_RS19885;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=C9E95_RS19885;old_locus_tag=C9E95_20370 NZ_PYJW01000168.1 Protein Homology CDS 45275 46642 . + 0 ID=cds-WP_000716690.1;Parent=gene-C9E95_RS19885;Dbxref=GenBank:WP_000716690.1;Name=WP_000716690.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462258.1;locus_tag=C9E95_RS19885;product=serine endoprotease DegQ;protein_id=WP_000716690.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 46735 47805 . + . ID=gene-C9E95_RS19890;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=C9E95_RS19890;old_locus_tag=C9E95_20375 NZ_PYJW01000168.1 Protein Homology CDS 46735 47805 . + 0 ID=cds-WP_000497705.1;Parent=gene-C9E95_RS19890;Dbxref=GenBank:WP_000497705.1;Name=WP_000497705.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462259.1;locus_tag=C9E95_RS19890;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_000497705.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 47839 48570 . - . ID=gene-C9E95_RS19895;Name=C9E95_RS19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19895;old_locus_tag=C9E95_20380 NZ_PYJW01000168.1 Protein Homology CDS 47839 48570 . - 0 ID=cds-WP_023994008.1;Parent=gene-C9E95_RS19895;Dbxref=GenBank:WP_023994008.1;Name=WP_023994008.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462260.1;locus_tag=C9E95_RS19895;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_023994008.1;transl_table=11 NZ_PYJW01000168.1 RefSeq gene 48590 49011 . - . ID=gene-C9E95_RS19900;Name=C9E95_RS19900;end_range=49011,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19900;old_locus_tag=C9E95_20385;partial=true NZ_PYJW01000168.1 Protein Homology CDS 48590 49011 . - 2 ID=cds-WP_135369877.1;Parent=gene-C9E95_RS19900;Dbxref=GenBank:WP_135369877.1;Name=WP_135369877.1;Ontology_term=GO:0006814,GO:0016829;end_range=49011,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=C9E95_RS19900;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_135369877.1;transl_table=11 ##sequence-region NZ_PYJW01000164.1 1 47911 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000164.1 RefSeq region 1 47911 . + . ID=NZ_PYJW01000164.1:1..47911;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000164.1 RefSeq gene 210 890 . + . ID=gene-C9E95_RS19305;Name=C9E95_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19305;old_locus_tag=C9E95_19775 NZ_PYJW01000164.1 Protein Homology CDS 210 890 . + 0 ID=cds-WP_000106461.1;Parent=gene-C9E95_RS19305;Dbxref=GenBank:WP_000106461.1;Name=WP_000106461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462660.1;locus_tag=C9E95_RS19305;product=isochorismatase family protein;protein_id=WP_000106461.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 1119 1598 . - . ID=gene-C9E95_RS19310;Name=cigR;gbkey=Gene;gene=cigR;gene_biotype=protein_coding;locus_tag=C9E95_RS19310;old_locus_tag=C9E95_19785 NZ_PYJW01000164.1 Protein Homology CDS 1119 1598 . - 0 ID=cds-WP_001065327.1;Parent=gene-C9E95_RS19310;Dbxref=GenBank:WP_001065327.1;Name=WP_001065327.1;gbkey=CDS;gene=cigR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462661.1;locus_tag=C9E95_RS19310;product=anti-virulence regulatory inner membrane protein CigR;protein_id=WP_001065327.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 1700 1786 . - . ID=gene-C9E95_RS23625;Name=mgtU;gbkey=Gene;gene=mgtU;gene_biotype=protein_coding;locus_tag=C9E95_RS23625 NZ_PYJW01000164.1 Protein Homology CDS 1700 1786 . - 0 ID=cds-WP_252515021.1;Parent=gene-C9E95_RS23625;Dbxref=GenBank:WP_252515021.1;Name=WP_252515021.1;gbkey=CDS;gene=mgtU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_251009859.1;locus_tag=C9E95_RS23625;product=magnesium transporter protection protein MgtU;protein_id=WP_252515021.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 1799 1891 . - . ID=gene-C9E95_RS19315;Name=mgtR;gbkey=Gene;gene=mgtR;gene_biotype=protein_coding;locus_tag=C9E95_RS19315;old_locus_tag=C9E95_19790 NZ_PYJW01000164.1 Protein Homology CDS 1799 1891 . - 0 ID=cds-WP_001082117.1;Parent=gene-C9E95_RS19315;Dbxref=GenBank:WP_001082117.1;Name=WP_001082117.1;gbkey=CDS;gene=mgtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082117.1;locus_tag=C9E95_RS19315;product=protein MgtR;protein_id=WP_001082117.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 1913 4639 . - . ID=gene-C9E95_RS19320;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=C9E95_RS19320;old_locus_tag=C9E95_19795 NZ_PYJW01000164.1 Protein Homology CDS 1913 4639 . - 0 ID=cds-WP_000131284.1;Parent=gene-C9E95_RS19320;Dbxref=GenBank:WP_000131284.1;Name=WP_000131284.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462662.1;locus_tag=C9E95_RS19320;product=magnesium-translocating P-type ATPase;protein_id=WP_000131284.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 4859 5554 . - . ID=gene-C9E95_RS19325;Name=C9E95_RS19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19325;old_locus_tag=C9E95_19800 NZ_PYJW01000164.1 Protein Homology CDS 4859 5554 . - 0 ID=cds-WP_000392700.1;Parent=gene-C9E95_RS19325;Dbxref=GenBank:WP_000392700.1;Name=WP_000392700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462663.1;locus_tag=C9E95_RS19325;product=MgtC family protein;protein_id=WP_000392700.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 6063 6965 . + . ID=gene-C9E95_RS19330;Name=C9E95_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19330;old_locus_tag=C9E95_19805 NZ_PYJW01000164.1 Protein Homology CDS 6063 6965 . + 0 ID=cds-WP_001682335.1;Parent=gene-C9E95_RS19330;Dbxref=GenBank:WP_001682335.1;Name=WP_001682335.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462664.1;locus_tag=C9E95_RS19330;product=EamA family transporter;protein_id=WP_001682335.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 7008 7949 . - . ID=gene-C9E95_RS19335;Name=C9E95_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19335;old_locus_tag=C9E95_19810 NZ_PYJW01000164.1 Protein Homology CDS 7008 7949 . - 0 ID=cds-WP_039590861.1;Parent=gene-C9E95_RS19335;Dbxref=GenBank:WP_039590861.1;Name=WP_039590861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462665.1;locus_tag=C9E95_RS19335;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_039590861.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 8185 8928 . - . ID=gene-C9E95_RS19340;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=C9E95_RS19340;old_locus_tag=C9E95_19815 NZ_PYJW01000164.1 Protein Homology CDS 8185 8928 . - 0 ID=cds-WP_001186147.1;Parent=gene-C9E95_RS19340;Dbxref=GenBank:WP_001186147.1;Name=WP_001186147.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462666.1;locus_tag=C9E95_RS19340;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_001186147.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 8915 10024 . - . ID=gene-C9E95_RS19345;Name=dgaE;gbkey=Gene;gene=dgaE;gene_biotype=protein_coding;locus_tag=C9E95_RS19345;old_locus_tag=C9E95_19820 NZ_PYJW01000164.1 Protein Homology CDS 8915 10024 . - 0 ID=cds-WP_020838466.1;Parent=gene-C9E95_RS19345;Dbxref=GenBank:WP_020838466.1;Name=WP_020838466.1;Ontology_term=GO:0016829;gbkey=CDS;gene=dgaE;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462667.1;locus_tag=C9E95_RS19345;product=D-glucosaminate-6-phosphate ammonia lyase;protein_id=WP_020838466.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 10028 10888 . - . ID=gene-C9E95_RS19350;Name=C9E95_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19350;old_locus_tag=C9E95_19825 NZ_PYJW01000164.1 Protein Homology CDS 10028 10888 . - 0 ID=cds-WP_012512877.1;Parent=gene-C9E95_RS19350;Dbxref=GenBank:WP_012512877.1;Name=WP_012512877.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462668.3;locus_tag=C9E95_RS19350;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_012512877.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 10885 11634 . - . ID=gene-C9E95_RS19355;Name=C9E95_RS19355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19355;old_locus_tag=C9E95_19830 NZ_PYJW01000164.1 Protein Homology CDS 10885 11634 . - 0 ID=cds-WP_000380259.1;Parent=gene-C9E95_RS19355;Dbxref=GenBank:WP_000380259.1;Name=WP_000380259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462669.1;locus_tag=C9E95_RS19355;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000380259.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 11780 12265 . - . ID=gene-C9E95_RS19360;Name=C9E95_RS19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19360;old_locus_tag=C9E95_19835 NZ_PYJW01000164.1 Protein Homology CDS 11780 12265 . - 0 ID=cds-WP_001284295.1;Parent=gene-C9E95_RS19360;Dbxref=GenBank:WP_001284295.1;Name=WP_001284295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462670.1;locus_tag=C9E95_RS19360;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WP_001284295.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 12276 12701 . - . ID=gene-C9E95_RS19365;Name=C9E95_RS19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19365;old_locus_tag=C9E95_19840 NZ_PYJW01000164.1 Protein Homology CDS 12276 12701 . - 0 ID=cds-WP_000214106.1;Parent=gene-C9E95_RS19365;Dbxref=GenBank:WP_000214106.1;Name=WP_000214106.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462671.1;locus_tag=C9E95_RS19365;product=PTS sugar transporter subunit IIA;protein_id=WP_000214106.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 12923 15721 . - . ID=gene-C9E95_RS19370;Name=dagR;gbkey=Gene;gene=dagR;gene_biotype=protein_coding;locus_tag=C9E95_RS19370;old_locus_tag=C9E95_19850 NZ_PYJW01000164.1 Protein Homology CDS 12923 15721 . - 0 ID=cds-WP_001252672.1;Parent=gene-C9E95_RS19370;Dbxref=GenBank:WP_001252672.1;Name=WP_001252672.1;Ontology_term=GO:0006355,GO:0009401,GO:0005524,GO:0016887;gbkey=CDS;gene=dagR;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=C9E95_RS19370;product=transcriptional regulator DagR;protein_id=WP_001252672.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 15918 16211 . + . ID=gene-C9E95_RS19375;Name=C9E95_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19375;old_locus_tag=C9E95_19855 NZ_PYJW01000164.1 Protein Homology CDS 15918 16211 . + 0 ID=cds-WP_023138298.1;Parent=gene-C9E95_RS19375;Dbxref=GenBank:WP_023138298.1;Name=WP_023138298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462673.1;locus_tag=C9E95_RS19375;product=YicS family protein;protein_id=WP_023138298.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 16317 17699 . + . ID=gene-C9E95_RS19380;Name=C9E95_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19380;old_locus_tag=C9E95_19860 NZ_PYJW01000164.1 Protein Homology CDS 16317 17699 . + 0 ID=cds-WP_023993458.1;Parent=gene-C9E95_RS19380;Dbxref=GenBank:WP_023993458.1;Name=WP_023993458.1;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462674.1;locus_tag=C9E95_RS19380;product=glycoside hydrolase family 1 protein;protein_id=WP_023993458.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 17759 18952 . - . ID=gene-C9E95_RS19385;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=C9E95_RS19385;old_locus_tag=C9E95_19865 NZ_PYJW01000164.1 Protein Homology CDS 17759 18952 . - 0 ID=cds-WP_001004798.1;Parent=gene-C9E95_RS19385;Dbxref=GenBank:WP_001004798.1;Name=WP_001004798.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462675.1;locus_tag=C9E95_RS19385;product=purine ribonucleoside efflux pump NepI;protein_id=WP_001004798.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 19168 19527 . + . ID=gene-C9E95_RS19390;Name=C9E95_RS19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19390;old_locus_tag=C9E95_19870 NZ_PYJW01000164.1 Protein Homology CDS 19168 19527 . + 0 ID=cds-WP_023216562.1;Parent=gene-C9E95_RS19390;Dbxref=GenBank:WP_023216562.1;Name=WP_023216562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462676.1;locus_tag=C9E95_RS19390;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_023216562.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 19511 19834 . + . ID=gene-C9E95_RS19395;Name=C9E95_RS19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19395;old_locus_tag=C9E95_19875 NZ_PYJW01000164.1 Protein Homology CDS 19511 19834 . + 0 ID=cds-WP_001274839.1;Parent=gene-C9E95_RS19395;Dbxref=GenBank:WP_001274839.1;Name=WP_001274839.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462677.1;locus_tag=C9E95_RS19395;product=helix-turn-helix domain-containing protein;protein_id=WP_001274839.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 19925 20194 . - . ID=gene-C9E95_RS19400;Name=C9E95_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19400;old_locus_tag=C9E95_19880 NZ_PYJW01000164.1 Protein Homology CDS 19925 20194 . - 0 ID=cds-WP_000621109.1;Parent=gene-C9E95_RS19400;Dbxref=GenBank:WP_000621109.1;Name=WP_000621109.1;Ontology_term=GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462678.1;locus_tag=C9E95_RS19400;product=HPr family phosphocarrier protein;protein_id=WP_000621109.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 20204 21064 . - . ID=gene-C9E95_RS19405;Name=C9E95_RS19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19405;old_locus_tag=C9E95_19885 NZ_PYJW01000164.1 Protein Homology CDS 20204 21064 . - 0 ID=cds-WP_080095202.1;Parent=gene-C9E95_RS19405;Dbxref=GenBank:WP_080095202.1;Name=WP_080095202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462679.1;locus_tag=C9E95_RS19405;product=class II aldolase;protein_id=WP_080095202.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 21127 22611 . - . ID=gene-C9E95_RS19410;Name=C9E95_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19410;old_locus_tag=C9E95_19890 NZ_PYJW01000164.1 Protein Homology CDS 21127 22611 . - 0 ID=cds-WP_001113558.1;Parent=gene-C9E95_RS19410;Dbxref=GenBank:WP_001113558.1;Name=WP_001113558.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462680.1;locus_tag=C9E95_RS19410;product=FGGY-family carbohydrate kinase;protein_id=WP_001113558.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 22604 23962 . - . ID=gene-C9E95_RS19415;Name=C9E95_RS19415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19415;old_locus_tag=C9E95_19895 NZ_PYJW01000164.1 Protein Homology CDS 22604 23962 . - 0 ID=cds-WP_000997824.1;Parent=gene-C9E95_RS19415;Dbxref=GenBank:WP_000997824.1;Name=WP_000997824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462681.1;locus_tag=C9E95_RS19415;product=PTS galactitol transporter subunit IIC;protein_id=WP_000997824.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 24038 24325 . - . ID=gene-C9E95_RS19420;Name=C9E95_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19420;old_locus_tag=C9E95_19900 NZ_PYJW01000164.1 Protein Homology CDS 24038 24325 . - 0 ID=cds-WP_000041396.1;Parent=gene-C9E95_RS19420;Dbxref=GenBank:WP_000041396.1;Name=WP_000041396.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462682.1;locus_tag=C9E95_RS19420;product=PTS sugar transporter subunit IIB;protein_id=WP_000041396.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 24322 24795 . - . ID=gene-C9E95_RS19425;Name=C9E95_RS19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19425;old_locus_tag=C9E95_19905 NZ_PYJW01000164.1 Protein Homology CDS 24322 24795 . - 0 ID=cds-WP_001152237.1;Parent=gene-C9E95_RS19425;Dbxref=GenBank:WP_001152237.1;Name=WP_001152237.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462683.1;locus_tag=C9E95_RS19425;product=PTS sugar transporter subunit IIA;protein_id=WP_001152237.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 24813 25556 . - . ID=gene-C9E95_RS19430;Name=C9E95_RS19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19430;old_locus_tag=C9E95_19910 NZ_PYJW01000164.1 Protein Homology CDS 24813 25556 . - 0 ID=cds-WP_000854956.1;Parent=gene-C9E95_RS19430;Dbxref=GenBank:WP_000854956.1;Name=WP_000854956.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462684.1;locus_tag=C9E95_RS19430;product=GntR family transcriptional regulator;protein_id=WP_000854956.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 25909 26361 . - . ID=gene-C9E95_RS19435;Name=C9E95_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19435;old_locus_tag=C9E95_19915 NZ_PYJW01000164.1 Protein Homology CDS 25909 26361 . - 0 ID=cds-WP_001519640.1;Parent=gene-C9E95_RS19435;Dbxref=GenBank:WP_001519640.1;Name=WP_001519640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462685.1;locus_tag=C9E95_RS19435;product=DUF1198 domain-containing protein;protein_id=WP_001519640.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 26554 27945 . - . ID=gene-C9E95_RS19440;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=C9E95_RS19440;old_locus_tag=C9E95_19920 NZ_PYJW01000164.1 Protein Homology CDS 26554 27945 . - 0 ID=cds-WP_000879181.1;Parent=gene-C9E95_RS19440;Dbxref=GenBank:WP_000879181.1;Name=WP_000879181.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462686.1;locus_tag=C9E95_RS19440;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_000879181.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 28088 29416 . - . ID=gene-C9E95_RS19445;Name=C9E95_RS19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19445;old_locus_tag=C9E95_19925 NZ_PYJW01000164.1 Protein Homology CDS 28088 29416 . - 0 ID=cds-WP_000948164.1;Parent=gene-C9E95_RS19445;Dbxref=GenBank:WP_000948164.1;Name=WP_000948164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462687.1;locus_tag=C9E95_RS19445;product=MFS transporter;protein_id=WP_000948164.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 29426 30928 . - . ID=gene-C9E95_RS19450;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=C9E95_RS19450;old_locus_tag=C9E95_19930 NZ_PYJW01000164.1 Protein Homology CDS 29426 30928 . - 0 ID=cds-WP_080203807.1;Parent=gene-C9E95_RS19450;Dbxref=GenBank:WP_080203807.1;Name=WP_080203807.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462688.1;locus_tag=C9E95_RS19450;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_080203807.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 30928 31518 . - . ID=gene-C9E95_RS19455;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=C9E95_RS19455;old_locus_tag=C9E95_19935 NZ_PYJW01000164.1 Protein Homology CDS 30928 31518 . - 0 ID=cds-WP_000633672.1;Parent=gene-C9E95_RS19455;Dbxref=GenBank:WP_000633672.1;Name=WP_000633672.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462689.1;locus_tag=C9E95_RS19455;product=transcriptional regulator UhpA;protein_id=WP_000633672.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 31593 32606 . - . ID=gene-C9E95_RS19460;Name=C9E95_RS19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19460;old_locus_tag=C9E95_19940 NZ_PYJW01000164.1 Protein Homology CDS 31593 32606 . - 0 ID=cds-WP_000213210.1;Parent=gene-C9E95_RS19460;Dbxref=GenBank:WP_000213210.1;Name=WP_000213210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462690.1;locus_tag=C9E95_RS19460;product=aldose 1-epimerase family protein;protein_id=WP_000213210.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 32618 33934 . - . ID=gene-C9E95_RS19465;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=C9E95_RS19465;old_locus_tag=C9E95_19945 NZ_PYJW01000164.1 Protein Homology CDS 32618 33934 . - 0 ID=cds-WP_000998358.1;Parent=gene-C9E95_RS19465;Dbxref=GenBank:WP_000998358.1;Name=WP_000998358.1;Ontology_term=GO:0015756,GO:0015150,GO:0015535;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA,fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462691.1;locus_tag=C9E95_RS19465;product=L-fucose:H+ symporter permease;protein_id=WP_000998358.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 33965 34885 . - . ID=gene-C9E95_RS19470;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=C9E95_RS19470;old_locus_tag=C9E95_19950 NZ_PYJW01000164.1 Protein Homology CDS 33965 34885 . - 0 ID=cds-WP_000350272.1;Parent=gene-C9E95_RS19470;Dbxref=GenBank:WP_000350272.1;Name=WP_000350272.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462692.1;locus_tag=C9E95_RS19470;product=ribokinase;protein_id=WP_000350272.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 35199 35984 . + . ID=gene-C9E95_RS19475;Name=C9E95_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19475;old_locus_tag=C9E95_19955 NZ_PYJW01000164.1 Protein Homology CDS 35199 35984 . + 0 ID=cds-WP_000448638.1;Parent=gene-C9E95_RS19475;Dbxref=GenBank:WP_000448638.1;Name=WP_000448638.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462693.1;locus_tag=C9E95_RS19475;product=DeoR family transcriptional regulator;protein_id=WP_000448638.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 35986 36276 . - . ID=gene-C9E95_RS19480;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=C9E95_RS19480;old_locus_tag=C9E95_19960 NZ_PYJW01000164.1 Protein Homology CDS 35986 36276 . - 0 ID=cds-WP_001171826.1;Parent=gene-C9E95_RS19480;Dbxref=GenBank:WP_001171826.1;Name=WP_001171826.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462694.1;locus_tag=C9E95_RS19480;product=acetolactate synthase small subunit;protein_id=WP_001171826.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 36280 37968 . - . ID=gene-C9E95_RS19485;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=C9E95_RS19485;old_locus_tag=C9E95_19965 NZ_PYJW01000164.1 Protein Homology CDS 36280 37968 . - 0 ID=cds-WP_000168439.1;Parent=gene-C9E95_RS19485;Dbxref=GenBank:WP_000168439.1;Name=WP_000168439.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=C9E95_RS19485;product=acetolactate synthase large subunit;protein_id=WP_000168439.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 38075 38173 . - . ID=gene-C9E95_RS19490;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=C9E95_RS19490;old_locus_tag=C9E95_19970 NZ_PYJW01000164.1 Protein Homology CDS 38075 38173 . - 0 ID=cds-WP_001541152.1;Parent=gene-C9E95_RS19490;Dbxref=GenBank:WP_001541152.1;Name=WP_001541152.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462696.1;locus_tag=C9E95_RS19490;product=ilvB operon leader peptide IvbL;protein_id=WP_001541152.1;transl_table=11 NZ_PYJW01000164.1 RefSeq pseudogene 38696 38810 . + . ID=gene-C9E95_RS19495;Name=C9E95_RS19495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS19495;old_locus_tag=C9E95_19975;pseudo=true NZ_PYJW01000164.1 Protein Homology CDS 38696 38810 . + 0 ID=cds-C9E95_RS19495;Parent=gene-C9E95_RS19495;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009325922.1;locus_tag=C9E95_RS19495;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 38807 38896 . + . ID=gene-C9E95_RS19500;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=C9E95_RS19500;old_locus_tag=C9E95_19980 NZ_PYJW01000164.1 Protein Homology CDS 38807 38896 . + 0 ID=cds-WP_000117642.1;Parent=gene-C9E95_RS19500;Dbxref=GenBank:WP_000117642.1;Name=WP_000117642.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453107.1;locus_tag=C9E95_RS19500;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_000117642.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 38989 39849 . + . ID=gene-C9E95_RS19505;Name=C9E95_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19505;old_locus_tag=C9E95_19985 NZ_PYJW01000164.1 Protein Homology CDS 38989 39849 . + 0 ID=cds-WP_001531658.1;Parent=gene-C9E95_RS19505;Dbxref=GenBank:WP_001531658.1;Name=WP_001531658.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462698.3;locus_tag=C9E95_RS19505;product=DMT family transporter;protein_id=WP_001531658.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 40052 41236 . + . ID=gene-C9E95_RS19510;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=C9E95_RS19510;old_locus_tag=C9E95_19990 NZ_PYJW01000164.1 Protein Homology CDS 40052 41236 . + 0 ID=cds-WP_000828737.1;Parent=gene-C9E95_RS19510;Dbxref=GenBank:WP_000828737.1;Name=WP_000828737.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462699.1;locus_tag=C9E95_RS19510;product=multidrug efflux MFS transporter EmrD;protein_id=WP_000828737.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 41163 42248 . - . ID=gene-C9E95_RS19515;Name=C9E95_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19515;old_locus_tag=C9E95_19995 NZ_PYJW01000164.1 Protein Homology CDS 41163 42248 . - 0 ID=cds-WP_000238928.1;Parent=gene-C9E95_RS19515;Dbxref=GenBank:WP_000238928.1;Name=WP_000238928.1;Ontology_term=GO:0000272,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462700.1;locus_tag=C9E95_RS19515;product=cellulase family glycosylhydrolase;protein_id=WP_000238928.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 42312 43235 . - . ID=gene-C9E95_RS19520;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=C9E95_RS19520;old_locus_tag=C9E95_20000 NZ_PYJW01000164.1 Protein Homology CDS 42312 43235 . - 0 ID=cds-WP_001522218.1;Parent=gene-C9E95_RS19520;Dbxref=GenBank:WP_001522218.1;Name=WP_001522218.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462701.1;locus_tag=C9E95_RS19520;product=DNA-binding transcriptional regulator DsdC;protein_id=WP_001522218.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 43461 44798 . + . ID=gene-C9E95_RS19525;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=C9E95_RS19525;old_locus_tag=C9E95_20005 NZ_PYJW01000164.1 Protein Homology CDS 43461 44798 . + 0 ID=cds-WP_135369876.1;Parent=gene-C9E95_RS19525;Dbxref=GenBank:WP_135369876.1;Name=WP_135369876.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462702.1;locus_tag=C9E95_RS19525;product=D-serine transporter DsdX;protein_id=WP_135369876.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 44816 46138 . + . ID=gene-C9E95_RS19530;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=C9E95_RS19530;old_locus_tag=C9E95_20010 NZ_PYJW01000164.1 Protein Homology CDS 44816 46138 . + 0 ID=cds-WP_000427993.1;Parent=gene-C9E95_RS19530;Dbxref=GenBank:WP_000427993.1;Name=WP_000427993.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;gene=dsdA;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462703.1;locus_tag=C9E95_RS19530;product=D-serine ammonia-lyase;protein_id=WP_000427993.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 46220 46750 . - . ID=gene-C9E95_RS19535;Name=C9E95_RS19535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19535;old_locus_tag=C9E95_20015 NZ_PYJW01000164.1 Protein Homology CDS 46220 46750 . - 0 ID=cds-WP_017442041.1;Parent=gene-C9E95_RS19535;Dbxref=GenBank:WP_017442041.1;Name=WP_017442041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462704.1;locus_tag=C9E95_RS19535;product=radical SAM protein;protein_id=WP_017442041.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 46747 47109 . - . ID=gene-C9E95_RS19540;Name=C9E95_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19540;old_locus_tag=C9E95_20020 NZ_PYJW01000164.1 Protein Homology CDS 46747 47109 . - 0 ID=cds-WP_017465922.1;Parent=gene-C9E95_RS19540;Dbxref=GenBank:WP_017465922.1;Name=WP_017465922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462705.1;locus_tag=C9E95_RS19540;product=DUF202 domain-containing protein;protein_id=WP_017465922.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 47099 47446 . - . ID=gene-C9E95_RS19545;Name=C9E95_RS19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19545;old_locus_tag=C9E95_20025 NZ_PYJW01000164.1 Protein Homology CDS 47099 47446 . - 0 ID=cds-WP_000703963.1;Parent=gene-C9E95_RS19545;Dbxref=GenBank:WP_000703963.1;Name=WP_000703963.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462706.1;locus_tag=C9E95_RS19545;product=YidH family protein;protein_id=WP_000703963.1;transl_table=11 NZ_PYJW01000164.1 RefSeq gene 47566 47853 . - . ID=gene-C9E95_RS23220;Name=C9E95_RS23220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23220 NZ_PYJW01000164.1 GeneMarkS-2+ CDS 47566 47853 . - 0 ID=cds-WP_162564181.1;Parent=gene-C9E95_RS23220;Dbxref=GenBank:WP_162564181.1;Name=WP_162564181.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS23220;product=hypothetical protein;protein_id=WP_162564181.1;transl_table=11 ##sequence-region NZ_PYJW01000190.1 1 47326 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000190.1 RefSeq region 1 47326 . + . ID=NZ_PYJW01000190.1:1..47326;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000190.1 RefSeq gene 137 1681 . - . ID=gene-C9E95_RS22195;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=C9E95_RS22195;old_locus_tag=C9E95_22745 NZ_PYJW01000190.1 Protein Homology CDS 137 1681 . - 0 ID=cds-WP_135369890.1;Parent=gene-C9E95_RS22195;Dbxref=GenBank:WP_135369890.1;Name=WP_135369890.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=cadC;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461492.1;locus_tag=C9E95_RS22195;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_135369890.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 1863 3053 . - . ID=gene-C9E95_RS22200;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=C9E95_RS22200;old_locus_tag=C9E95_22750 NZ_PYJW01000190.1 Protein Homology CDS 1863 3053 . - 0 ID=cds-WP_000883145.1;Parent=gene-C9E95_RS22200;Dbxref=GenBank:WP_000883145.1;Name=WP_000883145.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461491.1;locus_tag=C9E95_RS22200;product=NO-inducible flavohemoprotein;protein_id=WP_000883145.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 3378 4631 . + . ID=gene-C9E95_RS22205;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=C9E95_RS22205;old_locus_tag=C9E95_22755 NZ_PYJW01000190.1 Protein Homology CDS 3378 4631 . + 0 ID=cds-WP_000919178.1;Parent=gene-C9E95_RS22205;Dbxref=GenBank:WP_000919178.1;Name=WP_000919178.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=C9E95_RS22205;product=serine hydroxymethyltransferase;protein_id=WP_000919178.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 4827 5966 . + . ID=gene-C9E95_RS22210;Name=C9E95_RS22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22210;old_locus_tag=C9E95_22760 NZ_PYJW01000190.1 Protein Homology CDS 4827 5966 . + 0 ID=cds-WP_001173729.1;Parent=gene-C9E95_RS22210;Dbxref=GenBank:WP_001173729.1;Name=WP_001173729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461489.1;locus_tag=C9E95_RS22210;product=3-phenylpropionate MFS transporter;protein_id=WP_001173729.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 5961 7238 . - . ID=gene-C9E95_RS22215;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=C9E95_RS22215;old_locus_tag=C9E95_22765 NZ_PYJW01000190.1 Protein Homology CDS 5961 7238 . - 0 ID=cds-WP_000982963.1;Parent=gene-C9E95_RS22215;Dbxref=GenBank:WP_000982963.1;Name=WP_000982963.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461488.1;locus_tag=C9E95_RS22215;product=stationary phase inducible protein CsiE;protein_id=WP_000982963.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 7364 8002 . + . ID=gene-C9E95_RS22220;Name=C9E95_RS22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22220;old_locus_tag=C9E95_22770 NZ_PYJW01000190.1 Protein Homology CDS 7364 8002 . + 0 ID=cds-WP_023993586.1;Parent=gene-C9E95_RS22220;Dbxref=GenBank:WP_023993586.1;Name=WP_023993586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461487.1;locus_tag=C9E95_RS22220;product=DUF1007 family protein;protein_id=WP_023993586.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 7993 8979 . + . ID=gene-C9E95_RS22225;Name=C9E95_RS22225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22225;old_locus_tag=C9E95_22775 NZ_PYJW01000190.1 Protein Homology CDS 7993 8979 . + 0 ID=cds-WP_023182384.1;Parent=gene-C9E95_RS22225;Dbxref=GenBank:WP_023182384.1;Name=WP_023182384.1;Ontology_term=GO:0035444,GO:0015099,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=nickel cation transmembrane transport|0035444||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461486.1;locus_tag=C9E95_RS22225;product=nickel/cobalt transporter;protein_id=WP_023182384.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 8980 9993 . - . ID=gene-C9E95_RS22230;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=protein_coding;locus_tag=C9E95_RS22230;old_locus_tag=C9E95_22780 NZ_PYJW01000190.1 Protein Homology CDS 8980 9993 . - 0 ID=cds-WP_000020685.1;Parent=gene-C9E95_RS22230;Dbxref=GenBank:WP_000020685.1;Name=WP_000020685.1;Ontology_term=GO:0006790,GO:0016002;gbkey=CDS;gene=asrC;go_function=sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461485.1;locus_tag=C9E95_RS22230;product=sulfite reductase subunit C;protein_id=WP_000020685.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 10004 10822 . - . ID=gene-C9E95_RS22235;Name=asrB;gbkey=Gene;gene=asrB;gene_biotype=protein_coding;locus_tag=C9E95_RS22235;old_locus_tag=C9E95_22785 NZ_PYJW01000190.1 Protein Homology CDS 10004 10822 . - 0 ID=cds-WP_000017587.1;Parent=gene-C9E95_RS22235;Dbxref=GenBank:WP_000017587.1;Name=WP_000017587.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrB;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461484.1;locus_tag=C9E95_RS22235;product=anaerobic sulfite reductase subunit AsrB;protein_id=WP_000017587.1;transl_table=11 NZ_PYJW01000190.1 RefSeq pseudogene 10826 11868 . - . ID=gene-C9E95_RS22240;Name=asrA;gbkey=Gene;gene=asrA;gene_biotype=pseudogene;locus_tag=C9E95_RS22240;old_locus_tag=C9E95_22790;pseudo=true NZ_PYJW01000190.1 Protein Homology CDS 10826 11868 . - 0 ID=cds-C9E95_RS22240;Parent=gene-C9E95_RS22240;Note=frameshifted;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrA;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461483.1;locus_tag=C9E95_RS22240;product=anaerobic sulfite reductase subunit AsrA;pseudo=true;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 12050 12928 . - . ID=gene-C9E95_RS22245;Name=C9E95_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22245;old_locus_tag=C9E95_22795 NZ_PYJW01000190.1 Protein Homology CDS 12050 12928 . - 0 ID=cds-WP_000174939.1;Parent=gene-C9E95_RS22245;Dbxref=GenBank:WP_000174939.1;Name=WP_000174939.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461482.1;locus_tag=C9E95_RS22245;product=alpha/beta hydrolase;protein_id=WP_000174939.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 13073 13876 . - . ID=gene-C9E95_RS22250;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=C9E95_RS22250;old_locus_tag=C9E95_22800 NZ_PYJW01000190.1 Protein Homology CDS 13073 13876 . - 0 ID=cds-WP_000553467.1;Parent=gene-C9E95_RS22250;Dbxref=GenBank:WP_000553467.1;Name=WP_000553467.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=C9E95_RS22250;product=inositol-1-monophosphatase;protein_id=WP_000553467.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 13995 14726 . + . ID=gene-C9E95_RS22255;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=C9E95_RS22255;old_locus_tag=C9E95_22805 NZ_PYJW01000190.1 Protein Homology CDS 13995 14726 . + 0 ID=cds-WP_000940032.1;Parent=gene-C9E95_RS22255;Dbxref=GenBank:WP_000940032.1;Name=WP_000940032.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461480.1;locus_tag=C9E95_RS22255;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_000940032.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 14886 15380 . + . ID=gene-C9E95_RS22260;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=C9E95_RS22260;old_locus_tag=C9E95_22810 NZ_PYJW01000190.1 Protein Homology CDS 14886 15380 . + 0 ID=cds-WP_001241346.1;Parent=gene-C9E95_RS22260;Dbxref=GenBank:WP_001241346.1;Name=WP_001241346.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241352.1;locus_tag=C9E95_RS22260;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241346.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 15561 16775 . + . ID=gene-C9E95_RS22265;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=C9E95_RS22265;old_locus_tag=C9E95_22815 NZ_PYJW01000190.1 Protein Homology CDS 15561 16775 . + 0 ID=cds-WP_000775263.1;Parent=gene-C9E95_RS22265;Dbxref=GenBank:WP_000775263.1;Name=WP_000775263.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=C9E95_RS22265;product=cysteine desulfurase;protein_id=WP_000775263.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 16803 17189 . + . ID=gene-C9E95_RS22270;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=C9E95_RS22270;old_locus_tag=C9E95_22820 NZ_PYJW01000190.1 Protein Homology CDS 16803 17189 . + 0 ID=cds-WP_000331704.1;Parent=gene-C9E95_RS22270;Dbxref=GenBank:WP_000331704.1;Name=WP_000331704.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=C9E95_RS22270;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_000331704.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 17218 17541 . + . ID=gene-C9E95_RS22275;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=C9E95_RS22275;old_locus_tag=C9E95_22825 NZ_PYJW01000190.1 Protein Homology CDS 17218 17541 . + 0 ID=cds-WP_000028952.1;Parent=gene-C9E95_RS22275;Dbxref=GenBank:WP_000028952.1;Name=WP_000028952.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461476.1;locus_tag=C9E95_RS22275;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_000028952.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 17737 18252 . + . ID=gene-C9E95_RS22280;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=C9E95_RS22280;old_locus_tag=C9E95_22830 NZ_PYJW01000190.1 Protein Homology CDS 17737 18252 . + 0 ID=cds-WP_135369891.1;Parent=gene-C9E95_RS22280;Dbxref=GenBank:WP_135369891.1;Name=WP_135369891.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461475.1;locus_tag=C9E95_RS22280;product=co-chaperone HscB;protein_id=WP_135369891.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 18265 20115 . + . ID=gene-C9E95_RS22285;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=C9E95_RS22285;old_locus_tag=C9E95_22835 NZ_PYJW01000190.1 Protein Homology CDS 18265 20115 . + 0 ID=cds-WP_001196652.1;Parent=gene-C9E95_RS22285;Dbxref=GenBank:WP_001196652.1;Name=WP_001196652.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=C9E95_RS22285;product=Fe-S protein assembly chaperone HscA;protein_id=WP_001196652.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 20117 20452 . + . ID=gene-C9E95_RS22290;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=C9E95_RS22290;old_locus_tag=C9E95_22840 NZ_PYJW01000190.1 Protein Homology CDS 20117 20452 . + 0 ID=cds-WP_001124466.1;Parent=gene-C9E95_RS22290;Dbxref=GenBank:WP_001124466.1;Name=WP_001124466.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=C9E95_RS22290;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_001124466.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 20464 20664 . + . ID=gene-C9E95_RS22295;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=C9E95_RS22295;old_locus_tag=C9E95_22845 NZ_PYJW01000190.1 Protein Homology CDS 20464 20664 . + 0 ID=cds-WP_023179645.1;Parent=gene-C9E95_RS22295;Dbxref=GenBank:WP_023179645.1;Name=WP_023179645.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=C9E95_RS22295;product=Fe-S cluster assembly protein IscX;protein_id=WP_023179645.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 20911 22194 . + . ID=gene-C9E95_RS22300;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=C9E95_RS22300;old_locus_tag=C9E95_22855 NZ_PYJW01000190.1 Protein Homology CDS 20911 22194 . + 0 ID=cds-WP_000133541.1;Parent=gene-C9E95_RS22300;Dbxref=GenBank:WP_000133541.1;Name=WP_000133541.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461471.1;locus_tag=C9E95_RS22300;product=aminopeptidase PepB;protein_id=WP_000133541.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 22304 23089 . + . ID=gene-C9E95_RS22305;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=C9E95_RS22305;old_locus_tag=C9E95_22865 NZ_PYJW01000190.1 Protein Homology CDS 22304 23089 . + 0 ID=cds-WP_165450957.1;Parent=gene-C9E95_RS22305;Dbxref=GenBank:WP_165450957.1;Name=WP_165450957.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311415.2;locus_tag=C9E95_RS22305;product=enhanced serine sensitivity protein SseB;protein_id=WP_165450957.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 23126 23242 . - . ID=gene-C9E95_RS23600;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=C9E95_RS23600 NZ_PYJW01000190.1 Protein Homology CDS 23126 23242 . - 0 ID=cds-WP_242617172.1;Parent=gene-C9E95_RS23600;Dbxref=GenBank:WP_242617172.1;Name=WP_242617172.1;gbkey=CDS;gene=timP;inference=COORDINATES: protein motif:HMM:NF040796.1;locus_tag=C9E95_RS23600;product=small toxic inner membrane protein TimP;protein_id=WP_242617172.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 23658 24326 . - . ID=gene-C9E95_RS22315;Name=C9E95_RS22315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22315;old_locus_tag=C9E95_22875 NZ_PYJW01000190.1 Protein Homology CDS 23658 24326 . - 0 ID=cds-WP_080203856.1;Parent=gene-C9E95_RS22315;Dbxref=GenBank:WP_080203856.1;Name=WP_080203856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461469.1;locus_tag=C9E95_RS22315;product=DUF5066 family protein;protein_id=WP_080203856.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 24369 24593 . + . ID=gene-C9E95_RS23225;Name=C9E95_RS23225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23225 NZ_PYJW01000190.1 Protein Homology CDS 24369 24593 . + 0 ID=cds-WP_024133232.1;Parent=gene-C9E95_RS23225;Dbxref=GenBank:WP_024133232.1;Name=WP_024133232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344128.1;locus_tag=C9E95_RS23225;product=hypothetical protein;protein_id=WP_024133232.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 24573 25415 . - . ID=gene-C9E95_RS22320;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=C9E95_RS22320;old_locus_tag=C9E95_22880 NZ_PYJW01000190.1 Protein Homology CDS 24573 25415 . - 0 ID=cds-WP_000205241.1;Parent=gene-C9E95_RS22320;Dbxref=GenBank:WP_000205241.1;Name=WP_000205241.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461468.1;locus_tag=C9E95_RS22320;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_000205241.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 25624 30558 . + . ID=gene-C9E95_RS22325;Name=C9E95_RS22325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22325;old_locus_tag=C9E95_22885 NZ_PYJW01000190.1 Protein Homology CDS 25624 30558 . + 0 ID=cds-WP_080203855.1;Parent=gene-C9E95_RS22325;Dbxref=GenBank:WP_080203855.1;Name=WP_080203855.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461467.1;locus_tag=C9E95_RS22325;product=alpha-2-macroglobulin family protein;protein_id=WP_080203855.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 30559 32874 . + . ID=gene-C9E95_RS22330;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=C9E95_RS22330;old_locus_tag=C9E95_22890 NZ_PYJW01000190.1 Protein Homology CDS 30559 32874 . + 0 ID=cds-WP_080203854.1;Parent=gene-C9E95_RS22330;Dbxref=GenBank:WP_080203854.1;Name=WP_080203854.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=C9E95_RS22330;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_080203854.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 33030 35408 . + . ID=gene-C9E95_RS22335;Name=C9E95_RS22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22335;old_locus_tag=C9E95_22895 NZ_PYJW01000190.1 Protein Homology CDS 33030 35408 . + 0 ID=cds-WP_348631212.1;Parent=gene-C9E95_RS22335;Dbxref=GenBank:WP_348631212.1;Name=WP_348631212.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664463.1;locus_tag=C9E95_RS22335;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_348631212.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 35405 36034 . + . ID=gene-C9E95_RS22340;Name=C9E95_RS22340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22340;old_locus_tag=C9E95_22900 NZ_PYJW01000190.1 Protein Homology CDS 35405 36034 . + 0 ID=cds-WP_000077436.1;Parent=gene-C9E95_RS22340;Dbxref=GenBank:WP_000077436.1;Name=WP_000077436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461464.1;locus_tag=C9E95_RS22340;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_000077436.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 36027 36836 . + . ID=gene-C9E95_RS22345;Name=C9E95_RS22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22345;old_locus_tag=C9E95_22905 NZ_PYJW01000190.1 Protein Homology CDS 36027 36836 . + 0 ID=cds-WP_080203852.1;Parent=gene-C9E95_RS22345;Dbxref=GenBank:WP_080203852.1;Name=WP_080203852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461463.2;locus_tag=C9E95_RS22345;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_080203852.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 36836 37699 . + . ID=gene-C9E95_RS22350;Name=C9E95_RS22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22350;old_locus_tag=C9E95_22910 NZ_PYJW01000190.1 Protein Homology CDS 36836 37699 . + 0 ID=cds-WP_080203851.1;Parent=gene-C9E95_RS22350;Dbxref=GenBank:WP_080203851.1;Name=WP_080203851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461462.1;locus_tag=C9E95_RS22350;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_080203851.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 37820 38251 . + . ID=gene-C9E95_RS22355;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=C9E95_RS22355;old_locus_tag=C9E95_22915 NZ_PYJW01000190.1 Protein Homology CDS 37820 38251 . + 0 ID=cds-WP_000963846.1;Parent=gene-C9E95_RS22355;Dbxref=GenBank:WP_000963846.1;Name=WP_000963846.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=C9E95_RS22355;product=nucleoside-diphosphate kinase;protein_id=WP_000963846.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 38458 39624 . + . ID=gene-C9E95_RS22360;Name=C9E95_RS22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22360;old_locus_tag=C9E95_22920 NZ_PYJW01000190.1 Protein Homology CDS 38458 39624 . + 0 ID=cds-WP_000003206.1;Parent=gene-C9E95_RS22360;Dbxref=GenBank:WP_000003206.1;Name=WP_000003206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461460.1;locus_tag=C9E95_RS22360;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_000003206.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 39916 40917 . + . ID=gene-C9E95_RS22365;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=C9E95_RS22365;old_locus_tag=C9E95_22930 NZ_PYJW01000190.1 Protein Homology CDS 39916 40917 . + 0 ID=cds-WP_080203850.1;Parent=gene-C9E95_RS22365;Dbxref=GenBank:WP_080203850.1;Name=WP_080203850.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461459.1;locus_tag=C9E95_RS22365;product=cytoskeleton protein RodZ;protein_id=WP_080203850.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 40944 42062 . + . ID=gene-C9E95_RS22370;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=C9E95_RS22370;old_locus_tag=C9E95_22935 NZ_PYJW01000190.1 Protein Homology CDS 40944 42062 . + 0 ID=cds-WP_000551804.1;Parent=gene-C9E95_RS22370;Dbxref=GenBank:WP_000551804.1;Name=WP_000551804.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461458.1;locus_tag=C9E95_RS22370;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_000551804.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 42173 43447 . + . ID=gene-C9E95_RS22375;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=C9E95_RS22375;old_locus_tag=C9E95_22940 NZ_PYJW01000190.1 Protein Homology CDS 42173 43447 . + 0 ID=cds-WP_001107146.1;Parent=gene-C9E95_RS22375;Dbxref=GenBank:WP_001107146.1;Name=WP_001107146.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461457.1;locus_tag=C9E95_RS22375;product=histidine--tRNA ligase;protein_id=WP_001107146.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 43461 44081 . + . ID=gene-C9E95_RS22380;Name=C9E95_RS22380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22380;old_locus_tag=C9E95_22945 NZ_PYJW01000190.1 Protein Homology CDS 43461 44081 . + 0 ID=cds-WP_000409190.1;Parent=gene-C9E95_RS22380;Dbxref=GenBank:WP_000409190.1;Name=WP_000409190.1;Ontology_term=GO:0005515,GO:0044877;gbkey=CDS;go_function=protein binding|0005515||IEA,protein-containing complex binding|0044877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461456.1;locus_tag=C9E95_RS22380;product=YfgM family protein;protein_id=WP_000409190.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 44092 45270 . + . ID=gene-C9E95_RS22385;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=C9E95_RS22385;old_locus_tag=C9E95_22950 NZ_PYJW01000190.1 Protein Homology CDS 44092 45270 . + 0 ID=cds-WP_001177072.1;Parent=gene-C9E95_RS22385;Dbxref=GenBank:WP_001177072.1;Name=WP_001177072.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461455.1;locus_tag=C9E95_RS22385;product=outer membrane protein assembly factor BamB;protein_id=WP_001177072.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 45389 46861 . + . ID=gene-C9E95_RS22390;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=C9E95_RS22390;old_locus_tag=C9E95_22955 NZ_PYJW01000190.1 Protein Homology CDS 45389 46861 . + 0 ID=cds-WP_000249411.1;Parent=gene-C9E95_RS22390;Dbxref=GenBank:WP_000249411.1;Name=WP_000249411.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=C9E95_RS22390;product=ribosome biogenesis GTPase Der;protein_id=WP_000249411.1;transl_table=11 NZ_PYJW01000190.1 RefSeq gene 46950 47171 . + . ID=gene-C9E95_RS22395;Name=C9E95_RS22395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22395;old_locus_tag=C9E95_22960 NZ_PYJW01000190.1 Protein Homology CDS 46950 47171 . + 0 ID=cds-WP_079950079.1;Parent=gene-C9E95_RS22395;Dbxref=GenBank:WP_079950079.1;Name=WP_079950079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461453.1;locus_tag=C9E95_RS22395;product=zinc ribbon domain-containing protein;protein_id=WP_079950079.1;transl_table=11 ##sequence-region NZ_PYJW01000111.1 1 44049 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000111.1 RefSeq region 1 44049 . + . ID=NZ_PYJW01000111.1:1..44049;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000111.1 RefSeq gene 47 1240 . + . ID=gene-C9E95_RS11670;Name=C9E95_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11670;old_locus_tag=C9E95_11970 NZ_PYJW01000111.1 Protein Homology CDS 47 1240 . + 0 ID=cds-WP_000975839.1;Parent=gene-C9E95_RS11670;Dbxref=GenBank:WP_000975839.1;Name=WP_000975839.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462733.1;locus_tag=C9E95_RS11670;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_000975839.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 1355 2251 . + . ID=gene-C9E95_RS11675;Name=C9E95_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11675;old_locus_tag=C9E95_11975 NZ_PYJW01000111.1 Protein Homology CDS 1355 2251 . + 0 ID=cds-WP_023993771.1;Parent=gene-C9E95_RS11675;Dbxref=GenBank:WP_023993771.1;Name=WP_023993771.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462734.1;locus_tag=C9E95_RS11675;product=LysR family transcriptional regulator;protein_id=WP_023993771.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 2270 4684 . - . ID=gene-C9E95_RS11680;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=C9E95_RS11680;old_locus_tag=C9E95_11980 NZ_PYJW01000111.1 Protein Homology CDS 2270 4684 . - 0 ID=cds-WP_000072047.1;Parent=gene-C9E95_RS11680;Dbxref=GenBank:WP_000072047.1;Name=WP_000072047.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=C9E95_RS11680;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_000072047.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 4713 5786 . - . ID=gene-C9E95_RS11685;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=C9E95_RS11685;old_locus_tag=C9E95_11985 NZ_PYJW01000111.1 Protein Homology CDS 4713 5786 . - 0 ID=cds-WP_000060081.1;Parent=gene-C9E95_RS11685;Dbxref=GenBank:WP_000060081.1;Name=WP_000060081.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=C9E95_RS11685;product=DNA replication/repair protein RecF;protein_id=WP_000060081.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 5934 7034 . - . ID=gene-C9E95_RS11690;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=C9E95_RS11690;old_locus_tag=C9E95_11990 NZ_PYJW01000111.1 Protein Homology CDS 5934 7034 . - 0 ID=cds-WP_000673474.1;Parent=gene-C9E95_RS11690;Dbxref=GenBank:WP_000673474.1;Name=WP_000673474.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=C9E95_RS11690;product=DNA polymerase III subunit beta;protein_id=WP_000673474.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 7039 8439 . - . ID=gene-C9E95_RS11695;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=C9E95_RS11695;old_locus_tag=C9E95_11995 NZ_PYJW01000111.1 Protein Homology CDS 7039 8439 . - 0 ID=cds-WP_000059093.1;Parent=gene-C9E95_RS11695;Dbxref=GenBank:WP_000059093.1;Name=WP_000059093.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462738.1;locus_tag=C9E95_RS11695;product=chromosomal replication initiator protein DnaA;protein_id=WP_000059093.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 8779 8871 . + . ID=gene-C9E95_RS23755;Name=C9E95_RS23755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23755 NZ_PYJW01000111.1 Protein Homology CDS 8779 8871 . + 0 ID=cds-WP_418142141.1;Parent=gene-C9E95_RS23755;Dbxref=GenBank:WP_418142141.1;Name=WP_418142141.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048187.1;locus_tag=C9E95_RS23755;product=hypothetical protein;protein_id=WP_418142141.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 9100 9240 . + . ID=gene-C9E95_RS11700;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=C9E95_RS11700;old_locus_tag=C9E95_12000 NZ_PYJW01000111.1 Protein Homology CDS 9100 9240 . + 0 ID=cds-WP_000831330.1;Parent=gene-C9E95_RS11700;Dbxref=GenBank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=C9E95_RS11700;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 9257 9616 . + . ID=gene-C9E95_RS11705;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=C9E95_RS11705;old_locus_tag=C9E95_12005 NZ_PYJW01000111.1 Protein Homology CDS 9257 9616 . + 0 ID=cds-WP_000239725.1;Parent=gene-C9E95_RS11705;Dbxref=GenBank:WP_000239725.1;Name=WP_000239725.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=C9E95_RS11705;product=ribonuclease P protein component;protein_id=WP_000239725.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 9580 9837 . + . ID=gene-C9E95_RS11710;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=C9E95_RS11710;old_locus_tag=C9E95_12010 NZ_PYJW01000111.1 Protein Homology CDS 9580 9837 . + 0 ID=cds-WP_001307474.1;Parent=gene-C9E95_RS11710;Dbxref=GenBank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=C9E95_RS11710;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 9840 11486 . + . ID=gene-C9E95_RS11715;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=C9E95_RS11715;old_locus_tag=C9E95_12015 NZ_PYJW01000111.1 Protein Homology CDS 9840 11486 . + 0 ID=cds-WP_000378283.1;Parent=gene-C9E95_RS11715;Dbxref=GenBank:WP_000378283.1;Name=WP_000378283.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=C9E95_RS11715;product=membrane protein insertase YidC;protein_id=WP_000378283.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 11627 12991 . + . ID=gene-C9E95_RS11720;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=C9E95_RS11720;old_locus_tag=C9E95_12020 NZ_PYJW01000111.1 Protein Homology CDS 11627 12991 . + 0 ID=cds-WP_000019079.1;Parent=gene-C9E95_RS11720;Dbxref=GenBank:WP_000019079.1;Name=WP_000019079.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=C9E95_RS11720;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_000019079.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 13247 14470 . + . ID=gene-C9E95_RS11725;Name=C9E95_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11725;old_locus_tag=C9E95_12025 NZ_PYJW01000111.1 Protein Homology CDS 13247 14470 . + 0 ID=cds-WP_080159409.1;Parent=gene-C9E95_RS11725;Dbxref=GenBank:WP_080159409.1;Name=WP_080159409.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218309.1;locus_tag=C9E95_RS11725;product=tyrosine-type recombinase/integrase;protein_id=WP_080159409.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 14555 15118 . - . ID=gene-C9E95_RS11730;Name=C9E95_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11730;old_locus_tag=C9E95_12030 NZ_PYJW01000111.1 Protein Homology CDS 14555 15118 . - 0 ID=cds-WP_061378616.1;Parent=gene-C9E95_RS11730;Dbxref=GenBank:WP_061378616.1;Name=WP_061378616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959180.1;locus_tag=C9E95_RS11730;product=hypothetical protein;protein_id=WP_061378616.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 15363 15773 . - . ID=gene-C9E95_RS11735;Name=C9E95_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11735;old_locus_tag=C9E95_12035 NZ_PYJW01000111.1 Protein Homology CDS 15363 15773 . - 0 ID=cds-WP_080203977.1;Parent=gene-C9E95_RS11735;Dbxref=GenBank:WP_080203977.1;Name=WP_080203977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000896275.1;locus_tag=C9E95_RS11735;product=hypothetical protein;protein_id=WP_080203977.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 16962 18149 . + . ID=gene-C9E95_RS11740;Name=C9E95_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11740;old_locus_tag=C9E95_12045 NZ_PYJW01000111.1 Protein Homology CDS 16962 18149 . + 0 ID=cds-WP_079986922.1;Parent=gene-C9E95_RS11740;Dbxref=GenBank:WP_079986922.1;Name=WP_079986922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608974.1;locus_tag=C9E95_RS11740;product=MFS transporter;protein_id=WP_079986922.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 18118 19077 . + . ID=gene-C9E95_RS11745;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=C9E95_RS11745;old_locus_tag=C9E95_12050 NZ_PYJW01000111.1 Protein Homology CDS 18118 19077 . + 0 ID=cds-WP_000749365.1;Parent=gene-C9E95_RS11745;Dbxref=GenBank:WP_000749365.1;Name=WP_000749365.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=C9E95_RS11745;product=HTH-type transcriptional regulator YidZ;protein_id=WP_000749365.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 19235 19990 . + . ID=gene-C9E95_RS11750;Name=C9E95_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11750;old_locus_tag=C9E95_12055 NZ_PYJW01000111.1 Protein Homology CDS 19235 19990 . + 0 ID=cds-WP_000190678.1;Parent=gene-C9E95_RS11750;Dbxref=GenBank:WP_000190678.1;Name=WP_000190678.1;Ontology_term=GO:0008897;gbkey=CDS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462748.1;locus_tag=C9E95_RS11750;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_000190678.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 19990 20574 . + . ID=gene-C9E95_RS11755;Name=C9E95_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11755;old_locus_tag=C9E95_12060 NZ_PYJW01000111.1 Protein Homology CDS 19990 20574 . + 0 ID=cds-WP_079986924.1;Parent=gene-C9E95_RS11755;Dbxref=GenBank:WP_079986924.1;Name=WP_079986924.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462749.3;locus_tag=C9E95_RS11755;product=NADPH-dependent FMN reductase;protein_id=WP_079986924.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 20619 21956 . - . ID=gene-C9E95_RS11760;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=C9E95_RS11760;old_locus_tag=C9E95_12065 NZ_PYJW01000111.1 Protein Homology CDS 20619 21956 . - 0 ID=cds-WP_001519317.1;Parent=gene-C9E95_RS11760;Dbxref=GenBank:WP_001519317.1;Name=WP_001519317.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=C9E95_RS11760;product=adenine permease AdeP;protein_id=WP_001519317.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 22125 22790 . + . ID=gene-C9E95_RS11765;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=C9E95_RS11765;old_locus_tag=C9E95_12070 NZ_PYJW01000111.1 Protein Homology CDS 22125 22790 . + 0 ID=cds-WP_080203978.1;Parent=gene-C9E95_RS11765;Dbxref=GenBank:WP_080203978.1;Name=WP_080203978.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462751.1;locus_tag=C9E95_RS11765;product=6-phosphogluconate phosphatase;protein_id=WP_080203978.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 22885 23610 . - . ID=gene-C9E95_RS11770;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=C9E95_RS11770;old_locus_tag=C9E95_12075 NZ_PYJW01000111.1 Protein Homology CDS 22885 23610 . - 0 ID=cds-WP_000377800.1;Parent=gene-C9E95_RS11770;Dbxref=GenBank:WP_000377800.1;Name=WP_000377800.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462752.1;locus_tag=C9E95_RS11770;product=phosphate signaling complex protein PhoU;protein_id=WP_000377800.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 23625 24398 . - . ID=gene-C9E95_RS11775;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=C9E95_RS11775;old_locus_tag=C9E95_12080 NZ_PYJW01000111.1 Protein Homology CDS 23625 24398 . - 0 ID=cds-WP_000063118.1;Parent=gene-C9E95_RS11775;Dbxref=GenBank:WP_000063118.1;Name=WP_000063118.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=C9E95_RS11775;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000063118.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 24485 25375 . - . ID=gene-C9E95_RS11780;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=C9E95_RS11780;old_locus_tag=C9E95_12085 NZ_PYJW01000111.1 Protein Homology CDS 24485 25375 . - 0 ID=cds-WP_000212197.1;Parent=gene-C9E95_RS11780;Dbxref=GenBank:WP_000212197.1;Name=WP_000212197.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462754.1;locus_tag=C9E95_RS11780;product=phosphate ABC transporter permease PstA;protein_id=WP_000212197.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 25375 26334 . - . ID=gene-C9E95_RS11785;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=C9E95_RS11785;old_locus_tag=C9E95_12090 NZ_PYJW01000111.1 Protein Homology CDS 25375 26334 . - 0 ID=cds-WP_000741630.1;Parent=gene-C9E95_RS11785;Dbxref=GenBank:WP_000741630.1;Name=WP_000741630.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=C9E95_RS11785;product=phosphate ABC transporter permease PstC;protein_id=WP_000741630.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 26470 27510 . - . ID=gene-C9E95_RS11790;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=C9E95_RS11790;old_locus_tag=C9E95_12095 NZ_PYJW01000111.1 Protein Homology CDS 26470 27510 . - 0 ID=cds-WP_000867131.1;Parent=gene-C9E95_RS11790;Dbxref=GenBank:WP_000867131.1;Name=WP_000867131.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=C9E95_RS11790;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_000867131.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 27677 29050 . - . ID=gene-C9E95_RS11795;Name=C9E95_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11795;old_locus_tag=C9E95_12100 NZ_PYJW01000111.1 Protein Homology CDS 27677 29050 . - 0 ID=cds-WP_080203979.1;Parent=gene-C9E95_RS11795;Dbxref=GenBank:WP_080203979.1;Name=WP_080203979.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462757.1;locus_tag=C9E95_RS11795;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_080203979.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 29099 29917 . - . ID=gene-C9E95_RS11800;Name=C9E95_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11800;old_locus_tag=C9E95_12105 NZ_PYJW01000111.1 Protein Homology CDS 29099 29917 . - 0 ID=cds-WP_000166709.1;Parent=gene-C9E95_RS11800;Dbxref=GenBank:WP_000166709.1;Name=WP_000166709.1;Ontology_term=GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462758.1;locus_tag=C9E95_RS11800;product=shikimate 5-dehydrogenase;protein_id=WP_000166709.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 30012 31769 . + . ID=gene-C9E95_RS11805;Name=C9E95_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11805;old_locus_tag=C9E95_12110 NZ_PYJW01000111.1 Protein Homology CDS 30012 31769 . + 0 ID=cds-WP_023214828.1;Parent=gene-C9E95_RS11805;Dbxref=GenBank:WP_023214828.1;Name=WP_023214828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462759.1;locus_tag=C9E95_RS11805;product=SgrR family transcriptional regulator;protein_id=WP_023214828.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 31920 33749 . - . ID=gene-C9E95_RS11810;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=C9E95_RS11810;old_locus_tag=C9E95_12115 NZ_PYJW01000111.1 Protein Homology CDS 31920 33749 . - 0 ID=cds-WP_000334073.1;Parent=gene-C9E95_RS11810;Dbxref=GenBank:WP_000334073.1;Name=WP_000334073.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=C9E95_RS11810;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_000334073.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 33938 35308 . - . ID=gene-C9E95_RS11815;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=C9E95_RS11815;old_locus_tag=C9E95_12120 NZ_PYJW01000111.1 Protein Homology CDS 33938 35308 . - 0 ID=cds-WP_000934851.1;Parent=gene-C9E95_RS11815;Dbxref=GenBank:WP_000934851.1;Name=WP_000934851.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462761.1;locus_tag=C9E95_RS11815;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_000934851.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 35628 36326 . - . ID=gene-C9E95_RS11825;Name=C9E95_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11825;old_locus_tag=C9E95_12130 NZ_PYJW01000111.1 Protein Homology CDS 35628 36326 . - 0 ID=cds-WP_000009908.1;Parent=gene-C9E95_RS11825;Dbxref=GenBank:WP_000009908.1;Name=WP_000009908.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462762.1;locus_tag=C9E95_RS11825;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000009908.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 36552 36971 . - . ID=gene-C9E95_RS11830;Name=C9E95_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11830;old_locus_tag=C9E95_12135 NZ_PYJW01000111.1 Protein Homology CDS 36552 36971 . - 0 ID=cds-WP_001251971.1;Parent=gene-C9E95_RS11830;Dbxref=GenBank:WP_001251971.1;Name=WP_001251971.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=C9E95_RS11830;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251971.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 36992 38374 . - . ID=gene-C9E95_RS11835;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=C9E95_RS11835;old_locus_tag=C9E95_12140 NZ_PYJW01000111.1 Protein Homology CDS 36992 38374 . - 0 ID=cds-WP_000190499.1;Parent=gene-C9E95_RS11835;Dbxref=GenBank:WP_000190499.1;Name=WP_000190499.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=C9E95_RS11835;product=F0F1 ATP synthase subunit beta;protein_id=WP_000190499.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 38401 39264 . - . ID=gene-C9E95_RS11840;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=C9E95_RS11840;old_locus_tag=C9E95_12145 NZ_PYJW01000111.1 Protein Homology CDS 38401 39264 . - 0 ID=cds-WP_000896506.1;Parent=gene-C9E95_RS11840;Dbxref=GenBank:WP_000896506.1;Name=WP_000896506.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=C9E95_RS11840;product=F0F1 ATP synthase subunit gamma;protein_id=WP_000896506.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 39315 40856 . - . ID=gene-C9E95_RS11845;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=C9E95_RS11845;old_locus_tag=C9E95_12150 NZ_PYJW01000111.1 Protein Homology CDS 39315 40856 . - 0 ID=cds-WP_001176751.1;Parent=gene-C9E95_RS11845;Dbxref=GenBank:WP_001176751.1;Name=WP_001176751.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=C9E95_RS11845;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001176751.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 40869 41402 . - . ID=gene-C9E95_RS11850;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=C9E95_RS11850;old_locus_tag=C9E95_12155 NZ_PYJW01000111.1 Protein Homology CDS 40869 41402 . - 0 ID=cds-WP_001288957.1;Parent=gene-C9E95_RS11850;Dbxref=GenBank:WP_001288957.1;Name=WP_001288957.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=C9E95_RS11850;product=F0F1 ATP synthase subunit delta;protein_id=WP_001288957.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 41417 41887 . - . ID=gene-C9E95_RS11855;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=C9E95_RS11855;old_locus_tag=C9E95_12160 NZ_PYJW01000111.1 Protein Homology CDS 41417 41887 . - 0 ID=cds-WP_001052212.1;Parent=gene-C9E95_RS11855;Dbxref=GenBank:WP_001052212.1;Name=WP_001052212.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=C9E95_RS11855;product=F0F1 ATP synthase subunit B;protein_id=WP_001052212.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 41947 42186 . - . ID=gene-C9E95_RS11860;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=C9E95_RS11860;old_locus_tag=C9E95_12165 NZ_PYJW01000111.1 Protein Homology CDS 41947 42186 . - 0 ID=cds-WP_000429386.1;Parent=gene-C9E95_RS11860;Dbxref=GenBank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=C9E95_RS11860;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 42233 43048 . - . ID=gene-C9E95_RS11865;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=C9E95_RS11865;old_locus_tag=C9E95_12170 NZ_PYJW01000111.1 Protein Homology CDS 42233 43048 . - 0 ID=cds-WP_000135632.1;Parent=gene-C9E95_RS11865;Dbxref=GenBank:WP_000135632.1;Name=WP_000135632.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=C9E95_RS11865;product=F0F1 ATP synthase subunit A;protein_id=WP_000135632.1;transl_table=11 NZ_PYJW01000111.1 RefSeq gene 43057 43437 . - . ID=gene-C9E95_RS11870;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=C9E95_RS11870;old_locus_tag=C9E95_12175 NZ_PYJW01000111.1 Protein Homology CDS 43057 43437 . - 0 ID=cds-WP_000116685.1;Parent=gene-C9E95_RS11870;Dbxref=GenBank:WP_000116685.1;Name=WP_000116685.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462771.1;locus_tag=C9E95_RS11870;product=F0F1 ATP synthase subunit I;protein_id=WP_000116685.1;transl_table=11 ##sequence-region NZ_PYJW01000002.1 1 662 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000002.1 RefSeq region 1 662 . + . ID=NZ_PYJW01000002.1:1..662;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000002.1 RefSeq gene 1 540 . - . ID=gene-C9E95_RS00010;Name=C9E95_RS00010;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9E95_RS00010;old_locus_tag=C9E95_00010;partial=true;start_range=.,1 NZ_PYJW01000002.1 cmsearch rRNA 1 540 . - . ID=rna-C9E95_RS00010;Parent=gene-C9E95_RS00010;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS00010;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_PYJW01000002.1 cmsearch exon 1 540 . - . ID=exon-C9E95_RS00010-1;Parent=rna-C9E95_RS00010;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS00010;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_PYJW01000062.1 1 43984 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000062.1 RefSeq region 1 43984 . + . ID=NZ_PYJW01000062.1:1..43984;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000062.1 RefSeq gene 139 1335 . - . ID=gene-C9E95_RS06295;Name=C9E95_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06295;old_locus_tag=C9E95_06455 NZ_PYJW01000062.1 Protein Homology CDS 139 1335 . - 0 ID=cds-WP_001604633.1;Parent=gene-C9E95_RS06295;Dbxref=GenBank:WP_001604633.1;Name=WP_001604633.1;Ontology_term=GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001604633.1;locus_tag=C9E95_RS06295;product=integrase domain-containing protein;protein_id=WP_001604633.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 1520 1882 . - . ID=gene-C9E95_RS06300;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=C9E95_RS06300;old_locus_tag=C9E95_06460 NZ_PYJW01000062.1 cmsearch tmRNA 1520 1882 . - . ID=rna-C9E95_RS06300;Parent=gene-C9E95_RS06300;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS06300;product=transfer-messenger RNA NZ_PYJW01000062.1 cmsearch exon 1520 1882 . - . ID=exon-C9E95_RS06300-1;Parent=rna-C9E95_RS06300;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS06300;product=transfer-messenger RNA NZ_PYJW01000062.1 RefSeq gene 1954 3117 . - . ID=gene-C9E95_RS06305;Name=C9E95_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06305;old_locus_tag=C9E95_06465 NZ_PYJW01000062.1 Protein Homology CDS 1954 3117 . - 0 ID=cds-WP_072095627.1;Parent=gene-C9E95_RS06305;Dbxref=GenBank:WP_072095627.1;Name=WP_072095627.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461621.1;locus_tag=C9E95_RS06305;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_072095627.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 3125 5305 . - . ID=gene-C9E95_RS06310;Name=C9E95_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06310;old_locus_tag=C9E95_06470 NZ_PYJW01000062.1 Protein Homology CDS 3125 5305 . - 0 ID=cds-WP_039585603.1;Parent=gene-C9E95_RS06310;Dbxref=GenBank:WP_039585603.1;Name=WP_039585603.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461620.1;locus_tag=C9E95_RS06310;product=type I secretion system permease/ATPase;protein_id=WP_039585603.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 5302 6711 . - . ID=gene-C9E95_RS06315;Name=C9E95_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06315;old_locus_tag=C9E95_06475 NZ_PYJW01000062.1 Protein Homology CDS 5302 6711 . - 0 ID=cds-WP_023993986.1;Parent=gene-C9E95_RS06315;Dbxref=GenBank:WP_023993986.1;Name=WP_023993986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461619.1;locus_tag=C9E95_RS06315;product=TolC family outer membrane protein;protein_id=WP_023993986.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 6776 18250 . - . ID=gene-C9E95_RS06320;Name=bapA;gbkey=Gene;gene=bapA;gene_biotype=protein_coding;locus_tag=C9E95_RS06320;old_locus_tag=C9E95_06480 NZ_PYJW01000062.1 Protein Homology CDS 6776 18250 . - 0 ID=cds-WP_080204054.1;Parent=gene-C9E95_RS06320;Dbxref=GenBank:WP_080204054.1;Name=WP_080204054.1;gbkey=CDS;gene=bapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237670.1;locus_tag=C9E95_RS06320;product=biofilm-associated protein BapA;protein_id=WP_080204054.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 18868 19350 . - . ID=gene-C9E95_RS06325;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=C9E95_RS06325;old_locus_tag=C9E95_06485 NZ_PYJW01000062.1 Protein Homology CDS 18868 19350 . - 0 ID=cds-WP_001518569.1;Parent=gene-C9E95_RS06325;Dbxref=GenBank:WP_001518569.1;Name=WP_001518569.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461618.1;locus_tag=C9E95_RS06325;product=SsrA-binding protein SmpB;protein_id=WP_001518569.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 19539 19976 . + . ID=gene-C9E95_RS06330;Name=C9E95_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06330;old_locus_tag=C9E95_06490 NZ_PYJW01000062.1 Protein Homology CDS 19539 19976 . + 0 ID=cds-WP_001537508.1;Parent=gene-C9E95_RS06330;Dbxref=GenBank:WP_001537508.1;Name=WP_001537508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543334.1;locus_tag=C9E95_RS06330;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_001537508.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 19966 20256 . + . ID=gene-C9E95_RS06335;Name=C9E95_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06335;old_locus_tag=C9E95_06495 NZ_PYJW01000062.1 Protein Homology CDS 19966 20256 . + 0 ID=cds-WP_001112990.1;Parent=gene-C9E95_RS06335;Dbxref=GenBank:WP_001112990.1;Name=WP_001112990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461616.1;locus_tag=C9E95_RS06335;product=RnfH family protein;protein_id=WP_001112990.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 20422 20760 . - . ID=gene-C9E95_RS06340;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=C9E95_RS06340;old_locus_tag=C9E95_06500 NZ_PYJW01000062.1 Protein Homology CDS 20422 20760 . - 0 ID=cds-WP_001203445.1;Parent=gene-C9E95_RS06340;Dbxref=GenBank:WP_001203445.1;Name=WP_001203445.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461615.1;locus_tag=C9E95_RS06340;product=outer membrane protein assembly factor BamE;protein_id=WP_001203445.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 20909 22570 . - . ID=gene-C9E95_RS06345;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=C9E95_RS06345;old_locus_tag=C9E95_06505 NZ_PYJW01000062.1 Protein Homology CDS 20909 22570 . - 0 ID=cds-WP_080204055.1;Parent=gene-C9E95_RS06345;Dbxref=GenBank:WP_080204055.1;Name=WP_080204055.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461614.1;locus_tag=C9E95_RS06345;product=DNA repair protein RecN;protein_id=WP_080204055.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 22656 23534 . - . ID=gene-C9E95_RS06350;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=C9E95_RS06350;old_locus_tag=C9E95_06510 NZ_PYJW01000062.1 Protein Homology CDS 22656 23534 . - 0 ID=cds-WP_001059155.1;Parent=gene-C9E95_RS06350;Dbxref=GenBank:WP_001059155.1;Name=WP_001059155.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=C9E95_RS06350;product=NAD(+) kinase;protein_id=WP_001059155.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 23658 24248 . + . ID=gene-C9E95_RS06360;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=C9E95_RS06360;old_locus_tag=C9E95_06520 NZ_PYJW01000062.1 Protein Homology CDS 23658 24248 . + 0 ID=cds-WP_001518875.1;Parent=gene-C9E95_RS06360;Dbxref=GenBank:WP_001518875.1;Name=WP_001518875.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461611.1;locus_tag=C9E95_RS06360;product=nucleotide exchange factor GrpE;protein_id=WP_001518875.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 24283 24888 . - . ID=gene-C9E95_RS06365;Name=C9E95_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06365;old_locus_tag=C9E95_06525 NZ_PYJW01000062.1 Protein Homology CDS 24283 24888 . - 0 ID=cds-WP_001287923.1;Parent=gene-C9E95_RS06365;Dbxref=GenBank:WP_001287923.1;Name=WP_001287923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461610.1;locus_tag=C9E95_RS06365;product=DUF6630 family protein;protein_id=WP_001287923.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 25009 26295 . - . ID=gene-C9E95_RS06370;Name=C9E95_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06370;old_locus_tag=C9E95_06530 NZ_PYJW01000062.1 Protein Homology CDS 25009 26295 . - 0 ID=cds-WP_127172650.1;Parent=gene-C9E95_RS06370;Dbxref=GenBank:WP_127172650.1;Name=WP_127172650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=C9E95_RS06370;product=HlyC/CorC family transporter;protein_id=WP_127172650.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 26315 27106 . - . ID=gene-C9E95_RS06375;Name=C9E95_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06375;old_locus_tag=C9E95_06535 NZ_PYJW01000062.1 Protein Homology CDS 26315 27106 . - 0 ID=cds-WP_001537507.1;Parent=gene-C9E95_RS06375;Dbxref=GenBank:WP_001537507.1;Name=WP_001537507.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461608.1;locus_tag=C9E95_RS06375;product=cytochrome C assembly family protein;protein_id=WP_001537507.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 27272 28633 . + . ID=gene-C9E95_RS06385;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=C9E95_RS06385;old_locus_tag=C9E95_06545 NZ_PYJW01000062.1 Protein Homology CDS 27272 28633 . + 0 ID=cds-WP_000460052.1;Parent=gene-C9E95_RS06385;Dbxref=GenBank:WP_000460052.1;Name=WP_000460052.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=C9E95_RS06385;product=signal recognition particle protein;protein_id=WP_000460052.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 28886 29134 . + . ID=gene-C9E95_RS06390;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=C9E95_RS06390;old_locus_tag=C9E95_06550 NZ_PYJW01000062.1 Protein Homology CDS 28886 29134 . + 0 ID=cds-WP_000256453.1;Parent=gene-C9E95_RS06390;Dbxref=GenBank:WP_000256453.1;Name=WP_000256453.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=C9E95_RS06390;product=30S ribosomal protein S16;protein_id=WP_000256453.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 29153 29701 . + . ID=gene-C9E95_RS06395;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=C9E95_RS06395;old_locus_tag=C9E95_06555 NZ_PYJW01000062.1 Protein Homology CDS 29153 29701 . + 0 ID=cds-WP_000043266.1;Parent=gene-C9E95_RS06395;Dbxref=GenBank:WP_000043266.1;Name=WP_000043266.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=C9E95_RS06395;product=ribosome maturation factor RimM;protein_id=WP_000043266.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 29746 30513 . + . ID=gene-C9E95_RS06400;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=C9E95_RS06400;old_locus_tag=C9E95_06560 NZ_PYJW01000062.1 Protein Homology CDS 29746 30513 . + 0 ID=cds-WP_000469807.1;Parent=gene-C9E95_RS06400;Dbxref=GenBank:WP_000469807.1;Name=WP_000469807.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461604.1;locus_tag=C9E95_RS06400;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000469807.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 30554 30901 . + . ID=gene-C9E95_RS06405;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=C9E95_RS06405;old_locus_tag=C9E95_06565 NZ_PYJW01000062.1 Protein Homology CDS 30554 30901 . + 0 ID=cds-WP_000065257.1;Parent=gene-C9E95_RS06405;Dbxref=GenBank:WP_000065257.1;Name=WP_000065257.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=C9E95_RS06405;product=50S ribosomal protein L19;protein_id=WP_000065257.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 31057 32277 . - . ID=gene-C9E95_RS06410;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=C9E95_RS06410;old_locus_tag=C9E95_06570 NZ_PYJW01000062.1 Protein Homology CDS 31057 32277 . - 0 ID=cds-WP_001030989.1;Parent=gene-C9E95_RS06410;Dbxref=GenBank:WP_001030989.1;Name=WP_001030989.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461602.1;locus_tag=C9E95_RS06410;product=diguanylate cyclase DgcN;protein_id=WP_001030989.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 32270 32788 . - . ID=gene-C9E95_RS06415;Name=C9E95_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06415;old_locus_tag=C9E95_06575 NZ_PYJW01000062.1 Protein Homology CDS 32270 32788 . - 0 ID=cds-WP_079827262.1;Parent=gene-C9E95_RS06415;Dbxref=GenBank:WP_079827262.1;Name=WP_079827262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461601.1;locus_tag=C9E95_RS06415;product=YfiR family protein;protein_id=WP_079827262.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 33228 34298 . + . ID=gene-C9E95_RS06420;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=C9E95_RS06420;old_locus_tag=C9E95_06580 NZ_PYJW01000062.1 Protein Homology CDS 33228 34298 . + 0 ID=cds-WP_001168062.1;Parent=gene-C9E95_RS06420;Dbxref=GenBank:WP_001168062.1;Name=WP_001168062.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461600.1;locus_tag=C9E95_RS06420;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_001168062.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 34308 35429 . + . ID=gene-C9E95_RS06425;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=C9E95_RS06425;old_locus_tag=C9E95_06585 NZ_PYJW01000062.1 Protein Homology CDS 34308 35429 . + 0 ID=cds-WP_058344343.1;Parent=gene-C9E95_RS06425;Dbxref=GenBank:WP_058344343.1;Name=WP_058344343.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461599.1;locus_tag=C9E95_RS06425;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_058344343.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 35487 36395 . + . ID=gene-C9E95_RS06430;Name=C9E95_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06430;old_locus_tag=C9E95_06590 NZ_PYJW01000062.1 Protein Homology CDS 35487 36395 . + 0 ID=cds-WP_080182478.1;Parent=gene-C9E95_RS06430;Dbxref=GenBank:WP_080182478.1;Name=WP_080182478.1;Ontology_term=GO:0005509,GO:0016787,GO:0046872;gbkey=CDS;go_function=calcium ion binding|0005509||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461598.1;locus_tag=C9E95_RS06430;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_080182478.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 36356 37516 . - . ID=gene-C9E95_RS06435;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=C9E95_RS06435;old_locus_tag=C9E95_06595 NZ_PYJW01000062.1 Protein Homology CDS 36356 37516 . - 0 ID=cds-WP_000200080.1;Parent=gene-C9E95_RS06435;Dbxref=GenBank:WP_000200080.1;Name=WP_000200080.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461597.1;locus_tag=C9E95_RS06435;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_000200080.1;transl_table=11 NZ_PYJW01000062.1 cmsearch sequence_feature 37539 37664 . - . ID=id-NZ_PYJW01000062.1:37539..37664;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_PYJW01000062.1 RefSeq gene 37616 37663 . - . ID=gene-C9E95_RS06440;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=C9E95_RS06440;old_locus_tag=C9E95_06600 NZ_PYJW01000062.1 Protein Homology CDS 37616 37663 . - 0 ID=cds-WP_010989056.1;Parent=gene-C9E95_RS06440;Dbxref=GenBank:WP_010989056.1;Name=WP_010989056.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449055.1;locus_tag=C9E95_RS06440;product=pheA operon leader peptide PheL;protein_id=WP_010989056.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 37767 38105 . - . ID=gene-C9E95_RS06445;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=C9E95_RS06445;old_locus_tag=C9E95_06605 NZ_PYJW01000062.1 Protein Homology CDS 37767 38105 . - 0 ID=cds-WP_000178449.1;Parent=gene-C9E95_RS06445;Dbxref=GenBank:WP_000178449.1;Name=WP_000178449.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461595.1;locus_tag=C9E95_RS06445;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_000178449.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 38377 39114 . - . ID=gene-C9E95_RS06455;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=C9E95_RS06455;old_locus_tag=C9E95_06610 NZ_PYJW01000062.1 Protein Homology CDS 38377 39114 . - 0 ID=cds-WP_000197660.1;Parent=gene-C9E95_RS06455;Dbxref=GenBank:WP_000197660.1;Name=WP_000197660.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461594.1;locus_tag=C9E95_RS06455;product=outer membrane protein assembly factor BamD;protein_id=WP_000197660.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 39246 40226 . + . ID=gene-C9E95_RS06460;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=C9E95_RS06460;old_locus_tag=C9E95_06615 NZ_PYJW01000062.1 Protein Homology CDS 39246 40226 . + 0 ID=cds-WP_000079130.1;Parent=gene-C9E95_RS06460;Dbxref=GenBank:WP_000079130.1;Name=WP_000079130.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=C9E95_RS06460;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_000079130.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 40223 40954 . + . ID=gene-C9E95_RS06465;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=C9E95_RS06465;old_locus_tag=C9E95_06620 NZ_PYJW01000062.1 Protein Homology CDS 40223 40954 . + 0 ID=cds-WP_000992633.1;Parent=gene-C9E95_RS06465;Dbxref=GenBank:WP_000992633.1;Name=WP_000992633.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461592.1;locus_tag=C9E95_RS06465;product=purine nucleoside phosphorylase YfiH;protein_id=WP_000992633.1;transl_table=11 NZ_PYJW01000062.1 RefSeq gene 41084 43657 . + . ID=gene-C9E95_RS06470;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=C9E95_RS06470;old_locus_tag=C9E95_06625 NZ_PYJW01000062.1 Protein Homology CDS 41084 43657 . + 0 ID=cds-WP_001235092.1;Parent=gene-C9E95_RS06470;Dbxref=GenBank:WP_001235092.1;Name=WP_001235092.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=C9E95_RS06470;product=ATP-dependent chaperone ClpB;protein_id=WP_001235092.1;transl_table=11 ##sequence-region NZ_PYJW01000123.1 1 43693 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000123.1 RefSeq region 1 43693 . + . ID=NZ_PYJW01000123.1:1..43693;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000123.1 RefSeq gene 443 652 . - . ID=gene-C9E95_RS13210;Name=C9E95_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13210;old_locus_tag=C9E95_13545 NZ_PYJW01000123.1 Protein Homology CDS 443 652 . - 0 ID=cds-WP_000981672.1;Parent=gene-C9E95_RS13210;Dbxref=GenBank:WP_000981672.1;Name=WP_000981672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000230236.1;locus_tag=C9E95_RS13210;product=hypothetical protein;protein_id=WP_000981672.1;transl_table=11 NZ_PYJW01000123.1 RefSeq pseudogene 888 1262 . - . ID=gene-C9E95_RS13215;Name=C9E95_RS13215;end_range=1262,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS13215;old_locus_tag=C9E95_13550;partial=true;pseudo=true NZ_PYJW01000123.1 Protein Homology CDS 888 1262 . - 0 ID=cds-C9E95_RS13215;Parent=gene-C9E95_RS13215;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1262,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635961.1;locus_tag=C9E95_RS13215;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_PYJW01000123.1 RefSeq pseudogene 1266 1490 . + . ID=gene-C9E95_RS13220;Name=C9E95_RS13220;end_range=1490,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS13220;old_locus_tag=C9E95_13555;partial=true;pseudo=true;start_range=.,1266 NZ_PYJW01000123.1 Protein Homology CDS 1266 1490 . + 0 ID=cds-C9E95_RS13220;Parent=gene-C9E95_RS13220;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=1490,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415107.1;locus_tag=C9E95_RS13220;partial=true;product=efflux RND transporter permease subunit;pseudo=true;start_range=.,1266;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 1508 2362 . - . ID=gene-C9E95_RS13225;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=C9E95_RS13225;old_locus_tag=C9E95_13560 NZ_PYJW01000123.1 Protein Homology CDS 1508 2362 . - 0 ID=cds-WP_023182280.1;Parent=gene-C9E95_RS13225;Dbxref=GenBank:WP_023182280.1;Name=WP_023182280.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459555.1;locus_tag=C9E95_RS13225;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WP_023182280.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 2578 3903 . + . ID=gene-C9E95_RS13230;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=C9E95_RS13230;old_locus_tag=C9E95_13565 NZ_PYJW01000123.1 Protein Homology CDS 2578 3903 . + 0 ID=cds-WP_023993242.1;Parent=gene-C9E95_RS13230;Dbxref=GenBank:WP_023993242.1;Name=WP_023993242.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459556.1;locus_tag=C9E95_RS13230;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WP_023993242.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 4060 4296 . + . ID=gene-C9E95_RS13235;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=C9E95_RS13235;old_locus_tag=C9E95_13570 NZ_PYJW01000123.1 Protein Homology CDS 4060 4296 . + 0 ID=cds-WP_000922168.1;Parent=gene-C9E95_RS13235;Dbxref=GenBank:WP_000922168.1;Name=WP_000922168.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459557.1;locus_tag=C9E95_RS13235;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WP_000922168.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 4309 4869 . + . ID=gene-C9E95_RS13240;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=C9E95_RS13240;old_locus_tag=C9E95_13575 NZ_PYJW01000123.1 Protein Homology CDS 4309 4869 . + 0 ID=cds-WP_000362177.1;Parent=gene-C9E95_RS13240;Dbxref=GenBank:WP_000362177.1;Name=WP_000362177.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459558.1;locus_tag=C9E95_RS13240;product=reactive chlorine resistance membrane protein RclC;protein_id=WP_000362177.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 4948 6123 . - . ID=gene-C9E95_RS13245;Name=C9E95_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13245;old_locus_tag=C9E95_13580 NZ_PYJW01000123.1 Protein Homology CDS 4948 6123 . - 0 ID=cds-WP_001033453.1;Parent=gene-C9E95_RS13245;Dbxref=GenBank:WP_001033453.1;Name=WP_001033453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=C9E95_RS13245;product=DnaJ family molecular chaperone;protein_id=WP_001033453.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 6448 7842 . + . ID=gene-C9E95_RS13250;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=C9E95_RS13250;old_locus_tag=C9E95_13585 NZ_PYJW01000123.1 Protein Homology CDS 6448 7842 . + 0 ID=cds-WP_023993241.1;Parent=gene-C9E95_RS13250;Dbxref=GenBank:WP_023993241.1;Name=WP_023993241.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459560.1;locus_tag=C9E95_RS13250;product=phenylalanine transporter;protein_id=WP_023993241.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 7884 9131 . - . ID=gene-C9E95_RS13255;Name=C9E95_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13255;old_locus_tag=C9E95_13590 NZ_PYJW01000123.1 Protein Homology CDS 7884 9131 . - 0 ID=cds-WP_001156978.1;Parent=gene-C9E95_RS13255;Dbxref=GenBank:WP_001156978.1;Name=WP_001156978.1;Ontology_term=GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459561.1;locus_tag=C9E95_RS13255;product=mechanosensitive ion channel family protein;protein_id=WP_001156978.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 9442 11412 . + . ID=gene-C9E95_RS13260;Name=C9E95_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13260;old_locus_tag=C9E95_13600 NZ_PYJW01000123.1 Protein Homology CDS 9442 11412 . + 0 ID=cds-WP_080203781.1;Parent=gene-C9E95_RS13260;Dbxref=GenBank:WP_080203781.1;Name=WP_080203781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459562.1;locus_tag=C9E95_RS13260;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_080203781.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 11679 12332 . - . ID=gene-C9E95_RS13265;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=C9E95_RS13265;old_locus_tag=C9E95_13605 NZ_PYJW01000123.1 Protein Homology CDS 11679 12332 . - 0 ID=cds-WP_000355879.1;Parent=gene-C9E95_RS13265;Dbxref=GenBank:WP_000355879.1;Name=WP_000355879.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459570.1;locus_tag=C9E95_RS13265;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_000355879.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 12429 12797 . - . ID=gene-C9E95_RS13270;Name=C9E95_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13270;old_locus_tag=C9E95_13610 NZ_PYJW01000123.1 Protein Homology CDS 12429 12797 . - 0 ID=cds-WP_000348999.1;Parent=gene-C9E95_RS13270;Dbxref=GenBank:WP_000348999.1;Name=WP_000348999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459571.1;locus_tag=C9E95_RS13270;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000348999.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 12797 13378 . - . ID=gene-C9E95_RS13275;Name=C9E95_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13275;old_locus_tag=C9E95_13615 NZ_PYJW01000123.1 Protein Homology CDS 12797 13378 . - 0 ID=cds-WP_000113609.1;Parent=gene-C9E95_RS13275;Dbxref=GenBank:WP_000113609.1;Name=WP_000113609.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459572.1;locus_tag=C9E95_RS13275;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000113609.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 13667 14008 . + . ID=gene-C9E95_RS13280;Name=C9E95_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13280;old_locus_tag=C9E95_13620 NZ_PYJW01000123.1 Protein Homology CDS 13667 14008 . + 0 ID=cds-WP_000155631.1;Parent=gene-C9E95_RS13280;Dbxref=GenBank:WP_000155631.1;Name=WP_000155631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459573.1;locus_tag=C9E95_RS13280;product=RamA family antibiotic efflux transcriptional regulator;protein_id=WP_000155631.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 14014 14262 . - . ID=gene-C9E95_RS13285;Name=C9E95_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13285;old_locus_tag=C9E95_13625 NZ_PYJW01000123.1 Protein Homology CDS 14014 14262 . - 0 ID=cds-WP_000682497.1;Parent=gene-C9E95_RS13285;Dbxref=GenBank:WP_000682497.1;Name=WP_000682497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459574.1;locus_tag=C9E95_RS13285;product=DUF1158 family protein;protein_id=WP_000682497.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 14329 15447 . - . ID=gene-C9E95_RS13290;Name=C9E95_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13290;old_locus_tag=C9E95_13630 NZ_PYJW01000123.1 Protein Homology CDS 14329 15447 . - 0 ID=cds-WP_001196905.1;Parent=gene-C9E95_RS13290;Dbxref=GenBank:WP_001196905.1;Name=WP_001196905.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459575.1;locus_tag=C9E95_RS13290;product=YbdK family carboxylate-amine ligase;protein_id=WP_001196905.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 15459 16163 . - . ID=gene-C9E95_RS13295;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=C9E95_RS13295;old_locus_tag=C9E95_13635 NZ_PYJW01000123.1 Protein Homology CDS 15459 16163 . - 0 ID=cds-WP_080203779.1;Parent=gene-C9E95_RS13295;Dbxref=GenBank:WP_080203779.1;Name=WP_080203779.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459576.1;locus_tag=C9E95_RS13295;product=enterobactin synthase subunit EntD;protein_id=WP_080203779.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 16209 18464 . - . ID=gene-C9E95_RS13300;Name=C9E95_RS13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13300;old_locus_tag=C9E95_13640 NZ_PYJW01000123.1 Protein Homology CDS 16209 18464 . - 0 ID=cds-WP_080203778.1;Parent=gene-C9E95_RS13300;Dbxref=GenBank:WP_080203778.1;Name=WP_080203778.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459577.1;locus_tag=C9E95_RS13300;product=TonB-dependent siderophore receptor;protein_id=WP_080203778.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 18653 19867 . + . ID=gene-C9E95_RS13305;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=C9E95_RS13305;old_locus_tag=C9E95_13645 NZ_PYJW01000123.1 Protein Homology CDS 18653 19867 . + 0 ID=cds-WP_000656599.1;Parent=gene-C9E95_RS13305;Dbxref=GenBank:WP_000656599.1;Name=WP_000656599.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459578.1;locus_tag=C9E95_RS13305;product=enterochelin esterase;protein_id=WP_000656599.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 19898 20116 . + . ID=gene-C9E95_RS13310;Name=C9E95_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13310;old_locus_tag=C9E95_13650 NZ_PYJW01000123.1 Protein Homology CDS 19898 20116 . + 0 ID=cds-WP_000396006.1;Parent=gene-C9E95_RS13310;Dbxref=GenBank:WP_000396006.1;Name=WP_000396006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459579.1;locus_tag=C9E95_RS13310;product=MbtH family protein;protein_id=WP_000396006.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 20113 23997 . + . ID=gene-C9E95_RS13315;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=C9E95_RS13315;old_locus_tag=C9E95_13655 NZ_PYJW01000123.1 Protein Homology CDS 20113 23997 . + 0 ID=cds-WP_000194141.1;Parent=gene-C9E95_RS13315;Dbxref=GenBank:WP_000194141.1;Name=WP_000194141.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=C9E95_RS13315;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_000194141.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 24247 25383 . + . ID=gene-C9E95_RS13320;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=C9E95_RS13320;old_locus_tag=C9E95_13660 NZ_PYJW01000123.1 Protein Homology CDS 24247 25383 . + 0 ID=cds-WP_001139585.1;Parent=gene-C9E95_RS13320;Dbxref=GenBank:WP_001139585.1;Name=WP_001139585.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=C9E95_RS13320;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WP_001139585.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 25437 26231 . - . ID=gene-C9E95_RS13325;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=C9E95_RS13325;old_locus_tag=C9E95_13665 NZ_PYJW01000123.1 Protein Homology CDS 25437 26231 . - 0 ID=cds-WP_000140622.1;Parent=gene-C9E95_RS13325;Dbxref=GenBank:WP_000140622.1;Name=WP_000140622.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459582.1;locus_tag=C9E95_RS13325;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_000140622.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 26228 27217 . - . ID=gene-C9E95_RS13330;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=C9E95_RS13330;old_locus_tag=C9E95_13670 NZ_PYJW01000123.1 Protein Homology CDS 26228 27217 . - 0 ID=cds-WP_000480064.1;Parent=gene-C9E95_RS13330;Dbxref=GenBank:WP_000480064.1;Name=WP_000480064.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459583.1;locus_tag=C9E95_RS13330;product=iron-enterobactin ABC transporter permease;protein_id=WP_000480064.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 27217 28224 . - . ID=gene-C9E95_RS13335;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=C9E95_RS13335;old_locus_tag=C9E95_13675 NZ_PYJW01000123.1 Protein Homology CDS 27217 28224 . - 0 ID=cds-WP_001277879.1;Parent=gene-C9E95_RS13335;Dbxref=GenBank:WP_001277879.1;Name=WP_001277879.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459584.1;locus_tag=C9E95_RS13335;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_001277879.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 28335 29579 . + . ID=gene-C9E95_RS13340;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=C9E95_RS13340;old_locus_tag=C9E95_13680 NZ_PYJW01000123.1 Protein Homology CDS 28335 29579 . + 0 ID=cds-WP_001081661.1;Parent=gene-C9E95_RS13340;Dbxref=GenBank:WP_001081661.1;Name=WP_001081661.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459585.1;locus_tag=C9E95_RS13340;product=enterobactin transporter EntS;protein_id=WP_001081661.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 29642 30598 . - . ID=gene-C9E95_RS13345;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=C9E95_RS13345;old_locus_tag=C9E95_13685 NZ_PYJW01000123.1 Protein Homology CDS 29642 30598 . - 0 ID=cds-WP_001238992.1;Parent=gene-C9E95_RS13345;Dbxref=GenBank:WP_001238992.1;Name=WP_001238992.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459586.1;locus_tag=C9E95_RS13345;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_001238992.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 30907 32082 . + . ID=gene-C9E95_RS13350;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=C9E95_RS13350;old_locus_tag=C9E95_13690 NZ_PYJW01000123.1 Protein Homology CDS 30907 32082 . + 0 ID=cds-WP_000367596.1;Parent=gene-C9E95_RS13350;Dbxref=GenBank:WP_000367596.1;Name=WP_000367596.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=C9E95_RS13350;product=isochorismate synthase EntC;protein_id=WP_000367596.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 32092 33702 . + . ID=gene-C9E95_RS13355;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=C9E95_RS13355;old_locus_tag=C9E95_13695 NZ_PYJW01000123.1 Protein Homology CDS 32092 33702 . + 0 ID=cds-WP_135369852.1;Parent=gene-C9E95_RS13355;Dbxref=GenBank:WP_135369852.1;Name=WP_135369852.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459588.1;locus_tag=C9E95_RS13355;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_135369852.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 33716 34573 . + . ID=gene-C9E95_RS13360;Name=C9E95_RS13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13360;old_locus_tag=C9E95_13700 NZ_PYJW01000123.1 Protein Homology CDS 33716 34573 . + 0 ID=cds-WP_001007166.1;Parent=gene-C9E95_RS13360;Dbxref=GenBank:WP_001007166.1;Name=WP_001007166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459589.1;locus_tag=C9E95_RS13360;product=isochorismatase;protein_id=WP_001007166.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 34573 35328 . + . ID=gene-C9E95_RS13365;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=C9E95_RS13365;old_locus_tag=C9E95_13705 NZ_PYJW01000123.1 Protein Homology CDS 34573 35328 . + 0 ID=cds-WP_021000048.1;Parent=gene-C9E95_RS13365;Dbxref=GenBank:WP_021000048.1;Name=WP_021000048.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459590.1;locus_tag=C9E95_RS13365;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_021000048.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 35331 35744 . + . ID=gene-C9E95_RS13370;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=C9E95_RS13370;old_locus_tag=C9E95_13710 NZ_PYJW01000123.1 Protein Homology CDS 35331 35744 . + 0 ID=cds-WP_000637966.1;Parent=gene-C9E95_RS13370;Dbxref=GenBank:WP_000637966.1;Name=WP_000637966.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459591.1;locus_tag=C9E95_RS13370;product=proofreading thioesterase EntH;protein_id=WP_000637966.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 35926 38031 . + . ID=gene-C9E95_RS13375;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=C9E95_RS13375;old_locus_tag=C9E95_13715 NZ_PYJW01000123.1 Protein Homology CDS 35926 38031 . + 0 ID=cds-WP_001043108.1;Parent=gene-C9E95_RS13375;Dbxref=GenBank:WP_001043108.1;Name=WP_001043108.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459592.1;locus_tag=C9E95_RS13375;product=pyruvate/proton symporter CstA;protein_id=WP_001043108.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 38095 38292 . + . ID=gene-C9E95_RS13380;Name=C9E95_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13380;old_locus_tag=C9E95_13720 NZ_PYJW01000123.1 Protein Homology CDS 38095 38292 . + 0 ID=cds-WP_000460619.1;Parent=gene-C9E95_RS13380;Dbxref=GenBank:WP_000460619.1;Name=WP_000460619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=C9E95_RS13380;product=YbdD/YjiX family protein;protein_id=WP_000460619.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 38328 39416 . - . ID=gene-C9E95_RS13385;Name=C9E95_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13385;old_locus_tag=C9E95_13725 NZ_PYJW01000123.1 Protein Homology CDS 38328 39416 . - 0 ID=cds-WP_001016847.1;Parent=gene-C9E95_RS13385;Dbxref=GenBank:WP_001016847.1;Name=WP_001016847.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459594.1;locus_tag=C9E95_RS13385;product=oxidoreductase;protein_id=WP_001016847.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 39543 40703 . + . ID=gene-C9E95_RS13390;Name=C9E95_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13390;old_locus_tag=C9E95_13730 NZ_PYJW01000123.1 Protein Homology CDS 39543 40703 . + 0 ID=cds-WP_135369851.1;Parent=gene-C9E95_RS13390;Dbxref=GenBank:WP_135369851.1;Name=WP_135369851.1;Ontology_term=GO:0008483,GO:0016740;gbkey=CDS;go_function=transaminase activity|0008483||IEA,transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459595.1;locus_tag=C9E95_RS13390;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_135369851.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 40704 41321 . - . ID=gene-C9E95_RS13395;Name=C9E95_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13395;old_locus_tag=C9E95_13735 NZ_PYJW01000123.1 Protein Homology CDS 40704 41321 . - 0 ID=cds-WP_001164755.1;Parent=gene-C9E95_RS13395;Dbxref=GenBank:WP_001164755.1;Name=WP_001164755.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459596.1;locus_tag=C9E95_RS13395;product=IbrB-like domain-containing protein;protein_id=WP_001164755.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 41294 42529 . - . ID=gene-C9E95_RS13400;Name=C9E95_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13400;old_locus_tag=C9E95_13740 NZ_PYJW01000123.1 Protein Homology CDS 41294 42529 . - 0 ID=cds-WP_000118142.1;Parent=gene-C9E95_RS13400;Dbxref=GenBank:WP_000118142.1;Name=WP_000118142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459597.1;locus_tag=C9E95_RS13400;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000118142.1;transl_table=11 NZ_PYJW01000123.1 RefSeq gene 42694 43599 . - . ID=gene-C9E95_RS13405;Name=citR;gbkey=Gene;gene=citR;gene_biotype=protein_coding;gene_synonym=ybdO;locus_tag=C9E95_RS13405;old_locus_tag=C9E95_13745 NZ_PYJW01000123.1 Protein Homology CDS 42694 43599 . - 0 ID=cds-WP_061378695.1;Parent=gene-C9E95_RS13405;Dbxref=GenBank:WP_061378695.1;Name=WP_061378695.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=citR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459598.1;locus_tag=C9E95_RS13405;product=DNA-binding transcriptional repressor CitR;protein_id=WP_061378695.1;transl_table=11 ##sequence-region NZ_PYJW01000088.1 1 120522 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000088.1 RefSeq region 1 120522 . + . ID=NZ_PYJW01000088.1:1..120522;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000088.1 RefSeq gene 99 746 . - . ID=gene-C9E95_RS09275;Name=C9E95_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09275;old_locus_tag=C9E95_09505 NZ_PYJW01000088.1 Protein Homology CDS 99 746 . - 0 ID=cds-WP_001109471.1;Parent=gene-C9E95_RS09275;Dbxref=GenBank:WP_001109471.1;Name=WP_001109471.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=C9E95_RS09275;product=MBL fold metallo-hydrolase;protein_id=WP_001109471.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 774 1322 . - . ID=gene-C9E95_RS09280;Name=C9E95_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09280;old_locus_tag=C9E95_09510 NZ_PYJW01000088.1 Protein Homology CDS 774 1322 . - 0 ID=cds-WP_000357052.1;Parent=gene-C9E95_RS09280;Dbxref=GenBank:WP_000357052.1;Name=WP_000357052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459971.1;locus_tag=C9E95_RS09280;product=YcbK family protein;protein_id=WP_000357052.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 1582 3429 . - . ID=gene-C9E95_RS09285;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=C9E95_RS09285;old_locus_tag=C9E95_09520 NZ_PYJW01000088.1 Protein Homology CDS 1582 3429 . - 0 ID=cds-WP_000925896.1;Parent=gene-C9E95_RS09285;Dbxref=GenBank:WP_000925896.1;Name=WP_000925896.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459970.1;locus_tag=C9E95_RS09285;product=L%2CD-transpeptidase;protein_id=WP_000925896.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 3774 8240 . - . ID=gene-C9E95_RS09295;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=C9E95_RS09295;old_locus_tag=C9E95_09525 NZ_PYJW01000088.1 Protein Homology CDS 3774 8240 . - 0 ID=cds-WP_063916596.1;Parent=gene-C9E95_RS09295;Dbxref=GenBank:WP_063916596.1;Name=WP_063916596.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459969.1;locus_tag=C9E95_RS09295;product=chromosome partition protein MukB;protein_id=WP_063916596.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 8240 8944 . - . ID=gene-C9E95_RS09300;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=C9E95_RS09300;old_locus_tag=C9E95_09530 NZ_PYJW01000088.1 Protein Homology CDS 8240 8944 . - 0 ID=cds-WP_000060027.1;Parent=gene-C9E95_RS09300;Dbxref=GenBank:WP_000060027.1;Name=WP_000060027.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=C9E95_RS09300;product=chromosome partition protein MukE;protein_id=WP_000060027.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 8925 10247 . - . ID=gene-C9E95_RS09305;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=C9E95_RS09305;old_locus_tag=C9E95_09535 NZ_PYJW01000088.1 Protein Homology CDS 8925 10247 . - 0 ID=cds-WP_001288828.1;Parent=gene-C9E95_RS09305;Dbxref=GenBank:WP_001288828.1;Name=WP_001288828.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=C9E95_RS09305;product=chromosome partition protein MukF;protein_id=WP_001288828.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 10240 11043 . - . ID=gene-C9E95_RS09310;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=C9E95_RS09310;old_locus_tag=C9E95_09540 NZ_PYJW01000088.1 Protein Homology CDS 10240 11043 . - 0 ID=cds-WP_001154025.1;Parent=gene-C9E95_RS09310;Dbxref=GenBank:WP_001154025.1;Name=WP_001154025.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459966.1;locus_tag=C9E95_RS09310;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_001154025.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 11179 11955 . + . ID=gene-C9E95_RS09315;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=C9E95_RS09315;old_locus_tag=C9E95_09545 NZ_PYJW01000088.1 Protein Homology CDS 11179 11955 . + 0 ID=cds-WP_000899554.1;Parent=gene-C9E95_RS09315;Dbxref=GenBank:WP_000899554.1;Name=WP_000899554.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459965.1;locus_tag=C9E95_RS09315;product=envelope biogenesis factor ElyC;protein_id=WP_000899554.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 11935 12828 . - . ID=gene-C9E95_RS09320;Name=C9E95_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09320;old_locus_tag=C9E95_09550 NZ_PYJW01000088.1 Protein Homology CDS 11935 12828 . - 0 ID=cds-WP_080204083.1;Parent=gene-C9E95_RS09320;Dbxref=GenBank:WP_080204083.1;Name=WP_080204083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459964.1;locus_tag=C9E95_RS09320;product=YcbJ family phosphotransferase;protein_id=WP_080204083.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 13039 13785 . - . ID=gene-C9E95_RS09330;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=C9E95_RS09330;old_locus_tag=C9E95_09555 NZ_PYJW01000088.1 Protein Homology CDS 13039 13785 . - 0 ID=cds-WP_000011576.1;Parent=gene-C9E95_RS09330;Dbxref=GenBank:WP_000011576.1;Name=WP_000011576.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459963.1;locus_tag=C9E95_RS09330;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_000011576.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 13782 13964 . - . ID=gene-C9E95_RS09335;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=C9E95_RS09335;old_locus_tag=C9E95_09560 NZ_PYJW01000088.1 Protein Homology CDS 13782 13964 . - 0 ID=cds-WP_000350061.1;Parent=gene-C9E95_RS09335;Dbxref=GenBank:WP_000350061.1;Name=WP_000350061.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459962.1;locus_tag=C9E95_RS09335;product=protein YcaR;protein_id=WP_000350061.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 14016 15248 . - . ID=gene-C9E95_RS09340;Name=C9E95_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09340;old_locus_tag=C9E95_09565 NZ_PYJW01000088.1 Protein Homology CDS 14016 15248 . - 0 ID=cds-WP_080204082.1;Parent=gene-C9E95_RS09340;Dbxref=GenBank:WP_080204082.1;Name=WP_080204082.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459961.1;locus_tag=C9E95_RS09340;product=winged helix-turn-helix domain-containing protein;protein_id=WP_080204082.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 15292 16269 . - . ID=gene-C9E95_RS09345;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=C9E95_RS09345;old_locus_tag=C9E95_09570 NZ_PYJW01000088.1 Protein Homology CDS 15292 16269 . - 0 ID=cds-WP_000561679.1;Parent=gene-C9E95_RS09345;Dbxref=GenBank:WP_000561679.1;Name=WP_000561679.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459960.1;locus_tag=C9E95_RS09345;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_000561679.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 16266 18014 . - . ID=gene-C9E95_RS09350;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=C9E95_RS09350;old_locus_tag=C9E95_09575 NZ_PYJW01000088.1 Protein Homology CDS 16266 18014 . - 0 ID=cds-WP_000551246.1;Parent=gene-C9E95_RS09350;Dbxref=GenBank:WP_000551246.1;Name=WP_000551246.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459959.1;locus_tag=C9E95_RS09350;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_000551246.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 18051 20315 . - . ID=gene-C9E95_RS09355;Name=C9E95_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09355;old_locus_tag=C9E95_09580 NZ_PYJW01000088.1 Protein Homology CDS 18051 20315 . - 0 ID=cds-WP_080204081.1;Parent=gene-C9E95_RS09355;Dbxref=GenBank:WP_080204081.1;Name=WP_080204081.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459958.1;locus_tag=C9E95_RS09355;product=ComEC family protein;protein_id=WP_080204081.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 20545 20829 . - . ID=gene-C9E95_RS09360;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=C9E95_RS09360;old_locus_tag=C9E95_09585 NZ_PYJW01000088.1 Protein Homology CDS 20545 20829 . - 0 ID=cds-WP_000167332.1;Parent=gene-C9E95_RS09360;Dbxref=GenBank:WP_000167332.1;Name=WP_000167332.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=C9E95_RS09360;product=integration host factor subunit beta;protein_id=WP_000167332.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 20985 22658 . - . ID=gene-C9E95_RS09365;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=C9E95_RS09365;old_locus_tag=C9E95_09590 NZ_PYJW01000088.1 Protein Homology CDS 20985 22658 . - 0 ID=cds-WP_000140324.1;Parent=gene-C9E95_RS09365;Dbxref=GenBank:WP_000140324.1;Name=WP_000140324.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=C9E95_RS09365;product=30S ribosomal protein S1;protein_id=WP_000140324.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 22772 23455 . - . ID=gene-C9E95_RS09370;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=C9E95_RS09370;old_locus_tag=C9E95_09595 NZ_PYJW01000088.1 Protein Homology CDS 22772 23455 . - 0 ID=cds-WP_080204080.1;Parent=gene-C9E95_RS09370;Dbxref=GenBank:WP_080204080.1;Name=WP_080204080.1;Ontology_term=GO:0015949,GO:0004127,GO:0005524;gbkey=CDS;gene=cmk;go_function=(d)CMP kinase activity|0004127||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=C9E95_RS09370;product=(d)CMP kinase;protein_id=WP_080204080.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 23628 24389 . - . ID=gene-C9E95_RS09375;Name=C9E95_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09375;old_locus_tag=C9E95_09600 NZ_PYJW01000088.1 Protein Homology CDS 23628 24389 . - 0 ID=cds-WP_000792301.1;Parent=gene-C9E95_RS09375;Dbxref=GenBank:WP_000792301.1;Name=WP_000792301.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459954.1;locus_tag=C9E95_RS09375;product=M48 family metallopeptidase;protein_id=WP_000792301.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 24532 25815 . - . ID=gene-C9E95_RS09380;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=C9E95_RS09380;old_locus_tag=C9E95_09605 NZ_PYJW01000088.1 Protein Homology CDS 24532 25815 . - 0 ID=cds-WP_080204079.1;Parent=gene-C9E95_RS09380;Dbxref=GenBank:WP_080204079.1;Name=WP_080204079.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459953.1;locus_tag=C9E95_RS09380;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_080204079.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 25886 26974 . - . ID=gene-C9E95_RS09385;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=C9E95_RS09385;old_locus_tag=C9E95_09610 NZ_PYJW01000088.1 Protein Homology CDS 25886 26974 . - 0 ID=cds-WP_000079590.1;Parent=gene-C9E95_RS09385;Dbxref=GenBank:WP_000079590.1;Name=WP_000079590.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459952.1;locus_tag=C9E95_RS09385;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_000079590.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 27160 27852 . - . ID=gene-C9E95_RS09390;Name=C9E95_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09390;old_locus_tag=C9E95_09615 NZ_PYJW01000088.1 Protein Homology CDS 27160 27852 . - 0 ID=cds-WP_000642866.1;Parent=gene-C9E95_RS09390;Dbxref=GenBank:WP_000642866.1;Name=WP_000642866.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459951.1;locus_tag=C9E95_RS09390;product=DUF421 domain-containing protein;protein_id=WP_000642866.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 27989 29749 . + . ID=gene-C9E95_RS09395;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=C9E95_RS09395;old_locus_tag=C9E95_09620 NZ_PYJW01000088.1 Protein Homology CDS 27989 29749 . + 0 ID=cds-WP_000194822.1;Parent=gene-C9E95_RS09395;Dbxref=GenBank:WP_000194822.1;Name=WP_000194822.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=C9E95_RS09395;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_000194822.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 30155 31012 . + . ID=gene-C9E95_RS09400;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=C9E95_RS09400;old_locus_tag=C9E95_09625 NZ_PYJW01000088.1 Protein Homology CDS 30155 31012 . + 0 ID=cds-WP_000642539.1;Parent=gene-C9E95_RS09400;Dbxref=GenBank:WP_000642539.1;Name=WP_000642539.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459949.1;locus_tag=C9E95_RS09400;product=formate transporter FocA;protein_id=WP_000642539.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 31072 33354 . + . ID=gene-C9E95_RS09405;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=C9E95_RS09405;old_locus_tag=C9E95_09630 NZ_PYJW01000088.1 Protein Homology CDS 31072 33354 . + 0 ID=cds-WP_001292799.1;Parent=gene-C9E95_RS09405;Dbxref=GenBank:WP_001292799.1;Name=WP_001292799.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=C9E95_RS09405;product=formate C-acetyltransferase;protein_id=WP_001292799.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 33427 34386 . - . ID=gene-C9E95_RS09410;Name=sopD2;gbkey=Gene;gene=sopD2;gene_biotype=protein_coding;locus_tag=C9E95_RS09410;old_locus_tag=C9E95_09635 NZ_PYJW01000088.1 Protein Homology CDS 33427 34386 . - 0 ID=cds-WP_001145570.1;Parent=gene-C9E95_RS09410;Dbxref=GenBank:WP_001145570.1;Name=WP_001145570.1;gbkey=CDS;gene=sopD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459947.1;locus_tag=C9E95_RS09410;product=type III secretion system effector SopD2;protein_id=WP_001145570.1;transl_table=11 NZ_PYJW01000088.1 RefSeq pseudogene 34518 34843 . + . ID=gene-C9E95_RS23455;Name=C9E95_RS23455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23455;pseudo=true NZ_PYJW01000088.1 Protein Homology CDS 34518 34843 . + 0 ID=cds-C9E95_RS23455;Parent=gene-C9E95_RS23455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459946.1;locus_tag=C9E95_RS23455;product=cytoplasmic protein;pseudo=true;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 34962 35759 . + . ID=gene-C9E95_RS09420;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=C9E95_RS09420;old_locus_tag=C9E95_09645 NZ_PYJW01000088.1 Protein Homology CDS 34962 35759 . + 0 ID=cds-WP_000067928.1;Parent=gene-C9E95_RS09420;Dbxref=GenBank:WP_000067928.1;Name=WP_000067928.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015696619.1;locus_tag=C9E95_RS09420;product=pyruvate formate lyase 1-activating protein;protein_id=WP_000067928.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 36052 37473 . - . ID=gene-C9E95_RS09425;Name=C9E95_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09425;old_locus_tag=C9E95_09650 NZ_PYJW01000088.1 Protein Homology CDS 36052 37473 . - 0 ID=cds-WP_001134264.1;Parent=gene-C9E95_RS09425;Dbxref=GenBank:WP_001134264.1;Name=WP_001134264.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459944.1;locus_tag=C9E95_RS09425;product=APC family permease;protein_id=WP_001134264.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 37691 38839 . - . ID=gene-C9E95_RS09430;Name=C9E95_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09430;old_locus_tag=C9E95_09655 NZ_PYJW01000088.1 Protein Homology CDS 37691 38839 . - 0 ID=cds-WP_000109274.1;Parent=gene-C9E95_RS09430;Dbxref=GenBank:WP_000109274.1;Name=WP_000109274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459943.1;locus_tag=C9E95_RS09430;product=MFS transporter;protein_id=WP_000109274.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 39189 40052 . - . ID=gene-C9E95_RS09435;Name=C9E95_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09435;old_locus_tag=C9E95_09660 NZ_PYJW01000088.1 Protein Homology CDS 39189 40052 . - 0 ID=cds-WP_000534681.1;Parent=gene-C9E95_RS09435;Dbxref=GenBank:WP_000534681.1;Name=WP_000534681.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459942.1;locus_tag=C9E95_RS09435;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000534681.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 40054 40671 . - . ID=gene-C9E95_RS09440;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=C9E95_RS09440;old_locus_tag=C9E95_09665 NZ_PYJW01000088.1 Protein Homology CDS 40054 40671 . - 0 ID=cds-WP_080166607.1-2;Parent=gene-C9E95_RS09440;Dbxref=GenBank:WP_080166607.1;Name=WP_080166607.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=C9E95_RS09440;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_080166607.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 40682 43126 . - . ID=gene-C9E95_RS09445;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=C9E95_RS09445;old_locus_tag=C9E95_09670 NZ_PYJW01000088.1 Protein Homology CDS 40682 43126 . - 0 ID=cds-WP_000850250.1;Parent=gene-C9E95_RS09445;Dbxref=GenBank:WP_000850250.1;Name=WP_000850250.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459940.1;locus_tag=C9E95_RS09445;product=dimethylsulfoxide reductase subunit A;protein_id=WP_000850250.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 43363 44655 . - . ID=gene-C9E95_RS09450;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=C9E95_RS09450;old_locus_tag=C9E95_09675 NZ_PYJW01000088.1 Protein Homology CDS 43363 44655 . - 0 ID=cds-WP_000886697.1;Parent=gene-C9E95_RS09450;Dbxref=GenBank:WP_000886697.1;Name=WP_000886697.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=C9E95_RS09450;product=serine--tRNA ligase;protein_id=WP_000886697.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 44914 46257 . - . ID=gene-C9E95_RS09455;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=C9E95_RS09455;old_locus_tag=C9E95_09680 NZ_PYJW01000088.1 Protein Homology CDS 44914 46257 . - 0 ID=cds-WP_000067785.1;Parent=gene-C9E95_RS09455;Dbxref=GenBank:WP_000067785.1;Name=WP_000067785.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459938.1;locus_tag=C9E95_RS09455;product=replication-associated recombination protein RarA;protein_id=WP_000067785.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 46267 46878 . - . ID=gene-C9E95_RS09460;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=C9E95_RS09460;old_locus_tag=C9E95_09685 NZ_PYJW01000088.1 Protein Homology CDS 46267 46878 . - 0 ID=cds-WP_001519746.1;Parent=gene-C9E95_RS09460;Dbxref=GenBank:WP_001519746.1;Name=WP_001519746.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=C9E95_RS09460;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_001519746.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 47021 51055 . - . ID=gene-C9E95_RS09465;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=C9E95_RS09465;old_locus_tag=C9E95_09690 NZ_PYJW01000088.1 Protein Homology CDS 47021 51055 . - 0 ID=cds-WP_039512103.1;Parent=gene-C9E95_RS09465;Dbxref=GenBank:WP_039512103.1;Name=WP_039512103.1;Ontology_term=GO:0003677,GO:0005524;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=C9E95_RS09465;product=DNA translocase FtsK;protein_id=WP_039512103.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 51190 51684 . - . ID=gene-C9E95_RS09470;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=C9E95_RS09470;old_locus_tag=C9E95_09695 NZ_PYJW01000088.1 Protein Homology CDS 51190 51684 . - 0 ID=cds-WP_000228469.1;Parent=gene-C9E95_RS09470;Dbxref=GenBank:WP_000228469.1;Name=WP_000228469.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=C9E95_RS09470;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228469.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 52231 53199 . + . ID=gene-C9E95_RS09475;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=C9E95_RS09475;old_locus_tag=C9E95_09705 NZ_PYJW01000088.1 Protein Homology CDS 52231 53199 . + 0 ID=cds-WP_000537406.1;Parent=gene-C9E95_RS09475;Dbxref=GenBank:WP_000537406.1;Name=WP_000537406.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459934.1;locus_tag=C9E95_RS09475;product=thioredoxin-disulfide reductase;protein_id=WP_000537406.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 53313 55079 . + . ID=gene-C9E95_RS09480;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=C9E95_RS09480;old_locus_tag=C9E95_09710 NZ_PYJW01000088.1 Protein Homology CDS 53313 55079 . + 0 ID=cds-WP_001044545.1;Parent=gene-C9E95_RS09480;Dbxref=GenBank:WP_001044545.1;Name=WP_001044545.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459933.1;locus_tag=C9E95_RS09480;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_001044545.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 55080 56801 . + . ID=gene-C9E95_RS09485;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=C9E95_RS09485;old_locus_tag=C9E95_09715 NZ_PYJW01000088.1 Protein Homology CDS 55080 56801 . + 0 ID=cds-WP_001202257.1;Parent=gene-C9E95_RS09485;Dbxref=GenBank:WP_001202257.1;Name=WP_001202257.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459932.1;locus_tag=C9E95_RS09485;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_001202257.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 56846 57550 . + . ID=gene-C9E95_RS09490;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=C9E95_RS09490;old_locus_tag=C9E95_09720 NZ_PYJW01000088.1 Protein Homology CDS 56846 57550 . + 0 ID=cds-WP_061382937.1;Parent=gene-C9E95_RS09490;Dbxref=GenBank:WP_061382937.1;Name=WP_061382937.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459931.1;locus_tag=C9E95_RS09490;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_061382937.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 57862 58080 . + . ID=gene-C9E95_RS09500;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=C9E95_RS09500;old_locus_tag=C9E95_09730 NZ_PYJW01000088.1 Protein Homology CDS 57862 58080 . + 0 ID=cds-WP_001040187.1;Parent=gene-C9E95_RS09500;Dbxref=GenBank:WP_001040187.1;Name=WP_001040187.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=C9E95_RS09500;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 58171 59082 . - . ID=gene-C9E95_RS09505;Name=C9E95_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09505;old_locus_tag=C9E95_09735 NZ_PYJW01000088.1 Protein Homology CDS 58171 59082 . - 0 ID=cds-WP_000597928.1;Parent=gene-C9E95_RS09505;Dbxref=GenBank:WP_000597928.1;Name=WP_000597928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459928.1;locus_tag=C9E95_RS09505;product=LysR family transcriptional regulator;protein_id=WP_000597928.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 59191 60051 . + . ID=gene-C9E95_RS09510;Name=C9E95_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09510;old_locus_tag=C9E95_09740 NZ_PYJW01000088.1 Protein Homology CDS 59191 60051 . + 0 ID=cds-WP_000809969.1;Parent=gene-C9E95_RS09510;Dbxref=GenBank:WP_000809969.1;Name=WP_000809969.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459927.1;locus_tag=C9E95_RS09510;product=pirin family protein;protein_id=WP_000809969.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 60071 60748 . + . ID=gene-C9E95_RS09515;Name=C9E95_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09515;old_locus_tag=C9E95_09745 NZ_PYJW01000088.1 Protein Homology CDS 60071 60748 . + 0 ID=cds-WP_000097893.1;Parent=gene-C9E95_RS09515;Dbxref=GenBank:WP_000097893.1;Name=WP_000097893.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459926.1;locus_tag=C9E95_RS09515;product=hydrolase;protein_id=WP_000097893.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 60897 60984 . + . ID=gene-C9E95_RS09520;Name=C9E95_RS09520;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS09520;old_locus_tag=C9E95_09750 NZ_PYJW01000088.1 tRNAscan-SE tRNA 60897 60984 . + . ID=rna-C9E95_RS09520;Parent=gene-C9E95_RS09520;anticodon=(pos:60931..60933);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS09520;product=tRNA-Ser NZ_PYJW01000088.1 tRNAscan-SE exon 60897 60984 . + . ID=exon-C9E95_RS09520-1;Parent=rna-C9E95_RS09520;anticodon=(pos:60931..60933);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS09520;product=tRNA-Ser NZ_PYJW01000088.1 RefSeq pseudogene 61439 61792 . + . ID=gene-C9E95_RS23660;Name=C9E95_RS23660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23660;old_locus_tag=C9E95_09760;partial=true;pseudo=true;start_range=.,61439 NZ_PYJW01000088.1 Protein Homology CDS 61439 61792 . + 0 ID=cds-C9E95_RS23660;Parent=gene-C9E95_RS23660;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524896.1;locus_tag=C9E95_RS23660;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,61439;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 61954 62151 . + . ID=gene-C9E95_RS09530;Name=C9E95_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09530;old_locus_tag=C9E95_09765 NZ_PYJW01000088.1 Protein Homology CDS 61954 62151 . + 0 ID=cds-WP_001117984.1;Parent=gene-C9E95_RS09530;Dbxref=GenBank:WP_001117984.1;Name=WP_001117984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111984.1;locus_tag=C9E95_RS09530;product=hypothetical protein;protein_id=WP_001117984.1;transl_table=11 NZ_PYJW01000088.1 RefSeq pseudogene 62347 63230 . + . ID=gene-C9E95_RS09535;Name=C9E95_RS09535;end_range=63230,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS09535;old_locus_tag=C9E95_09770;partial=true;pseudo=true NZ_PYJW01000088.1 Protein Homology CDS 62347 63230 . + 0 ID=cds-C9E95_RS09535;Parent=gene-C9E95_RS09535;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=63230,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=C9E95_RS09535;partial=true;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 63213 63407 . + . ID=gene-C9E95_RS23275;Name=C9E95_RS23275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23275 NZ_PYJW01000088.1 GeneMarkS-2+ CDS 63213 63407 . + 0 ID=cds-WP_071990498.1;Parent=gene-C9E95_RS23275;Dbxref=GenBank:WP_071990498.1;Name=WP_071990498.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS23275;product=hypothetical protein;protein_id=WP_071990498.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 63427 63903 . + . ID=gene-C9E95_RS09540;Name=C9E95_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09540;old_locus_tag=C9E95_09775 NZ_PYJW01000088.1 Protein Homology CDS 63427 63903 . + 0 ID=cds-WP_001747668.1;Parent=gene-C9E95_RS09540;Dbxref=GenBank:WP_001747668.1;Name=WP_001747668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747668.1;locus_tag=C9E95_RS09540;product=hypothetical protein;protein_id=WP_001747668.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 63988 64368 . + . ID=gene-C9E95_RS23175;Name=C9E95_RS23175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23175 NZ_PYJW01000088.1 GeneMarkS-2+ CDS 63988 64368 . + 0 ID=cds-WP_167850620.1;Parent=gene-C9E95_RS23175;Dbxref=GenBank:WP_167850620.1;Name=WP_167850620.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS23175;product=hypothetical protein;protein_id=WP_167850620.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 64399 66675 . - . ID=gene-C9E95_RS09550;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=C9E95_RS09550;old_locus_tag=C9E95_09785 NZ_PYJW01000088.1 Protein Homology CDS 64399 66675 . - 0 ID=cds-WP_000934064.1;Parent=gene-C9E95_RS09550;Dbxref=GenBank:WP_000934064.1;Name=WP_000934064.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459922.1;locus_tag=C9E95_RS09550;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_000934064.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 66706 67026 . - . ID=gene-C9E95_RS09555;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=C9E95_RS09555;old_locus_tag=C9E95_09790 NZ_PYJW01000088.1 Protein Homology CDS 66706 67026 . - 0 ID=cds-WP_000520789.1;Parent=gene-C9E95_RS09555;Dbxref=GenBank:WP_000520789.1;Name=WP_000520789.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=C9E95_RS09555;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_000520789.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 67122 67199 . - . ID=gene-C9E95_RS23470;Name=C9E95_RS23470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23470 NZ_PYJW01000088.1 Protein Homology CDS 67122 67199 . - 0 ID=cds-WP_212742690.1;Parent=gene-C9E95_RS23470;Dbxref=GenBank:WP_212742690.1;Name=WP_212742690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=C9E95_RS23470;product=hypothetical protein;protein_id=WP_212742690.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 67350 67571 . + . ID=gene-C9E95_RS09560;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=C9E95_RS09560;old_locus_tag=C9E95_09795 NZ_PYJW01000088.1 Protein Homology CDS 67350 67571 . + 0 ID=cds-WP_000447499.1;Parent=gene-C9E95_RS09560;Dbxref=GenBank:WP_000447499.1;Name=WP_000447499.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459920.1;locus_tag=C9E95_RS09560;product=cold shock-like protein CspD;protein_id=WP_000447499.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 67701 69647 . - . ID=gene-C9E95_RS09565;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=C9E95_RS09565;old_locus_tag=C9E95_09805 NZ_PYJW01000088.1 Protein Homology CDS 67701 69647 . - 0 ID=cds-WP_000125894.1;Parent=gene-C9E95_RS09565;Dbxref=GenBank:WP_000125894.1;Name=WP_000125894.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459919.1;locus_tag=C9E95_RS09565;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_000125894.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 69644 70762 . - . ID=gene-C9E95_RS09570;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=C9E95_RS09570;old_locus_tag=C9E95_09810 NZ_PYJW01000088.1 Protein Homology CDS 69644 70762 . - 0 ID=cds-WP_023212628.1;Parent=gene-C9E95_RS09570;Dbxref=GenBank:WP_023212628.1;Name=WP_023212628.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459918.1;locus_tag=C9E95_RS09570;product=macrolide transporter subunit MacA;protein_id=WP_023212628.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 70908 71858 . + . ID=gene-C9E95_RS09575;Name=C9E95_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09575;old_locus_tag=C9E95_09815 NZ_PYJW01000088.1 Protein Homology CDS 70908 71858 . + 0 ID=cds-WP_001617140.1;Parent=gene-C9E95_RS09575;Dbxref=GenBank:WP_001617140.1;Name=WP_001617140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519667.1;locus_tag=C9E95_RS09575;product=VirK/YbjX family protein;protein_id=WP_001617140.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 71855 73513 . - . ID=gene-C9E95_RS09580;Name=C9E95_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09580;old_locus_tag=C9E95_09820 NZ_PYJW01000088.1 Protein Homology CDS 71855 73513 . - 0 ID=cds-WP_000599765.1;Parent=gene-C9E95_RS09580;Dbxref=GenBank:WP_000599765.1;Name=WP_000599765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459916.2;locus_tag=C9E95_RS09580;product=ATP-dependent endonuclease;protein_id=WP_000599765.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 73715 74614 . + . ID=gene-C9E95_RS09585;Name=C9E95_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09585;old_locus_tag=C9E95_09830 NZ_PYJW01000088.1 Protein Homology CDS 73715 74614 . + 0 ID=cds-WP_000491118.1;Parent=gene-C9E95_RS09585;Dbxref=GenBank:WP_000491118.1;Name=WP_000491118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459915.1;locus_tag=C9E95_RS09585;product=lysine exporter LysO family protein;protein_id=WP_000491118.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 74758 76410 . + . ID=gene-C9E95_RS09590;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=C9E95_RS09590;old_locus_tag=C9E95_09835 NZ_PYJW01000088.1 Protein Homology CDS 74758 76410 . + 0 ID=cds-WP_000458793.1;Parent=gene-C9E95_RS09590;Dbxref=GenBank:WP_000458793.1;Name=WP_000458793.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=C9E95_RS09590;product=hydroxylamine reductase;protein_id=WP_000458793.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 76422 77390 . + . ID=gene-C9E95_RS09595;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=C9E95_RS09595;old_locus_tag=C9E95_09840 NZ_PYJW01000088.1 Protein Homology CDS 76422 77390 . + 0 ID=cds-WP_001538209.1;Parent=gene-C9E95_RS09595;Dbxref=GenBank:WP_001538209.1;Name=WP_001538209.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308985.1;locus_tag=C9E95_RS09595;product=NADH oxidoreductase;protein_id=WP_001538209.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 77548 79266 . + . ID=gene-C9E95_RS09600;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=C9E95_RS09600;old_locus_tag=C9E95_09845 NZ_PYJW01000088.1 Protein Homology CDS 77548 79266 . + 0 ID=cds-WP_023213217.1;Parent=gene-C9E95_RS09600;Dbxref=GenBank:WP_023213217.1;Name=WP_023213217.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459912.1;locus_tag=C9E95_RS09600;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_023213217.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 79305 80306 . + . ID=gene-C9E95_RS09605;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=C9E95_RS09605;old_locus_tag=C9E95_09850 NZ_PYJW01000088.1 Protein Homology CDS 79305 80306 . + 0 ID=cds-WP_023193865.1;Parent=gene-C9E95_RS09605;Dbxref=GenBank:WP_023193865.1;Name=WP_023193865.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459911.1;locus_tag=C9E95_RS09605;product=low-specificity L-threonine aldolase;protein_id=WP_023193865.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 80317 81750 . + . ID=gene-C9E95_RS09610;Name=C9E95_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09610;old_locus_tag=C9E95_09855 NZ_PYJW01000088.1 Protein Homology CDS 80317 81750 . + 0 ID=cds-WP_023993621.1;Parent=gene-C9E95_RS09610;Dbxref=GenBank:WP_023993621.1;Name=WP_023993621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459910.1;locus_tag=C9E95_RS09610;product=SDR family oxidoreductase;protein_id=WP_023993621.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 81846 82859 . + . ID=gene-C9E95_RS09615;Name=C9E95_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09615;old_locus_tag=C9E95_09860 NZ_PYJW01000088.1 Protein Homology CDS 81846 82859 . + 0 ID=cds-WP_000866905.1;Parent=gene-C9E95_RS09615;Dbxref=GenBank:WP_000866905.1;Name=WP_000866905.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459909.1;locus_tag=C9E95_RS09615;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_000866905.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 82856 83686 . - . ID=gene-C9E95_RS09620;Name=C9E95_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09620;old_locus_tag=C9E95_09865 NZ_PYJW01000088.1 Protein Homology CDS 82856 83686 . - 0 ID=cds-WP_001202293.1;Parent=gene-C9E95_RS09620;Dbxref=GenBank:WP_001202293.1;Name=WP_001202293.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745,GO:0042834,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459908.1;locus_tag=C9E95_RS09620;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_001202293.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 83683 84006 . - . ID=gene-C9E95_RS09625;Name=C9E95_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09625;old_locus_tag=C9E95_09870 NZ_PYJW01000088.1 Protein Homology CDS 83683 84006 . - 0 ID=cds-WP_001160725.1;Parent=gene-C9E95_RS09625;Dbxref=GenBank:WP_001160725.1;Name=WP_001160725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=C9E95_RS09625;product=heavy metal-binding domain-containing protein;protein_id=WP_001160725.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 84134 84649 . + . ID=gene-C9E95_RS09630;Name=C9E95_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09630;old_locus_tag=C9E95_09875 NZ_PYJW01000088.1 Protein Homology CDS 84134 84649 . + 0 ID=cds-WP_001270724.1;Parent=gene-C9E95_RS09630;Dbxref=GenBank:WP_001270724.1;Name=WP_001270724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459868.1;locus_tag=C9E95_RS09630;product=lipoprotein;protein_id=WP_001270724.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 84879 85607 . + . ID=gene-C9E95_RS09635;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=C9E95_RS09635;old_locus_tag=C9E95_09880 NZ_PYJW01000088.1 Protein Homology CDS 84879 85607 . + 0 ID=cds-WP_000027186.1;Parent=gene-C9E95_RS09635;Dbxref=GenBank:WP_000027186.1;Name=WP_000027186.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=C9E95_RS09635;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_000027186.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 85625 86356 . + . ID=gene-C9E95_RS09640;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=C9E95_RS09640;old_locus_tag=C9E95_09885 NZ_PYJW01000088.1 Protein Homology CDS 85625 86356 . + 0 ID=cds-WP_000756586.1;Parent=gene-C9E95_RS09640;Dbxref=GenBank:WP_000756586.1;Name=WP_000756586.1;Ontology_term=GO:0015424,GO:0043190;gbkey=CDS;gene=artI;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type amino acid transporter activity|0015424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459866.1;locus_tag=C9E95_RS09640;product=arginine ABC transporter substrate-binding protein ArtI;protein_id=WP_000756586.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 86363 87079 . + . ID=gene-C9E95_RS09645;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=C9E95_RS09645;old_locus_tag=C9E95_09890 NZ_PYJW01000088.1 Protein Homology CDS 86363 87079 . + 0 ID=cds-WP_001001677.1;Parent=gene-C9E95_RS09645;Dbxref=GenBank:WP_001001677.1;Name=WP_001001677.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459865.1;locus_tag=C9E95_RS09645;product=arginine ABC transporter permease ArtQ;protein_id=WP_001001677.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 87079 87747 . + . ID=gene-C9E95_RS09650;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=C9E95_RS09650;old_locus_tag=C9E95_09895 NZ_PYJW01000088.1 Protein Homology CDS 87079 87747 . + 0 ID=cds-WP_000895393.1;Parent=gene-C9E95_RS09650;Dbxref=GenBank:WP_000895393.1;Name=WP_000895393.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459864.1;locus_tag=C9E95_RS09650;product=arginine ABC transporter permease ArtM;protein_id=WP_000895393.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 87984 88715 . + . ID=gene-C9E95_RS09655;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=C9E95_RS09655;old_locus_tag=C9E95_09900 NZ_PYJW01000088.1 Protein Homology CDS 87984 88715 . + 0 ID=cds-WP_000737538.1;Parent=gene-C9E95_RS09655;Dbxref=GenBank:WP_000737538.1;Name=WP_000737538.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459863.1;locus_tag=C9E95_RS09655;product=arginine ABC transporter substrate-binding protein ArtJ;protein_id=WP_000737538.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 88934 90421 . - . ID=gene-C9E95_RS09660;Name=C9E95_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09660;old_locus_tag=C9E95_09910 NZ_PYJW01000088.1 Protein Homology CDS 88934 90421 . - 0 ID=cds-WP_000644018.1;Parent=gene-C9E95_RS09660;Dbxref=GenBank:WP_000644018.1;Name=WP_000644018.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459862.1;locus_tag=C9E95_RS09660;product=sulfatase;protein_id=WP_000644018.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 90431 90751 . - . ID=gene-C9E95_RS09665;Name=C9E95_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09665;old_locus_tag=C9E95_09915 NZ_PYJW01000088.1 Protein Homology CDS 90431 90751 . - 0 ID=cds-WP_000655399.1;Parent=gene-C9E95_RS09665;Dbxref=GenBank:WP_000655399.1;Name=WP_000655399.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459861.1;locus_tag=C9E95_RS09665;product=PTS sugar transporter subunit IIB;protein_id=WP_000655399.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 90781 92124 . - . ID=gene-C9E95_RS09670;Name=C9E95_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09670;old_locus_tag=C9E95_09920 NZ_PYJW01000088.1 Protein Homology CDS 90781 92124 . - 0 ID=cds-WP_000399323.1;Parent=gene-C9E95_RS09670;Dbxref=GenBank:WP_000399323.1;Name=WP_000399323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459860.1;locus_tag=C9E95_RS09670;product=PTS sugar transporter subunit IIC;protein_id=WP_000399323.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 92419 93546 . - . ID=gene-C9E95_RS09675;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=C9E95_RS09675;old_locus_tag=C9E95_09925 NZ_PYJW01000088.1 Protein Homology CDS 92419 93546 . - 0 ID=cds-WP_001623325.1;Parent=gene-C9E95_RS09675;Dbxref=GenBank:WP_001623325.1;Name=WP_001623325.1;Ontology_term=GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149796.1;locus_tag=C9E95_RS09675;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_001623325.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 93589 94062 . - . ID=gene-C9E95_RS09680;Name=C9E95_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09680;old_locus_tag=C9E95_09930 NZ_PYJW01000088.1 Protein Homology CDS 93589 94062 . - 0 ID=cds-WP_000505788.1;Parent=gene-C9E95_RS09680;Dbxref=GenBank:WP_000505788.1;Name=WP_000505788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459858.1;locus_tag=C9E95_RS09680;product=YbjO family protein;protein_id=WP_000505788.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 94136 94981 . - . ID=gene-C9E95_RS09685;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=C9E95_RS09685;old_locus_tag=C9E95_09935 NZ_PYJW01000088.1 Protein Homology CDS 94136 94981 . - 0 ID=cds-WP_001061629.1;Parent=gene-C9E95_RS09685;Dbxref=GenBank:WP_001061629.1;Name=WP_001061629.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459857.1;locus_tag=C9E95_RS09685;product=putrescine ABC transporter permease PotI;protein_id=WP_001061629.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 94978 95931 . - . ID=gene-C9E95_RS09690;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=C9E95_RS09690;old_locus_tag=C9E95_09940 NZ_PYJW01000088.1 Protein Homology CDS 94978 95931 . - 0 ID=cds-WP_000105453.1;Parent=gene-C9E95_RS09690;Dbxref=GenBank:WP_000105453.1;Name=WP_000105453.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459856.1;locus_tag=C9E95_RS09690;product=putrescine ABC transporter permease PotH;protein_id=WP_000105453.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 95941 97074 . - . ID=gene-C9E95_RS09695;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=C9E95_RS09695;old_locus_tag=C9E95_09945 NZ_PYJW01000088.1 Protein Homology CDS 95941 97074 . - 0 ID=cds-WP_001000698.1;Parent=gene-C9E95_RS09695;Dbxref=GenBank:WP_001000698.1;Name=WP_001000698.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=C9E95_RS09695;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_001000698.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 97162 98274 . - . ID=gene-C9E95_RS09700;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=C9E95_RS09700;old_locus_tag=C9E95_09950 NZ_PYJW01000088.1 Protein Homology CDS 97162 98274 . - 0 ID=cds-WP_000125769.1;Parent=gene-C9E95_RS09700;Dbxref=GenBank:WP_000125769.1;Name=WP_000125769.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459854.1;locus_tag=C9E95_RS09700;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_000125769.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 98623 99099 . - . ID=gene-C9E95_RS09705;Name=C9E95_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09705;old_locus_tag=C9E95_09955 NZ_PYJW01000088.1 Protein Homology CDS 98623 99099 . - 0 ID=cds-WP_000624811.1;Parent=gene-C9E95_RS09705;Dbxref=GenBank:WP_000624811.1;Name=WP_000624811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459853.1;locus_tag=C9E95_RS09705;product=YbjN domain-containing protein;protein_id=WP_000624811.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 99196 100098 . - . ID=gene-C9E95_RS09710;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=C9E95_RS09710;old_locus_tag=C9E95_09960 NZ_PYJW01000088.1 Protein Homology CDS 99196 100098 . - 0 ID=cds-WP_000684361.1;Parent=gene-C9E95_RS09710;Dbxref=GenBank:WP_000684361.1;Name=WP_000684361.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459852.1;locus_tag=C9E95_RS09710;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_000684361.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 100156 100878 . - . ID=gene-C9E95_RS09715;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=C9E95_RS09715;old_locus_tag=C9E95_09965 NZ_PYJW01000088.1 Protein Homology CDS 100156 100878 . - 0 ID=cds-WP_000075300.1;Parent=gene-C9E95_RS09715;Dbxref=GenBank:WP_000075300.1;Name=WP_000075300.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459851.1;locus_tag=C9E95_RS09715;product=nitroreductase NfsA;protein_id=WP_000075300.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 100862 101152 . - . ID=gene-C9E95_RS09720;Name=C9E95_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09720;old_locus_tag=C9E95_09970 NZ_PYJW01000088.1 Protein Homology CDS 100862 101152 . - 0 ID=cds-WP_039591269.1;Parent=gene-C9E95_RS09720;Dbxref=GenBank:WP_039591269.1;Name=WP_039591269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459850.1;locus_tag=C9E95_RS09720;product=YbjC family protein;protein_id=WP_039591269.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 101322 101585 . + . ID=gene-C9E95_RS09725;Name=C9E95_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09725;old_locus_tag=C9E95_09975 NZ_PYJW01000088.1 Protein Homology CDS 101322 101585 . + 0 ID=cds-WP_000495513.1;Parent=gene-C9E95_RS09725;Dbxref=GenBank:WP_000495513.1;Name=WP_000495513.1;Ontology_term=GO:0045454,GO:0009055,GO:0015035;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459849.1;locus_tag=C9E95_RS09725;product=GrxA family glutaredoxin;protein_id=WP_000495513.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 101617 101994 . - . ID=gene-C9E95_RS09730;Name=C9E95_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09730;old_locus_tag=C9E95_09980 NZ_PYJW01000088.1 Protein Homology CDS 101617 101994 . - 0 ID=cds-WP_000680850.1;Parent=gene-C9E95_RS09730;Dbxref=GenBank:WP_000680850.1;Name=WP_000680850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459848.1;locus_tag=C9E95_RS09730;product=inner membrane protein YbjM;protein_id=WP_000680850.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 102265 103950 . + . ID=gene-C9E95_RS09735;Name=C9E95_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09735;old_locus_tag=C9E95_09990 NZ_PYJW01000088.1 Protein Homology CDS 102265 103950 . + 0 ID=cds-WP_001024853.1;Parent=gene-C9E95_RS09735;Dbxref=GenBank:WP_001024853.1;Name=WP_001024853.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=C9E95_RS09735;product=aspartate:alanine antiporter;protein_id=WP_001024853.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 104067 104687 . - . ID=gene-C9E95_RS09745;Name=C9E95_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09745;old_locus_tag=C9E95_10000 NZ_PYJW01000088.1 Protein Homology CDS 104067 104687 . - 0 ID=cds-WP_000661873.1;Parent=gene-C9E95_RS09745;Dbxref=GenBank:WP_000661873.1;Name=WP_000661873.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459846.1;locus_tag=C9E95_RS09745;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000661873.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 104855 106066 . + . ID=gene-C9E95_RS09750;Name=C9E95_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09750;old_locus_tag=C9E95_10005 NZ_PYJW01000088.1 Protein Homology CDS 104855 106066 . + 0 ID=cds-WP_000217420.1;Parent=gene-C9E95_RS09750;Dbxref=GenBank:WP_000217420.1;Name=WP_000217420.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459845.1;locus_tag=C9E95_RS09750;product=MFS transporter;protein_id=WP_000217420.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 106063 106878 . + . ID=gene-C9E95_RS09755;Name=C9E95_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09755;old_locus_tag=C9E95_10010 NZ_PYJW01000088.1 Protein Homology CDS 106063 106878 . + 0 ID=cds-WP_079986832.1;Parent=gene-C9E95_RS09755;Dbxref=GenBank:WP_079986832.1;Name=WP_079986832.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459844.1;locus_tag=C9E95_RS09755;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_079986832.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 106932 108164 . - . ID=gene-C9E95_RS09760;Name=C9E95_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09760;old_locus_tag=C9E95_10015 NZ_PYJW01000088.1 Protein Homology CDS 106932 108164 . - 0 ID=cds-WP_001181284.1;Parent=gene-C9E95_RS09760;Dbxref=GenBank:WP_001181284.1;Name=WP_001181284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459843.1;locus_tag=C9E95_RS09760;product=MFS transporter;protein_id=WP_001181284.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 108477 109085 . + . ID=gene-C9E95_RS09765;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=C9E95_RS09765;old_locus_tag=C9E95_10020 NZ_PYJW01000088.1 Protein Homology CDS 108477 109085 . + 0 ID=cds-WP_023181381.1;Parent=gene-C9E95_RS09765;Dbxref=GenBank:WP_023181381.1;Name=WP_023181381.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459842.1;locus_tag=C9E95_RS09765;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_023181381.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 109157 109915 . + . ID=gene-C9E95_RS09770;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=C9E95_RS09770;old_locus_tag=C9E95_10025 NZ_PYJW01000088.1 Protein Homology CDS 109157 109915 . + 0 ID=cds-WP_000450104.1;Parent=gene-C9E95_RS09770;Dbxref=GenBank:WP_000450104.1;Name=WP_000450104.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459841.1;locus_tag=C9E95_RS09770;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_000450104.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 109960 111162 . - . ID=gene-C9E95_RS09775;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=C9E95_RS09775;old_locus_tag=C9E95_10030 NZ_PYJW01000088.1 Protein Homology CDS 109960 111162 . - 0 ID=cds-WP_000195712.1;Parent=gene-C9E95_RS09775;Dbxref=GenBank:WP_000195712.1;Name=WP_000195712.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459840.1;locus_tag=C9E95_RS09775;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_000195712.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 111406 112032 . + . ID=gene-C9E95_RS09780;Name=C9E95_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09780;old_locus_tag=C9E95_10035 NZ_PYJW01000088.1 Protein Homology CDS 111406 112032 . + 0 ID=cds-WP_000631907.1;Parent=gene-C9E95_RS09780;Dbxref=GenBank:WP_000631907.1;Name=WP_000631907.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459839.1;locus_tag=C9E95_RS09780;product=glutathione S-transferase family protein;protein_id=WP_000631907.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 112029 112556 . - . ID=gene-C9E95_RS09785;Name=C9E95_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09785;old_locus_tag=C9E95_10040 NZ_PYJW01000088.1 Protein Homology CDS 112029 112556 . - 0 ID=cds-WP_371063368.1;Parent=gene-C9E95_RS09785;Dbxref=GenBank:WP_371063368.1;Name=WP_371063368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252732.1;locus_tag=C9E95_RS09785;product=PQQ-dependent sugar dehydrogenase;protein_id=WP_371063368.1;transl_table=11 NZ_PYJW01000088.1 RefSeq pseudogene 112617 112712 . - . ID=gene-C9E95_RS23725;Name=C9E95_RS23725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23725;partial=true;pseudo=true;start_range=.,112617 NZ_PYJW01000088.1 Protein Homology CDS 112617 112712 . - 0 ID=cds-C9E95_RS23725;Parent=gene-C9E95_RS23725;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF015750.6;locus_tag=C9E95_RS23725;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,112617;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 113056 113481 . + . ID=gene-C9E95_RS09790;Name=C9E95_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09790;old_locus_tag=C9E95_10045 NZ_PYJW01000088.1 Protein Homology CDS 113056 113481 . + 0 ID=cds-WP_000287110.1;Parent=gene-C9E95_RS09790;Dbxref=GenBank:WP_000287110.1;Name=WP_000287110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459837.1;locus_tag=C9E95_RS09790;product=GntP family permease;protein_id=WP_000287110.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 113746 114636 . + . ID=gene-C9E95_RS09795;Name=C9E95_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09795;old_locus_tag=C9E95_10050 NZ_PYJW01000088.1 Protein Homology CDS 113746 114636 . + 0 ID=cds-WP_000545335.1;Parent=gene-C9E95_RS09795;Dbxref=GenBank:WP_000545335.1;Name=WP_000545335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459836.1;locus_tag=C9E95_RS09795;product=LysR family transcriptional regulator;protein_id=WP_000545335.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 114642 116327 . - . ID=gene-C9E95_RS09800;Name=C9E95_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09800;old_locus_tag=C9E95_10055 NZ_PYJW01000088.1 Protein Homology CDS 114642 116327 . - 0 ID=cds-WP_001000306.1;Parent=gene-C9E95_RS09800;Dbxref=GenBank:WP_001000306.1;Name=WP_001000306.1;Ontology_term=GO:0022900,GO:0004174,GO:0046872,GO:0051539;gbkey=CDS;go_function=electron-transferring-flavoprotein dehydrogenase activity|0004174||IEA,metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459835.1;locus_tag=C9E95_RS09800;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=WP_001000306.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 116776 117939 . - . ID=gene-C9E95_RS09810;Name=C9E95_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09810;old_locus_tag=C9E95_10065 NZ_PYJW01000088.1 Protein Homology CDS 116776 117939 . - 0 ID=cds-WP_000835399.1;Parent=gene-C9E95_RS09810;Dbxref=GenBank:WP_000835399.1;Name=WP_000835399.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459834.1;locus_tag=C9E95_RS09810;product=acyl-CoA dehydrogenase family protein;protein_id=WP_000835399.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 118003 118200 . - . ID=gene-C9E95_RS23180;Name=C9E95_RS23180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23180;old_locus_tag=C9E95_10070 NZ_PYJW01000088.1 GeneMarkS-2+ CDS 118003 118200 . - 0 ID=cds-WP_001200424.1;Parent=gene-C9E95_RS23180;Dbxref=GenBank:WP_001200424.1;Name=WP_001200424.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS23180;product=hypothetical protein;protein_id=WP_001200424.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 118233 119180 . - . ID=gene-C9E95_RS09820;Name=C9E95_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09820;old_locus_tag=C9E95_10075 NZ_PYJW01000088.1 Protein Homology CDS 118233 119180 . - 0 ID=cds-WP_000157776.1;Parent=gene-C9E95_RS09820;Dbxref=GenBank:WP_000157776.1;Name=WP_000157776.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459833.1;locus_tag=C9E95_RS09820;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_000157776.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 119191 119940 . - . ID=gene-C9E95_RS09825;Name=C9E95_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09825;old_locus_tag=C9E95_10080 NZ_PYJW01000088.1 Protein Homology CDS 119191 119940 . - 0 ID=cds-WP_001521753.1;Parent=gene-C9E95_RS09825;Dbxref=GenBank:WP_001521753.1;Name=WP_001521753.1;Ontology_term=GO:0009055;gbkey=CDS;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002949615.1;locus_tag=C9E95_RS09825;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_001521753.1;transl_table=11 NZ_PYJW01000088.1 RefSeq gene 119963 120478 . - . ID=gene-C9E95_RS09830;Name=C9E95_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09830;old_locus_tag=C9E95_10085 NZ_PYJW01000088.1 Protein Homology CDS 119963 120478 . - 0 ID=cds-WP_001521476.1;Parent=gene-C9E95_RS09830;Dbxref=GenBank:WP_001521476.1;Name=WP_001521476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459831.1;locus_tag=C9E95_RS09830;product=STM0854 family CoA ester lyase;protein_id=WP_001521476.1;transl_table=11 ##sequence-region NZ_PYJW01000004.1 1 43645 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000004.1 RefSeq region 1 43645 . + . ID=NZ_PYJW01000004.1:1..43645;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000004.1 RefSeq gene 149 1582 . - . ID=gene-C9E95_RS00190;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=C9E95_RS00190;old_locus_tag=C9E95_00185 NZ_PYJW01000004.1 Protein Homology CDS 149 1582 . - 0 ID=cds-WP_023195695.1;Parent=gene-C9E95_RS00190;Dbxref=GenBank:WP_023195695.1;Name=WP_023195695.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462211.1;locus_tag=C9E95_RS00190;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_023195695.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 1830 2306 . + . ID=gene-C9E95_RS00195;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=C9E95_RS00195;old_locus_tag=C9E95_00190 NZ_PYJW01000004.1 Protein Homology CDS 1830 2306 . + 0 ID=cds-WP_001148008.1;Parent=gene-C9E95_RS00195;Dbxref=GenBank:WP_001148008.1;Name=WP_001148008.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=C9E95_RS00195;product=transcription elongation factor GreA;protein_id=WP_001148008.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 2462 2755 . - . ID=gene-C9E95_RS00200;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=C9E95_RS00200;old_locus_tag=C9E95_00195 NZ_PYJW01000004.1 Protein Homology CDS 2462 2755 . - 0 ID=cds-WP_001592995.1;Parent=gene-C9E95_RS00200;Dbxref=GenBank:WP_001592995.1;Name=WP_001592995.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=C9E95_RS00200;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001592995.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 2882 3508 . + . ID=gene-C9E95_RS00205;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=C9E95_RS00205;old_locus_tag=C9E95_00200 NZ_PYJW01000004.1 Protein Homology CDS 2882 3508 . + 0 ID=cds-WP_000145974.1;Parent=gene-C9E95_RS00205;Dbxref=GenBank:WP_000145974.1;Name=WP_000145974.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462208.1;locus_tag=C9E95_RS00205;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_000145974.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 3612 5546 . + . ID=gene-C9E95_RS00210;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=C9E95_RS00210;old_locus_tag=C9E95_00210 NZ_PYJW01000004.1 Protein Homology CDS 3612 5546 . + 0 ID=cds-WP_001107481.1;Parent=gene-C9E95_RS00210;Dbxref=GenBank:WP_001107481.1;Name=WP_001107481.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=C9E95_RS00210;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001107481.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 5651 6499 . + . ID=gene-C9E95_RS00215;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=C9E95_RS00215;old_locus_tag=C9E95_00215 NZ_PYJW01000004.1 Protein Homology CDS 5651 6499 . + 0 ID=cds-WP_080203814.1;Parent=gene-C9E95_RS00215;Dbxref=GenBank:WP_080203814.1;Name=WP_080203814.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462206.1;locus_tag=C9E95_RS00215;product=dihydropteroate synthase;protein_id=WP_080203814.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 6492 7829 . + . ID=gene-C9E95_RS00220;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=C9E95_RS00220;old_locus_tag=C9E95_00220 NZ_PYJW01000004.1 Protein Homology CDS 6492 7829 . + 0 ID=cds-WP_080203815.1;Parent=gene-C9E95_RS00220;Dbxref=GenBank:WP_080203815.1;Name=WP_080203815.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462205.1;locus_tag=C9E95_RS00220;product=phosphoglucosamine mutase;protein_id=WP_080203815.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 8052 8384 . + . ID=gene-C9E95_RS00225;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=C9E95_RS00225;old_locus_tag=C9E95_00225 NZ_PYJW01000004.1 Protein Homology CDS 8052 8384 . + 0 ID=cds-WP_000272680.1;Parent=gene-C9E95_RS00225;Dbxref=GenBank:WP_000272680.1;Name=WP_000272680.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462204.1;locus_tag=C9E95_RS00225;product=preprotein translocase subunit SecG;protein_id=WP_000272680.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 8398 8484 . + . ID=gene-C9E95_RS00230;Name=C9E95_RS00230;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS00230;old_locus_tag=C9E95_00230 NZ_PYJW01000004.1 tRNAscan-SE tRNA 8398 8484 . + . ID=rna-C9E95_RS00230;Parent=gene-C9E95_RS00230;anticodon=(pos:8432..8434);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS00230;product=tRNA-Leu NZ_PYJW01000004.1 tRNAscan-SE exon 8398 8484 . + . ID=exon-C9E95_RS00230-1;Parent=rna-C9E95_RS00230;anticodon=(pos:8432..8434);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS00230;product=tRNA-Leu NZ_PYJW01000004.1 RefSeq gene 8682 10025 . - . ID=gene-C9E95_RS00235;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=C9E95_RS00235;old_locus_tag=C9E95_00235 NZ_PYJW01000004.1 Protein Homology CDS 8682 10025 . - 0 ID=cds-WP_000207645.1;Parent=gene-C9E95_RS00235;Dbxref=GenBank:WP_000207645.1;Name=WP_000207645.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=C9E95_RS00235;product=argininosuccinate synthase;protein_id=WP_000207645.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 10369 10445 . + . ID=gene-C9E95_RS00240;Name=C9E95_RS00240;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS00240;old_locus_tag=C9E95_00240 NZ_PYJW01000004.1 tRNAscan-SE tRNA 10369 10445 . + . ID=rna-C9E95_RS00240;Parent=gene-C9E95_RS00240;anticodon=(pos:10403..10405);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS00240;product=tRNA-Met NZ_PYJW01000004.1 tRNAscan-SE exon 10369 10445 . + . ID=exon-C9E95_RS00240-1;Parent=rna-C9E95_RS00240;anticodon=(pos:10403..10405);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS00240;product=tRNA-Met NZ_PYJW01000004.1 RefSeq gene 10653 11105 . + . ID=gene-C9E95_RS00245;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=C9E95_RS00245;old_locus_tag=C9E95_00245 NZ_PYJW01000004.1 Protein Homology CDS 10653 11105 . + 0 ID=cds-WP_000105461.1;Parent=gene-C9E95_RS00245;Dbxref=GenBank:WP_000105461.1;Name=WP_000105461.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=C9E95_RS00245;product=ribosome maturation factor RimP;protein_id=WP_000105461.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 11133 12635 . + . ID=gene-C9E95_RS00250;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=C9E95_RS00250;old_locus_tag=C9E95_00250 NZ_PYJW01000004.1 Protein Homology CDS 11133 12635 . + 0 ID=cds-WP_001031038.1;Parent=gene-C9E95_RS00250;Dbxref=GenBank:WP_001031038.1;Name=WP_001031038.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=C9E95_RS00250;product=transcription termination factor NusA;protein_id=WP_001031038.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 12660 15338 . + . ID=gene-C9E95_RS00255;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=C9E95_RS00255;old_locus_tag=C9E95_00255 NZ_PYJW01000004.1 Protein Homology CDS 12660 15338 . + 0 ID=cds-WP_000133064.1;Parent=gene-C9E95_RS00255;Dbxref=GenBank:WP_000133064.1;Name=WP_000133064.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462199.1;locus_tag=C9E95_RS00255;product=translation initiation factor IF-2;protein_id=WP_000133064.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 15559 15960 . + . ID=gene-C9E95_RS00260;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=C9E95_RS00260;old_locus_tag=C9E95_00260 NZ_PYJW01000004.1 Protein Homology CDS 15559 15960 . + 0 ID=cds-WP_001040199.1;Parent=gene-C9E95_RS00260;Dbxref=GenBank:WP_001040199.1;Name=WP_001040199.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=C9E95_RS00260;product=30S ribosome-binding factor RbfA;protein_id=WP_001040199.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 15960 16904 . + . ID=gene-C9E95_RS00265;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=C9E95_RS00265;old_locus_tag=C9E95_00265 NZ_PYJW01000004.1 Protein Homology CDS 15960 16904 . + 0 ID=cds-WP_080203816.1;Parent=gene-C9E95_RS00265;Dbxref=GenBank:WP_080203816.1;Name=WP_080203816.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462197.1;locus_tag=C9E95_RS00265;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_080203816.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 17055 17324 . + . ID=gene-C9E95_RS00270;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=C9E95_RS00270;old_locus_tag=C9E95_00270 NZ_PYJW01000004.1 Protein Homology CDS 17055 17324 . + 0 ID=cds-WP_000059465.1;Parent=gene-C9E95_RS00270;Dbxref=GenBank:WP_000059465.1;Name=WP_000059465.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=C9E95_RS00270;product=30S ribosomal protein S15;protein_id=WP_000059465.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 17566 19701 . + . ID=gene-C9E95_RS00275;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=C9E95_RS00275;old_locus_tag=C9E95_00275 NZ_PYJW01000004.1 Protein Homology CDS 17566 19701 . + 0 ID=cds-WP_001670767.1;Parent=gene-C9E95_RS00275;Dbxref=GenBank:WP_001670767.1;Name=WP_001670767.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462195.1;locus_tag=C9E95_RS00275;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_001670767.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 19811 20695 . + . ID=gene-C9E95_RS00280;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=C9E95_RS00280;old_locus_tag=C9E95_00280 NZ_PYJW01000004.1 Protein Homology CDS 19811 20695 . + 0 ID=cds-WP_000802069.1;Parent=gene-C9E95_RS00280;Dbxref=GenBank:WP_000802069.1;Name=WP_000802069.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=C9E95_RS00280;product=lipoprotein NlpI;protein_id=WP_000802069.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 20801 20881 . + . ID=gene-C9E95_RS00285;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=C9E95_RS00285 NZ_PYJW01000004.1 Protein Homology CDS 20801 20881 . + 0 ID=cds-WP_010723222.1;Parent=gene-C9E95_RS00285;Dbxref=GenBank:WP_010723222.1;Name=WP_010723222.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=C9E95_RS00285;product=protein YrbN;protein_id=WP_010723222.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 20874 22763 . + . ID=gene-C9E95_RS00290;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=C9E95_RS00290;old_locus_tag=C9E95_00285 NZ_PYJW01000004.1 Protein Homology CDS 20874 22763 . + 0 ID=cds-WP_000807248.1;Parent=gene-C9E95_RS00290;Dbxref=GenBank:WP_000807248.1;Name=WP_000807248.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312070.2;locus_tag=C9E95_RS00290;product=ATP-dependent RNA helicase DeaD;protein_id=WP_000807248.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 22917 24161 . + . ID=gene-C9E95_RS00295;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=C9E95_RS00295;old_locus_tag=C9E95_00290 NZ_PYJW01000004.1 Protein Homology CDS 22917 24161 . + 0 ID=cds-WP_080203817.1;Parent=gene-C9E95_RS00295;Dbxref=GenBank:WP_080203817.1;Name=WP_080203817.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462192.1;locus_tag=C9E95_RS00295;product=tryptophan permease;protein_id=WP_080203817.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 24250 25257 . - . ID=gene-C9E95_RS00300;Name=C9E95_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00300;old_locus_tag=C9E95_00295 NZ_PYJW01000004.1 Protein Homology CDS 24250 25257 . - 0 ID=cds-WP_023994016.1;Parent=gene-C9E95_RS00300;Dbxref=GenBank:WP_023994016.1;Name=WP_023994016.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462189.1;locus_tag=C9E95_RS00300;product=luciferase-like monooxygenase;protein_id=WP_023994016.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 25435 26313 . - . ID=gene-C9E95_RS00305;Name=C9E95_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00305;old_locus_tag=C9E95_00300 NZ_PYJW01000004.1 Protein Homology CDS 25435 26313 . - 0 ID=cds-WP_023994017.1;Parent=gene-C9E95_RS00305;Dbxref=GenBank:WP_023994017.1;Name=WP_023994017.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312067.2;locus_tag=C9E95_RS00305;product=U32 family peptidase;protein_id=WP_023994017.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 26322 27317 . - . ID=gene-C9E95_RS00310;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=C9E95_RS00310;old_locus_tag=C9E95_00305 NZ_PYJW01000004.1 Protein Homology CDS 26322 27317 . - 0 ID=cds-WP_000421309.1;Parent=gene-C9E95_RS00310;Dbxref=GenBank:WP_000421309.1;Name=WP_000421309.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=C9E95_RS00310;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_000421309.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 27534 28058 . + . ID=gene-C9E95_RS00315;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=C9E95_RS00315;old_locus_tag=C9E95_00310 NZ_PYJW01000004.1 Protein Homology CDS 27534 28058 . + 0 ID=cds-WP_000884721.1;Parent=gene-C9E95_RS00315;Dbxref=GenBank:WP_000884721.1;Name=WP_000884721.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462186.1;locus_tag=C9E95_RS00315;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_000884721.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 28052 28555 . + . ID=gene-C9E95_RS00320;Name=C9E95_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00320;old_locus_tag=C9E95_00315 NZ_PYJW01000004.1 Protein Homology CDS 28052 28555 . + 0 ID=cds-WP_000908562.1;Parent=gene-C9E95_RS00320;Dbxref=GenBank:WP_000908562.1;Name=WP_000908562.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462185.1;locus_tag=C9E95_RS00320;product=GNAT family N-acetyltransferase;protein_id=WP_000908562.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 28542 28859 . - . ID=gene-C9E95_RS00325;Name=C9E95_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00325;old_locus_tag=C9E95_00320 NZ_PYJW01000004.1 Protein Homology CDS 28542 28859 . - 0 ID=cds-WP_000928379.1;Parent=gene-C9E95_RS00325;Dbxref=GenBank:WP_000928379.1;Name=WP_000928379.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462184.3;locus_tag=C9E95_RS00325;product=GIY-YIG nuclease family protein;protein_id=WP_000928379.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 28897 29340 . + . ID=gene-C9E95_RS00330;Name=C9E95_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00330;old_locus_tag=C9E95_00325 NZ_PYJW01000004.1 Protein Homology CDS 28897 29340 . + 0 ID=cds-WP_000380404.1;Parent=gene-C9E95_RS00330;Dbxref=GenBank:WP_000380404.1;Name=WP_000380404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462183.1;locus_tag=C9E95_RS00330;product=YhbP family protein;protein_id=WP_000380404.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 29320 29838 . - . ID=gene-C9E95_RS00335;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=C9E95_RS00335;old_locus_tag=C9E95_00330 NZ_PYJW01000004.1 Protein Homology CDS 29320 29838 . - 0 ID=cds-WP_000037599.1;Parent=gene-C9E95_RS00335;Dbxref=GenBank:WP_000037599.1;Name=WP_000037599.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462182.1;locus_tag=C9E95_RS00335;product=protein/nucleic acid deglycase;protein_id=WP_000037599.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 29969 30604 . + . ID=gene-C9E95_RS00340;Name=C9E95_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00340;old_locus_tag=C9E95_00335 NZ_PYJW01000004.1 Protein Homology CDS 29969 30604 . + 0 ID=cds-WP_023994018.1;Parent=gene-C9E95_RS00340;Dbxref=GenBank:WP_023994018.1;Name=WP_023994018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084527.1;locus_tag=C9E95_RS00340;product=NAD(P)H-binding protein;protein_id=WP_023994018.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 30671 31246 . - . ID=gene-C9E95_RS00345;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=C9E95_RS00345;old_locus_tag=C9E95_00340 NZ_PYJW01000004.1 Protein Homology CDS 30671 31246 . - 0 ID=cds-WP_000643280.1;Parent=gene-C9E95_RS00345;Dbxref=GenBank:WP_000643280.1;Name=WP_000643280.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462180.1;locus_tag=C9E95_RS00345;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_000643280.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 31256 31846 . - . ID=gene-C9E95_RS00350;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=C9E95_RS00350;old_locus_tag=C9E95_00345 NZ_PYJW01000004.1 Protein Homology CDS 31256 31846 . - 0 ID=cds-WP_000893481.1;Parent=gene-C9E95_RS00350;Dbxref=GenBank:WP_000893481.1;Name=WP_000893481.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462179.1;locus_tag=C9E95_RS00350;product=DnaA initiator-associating protein DiaA;protein_id=WP_000893481.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 31868 32263 . - . ID=gene-C9E95_RS00355;Name=C9E95_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00355;old_locus_tag=C9E95_00350 NZ_PYJW01000004.1 Protein Homology CDS 31868 32263 . - 0 ID=cds-WP_023994019.1;Parent=gene-C9E95_RS00355;Dbxref=GenBank:WP_023994019.1;Name=WP_023994019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462178.1;locus_tag=C9E95_RS00355;product=YraN family protein;protein_id=WP_023994019.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 32221 34263 . - . ID=gene-C9E95_RS00360;Name=C9E95_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00360;old_locus_tag=C9E95_00355 NZ_PYJW01000004.1 Protein Homology CDS 32221 34263 . - 0 ID=cds-WP_135369791.1;Parent=gene-C9E95_RS00360;Dbxref=GenBank:WP_135369791.1;Name=WP_135369791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=C9E95_RS00360;product=penicillin-binding protein activator;protein_id=WP_135369791.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 34327 35190 . + . ID=gene-C9E95_RS00365;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=C9E95_RS00365;old_locus_tag=C9E95_00360 NZ_PYJW01000004.1 Protein Homology CDS 34327 35190 . + 0 ID=cds-WP_000812288.1;Parent=gene-C9E95_RS00365;Dbxref=GenBank:WP_000812288.1;Name=WP_000812288.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462176.1;locus_tag=C9E95_RS00365;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_000812288.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 35348 36121 . - . ID=gene-C9E95_RS00370;Name=C9E95_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00370;old_locus_tag=C9E95_00365 NZ_PYJW01000004.1 Protein Homology CDS 35348 36121 . - 0 ID=cds-WP_001083899.1;Parent=gene-C9E95_RS00370;Dbxref=GenBank:WP_001083899.1;Name=WP_001083899.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462175.1;locus_tag=C9E95_RS00370;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001083899.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 36232 37275 . - . ID=gene-C9E95_RS00375;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=C9E95_RS00375;old_locus_tag=C9E95_00370 NZ_PYJW01000004.1 Protein Homology CDS 36232 37275 . - 0 ID=cds-WP_000844174.1;Parent=gene-C9E95_RS00375;Dbxref=GenBank:WP_000844174.1;Name=WP_000844174.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462174.1;locus_tag=C9E95_RS00375;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_000844174.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 37319 38692 . - . ID=gene-C9E95_RS00380;Name=C9E95_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00380;old_locus_tag=C9E95_00375 NZ_PYJW01000004.1 Protein Homology CDS 37319 38692 . - 0 ID=cds-WP_000490601.1;Parent=gene-C9E95_RS00380;Dbxref=GenBank:WP_000490601.1;Name=WP_000490601.1;Ontology_term=GO:0009401,GO:0015796,GO:0015577,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=galactitol transmembrane transporter activity|0015577||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,galactitol transmembrane transport|0015796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462173.1;locus_tag=C9E95_RS00380;product=galactitol-specific PTS transporter subunit IIC;protein_id=WP_000490601.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 38696 38980 . - . ID=gene-C9E95_RS00385;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=C9E95_RS00385;old_locus_tag=C9E95_00380 NZ_PYJW01000004.1 Protein Homology CDS 38696 38980 . - 0 ID=cds-WP_000824293.1;Parent=gene-C9E95_RS00385;Dbxref=GenBank:WP_000824293.1;Name=WP_000824293.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462172.1;locus_tag=C9E95_RS00385;product=PTS galactitol transporter subunit IIB;protein_id=WP_000824293.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 39011 39475 . - . ID=gene-C9E95_RS00390;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=C9E95_RS00390;old_locus_tag=C9E95_00385 NZ_PYJW01000004.1 Protein Homology CDS 39011 39475 . - 0 ID=cds-WP_000080445.1;Parent=gene-C9E95_RS00390;Dbxref=GenBank:WP_000080445.1;Name=WP_000080445.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462171.1;locus_tag=C9E95_RS00390;product=PTS galactitol transporter subunit IIA;protein_id=WP_000080445.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 39490 40761 . - . ID=gene-C9E95_RS00395;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=C9E95_RS00395;old_locus_tag=C9E95_00390 NZ_PYJW01000004.1 Protein Homology CDS 39490 40761 . - 0 ID=cds-WP_023994020.1;Parent=gene-C9E95_RS00395;Dbxref=GenBank:WP_023994020.1;Name=WP_023994020.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462170.1;locus_tag=C9E95_RS00395;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WP_023994020.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 40881 41735 . - . ID=gene-C9E95_RS00400;Name=C9E95_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00400;old_locus_tag=C9E95_00395 NZ_PYJW01000004.1 Protein Homology CDS 40881 41735 . - 0 ID=cds-WP_023994021.1;Parent=gene-C9E95_RS00400;Dbxref=GenBank:WP_023994021.1;Name=WP_023994021.1;Ontology_term=GO:0005975,GO:0008270,GO:0009025;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462166.1;locus_tag=C9E95_RS00400;product=tagatose bisphosphate family class II aldolase;protein_id=WP_023994021.1;transl_table=11 NZ_PYJW01000004.1 RefSeq gene 41993 43564 . - . ID=gene-C9E95_RS00405;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=C9E95_RS00405;old_locus_tag=C9E95_00400 NZ_PYJW01000004.1 Protein Homology CDS 41993 43564 . - 0 ID=cds-WP_001273722.1;Parent=gene-C9E95_RS00405;Dbxref=GenBank:WP_001273722.1;Name=WP_001273722.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462163.1;locus_tag=C9E95_RS00405;product=galactarate dehydratase;protein_id=WP_001273722.1;transl_table=11 ##sequence-region NZ_PYJW01000127.1 1 40877 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000127.1 RefSeq region 1 40877 . + . ID=NZ_PYJW01000127.1:1..40877;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000127.1 RefSeq pseudogene 1 141 . - . ID=gene-C9E95_RS23510;Name=C9E95_RS23510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23510;partial=true;pseudo=true;start_range=.,1 NZ_PYJW01000127.1 Protein Homology CDS 1 141 . - 0 ID=cds-C9E95_RS23510;Parent=gene-C9E95_RS23510;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461824.1;locus_tag=C9E95_RS23510;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_PYJW01000127.1 RefSeq pseudogene 382 560 . + . ID=gene-C9E95_RS13440;Name=C9E95_RS13440;end_range=560,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS13440;old_locus_tag=C9E95_13780;partial=true;pseudo=true NZ_PYJW01000127.1 Protein Homology CDS 382 560 . + 0 ID=cds-C9E95_RS13440;Parent=gene-C9E95_RS13440;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=560,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612101.1;locus_tag=C9E95_RS13440;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 830 1120 . + . ID=gene-C9E95_RS13445;Name=C9E95_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13445;old_locus_tag=C9E95_13785 NZ_PYJW01000127.1 Protein Homology CDS 830 1120 . + 0 ID=cds-WP_000855694.1;Parent=gene-C9E95_RS13445;Dbxref=GenBank:WP_000855694.1;Name=WP_000855694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461825.1;locus_tag=C9E95_RS13445;product=DUF1778 domain-containing protein;protein_id=WP_000855694.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 1117 1644 . + . ID=gene-C9E95_RS13450;Name=C9E95_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13450;old_locus_tag=C9E95_13790 NZ_PYJW01000127.1 Protein Homology CDS 1117 1644 . + 0 ID=cds-WP_000971649.1;Parent=gene-C9E95_RS13450;Dbxref=GenBank:WP_000971649.1;Name=WP_000971649.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461826.1;locus_tag=C9E95_RS13450;product=GNAT family N-acetyltransferase;protein_id=WP_000971649.1;transl_table=11 NZ_PYJW01000127.1 RefSeq pseudogene 1717 1931 . - . ID=gene-C9E95_RS13455;Name=C9E95_RS13455;end_range=1931,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS13455;old_locus_tag=C9E95_13795;partial=true;pseudo=true NZ_PYJW01000127.1 Protein Homology CDS 1717 1931 . - 0 ID=cds-C9E95_RS13455;Parent=gene-C9E95_RS13455;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1931,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011791210.1;locus_tag=C9E95_RS13455;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 2269 2925 . + . ID=gene-C9E95_RS13460;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=C9E95_RS13460;old_locus_tag=C9E95_13800 NZ_PYJW01000127.1 Protein Homology CDS 2269 2925 . + 0 ID=cds-WP_000420452.1;Parent=gene-C9E95_RS13460;Dbxref=GenBank:WP_000420452.1;Name=WP_000420452.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461828.1;locus_tag=C9E95_RS13460;product=protein-serine/threonine phosphatase;protein_id=WP_000420452.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 3097 3618 . - . ID=gene-C9E95_RS13465;Name=C9E95_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13465;old_locus_tag=C9E95_13805 NZ_PYJW01000127.1 Protein Homology CDS 3097 3618 . - 0 ID=cds-WP_000858988.1;Parent=gene-C9E95_RS13465;Dbxref=GenBank:WP_000858988.1;Name=WP_000858988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=C9E95_RS13465;product=hypothetical protein;protein_id=WP_000858988.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 3777 6344 . + . ID=gene-C9E95_RS13470;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=C9E95_RS13470;old_locus_tag=C9E95_13810 NZ_PYJW01000127.1 Protein Homology CDS 3777 6344 . + 0 ID=cds-WP_001005807.1;Parent=gene-C9E95_RS13470;Dbxref=GenBank:WP_001005807.1;Name=WP_001005807.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461830.1;locus_tag=C9E95_RS13470;product=DNA mismatch repair protein MutS;protein_id=WP_001005807.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 6400 6780 . - . ID=gene-C9E95_RS13475;Name=C9E95_RS13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13475;old_locus_tag=C9E95_13815 NZ_PYJW01000127.1 Protein Homology CDS 6400 6780 . - 0 ID=cds-WP_001070479.1;Parent=gene-C9E95_RS13475;Dbxref=GenBank:WP_001070479.1;Name=WP_001070479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=C9E95_RS13475;product=DUF4440 domain-containing protein;protein_id=WP_001070479.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 6777 7985 . - . ID=gene-C9E95_RS13480;Name=C9E95_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13480;old_locus_tag=C9E95_13820 NZ_PYJW01000127.1 Protein Homology CDS 6777 7985 . - 0 ID=cds-WP_000222406.1;Parent=gene-C9E95_RS13480;Dbxref=GenBank:WP_000222406.1;Name=WP_000222406.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461832.1;locus_tag=C9E95_RS13480;product=MFS transporter;protein_id=WP_000222406.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 8073 9005 . + . ID=gene-C9E95_RS13485;Name=C9E95_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13485;old_locus_tag=C9E95_13825 NZ_PYJW01000127.1 Protein Homology CDS 8073 9005 . + 0 ID=cds-WP_000216297.1;Parent=gene-C9E95_RS13485;Dbxref=GenBank:WP_000216297.1;Name=WP_000216297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461833.1;locus_tag=C9E95_RS13485;product=LysR family transcriptional regulator;protein_id=WP_000216297.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 9047 10543 . - . ID=gene-C9E95_RS13490;Name=C9E95_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13490;old_locus_tag=C9E95_13830 NZ_PYJW01000127.1 Protein Homology CDS 9047 10543 . - 0 ID=cds-WP_000202725.1;Parent=gene-C9E95_RS13490;Dbxref=GenBank:WP_000202725.1;Name=WP_000202725.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461834.1;locus_tag=C9E95_RS13490;product=GntP family permease;protein_id=WP_000202725.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 10540 11490 . - . ID=gene-C9E95_RS13495;Name=denD;gbkey=Gene;gene=denD;gene_biotype=protein_coding;locus_tag=C9E95_RS13495;old_locus_tag=C9E95_13835 NZ_PYJW01000127.1 Protein Homology CDS 10540 11490 . - 0 ID=cds-WP_001165731.1;Parent=gene-C9E95_RS13495;Dbxref=GenBank:WP_001165731.1;Name=WP_001165731.1;Ontology_term=GO:0005975,GO:0016491;gbkey=CDS;gene=denD;go_function=oxidoreductase activity|0016491||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461835.1;locus_tag=C9E95_RS13495;product=D-erythronate dehydrogenase;protein_id=WP_001165731.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 11530 12306 . - . ID=gene-C9E95_RS13500;Name=C9E95_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13500;old_locus_tag=C9E95_13840 NZ_PYJW01000127.1 Protein Homology CDS 11530 12306 . - 0 ID=cds-WP_001136887.1;Parent=gene-C9E95_RS13500;Dbxref=GenBank:WP_001136887.1;Name=WP_001136887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461836.1;locus_tag=C9E95_RS13500;product=HPr family phosphocarrier protein;protein_id=WP_001136887.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 12311 12949 . - . ID=gene-C9E95_RS13505;Name=C9E95_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13505;old_locus_tag=C9E95_13845 NZ_PYJW01000127.1 Protein Homology CDS 12311 12949 . - 0 ID=cds-WP_000153636.1;Parent=gene-C9E95_RS13505;Dbxref=GenBank:WP_000153636.1;Name=WP_000153636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461837.1;locus_tag=C9E95_RS13505;product=aldolase;protein_id=WP_000153636.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 12946 14208 . - . ID=gene-C9E95_RS13510;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=C9E95_RS13510;old_locus_tag=C9E95_13850 NZ_PYJW01000127.1 Protein Homology CDS 12946 14208 . - 0 ID=cds-WP_000912500.1;Parent=gene-C9E95_RS13510;Dbxref=GenBank:WP_000912500.1;Name=WP_000912500.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461838.1;locus_tag=C9E95_RS13510;product=3-oxo-tetronate kinase;protein_id=WP_000912500.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 14202 15125 . - . ID=gene-C9E95_RS13515;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=C9E95_RS13515;old_locus_tag=C9E95_13855 NZ_PYJW01000127.1 Protein Homology CDS 14202 15125 . - 0 ID=cds-WP_000206951.1;Parent=gene-C9E95_RS13515;Dbxref=GenBank:WP_000206951.1;Name=WP_000206951.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461839.1;locus_tag=C9E95_RS13515;product=L-threonate dehydrogenase;protein_id=WP_000206951.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 15322 16086 . + . ID=gene-C9E95_RS13520;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=C9E95_RS13520;old_locus_tag=C9E95_13860 NZ_PYJW01000127.1 Protein Homology CDS 15322 16086 . + 0 ID=cds-WP_000613184.1;Parent=gene-C9E95_RS13520;Dbxref=GenBank:WP_000613184.1;Name=WP_000613184.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461840.1;locus_tag=C9E95_RS13520;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_000613184.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 16105 16509 . - . ID=gene-C9E95_RS13525;Name=C9E95_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13525;old_locus_tag=C9E95_13865 NZ_PYJW01000127.1 Protein Homology CDS 16105 16509 . - 0 ID=cds-WP_000423338.1;Parent=gene-C9E95_RS13525;Dbxref=GenBank:WP_000423338.1;Name=WP_000423338.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461841.1;locus_tag=C9E95_RS13525;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_000423338.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 16680 17273 . + . ID=gene-C9E95_RS13530;Name=C9E95_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13530;old_locus_tag=C9E95_13870 NZ_PYJW01000127.1 Protein Homology CDS 16680 17273 . + 0 ID=cds-WP_001237180.1;Parent=gene-C9E95_RS13530;Dbxref=GenBank:WP_001237180.1;Name=WP_001237180.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461842.1;locus_tag=C9E95_RS13530;product=non-oxidative hydroxyarylic acid decarboxylases subunit B;protein_id=WP_001237180.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 17273 18700 . + . ID=gene-C9E95_RS13535;Name=C9E95_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13535;old_locus_tag=C9E95_13875 NZ_PYJW01000127.1 Protein Homology CDS 17273 18700 . + 0 ID=cds-WP_000863168.1;Parent=gene-C9E95_RS13535;Dbxref=GenBank:WP_000863168.1;Name=WP_000863168.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461843.1;locus_tag=C9E95_RS13535;product=non-oxidative hydroxyarylic acid decarboxylases subunit C;protein_id=WP_000863168.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 18711 18947 . + . ID=gene-C9E95_RS13540;Name=C9E95_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13540;old_locus_tag=C9E95_13880 NZ_PYJW01000127.1 Protein Homology CDS 18711 18947 . + 0 ID=cds-WP_000562964.1;Parent=gene-C9E95_RS13540;Dbxref=GenBank:WP_000562964.1;Name=WP_000562964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461844.1;locus_tag=C9E95_RS13540;product=non-oxidative hydroxyarylic acid decarboxylases subunit D;protein_id=WP_000562964.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 18992 19984 . - . ID=gene-C9E95_RS13545;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=C9E95_RS13545;old_locus_tag=C9E95_13885 NZ_PYJW01000127.1 Protein Homology CDS 18992 19984 . - 0 ID=cds-WP_000081498.1;Parent=gene-C9E95_RS13545;Dbxref=GenBank:WP_000081498.1;Name=WP_000081498.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=C9E95_RS13545;product=RNA polymerase sigma factor RpoS;protein_id=WP_000081498.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 20047 21117 . - . ID=gene-C9E95_RS13550;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=C9E95_RS13550;old_locus_tag=C9E95_13890 NZ_PYJW01000127.1 Protein Homology CDS 20047 21117 . - 0 ID=cds-WP_223151137.1;Parent=gene-C9E95_RS13550;Dbxref=GenBank:WP_223151137.1;Name=WP_223151137.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461846.1;locus_tag=C9E95_RS13550;product=murein hydrolase activator NlpD;protein_id=WP_223151137.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 21047 21205 . + . ID=gene-C9E95_RS23515;Name=C9E95_RS23515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23515 NZ_PYJW01000127.1 Protein Homology CDS 21047 21205 . + 0 ID=cds-WP_223148970.1;Parent=gene-C9E95_RS23515;Dbxref=GenBank:WP_223148970.1;Name=WP_223148970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541719.1;locus_tag=C9E95_RS23515;product=peptidase;protein_id=WP_223148970.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 21344 21970 . - . ID=gene-C9E95_RS13555;Name=C9E95_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13555;old_locus_tag=C9E95_13895 NZ_PYJW01000127.1 Protein Homology CDS 21344 21970 . - 0 ID=cds-WP_000253545.1;Parent=gene-C9E95_RS13555;Dbxref=GenBank:WP_000253545.1;Name=WP_000253545.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=C9E95_RS13555;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_000253545.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 21964 22725 . - . ID=gene-C9E95_RS13560;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=C9E95_RS13560;old_locus_tag=C9E95_13900 NZ_PYJW01000127.1 Protein Homology CDS 21964 22725 . - 0 ID=cds-WP_001221537.1;Parent=gene-C9E95_RS13560;Dbxref=GenBank:WP_001221537.1;Name=WP_001221537.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461848.1;locus_tag=C9E95_RS13560;product=5'/3'-nucleotidase SurE;protein_id=WP_001221537.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 22706 23755 . - . ID=gene-C9E95_RS13565;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=C9E95_RS13565;old_locus_tag=C9E95_13905 NZ_PYJW01000127.1 Protein Homology CDS 22706 23755 . - 0 ID=cds-WP_000134246.1;Parent=gene-C9E95_RS13565;Dbxref=GenBank:WP_000134246.1;Name=WP_000134246.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461849.1;locus_tag=C9E95_RS13565;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_000134246.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 23752 24231 . - . ID=gene-C9E95_RS13570;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=C9E95_RS13570;old_locus_tag=C9E95_13910 NZ_PYJW01000127.1 Protein Homology CDS 23752 24231 . - 0 ID=cds-WP_001219244.1;Parent=gene-C9E95_RS13570;Dbxref=GenBank:WP_001219244.1;Name=WP_001219244.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461850.1;locus_tag=C9E95_RS13570;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_001219244.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 24231 24941 . - . ID=gene-C9E95_RS13575;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=C9E95_RS13575;old_locus_tag=C9E95_13915 NZ_PYJW01000127.1 Protein Homology CDS 24231 24941 . - 0 ID=cds-WP_000741652.1;Parent=gene-C9E95_RS13575;Dbxref=GenBank:WP_000741652.1;Name=WP_000741652.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461851.1;locus_tag=C9E95_RS13575;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_000741652.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 24960 25271 . - . ID=gene-C9E95_RS13580;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=C9E95_RS13580;old_locus_tag=C9E95_13920 NZ_PYJW01000127.1 Protein Homology CDS 24960 25271 . - 0 ID=cds-WP_000517480.1;Parent=gene-C9E95_RS13580;Dbxref=GenBank:WP_000517480.1;Name=WP_000517480.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461852.1;locus_tag=C9E95_RS13580;product=cell division protein FtsB;protein_id=WP_000517480.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 25462 25785 . - . ID=gene-C9E95_RS13585;Name=C9E95_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13585;old_locus_tag=C9E95_13925 NZ_PYJW01000127.1 Protein Homology CDS 25462 25785 . - 0 ID=cds-WP_023993670.1;Parent=gene-C9E95_RS13585;Dbxref=GenBank:WP_023993670.1;Name=WP_023993670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233164.1;locus_tag=C9E95_RS13585;product=DUF3561 family protein;protein_id=WP_023993670.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 25836 26441 . - . ID=gene-C9E95_RS13590;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=C9E95_RS13590;old_locus_tag=C9E95_13930 NZ_PYJW01000127.1 Protein Homology CDS 25836 26441 . - 0 ID=cds-WP_001173659.1;Parent=gene-C9E95_RS13590;Dbxref=GenBank:WP_001173659.1;Name=WP_001173659.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461854.1;locus_tag=C9E95_RS13590;product=adenylyl-sulfate kinase;protein_id=WP_001173659.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 26428 27867 . - . ID=gene-C9E95_RS13595;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=C9E95_RS13595;old_locus_tag=C9E95_13935 NZ_PYJW01000127.1 Protein Homology CDS 26428 27867 . - 0 ID=cds-WP_023993669.1;Parent=gene-C9E95_RS13595;Dbxref=GenBank:WP_023993669.1;Name=WP_023993669.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461855.1;locus_tag=C9E95_RS13595;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_023993669.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 27877 28785 . - . ID=gene-C9E95_RS13600;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=C9E95_RS13600;old_locus_tag=C9E95_13940 NZ_PYJW01000127.1 Protein Homology CDS 27877 28785 . - 0 ID=cds-WP_000372384.1;Parent=gene-C9E95_RS13600;Dbxref=GenBank:WP_000372384.1;Name=WP_000372384.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=C9E95_RS13600;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_000372384.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 29036 30082 . + . ID=gene-C9E95_RS13605;Name=C9E95_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13605;old_locus_tag=C9E95_13945 NZ_PYJW01000127.1 Protein Homology CDS 29036 30082 . + 0 ID=cds-WP_000490481.1;Parent=gene-C9E95_RS13605;Dbxref=GenBank:WP_000490481.1;Name=WP_000490481.1;Ontology_term=GO:0008235;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461857.1;locus_tag=C9E95_RS13605;product=aminopeptidase;protein_id=WP_000490481.1;transl_table=11 NZ_PYJW01000127.1 RefSeq direct_repeat 30097 32179 . + . ID=id-NZ_PYJW01000127.1:30097..32179;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=30097..30125;rpt_unit_seq=cggtttatccccgctggcgcggggaacac NZ_PYJW01000127.1 RefSeq gene 32276 32569 . - . ID=gene-C9E95_RS13610;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=C9E95_RS13610;old_locus_tag=C9E95_13950 NZ_PYJW01000127.1 Protein Homology CDS 32276 32569 . - 0 ID=cds-WP_001518648.1;Parent=gene-C9E95_RS13610;Dbxref=GenBank:WP_001518648.1;Name=WP_001518648.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311635.1;locus_tag=C9E95_RS13610;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=WP_001518648.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 32569 33489 . - . ID=gene-C9E95_RS13615;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=C9E95_RS13615;old_locus_tag=C9E95_13955 NZ_PYJW01000127.1 Protein Homology CDS 32569 33489 . - 0 ID=cds-WP_000144837.1;Parent=gene-C9E95_RS13615;Dbxref=GenBank:WP_000144837.1;Name=WP_000144837.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461859.1;locus_tag=C9E95_RS13615;product=type I-E CRISPR-associated endonuclease Cas1e;protein_id=WP_000144837.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 33486 34136 . - . ID=gene-C9E95_RS13620;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=C9E95_RS13620;old_locus_tag=C9E95_13960 NZ_PYJW01000127.1 Protein Homology CDS 33486 34136 . - 0 ID=cds-WP_023993666.1;Parent=gene-C9E95_RS13620;Dbxref=GenBank:WP_023993666.1;Name=WP_023993666.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas6e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461860.1;locus_tag=C9E95_RS13620;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WP_023993666.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 34118 34864 . - . ID=gene-C9E95_RS13625;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=C9E95_RS13625;old_locus_tag=C9E95_13965 NZ_PYJW01000127.1 Protein Homology CDS 34118 34864 . - 0 ID=cds-WP_000085112.1;Parent=gene-C9E95_RS13625;Dbxref=GenBank:WP_000085112.1;Name=WP_000085112.1;Ontology_term=GO:0043571,GO:0051607,GO:0003723;gbkey=CDS;gene=cas5e;go_function=RNA binding|0003723||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461861.1;locus_tag=C9E95_RS13625;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=WP_000085112.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 34875 35933 . - . ID=gene-C9E95_RS13630;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=C9E95_RS13630;old_locus_tag=C9E95_13970 NZ_PYJW01000127.1 Protein Homology CDS 34875 35933 . - 0 ID=cds-WP_023993664.1;Parent=gene-C9E95_RS13630;Dbxref=GenBank:WP_023993664.1;Name=WP_023993664.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas7e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461862.1;locus_tag=C9E95_RS13630;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=WP_023993664.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 35947 36507 . - . ID=gene-C9E95_RS13635;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;gene_synonym=cse2;locus_tag=C9E95_RS13635;old_locus_tag=C9E95_13975 NZ_PYJW01000127.1 Protein Homology CDS 35947 36507 . - 0 ID=cds-WP_000117946.1;Parent=gene-C9E95_RS13635;Dbxref=GenBank:WP_000117946.1;Name=WP_000117946.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casB;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461863.1;locus_tag=C9E95_RS13635;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=WP_000117946.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 36504 38060 . - . ID=gene-C9E95_RS13640;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;gene_synonym=cse1;locus_tag=C9E95_RS13640;old_locus_tag=C9E95_13980 NZ_PYJW01000127.1 Protein Homology CDS 36504 38060 . - 0 ID=cds-WP_000368584.1;Parent=gene-C9E95_RS13640;Dbxref=GenBank:WP_000368584.1;Name=WP_000368584.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461864.1;locus_tag=C9E95_RS13640;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WP_000368584.1;transl_table=11 NZ_PYJW01000127.1 RefSeq gene 38072 40735 . - . ID=gene-C9E95_RS13645;Name=C9E95_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13645;old_locus_tag=C9E95_13985 NZ_PYJW01000127.1 Protein Homology CDS 38072 40735 . - 0 ID=cds-WP_023993663.1;Parent=gene-C9E95_RS13645;Dbxref=GenBank:WP_023993663.1;Name=WP_023993663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461865.1;locus_tag=C9E95_RS13645;product=CRISPR-associated helicase/endonuclease Cas3;protein_id=WP_023993663.1;transl_table=11 ##sequence-region NZ_PYJW01000059.1 1 39105 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000059.1 RefSeq region 1 39105 . + . ID=NZ_PYJW01000059.1:1..39105;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000059.1 RefSeq gene 93 440 . + . ID=gene-C9E95_RS05800;Name=C9E95_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05800;old_locus_tag=C9E95_05945 NZ_PYJW01000059.1 Protein Homology CDS 93 440 . + 0 ID=cds-WP_000615248.1;Parent=gene-C9E95_RS05800;Dbxref=GenBank:WP_000615248.1;Name=WP_000615248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615246.1;locus_tag=C9E95_RS05800;product=Mor transcription activator family protein;protein_id=WP_000615248.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 571 1920 . - . ID=gene-C9E95_RS05805;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=C9E95_RS05805;old_locus_tag=C9E95_05950 NZ_PYJW01000059.1 Protein Homology CDS 571 1920 . - 0 ID=cds-WP_000136394.1;Parent=gene-C9E95_RS05805;Dbxref=GenBank:WP_000136394.1;Name=WP_000136394.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463085.1;locus_tag=C9E95_RS05805;product=lysine-sensitive aspartokinase 3;protein_id=WP_000136394.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 2265 3914 . + . ID=gene-C9E95_RS05810;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=C9E95_RS05810;old_locus_tag=C9E95_05955 NZ_PYJW01000059.1 Protein Homology CDS 2265 3914 . + 0 ID=cds-WP_080203654.1;Parent=gene-C9E95_RS05810;Dbxref=GenBank:WP_080203654.1;Name=WP_080203654.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463086.1;locus_tag=C9E95_RS05810;product=glucose-6-phosphate isomerase;protein_id=WP_080203654.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 4358 4600 . + . ID=gene-C9E95_RS05815;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=C9E95_RS05815;old_locus_tag=C9E95_05960 NZ_PYJW01000059.1 Protein Homology CDS 4358 4600 . + 0 ID=cds-WP_001541297.1;Parent=gene-C9E95_RS05815;Dbxref=GenBank:WP_001541297.1;Name=WP_001541297.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=C9E95_RS05815;product=exopolysaccharide production protein YjbE;protein_id=WP_001541297.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 4664 5302 . + . ID=gene-C9E95_RS05820;Name=C9E95_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05820;old_locus_tag=C9E95_05965 NZ_PYJW01000059.1 Protein Homology CDS 4664 5302 . + 0 ID=cds-WP_000824800.1;Parent=gene-C9E95_RS05820;Dbxref=GenBank:WP_000824800.1;Name=WP_000824800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824802.1;locus_tag=C9E95_RS05820;product=YjbF family lipoprotein;protein_id=WP_000824800.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 5299 6033 . + . ID=gene-C9E95_RS05825;Name=C9E95_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05825;old_locus_tag=C9E95_05970 NZ_PYJW01000059.1 Protein Homology CDS 5299 6033 . + 0 ID=cds-WP_080203655.1;Parent=gene-C9E95_RS05825;Dbxref=GenBank:WP_080203655.1;Name=WP_080203655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463089.1;locus_tag=C9E95_RS05825;product=capsule biosynthesis GfcC family protein;protein_id=WP_080203655.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 6033 8129 . + . ID=gene-C9E95_RS05830;Name=C9E95_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05830;old_locus_tag=C9E95_05975 NZ_PYJW01000059.1 Protein Homology CDS 6033 8129 . + 0 ID=cds-WP_080203656.1;Parent=gene-C9E95_RS05830;Dbxref=GenBank:WP_080203656.1;Name=WP_080203656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463090.1;locus_tag=C9E95_RS05830;product=YjbH domain-containing protein;protein_id=WP_080203656.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 8272 8682 . + . ID=gene-C9E95_RS05835;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=C9E95_RS05835;old_locus_tag=C9E95_05980 NZ_PYJW01000059.1 Protein Homology CDS 8272 8682 . + 0 ID=cds-WP_000982749.1;Parent=gene-C9E95_RS05835;Dbxref=GenBank:WP_000982749.1;Name=WP_000982749.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463091.1;locus_tag=C9E95_RS05835;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000982749.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 8848 9738 . - . ID=gene-C9E95_RS05840;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=C9E95_RS05840;old_locus_tag=C9E95_05985 NZ_PYJW01000059.1 Protein Homology CDS 8848 9738 . - 0 ID=cds-WP_001252081.1;Parent=gene-C9E95_RS05840;Dbxref=GenBank:WP_001252081.1;Name=WP_001252081.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463092.1;locus_tag=C9E95_RS05840;product=maltose ABC transporter permease MalG;protein_id=WP_001252081.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 9753 11297 . - . ID=gene-C9E95_RS05845;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=C9E95_RS05845;old_locus_tag=C9E95_05990 NZ_PYJW01000059.1 Protein Homology CDS 9753 11297 . - 0 ID=cds-WP_000382570.1;Parent=gene-C9E95_RS05845;Dbxref=GenBank:WP_000382570.1;Name=WP_000382570.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463093.1;locus_tag=C9E95_RS05845;product=maltose ABC transporter permease MalF;protein_id=WP_000382570.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 11429 12619 . - . ID=gene-C9E95_RS05850;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=C9E95_RS05850;old_locus_tag=C9E95_05995 NZ_PYJW01000059.1 Protein Homology CDS 11429 12619 . - 0 ID=cds-WP_000695415.1;Parent=gene-C9E95_RS05850;Dbxref=GenBank:WP_000695415.1;Name=WP_000695415.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=C9E95_RS05850;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_000695415.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 12981 14090 . + . ID=gene-C9E95_RS05855;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=C9E95_RS05855;old_locus_tag=C9E95_06000 NZ_PYJW01000059.1 Protein Homology CDS 12981 14090 . + 0 ID=cds-WP_000179176.1;Parent=gene-C9E95_RS05855;Dbxref=GenBank:WP_000179176.1;Name=WP_000179176.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=C9E95_RS05855;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_000179176.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 14179 15537 . + . ID=gene-C9E95_RS05860;Name=C9E95_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05860;old_locus_tag=C9E95_06005 NZ_PYJW01000059.1 Protein Homology CDS 14179 15537 . + 0 ID=cds-WP_000973642.1;Parent=gene-C9E95_RS05860;Dbxref=GenBank:WP_000973642.1;Name=WP_000973642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463096.1;locus_tag=C9E95_RS05860;product=maltoporin;protein_id=WP_000973642.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 15701 16618 . + . ID=gene-C9E95_RS05865;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=C9E95_RS05865;old_locus_tag=C9E95_06010 NZ_PYJW01000059.1 Protein Homology CDS 15701 16618 . + 0 ID=cds-WP_000782497.1;Parent=gene-C9E95_RS05865;Dbxref=GenBank:WP_000782497.1;Name=WP_000782497.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463097.1;locus_tag=C9E95_RS05865;product=maltose operon protein MalM;protein_id=WP_000782497.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 16799 17296 . + . ID=gene-C9E95_RS05870;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=C9E95_RS05870;old_locus_tag=C9E95_06015 NZ_PYJW01000059.1 Protein Homology CDS 16799 17296 . + 0 ID=cds-WP_000019219.1;Parent=gene-C9E95_RS05870;Dbxref=GenBank:WP_000019219.1;Name=WP_000019219.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463098.1;locus_tag=C9E95_RS05870;product=chorismate lyase;protein_id=WP_000019219.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 17310 18182 . + . ID=gene-C9E95_RS05875;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=C9E95_RS05875;old_locus_tag=C9E95_06020 NZ_PYJW01000059.1 Protein Homology CDS 17310 18182 . + 0 ID=cds-WP_000455248.1;Parent=gene-C9E95_RS05875;Dbxref=GenBank:WP_000455248.1;Name=WP_000455248.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463099.1;locus_tag=C9E95_RS05875;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_000455248.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 18281 20701 . - . ID=gene-C9E95_RS05880;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=C9E95_RS05880;old_locus_tag=C9E95_06025 NZ_PYJW01000059.1 Protein Homology CDS 18281 20701 . - 0 ID=cds-WP_000017360.1;Parent=gene-C9E95_RS05880;Dbxref=GenBank:WP_000017360.1;Name=WP_000017360.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463100.1;locus_tag=C9E95_RS05880;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_000017360.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 20872 21240 . + . ID=gene-C9E95_RS05885;Name=C9E95_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05885;old_locus_tag=C9E95_06030 NZ_PYJW01000059.1 Protein Homology CDS 20872 21240 . + 0 ID=cds-WP_080219680.1;Parent=gene-C9E95_RS05885;Dbxref=GenBank:WP_080219680.1;Name=WP_080219680.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463101.1;locus_tag=C9E95_RS05885;product=diacylglycerol kinase;protein_id=WP_080219680.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 21349 21957 . + . ID=gene-C9E95_RS05890;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=C9E95_RS05890;old_locus_tag=C9E95_06035 NZ_PYJW01000059.1 Protein Homology CDS 21349 21957 . + 0 ID=cds-WP_000646079.1;Parent=gene-C9E95_RS05890;Dbxref=GenBank:WP_000646079.1;Name=WP_000646079.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=C9E95_RS05890;product=transcriptional repressor LexA;protein_id=WP_000646079.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 22136 23461 . + . ID=gene-C9E95_RS05895;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=C9E95_RS05895;old_locus_tag=C9E95_06040 NZ_PYJW01000059.1 Protein Homology CDS 22136 23461 . + 0 ID=cds-WP_001128112.1;Parent=gene-C9E95_RS05895;Dbxref=GenBank:WP_001128112.1;Name=WP_001128112.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463103.1;locus_tag=C9E95_RS05895;product=MATE family efflux transporter DinF;protein_id=WP_001128112.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 23458 23571 . + . ID=gene-C9E95_RS05900;Name=C9E95_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05900;old_locus_tag=C9E95_06045 NZ_PYJW01000059.1 Protein Homology CDS 23458 23571 . + 0 ID=cds-WP_001575282.1;Parent=gene-C9E95_RS05900;Dbxref=GenBank:WP_001575282.1;Name=WP_001575282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463104.1;locus_tag=C9E95_RS05900;product=hypothetical protein;protein_id=WP_001575282.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 23593 23802 . + . ID=gene-C9E95_RS05905;Name=C9E95_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05905;old_locus_tag=C9E95_06050 NZ_PYJW01000059.1 Protein Homology CDS 23593 23802 . + 0 ID=cds-WP_001030592.1;Parent=gene-C9E95_RS05905;Dbxref=GenBank:WP_001030592.1;Name=WP_001030592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=C9E95_RS05905;product=CsbD family protein;protein_id=WP_001030592.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 23901 24416 . - . ID=gene-C9E95_RS05910;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=C9E95_RS05910;old_locus_tag=C9E95_06055 NZ_PYJW01000059.1 Protein Homology CDS 23901 24416 . - 0 ID=cds-WP_000416271.1;Parent=gene-C9E95_RS05910;Dbxref=GenBank:WP_000416271.1;Name=WP_000416271.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463106.1;locus_tag=C9E95_RS05910;product=zinc uptake transcriptional repressor Zur;protein_id=WP_000416271.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 24663 25973 . + . ID=gene-C9E95_RS05915;Name=C9E95_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05915;old_locus_tag=C9E95_06060 NZ_PYJW01000059.1 Protein Homology CDS 24663 25973 . + 0 ID=cds-WP_001039342.1;Parent=gene-C9E95_RS05915;Dbxref=GenBank:WP_001039342.1;Name=WP_001039342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463107.1;locus_tag=C9E95_RS05915;product=conjugal transfer protein TraF;protein_id=WP_001039342.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 26061 27059 . + . ID=gene-C9E95_RS05920;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=C9E95_RS05920;old_locus_tag=C9E95_06065 NZ_PYJW01000059.1 Protein Homology CDS 26061 27059 . + 0 ID=cds-WP_135369826.1;Parent=gene-C9E95_RS05920;Dbxref=GenBank:WP_135369826.1;Name=WP_135369826.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463108.1;locus_tag=C9E95_RS05920;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_135369826.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 27227 27469 . + . ID=gene-C9E95_RS05925;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=C9E95_RS05925;old_locus_tag=C9E95_06070 NZ_PYJW01000059.1 Protein Homology CDS 27227 27469 . + 0 ID=cds-WP_000891414.1;Parent=gene-C9E95_RS05925;Dbxref=GenBank:WP_000891414.1;Name=WP_000891414.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463109.1;locus_tag=C9E95_RS05925;product=envelope stress response protein PspG;protein_id=WP_000891414.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 27644 28627 . - . ID=gene-C9E95_RS05930;Name=C9E95_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05930;old_locus_tag=C9E95_06075 NZ_PYJW01000059.1 Protein Homology CDS 27644 28627 . - 0 ID=cds-WP_000235550.1;Parent=gene-C9E95_RS05930;Dbxref=GenBank:WP_000235550.1;Name=WP_000235550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463110.1;locus_tag=C9E95_RS05930;product=quinone oxidoreductase;protein_id=WP_000235550.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 28692 30107 . + . ID=gene-C9E95_RS05935;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=C9E95_RS05935;old_locus_tag=C9E95_06080 NZ_PYJW01000059.1 Protein Homology CDS 28692 30107 . + 0 ID=cds-WP_000918353.1;Parent=gene-C9E95_RS05935;Dbxref=GenBank:WP_000918353.1;Name=WP_000918353.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463111.1;locus_tag=C9E95_RS05935;product=replicative DNA helicase;protein_id=WP_000918353.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 30139 31218 . + . ID=gene-C9E95_RS05940;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=C9E95_RS05940;old_locus_tag=C9E95_06085 NZ_PYJW01000059.1 Protein Homology CDS 30139 31218 . + 0 ID=cds-WP_001147297.1;Parent=gene-C9E95_RS05940;Dbxref=GenBank:WP_001147297.1;Name=WP_001147297.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463112.1;locus_tag=C9E95_RS05940;product=alanine racemase;protein_id=WP_001147297.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 31404 32597 . + . ID=gene-C9E95_RS05945;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=C9E95_RS05945;old_locus_tag=C9E95_06090 NZ_PYJW01000059.1 Protein Homology CDS 31404 32597 . + 0 ID=cds-WP_000486914.1;Parent=gene-C9E95_RS05945;Dbxref=GenBank:WP_000486914.1;Name=WP_000486914.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463113.1;locus_tag=C9E95_RS05945;product=aromatic amino acid transaminase;protein_id=WP_000486914.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 32784 33497 . + . ID=gene-C9E95_RS05950;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=C9E95_RS05950;old_locus_tag=C9E95_06100 NZ_PYJW01000059.1 Protein Homology CDS 32784 33497 . + 0 ID=cds-WP_000724431.1;Parent=gene-C9E95_RS05950;Dbxref=GenBank:WP_000724431.1;Name=WP_000724431.1;Ontology_term=GO:0003993,GO:0030288;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463114.1;locus_tag=C9E95_RS05950;product=acid phosphatase AphA;protein_id=WP_000724431.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 33626 34042 . + . ID=gene-C9E95_RS05955;Name=C9E95_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05955;old_locus_tag=C9E95_06105 NZ_PYJW01000059.1 Protein Homology CDS 33626 34042 . + 0 ID=cds-WP_000270392.1;Parent=gene-C9E95_RS05955;Dbxref=GenBank:WP_000270392.1;Name=WP_000270392.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463115.1;locus_tag=C9E95_RS05955;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_000270392.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 34045 34401 . + . ID=gene-C9E95_RS05960;Name=C9E95_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05960;old_locus_tag=C9E95_06110 NZ_PYJW01000059.1 Protein Homology CDS 34045 34401 . + 0 ID=cds-WP_000155663.1;Parent=gene-C9E95_RS05960;Dbxref=GenBank:WP_000155663.1;Name=WP_000155663.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463116.1;locus_tag=C9E95_RS05960;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000155663.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 34402 34740 . - . ID=gene-C9E95_RS05965;Name=C9E95_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05965;old_locus_tag=C9E95_06115 NZ_PYJW01000059.1 Protein Homology CDS 34402 34740 . - 0 ID=cds-WP_000146587.1;Parent=gene-C9E95_RS05965;Dbxref=GenBank:WP_000146587.1;Name=WP_000146587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463117.1;locus_tag=C9E95_RS05965;product=hypothetical protein;protein_id=WP_000146587.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 34727 35182 . - . ID=gene-C9E95_RS05970;Name=C9E95_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05970;old_locus_tag=C9E95_06120 NZ_PYJW01000059.1 Protein Homology CDS 34727 35182 . - 0 ID=cds-WP_000432197.1;Parent=gene-C9E95_RS05970;Dbxref=GenBank:WP_000432197.1;Name=WP_000432197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463118.1;locus_tag=C9E95_RS05970;product=hypothetical protein;protein_id=WP_000432197.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 35314 38139 . - . ID=gene-C9E95_RS05975;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=C9E95_RS05975;old_locus_tag=C9E95_06125 NZ_PYJW01000059.1 Protein Homology CDS 35314 38139 . - 0 ID=cds-WP_000357725.1;Parent=gene-C9E95_RS05975;Dbxref=GenBank:WP_000357725.1;Name=WP_000357725.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463119.1;locus_tag=C9E95_RS05975;product=excinuclease ABC subunit UvrA;protein_id=WP_000357725.1;transl_table=11 NZ_PYJW01000059.1 RefSeq gene 38387 38917 . + . ID=gene-C9E95_RS05985;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=C9E95_RS05985;old_locus_tag=C9E95_06135 NZ_PYJW01000059.1 Protein Homology CDS 38387 38917 . + 0 ID=cds-WP_000168322.1;Parent=gene-C9E95_RS05985;Dbxref=GenBank:WP_000168322.1;Name=WP_000168322.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463121.1;locus_tag=C9E95_RS05985;product=single-stranded DNA-binding protein SSB1;protein_id=WP_000168322.1;transl_table=11 ##sequence-region NZ_PYJW01000145.1 1 39101 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000145.1 RefSeq region 1 39101 . + . ID=NZ_PYJW01000145.1:1..39101;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000145.1 RefSeq gene 50 1228 . + . ID=gene-C9E95_RS17445;Name=ompS1;gbkey=Gene;gene=ompS1;gene_biotype=protein_coding;locus_tag=C9E95_RS17445;old_locus_tag=C9E95_17875 NZ_PYJW01000145.1 Protein Homology CDS 50 1228 . + 0 ID=cds-WP_001080668.1;Parent=gene-C9E95_RS17445;Dbxref=GenBank:WP_001080668.1;Name=WP_001080668.1;gbkey=CDS;gene=ompS1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460946.1;locus_tag=C9E95_RS17445;product=porin OmpS1;protein_id=WP_001080668.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 1489 1677 . - . ID=gene-C9E95_RS17450;Name=C9E95_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17450;old_locus_tag=C9E95_17880 NZ_PYJW01000145.1 Protein Homology CDS 1489 1677 . - 0 ID=cds-WP_024131109.1;Parent=gene-C9E95_RS17450;Dbxref=GenBank:WP_024131109.1;Name=WP_024131109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=C9E95_RS17450;product=hypothetical protein;protein_id=WP_024131109.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 1688 1900 . - . ID=gene-C9E95_RS17455;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=C9E95_RS17455;old_locus_tag=C9E95_17885 NZ_PYJW01000145.1 Protein Homology CDS 1688 1900 . - 0 ID=cds-WP_000208509.1;Parent=gene-C9E95_RS17455;Dbxref=GenBank:WP_000208509.1;Name=WP_000208509.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460947.1;locus_tag=C9E95_RS17455;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000208509.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 2355 3623 . - . ID=gene-C9E95_RS17460;Name=C9E95_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17460;old_locus_tag=C9E95_17890 NZ_PYJW01000145.1 Protein Homology CDS 2355 3623 . - 0 ID=cds-WP_000457663.1;Parent=gene-C9E95_RS17460;Dbxref=GenBank:WP_000457663.1;Name=WP_000457663.1;Ontology_term=GO:0006974,GO:0009432,GO:0019985,GO:0042276,GO:0003684,GO:0003887;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA damage response|0006974||IEA,SOS response|0009432||IEA,translesion synthesis|0019985||IEA,error-prone translesion synthesis|0042276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=C9E95_RS17460;product=Y-family DNA polymerase;protein_id=WP_000457663.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 3626 4045 . - . ID=gene-C9E95_RS17465;Name=C9E95_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17465;old_locus_tag=C9E95_17895 NZ_PYJW01000145.1 Protein Homology CDS 3626 4045 . - 0 ID=cds-WP_080204101.1;Parent=gene-C9E95_RS17465;Dbxref=GenBank:WP_080204101.1;Name=WP_080204101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460949.1;locus_tag=C9E95_RS17465;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_080204101.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 4636 4725 . - . ID=gene-C9E95_RS17480;Name=C9E95_RS17480;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS17480;old_locus_tag=C9E95_17910 NZ_PYJW01000145.1 tRNAscan-SE tRNA 4636 4725 . - . ID=rna-C9E95_RS17480;Parent=gene-C9E95_RS17480;anticodon=(pos:complement(4689..4691));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS17480;product=tRNA-Ser NZ_PYJW01000145.1 tRNAscan-SE exon 4636 4725 . - . ID=exon-C9E95_RS17480-1;Parent=rna-C9E95_RS17480;anticodon=(pos:complement(4689..4691));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS17480;product=tRNA-Ser NZ_PYJW01000145.1 RefSeq gene 4814 5611 . + . ID=gene-C9E95_RS17485;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=C9E95_RS17485;old_locus_tag=C9E95_17915 NZ_PYJW01000145.1 Protein Homology CDS 4814 5611 . + 0 ID=cds-WP_000598921.1;Parent=gene-C9E95_RS17485;Dbxref=GenBank:WP_000598921.1;Name=WP_000598921.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460951.1;locus_tag=C9E95_RS17485;product=DgsA anti-repressor MtfA;protein_id=WP_000598921.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 5712 5787 . + . ID=gene-C9E95_RS17490;Name=C9E95_RS17490;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS17490;old_locus_tag=C9E95_17920 NZ_PYJW01000145.1 tRNAscan-SE tRNA 5712 5787 . + . ID=rna-C9E95_RS17490;Parent=gene-C9E95_RS17490;anticodon=(pos:5745..5747);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS17490;product=tRNA-Asn NZ_PYJW01000145.1 tRNAscan-SE exon 5712 5787 . + . ID=exon-C9E95_RS17490-1;Parent=rna-C9E95_RS17490;anticodon=(pos:5745..5747);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS17490;product=tRNA-Asn NZ_PYJW01000145.1 RefSeq pseudogene 5955 6260 . + . ID=gene-C9E95_RS17495;Name=C9E95_RS17495;end_range=6260,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS17495;old_locus_tag=C9E95_17925;partial=true;pseudo=true NZ_PYJW01000145.1 Protein Homology CDS 5955 6260 . + 0 ID=cds-C9E95_RS17495;Parent=gene-C9E95_RS17495;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;end_range=6260,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=C9E95_RS17495;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 6682 6757 . + . ID=gene-C9E95_RS17500;Name=C9E95_RS17500;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS17500;old_locus_tag=C9E95_17930 NZ_PYJW01000145.1 tRNAscan-SE tRNA 6682 6757 . + . ID=rna-C9E95_RS17500;Parent=gene-C9E95_RS17500;anticodon=(pos:6715..6717);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS17500;product=tRNA-Asn NZ_PYJW01000145.1 tRNAscan-SE exon 6682 6757 . + . ID=exon-C9E95_RS17500-1;Parent=rna-C9E95_RS17500;anticodon=(pos:6715..6717);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS17500;product=tRNA-Asn NZ_PYJW01000145.1 RefSeq gene 6921 7394 . + . ID=gene-C9E95_RS17505;Name=C9E95_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17505;old_locus_tag=C9E95_17935 NZ_PYJW01000145.1 Protein Homology CDS 6921 7394 . + 0 ID=cds-WP_001219016.1;Parent=gene-C9E95_RS17505;Dbxref=GenBank:WP_001219016.1;Name=WP_001219016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460952.1;locus_tag=C9E95_RS17505;product=peptidase;protein_id=WP_001219016.1;transl_table=11 NZ_PYJW01000145.1 RefSeq pseudogene 7869 8336 . + . ID=gene-C9E95_RS17515;Name=C9E95_RS17515;end_range=8336,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS17515;old_locus_tag=C9E95_17945;partial=true;pseudo=true NZ_PYJW01000145.1 Protein Homology CDS 7869 8336 . + 0 ID=cds-C9E95_RS17515;Parent=gene-C9E95_RS17515;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=8336,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517119.1;locus_tag=C9E95_RS17515;partial=true;product=phage integrase N-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_PYJW01000145.1 RefSeq pseudogene 8422 8700 . + . ID=gene-C9E95_RS17520;Name=C9E95_RS17520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS17520;old_locus_tag=C9E95_17950;partial=true;pseudo=true;start_range=.,8422 NZ_PYJW01000145.1 Protein Homology CDS 8422 8700 . + 0 ID=cds-C9E95_RS17520;Parent=gene-C9E95_RS17520;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950586.1;locus_tag=C9E95_RS17520;partial=true;product=transposase;pseudo=true;start_range=.,8422;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 9384 11078 . + . ID=gene-C9E95_RS17525;Name=C9E95_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17525;old_locus_tag=C9E95_17955 NZ_PYJW01000145.1 Protein Homology CDS 9384 11078 . + 0 ID=cds-WP_077906259.1;Parent=gene-C9E95_RS17525;Dbxref=GenBank:WP_077906259.1;Name=WP_077906259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460954.1;locus_tag=C9E95_RS17525;product=SEL1-like repeat protein;protein_id=WP_077906259.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 11135 12865 . + . ID=gene-C9E95_RS17530;Name=C9E95_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17530;old_locus_tag=C9E95_17960 NZ_PYJW01000145.1 Protein Homology CDS 11135 12865 . + 0 ID=cds-WP_000669124.1;Parent=gene-C9E95_RS17530;Dbxref=GenBank:WP_000669124.1;Name=WP_000669124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460955.1;locus_tag=C9E95_RS17530;product=hypothetical protein;protein_id=WP_000669124.1;transl_table=11 NZ_PYJW01000145.1 RefSeq pseudogene 12923 13027 . - . ID=gene-C9E95_RS17535;Name=C9E95_RS17535;end_range=13027,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS17535;old_locus_tag=C9E95_17965;partial=true;pseudo=true NZ_PYJW01000145.1 Protein Homology CDS 12923 13027 . - 0 ID=cds-C9E95_RS17535;Parent=gene-C9E95_RS17535;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=13027,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=C9E95_RS17535;partial=true;product=DUF520 family protein;pseudo=true;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 13075 13248 . + . ID=gene-C9E95_RS23210;Name=C9E95_RS23210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23210 NZ_PYJW01000145.1 Protein Homology CDS 13075 13248 . + 0 ID=cds-WP_000957535.1;Parent=gene-C9E95_RS23210;Dbxref=GenBank:WP_000957535.1;Name=WP_000957535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000957538.1;locus_tag=C9E95_RS23210;product=hypothetical protein;protein_id=WP_000957535.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 13769 15223 . - . ID=gene-C9E95_RS17545;Name=C9E95_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17545;old_locus_tag=C9E95_17975 NZ_PYJW01000145.1 Protein Homology CDS 13769 15223 . - 0 ID=cds-WP_000428191.1;Parent=gene-C9E95_RS17545;Dbxref=GenBank:WP_000428191.1;Name=WP_000428191.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460956.1;locus_tag=C9E95_RS17545;product=AMP nucleosidase;protein_id=WP_000428191.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 15269 15430 . + . ID=gene-C9E95_RS17550;Name=C9E95_RS17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17550;old_locus_tag=C9E95_17980 NZ_PYJW01000145.1 Protein Homology CDS 15269 15430 . + 0 ID=cds-WP_023888257.1;Parent=gene-C9E95_RS17550;Dbxref=GenBank:WP_023888257.1;Name=WP_023888257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448416.1;locus_tag=C9E95_RS17550;product=hypothetical protein;protein_id=WP_023888257.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 15419 15745 . - . ID=gene-C9E95_RS17555;Name=C9E95_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17555;old_locus_tag=C9E95_17985 NZ_PYJW01000145.1 Protein Homology CDS 15419 15745 . - 0 ID=cds-WP_000228159.1;Parent=gene-C9E95_RS17555;Dbxref=GenBank:WP_000228159.1;Name=WP_000228159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460958.1;locus_tag=C9E95_RS17555;product=DUF1493 family protein;protein_id=WP_000228159.1;transl_table=11 NZ_PYJW01000145.1 RefSeq pseudogene 15739 16202 . - . ID=gene-C9E95_RS17560;Name=C9E95_RS17560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS17560;old_locus_tag=C9E95_17990;pseudo=true NZ_PYJW01000145.1 Protein Homology CDS 15739 16202 . - 0 ID=cds-C9E95_RS17560;Parent=gene-C9E95_RS17560;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211098.1;locus_tag=C9E95_RS17560;product=STM2901 family protein;pseudo=true;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 16622 16697 . - . ID=gene-C9E95_RS17570;Name=C9E95_RS17570;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS17570;old_locus_tag=C9E95_18000 NZ_PYJW01000145.1 tRNAscan-SE tRNA 16622 16697 . - . ID=rna-C9E95_RS17570;Parent=gene-C9E95_RS17570;anticodon=(pos:complement(16662..16664));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS17570;product=tRNA-Asn NZ_PYJW01000145.1 tRNAscan-SE exon 16622 16697 . - . ID=exon-C9E95_RS17570-1;Parent=rna-C9E95_RS17570;anticodon=(pos:complement(16662..16664));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS17570;product=tRNA-Asn NZ_PYJW01000145.1 RefSeq gene 16838 18295 . - . ID=gene-C9E95_RS17575;Name=C9E95_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17575;old_locus_tag=C9E95_18005 NZ_PYJW01000145.1 Protein Homology CDS 16838 18295 . - 0 ID=cds-WP_080204135.1;Parent=gene-C9E95_RS17575;Dbxref=GenBank:WP_080204135.1;Name=WP_080204135.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460959.1;locus_tag=C9E95_RS17575;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=WP_080204135.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 18455 18530 . + . ID=gene-C9E95_RS17580;Name=C9E95_RS17580;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS17580;old_locus_tag=C9E95_18010 NZ_PYJW01000145.1 tRNAscan-SE tRNA 18455 18530 . + . ID=rna-C9E95_RS17580;Parent=gene-C9E95_RS17580;anticodon=(pos:18488..18490);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS17580;product=tRNA-Asn NZ_PYJW01000145.1 tRNAscan-SE exon 18455 18530 . + . ID=exon-C9E95_RS17580-1;Parent=rna-C9E95_RS17580;anticodon=(pos:18488..18490);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS17580;product=tRNA-Asn NZ_PYJW01000145.1 RefSeq gene 18756 19685 . - . ID=gene-C9E95_RS17585;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=C9E95_RS17585;old_locus_tag=C9E95_18015 NZ_PYJW01000145.1 Protein Homology CDS 18756 19685 . - 0 ID=cds-WP_001252828.1;Parent=gene-C9E95_RS17585;Dbxref=GenBank:WP_001252828.1;Name=WP_001252828.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460960.1;locus_tag=C9E95_RS17585;product=L%2CD-transpeptidase;protein_id=WP_001252828.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 19763 20833 . - . ID=gene-C9E95_RS17590;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=C9E95_RS17590;old_locus_tag=C9E95_18020 NZ_PYJW01000145.1 Protein Homology CDS 19763 20833 . - 0 ID=cds-WP_001193976.1;Parent=gene-C9E95_RS17590;Dbxref=GenBank:WP_001193976.1;Name=WP_001193976.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460961.1;locus_tag=C9E95_RS17590;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_001193976.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 20860 21603 . - . ID=gene-C9E95_RS17595;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=C9E95_RS17595;old_locus_tag=C9E95_18025 NZ_PYJW01000145.1 Protein Homology CDS 20860 21603 . - 0 ID=cds-WP_000039997.1;Parent=gene-C9E95_RS17595;Dbxref=GenBank:WP_000039997.1;Name=WP_000039997.1;Ontology_term=GO:0009236,GO:0008818,GO:0051073;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA,adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460962.1;locus_tag=C9E95_RS17595;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_000039997.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 21600 22145 . - . ID=gene-C9E95_RS17600;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=C9E95_RS17600;old_locus_tag=C9E95_18030 NZ_PYJW01000145.1 Protein Homology CDS 21600 22145 . - 0 ID=cds-WP_000973146.1;Parent=gene-C9E95_RS17600;Dbxref=GenBank:WP_000973146.1;Name=WP_000973146.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460963.1;locus_tag=C9E95_RS17600;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_000973146.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 22142 23662 . - . ID=gene-C9E95_RS17605;Name=C9E95_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17605;old_locus_tag=C9E95_18035 NZ_PYJW01000145.1 Protein Homology CDS 22142 23662 . - 0 ID=cds-WP_023993356.1;Parent=gene-C9E95_RS17605;Dbxref=GenBank:WP_023993356.1;Name=WP_023993356.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460964.1;locus_tag=C9E95_RS17605;product=cobyric acid synthase;protein_id=WP_023993356.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 23659 24474 . - . ID=gene-C9E95_RS17610;Name=C9E95_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17610;old_locus_tag=C9E95_18040 NZ_PYJW01000145.1 Protein Homology CDS 23659 24474 . - 0 ID=cds-WP_023993357.1;Parent=gene-C9E95_RS17610;Dbxref=GenBank:WP_023993357.1;Name=WP_023993357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460965.1;locus_tag=C9E95_RS17610;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_023993357.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 24483 25160 . - . ID=gene-C9E95_RS17615;Name=C9E95_RS17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17615;old_locus_tag=C9E95_18045 NZ_PYJW01000145.1 Protein Homology CDS 24483 25160 . - 0 ID=cds-WP_023241076.1;Parent=gene-C9E95_RS17615;Dbxref=GenBank:WP_023241076.1;Name=WP_023241076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460966.1;locus_tag=C9E95_RS17615;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=WP_023241076.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 25147 25428 . - . ID=gene-C9E95_RS17620;Name=C9E95_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17620;old_locus_tag=C9E95_18050 NZ_PYJW01000145.1 Protein Homology CDS 25147 25428 . - 0 ID=cds-WP_000753212.1;Parent=gene-C9E95_RS17620;Dbxref=GenBank:WP_000753212.1;Name=WP_000753212.1;Ontology_term=GO:0006824,GO:0009236,GO:0015087,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460967.1;locus_tag=C9E95_RS17620;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=WP_000753212.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 25430 26167 . - . ID=gene-C9E95_RS17625;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=C9E95_RS17625;old_locus_tag=C9E95_18055 NZ_PYJW01000145.1 Protein Homology CDS 25430 26167 . - 0 ID=cds-WP_000764336.1;Parent=gene-C9E95_RS17625;Dbxref=GenBank:WP_000764336.1;Name=WP_000764336.1;Ontology_term=GO:0006824,GO:0009236,GO:0016020,GO:0043190;gbkey=CDS;gene=cbiM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=C9E95_RS17625;product=cobalt ECF transporter S component CbiM;protein_id=WP_000764336.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 26164 26877 . - . ID=gene-C9E95_RS17630;Name=C9E95_RS17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17630;old_locus_tag=C9E95_18060 NZ_PYJW01000145.1 Protein Homology CDS 26164 26877 . - 0 ID=cds-WP_080203687.1;Parent=gene-C9E95_RS17630;Dbxref=GenBank:WP_080203687.1;Name=WP_080203687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460969.1;locus_tag=C9E95_RS17630;product=cobalt-factor II C(20)-methyltransferase;protein_id=WP_080203687.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 26874 27668 . - . ID=gene-C9E95_RS17635;Name=cbiK;gbkey=Gene;gene=cbiK;gene_biotype=protein_coding;locus_tag=C9E95_RS17635;old_locus_tag=C9E95_18065 NZ_PYJW01000145.1 Protein Homology CDS 26874 27668 . - 0 ID=cds-WP_000709784.1;Parent=gene-C9E95_RS17635;Dbxref=GenBank:WP_000709784.1;Name=WP_000709784.1;Ontology_term=GO:0006779,GO:0016852,GO:0046906;gbkey=CDS;gene=cbiK;go_function=sirohydrochlorin cobaltochelatase activity|0016852||IEA,tetrapyrrole binding|0046906||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460970.1;locus_tag=C9E95_RS17635;product=sirohydrochlorin cobaltochelatase;protein_id=WP_000709784.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 27671 28462 . - . ID=gene-C9E95_RS17640;Name=C9E95_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17640;old_locus_tag=C9E95_18070 NZ_PYJW01000145.1 Protein Homology CDS 27671 28462 . - 0 ID=cds-WP_020437396.1;Parent=gene-C9E95_RS17640;Dbxref=GenBank:WP_020437396.1;Name=WP_020437396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460971.1;locus_tag=C9E95_RS17640;product=cobalt-precorrin-6A reductase;protein_id=WP_020437396.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 28459 29184 . - . ID=gene-C9E95_RS17645;Name=C9E95_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17645;old_locus_tag=C9E95_18075 NZ_PYJW01000145.1 Protein Homology CDS 28459 29184 . - 0 ID=cds-WP_017441819.1;Parent=gene-C9E95_RS17645;Dbxref=GenBank:WP_017441819.1;Name=WP_017441819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460972.1;locus_tag=C9E95_RS17645;product=precorrin-3B C(17)-methyltransferase;protein_id=WP_017441819.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 29184 30239 . - . ID=gene-C9E95_RS17650;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=protein_coding;locus_tag=C9E95_RS17650;old_locus_tag=C9E95_18080 NZ_PYJW01000145.1 Protein Homology CDS 29184 30239 . - 0 ID=cds-WP_023993360.1;Parent=gene-C9E95_RS17650;Dbxref=GenBank:WP_023993360.1;Name=WP_023993360.1;gbkey=CDS;gene=cbiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460973.1;locus_tag=C9E95_RS17650;product=cobalt-precorrin 5A hydrolase;protein_id=WP_023993360.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 30220 30993 . - . ID=gene-C9E95_RS17655;Name=C9E95_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17655;old_locus_tag=C9E95_18085 NZ_PYJW01000145.1 Protein Homology CDS 30220 30993 . - 0 ID=cds-WP_017465525.1;Parent=gene-C9E95_RS17655;Dbxref=GenBank:WP_017465525.1;Name=WP_017465525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460974.1;locus_tag=C9E95_RS17655;product=cobalt-precorrin-4 methyltransferase;protein_id=WP_017465525.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 30977 31555 . - . ID=gene-C9E95_RS17660;Name=C9E95_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17660;old_locus_tag=C9E95_18090 NZ_PYJW01000145.1 Protein Homology CDS 30977 31555 . - 0 ID=cds-WP_000650985.1;Parent=gene-C9E95_RS17660;Dbxref=GenBank:WP_000650985.1;Name=WP_000650985.1;Ontology_term=GO:0009236,GO:0008276;gbkey=CDS;go_function=protein methyltransferase activity|0008276||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460975.1;locus_tag=C9E95_RS17660;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=WP_000650985.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 31545 32150 . - . ID=gene-C9E95_RS17665;Name=C9E95_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17665;old_locus_tag=C9E95_18095 NZ_PYJW01000145.1 Protein Homology CDS 31545 32150 . - 0 ID=cds-WP_000958841.1;Parent=gene-C9E95_RS17665;Dbxref=GenBank:WP_000958841.1;Name=WP_000958841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460976.1;locus_tag=C9E95_RS17665;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=WP_000958841.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 32144 33283 . - . ID=gene-C9E95_RS17670;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=C9E95_RS17670;old_locus_tag=C9E95_18100 NZ_PYJW01000145.1 Protein Homology CDS 32144 33283 . - 0 ID=cds-WP_001292914.1;Parent=gene-C9E95_RS17670;Dbxref=GenBank:WP_001292914.1;Name=WP_001292914.1;Ontology_term=GO:0009236,GO:0005737;gbkey=CDS;gene=cbiD;go_component=cytoplasm|0005737||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460977.1;locus_tag=C9E95_RS17670;product=cobalt-precorrin-5B (C(1))-methyltransferase CbiD;protein_id=WP_001292914.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 33283 33915 . - . ID=gene-C9E95_RS17675;Name=C9E95_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17675;old_locus_tag=C9E95_18105 NZ_PYJW01000145.1 Protein Homology CDS 33283 33915 . - 0 ID=cds-WP_000558995.1;Parent=gene-C9E95_RS17675;Dbxref=GenBank:WP_000558995.1;Name=WP_000558995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460978.1;locus_tag=C9E95_RS17675;product=cobalt-precorrin-8 methylmutase;protein_id=WP_000558995.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 33926 34885 . - . ID=gene-C9E95_RS17680;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=C9E95_RS17680;old_locus_tag=C9E95_18110 NZ_PYJW01000145.1 Protein Homology CDS 33926 34885 . - 0 ID=cds-WP_023241078.1;Parent=gene-C9E95_RS17680;Dbxref=GenBank:WP_023241078.1;Name=WP_023241078.1;Ontology_term=GO:0009236,GO:0048472,GO:0016020;gbkey=CDS;gene=cbiB;go_component=membrane|0016020||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460979.1;locus_tag=C9E95_RS17680;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WP_023241078.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 34882 36261 . - . ID=gene-C9E95_RS17685;Name=C9E95_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17685;old_locus_tag=C9E95_18115 NZ_PYJW01000145.1 Protein Homology CDS 34882 36261 . - 0 ID=cds-WP_080203688.1;Parent=gene-C9E95_RS17685;Dbxref=GenBank:WP_080203688.1;Name=WP_080203688.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460980.1;locus_tag=C9E95_RS17685;product=cobyrinate a%2Cc-diamide synthase;protein_id=WP_080203688.1;transl_table=11 NZ_PYJW01000145.1 cmsearch riboswitch 36359 36533 . - . ID=id-NZ_PYJW01000145.1:36359..36533;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PYJW01000145.1 RefSeq gene 36859 37770 . - . ID=gene-C9E95_RS17690;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=protein_coding;locus_tag=C9E95_RS17690;old_locus_tag=C9E95_18120 NZ_PYJW01000145.1 Protein Homology CDS 36859 37770 . - 0 ID=cds-WP_000622326.1;Parent=gene-C9E95_RS17690;Dbxref=GenBank:WP_000622326.1;Name=WP_000622326.1;Ontology_term=GO:0009236,GO:0051144,GO:0003700,GO:0043565;gbkey=CDS;gene=pocR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,propanediol catabolic process|0051144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460981.1;locus_tag=C9E95_RS17690;product=transcriptional regulator PocR;protein_id=WP_000622326.1;transl_table=11 NZ_PYJW01000145.1 RefSeq gene 37987 38781 . - . ID=gene-C9E95_RS17695;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=C9E95_RS17695;old_locus_tag=C9E95_18125 NZ_PYJW01000145.1 Protein Homology CDS 37987 38781 . - 0 ID=cds-WP_001000023.1;Parent=gene-C9E95_RS17695;Dbxref=GenBank:WP_001000023.1;Name=WP_001000023.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460982.1;locus_tag=C9E95_RS17695;product=propanediol diffusion facilitator PduF;protein_id=WP_001000023.1;transl_table=11 ##sequence-region NZ_PYJW01000037.1 1 621 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000037.1 RefSeq region 1 621 . + . ID=NZ_PYJW01000037.1:1..621;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000037.1 RefSeq pseudogene 507 621 . + . ID=gene-C9E95_RS23390;Name=C9E95_RS23390;end_range=621,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23390;partial=true;pseudo=true NZ_PYJW01000037.1 Protein Homology CDS 507 621 . + 0 ID=cds-C9E95_RS23390;Parent=gene-C9E95_RS23390;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=621,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463122.1;locus_tag=C9E95_RS23390;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_PYJW01000007.1 1 37954 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000007.1 RefSeq region 1 37954 . + . ID=NZ_PYJW01000007.1:1..37954;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000007.1 RefSeq gene 131 295 . + . ID=gene-C9E95_RS00510;Name=C9E95_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00510;old_locus_tag=C9E95_00505 NZ_PYJW01000007.1 Protein Homology CDS 131 295 . + 0 ID=cds-WP_001134856.1;Parent=gene-C9E95_RS00510;Dbxref=GenBank:WP_001134856.1;Name=WP_001134856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460810.1;locus_tag=C9E95_RS00510;product=membrane protein;protein_id=WP_001134856.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 286 501 . + . ID=gene-C9E95_RS23635;Name=C9E95_RS23635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23635 NZ_PYJW01000007.1 Protein Homology CDS 286 501 . + 0 ID=cds-WP_001574231.1;Parent=gene-C9E95_RS23635;Dbxref=GenBank:WP_001574231.1;Name=WP_001574231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001529227.1;locus_tag=C9E95_RS23635;product=hypothetical protein;protein_id=WP_001574231.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 519 1169 . + . ID=gene-C9E95_RS00515;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=C9E95_RS00515;old_locus_tag=C9E95_00510 NZ_PYJW01000007.1 Protein Homology CDS 519 1169 . + 0 ID=cds-WP_000986176.1;Parent=gene-C9E95_RS00515;Dbxref=GenBank:WP_000986176.1;Name=WP_000986176.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460809.1;locus_tag=C9E95_RS00515;product=protein-serine/threonine phosphatase;protein_id=WP_000986176.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 1188 1379 . - . ID=gene-C9E95_RS00520;Name=C9E95_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00520;old_locus_tag=C9E95_00515 NZ_PYJW01000007.1 Protein Homology CDS 1188 1379 . - 0 ID=cds-WP_000457838.1;Parent=gene-C9E95_RS00520;Dbxref=GenBank:WP_000457838.1;Name=WP_000457838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460808.1;locus_tag=C9E95_RS00520;product=YebW family protein;protein_id=WP_000457838.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 1490 1726 . - . ID=gene-C9E95_RS00525;Name=C9E95_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00525;old_locus_tag=C9E95_00520 NZ_PYJW01000007.1 Protein Homology CDS 1490 1726 . - 0 ID=cds-WP_024131167.1;Parent=gene-C9E95_RS00525;Dbxref=GenBank:WP_024131167.1;Name=WP_024131167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=C9E95_RS00525;product=YebV family protein;protein_id=WP_024131167.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 1844 3283 . - . ID=gene-C9E95_RS00530;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=C9E95_RS00530;old_locus_tag=C9E95_00525 NZ_PYJW01000007.1 Protein Homology CDS 1844 3283 . - 0 ID=cds-WP_001604881.1;Parent=gene-C9E95_RS00530;Dbxref=GenBank:WP_001604881.1;Name=WP_001604881.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460806.1;locus_tag=C9E95_RS00530;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_001604881.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 3361 5994 . - . ID=gene-C9E95_RS00535;Name=C9E95_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00535;old_locus_tag=C9E95_00530 NZ_PYJW01000007.1 Protein Homology CDS 3361 5994 . - 0 ID=cds-WP_001521100.1;Parent=gene-C9E95_RS00535;Dbxref=GenBank:WP_001521100.1;Name=WP_001521100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=C9E95_RS00535;product=PqiB family protein;protein_id=WP_001521100.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 5963 7246 . - . ID=gene-C9E95_RS00540;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=C9E95_RS00540;old_locus_tag=C9E95_00535 NZ_PYJW01000007.1 Protein Homology CDS 5963 7246 . - 0 ID=cds-WP_001207293.1;Parent=gene-C9E95_RS00540;Dbxref=GenBank:WP_001207293.1;Name=WP_001207293.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460804.1;locus_tag=C9E95_RS00540;product=membrane integrity lipid transport subunit YebS;protein_id=WP_001207293.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 7375 7872 . + . ID=gene-C9E95_RS00545;Name=C9E95_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00545;old_locus_tag=C9E95_00540 NZ_PYJW01000007.1 Protein Homology CDS 7375 7872 . + 0 ID=cds-WP_001518229.1;Parent=gene-C9E95_RS00545;Dbxref=GenBank:WP_001518229.1;Name=WP_001518229.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=C9E95_RS00545;product=GAF domain-containing protein;protein_id=WP_001518229.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 7970 8656 . + . ID=gene-C9E95_RS00550;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=C9E95_RS00550;old_locus_tag=C9E95_00545 NZ_PYJW01000007.1 Protein Homology CDS 7970 8656 . + 0 ID=cds-WP_000431401.1;Parent=gene-C9E95_RS00550;Dbxref=GenBank:WP_000431401.1;Name=WP_000431401.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460802.1;locus_tag=C9E95_RS00550;product=RNA chaperone ProQ;protein_id=WP_000431401.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 8676 10724 . + . ID=gene-C9E95_RS00555;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=C9E95_RS00555;old_locus_tag=C9E95_00550 NZ_PYJW01000007.1 Protein Homology CDS 8676 10724 . + 0 ID=cds-WP_001091237.1;Parent=gene-C9E95_RS00555;Dbxref=GenBank:WP_001091237.1;Name=WP_001091237.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460801.1;locus_tag=C9E95_RS00555;product=carboxy terminal-processing peptidase;protein_id=WP_001091237.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 10918 11799 . + . ID=gene-C9E95_RS00560;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=C9E95_RS00560;old_locus_tag=C9E95_00555 NZ_PYJW01000007.1 Protein Homology CDS 10918 11799 . + 0 ID=cds-WP_000984498.1;Parent=gene-C9E95_RS00560;Dbxref=GenBank:WP_000984498.1;Name=WP_000984498.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=C9E95_RS00560;product=protease HtpX;protein_id=WP_000984498.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 11847 13220 . - . ID=gene-C9E95_RS00565;Name=C9E95_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00565;old_locus_tag=C9E95_00560 NZ_PYJW01000007.1 Protein Homology CDS 11847 13220 . - 0 ID=cds-WP_080204070.1;Parent=gene-C9E95_RS00565;Dbxref=GenBank:WP_080204070.1;Name=WP_080204070.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460799.1;locus_tag=C9E95_RS00565;product=MFS transporter;protein_id=WP_080204070.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 13396 14187 . + . ID=gene-C9E95_RS00570;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=C9E95_RS00570;old_locus_tag=C9E95_00565 NZ_PYJW01000007.1 Protein Homology CDS 13396 14187 . + 0 ID=cds-WP_001262195.1;Parent=gene-C9E95_RS00570;Dbxref=GenBank:WP_001262195.1;Name=WP_001262195.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460798.1;locus_tag=C9E95_RS00570;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_001262195.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 14399 14638 . - . ID=gene-C9E95_RS00575;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=C9E95_RS00575;old_locus_tag=C9E95_00570 NZ_PYJW01000007.1 Protein Homology CDS 14399 14638 . - 0 ID=cds-WP_001236777.1;Parent=gene-C9E95_RS00575;Dbxref=GenBank:WP_001236777.1;Name=WP_001236777.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460797.1;locus_tag=C9E95_RS00575;product=invasion protein YobH;protein_id=WP_001236777.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 14796 14939 . + . ID=gene-C9E95_RS00580;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=C9E95_RS00580;old_locus_tag=C9E95_00575 NZ_PYJW01000007.1 Protein Homology CDS 14796 14939 . + 0 ID=cds-WP_000714547.1;Parent=gene-C9E95_RS00580;Dbxref=GenBank:WP_000714547.1;Name=WP_000714547.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460796.1;locus_tag=C9E95_RS00580;product=PhoP/PhoQ regulator MgrB;protein_id=WP_000714547.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 15010 15297 . + . ID=gene-C9E95_RS00585;Name=C9E95_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00585;old_locus_tag=C9E95_00580 NZ_PYJW01000007.1 Protein Homology CDS 15010 15297 . + 0 ID=cds-WP_001000660.1;Parent=gene-C9E95_RS00585;Dbxref=GenBank:WP_001000660.1;Name=WP_001000660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460795.1;locus_tag=C9E95_RS00585;product=YebO family protein;protein_id=WP_001000660.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 15946 16089 . + . ID=gene-C9E95_RS00590;Name=C9E95_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00590;old_locus_tag=C9E95_00585 NZ_PYJW01000007.1 Protein Homology CDS 15946 16089 . + 0 ID=cds-WP_001537930.1;Parent=gene-C9E95_RS00590;Dbxref=GenBank:WP_001537930.1;Name=WP_001537930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460794.1;locus_tag=C9E95_RS00590;product=DUF2627 domain-containing protein;protein_id=WP_001537930.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 16102 16311 . + . ID=gene-C9E95_RS00595;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=C9E95_RS00595;old_locus_tag=C9E95_00590 NZ_PYJW01000007.1 Protein Homology CDS 16102 16311 . + 0 ID=cds-WP_001062678.1;Parent=gene-C9E95_RS00595;Dbxref=GenBank:WP_001062678.1;Name=WP_001062678.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=C9E95_RS00595;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 16531 18276 . + . ID=gene-C9E95_RS00600;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=C9E95_RS00600;old_locus_tag=C9E95_00595 NZ_PYJW01000007.1 Protein Homology CDS 16531 18276 . + 0 ID=cds-WP_000730322.1;Parent=gene-C9E95_RS00600;Dbxref=GenBank:WP_000730322.1;Name=WP_000730322.1;Ontology_term=GO:0009252,GO:0051301,GO:0008658,GO:0008955,GO:0005886;gbkey=CDS;gene=ftsI;go_component=plasma membrane|0005886||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460792.1;locus_tag=C9E95_RS00600;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000730322.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 18342 19151 . + . ID=gene-C9E95_RS00605;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=C9E95_RS00605;old_locus_tag=C9E95_00600 NZ_PYJW01000007.1 Protein Homology CDS 18342 19151 . + 0 ID=cds-WP_000010923.1;Parent=gene-C9E95_RS00605;Dbxref=GenBank:WP_000010923.1;Name=WP_000010923.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460791.1;locus_tag=C9E95_RS00605;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_000010923.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 19148 19714 . - . ID=gene-C9E95_RS00610;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=C9E95_RS00610;old_locus_tag=C9E95_00605 NZ_PYJW01000007.1 Protein Homology CDS 19148 19714 . - 0 ID=cds-WP_001518359.1;Parent=gene-C9E95_RS00610;Dbxref=GenBank:WP_001518359.1;Name=WP_001518359.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=C9E95_RS00610;product=manganese efflux pump MntP;protein_id=WP_001518359.1;transl_table=11 NZ_PYJW01000007.1 cmsearch riboswitch 19826 19927 . - . ID=id-NZ_PYJW01000007.1:19826..19927;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PYJW01000007.1 RefSeq gene 20124 20582 . - . ID=gene-C9E95_RS00615;Name=C9E95_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00615;old_locus_tag=C9E95_00615 NZ_PYJW01000007.1 Protein Homology CDS 20124 20582 . - 0 ID=cds-WP_000156280.1;Parent=gene-C9E95_RS00615;Dbxref=GenBank:WP_000156280.1;Name=WP_000156280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=C9E95_RS00615;product=DUF986 family protein;protein_id=WP_000156280.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 20641 21492 . - . ID=gene-C9E95_RS00620;Name=C9E95_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00620;old_locus_tag=C9E95_00620 NZ_PYJW01000007.1 Protein Homology CDS 20641 21492 . - 0 ID=cds-WP_001518647.1;Parent=gene-C9E95_RS00620;Dbxref=GenBank:WP_001518647.1;Name=WP_001518647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228151.1;locus_tag=C9E95_RS00620;product=PTS mannose transporter subunit IID;protein_id=WP_001518647.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 21505 22305 . - . ID=gene-C9E95_RS00625;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=C9E95_RS00625;old_locus_tag=C9E95_00625 NZ_PYJW01000007.1 Protein Homology CDS 21505 22305 . - 0 ID=cds-WP_000406918.1;Parent=gene-C9E95_RS00625;Dbxref=GenBank:WP_000406918.1;Name=WP_000406918.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=C9E95_RS00625;product=PTS mannose transporter subunit IIC;protein_id=WP_000406918.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 22358 23326 . - . ID=gene-C9E95_RS00630;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=C9E95_RS00630;old_locus_tag=C9E95_00630 NZ_PYJW01000007.1 Protein Homology CDS 22358 23326 . - 0 ID=cds-WP_000150521.1;Parent=gene-C9E95_RS00630;Dbxref=GenBank:WP_000150521.1;Name=WP_000150521.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460786.1;locus_tag=C9E95_RS00630;product=PTS mannose transporter subunit IIAB;protein_id=WP_000150521.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 23644 23811 . + . ID=gene-C9E95_RS23685;Name=C9E95_RS23685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23685 NZ_PYJW01000007.1 Protein Homology CDS 23644 23811 . + 0 ID=cds-WP_370739650.1;Parent=gene-C9E95_RS23685;Dbxref=GenBank:WP_370739650.1;Name=WP_370739650.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046943.2;locus_tag=C9E95_RS23685;product=protein YoaL;protein_id=WP_370739650.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 23799 25358 . + . ID=gene-C9E95_RS00635;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=C9E95_RS00635;old_locus_tag=C9E95_00640 NZ_PYJW01000007.1 Protein Homology CDS 23799 25358 . + 0 ID=cds-WP_000421815.1;Parent=gene-C9E95_RS00635;Dbxref=GenBank:WP_000421815.1;Name=WP_000421815.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460784.2;locus_tag=C9E95_RS00635;product=CNNM family cation transport protein YoaE;protein_id=WP_000421815.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 25380 26981 . - . ID=gene-C9E95_RS00640;Name=C9E95_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00640;old_locus_tag=C9E95_00645 NZ_PYJW01000007.1 Protein Homology CDS 25380 26981 . - 0 ID=cds-WP_023206803.1;Parent=gene-C9E95_RS00640;Dbxref=GenBank:WP_023206803.1;Name=WP_023206803.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192512.1;locus_tag=C9E95_RS00640;product=EAL domain-containing protein;protein_id=WP_023206803.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 27119 28483 . - . ID=gene-C9E95_RS00645;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=C9E95_RS00645;old_locus_tag=C9E95_00650 NZ_PYJW01000007.1 Protein Homology CDS 27119 28483 . - 0 ID=cds-WP_000624276.1;Parent=gene-C9E95_RS00645;Dbxref=GenBank:WP_000624276.1;Name=WP_000624276.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460782.1;locus_tag=C9E95_RS00645;product=L-serine ammonia-lyase;protein_id=WP_000624276.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 28747 29325 . - . ID=gene-C9E95_RS00650;Name=C9E95_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00650;old_locus_tag=C9E95_00655 NZ_PYJW01000007.1 Protein Homology CDS 28747 29325 . - 0 ID=cds-WP_000381544.1;Parent=gene-C9E95_RS00650;Dbxref=GenBank:WP_000381544.1;Name=WP_000381544.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460781.1;locus_tag=C9E95_RS00650;product=CoA pyrophosphatase;protein_id=WP_000381544.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 29329 30693 . - . ID=gene-C9E95_RS00655;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=C9E95_RS00655;old_locus_tag=C9E95_00660 NZ_PYJW01000007.1 Protein Homology CDS 29329 30693 . - 0 ID=cds-WP_135369792.1;Parent=gene-C9E95_RS00655;Dbxref=GenBank:WP_135369792.1;Name=WP_135369792.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460780.1;locus_tag=C9E95_RS00655;product=aminodeoxychorismate synthase component 1;protein_id=WP_135369792.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 30774 30953 . + . ID=gene-C9E95_RS00660;Name=C9E95_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00660;old_locus_tag=C9E95_00665 NZ_PYJW01000007.1 Protein Homology CDS 30774 30953 . + 0 ID=cds-WP_135369793.1;Parent=gene-C9E95_RS00660;Dbxref=GenBank:WP_135369793.1;Name=WP_135369793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460779.1;locus_tag=C9E95_RS00660;product=YoaH family protein;protein_id=WP_135369793.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 30959 31303 . - . ID=gene-C9E95_RS00665;Name=C9E95_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00665;old_locus_tag=C9E95_00670 NZ_PYJW01000007.1 Protein Homology CDS 30959 31303 . - 0 ID=cds-WP_023219187.1;Parent=gene-C9E95_RS00665;Dbxref=GenBank:WP_023219187.1;Name=WP_023219187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460778.1;locus_tag=C9E95_RS00665;product=RidA family protein;protein_id=WP_023219187.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 31434 33344 . + . ID=gene-C9E95_RS00670;Name=C9E95_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00670;old_locus_tag=C9E95_00675 NZ_PYJW01000007.1 Protein Homology CDS 31434 33344 . + 0 ID=cds-WP_000128807.1;Parent=gene-C9E95_RS00670;Dbxref=GenBank:WP_000128807.1;Name=WP_000128807.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460777.1;locus_tag=C9E95_RS00670;product=ATP-dependent DNA helicase;protein_id=WP_000128807.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 33402 34097 . + . ID=gene-C9E95_RS00675;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=C9E95_RS00675;old_locus_tag=C9E95_00680 NZ_PYJW01000007.1 Protein Homology CDS 33402 34097 . + 0 ID=cds-WP_001221014.1;Parent=gene-C9E95_RS00675;Dbxref=GenBank:WP_001221014.1;Name=WP_001221014.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460776.1;locus_tag=C9E95_RS00675;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_001221014.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 34169 34750 . + . ID=gene-C9E95_RS00680;Name=C9E95_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00680;old_locus_tag=C9E95_00685 NZ_PYJW01000007.1 Protein Homology CDS 34169 34750 . + 0 ID=cds-WP_000290594.1;Parent=gene-C9E95_RS00680;Dbxref=GenBank:WP_000290594.1;Name=WP_000290594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460775.1;locus_tag=C9E95_RS00680;product=Slp family lipoprotein;protein_id=WP_000290594.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 34955 36640 . + . ID=gene-C9E95_RS00685;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=C9E95_RS00685;old_locus_tag=C9E95_00695 NZ_PYJW01000007.1 Protein Homology CDS 34955 36640 . + 0 ID=cds-WP_001532413.1;Parent=gene-C9E95_RS00685;Dbxref=GenBank:WP_001532413.1;Name=WP_001532413.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460774.1;locus_tag=C9E95_RS00685;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_001532413.1;transl_table=11 NZ_PYJW01000007.1 RefSeq gene 36713 37840 . + . ID=gene-C9E95_RS00690;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=C9E95_RS00690;old_locus_tag=C9E95_00700 NZ_PYJW01000007.1 Protein Homology CDS 36713 37840 . + 0 ID=cds-WP_001109134.1;Parent=gene-C9E95_RS00690;Dbxref=GenBank:WP_001109134.1;Name=WP_001109134.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416318.1;locus_tag=C9E95_RS00690;product=ribonuclease D;protein_id=WP_001109134.1;transl_table=11 ##sequence-region NZ_PYJW01000020.1 1 617 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000020.1 RefSeq region 1 617 . + . ID=NZ_PYJW01000020.1:1..617;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000020.1 RefSeq gene 1 617 . + . ID=gene-C9E95_RS01170;Name=C9E95_RS01170;end_range=617,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9E95_RS01170;old_locus_tag=C9E95_01185;partial=true;start_range=.,1 NZ_PYJW01000020.1 cmsearch rRNA 1 617 . + . ID=rna-C9E95_RS01170;Parent=gene-C9E95_RS01170;Dbxref=RFAM:RF02541;end_range=617,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS01170;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_PYJW01000020.1 cmsearch exon 1 617 . + . ID=exon-C9E95_RS01170-1;Parent=rna-C9E95_RS01170;Dbxref=RFAM:RF02541;end_range=617,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS01170;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_PYJW01000154.1 1 37031 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000154.1 RefSeq region 1 37031 . + . ID=NZ_PYJW01000154.1:1..37031;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000154.1 RefSeq gene 516 3185 . + . ID=gene-C9E95_RS18090;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=C9E95_RS18090;old_locus_tag=C9E95_18540 NZ_PYJW01000154.1 Protein Homology CDS 516 3185 . + 0 ID=cds-WP_000083205.1;Parent=gene-C9E95_RS18090;Dbxref=GenBank:WP_000083205.1;Name=WP_000083205.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=C9E95_RS18090;product=phosphotransferase RcsD;protein_id=WP_000083205.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 3202 3852 . + . ID=gene-C9E95_RS18095;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=C9E95_RS18095;old_locus_tag=C9E95_18545 NZ_PYJW01000154.1 Protein Homology CDS 3202 3852 . + 0 ID=cds-WP_001061919.1;Parent=gene-C9E95_RS18095;Dbxref=GenBank:WP_001061919.1;Name=WP_001061919.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461212.1;locus_tag=C9E95_RS18095;product=response regulator transcription factor RcsB;protein_id=WP_001061919.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 3955 6801 . - . ID=gene-C9E95_RS18100;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=C9E95_RS18100;old_locus_tag=C9E95_18550 NZ_PYJW01000154.1 Protein Homology CDS 3955 6801 . - 0 ID=cds-WP_000876081.1;Parent=gene-C9E95_RS18100;Dbxref=GenBank:WP_000876081.1;Name=WP_000876081.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461213.1;locus_tag=C9E95_RS18100;product=two-component system sensor histidine kinase RcsC;protein_id=WP_000876081.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 6919 9555 . - . ID=gene-C9E95_RS18105;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=C9E95_RS18105;old_locus_tag=C9E95_18555 NZ_PYJW01000154.1 Protein Homology CDS 6919 9555 . - 0 ID=cds-WP_001281271.1;Parent=gene-C9E95_RS18105;Dbxref=GenBank:WP_001281271.1;Name=WP_001281271.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=C9E95_RS18105;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_001281271.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 9965 11167 . - . ID=gene-C9E95_RS18110;Name=C9E95_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18110;old_locus_tag=C9E95_18565 NZ_PYJW01000154.1 Protein Homology CDS 9965 11167 . - 0 ID=cds-WP_000705581.1;Parent=gene-C9E95_RS18110;Dbxref=GenBank:WP_000705581.1;Name=WP_000705581.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461215.1;locus_tag=C9E95_RS18110;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_000705581.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 11182 12507 . - . ID=gene-C9E95_RS18115;Name=C9E95_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18115;old_locus_tag=C9E95_18570 NZ_PYJW01000154.1 Protein Homology CDS 11182 12507 . - 0 ID=cds-WP_000098078.1;Parent=gene-C9E95_RS18115;Dbxref=GenBank:WP_000098078.1;Name=WP_000098078.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=C9E95_RS18115;product=MFS transporter;protein_id=WP_000098078.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 12557 13441 . + . ID=gene-C9E95_RS18120;Name=C9E95_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18120;old_locus_tag=C9E95_18575 NZ_PYJW01000154.1 Protein Homology CDS 12557 13441 . + 0 ID=cds-WP_000944714.1;Parent=gene-C9E95_RS18120;Dbxref=GenBank:WP_000944714.1;Name=WP_000944714.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=C9E95_RS18120;product=GntR family transcriptional regulator;protein_id=WP_000944714.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 13524 14252 . + . ID=gene-C9E95_RS18125;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=C9E95_RS18125;old_locus_tag=C9E95_18580 NZ_PYJW01000154.1 Protein Homology CDS 13524 14252 . + 0 ID=cds-WP_001091009.1;Parent=gene-C9E95_RS18125;Dbxref=GenBank:WP_001091009.1;Name=WP_001091009.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461218.1;locus_tag=C9E95_RS18125;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_001091009.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 14608 16893 . + . ID=gene-C9E95_RS18130;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=C9E95_RS18130;old_locus_tag=C9E95_18585 NZ_PYJW01000154.1 Protein Homology CDS 14608 16893 . + 0 ID=cds-WP_001076499.1;Parent=gene-C9E95_RS18130;Dbxref=GenBank:WP_001076499.1;Name=WP_001076499.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=C9E95_RS18130;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_001076499.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 17006 18136 . + . ID=gene-C9E95_RS18135;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=C9E95_RS18135;old_locus_tag=C9E95_18590 NZ_PYJW01000154.1 Protein Homology CDS 17006 18136 . + 0 ID=cds-WP_000332026.1;Parent=gene-C9E95_RS18135;Dbxref=GenBank:WP_000332026.1;Name=WP_000332026.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=C9E95_RS18135;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000332026.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 18136 18390 . + . ID=gene-C9E95_RS18140;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=C9E95_RS18140;old_locus_tag=C9E95_18595 NZ_PYJW01000154.1 Protein Homology CDS 18136 18390 . + 0 ID=cds-WP_000533921.1;Parent=gene-C9E95_RS18140;Dbxref=GenBank:WP_000533921.1;Name=WP_000533921.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461221.1;locus_tag=C9E95_RS18140;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000533921.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 18392 19582 . - . ID=gene-C9E95_RS18145;Name=C9E95_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18145;old_locus_tag=C9E95_18600 NZ_PYJW01000154.1 Protein Homology CDS 18392 19582 . - 0 ID=cds-WP_000660247.1;Parent=gene-C9E95_RS18145;Dbxref=GenBank:WP_000660247.1;Name=WP_000660247.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461222.1;locus_tag=C9E95_RS18145;product=MFS transporter;protein_id=WP_000660247.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 19744 20622 . + . ID=gene-C9E95_RS18150;Name=C9E95_RS18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18150;old_locus_tag=C9E95_18605 NZ_PYJW01000154.1 Protein Homology CDS 19744 20622 . + 0 ID=cds-WP_000176719.1;Parent=gene-C9E95_RS18150;Dbxref=GenBank:WP_000176719.1;Name=WP_000176719.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461223.1;locus_tag=C9E95_RS18150;product=LysR family transcriptional regulator;protein_id=WP_000176719.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 20738 21808 . - . ID=gene-C9E95_RS18155;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=C9E95_RS18155;old_locus_tag=C9E95_18610 NZ_PYJW01000154.1 Protein Homology CDS 20738 21808 . - 0 ID=cds-WP_000858952.1;Parent=gene-C9E95_RS18155;Dbxref=GenBank:WP_000858952.1;Name=WP_000858952.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461224.1;locus_tag=C9E95_RS18155;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000858952.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 21813 23171 . - . ID=gene-C9E95_RS18160;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=C9E95_RS18160;old_locus_tag=C9E95_18615 NZ_PYJW01000154.1 Protein Homology CDS 21813 23171 . - 0 ID=cds-WP_000948739.1;Parent=gene-C9E95_RS18160;Dbxref=GenBank:WP_000948739.1;Name=WP_000948739.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461225.1;locus_tag=C9E95_RS18160;product=glycerol-3-phosphate transporter;protein_id=WP_000948739.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 23444 25072 . + . ID=gene-C9E95_RS18165;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=C9E95_RS18165;old_locus_tag=C9E95_18620 NZ_PYJW01000154.1 Protein Homology CDS 23444 25072 . + 0 ID=cds-WP_000857207.1;Parent=gene-C9E95_RS18165;Dbxref=GenBank:WP_000857207.1;Name=WP_000857207.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461226.1;locus_tag=C9E95_RS18165;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_000857207.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 25062 26321 . + . ID=gene-C9E95_RS18170;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=C9E95_RS18170;old_locus_tag=C9E95_18625 NZ_PYJW01000154.1 Protein Homology CDS 25062 26321 . + 0 ID=cds-WP_000667152.1;Parent=gene-C9E95_RS18170;Dbxref=GenBank:WP_000667152.1;Name=WP_000667152.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461227.1;locus_tag=C9E95_RS18170;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_000667152.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 26318 27508 . + . ID=gene-C9E95_RS18175;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=C9E95_RS18175;old_locus_tag=C9E95_18630 NZ_PYJW01000154.1 Protein Homology CDS 26318 27508 . + 0 ID=cds-WP_001285726.1;Parent=gene-C9E95_RS18175;Dbxref=GenBank:WP_001285726.1;Name=WP_001285726.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461228.1;locus_tag=C9E95_RS18175;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_001285726.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 27933 28955 . + . ID=gene-C9E95_RS18185;Name=sseL;gbkey=Gene;gene=sseL;gene_biotype=protein_coding;locus_tag=C9E95_RS18185;old_locus_tag=C9E95_18640 NZ_PYJW01000154.1 Protein Homology CDS 27933 28955 . + 0 ID=cds-WP_023993402.1;Parent=gene-C9E95_RS18185;Dbxref=GenBank:WP_023993402.1;Name=WP_023993402.1;gbkey=CDS;gene=sseL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017745.1;locus_tag=C9E95_RS18185;product=SPI-2 type III secretion system effector deubiquitinase SseL;protein_id=WP_023993402.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 29042 29218 . - . ID=gene-C9E95_RS18190;Name=C9E95_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18190;old_locus_tag=C9E95_18645 NZ_PYJW01000154.1 Protein Homology CDS 29042 29218 . - 0 ID=cds-WP_001112766.1;Parent=gene-C9E95_RS18190;Dbxref=GenBank:WP_001112766.1;Name=WP_001112766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461230.1;locus_tag=C9E95_RS18190;product=hypothetical protein;protein_id=WP_001112766.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 29224 30027 . - . ID=gene-C9E95_RS18195;Name=yfaU;gbkey=Gene;gene=yfaU;gene_biotype=protein_coding;locus_tag=C9E95_RS18195;old_locus_tag=C9E95_18650 NZ_PYJW01000154.1 Protein Homology CDS 29224 30027 . - 0 ID=cds-WP_000992941.1;Parent=gene-C9E95_RS18195;Dbxref=GenBank:WP_000992941.1;Name=WP_000992941.1;gbkey=CDS;gene=yfaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461231.1;locus_tag=C9E95_RS18195;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WP_000992941.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 30053 31342 . - . ID=gene-C9E95_RS18200;Name=C9E95_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18200;old_locus_tag=C9E95_18655 NZ_PYJW01000154.1 Protein Homology CDS 30053 31342 . - 0 ID=cds-WP_000028931.1;Parent=gene-C9E95_RS18200;Dbxref=GenBank:WP_000028931.1;Name=WP_000028931.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461232.1;locus_tag=C9E95_RS18200;product=MFS transporter;protein_id=WP_000028931.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 31398 32603 . - . ID=gene-C9E95_RS18205;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=protein_coding;locus_tag=C9E95_RS18205;old_locus_tag=C9E95_18660 NZ_PYJW01000154.1 Protein Homology CDS 31398 32603 . - 0 ID=cds-WP_023993404.1;Parent=gene-C9E95_RS18205;Dbxref=GenBank:WP_023993404.1;Name=WP_023993404.1;Ontology_term=GO:0050032;gbkey=CDS;gene=rhmD;go_function=L-rhamnonate dehydratase activity|0050032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416750.2;locus_tag=C9E95_RS18205;product=L-rhamnonate dehydratase;protein_id=WP_023993404.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 32617 33399 . - . ID=gene-C9E95_RS18210;Name=C9E95_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18210;old_locus_tag=C9E95_18665 NZ_PYJW01000154.1 Protein Homology CDS 32617 33399 . - 0 ID=cds-WP_000894170.1;Parent=gene-C9E95_RS18210;Dbxref=GenBank:WP_000894170.1;Name=WP_000894170.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461234.1;locus_tag=C9E95_RS18210;product=IclR family transcriptional regulator;protein_id=WP_000894170.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 33649 34845 . - . ID=gene-C9E95_RS18215;Name=C9E95_RS18215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18215;old_locus_tag=C9E95_18670 NZ_PYJW01000154.1 Protein Homology CDS 33649 34845 . - 0 ID=cds-WP_023993405.1;Parent=gene-C9E95_RS18215;Dbxref=GenBank:WP_023993405.1;Name=WP_023993405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461235.1;locus_tag=C9E95_RS18215;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_023993405.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 34960 35502 . - . ID=gene-C9E95_RS18220;Name=C9E95_RS18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18220;old_locus_tag=C9E95_18675 NZ_PYJW01000154.1 Protein Homology CDS 34960 35502 . - 0 ID=cds-WP_001670658.1;Parent=gene-C9E95_RS18220;Dbxref=GenBank:WP_001670658.1;Name=WP_001670658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311165.2;locus_tag=C9E95_RS18220;product=YfaZ family protein;protein_id=WP_001670658.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 35781 36206 . + . ID=gene-C9E95_RS18225;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=C9E95_RS18225;old_locus_tag=C9E95_18680 NZ_PYJW01000154.1 Protein Homology CDS 35781 36206 . + 0 ID=cds-WP_001249900.1;Parent=gene-C9E95_RS18225;Dbxref=GenBank:WP_001249900.1;Name=WP_001249900.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461237.1;locus_tag=C9E95_RS18225;product=nucleoside triphosphatase NudI;protein_id=WP_001249900.1;transl_table=11 NZ_PYJW01000154.1 RefSeq gene 36251 36856 . - . ID=gene-C9E95_RS18230;Name=pmrG;gbkey=Gene;gene=pmrG;gene_biotype=protein_coding;locus_tag=C9E95_RS18230;old_locus_tag=C9E95_18685 NZ_PYJW01000154.1 Protein Homology CDS 36251 36856 . - 0 ID=cds-WP_000879246.1;Parent=gene-C9E95_RS18230;Dbxref=GenBank:WP_000879246.1;Name=WP_000879246.1;gbkey=CDS;gene=pmrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461238.1;locus_tag=C9E95_RS18230;product=lipopolysaccharide core heptose(II)-phosphate phosphatase PmrG;protein_id=WP_000879246.1;transl_table=11 ##sequence-region NZ_PYJW01000077.1 1 35981 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000077.1 RefSeq region 1 35981 . + . ID=NZ_PYJW01000077.1:1..35981;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000077.1 RefSeq pseudogene 148 369 . + . ID=gene-C9E95_RS07800;Name=C9E95_RS07800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS07800;old_locus_tag=C9E95_07980;partial=true;pseudo=true;start_range=.,148 NZ_PYJW01000077.1 Protein Homology CDS 148 369 . + 0 ID=cds-C9E95_RS07800;Parent=gene-C9E95_RS07800;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006673699.1;locus_tag=C9E95_RS07800;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,148;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 589 1809 . + . ID=gene-C9E95_RS07805;Name=C9E95_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07805;old_locus_tag=C9E95_07985 NZ_PYJW01000077.1 Protein Homology CDS 589 1809 . + 0 ID=cds-WP_000343758.1;Parent=gene-C9E95_RS07805;Dbxref=GenBank:WP_000343758.1;Name=WP_000343758.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_065945178.1;locus_tag=C9E95_RS07805;product=ISL3 family transposase;protein_id=WP_000343758.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 1806 2231 . - . ID=gene-C9E95_RS07810;Name=C9E95_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07810;old_locus_tag=C9E95_07990 NZ_PYJW01000077.1 Protein Homology CDS 1806 2231 . - 0 ID=cds-WP_024143826.1;Parent=gene-C9E95_RS07810;Dbxref=GenBank:WP_024143826.1;Name=WP_024143826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015675523.1;locus_tag=C9E95_RS07810;product=hypothetical protein;protein_id=WP_024143826.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 2736 5348 . + . ID=gene-C9E95_RS07815;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=C9E95_RS07815;old_locus_tag=C9E95_07995 NZ_PYJW01000077.1 Protein Homology CDS 2736 5348 . + 0 ID=cds-WP_000193775.1;Parent=gene-C9E95_RS07815;Dbxref=GenBank:WP_000193775.1;Name=WP_000193775.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=C9E95_RS07815;product=aminopeptidase N;protein_id=WP_000193775.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 5556 6566 . + . ID=gene-C9E95_RS07820;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=C9E95_RS07820;old_locus_tag=C9E95_08000 NZ_PYJW01000077.1 Protein Homology CDS 5556 6566 . + 0 ID=cds-WP_000291723.1;Parent=gene-C9E95_RS07820;Dbxref=GenBank:WP_000291723.1;Name=WP_000291723.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460032.1;locus_tag=C9E95_RS07820;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_000291723.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 6732 7274 . + . ID=gene-C9E95_RS07825;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=C9E95_RS07825;old_locus_tag=C9E95_08005 NZ_PYJW01000077.1 Protein Homology CDS 6732 7274 . + 0 ID=cds-WP_001220671.1;Parent=gene-C9E95_RS07825;Dbxref=GenBank:WP_001220671.1;Name=WP_001220671.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460033.1;locus_tag=C9E95_RS07825;product=cell division protein ZapC;protein_id=WP_001220671.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 7271 8380 . - . ID=gene-C9E95_RS07830;Name=C9E95_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07830;old_locus_tag=C9E95_08010 NZ_PYJW01000077.1 Protein Homology CDS 7271 8380 . - 0 ID=cds-WP_000224078.1;Parent=gene-C9E95_RS07830;Dbxref=GenBank:WP_000224078.1;Name=WP_000224078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460034.1;locus_tag=C9E95_RS07830;product=YcbX family protein;protein_id=WP_000224078.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 8479 10587 . + . ID=gene-C9E95_RS07835;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=C9E95_RS07835;old_locus_tag=C9E95_08015 NZ_PYJW01000077.1 Protein Homology CDS 8479 10587 . + 0 ID=cds-WP_001086485.1;Parent=gene-C9E95_RS07835;Dbxref=GenBank:WP_001086485.1;Name=WP_001086485.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460035.1;locus_tag=C9E95_RS07835;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_001086485.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 10600 12507 . + . ID=gene-C9E95_RS07840;Name=C9E95_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07840;old_locus_tag=C9E95_08020 NZ_PYJW01000077.1 Protein Homology CDS 10600 12507 . + 0 ID=cds-WP_000053051.1;Parent=gene-C9E95_RS07840;Dbxref=GenBank:WP_000053051.1;Name=WP_000053051.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=C9E95_RS07840;product=ABC transporter ATP-binding protein;protein_id=WP_000053051.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 12522 13775 . + . ID=gene-C9E95_RS07845;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=C9E95_RS07845;old_locus_tag=C9E95_08025 NZ_PYJW01000077.1 Protein Homology CDS 12522 13775 . + 0 ID=cds-WP_000333152.1;Parent=gene-C9E95_RS07845;Dbxref=GenBank:WP_000333152.1;Name=WP_000333152.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460037.1;locus_tag=C9E95_RS07845;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_000333152.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 13780 15420 . + . ID=gene-C9E95_RS07850;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=C9E95_RS07850;old_locus_tag=C9E95_08030 NZ_PYJW01000077.1 Protein Homology CDS 13780 15420 . + 0 ID=cds-WP_000433416.1;Parent=gene-C9E95_RS07850;Dbxref=GenBank:WP_000433416.1;Name=WP_000433416.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460038.1;locus_tag=C9E95_RS07850;product=intermembrane transport protein PqiB;protein_id=WP_000433416.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 15417 15980 . + . ID=gene-C9E95_RS07855;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=C9E95_RS07855;old_locus_tag=C9E95_08035 NZ_PYJW01000077.1 Protein Homology CDS 15417 15980 . + 0 ID=cds-WP_000759136.1;Parent=gene-C9E95_RS07855;Dbxref=GenBank:WP_000759136.1;Name=WP_000759136.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460039.1;locus_tag=C9E95_RS07855;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_000759136.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 16236 16403 . + . ID=gene-C9E95_RS07860;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=C9E95_RS07860;old_locus_tag=C9E95_08040 NZ_PYJW01000077.1 Protein Homology CDS 16236 16403 . + 0 ID=cds-WP_001537784.1;Parent=gene-C9E95_RS07860;Dbxref=GenBank:WP_001537784.1;Name=WP_001537784.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=C9E95_RS07860;product=ribosome modulation factor;protein_id=WP_001537784.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 16503 17021 . - . ID=gene-C9E95_RS07865;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=C9E95_RS07865;old_locus_tag=C9E95_08045 NZ_PYJW01000077.1 Protein Homology CDS 16503 17021 . - 0 ID=cds-WP_000227928.1;Parent=gene-C9E95_RS07865;Dbxref=GenBank:WP_000227928.1;Name=WP_000227928.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=C9E95_RS07865;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_000227928.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 17090 18850 . - . ID=gene-C9E95_RS07870;Name=C9E95_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07870;old_locus_tag=C9E95_08050 NZ_PYJW01000077.1 Protein Homology CDS 17090 18850 . - 0 ID=cds-WP_135369829.1;Parent=gene-C9E95_RS07870;Dbxref=GenBank:WP_135369829.1;Name=WP_135369829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460042.1;locus_tag=C9E95_RS07870;product=AAA family ATPase;protein_id=WP_135369829.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 19036 19488 . + . ID=gene-C9E95_RS07875;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=C9E95_RS07875;old_locus_tag=C9E95_08055 NZ_PYJW01000077.1 Protein Homology CDS 19036 19488 . + 0 ID=cds-WP_000877172.1;Parent=gene-C9E95_RS07875;Dbxref=GenBank:WP_000877172.1;Name=WP_000877172.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460043.1;locus_tag=C9E95_RS07875;product=macrodomain Ter protein MatP;protein_id=WP_000877172.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 19560 20612 . - . ID=gene-C9E95_RS07880;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=C9E95_RS07880;old_locus_tag=C9E95_08060 NZ_PYJW01000077.1 Protein Homology CDS 19560 20612 . - 0 ID=cds-WP_001670727.1;Parent=gene-C9E95_RS07880;Dbxref=GenBank:WP_001670727.1;Name=WP_001670727.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460044.1;locus_tag=C9E95_RS07880;product=porin OmpA;protein_id=WP_001670727.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 20969 21478 . - . ID=gene-C9E95_RS07885;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=C9E95_RS07885;old_locus_tag=C9E95_08065 NZ_PYJW01000077.1 Protein Homology CDS 20969 21478 . - 0 ID=cds-WP_000288732.1;Parent=gene-C9E95_RS07885;Dbxref=GenBank:WP_000288732.1;Name=WP_000288732.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460045.1;locus_tag=C9E95_RS07885;product=SOS-induced cell division inhibitor SulA;protein_id=WP_000288732.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 21695 22300 . + . ID=gene-C9E95_RS07890;Name=C9E95_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07890;old_locus_tag=C9E95_08070 NZ_PYJW01000077.1 Protein Homology CDS 21695 22300 . + 0 ID=cds-WP_001202375.1;Parent=gene-C9E95_RS07890;Dbxref=GenBank:WP_001202375.1;Name=WP_001202375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460046.1;locus_tag=C9E95_RS07890;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_001202375.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 22287 24440 . - . ID=gene-C9E95_RS07895;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=C9E95_RS07895;old_locus_tag=C9E95_08075 NZ_PYJW01000077.1 Protein Homology CDS 22287 24440 . - 0 ID=cds-WP_000950876.1;Parent=gene-C9E95_RS07895;Dbxref=GenBank:WP_000950876.1;Name=WP_000950876.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460047.1;locus_tag=C9E95_RS07895;product=YccS family putative transporter;protein_id=WP_000950876.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 24459 24905 . - . ID=gene-C9E95_RS07900;Name=C9E95_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07900;old_locus_tag=C9E95_08080 NZ_PYJW01000077.1 Protein Homology CDS 24459 24905 . - 0 ID=cds-WP_001261222.1;Parent=gene-C9E95_RS07900;Dbxref=GenBank:WP_001261222.1;Name=WP_001261222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460048.1;locus_tag=C9E95_RS07900;product=YccF domain-containing protein;protein_id=WP_001261222.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 25029 27083 . + . ID=gene-C9E95_RS07905;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=C9E95_RS07905;old_locus_tag=C9E95_08085 NZ_PYJW01000077.1 Protein Homology CDS 25029 27083 . + 0 ID=cds-WP_001524469.1;Parent=gene-C9E95_RS07905;Dbxref=GenBank:WP_001524469.1;Name=WP_001524469.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460049.1;locus_tag=C9E95_RS07905;product=DNA helicase IV;protein_id=WP_001524469.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 27119 27577 . - . ID=gene-C9E95_RS07910;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=C9E95_RS07910;old_locus_tag=C9E95_08090 NZ_PYJW01000077.1 Protein Homology CDS 27119 27577 . - 0 ID=cds-WP_000424187.1;Parent=gene-C9E95_RS07910;Dbxref=GenBank:WP_000424187.1;Name=WP_000424187.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460050.1;locus_tag=C9E95_RS07910;product=methylglyoxal synthase;protein_id=WP_000424187.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 27672 28334 . - . ID=gene-C9E95_RS07915;Name=C9E95_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07915;old_locus_tag=C9E95_08095 NZ_PYJW01000077.1 Protein Homology CDS 27672 28334 . - 0 ID=cds-WP_000847719.1;Parent=gene-C9E95_RS07915;Dbxref=GenBank:WP_000847719.1;Name=WP_000847719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460051.1;locus_tag=C9E95_RS07915;product=DUF2057 family protein;protein_id=WP_000847719.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 28508 28921 . + . ID=gene-C9E95_RS07920;Name=C9E95_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07920;old_locus_tag=C9E95_08100 NZ_PYJW01000077.1 Protein Homology CDS 28508 28921 . + 0 ID=cds-WP_001537782.1;Parent=gene-C9E95_RS07920;Dbxref=GenBank:WP_001537782.1;Name=WP_001537782.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=C9E95_RS07920;product=CoA-binding protein;protein_id=WP_001537782.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 28966 29283 . - . ID=gene-C9E95_RS07925;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=C9E95_RS07925;old_locus_tag=C9E95_08105 NZ_PYJW01000077.1 Protein Homology CDS 28966 29283 . - 0 ID=cds-WP_000561983.1;Parent=gene-C9E95_RS07925;Dbxref=GenBank:WP_000561983.1;Name=WP_000561983.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=C9E95_RS07925;product=heat shock protein HspQ;protein_id=WP_000561983.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 29341 30552 . - . ID=gene-C9E95_RS07930;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=C9E95_RS07930;old_locus_tag=C9E95_08110 NZ_PYJW01000077.1 Protein Homology CDS 29341 30552 . - 0 ID=cds-WP_000140480.1;Parent=gene-C9E95_RS07930;Dbxref=GenBank:WP_000140480.1;Name=WP_000140480.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=C9E95_RS07930;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_000140480.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 30767 31315 . + . ID=gene-C9E95_RS07935;Name=C9E95_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07935;old_locus_tag=C9E95_08115 NZ_PYJW01000077.1 Protein Homology CDS 30767 31315 . + 0 ID=cds-WP_079841770.1;Parent=gene-C9E95_RS07935;Dbxref=GenBank:WP_079841770.1;Name=WP_079841770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460055.1;locus_tag=C9E95_RS07935;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_079841770.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 31341 32120 . + . ID=gene-C9E95_RS07940;Name=C9E95_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07940;old_locus_tag=C9E95_08120 NZ_PYJW01000077.1 Protein Homology CDS 31341 32120 . + 0 ID=cds-WP_023993503.1;Parent=gene-C9E95_RS07940;Dbxref=GenBank:WP_023993503.1;Name=WP_023993503.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=C9E95_RS07940;product=helix-turn-helix transcriptional regulator;protein_id=WP_023993503.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 32169 32450 . + . ID=gene-C9E95_RS07945;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=C9E95_RS07945;old_locus_tag=C9E95_08125 NZ_PYJW01000077.1 Protein Homology CDS 32169 32450 . + 0 ID=cds-WP_000072884.1;Parent=gene-C9E95_RS07945;Dbxref=GenBank:WP_000072884.1;Name=WP_000072884.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460057.1;locus_tag=C9E95_RS07945;product=acylphosphatase;protein_id=WP_000072884.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 32447 32776 . - . ID=gene-C9E95_RS07950;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=C9E95_RS07950;old_locus_tag=C9E95_08130 NZ_PYJW01000077.1 Protein Homology CDS 32447 32776 . - 0 ID=cds-WP_000904449.1;Parent=gene-C9E95_RS07950;Dbxref=GenBank:WP_000904449.1;Name=WP_000904449.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460058.1;locus_tag=C9E95_RS07950;product=sulfurtransferase TusE;protein_id=WP_000904449.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 32863 33522 . - . ID=gene-C9E95_RS07955;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=C9E95_RS07955;old_locus_tag=C9E95_08135 NZ_PYJW01000077.1 Protein Homology CDS 32863 33522 . - 0 ID=cds-WP_000374046.1;Parent=gene-C9E95_RS07955;Dbxref=GenBank:WP_000374046.1;Name=WP_000374046.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=C9E95_RS07955;product=FtsH protease modulator YccA;protein_id=WP_000374046.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 33917 34004 . + . ID=gene-C9E95_RS07960;Name=C9E95_RS07960;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS07960;old_locus_tag=C9E95_08140 NZ_PYJW01000077.1 tRNAscan-SE tRNA 33917 34004 . + . ID=rna-C9E95_RS07960;Parent=gene-C9E95_RS07960;anticodon=(pos:33951..33953);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS07960;product=tRNA-Ser NZ_PYJW01000077.1 tRNAscan-SE exon 33917 34004 . + . ID=exon-C9E95_RS07960-1;Parent=rna-C9E95_RS07960;anticodon=(pos:33951..33953);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS07960;product=tRNA-Ser NZ_PYJW01000077.1 RefSeq gene 34140 34820 . - . ID=gene-C9E95_RS07965;Name=pipA;gbkey=Gene;gene=pipA;gene_biotype=protein_coding;locus_tag=C9E95_RS07965;old_locus_tag=C9E95_08145 NZ_PYJW01000077.1 Protein Homology CDS 34140 34820 . - 0 ID=cds-WP_000938182.1;Parent=gene-C9E95_RS07965;Dbxref=GenBank:WP_000938182.1;Name=WP_000938182.1;gbkey=CDS;gene=pipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460060.1;locus_tag=C9E95_RS07965;product=type III secretion system effector protease PipA;protein_id=WP_000938182.1;transl_table=11 NZ_PYJW01000077.1 RefSeq gene 35043 35918 . - . ID=gene-C9E95_RS07970;Name=pipB;gbkey=Gene;gene=pipB;gene_biotype=protein_coding;locus_tag=C9E95_RS07970;old_locus_tag=C9E95_08150 NZ_PYJW01000077.1 Protein Homology CDS 35043 35918 . - 0 ID=cds-WP_080203870.1;Parent=gene-C9E95_RS07970;Dbxref=GenBank:WP_080203870.1;Name=WP_080203870.1;gbkey=CDS;gene=pipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460061.1;locus_tag=C9E95_RS07970;product=SPI-2 type III secretion system effector PipB;protein_id=WP_080203870.1;transl_table=11 ##sequence-region NZ_PYJW01000192.1 1 35764 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000192.1 RefSeq region 1 35764 . + . ID=NZ_PYJW01000192.1:1..35764;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000192.1 RefSeq gene 723 1736 . - . ID=gene-C9E95_RS22475;Name=C9E95_RS22475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22475;old_locus_tag=C9E95_23060 NZ_PYJW01000192.1 Protein Homology CDS 723 1736 . - 0 ID=cds-WP_001059351.1;Parent=gene-C9E95_RS22475;Dbxref=GenBank:WP_001059351.1;Name=WP_001059351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461709.1;locus_tag=C9E95_RS22475;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_001059351.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 1869 3284 . - . ID=gene-C9E95_RS22480;Name=C9E95_RS22480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22480;old_locus_tag=C9E95_23065 NZ_PYJW01000192.1 Protein Homology CDS 1869 3284 . - 0 ID=cds-WP_000872338.1;Parent=gene-C9E95_RS22480;Dbxref=GenBank:WP_000872338.1;Name=WP_000872338.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461710.1;locus_tag=C9E95_RS22480;product=sensor histidine kinase;protein_id=WP_000872338.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 3271 3945 . - . ID=gene-C9E95_RS22485;Name=tctD;gbkey=Gene;gene=tctD;gene_biotype=protein_coding;locus_tag=C9E95_RS22485;old_locus_tag=C9E95_23070 NZ_PYJW01000192.1 Protein Homology CDS 3271 3945 . - 0 ID=cds-WP_001237934.1;Parent=gene-C9E95_RS22485;Dbxref=GenBank:WP_001237934.1;Name=WP_001237934.1;gbkey=CDS;gene=tctD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=C9E95_RS22485;product=transcriptional regulator TctD;protein_id=WP_001237934.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 4100 5077 . + . ID=gene-C9E95_RS22490;Name=C9E95_RS22490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22490;old_locus_tag=C9E95_23075 NZ_PYJW01000192.1 Protein Homology CDS 4100 5077 . + 0 ID=cds-WP_000744413.1;Parent=gene-C9E95_RS22490;Dbxref=GenBank:WP_000744413.1;Name=WP_000744413.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=C9E95_RS22490;product=Bug family tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_000744413.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 5089 5523 . + . ID=gene-C9E95_RS22495;Name=C9E95_RS22495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22495;old_locus_tag=C9E95_23080 NZ_PYJW01000192.1 Protein Homology CDS 5089 5523 . + 0 ID=cds-WP_001574835.1;Parent=gene-C9E95_RS22495;Dbxref=GenBank:WP_001574835.1;Name=WP_001574835.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461713.3;locus_tag=C9E95_RS22495;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_001574835.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 5534 7048 . + . ID=gene-C9E95_RS22500;Name=C9E95_RS22500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22500;old_locus_tag=C9E95_23085 NZ_PYJW01000192.1 Protein Homology CDS 5534 7048 . + 0 ID=cds-WP_000382034.1;Parent=gene-C9E95_RS22500;Dbxref=GenBank:WP_000382034.1;Name=WP_000382034.1;Ontology_term=GO:0006810,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461714.1;locus_tag=C9E95_RS22500;product=tripartite tricarboxylate transporter permease;protein_id=WP_000382034.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 7352 8329 . + . ID=gene-C9E95_RS22505;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=C9E95_RS22505;old_locus_tag=C9E95_23090 NZ_PYJW01000192.1 Protein Homology CDS 7352 8329 . + 0 ID=cds-WP_000993100.1;Parent=gene-C9E95_RS22505;Dbxref=GenBank:WP_000993100.1;Name=WP_000993100.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=C9E95_RS22505;product=glutarate dioxygenase GlaH;protein_id=WP_000993100.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 8355 9623 . + . ID=gene-C9E95_RS22510;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=C9E95_RS22510;old_locus_tag=C9E95_23095 NZ_PYJW01000192.1 Protein Homology CDS 8355 9623 . + 0 ID=cds-WP_023993716.1;Parent=gene-C9E95_RS22510;Dbxref=GenBank:WP_023993716.1;Name=WP_023993716.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461716.1;locus_tag=C9E95_RS22510;product=L-2-hydroxyglutarate oxidase;protein_id=WP_023993716.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 9645 11093 . + . ID=gene-C9E95_RS22515;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=C9E95_RS22515;old_locus_tag=C9E95_23100 NZ_PYJW01000192.1 Protein Homology CDS 9645 11093 . + 0 ID=cds-WP_080204039.1;Parent=gene-C9E95_RS22515;Dbxref=GenBank:WP_080204039.1;Name=WP_080204039.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461717.1;locus_tag=C9E95_RS22515;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_080204039.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 11108 12391 . + . ID=gene-C9E95_RS22520;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=C9E95_RS22520;old_locus_tag=C9E95_23105 NZ_PYJW01000192.1 Protein Homology CDS 11108 12391 . + 0 ID=cds-WP_001650446.1;Parent=gene-C9E95_RS22520;Dbxref=GenBank:WP_001650446.1;Name=WP_001650446.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461718.1;locus_tag=C9E95_RS22520;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_001650446.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 12521 13921 . + . ID=gene-C9E95_RS22525;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=C9E95_RS22525;old_locus_tag=C9E95_23110 NZ_PYJW01000192.1 Protein Homology CDS 12521 13921 . + 0 ID=cds-WP_020899122.1;Parent=gene-C9E95_RS22525;Dbxref=GenBank:WP_020899122.1;Name=WP_020899122.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461719.1;locus_tag=C9E95_RS22525;product=GABA permease;protein_id=WP_020899122.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 13963 14640 . + . ID=gene-C9E95_RS22530;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=C9E95_RS22530;old_locus_tag=C9E95_23115 NZ_PYJW01000192.1 Protein Homology CDS 13963 14640 . + 0 ID=cds-WP_000126152.1;Parent=gene-C9E95_RS22530;Dbxref=GenBank:WP_000126152.1;Name=WP_000126152.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461720.1;locus_tag=C9E95_RS22530;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_000126152.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 14662 15111 . - . ID=gene-C9E95_RS22535;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=C9E95_RS22535;old_locus_tag=C9E95_23120 NZ_PYJW01000192.1 Protein Homology CDS 14662 15111 . - 0 ID=cds-WP_000522406.1;Parent=gene-C9E95_RS22535;Dbxref=GenBank:WP_000522406.1;Name=WP_000522406.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461721.1;locus_tag=C9E95_RS22535;product=peptidoglycan-binding protein LysM;protein_id=WP_000522406.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 15211 15369 . - . ID=gene-C9E95_RS22545;Name=C9E95_RS22545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22545;old_locus_tag=C9E95_23130 NZ_PYJW01000192.1 Protein Homology CDS 15211 15369 . - 0 ID=cds-WP_000508175.1;Parent=gene-C9E95_RS22545;Dbxref=GenBank:WP_000508175.1;Name=WP_000508175.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461722.1;locus_tag=C9E95_RS22545;product=YqaE/Pmp3 family membrane protein;protein_id=WP_000508175.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 15552 15851 . + . ID=gene-C9E95_RS22550;Name=C9E95_RS22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22550;old_locus_tag=C9E95_23135 NZ_PYJW01000192.1 Protein Homology CDS 15552 15851 . + 0 ID=cds-WP_000137432.1;Parent=gene-C9E95_RS22550;Dbxref=GenBank:WP_000137432.1;Name=WP_000137432.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461723.1;locus_tag=C9E95_RS22550;product=ArsR/SmtB family transcription factor;protein_id=WP_000137432.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 15861 16388 . + . ID=gene-C9E95_RS22555;Name=C9E95_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22555;old_locus_tag=C9E95_23140 NZ_PYJW01000192.1 Protein Homology CDS 15861 16388 . + 0 ID=cds-WP_080204038.1;Parent=gene-C9E95_RS22555;Dbxref=GenBank:WP_080204038.1;Name=WP_080204038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461724.1;locus_tag=C9E95_RS22555;product=rhodanese family protein;protein_id=WP_080204038.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 16467 16646 . + . ID=gene-C9E95_RS22560;Name=C9E95_RS22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22560;old_locus_tag=C9E95_23145 NZ_PYJW01000192.1 Protein Homology CDS 16467 16646 . + 0 ID=cds-WP_023238336.1;Parent=gene-C9E95_RS22560;Dbxref=GenBank:WP_023238336.1;Name=WP_023238336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494935.1;locus_tag=C9E95_RS22560;product=hypothetical protein;protein_id=WP_023238336.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 16736 17137 . - . ID=gene-C9E95_RS22565;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=C9E95_RS22565;old_locus_tag=C9E95_23150 NZ_PYJW01000192.1 Protein Homology CDS 16736 17137 . - 0 ID=cds-WP_001051100.1;Parent=gene-C9E95_RS22565;Dbxref=GenBank:WP_001051100.1;Name=WP_001051100.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461725.1;locus_tag=C9E95_RS22565;product=DNA-binding protein StpA;protein_id=WP_001051100.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 18036 18485 . + . ID=gene-C9E95_RS22575;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=C9E95_RS22575;old_locus_tag=C9E95_23165 NZ_PYJW01000192.1 Protein Homology CDS 18036 18485 . + 0 ID=cds-WP_000492669.1;Parent=gene-C9E95_RS22575;Dbxref=GenBank:WP_000492669.1;Name=WP_000492669.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461726.1;locus_tag=C9E95_RS22575;product=L-alanine exporter AlaE;protein_id=WP_000492669.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 18520 18870 . - . ID=gene-C9E95_RS22580;Name=C9E95_RS22580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22580;old_locus_tag=C9E95_23170 NZ_PYJW01000192.1 Protein Homology CDS 18520 18870 . - 0 ID=cds-WP_000281304.1;Parent=gene-C9E95_RS22580;Dbxref=GenBank:WP_000281304.1;Name=WP_000281304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461727.1;locus_tag=C9E95_RS22580;product=DUF2002 family protein;protein_id=WP_000281304.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 19032 19358 . + . ID=gene-C9E95_RS22585;Name=C9E95_RS22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22585;old_locus_tag=C9E95_23175 NZ_PYJW01000192.1 Protein Homology CDS 19032 19358 . + 0 ID=cds-WP_080204037.1;Parent=gene-C9E95_RS22585;Dbxref=GenBank:WP_080204037.1;Name=WP_080204037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528627.1;locus_tag=C9E95_RS22585;product=DUF883 domain-containing protein;protein_id=WP_080204037.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 19442 20776 . - . ID=gene-C9E95_RS22590;Name=C9E95_RS22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22590;old_locus_tag=C9E95_23180 NZ_PYJW01000192.1 Protein Homology CDS 19442 20776 . - 0 ID=cds-WP_001138467.1;Parent=gene-C9E95_RS22590;Dbxref=GenBank:WP_001138467.1;Name=WP_001138467.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=C9E95_RS22590;product=PLP-dependent aminotransferase family protein;protein_id=WP_001138467.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 20865 21296 . + . ID=gene-C9E95_RS22595;Name=C9E95_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22595;old_locus_tag=C9E95_23185 NZ_PYJW01000192.1 Protein Homology CDS 20865 21296 . + 0 ID=cds-WP_000209807.1;Parent=gene-C9E95_RS22595;Dbxref=GenBank:WP_000209807.1;Name=WP_000209807.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461730.1;locus_tag=C9E95_RS22595;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000209807.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 21568 21813 . + . ID=gene-C9E95_RS22605;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=C9E95_RS22605;old_locus_tag=C9E95_23195 NZ_PYJW01000192.1 Protein Homology CDS 21568 21813 . + 0 ID=cds-WP_000028873.1;Parent=gene-C9E95_RS22605;Dbxref=GenBank:WP_000028873.1;Name=WP_000028873.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461731.1;locus_tag=C9E95_RS22605;product=glutaredoxin-like protein NrdH;protein_id=WP_000028873.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 21810 22220 . + . ID=gene-C9E95_RS22610;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=C9E95_RS22610;old_locus_tag=C9E95_23200 NZ_PYJW01000192.1 Protein Homology CDS 21810 22220 . + 0 ID=cds-WP_001275402.1;Parent=gene-C9E95_RS22610;Dbxref=GenBank:WP_001275402.1;Name=WP_001275402.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461732.1;locus_tag=C9E95_RS22610;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_001275402.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 22220 24337 . + . ID=gene-C9E95_RS22615;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=C9E95_RS22615;old_locus_tag=C9E95_23205 NZ_PYJW01000192.1 Protein Homology CDS 22220 24337 . + 0 ID=cds-WP_370818108.1;Parent=gene-C9E95_RS22615;Dbxref=GenBank:WP_370818108.1;Name=WP_370818108.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526351.1;locus_tag=C9E95_RS22615;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_370818108.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 24348 25307 . + . ID=gene-C9E95_RS22620;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=C9E95_RS22620;old_locus_tag=C9E95_23210 NZ_PYJW01000192.1 Protein Homology CDS 24348 25307 . + 0 ID=cds-WP_080204036.1;Parent=gene-C9E95_RS22620;Dbxref=GenBank:WP_080204036.1;Name=WP_080204036.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461734.1;locus_tag=C9E95_RS22620;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_080204036.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 25662 26864 . + . ID=gene-C9E95_RS22630;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=C9E95_RS22630;old_locus_tag=C9E95_23220 NZ_PYJW01000192.1 Protein Homology CDS 25662 26864 . + 0 ID=cds-WP_000985529.1;Parent=gene-C9E95_RS22630;Dbxref=GenBank:WP_000985529.1;Name=WP_000985529.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=C9E95_RS22630;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_000985529.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 26857 27921 . + . ID=gene-C9E95_RS22635;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=C9E95_RS22635;old_locus_tag=C9E95_23225 NZ_PYJW01000192.1 Protein Homology CDS 26857 27921 . + 0 ID=cds-WP_000775021.1;Parent=gene-C9E95_RS22635;Dbxref=GenBank:WP_000775021.1;Name=WP_000775021.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461736.1;locus_tag=C9E95_RS22635;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_000775021.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 27991 28986 . + . ID=gene-C9E95_RS22640;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=C9E95_RS22640;old_locus_tag=C9E95_23230 NZ_PYJW01000192.1 Protein Homology CDS 27991 28986 . + 0 ID=cds-WP_001216613.1;Parent=gene-C9E95_RS22640;Dbxref=GenBank:WP_001216613.1;Name=WP_001216613.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461737.1;locus_tag=C9E95_RS22640;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_001216613.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 29151 30335 . + . ID=gene-C9E95_RS22645;Name=C9E95_RS22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22645;old_locus_tag=C9E95_23235 NZ_PYJW01000192.1 Protein Homology CDS 29151 30335 . + 0 ID=cds-WP_000165769.1;Parent=gene-C9E95_RS22645;Dbxref=GenBank:WP_000165769.1;Name=WP_000165769.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461738.1;locus_tag=C9E95_RS22645;product=MFS transporter;protein_id=WP_000165769.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 30832 31362 . + . ID=gene-C9E95_RS22650;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=C9E95_RS22650;old_locus_tag=C9E95_23240 NZ_PYJW01000192.1 Protein Homology CDS 30832 31362 . + 0 ID=cds-WP_000378431.1;Parent=gene-C9E95_RS22650;Dbxref=GenBank:WP_000378431.1;Name=WP_000378431.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461739.1;locus_tag=C9E95_RS22650;product=transcriptional repressor MprA;protein_id=WP_000378431.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 31489 32661 . + . ID=gene-C9E95_RS22655;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=C9E95_RS22655;old_locus_tag=C9E95_23245 NZ_PYJW01000192.1 Protein Homology CDS 31489 32661 . + 0 ID=cds-WP_001275602.1;Parent=gene-C9E95_RS22655;Dbxref=GenBank:WP_001275602.1;Name=WP_001275602.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461740.1;locus_tag=C9E95_RS22655;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_001275602.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 32678 34216 . + . ID=gene-C9E95_RS22660;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=C9E95_RS22660;old_locus_tag=C9E95_23250 NZ_PYJW01000192.1 Protein Homology CDS 32678 34216 . + 0 ID=cds-WP_001187298.1;Parent=gene-C9E95_RS22660;Dbxref=GenBank:WP_001187298.1;Name=WP_001187298.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461741.1;locus_tag=C9E95_RS22660;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_001187298.1;transl_table=11 NZ_PYJW01000192.1 RefSeq gene 34265 35635 . - . ID=gene-C9E95_RS22665;Name=C9E95_RS22665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22665;old_locus_tag=C9E95_23255 NZ_PYJW01000192.1 Protein Homology CDS 34265 35635 . - 0 ID=cds-WP_023237386.1;Parent=gene-C9E95_RS22665;Dbxref=GenBank:WP_023237386.1;Name=WP_023237386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461742.1;locus_tag=C9E95_RS22665;product=carbohydrate porin;protein_id=WP_023237386.1;transl_table=11 ##sequence-region NZ_PYJW01000103.1 1 35754 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000103.1 RefSeq region 1 35754 . + . ID=NZ_PYJW01000103.1:1..35754;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000103.1 RefSeq gene 192 857 . - . ID=gene-C9E95_RS10955;Name=C9E95_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10955;old_locus_tag=C9E95_11235 NZ_PYJW01000103.1 Protein Homology CDS 192 857 . - 0 ID=cds-WP_001171581.1;Parent=gene-C9E95_RS10955;Dbxref=GenBank:WP_001171581.1;Name=WP_001171581.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462267.1;locus_tag=C9E95_RS10955;product=GntR family transcriptional regulator;protein_id=WP_001171581.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 844 1473 . - . ID=gene-C9E95_RS10960;Name=C9E95_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10960;old_locus_tag=C9E95_11240 NZ_PYJW01000103.1 Protein Homology CDS 844 1473 . - 0 ID=cds-WP_000723776.1;Parent=gene-C9E95_RS10960;Dbxref=GenBank:WP_000723776.1;Name=WP_000723776.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462268.1;locus_tag=C9E95_RS10960;product=GntR family transcriptional regulator;protein_id=WP_000723776.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 1593 2531 . - . ID=gene-C9E95_RS10965;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=C9E95_RS10965;old_locus_tag=C9E95_11245 NZ_PYJW01000103.1 Protein Homology CDS 1593 2531 . - 0 ID=cds-WP_000861586.1;Parent=gene-C9E95_RS10965;Dbxref=GenBank:WP_000861586.1;Name=WP_000861586.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=C9E95_RS10965;product=malate dehydrogenase;protein_id=WP_000861586.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 2946 3416 . + . ID=gene-C9E95_RS10970;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=C9E95_RS10970;old_locus_tag=C9E95_11250 NZ_PYJW01000103.1 Protein Homology CDS 2946 3416 . + 0 ID=cds-WP_001257852.1;Parent=gene-C9E95_RS10970;Dbxref=GenBank:WP_001257852.1;Name=WP_001257852.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=C9E95_RS10970;product=transcriptional regulator ArgR;protein_id=WP_001257852.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 3781 4044 . + . ID=gene-C9E95_RS10975;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=C9E95_RS10975;old_locus_tag=C9E95_11255 NZ_PYJW01000103.1 Protein Homology CDS 3781 4044 . + 0 ID=cds-WP_080204077.1;Parent=gene-C9E95_RS10975;Dbxref=GenBank:WP_080204077.1;Name=WP_080204077.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462271.1;locus_tag=C9E95_RS10975;product=peroxide/acid stress response protein YhcN;protein_id=WP_080204077.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 4148 4414 . + . ID=gene-C9E95_RS10980;Name=yhcN-B;gbkey=Gene;gene=yhcN-B;gene_biotype=protein_coding;locus_tag=C9E95_RS10980;old_locus_tag=C9E95_11260 NZ_PYJW01000103.1 Protein Homology CDS 4148 4414 . + 0 ID=cds-WP_000853277.1;Parent=gene-C9E95_RS10980;Dbxref=GenBank:WP_000853277.1;Name=WP_000853277.1;gbkey=CDS;gene=yhcN-B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462272.1;locus_tag=C9E95_RS10980;product=DUF1471 family stress response protein YhcN-B;protein_id=WP_000853277.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 4474 4746 . - . ID=gene-C9E95_RS10985;Name=C9E95_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10985;old_locus_tag=C9E95_11265 NZ_PYJW01000103.1 Protein Homology CDS 4474 4746 . - 0 ID=cds-WP_001103887.1;Parent=gene-C9E95_RS10985;Dbxref=GenBank:WP_001103887.1;Name=WP_001103887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462273.1;locus_tag=C9E95_RS10985;product=barstar family protein;protein_id=WP_001103887.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 4918 6885 . - . ID=gene-C9E95_RS10990;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=C9E95_RS10990;old_locus_tag=C9E95_11270 NZ_PYJW01000103.1 Protein Homology CDS 4918 6885 . - 0 ID=cds-WP_000510913.1;Parent=gene-C9E95_RS10990;Dbxref=GenBank:WP_000510913.1;Name=WP_000510913.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462274.1;locus_tag=C9E95_RS10990;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_000510913.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 6891 7823 . - . ID=gene-C9E95_RS10995;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=C9E95_RS10995;old_locus_tag=C9E95_11275 NZ_PYJW01000103.1 Protein Homology CDS 6891 7823 . - 0 ID=cds-WP_000855134.1;Parent=gene-C9E95_RS10995;Dbxref=GenBank:WP_000855134.1;Name=WP_000855134.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462275.1;locus_tag=C9E95_RS10995;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_000855134.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 7831 8034 . - . ID=gene-C9E95_RS11000;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=C9E95_RS11000;old_locus_tag=C9E95_11280 NZ_PYJW01000103.1 Protein Homology CDS 7831 8034 . - 0 ID=cds-WP_000051840.1;Parent=gene-C9E95_RS11000;Dbxref=GenBank:WP_000051840.1;Name=WP_000051840.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=C9E95_RS11000;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_000051840.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 8216 9145 . + . ID=gene-C9E95_RS11005;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=C9E95_RS11005;old_locus_tag=C9E95_11285 NZ_PYJW01000103.1 Protein Homology CDS 8216 9145 . + 0 ID=cds-WP_000440300.1;Parent=gene-C9E95_RS11005;Dbxref=GenBank:WP_000440300.1;Name=WP_000440300.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462277.1;locus_tag=C9E95_RS11005;product=HTH-type transcriptional activator AaeR;protein_id=WP_000440300.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 9267 10712 . - . ID=gene-C9E95_RS11010;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=C9E95_RS11010;old_locus_tag=C9E95_11290 NZ_PYJW01000103.1 Protein Homology CDS 9267 10712 . - 0 ID=cds-WP_000055940.1;Parent=gene-C9E95_RS11010;Dbxref=GenBank:WP_000055940.1;Name=WP_000055940.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=C9E95_RS11010;product=metalloprotease TldD;protein_id=WP_000055940.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 10857 14657 . - . ID=gene-C9E95_RS11015;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=C9E95_RS11015;old_locus_tag=C9E95_11295 NZ_PYJW01000103.1 Protein Homology CDS 10857 14657 . - 0 ID=cds-WP_001253503.1;Parent=gene-C9E95_RS11015;Dbxref=GenBank:WP_001253503.1;Name=WP_001253503.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462279.1;locus_tag=C9E95_RS11015;product=AsmA2 domain-containing protein YhdP;protein_id=WP_001253503.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 14768 16237 . - . ID=gene-C9E95_RS11020;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=C9E95_RS11020;old_locus_tag=C9E95_11300 NZ_PYJW01000103.1 Protein Homology CDS 14768 16237 . - 0 ID=cds-WP_080190158.1;Parent=gene-C9E95_RS11020;Dbxref=GenBank:WP_080190158.1;Name=WP_080190158.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=C9E95_RS11020;product=ribonuclease G;protein_id=WP_080190158.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 16227 16820 . - . ID=gene-C9E95_RS11025;Name=C9E95_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11025;old_locus_tag=C9E95_11305 NZ_PYJW01000103.1 Protein Homology CDS 16227 16820 . - 0 ID=cds-WP_000210306.1;Parent=gene-C9E95_RS11025;Dbxref=GenBank:WP_000210306.1;Name=WP_000210306.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462281.1;locus_tag=C9E95_RS11025;product=Maf family protein;protein_id=WP_000210306.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 16829 17317 . - . ID=gene-C9E95_RS11030;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=C9E95_RS11030;old_locus_tag=C9E95_11310 NZ_PYJW01000103.1 Protein Homology CDS 16829 17317 . - 0 ID=cds-WP_000179403.1;Parent=gene-C9E95_RS11030;Dbxref=GenBank:WP_000179403.1;Name=WP_000179403.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=C9E95_RS11030;product=rod shape-determining protein MreD;protein_id=WP_000179403.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 17320 18372 . - . ID=gene-C9E95_RS11035;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=C9E95_RS11035;old_locus_tag=C9E95_11315 NZ_PYJW01000103.1 Protein Homology CDS 17320 18372 . - 0 ID=cds-WP_000802538.1;Parent=gene-C9E95_RS11035;Dbxref=GenBank:WP_000802538.1;Name=WP_000802538.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462283.1;locus_tag=C9E95_RS11035;product=rod shape-determining protein MreC;protein_id=WP_000802538.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 18437 19480 . - . ID=gene-C9E95_RS11040;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=C9E95_RS11040;old_locus_tag=C9E95_11320 NZ_PYJW01000103.1 Protein Homology CDS 18437 19480 . - 0 ID=cds-WP_000913396.1;Parent=gene-C9E95_RS11040;Dbxref=GenBank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=C9E95_RS11040;product=rod shape-determining protein MreB;protein_id=WP_000913396.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 19788 21728 . - . ID=gene-C9E95_RS11050;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=C9E95_RS11050;old_locus_tag=C9E95_11335 NZ_PYJW01000103.1 Protein Homology CDS 19788 21728 . - 0 ID=cds-WP_001620457.1;Parent=gene-C9E95_RS11050;Dbxref=GenBank:WP_001620457.1;Name=WP_001620457.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462285.1;locus_tag=C9E95_RS11050;product=RNase E specificity factor CsrD;protein_id=WP_001620457.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 21932 22906 . + . ID=gene-C9E95_RS11055;Name=C9E95_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11055;old_locus_tag=C9E95_11340 NZ_PYJW01000103.1 Protein Homology CDS 21932 22906 . + 0 ID=cds-WP_001148246.1;Parent=gene-C9E95_RS11055;Dbxref=GenBank:WP_001148246.1;Name=WP_001148246.1;Ontology_term=GO:0004022,GO:0008270,GO:0030554;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462286.1;locus_tag=C9E95_RS11055;product=MDR family oxidoreductase;protein_id=WP_001148246.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 23019 24023 . + . ID=gene-C9E95_RS11060;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=C9E95_RS11060;old_locus_tag=C9E95_11345 NZ_PYJW01000103.1 Protein Homology CDS 23019 24023 . + 0 ID=cds-WP_000723850.1;Parent=gene-C9E95_RS11060;Dbxref=GenBank:WP_000723850.1;Name=WP_000723850.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462287.1;locus_tag=C9E95_RS11060;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_000723850.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 24024 24623 . + . ID=gene-C9E95_RS11065;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=C9E95_RS11065;old_locus_tag=C9E95_11350 NZ_PYJW01000103.1 Protein Homology CDS 24024 24623 . + 0 ID=cds-WP_001241496.1;Parent=gene-C9E95_RS11065;Dbxref=GenBank:WP_001241496.1;Name=WP_001241496.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462288.1;locus_tag=C9E95_RS11065;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_001241496.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 25016 25486 . + . ID=gene-C9E95_RS11070;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=C9E95_RS11070;old_locus_tag=C9E95_11355 NZ_PYJW01000103.1 Protein Homology CDS 25016 25486 . + 0 ID=cds-WP_000354626.1;Parent=gene-C9E95_RS11070;Dbxref=GenBank:WP_000354626.1;Name=WP_000354626.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462289.1;locus_tag=C9E95_RS11070;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354626.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 25497 26846 . + . ID=gene-C9E95_RS11075;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=C9E95_RS11075;old_locus_tag=C9E95_11360 NZ_PYJW01000103.1 Protein Homology CDS 25497 26846 . + 0 ID=cds-WP_000884627.1;Parent=gene-C9E95_RS11075;Dbxref=GenBank:WP_000884627.1;Name=WP_000884627.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=C9E95_RS11075;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_000884627.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 26955 27197 . + . ID=gene-C9E95_RS11080;Name=C9E95_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11080;old_locus_tag=C9E95_11365 NZ_PYJW01000103.1 Protein Homology CDS 26955 27197 . + 0 ID=cds-WP_000340018.1;Parent=gene-C9E95_RS11080;Dbxref=GenBank:WP_000340018.1;Name=WP_000340018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462291.1;locus_tag=C9E95_RS11080;product=YhdT family protein;protein_id=WP_000340018.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 27187 28638 . + . ID=gene-C9E95_RS11085;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=C9E95_RS11085;old_locus_tag=C9E95_11370 NZ_PYJW01000103.1 Protein Homology CDS 27187 28638 . + 0 ID=cds-WP_023993976.1;Parent=gene-C9E95_RS11085;Dbxref=GenBank:WP_023993976.1;Name=WP_023993976.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462292.1;locus_tag=C9E95_RS11085;product=sodium/pantothenate symporter;protein_id=WP_023993976.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 28650 29531 . + . ID=gene-C9E95_RS11090;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=C9E95_RS11090;old_locus_tag=C9E95_11375 NZ_PYJW01000103.1 Protein Homology CDS 28650 29531 . + 0 ID=cds-WP_001145849.1;Parent=gene-C9E95_RS11090;Dbxref=GenBank:WP_001145849.1;Name=WP_001145849.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462293.1;locus_tag=C9E95_RS11090;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_001145849.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 30192 31157 . + . ID=gene-C9E95_RS11095;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=C9E95_RS11095;old_locus_tag=C9E95_11380 NZ_PYJW01000103.1 Protein Homology CDS 30192 31157 . + 0 ID=cds-WP_001219664.1;Parent=gene-C9E95_RS11095;Dbxref=GenBank:WP_001219664.1;Name=WP_001219664.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=C9E95_RS11095;product=tRNA dihydrouridine synthase DusB;protein_id=WP_001219664.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 31183 31479 . + . ID=gene-C9E95_RS11100;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=C9E95_RS11100;old_locus_tag=C9E95_11385 NZ_PYJW01000103.1 Protein Homology CDS 31183 31479 . + 0 ID=cds-WP_000462905.1;Parent=gene-C9E95_RS11100;Dbxref=GenBank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=C9E95_RS11100;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 31565 32449 . + . ID=gene-C9E95_RS11105;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=C9E95_RS11105;old_locus_tag=C9E95_11390 NZ_PYJW01000103.1 Protein Homology CDS 31565 32449 . + 0 ID=cds-WP_000642611.1;Parent=gene-C9E95_RS11105;Dbxref=GenBank:WP_000642611.1;Name=WP_000642611.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462296.1;locus_tag=C9E95_RS11105;product=adenine-specific DNA-methyltransferase;protein_id=WP_000642611.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 32532 32696 . + . ID=gene-C9E95_RS11110;Name=C9E95_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11110;old_locus_tag=C9E95_11395 NZ_PYJW01000103.1 Protein Homology CDS 32532 32696 . + 0 ID=cds-WP_000620015.1;Parent=gene-C9E95_RS11110;Dbxref=GenBank:WP_000620015.1;Name=WP_000620015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462297.1;locus_tag=C9E95_RS11110;product=DUF2556 family protein;protein_id=WP_000620015.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 32847 34946 . + . ID=gene-C9E95_RS11115;Name=C9E95_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11115;old_locus_tag=C9E95_11400 NZ_PYJW01000103.1 Protein Homology CDS 32847 34946 . + 0 ID=cds-WP_023993975.1;Parent=gene-C9E95_RS11115;Dbxref=GenBank:WP_023993975.1;Name=WP_023993975.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462298.1;locus_tag=C9E95_RS11115;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_023993975.1;transl_table=11 NZ_PYJW01000103.1 RefSeq gene 34949 35611 . - . ID=gene-C9E95_RS11120;Name=envR;gbkey=Gene;gene=envR;gene_biotype=protein_coding;locus_tag=C9E95_RS11120;old_locus_tag=C9E95_11405 NZ_PYJW01000103.1 Protein Homology CDS 34949 35611 . - 0 ID=cds-WP_001085725.1;Parent=gene-C9E95_RS11120;Dbxref=GenBank:WP_001085725.1;Name=WP_001085725.1;gbkey=CDS;gene=envR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462299.1;locus_tag=C9E95_RS11120;product=acrEF/envCD operon transcriptional regulator;protein_id=WP_001085725.1;transl_table=11 ##sequence-region NZ_PYJW01000036.1 1 35016 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000036.1 RefSeq region 1 35016 . + . ID=NZ_PYJW01000036.1:1..35016;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000036.1 RefSeq gene 1 1265 . - . ID=gene-C9E95_RS02565;Name=C9E95_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02565;old_locus_tag=C9E95_02610;partial=true;start_range=.,1 NZ_PYJW01000036.1 Protein Homology CDS 1 1265 . - 0 ID=cds-WP_348631210.1;Parent=gene-C9E95_RS02565;Dbxref=GenBank:WP_348631210.1;Name=WP_348631210.1;Ontology_term=GO:0090304,GO:0051908;gbkey=CDS;go_function=double-stranded DNA 5'-3' DNA exonuclease activity|0051908||IEA;go_process=nucleic acid metabolic process|0090304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023732.1;locus_tag=C9E95_RS02565;partial=true;product=RecE family exodeoxyribonuclease;protein_id=WP_348631210.1;start_range=.,1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 1406 1741 . - . ID=gene-C9E95_RS02570;Name=C9E95_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02570;old_locus_tag=C9E95_02615 NZ_PYJW01000036.1 Protein Homology CDS 1406 1741 . - 0 ID=cds-WP_000799629.1;Parent=gene-C9E95_RS02570;Dbxref=GenBank:WP_000799629.1;Name=WP_000799629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000799630.1;locus_tag=C9E95_RS02570;product=hypothetical protein;protein_id=WP_000799629.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 1816 2100 . - . ID=gene-C9E95_RS02575;Name=C9E95_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02575;old_locus_tag=C9E95_02620 NZ_PYJW01000036.1 Protein Homology CDS 1816 2100 . - 0 ID=cds-WP_135369802.1;Parent=gene-C9E95_RS02575;Dbxref=GenBank:WP_135369802.1;Name=WP_135369802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000613376.1;locus_tag=C9E95_RS02575;product=YdaE family protein;protein_id=WP_135369802.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 2520 2744 . - . ID=gene-C9E95_RS02580;Name=C9E95_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02580;old_locus_tag=C9E95_02625 NZ_PYJW01000036.1 Protein Homology CDS 2520 2744 . - 0 ID=cds-WP_000402504.1;Parent=gene-C9E95_RS02580;Dbxref=GenBank:WP_000402504.1;Name=WP_000402504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000402504.1;locus_tag=C9E95_RS02580;product=hypothetical protein;protein_id=WP_000402504.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 2743 2919 . + . ID=gene-C9E95_RS23140;Name=C9E95_RS23140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23140 NZ_PYJW01000036.1 GeneMarkS-2+ CDS 2743 2919 . + 0 ID=cds-WP_165451218.1;Parent=gene-C9E95_RS23140;Dbxref=GenBank:WP_165451218.1;Name=WP_165451218.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS23140;product=hypothetical protein;protein_id=WP_165451218.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 3058 3483 . - . ID=gene-C9E95_RS02585;Name=C9E95_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02585;old_locus_tag=C9E95_02630 NZ_PYJW01000036.1 Protein Homology CDS 3058 3483 . - 0 ID=cds-WP_001224472.1;Parent=gene-C9E95_RS02585;Dbxref=GenBank:WP_001224472.1;Name=WP_001224472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001224472.1;locus_tag=C9E95_RS02585;product=helix-turn-helix domain-containing protein;protein_id=WP_001224472.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 3580 3834 . + . ID=gene-C9E95_RS02590;Name=C9E95_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02590;old_locus_tag=C9E95_02635 NZ_PYJW01000036.1 Protein Homology CDS 3580 3834 . + 0 ID=cds-WP_001033911.1;Parent=gene-C9E95_RS02590;Dbxref=GenBank:WP_001033911.1;Name=WP_001033911.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF013540.6;locus_tag=C9E95_RS02590;product=helix-turn-helix domain-containing protein;protein_id=WP_001033911.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 3821 4315 . + . ID=gene-C9E95_RS02595;Name=C9E95_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02595;old_locus_tag=C9E95_02640 NZ_PYJW01000036.1 Protein Homology CDS 3821 4315 . + 0 ID=cds-WP_001534383.1;Parent=gene-C9E95_RS02595;Dbxref=GenBank:WP_001534383.1;Name=WP_001534383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533160.1;locus_tag=C9E95_RS02595;product=hypothetical protein;protein_id=WP_001534383.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 4359 5366 . + . ID=gene-C9E95_RS02600;Name=C9E95_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02600;old_locus_tag=C9E95_02645 NZ_PYJW01000036.1 Protein Homology CDS 4359 5366 . + 0 ID=cds-WP_135369803.1;Parent=gene-C9E95_RS02600;Dbxref=GenBank:WP_135369803.1;Name=WP_135369803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729543.1;locus_tag=C9E95_RS02600;product=DUF1376 domain-containing protein;protein_id=WP_135369803.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 5278 5820 . + . ID=gene-C9E95_RS02605;Name=C9E95_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02605;old_locus_tag=C9E95_02650 NZ_PYJW01000036.1 Protein Homology CDS 5278 5820 . + 0 ID=cds-WP_157872077.1;Parent=gene-C9E95_RS02605;Dbxref=GenBank:WP_157872077.1;Name=WP_157872077.1;Ontology_term=GO:0006270;gbkey=CDS;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001307798.1;locus_tag=C9E95_RS02605;product=replication protein P;protein_id=WP_157872077.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 5834 6229 . + . ID=gene-C9E95_RS02610;Name=C9E95_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02610;old_locus_tag=C9E95_02655 NZ_PYJW01000036.1 Protein Homology CDS 5834 6229 . + 0 ID=cds-WP_079981261.1;Parent=gene-C9E95_RS02610;Dbxref=GenBank:WP_079981261.1;Name=WP_079981261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089414.1;locus_tag=C9E95_RS02610;product=DUF977 family protein;protein_id=WP_079981261.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 6226 6498 . + . ID=gene-C9E95_RS02615;Name=C9E95_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02615;old_locus_tag=C9E95_02660 NZ_PYJW01000036.1 Protein Homology CDS 6226 6498 . + 0 ID=cds-WP_079981260.1;Parent=gene-C9E95_RS02615;Dbxref=GenBank:WP_079981260.1;Name=WP_079981260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000687974.1;locus_tag=C9E95_RS02615;product=hypothetical protein;protein_id=WP_079981260.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 6702 6857 . + . ID=gene-C9E95_RS02620;Name=C9E95_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02620;old_locus_tag=C9E95_02665 NZ_PYJW01000036.1 Protein Homology CDS 6702 6857 . + 0 ID=cds-WP_001597144.1;Parent=gene-C9E95_RS02620;Dbxref=GenBank:WP_001597144.1;Name=WP_001597144.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416080.1;locus_tag=C9E95_RS02620;product=Hok/Gef family protein;protein_id=WP_001597144.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 7107 7355 . + . ID=gene-C9E95_RS02625;Name=C9E95_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02625;old_locus_tag=C9E95_02675 NZ_PYJW01000036.1 Protein Homology CDS 7107 7355 . + 0 ID=cds-WP_000911592.1;Parent=gene-C9E95_RS02625;Dbxref=GenBank:WP_000911592.1;Name=WP_000911592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000911590.1;locus_tag=C9E95_RS02625;product=hypothetical protein;protein_id=WP_000911592.1;transl_table=11 NZ_PYJW01000036.1 RefSeq pseudogene 7419 7499 . + . ID=gene-C9E95_RS23370;Name=C9E95_RS23370;end_range=7499,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23370;partial=true;pseudo=true NZ_PYJW01000036.1 Protein Homology CDS 7419 7499 . + 0 ID=cds-C9E95_RS23370;Parent=gene-C9E95_RS23370;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=7499,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309983.1;locus_tag=C9E95_RS23370;partial=true;product=DUF1367 family protein;pseudo=true;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 7529 7966 . + . ID=gene-C9E95_RS02630;Name=C9E95_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02630;old_locus_tag=C9E95_02680 NZ_PYJW01000036.1 Protein Homology CDS 7529 7966 . + 0 ID=cds-WP_000023105.1;Parent=gene-C9E95_RS02630;Dbxref=GenBank:WP_000023105.1;Name=WP_000023105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023105.1;locus_tag=C9E95_RS02630;product=recombination protein NinB;protein_id=WP_000023105.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 7963 8157 . + . ID=gene-C9E95_RS23375;Name=C9E95_RS23375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23375;old_locus_tag=C9E95_02685 NZ_PYJW01000036.1 Protein Homology CDS 7963 8157 . + 0 ID=cds-WP_024136025.1;Parent=gene-C9E95_RS23375;Dbxref=GenBank:WP_024136025.1;Name=WP_024136025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000784711.1;locus_tag=C9E95_RS23375;product=hypothetical protein;protein_id=WP_024136025.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 8154 8435 . + . ID=gene-C9E95_RS02640;Name=C9E95_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02640;old_locus_tag=C9E95_02690 NZ_PYJW01000036.1 Protein Homology CDS 8154 8435 . + 0 ID=cds-WP_050942040.1;Parent=gene-C9E95_RS02640;Dbxref=GenBank:WP_050942040.1;Name=WP_050942040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861018.1;locus_tag=C9E95_RS02640;product=DUF1364 family protein;protein_id=WP_050942040.1;transl_table=11 NZ_PYJW01000036.1 RefSeq pseudogene 8432 8792 . + . ID=gene-C9E95_RS23380;Name=C9E95_RS23380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23380;old_locus_tag=C9E95_02695;pseudo=true NZ_PYJW01000036.1 Protein Homology CDS 8432 8792 . + 0 ID=cds-C9E95_RS23380;Parent=gene-C9E95_RS23380;Note=frameshifted%3B internal stop;Ontology_term=GO:0006281,GO:0006310,GO:0000287,GO:0000400,GO:0008821;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,four-way junction DNA binding|0000400||IEA,crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752686.1;locus_tag=C9E95_RS23380;product=RusA family crossover junction endodeoxyribonuclease;pseudo=true;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 8785 9138 . + . ID=gene-C9E95_RS02650;Name=C9E95_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02650;old_locus_tag=C9E95_02700 NZ_PYJW01000036.1 Protein Homology CDS 8785 9138 . + 0 ID=cds-WP_065618882.1;Parent=gene-C9E95_RS02650;Dbxref=GenBank:WP_065618882.1;Name=WP_065618882.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001205454.1;locus_tag=C9E95_RS02650;product=antiterminator Q family protein;protein_id=WP_065618882.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 9147 10187 . - . ID=gene-C9E95_RS02655;Name=C9E95_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02655;old_locus_tag=C9E95_02705 NZ_PYJW01000036.1 Protein Homology CDS 9147 10187 . - 0 ID=cds-WP_080187836.1;Parent=gene-C9E95_RS02655;Dbxref=GenBank:WP_080187836.1;Name=WP_080187836.1;Ontology_term=GO:0006304,GO:0003677,GO:0003886,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA (cytosine-5-)-methyltransferase activity|0003886||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000599523.1;locus_tag=C9E95_RS02655;product=DNA cytosine methyltransferase;protein_id=WP_080187836.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 10200 11981 . - . ID=gene-C9E95_RS02660;Name=C9E95_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02660;old_locus_tag=C9E95_02710 NZ_PYJW01000036.1 Protein Homology CDS 10200 11981 . - 0 ID=cds-WP_088389688.1;Parent=gene-C9E95_RS02660;Dbxref=GenBank:WP_088389688.1;Name=WP_088389688.1;Ontology_term=GO:0004519,GO:0004527,GO:0005524,GO:0016887,GO:0046872;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,exonuclease activity|0004527||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004847774.1;locus_tag=C9E95_RS02660;product=ATP-dependent nuclease;protein_id=WP_088389688.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 12440 12646 . + . ID=gene-C9E95_RS02665;Name=C9E95_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02665;old_locus_tag=C9E95_02715 NZ_PYJW01000036.1 Protein Homology CDS 12440 12646 . + 0 ID=cds-WP_058679888.1;Parent=gene-C9E95_RS02665;Dbxref=GenBank:WP_058679888.1;Name=WP_058679888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001076799.1;locus_tag=C9E95_RS02665;product=hypothetical protein;protein_id=WP_058679888.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 12637 13182 . - . ID=gene-C9E95_RS02670;Name=C9E95_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02670 NZ_PYJW01000036.1 GeneMarkS-2+ CDS 12637 13182 . - 0 ID=cds-WP_130045103.1;Parent=gene-C9E95_RS02670;Dbxref=GenBank:WP_130045103.1;Name=WP_130045103.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS02670;product=DUF2441 domain-containing protein;protein_id=WP_130045103.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 13374 13676 . + . ID=gene-C9E95_RS02675;Name=C9E95_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02675;old_locus_tag=C9E95_02720 NZ_PYJW01000036.1 Protein Homology CDS 13374 13676 . + 0 ID=cds-WP_001525456.1;Parent=gene-C9E95_RS02675;Dbxref=GenBank:WP_001525456.1;Name=WP_001525456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001674576.1;locus_tag=C9E95_RS02675;product=HP1 family phage holin;protein_id=WP_001525456.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 13654 14193 . + . ID=gene-C9E95_RS02680;Name=C9E95_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02680;old_locus_tag=C9E95_02725 NZ_PYJW01000036.1 Protein Homology CDS 13654 14193 . + 0 ID=cds-WP_001534313.1;Parent=gene-C9E95_RS02680;Dbxref=GenBank:WP_001534313.1;Name=WP_001534313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525444.1;locus_tag=C9E95_RS02680;product=lysozyme;protein_id=WP_001534313.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 14294 14764 . + . ID=gene-C9E95_RS02685;Name=C9E95_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02685;old_locus_tag=C9E95_02730 NZ_PYJW01000036.1 Protein Homology CDS 14294 14764 . + 0 ID=cds-WP_088389689.1;Parent=gene-C9E95_RS02685;Dbxref=GenBank:WP_088389689.1;Name=WP_088389689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012601422.1;locus_tag=C9E95_RS02685;product=lysis protein;protein_id=WP_088389689.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 14964 15227 . + . ID=gene-C9E95_RS02690;Name=C9E95_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02690;old_locus_tag=C9E95_02735 NZ_PYJW01000036.1 GeneMarkS-2+ CDS 14964 15227 . + 0 ID=cds-WP_080176836.1;Parent=gene-C9E95_RS02690;Dbxref=GenBank:WP_080176836.1;Name=WP_080176836.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS02690;product=hypothetical protein;protein_id=WP_080176836.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 15297 15926 . + . ID=gene-C9E95_RS02695;Name=C9E95_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02695;old_locus_tag=C9E95_02740 NZ_PYJW01000036.1 Protein Homology CDS 15297 15926 . + 0 ID=cds-WP_080187690.1;Parent=gene-C9E95_RS02695;Dbxref=GenBank:WP_080187690.1;Name=WP_080187690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118130.1;locus_tag=C9E95_RS02695;product=hypothetical protein;protein_id=WP_080187690.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 15929 17548 . + . ID=gene-C9E95_RS02700;Name=C9E95_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02700;old_locus_tag=C9E95_02745 NZ_PYJW01000036.1 Protein Homology CDS 15929 17548 . + 0 ID=cds-WP_079898419.1;Parent=gene-C9E95_RS02700;Dbxref=GenBank:WP_079898419.1;Name=WP_079898419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001130781.1;locus_tag=C9E95_RS02700;product=TerL protein;protein_id=WP_079898419.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 17548 19068 . + . ID=gene-C9E95_RS02705;Name=C9E95_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02705;old_locus_tag=C9E95_02750 NZ_PYJW01000036.1 Protein Homology CDS 17548 19068 . + 0 ID=cds-WP_135369804.1;Parent=gene-C9E95_RS02705;Dbxref=GenBank:WP_135369804.1;Name=WP_135369804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534366.1;locus_tag=C9E95_RS02705;product=DUF1073 domain-containing protein;protein_id=WP_135369804.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 19109 19798 . + . ID=gene-C9E95_RS02710;Name=C9E95_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02710;old_locus_tag=C9E95_02755 NZ_PYJW01000036.1 Protein Homology CDS 19109 19798 . + 0 ID=cds-WP_057519928.1;Parent=gene-C9E95_RS02710;Dbxref=GenBank:WP_057519928.1;Name=WP_057519928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000552018.1;locus_tag=C9E95_RS02710;product=phage head morphogenesis protein;protein_id=WP_057519928.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 19795 21141 . + . ID=gene-C9E95_RS02715;Name=C9E95_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02715;old_locus_tag=C9E95_02760 NZ_PYJW01000036.1 Protein Homology CDS 19795 21141 . + 0 ID=cds-WP_023220053.1;Parent=gene-C9E95_RS02715;Dbxref=GenBank:WP_023220053.1;Name=WP_023220053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748494.1;locus_tag=C9E95_RS02715;product=DUF2213 domain-containing protein;protein_id=WP_023220053.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 21143 21625 . + . ID=gene-C9E95_RS02720;Name=C9E95_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02720;old_locus_tag=C9E95_02765 NZ_PYJW01000036.1 Protein Homology CDS 21143 21625 . + 0 ID=cds-WP_001525451.1;Parent=gene-C9E95_RS02720;Dbxref=GenBank:WP_001525451.1;Name=WP_001525451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001091400.1;locus_tag=C9E95_RS02720;product=structural cement protein Gp24;protein_id=WP_001525451.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 21625 22653 . + . ID=gene-C9E95_RS02725;Name=C9E95_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02725;old_locus_tag=C9E95_02770 NZ_PYJW01000036.1 Protein Homology CDS 21625 22653 . + 0 ID=cds-WP_001031913.1;Parent=gene-C9E95_RS02725;Dbxref=GenBank:WP_001031913.1;Name=WP_001031913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001031907.1;locus_tag=C9E95_RS02725;product=hypothetical protein;protein_id=WP_001031913.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 22657 23004 . + . ID=gene-C9E95_RS02730;Name=C9E95_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02730;old_locus_tag=C9E95_02775 NZ_PYJW01000036.1 Protein Homology CDS 22657 23004 . + 0 ID=cds-WP_001748493.1;Parent=gene-C9E95_RS02730;Dbxref=GenBank:WP_001748493.1;Name=WP_001748493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829561.1;locus_tag=C9E95_RS02730;product=hypothetical protein;protein_id=WP_001748493.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 23011 23466 . + . ID=gene-C9E95_RS02735;Name=C9E95_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02735;old_locus_tag=C9E95_02780 NZ_PYJW01000036.1 Protein Homology CDS 23011 23466 . + 0 ID=cds-WP_001748492.1;Parent=gene-C9E95_RS02735;Dbxref=GenBank:WP_001748492.1;Name=WP_001748492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000537613.1;locus_tag=C9E95_RS02735;product=DUF4054 domain-containing protein;protein_id=WP_001748492.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 23460 24044 . + . ID=gene-C9E95_RS02740;Name=C9E95_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02740;old_locus_tag=C9E95_02785 NZ_PYJW01000036.1 Protein Homology CDS 23460 24044 . + 0 ID=cds-WP_022742718.1;Parent=gene-C9E95_RS02740;Dbxref=GenBank:WP_022742718.1;Name=WP_022742718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000247610.1;locus_tag=C9E95_RS02740;product=hypothetical protein;protein_id=WP_022742718.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 24041 24406 . + . ID=gene-C9E95_RS02745;Name=C9E95_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02745;old_locus_tag=C9E95_02790 NZ_PYJW01000036.1 Protein Homology CDS 24041 24406 . + 0 ID=cds-WP_001748490.1;Parent=gene-C9E95_RS02745;Dbxref=GenBank:WP_001748490.1;Name=WP_001748490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748490.1;locus_tag=C9E95_RS02745;product=hypothetical protein;protein_id=WP_001748490.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 24391 24936 . + . ID=gene-C9E95_RS02750;Name=C9E95_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02750;old_locus_tag=C9E95_02795 NZ_PYJW01000036.1 Protein Homology CDS 24391 24936 . + 0 ID=cds-WP_135369805.1;Parent=gene-C9E95_RS02750;Dbxref=GenBank:WP_135369805.1;Name=WP_135369805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525438.1;locus_tag=C9E95_RS02750;product=phage neck terminator protein;protein_id=WP_135369805.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 24917 26401 . + . ID=gene-C9E95_RS02755;Name=C9E95_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02755;old_locus_tag=C9E95_02800 NZ_PYJW01000036.1 Protein Homology CDS 24917 26401 . + 0 ID=cds-WP_053445470.1;Parent=gene-C9E95_RS02755;Dbxref=GenBank:WP_053445470.1;Name=WP_053445470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748488.1;locus_tag=C9E95_RS02755;product=DUF3383 domain-containing protein;protein_id=WP_053445470.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 26402 26848 . + . ID=gene-C9E95_RS02760;Name=C9E95_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02760;old_locus_tag=C9E95_02805 NZ_PYJW01000036.1 Protein Homology CDS 26402 26848 . + 0 ID=cds-WP_000016414.1;Parent=gene-C9E95_RS02760;Dbxref=GenBank:WP_000016414.1;Name=WP_000016414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000016417.1;locus_tag=C9E95_RS02760;product=phage tail fiber protein;protein_id=WP_000016414.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 26848 27252 . + . ID=gene-C9E95_RS02765;Name=C9E95_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02765;old_locus_tag=C9E95_02810 NZ_PYJW01000036.1 Protein Homology CDS 26848 27252 . + 0 ID=cds-WP_023234167.1;Parent=gene-C9E95_RS02765;Dbxref=GenBank:WP_023234167.1;Name=WP_023234167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101348.1;locus_tag=C9E95_RS02765;product=hypothetical protein;protein_id=WP_023234167.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 27294 27476 . + . ID=gene-C9E95_RS02770;Name=C9E95_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02770;old_locus_tag=C9E95_02815 NZ_PYJW01000036.1 Protein Homology CDS 27294 27476 . + 0 ID=cds-WP_000228831.1;Parent=gene-C9E95_RS02770;Dbxref=GenBank:WP_000228831.1;Name=WP_000228831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228830.1;locus_tag=C9E95_RS02770;product=hypothetical protein;protein_id=WP_000228831.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 27460 29631 . + . ID=gene-C9E95_RS02775;Name=C9E95_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02775;old_locus_tag=C9E95_02820 NZ_PYJW01000036.1 Protein Homology CDS 27460 29631 . + 0 ID=cds-WP_135369806.1;Parent=gene-C9E95_RS02775;Dbxref=GenBank:WP_135369806.1;Name=WP_135369806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000741777.1;locus_tag=C9E95_RS02775;product=transglycosylase SLT domain-containing protein;protein_id=WP_135369806.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 29628 30338 . + . ID=gene-C9E95_RS02780;Name=C9E95_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02780;old_locus_tag=C9E95_02825 NZ_PYJW01000036.1 Protein Homology CDS 29628 30338 . + 0 ID=cds-WP_001525483.1;Parent=gene-C9E95_RS02780;Dbxref=GenBank:WP_001525483.1;Name=WP_001525483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000010340.1;locus_tag=C9E95_RS02780;product=phage baseplate protein;protein_id=WP_001525483.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 30338 30640 . + . ID=gene-C9E95_RS02785;Name=C9E95_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02785;old_locus_tag=C9E95_02830 NZ_PYJW01000036.1 Protein Homology CDS 30338 30640 . + 0 ID=cds-WP_001748486.1;Parent=gene-C9E95_RS02785;Dbxref=GenBank:WP_001748486.1;Name=WP_001748486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534376.1;locus_tag=C9E95_RS02785;product=phage baseplate plug family protein;protein_id=WP_001748486.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 30637 31506 . + . ID=gene-C9E95_RS02790;Name=C9E95_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02790;old_locus_tag=C9E95_02835 NZ_PYJW01000036.1 Protein Homology CDS 30637 31506 . + 0 ID=cds-WP_135369807.1;Parent=gene-C9E95_RS02790;Dbxref=GenBank:WP_135369807.1;Name=WP_135369807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000122181.1;locus_tag=C9E95_RS02790;product=baseplate hub protein;protein_id=WP_135369807.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 31487 32164 . + . ID=gene-C9E95_RS02795;Name=C9E95_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02795;old_locus_tag=C9E95_02840 NZ_PYJW01000036.1 Protein Homology CDS 31487 32164 . + 0 ID=cds-WP_135369808.1;Parent=gene-C9E95_RS02795;Dbxref=GenBank:WP_135369808.1;Name=WP_135369808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534334.1;locus_tag=C9E95_RS02795;product=Gp138 family membrane-puncturing spike protein;protein_id=WP_135369808.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 32177 32533 . + . ID=gene-C9E95_RS02800;Name=C9E95_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02800;old_locus_tag=C9E95_02845 NZ_PYJW01000036.1 Protein Homology CDS 32177 32533 . + 0 ID=cds-WP_001748483.1;Parent=gene-C9E95_RS02800;Dbxref=GenBank:WP_001748483.1;Name=WP_001748483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001191864.1;locus_tag=C9E95_RS02800;product=hypothetical protein;protein_id=WP_001748483.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 32530 33771 . + . ID=gene-C9E95_RS02805;Name=C9E95_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02805;old_locus_tag=C9E95_02850 NZ_PYJW01000036.1 Protein Homology CDS 32530 33771 . + 0 ID=cds-WP_135369809.1;Parent=gene-C9E95_RS02805;Dbxref=GenBank:WP_135369809.1;Name=WP_135369809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748481.1;locus_tag=C9E95_RS02805;product=baseplate J/gp47 family protein;protein_id=WP_135369809.1;transl_table=11 NZ_PYJW01000036.1 RefSeq gene 33773 34375 . + . ID=gene-C9E95_RS02810;Name=C9E95_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02810;old_locus_tag=C9E95_02855 NZ_PYJW01000036.1 Protein Homology CDS 33773 34375 . + 0 ID=cds-WP_001181747.1;Parent=gene-C9E95_RS02810;Dbxref=GenBank:WP_001181747.1;Name=WP_001181747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001181748.1;locus_tag=C9E95_RS02810;product=DUF2612 domain-containing protein;protein_id=WP_001181747.1;transl_table=11 NZ_PYJW01000036.1 RefSeq pseudogene 34884 35016 . + . ID=gene-C9E95_RS23385;Name=C9E95_RS23385;end_range=35016,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23385;partial=true;pseudo=true;start_range=.,34884 NZ_PYJW01000036.1 Protein Homology CDS 34884 35016 . + 0 ID=cds-C9E95_RS23385;Parent=gene-C9E95_RS23385;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=35016,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460024.1;locus_tag=C9E95_RS23385;partial=true;product=phage tail protein;pseudo=true;start_range=.,34884;transl_table=11 ##sequence-region NZ_PYJW01000163.1 1 113817 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000163.1 RefSeq region 1 113817 . + . ID=NZ_PYJW01000163.1:1..113817;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000163.1 RefSeq gene 33 1031 . + . ID=gene-C9E95_RS18725;Name=C9E95_RS18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18725;old_locus_tag=C9E95_19185 NZ_PYJW01000163.1 Protein Homology CDS 33 1031 . + 0 ID=cds-WP_080203837.1;Parent=gene-C9E95_RS18725;Dbxref=GenBank:WP_080203837.1;Name=WP_080203837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406820.1;locus_tag=C9E95_RS18725;product=hypothetical protein;protein_id=WP_080203837.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 1034 1891 . + . ID=gene-C9E95_RS18730;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=C9E95_RS18730;old_locus_tag=C9E95_19190 NZ_PYJW01000163.1 Protein Homology CDS 1034 1891 . + 0 ID=cds-WP_000398244.1;Parent=gene-C9E95_RS18730;Dbxref=GenBank:WP_000398244.1;Name=WP_000398244.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462983.1;locus_tag=C9E95_RS18730;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000398244.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 2007 4439 . - . ID=gene-C9E95_RS18735;Name=C9E95_RS18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18735;old_locus_tag=C9E95_19195 NZ_PYJW01000163.1 Protein Homology CDS 2007 4439 . - 0 ID=cds-WP_080203836.1;Parent=gene-C9E95_RS18735;Dbxref=GenBank:WP_080203836.1;Name=WP_080203836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=C9E95_RS18735;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_080203836.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 4442 5602 . - . ID=gene-C9E95_RS18740;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=C9E95_RS18740;old_locus_tag=C9E95_19200 NZ_PYJW01000163.1 Protein Homology CDS 4442 5602 . - 0 ID=cds-WP_000197213.1;Parent=gene-C9E95_RS18740;Dbxref=GenBank:WP_000197213.1;Name=WP_000197213.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462981.1;locus_tag=C9E95_RS18740;product=cystathionine gamma-synthase;protein_id=WP_000197213.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 5867 6184 . + . ID=gene-C9E95_RS18745;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=C9E95_RS18745;old_locus_tag=C9E95_19205 NZ_PYJW01000163.1 Protein Homology CDS 5867 6184 . + 0 ID=cds-WP_000852811.1;Parent=gene-C9E95_RS18745;Dbxref=GenBank:WP_000852811.1;Name=WP_000852811.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=C9E95_RS18745;product=met regulon transcriptional regulator MetJ;protein_id=WP_000852811.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 6640 8430 . + . ID=gene-C9E95_RS18750;Name=C9E95_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18750;old_locus_tag=C9E95_19210 NZ_PYJW01000163.1 Protein Homology CDS 6640 8430 . + 0 ID=cds-WP_080203835.1;Parent=gene-C9E95_RS18750;Dbxref=GenBank:WP_080203835.1;Name=WP_080203835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=C9E95_RS18750;product=aryl-sulfate sulfotransferase;protein_id=WP_080203835.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 8631 9293 . + . ID=gene-C9E95_RS18755;Name=C9E95_RS18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18755;old_locus_tag=C9E95_19215 NZ_PYJW01000163.1 Protein Homology CDS 8631 9293 . + 0 ID=cds-WP_080203834.1;Parent=gene-C9E95_RS18755;Dbxref=GenBank:WP_080203834.1;Name=WP_080203834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462978.1;locus_tag=C9E95_RS18755;product=TIGR02117 family protein;protein_id=WP_080203834.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 9338 9550 . - . ID=gene-C9E95_RS18760;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=C9E95_RS18760;old_locus_tag=C9E95_19220 NZ_PYJW01000163.1 Protein Homology CDS 9338 9550 . - 0 ID=cds-WP_000715284.1;Parent=gene-C9E95_RS18760;Dbxref=GenBank:WP_000715284.1;Name=WP_000715284.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462977.1;locus_tag=C9E95_RS18760;product=50S ribosomal protein L31;protein_id=WP_000715284.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 9754 11952 . + . ID=gene-C9E95_RS18765;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=C9E95_RS18765;old_locus_tag=C9E95_19225 NZ_PYJW01000163.1 Protein Homology CDS 9754 11952 . + 0 ID=cds-WP_000109389.1;Parent=gene-C9E95_RS18765;Dbxref=GenBank:WP_000109389.1;Name=WP_000109389.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462976.1;locus_tag=C9E95_RS18765;product=primosomal protein N';protein_id=WP_000109389.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 12107 13132 . + . ID=gene-C9E95_RS18770;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=C9E95_RS18770;old_locus_tag=C9E95_19230 NZ_PYJW01000163.1 Protein Homology CDS 12107 13132 . + 0 ID=cds-WP_000841337.1;Parent=gene-C9E95_RS18770;Dbxref=GenBank:WP_000841337.1;Name=WP_000841337.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462975.1;locus_tag=C9E95_RS18770;product=DNA-binding transcriptional regulator CytR;protein_id=WP_000841337.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 13226 14209 . + . ID=gene-C9E95_RS18775;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=C9E95_RS18775;old_locus_tag=C9E95_19235 NZ_PYJW01000163.1 Protein Homology CDS 13226 14209 . + 0 ID=cds-WP_031624612.1;Parent=gene-C9E95_RS18775;Dbxref=GenBank:WP_031624612.1;Name=WP_031624612.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462974.1;locus_tag=C9E95_RS18775;product=cell division protein FtsN;protein_id=WP_031624612.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 14301 14831 . + . ID=gene-C9E95_RS18780;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=C9E95_RS18780;old_locus_tag=C9E95_19240 NZ_PYJW01000163.1 Protein Homology CDS 14301 14831 . + 0 ID=cds-WP_000208240.1;Parent=gene-C9E95_RS18780;Dbxref=GenBank:WP_000208240.1;Name=WP_000208240.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462973.1;locus_tag=C9E95_RS18780;product=ATP-dependent protease subunit HslV;protein_id=WP_000208240.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 14841 16172 . + . ID=gene-C9E95_RS18785;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=C9E95_RS18785;old_locus_tag=C9E95_19245 NZ_PYJW01000163.1 Protein Homology CDS 14841 16172 . + 0 ID=cds-WP_001293360.1;Parent=gene-C9E95_RS18785;Dbxref=GenBank:WP_001293360.1;Name=WP_001293360.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=C9E95_RS18785;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_001293360.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 16239 17168 . + . ID=gene-C9E95_RS18790;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=C9E95_RS18790;old_locus_tag=C9E95_19250 NZ_PYJW01000163.1 Protein Homology CDS 16239 17168 . + 0 ID=cds-WP_000139639.1;Parent=gene-C9E95_RS18790;Dbxref=GenBank:WP_000139639.1;Name=WP_000139639.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462971.1;locus_tag=C9E95_RS18790;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_000139639.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 17261 17746 . + . ID=gene-C9E95_RS18795;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=C9E95_RS18795;old_locus_tag=C9E95_19255 NZ_PYJW01000163.1 Protein Homology CDS 17261 17746 . + 0 ID=cds-WP_000872918.1;Parent=gene-C9E95_RS18795;Dbxref=GenBank:WP_000872918.1;Name=WP_000872918.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=C9E95_RS18795;product=ribonuclease E activity regulator RraA;protein_id=WP_000872918.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 17968 18207 . - . ID=gene-C9E95_RS18800;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=C9E95_RS18800;old_locus_tag=C9E95_19260 NZ_PYJW01000163.1 Protein Homology CDS 17968 18207 . - 0 ID=cds-WP_000051370.1;Parent=gene-C9E95_RS18800;Dbxref=GenBank:WP_000051370.1;Name=WP_000051370.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229475.1;locus_tag=C9E95_RS18800;product=septal ring assembly protein ZapB;protein_id=WP_000051370.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 18606 19451 . + . ID=gene-C9E95_RS18805;Name=C9E95_RS18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18805;old_locus_tag=C9E95_19265 NZ_PYJW01000163.1 Protein Homology CDS 18606 19451 . + 0 ID=cds-WP_000084285.1;Parent=gene-C9E95_RS18805;Dbxref=GenBank:WP_000084285.1;Name=WP_000084285.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462968.1;locus_tag=C9E95_RS18805;product=MIP/aquaporin family protein;protein_id=WP_000084285.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 19472 20980 . + . ID=gene-C9E95_RS18810;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=C9E95_RS18810;old_locus_tag=C9E95_19270 NZ_PYJW01000163.1 Protein Homology CDS 19472 20980 . + 0 ID=cds-WP_000136808.1;Parent=gene-C9E95_RS18810;Dbxref=GenBank:WP_000136808.1;Name=WP_000136808.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462967.1;locus_tag=C9E95_RS18810;product=glycerol kinase GlpK;protein_id=WP_000136808.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 21092 22102 . + . ID=gene-C9E95_RS18815;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=C9E95_RS18815;old_locus_tag=C9E95_19275 NZ_PYJW01000163.1 Protein Homology CDS 21092 22102 . + 0 ID=cds-WP_001250624.1;Parent=gene-C9E95_RS18815;Dbxref=GenBank:WP_001250624.1;Name=WP_001250624.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462966.1;locus_tag=C9E95_RS18815;product=class II fructose-bisphosphatase;protein_id=WP_001250624.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 22199 22945 . + . ID=gene-C9E95_RS18820;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=C9E95_RS18820;old_locus_tag=C9E95_19280 NZ_PYJW01000163.1 Protein Homology CDS 22199 22945 . + 0 ID=cds-WP_000796289.1;Parent=gene-C9E95_RS18820;Dbxref=GenBank:WP_000796289.1;Name=WP_000796289.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462965.1;locus_tag=C9E95_RS18820;product=ferredoxin--NADP(+) reductase;protein_id=WP_000796289.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 23052 23480 . - . ID=gene-C9E95_RS18825;Name=C9E95_RS18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18825;old_locus_tag=C9E95_19285 NZ_PYJW01000163.1 Protein Homology CDS 23052 23480 . - 0 ID=cds-WP_000155237.1;Parent=gene-C9E95_RS18825;Dbxref=GenBank:WP_000155237.1;Name=WP_000155237.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462964.1;locus_tag=C9E95_RS18825;product=DUF805 domain-containing protein;protein_id=WP_000155237.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 23581 24177 . + . ID=gene-C9E95_RS18830;Name=C9E95_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18830;old_locus_tag=C9E95_19290 NZ_PYJW01000163.1 Protein Homology CDS 23581 24177 . + 0 ID=cds-WP_000802241.1;Parent=gene-C9E95_RS18830;Dbxref=GenBank:WP_000802241.1;Name=WP_000802241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462963.1;locus_tag=C9E95_RS18830;product=YiiQ family protein;protein_id=WP_000802241.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 24290 25057 . + . ID=gene-C9E95_RS18835;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=C9E95_RS18835;old_locus_tag=C9E95_19295 NZ_PYJW01000163.1 Protein Homology CDS 24290 25057 . + 0 ID=cds-WP_001216339.1;Parent=gene-C9E95_RS18835;Dbxref=GenBank:WP_001216339.1;Name=WP_001216339.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462962.1;locus_tag=C9E95_RS18835;product=triose-phosphate isomerase;protein_id=WP_001216339.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 25149 25913 . - . ID=gene-C9E95_RS18840;Name=C9E95_RS18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18840;old_locus_tag=C9E95_19300 NZ_PYJW01000163.1 Protein Homology CDS 25149 25913 . - 0 ID=cds-WP_023993654.1;Parent=gene-C9E95_RS18840;Dbxref=GenBank:WP_023993654.1;Name=WP_023993654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462961.1;locus_tag=C9E95_RS18840;product=epimerase;protein_id=WP_023993654.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 25923 26213 . - . ID=gene-C9E95_RS18845;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=C9E95_RS18845;old_locus_tag=C9E95_19305 NZ_PYJW01000163.1 Protein Homology CDS 25923 26213 . - 0 ID=cds-WP_001543603.1;Parent=gene-C9E95_RS18845;Dbxref=GenBank:WP_001543603.1;Name=WP_001543603.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=C9E95_RS18845;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_001543603.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 26296 27171 . - . ID=gene-C9E95_RS18850;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=C9E95_RS18850;old_locus_tag=C9E95_19310 NZ_PYJW01000163.1 Protein Homology CDS 26296 27171 . - 0 ID=cds-WP_000774146.1;Parent=gene-C9E95_RS18850;Dbxref=GenBank:WP_000774146.1;Name=WP_000774146.1;gbkey=CDS;gene=lsrF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774144.1;locus_tag=C9E95_RS18850;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase LsrF;protein_id=WP_000774146.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 27200 28222 . - . ID=gene-C9E95_RS18855;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=C9E95_RS18855;old_locus_tag=C9E95_19315 NZ_PYJW01000163.1 Protein Homology CDS 27200 28222 . - 0 ID=cds-WP_000090737.1;Parent=gene-C9E95_RS18855;Dbxref=GenBank:WP_000090737.1;Name=WP_000090737.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462958.1;locus_tag=C9E95_RS18855;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_000090737.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 28251 29252 . - . ID=gene-C9E95_RS18860;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=C9E95_RS18860;old_locus_tag=C9E95_19320 NZ_PYJW01000163.1 Protein Homology CDS 28251 29252 . - 0 ID=cds-WP_072100810.1;Parent=gene-C9E95_RS18860;Dbxref=GenBank:WP_072100810.1;Name=WP_072100810.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462957.1;locus_tag=C9E95_RS18860;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WP_072100810.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 29249 30292 . - . ID=gene-C9E95_RS18865;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=C9E95_RS18865;old_locus_tag=C9E95_19325 NZ_PYJW01000163.1 Protein Homology CDS 29249 30292 . - 0 ID=cds-WP_000911133.1;Parent=gene-C9E95_RS18865;Dbxref=GenBank:WP_000911133.1;Name=WP_000911133.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462956.1;locus_tag=C9E95_RS18865;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_000911133.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 30286 31821 . - . ID=gene-C9E95_RS18870;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=C9E95_RS18870;old_locus_tag=C9E95_19330 NZ_PYJW01000163.1 Protein Homology CDS 30286 31821 . - 0 ID=cds-WP_001167248.1;Parent=gene-C9E95_RS18870;Dbxref=GenBank:WP_001167248.1;Name=WP_001167248.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462955.1;locus_tag=C9E95_RS18870;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_001167248.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 32077 33036 . + . ID=gene-C9E95_RS18875;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=C9E95_RS18875;old_locus_tag=C9E95_19335 NZ_PYJW01000163.1 Protein Homology CDS 32077 33036 . + 0 ID=cds-WP_001283049.1;Parent=gene-C9E95_RS18875;Dbxref=GenBank:WP_001283049.1;Name=WP_001283049.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462954.1;locus_tag=C9E95_RS18875;product=transcriptional regulator LsrR;protein_id=WP_001283049.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 33123 34715 . + . ID=gene-C9E95_RS18880;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=C9E95_RS18880;old_locus_tag=C9E95_19340 NZ_PYJW01000163.1 Protein Homology CDS 33123 34715 . + 0 ID=cds-WP_080203832.1;Parent=gene-C9E95_RS18880;Dbxref=GenBank:WP_080203832.1;Name=WP_080203832.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462953.1;locus_tag=C9E95_RS18880;product=autoinducer-2 kinase;protein_id=WP_080203832.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 34729 35079 . + . ID=gene-C9E95_RS18885;Name=C9E95_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18885;old_locus_tag=C9E95_19345 NZ_PYJW01000163.1 Protein Homology CDS 34729 35079 . + 0 ID=cds-WP_001173080.1;Parent=gene-C9E95_RS18885;Dbxref=GenBank:WP_001173080.1;Name=WP_001173080.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742380.1;locus_tag=C9E95_RS18885;product=cupin domain-containing protein;protein_id=WP_001173080.1;transl_table=11 NZ_PYJW01000163.1 RefSeq pseudogene 35169 35309 . - . ID=gene-C9E95_RS23320;Name=C9E95_RS23320;end_range=35309,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23320;old_locus_tag=C9E95_19350;partial=true;pseudo=true NZ_PYJW01000163.1 Protein Homology CDS 35169 35309 . - 0 ID=cds-C9E95_RS23320;Parent=gene-C9E95_RS23320;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008654,GO:0008715,GO:0016020;end_range=35309,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=C9E95_RS23320;partial=true;product=CDP-diacylglycerol diphosphatase;pseudo=true;transl_table=11 NZ_PYJW01000163.1 RefSeq pseudogene 35361 35486 . - . ID=gene-C9E95_RS23325;Name=C9E95_RS23325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23325;old_locus_tag=C9E95_19355;partial=true;pseudo=true;start_range=.,35361 NZ_PYJW01000163.1 Protein Homology CDS 35361 35486 . - 0 ID=cds-C9E95_RS23325;Parent=gene-C9E95_RS23325;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229472.1;locus_tag=C9E95_RS23325;partial=true;product=hypothetical protein;pseudo=true;start_range=.,35361;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 35584 36306 . - . ID=gene-C9E95_RS18900;Name=C9E95_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18900;old_locus_tag=C9E95_19360 NZ_PYJW01000163.1 Protein Homology CDS 35584 36306 . - 0 ID=cds-WP_001535809.1;Parent=gene-C9E95_RS18900;Dbxref=GenBank:WP_001535809.1;Name=WP_001535809.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462949.1;locus_tag=C9E95_RS18900;product=GntR family transcriptional regulator;protein_id=WP_001535809.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 36369 37409 . - . ID=gene-C9E95_RS18905;Name=C9E95_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18905;old_locus_tag=C9E95_19365 NZ_PYJW01000163.1 Protein Homology CDS 36369 37409 . - 0 ID=cds-WP_080203830.1;Parent=gene-C9E95_RS18905;Dbxref=GenBank:WP_080203830.1;Name=WP_080203830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462948.1;locus_tag=C9E95_RS18905;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_080203830.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 37419 38378 . - . ID=gene-C9E95_RS18910;Name=C9E95_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18910;old_locus_tag=C9E95_19370 NZ_PYJW01000163.1 Protein Homology CDS 37419 38378 . - 0 ID=cds-WP_000646504.1;Parent=gene-C9E95_RS18910;Dbxref=GenBank:WP_000646504.1;Name=WP_000646504.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462947.1;locus_tag=C9E95_RS18910;product=aminoimidazole riboside kinase;protein_id=WP_000646504.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 38389 39723 . - . ID=gene-C9E95_RS18915;Name=C9E95_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18915;old_locus_tag=C9E95_19375 NZ_PYJW01000163.1 Protein Homology CDS 38389 39723 . - 0 ID=cds-WP_000777317.1;Parent=gene-C9E95_RS18915;Dbxref=GenBank:WP_000777317.1;Name=WP_000777317.1;Ontology_term=GO:0008643,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=C9E95_RS18915;product=MFS transporter;protein_id=WP_000777317.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 39988 40743 . - . ID=gene-C9E95_RS18920;Name=C9E95_RS18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18920;old_locus_tag=C9E95_19380 NZ_PYJW01000163.1 Protein Homology CDS 39988 40743 . - 0 ID=cds-WP_000750754.1;Parent=gene-C9E95_RS18920;Dbxref=GenBank:WP_000750754.1;Name=WP_000750754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=C9E95_RS18920;product=CDP-diacylglycerol diphosphatase;protein_id=WP_000750754.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 40844 41833 . - . ID=gene-C9E95_RS18925;Name=C9E95_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18925;old_locus_tag=C9E95_19385 NZ_PYJW01000163.1 Protein Homology CDS 40844 41833 . - 0 ID=cds-WP_000758714.1;Parent=gene-C9E95_RS18925;Dbxref=GenBank:WP_000758714.1;Name=WP_000758714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=C9E95_RS18925;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_000758714.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 42037 42999 . - . ID=gene-C9E95_RS18930;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=C9E95_RS18930;old_locus_tag=C9E95_19390 NZ_PYJW01000163.1 Protein Homology CDS 42037 42999 . - 0 ID=cds-WP_000591793.1;Parent=gene-C9E95_RS18930;Dbxref=GenBank:WP_000591793.1;Name=WP_000591793.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=C9E95_RS18930;product=6-phosphofructokinase;protein_id=WP_000591793.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 43184 44086 . - . ID=gene-C9E95_RS18935;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=C9E95_RS18935;old_locus_tag=C9E95_19395 NZ_PYJW01000163.1 Protein Homology CDS 43184 44086 . - 0 ID=cds-WP_001077320.1;Parent=gene-C9E95_RS18935;Dbxref=GenBank:WP_001077320.1;Name=WP_001077320.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462942.1;locus_tag=C9E95_RS18935;product=CDF family cation-efflux transporter FieF;protein_id=WP_001077320.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 44234 44734 . - . ID=gene-C9E95_RS18940;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=C9E95_RS18940;old_locus_tag=C9E95_19400 NZ_PYJW01000163.1 Protein Homology CDS 44234 44734 . - 0 ID=cds-WP_001233463.1;Parent=gene-C9E95_RS18940;Dbxref=GenBank:WP_001233463.1;Name=WP_001233463.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462941.1;locus_tag=C9E95_RS18940;product=cell-envelope stress modulator CpxP;protein_id=WP_001233463.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 44885 45583 . + . ID=gene-C9E95_RS18945;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=C9E95_RS18945;old_locus_tag=C9E95_19405 NZ_PYJW01000163.1 Protein Homology CDS 44885 45583 . + 0 ID=cds-WP_001033731.1;Parent=gene-C9E95_RS18945;Dbxref=GenBank:WP_001033731.1;Name=WP_001033731.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=C9E95_RS18945;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_001033731.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 45580 46953 . + . ID=gene-C9E95_RS18950;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=C9E95_RS18950;old_locus_tag=C9E95_19410 NZ_PYJW01000163.1 Protein Homology CDS 45580 46953 . + 0 ID=cds-WP_000580402.1;Parent=gene-C9E95_RS18950;Dbxref=GenBank:WP_000580402.1;Name=WP_000580402.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462939.1;locus_tag=C9E95_RS18950;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_000580402.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 47004 47399 . - . ID=gene-C9E95_RS18955;Name=C9E95_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18955;old_locus_tag=C9E95_19415 NZ_PYJW01000163.1 Protein Homology CDS 47004 47399 . - 0 ID=cds-WP_000133441.1;Parent=gene-C9E95_RS18955;Dbxref=GenBank:WP_000133441.1;Name=WP_000133441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462938.1;locus_tag=C9E95_RS18955;product=nuclear transport factor 2 family protein;protein_id=WP_000133441.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 47411 48100 . - . ID=gene-C9E95_RS18960;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=C9E95_RS18960;old_locus_tag=C9E95_19420 NZ_PYJW01000163.1 Protein Homology CDS 47411 48100 . - 0 ID=cds-WP_165450963.1;Parent=gene-C9E95_RS18960;Dbxref=GenBank:WP_165450963.1;Name=WP_165450963.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559227.1;locus_tag=C9E95_RS18960;product=6-hydroxyaminopurine reductase;protein_id=WP_165450963.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 48170 48790 . - . ID=gene-C9E95_RS18965;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=C9E95_RS18965;old_locus_tag=C9E95_19425 NZ_PYJW01000163.1 Protein Homology CDS 48170 48790 . - 0 ID=cds-WP_080203828.1;Parent=gene-C9E95_RS18965;Dbxref=GenBank:WP_080203828.1;Name=WP_080203828.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=C9E95_RS18965;product=superoxide dismutase [Mn];protein_id=WP_080203828.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 49119 50102 . + . ID=gene-C9E95_RS18970;Name=C9E95_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18970;old_locus_tag=C9E95_19430 NZ_PYJW01000163.1 Protein Homology CDS 49119 50102 . + 0 ID=cds-WP_000812816.1;Parent=gene-C9E95_RS18970;Dbxref=GenBank:WP_000812816.1;Name=WP_000812816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=C9E95_RS18970;product=TRAP transporter substrate-binding protein;protein_id=WP_000812816.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 50121 50636 . + . ID=gene-C9E95_RS18975;Name=C9E95_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18975;old_locus_tag=C9E95_19435 NZ_PYJW01000163.1 Protein Homology CDS 50121 50636 . + 0 ID=cds-WP_001091410.1;Parent=gene-C9E95_RS18975;Dbxref=GenBank:WP_001091410.1;Name=WP_001091410.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462934.1;locus_tag=C9E95_RS18975;product=TRAP transporter small permease;protein_id=WP_001091410.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 50629 51936 . + . ID=gene-C9E95_RS18980;Name=C9E95_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18980;old_locus_tag=C9E95_19440 NZ_PYJW01000163.1 Protein Homology CDS 50629 51936 . + 0 ID=cds-WP_080203827.1;Parent=gene-C9E95_RS18980;Dbxref=GenBank:WP_080203827.1;Name=WP_080203827.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462933.1;locus_tag=C9E95_RS18980;product=TRAP transporter large permease;protein_id=WP_080203827.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 52095 52778 . - . ID=gene-C9E95_RS18985;Name=C9E95_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18985;old_locus_tag=C9E95_19445 NZ_PYJW01000163.1 Protein Homology CDS 52095 52778 . - 0 ID=cds-WP_000378721.1;Parent=gene-C9E95_RS18985;Dbxref=GenBank:WP_000378721.1;Name=WP_000378721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462932.3;locus_tag=C9E95_RS18985;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_000378721.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 53397 54431 . + . ID=gene-C9E95_RS18990;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=C9E95_RS18990;old_locus_tag=C9E95_19450 NZ_PYJW01000163.1 Protein Homology CDS 53397 54431 . + 0 ID=cds-WP_000063541.1;Parent=gene-C9E95_RS18990;Dbxref=GenBank:WP_000063541.1;Name=WP_000063541.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=C9E95_RS18990;product=L-rhamnose/proton symporter RhaT;protein_id=WP_000063541.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 54428 55276 . - . ID=gene-C9E95_RS18995;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=C9E95_RS18995;old_locus_tag=C9E95_19455 NZ_PYJW01000163.1 Protein Homology CDS 54428 55276 . - 0 ID=cds-WP_000013290.1;Parent=gene-C9E95_RS18995;Dbxref=GenBank:WP_000013290.1;Name=WP_000013290.1;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462930.1;locus_tag=C9E95_RS18995;product=HTH-type transcriptional activator RhaR;protein_id=WP_000013290.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 55429 56265 . - . ID=gene-C9E95_RS19000;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=C9E95_RS19000;old_locus_tag=C9E95_19465 NZ_PYJW01000163.1 Protein Homology CDS 55429 56265 . - 0 ID=cds-WP_000217112.1;Parent=gene-C9E95_RS19000;Dbxref=GenBank:WP_000217112.1;Name=WP_000217112.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462929.1;locus_tag=C9E95_RS19000;product=HTH-type transcriptional activator RhaS;protein_id=WP_000217112.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 56553 58022 . + . ID=gene-C9E95_RS19005;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=C9E95_RS19005;old_locus_tag=C9E95_19470 NZ_PYJW01000163.1 Protein Homology CDS 56553 58022 . + 0 ID=cds-WP_020437536.1;Parent=gene-C9E95_RS19005;Dbxref=GenBank:WP_020437536.1;Name=WP_020437536.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462928.1;locus_tag=C9E95_RS19005;product=rhamnulokinase;protein_id=WP_020437536.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 58019 59278 . + . ID=gene-C9E95_RS19010;Name=C9E95_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19010;old_locus_tag=C9E95_19475 NZ_PYJW01000163.1 Protein Homology CDS 58019 59278 . + 0 ID=cds-WP_000211469.1;Parent=gene-C9E95_RS19010;Dbxref=GenBank:WP_000211469.1;Name=WP_000211469.1;Ontology_term=GO:0019299,GO:0008740,GO:0030145;gbkey=CDS;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462927.1;locus_tag=C9E95_RS19010;product=L-rhamnose isomerase;protein_id=WP_000211469.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 59421 60248 . + . ID=gene-C9E95_RS19015;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=C9E95_RS19015;old_locus_tag=C9E95_19480 NZ_PYJW01000163.1 Protein Homology CDS 59421 60248 . + 0 ID=cds-WP_001179685.1;Parent=gene-C9E95_RS19015;Dbxref=GenBank:WP_001179685.1;Name=WP_001179685.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462926.1;locus_tag=C9E95_RS19015;product=rhamnulose-1-phosphate aldolase;protein_id=WP_001179685.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 60375 61523 . + . ID=gene-C9E95_RS19020;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=C9E95_RS19020;old_locus_tag=C9E95_19485 NZ_PYJW01000163.1 Protein Homology CDS 60375 61523 . + 0 ID=cds-WP_000009253.1;Parent=gene-C9E95_RS19020;Dbxref=GenBank:WP_000009253.1;Name=WP_000009253.1;Ontology_term=GO:0008912;gbkey=CDS;gene=fucO;go_function=lactaldehyde reductase activity|0008912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462925.1;locus_tag=C9E95_RS19020;product=lactaldehyde reductase;protein_id=WP_000009253.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 61520 61834 . + . ID=gene-C9E95_RS19025;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=C9E95_RS19025;old_locus_tag=C9E95_19490 NZ_PYJW01000163.1 Protein Homology CDS 61520 61834 . + 0 ID=cds-WP_000619478.1;Parent=gene-C9E95_RS19025;Dbxref=GenBank:WP_000619478.1;Name=WP_000619478.1;Ontology_term=GO:0019299,GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462924.1;locus_tag=C9E95_RS19025;product=L-rhamnose mutarotase;protein_id=WP_000619478.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 61923 62471 . - . ID=gene-C9E95_RS19030;Name=C9E95_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19030;old_locus_tag=C9E95_19495 NZ_PYJW01000163.1 Protein Homology CDS 61923 62471 . - 0 ID=cds-WP_001517951.1;Parent=gene-C9E95_RS19030;Dbxref=GenBank:WP_001517951.1;Name=WP_001517951.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1;locus_tag=C9E95_RS19030;product=helix-turn-helix domain-containing protein;protein_id=WP_001517951.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 62572 63231 . + . ID=gene-C9E95_RS19035;Name=C9E95_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19035;old_locus_tag=C9E95_19500 NZ_PYJW01000163.1 Protein Homology CDS 62572 63231 . + 0 ID=cds-WP_000683586.1;Parent=gene-C9E95_RS19035;Dbxref=GenBank:WP_000683586.1;Name=WP_000683586.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462922.1;locus_tag=C9E95_RS19035;product=AzlC family ABC transporter permease;protein_id=WP_000683586.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 63231 63554 . + . ID=gene-C9E95_RS19040;Name=C9E95_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19040;old_locus_tag=C9E95_19505 NZ_PYJW01000163.1 Protein Homology CDS 63231 63554 . + 0 ID=cds-WP_000527676.1;Parent=gene-C9E95_RS19040;Dbxref=GenBank:WP_000527676.1;Name=WP_000527676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=C9E95_RS19040;product=AzlD domain-containing protein;protein_id=WP_000527676.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 63898 64998 . - . ID=gene-C9E95_RS19045;Name=C9E95_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19045;old_locus_tag=C9E95_19510 NZ_PYJW01000163.1 Protein Homology CDS 63898 64998 . - 0 ID=cds-WP_000828039.1;Parent=gene-C9E95_RS19045;Dbxref=GenBank:WP_000828039.1;Name=WP_000828039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828052.1;locus_tag=C9E95_RS19045;product=YiiG family protein;protein_id=WP_000828039.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 65181 66212 . + . ID=gene-C9E95_RS19050;Name=C9E95_RS19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19050;old_locus_tag=C9E95_19515 NZ_PYJW01000163.1 Protein Homology CDS 65181 66212 . + 0 ID=cds-WP_000710966.1;Parent=gene-C9E95_RS19050;Dbxref=GenBank:WP_000710966.1;Name=WP_000710966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462919.1;locus_tag=C9E95_RS19050;product=YiiG family protein;protein_id=WP_000710966.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 66480 67316 . - . ID=gene-C9E95_RS19055;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=C9E95_RS19055;old_locus_tag=C9E95_19520 NZ_PYJW01000163.1 Protein Homology CDS 66480 67316 . - 0 ID=cds-WP_001059740.1;Parent=gene-C9E95_RS19055;Dbxref=GenBank:WP_001059740.1;Name=WP_001059740.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462918.1;locus_tag=C9E95_RS19055;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_001059740.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 67511 70561 . + . ID=gene-C9E95_RS19065;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=C9E95_RS19065;old_locus_tag=C9E95_19530 NZ_PYJW01000163.1 Protein Homology CDS 67511 70561 . + 0 ID=cds-WP_077248424.1;Parent=gene-C9E95_RS19065;Dbxref=GenBank:WP_077248424.1;Name=WP_077248424.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=C9E95_RS19065;product=formate dehydrogenase-N subunit alpha;protein_id=WP_077248424.1;transl_except=(pos:68096..68098%2Caa:Sec);transl_table=11 NZ_PYJW01000163.1 RefSeq gene 70574 71476 . + . ID=gene-C9E95_RS19070;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=C9E95_RS19070;old_locus_tag=C9E95_19535 NZ_PYJW01000163.1 Protein Homology CDS 70574 71476 . + 0 ID=cds-WP_000331364.1;Parent=gene-C9E95_RS19070;Dbxref=GenBank:WP_000331364.1;Name=WP_000331364.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462916.1;locus_tag=C9E95_RS19070;product=formate dehydrogenase subunit beta;protein_id=WP_000331364.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 71473 72108 . + . ID=gene-C9E95_RS19075;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=C9E95_RS19075;old_locus_tag=C9E95_19540 NZ_PYJW01000163.1 Protein Homology CDS 71473 72108 . + 0 ID=cds-WP_000829025.1;Parent=gene-C9E95_RS19075;Dbxref=GenBank:WP_000829025.1;Name=WP_000829025.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462915.1;locus_tag=C9E95_RS19075;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_000829025.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 72105 73034 . + . ID=gene-C9E95_RS19080;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=C9E95_RS19080;old_locus_tag=C9E95_19545 NZ_PYJW01000163.1 Protein Homology CDS 72105 73034 . + 0 ID=cds-WP_000027730.1;Parent=gene-C9E95_RS19080;Dbxref=GenBank:WP_000027730.1;Name=WP_000027730.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=C9E95_RS19080;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_000027730.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 73081 73371 . - . ID=gene-C9E95_RS19085;Name=C9E95_RS19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19085;old_locus_tag=C9E95_19550 NZ_PYJW01000163.1 Protein Homology CDS 73081 73371 . - 0 ID=cds-WP_000362050.1;Parent=gene-C9E95_RS19085;Dbxref=GenBank:WP_000362050.1;Name=WP_000362050.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264433.1;locus_tag=C9E95_RS19085;product=helix-turn-helix domain-containing protein;protein_id=WP_000362050.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 73372 73683 . - . ID=gene-C9E95_RS19090;Name=C9E95_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19090;old_locus_tag=C9E95_19555 NZ_PYJW01000163.1 Protein Homology CDS 73372 73683 . - 0 ID=cds-WP_001159637.1;Parent=gene-C9E95_RS19090;Dbxref=GenBank:WP_001159637.1;Name=WP_001159637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001159636.1;locus_tag=C9E95_RS19090;product=hypothetical protein;protein_id=WP_001159637.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 73901 74830 . + . ID=gene-C9E95_RS19095;Name=C9E95_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19095;old_locus_tag=C9E95_19560 NZ_PYJW01000163.1 Protein Homology CDS 73901 74830 . + 0 ID=cds-WP_001127708.1;Parent=gene-C9E95_RS19095;Dbxref=GenBank:WP_001127708.1;Name=WP_001127708.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462912.1;locus_tag=C9E95_RS19095;product=alpha/beta hydrolase;protein_id=WP_001127708.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 74916 75227 . + . ID=gene-C9E95_RS19100;Name=C9E95_RS19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19100;old_locus_tag=C9E95_19565 NZ_PYJW01000163.1 Protein Homology CDS 74916 75227 . + 0 ID=cds-WP_000558166.1;Parent=gene-C9E95_RS19100;Dbxref=GenBank:WP_000558166.1;Name=WP_000558166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462911.1;locus_tag=C9E95_RS19100;product=type II toxin-antitoxin system HigB family toxin;protein_id=WP_000558166.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 75224 75670 . + . ID=gene-C9E95_RS19105;Name=C9E95_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19105;old_locus_tag=C9E95_19570 NZ_PYJW01000163.1 Protein Homology CDS 75224 75670 . + 0 ID=cds-WP_001259009.1;Parent=gene-C9E95_RS19105;Dbxref=GenBank:WP_001259009.1;Name=WP_001259009.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462910.3;locus_tag=C9E95_RS19105;product=helix-turn-helix domain-containing protein;protein_id=WP_001259009.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 75685 76626 . - . ID=gene-C9E95_RS19110;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=C9E95_RS19110;old_locus_tag=C9E95_19575 NZ_PYJW01000163.1 Protein Homology CDS 75685 76626 . - 0 ID=cds-WP_001518251.1;Parent=gene-C9E95_RS19110;Dbxref=GenBank:WP_001518251.1;Name=WP_001518251.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=C9E95_RS19110;product=fatty acid biosynthesis protein FabY;protein_id=WP_001518251.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 76671 77108 . - . ID=gene-C9E95_RS19115;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=C9E95_RS19115;old_locus_tag=C9E95_19580 NZ_PYJW01000163.1 Protein Homology CDS 76671 77108 . - 0 ID=cds-WP_000560969.1;Parent=gene-C9E95_RS19115;Dbxref=GenBank:WP_000560969.1;Name=WP_000560969.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=C9E95_RS19115;product=D-aminoacyl-tRNA deacylase;protein_id=WP_000560969.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 77105 77977 . - . ID=gene-C9E95_RS19120;Name=C9E95_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19120;old_locus_tag=C9E95_19585 NZ_PYJW01000163.1 Protein Homology CDS 77105 77977 . - 0 ID=cds-WP_079943200.1;Parent=gene-C9E95_RS19120;Dbxref=GenBank:WP_079943200.1;Name=WP_079943200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462907.1;locus_tag=C9E95_RS19120;product=virulence factor BrkB family protein;protein_id=WP_079943200.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 77971 78570 . - . ID=gene-C9E95_RS19125;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=C9E95_RS19125;old_locus_tag=C9E95_19590 NZ_PYJW01000163.1 Protein Homology CDS 77971 78570 . - 0 ID=cds-WP_000965698.1;Parent=gene-C9E95_RS19125;Dbxref=GenBank:WP_000965698.1;Name=WP_000965698.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462906.1;locus_tag=C9E95_RS19125;product=glucose-1-phosphatase;protein_id=WP_000965698.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 78761 79564 . - . ID=gene-C9E95_RS19130;Name=C9E95_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19130;old_locus_tag=C9E95_19595 NZ_PYJW01000163.1 Protein Homology CDS 78761 79564 . - 0 ID=cds-WP_000059693.1;Parent=gene-C9E95_RS19130;Dbxref=GenBank:WP_000059693.1;Name=WP_000059693.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462905.1;locus_tag=C9E95_RS19130;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000059693.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 79598 80494 . - . ID=gene-C9E95_RS19135;Name=C9E95_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19135;old_locus_tag=C9E95_19600 NZ_PYJW01000163.1 Protein Homology CDS 79598 80494 . - 0 ID=cds-WP_001520529.1;Parent=gene-C9E95_RS19135;Dbxref=GenBank:WP_001520529.1;Name=WP_001520529.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462904.3;locus_tag=C9E95_RS19135;product=sugar kinase;protein_id=WP_001520529.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 80660 81556 . + . ID=gene-C9E95_RS19140;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=C9E95_RS19140;old_locus_tag=C9E95_19605 NZ_PYJW01000163.1 Protein Homology CDS 80660 81556 . + 0 ID=cds-WP_000268248.1;Parent=gene-C9E95_RS19140;Dbxref=GenBank:WP_000268248.1;Name=WP_000268248.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462903.1;locus_tag=C9E95_RS19140;product=sulfolactaldehyde 3-reductase;protein_id=WP_000268248.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 81579 82457 . + . ID=gene-C9E95_RS19145;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=C9E95_RS19145;old_locus_tag=C9E95_19610 NZ_PYJW01000163.1 Protein Homology CDS 81579 82457 . + 0 ID=cds-WP_001067413.1;Parent=gene-C9E95_RS19145;Dbxref=GenBank:WP_001067413.1;Name=WP_001067413.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462902.1;locus_tag=C9E95_RS19145;product=sulfofructosephosphate aldolase;protein_id=WP_001067413.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 82473 83714 . + . ID=gene-C9E95_RS19150;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=C9E95_RS19150;old_locus_tag=C9E95_19615 NZ_PYJW01000163.1 Protein Homology CDS 82473 83714 . + 0 ID=cds-WP_000870942.1;Parent=gene-C9E95_RS19150;Dbxref=GenBank:WP_000870942.1;Name=WP_000870942.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462901.1;locus_tag=C9E95_RS19150;product=sulfoquinovose isomerase;protein_id=WP_000870942.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 83718 84575 . + . ID=gene-C9E95_RS19155;Name=C9E95_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19155;old_locus_tag=C9E95_19620 NZ_PYJW01000163.1 Protein Homology CDS 83718 84575 . + 0 ID=cds-WP_023993694.1;Parent=gene-C9E95_RS19155;Dbxref=GenBank:WP_023993694.1;Name=WP_023993694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462900.3;locus_tag=C9E95_RS19155;product=aldose-1-epimerase;protein_id=WP_023993694.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 84619 86655 . + . ID=gene-C9E95_RS19160;Name=C9E95_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19160;old_locus_tag=C9E95_19625 NZ_PYJW01000163.1 Protein Homology CDS 84619 86655 . + 0 ID=cds-WP_023993695.1;Parent=gene-C9E95_RS19160;Dbxref=GenBank:WP_023993695.1;Name=WP_023993695.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462899.1;locus_tag=C9E95_RS19160;product=alpha-glucosidase;protein_id=WP_023993695.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 86701 88083 . + . ID=gene-C9E95_RS19165;Name=C9E95_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19165;old_locus_tag=C9E95_19630 NZ_PYJW01000163.1 Protein Homology CDS 86701 88083 . + 0 ID=cds-WP_000084250.1;Parent=gene-C9E95_RS19165;Dbxref=GenBank:WP_000084250.1;Name=WP_000084250.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462898.1;locus_tag=C9E95_RS19165;product=MFS transporter;protein_id=WP_000084250.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 88129 89550 . + . ID=gene-C9E95_RS19170;Name=C9E95_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19170;old_locus_tag=C9E95_19635 NZ_PYJW01000163.1 Protein Homology CDS 88129 89550 . + 0 ID=cds-WP_000064891.1;Parent=gene-C9E95_RS19170;Dbxref=GenBank:WP_000064891.1;Name=WP_000064891.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462897.1;locus_tag=C9E95_RS19170;product=MFS transporter;protein_id=WP_000064891.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 89618 90310 . + . ID=gene-C9E95_RS19175;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=C9E95_RS19175;old_locus_tag=C9E95_19640 NZ_PYJW01000163.1 Protein Homology CDS 89618 90310 . + 0 ID=cds-WP_000838828.1;Parent=gene-C9E95_RS19175;Dbxref=GenBank:WP_000838828.1;Name=WP_000838828.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462896.1;locus_tag=C9E95_RS19175;product=porin OmpL;protein_id=WP_000838828.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 90467 91315 . + . ID=gene-C9E95_RS19180;Name=C9E95_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19180;old_locus_tag=C9E95_19645 NZ_PYJW01000163.1 Protein Homology CDS 90467 91315 . + 0 ID=cds-WP_023993696.1;Parent=gene-C9E95_RS19180;Dbxref=GenBank:WP_023993696.1;Name=WP_023993696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462895.1;locus_tag=C9E95_RS19180;product=STM4015 family protein;protein_id=WP_023993696.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 91328 92353 . + . ID=gene-C9E95_RS19185;Name=C9E95_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19185;old_locus_tag=C9E95_19650 NZ_PYJW01000163.1 Protein Homology CDS 91328 92353 . + 0 ID=cds-WP_000337354.1;Parent=gene-C9E95_RS19185;Dbxref=GenBank:WP_000337354.1;Name=WP_000337354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462894.3;locus_tag=C9E95_RS19185;product=STM4014 family protein;protein_id=WP_000337354.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 92346 93221 . + . ID=gene-C9E95_RS19190;Name=C9E95_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19190;old_locus_tag=C9E95_19655 NZ_PYJW01000163.1 Protein Homology CDS 92346 93221 . + 0 ID=cds-WP_023993697.1;Parent=gene-C9E95_RS19190;Dbxref=GenBank:WP_023993697.1;Name=WP_023993697.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462893.3;locus_tag=C9E95_RS19190;product=STM4013/SEN3800 family hydrolase;protein_id=WP_023993697.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 93223 94464 . + . ID=gene-C9E95_RS19195;Name=C9E95_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19195;old_locus_tag=C9E95_19660 NZ_PYJW01000163.1 Protein Homology CDS 93223 94464 . + 0 ID=cds-WP_001062063.1;Parent=gene-C9E95_RS19195;Dbxref=GenBank:WP_001062063.1;Name=WP_001062063.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462892.1;locus_tag=C9E95_RS19195;product=STM4012 family radical SAM protein;protein_id=WP_001062063.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 94461 95339 . + . ID=gene-C9E95_RS19200;Name=C9E95_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19200;old_locus_tag=C9E95_19665 NZ_PYJW01000163.1 Protein Homology CDS 94461 95339 . + 0 ID=cds-WP_001520166.1;Parent=gene-C9E95_RS19200;Dbxref=GenBank:WP_001520166.1;Name=WP_001520166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462891.1;locus_tag=C9E95_RS19200;product=STM4011 family radical SAM protein;protein_id=WP_001520166.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 95324 96058 . + . ID=gene-C9E95_RS19205;Name=C9E95_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19205;old_locus_tag=C9E95_19670 NZ_PYJW01000163.1 Protein Homology CDS 95324 96058 . + 0 ID=cds-WP_001270585.1;Parent=gene-C9E95_RS19205;Dbxref=GenBank:WP_001270585.1;Name=WP_001270585.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462890.1;locus_tag=C9E95_RS19205;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_001270585.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 96113 97936 . - . ID=gene-C9E95_RS19210;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=C9E95_RS19210;old_locus_tag=C9E95_19675 NZ_PYJW01000163.1 Protein Homology CDS 96113 97936 . - 0 ID=cds-WP_000572064.1;Parent=gene-C9E95_RS19210;Dbxref=GenBank:WP_000572064.1;Name=WP_000572064.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462889.1;locus_tag=C9E95_RS19210;product=ribosome-dependent GTPase TypA;protein_id=WP_000572064.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 98312 99721 . + . ID=gene-C9E95_RS19215;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=C9E95_RS19215;old_locus_tag=C9E95_19685 NZ_PYJW01000163.1 Protein Homology CDS 98312 99721 . + 0 ID=cds-WP_001271699.1;Parent=gene-C9E95_RS19215;Dbxref=GenBank:WP_001271699.1;Name=WP_001271699.1;Ontology_term=GO:0006542,GO:0008152,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=C9E95_RS19215;product=glutamate--ammonia ligase;protein_id=WP_001271699.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 99996 101045 . + . ID=gene-C9E95_RS19225;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=C9E95_RS19225;old_locus_tag=C9E95_19695 NZ_PYJW01000163.1 Protein Homology CDS 99996 101045 . + 0 ID=cds-WP_000146190.1;Parent=gene-C9E95_RS19225;Dbxref=GenBank:WP_000146190.1;Name=WP_000146190.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462886.1;locus_tag=C9E95_RS19225;product=nitrogen regulation protein NR(II);protein_id=WP_000146190.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 101054 102463 . + . ID=gene-C9E95_RS19230;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=C9E95_RS19230;old_locus_tag=C9E95_19700 NZ_PYJW01000163.1 Protein Homology CDS 101054 102463 . + 0 ID=cds-WP_001188782.1;Parent=gene-C9E95_RS19230;Dbxref=GenBank:WP_001188782.1;Name=WP_001188782.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=C9E95_RS19230;product=nitrogen regulation protein NR(I);protein_id=WP_001188782.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 102576 102686 . + . ID=gene-C9E95_RS19235;Name=C9E95_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19235;old_locus_tag=C9E95_19705 NZ_PYJW01000163.1 Protein Homology CDS 102576 102686 . + 0 ID=cds-WP_001578131.1;Parent=gene-C9E95_RS19235;Dbxref=GenBank:WP_001578131.1;Name=WP_001578131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=C9E95_RS19235;product=YshB family small membrane protein;protein_id=WP_001578131.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 102776 104149 . - . ID=gene-C9E95_RS19240;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=C9E95_RS19240;old_locus_tag=C9E95_19710 NZ_PYJW01000163.1 Protein Homology CDS 102776 104149 . - 0 ID=cds-WP_000003528.1;Parent=gene-C9E95_RS19240;Dbxref=GenBank:WP_000003528.1;Name=WP_000003528.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462884.1;locus_tag=C9E95_RS19240;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_000003528.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 104338 104853 . - . ID=gene-C9E95_RS19245;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=C9E95_RS19245;old_locus_tag=C9E95_19715 NZ_PYJW01000163.1 Protein Homology CDS 104338 104853 . - 0 ID=cds-WP_000743296.1;Parent=gene-C9E95_RS19245;Dbxref=GenBank:WP_000743296.1;Name=WP_000743296.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462883.1;locus_tag=C9E95_RS19245;product=Der GTPase-activating protein YihI;protein_id=WP_000743296.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 104972 105196 . - . ID=gene-C9E95_RS19250;Name=C9E95_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19250;old_locus_tag=C9E95_19720 NZ_PYJW01000163.1 Protein Homology CDS 104972 105196 . - 0 ID=cds-WP_001541209.1;Parent=gene-C9E95_RS19250;Dbxref=GenBank:WP_001541209.1;Name=WP_001541209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462882.1;locus_tag=C9E95_RS19250;product=hypothetical protein;protein_id=WP_001541209.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 105436 106068 . + . ID=gene-C9E95_RS19255;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=C9E95_RS19255;old_locus_tag=C9E95_19725 NZ_PYJW01000163.1 Protein Homology CDS 105436 106068 . + 0 ID=cds-WP_000183327.1;Parent=gene-C9E95_RS19255;Dbxref=GenBank:WP_000183327.1;Name=WP_000183327.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462881.1;locus_tag=C9E95_RS19255;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_000183327.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 106403 109189 . - . ID=gene-C9E95_RS19265;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=C9E95_RS19265;old_locus_tag=C9E95_19735 NZ_PYJW01000163.1 Protein Homology CDS 106403 109189 . - 0 ID=cds-WP_000249960.1;Parent=gene-C9E95_RS19265;Dbxref=GenBank:WP_000249960.1;Name=WP_000249960.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462879.1;locus_tag=C9E95_RS19265;product=DNA polymerase I;protein_id=WP_000249960.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 109577 110485 . + . ID=gene-C9E95_RS19275;Name=C9E95_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19275;old_locus_tag=C9E95_19745 NZ_PYJW01000163.1 Protein Homology CDS 109577 110485 . + 0 ID=cds-WP_000196902.1;Parent=gene-C9E95_RS19275;Dbxref=GenBank:WP_000196902.1;Name=WP_000196902.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462878.1;locus_tag=C9E95_RS19275;product=acyltransferase;protein_id=WP_000196902.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 110498 111121 . - . ID=gene-C9E95_RS19280;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=C9E95_RS19280;old_locus_tag=C9E95_19750 NZ_PYJW01000163.1 Protein Homology CDS 110498 111121 . - 0 ID=cds-WP_000725364.1;Parent=gene-C9E95_RS19280;Dbxref=GenBank:WP_000725364.1;Name=WP_000725364.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462877.1;locus_tag=C9E95_RS19280;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725364.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 111138 112124 . - . ID=gene-C9E95_RS19285;Name=C9E95_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19285;old_locus_tag=C9E95_19755 NZ_PYJW01000163.1 Protein Homology CDS 111138 112124 . - 0 ID=cds-WP_000999264.1;Parent=gene-C9E95_RS19285;Dbxref=GenBank:WP_000999264.1;Name=WP_000999264.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462876.1;locus_tag=C9E95_RS19285;product=serine/threonine protein kinase;protein_id=WP_000999264.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 112201 112470 . - . ID=gene-C9E95_RS19290;Name=C9E95_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19290;old_locus_tag=C9E95_19760 NZ_PYJW01000163.1 Protein Homology CDS 112201 112470 . - 0 ID=cds-WP_000649858.1;Parent=gene-C9E95_RS19290;Dbxref=GenBank:WP_000649858.1;Name=WP_000649858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=C9E95_RS19290;product=YihD family protein;protein_id=WP_000649858.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 112540 113124 . + . ID=gene-C9E95_RS19295;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=C9E95_RS19295;old_locus_tag=C9E95_19765 NZ_PYJW01000163.1 Protein Homology CDS 112540 113124 . + 0 ID=cds-WP_001046894.1;Parent=gene-C9E95_RS19295;Dbxref=GenBank:WP_001046894.1;Name=WP_001046894.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462874.1;locus_tag=C9E95_RS19295;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_001046894.1;transl_table=11 NZ_PYJW01000163.1 RefSeq gene 113121 113636 . + . ID=gene-C9E95_RS19300;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=C9E95_RS19300;old_locus_tag=C9E95_19770 NZ_PYJW01000163.1 Protein Homology CDS 113121 113636 . + 0 ID=cds-WP_023994502.1;Parent=gene-C9E95_RS19300;Dbxref=GenBank:WP_023994502.1;Name=WP_023994502.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462873.1;locus_tag=C9E95_RS19300;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_023994502.1;transl_table=11 ##sequence-region NZ_PYJW01000097.1 1 34748 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000097.1 RefSeq region 1 34748 . + . ID=NZ_PYJW01000097.1:1..34748;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000097.1 RefSeq gene 372 1004 . + . ID=gene-C9E95_RS10470;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=C9E95_RS10470;old_locus_tag=C9E95_10720 NZ_PYJW01000097.1 Protein Homology CDS 372 1004 . + 0 ID=cds-WP_000801273.1;Parent=gene-C9E95_RS10470;Dbxref=GenBank:WP_000801273.1;Name=WP_000801273.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459544.1;locus_tag=C9E95_RS10470;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WP_000801273.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 1050 1568 . - . ID=gene-C9E95_RS10475;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=C9E95_RS10475;old_locus_tag=C9E95_10725 NZ_PYJW01000097.1 Protein Homology CDS 1050 1568 . - 0 ID=cds-WP_000577507.1;Parent=gene-C9E95_RS10475;Dbxref=GenBank:WP_000577507.1;Name=WP_000577507.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459543.1;locus_tag=C9E95_RS10475;product=fimbria assembly protein;protein_id=WP_000577507.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 1578 2585 . - . ID=gene-C9E95_RS10480;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=C9E95_RS10480;old_locus_tag=C9E95_10730 NZ_PYJW01000097.1 Protein Homology CDS 1578 2585 . - 0 ID=cds-WP_080204029.1;Parent=gene-C9E95_RS10480;Dbxref=GenBank:WP_080204029.1;Name=WP_080204029.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459542.1;locus_tag=C9E95_RS10480;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_080204029.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 2600 5212 . - . ID=gene-C9E95_RS10485;Name=C9E95_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10485;old_locus_tag=C9E95_10735 NZ_PYJW01000097.1 Protein Homology CDS 2600 5212 . - 0 ID=cds-WP_080204030.1;Parent=gene-C9E95_RS10485;Dbxref=GenBank:WP_080204030.1;Name=WP_080204030.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459541.1;locus_tag=C9E95_RS10485;product=fimbrial biogenesis usher protein;protein_id=WP_080204030.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 5243 5935 . - . ID=gene-C9E95_RS10490;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=C9E95_RS10490;old_locus_tag=C9E95_10740 NZ_PYJW01000097.1 Protein Homology CDS 5243 5935 . - 0 ID=cds-WP_080204033.1;Parent=gene-C9E95_RS10490;Dbxref=GenBank:WP_080204033.1;Name=WP_080204033.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459540.1;locus_tag=C9E95_RS10490;product=type 1 fimbria chaperone FimC;protein_id=WP_080204033.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 5979 6512 . - . ID=gene-C9E95_RS10495;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=C9E95_RS10495;old_locus_tag=C9E95_10745 NZ_PYJW01000097.1 Protein Homology CDS 5979 6512 . - 0 ID=cds-WP_000619618.1;Parent=gene-C9E95_RS10495;Dbxref=GenBank:WP_000619618.1;Name=WP_000619618.1;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459539.1;locus_tag=C9E95_RS10495;product=type 1 fimbrial protein subunit FimI;protein_id=WP_000619618.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 6587 7144 . - . ID=gene-C9E95_RS10500;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=C9E95_RS10500;old_locus_tag=C9E95_10750 NZ_PYJW01000097.1 Protein Homology CDS 6587 7144 . - 0 ID=cds-WP_000681031.1;Parent=gene-C9E95_RS10500;Dbxref=GenBank:WP_000681031.1;Name=WP_000681031.1;gbkey=CDS;gene=fimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459538.3;locus_tag=C9E95_RS10500;product=type 1 fimbrial protein subunit FimA;protein_id=WP_000681031.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 7691 8557 . + . ID=gene-C9E95_RS10510;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=C9E95_RS10510;old_locus_tag=C9E95_10760 NZ_PYJW01000097.1 Protein Homology CDS 7691 8557 . + 0 ID=cds-WP_000729165.1;Parent=gene-C9E95_RS10510;Dbxref=GenBank:WP_000729165.1;Name=WP_000729165.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459537.1;locus_tag=C9E95_RS10510;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_000729165.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 8559 8771 . + . ID=gene-C9E95_RS10515;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=C9E95_RS10515;old_locus_tag=C9E95_10765 NZ_PYJW01000097.1 Protein Homology CDS 8559 8771 . + 0 ID=cds-WP_000190281.1;Parent=gene-C9E95_RS10515;Dbxref=GenBank:WP_000190281.1;Name=WP_000190281.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459536.1;locus_tag=C9E95_RS10515;product=ribosome-associated protein YbcJ;protein_id=WP_000190281.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 8898 9443 . + . ID=gene-C9E95_RS10520;Name=C9E95_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10520;old_locus_tag=C9E95_10770 NZ_PYJW01000097.1 Protein Homology CDS 8898 9443 . + 0 ID=cds-WP_001143571.1;Parent=gene-C9E95_RS10520;Dbxref=GenBank:WP_001143571.1;Name=WP_001143571.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459535.1;locus_tag=C9E95_RS10520;product=metal-dependent hydrolase;protein_id=WP_001143571.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 9436 9873 . + . ID=gene-C9E95_RS10525;Name=C9E95_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10525;old_locus_tag=C9E95_10775 NZ_PYJW01000097.1 Protein Homology CDS 9436 9873 . + 0 ID=cds-WP_001038580.1;Parent=gene-C9E95_RS10525;Dbxref=GenBank:WP_001038580.1;Name=WP_001038580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459534.1;locus_tag=C9E95_RS10525;product=STM0539 family protein;protein_id=WP_001038580.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 9870 10694 . + . ID=gene-C9E95_RS10530;Name=C9E95_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10530;old_locus_tag=C9E95_10780 NZ_PYJW01000097.1 Protein Homology CDS 9870 10694 . + 0 ID=cds-WP_080204031.1;Parent=gene-C9E95_RS10530;Dbxref=GenBank:WP_080204031.1;Name=WP_080204031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459533.1;locus_tag=C9E95_RS10530;product=DUF2145 domain-containing protein;protein_id=WP_080204031.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 10738 12123 . - . ID=gene-C9E95_RS10535;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=C9E95_RS10535;old_locus_tag=C9E95_10785 NZ_PYJW01000097.1 Protein Homology CDS 10738 12123 . - 0 ID=cds-WP_000912376.1;Parent=gene-C9E95_RS10535;Dbxref=GenBank:WP_000912376.1;Name=WP_000912376.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=C9E95_RS10535;product=cysteine--tRNA ligase;protein_id=WP_000912376.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 12296 12790 . + . ID=gene-C9E95_RS10540;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=C9E95_RS10540;old_locus_tag=C9E95_10790 NZ_PYJW01000097.1 Protein Homology CDS 12296 12790 . + 0 ID=cds-WP_000255991.1;Parent=gene-C9E95_RS10540;Dbxref=GenBank:WP_000255991.1;Name=WP_000255991.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=C9E95_RS10540;product=peptidylprolyl isomerase B;protein_id=WP_000255991.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 12793 13515 . + . ID=gene-C9E95_RS10545;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=C9E95_RS10545;old_locus_tag=C9E95_10795 NZ_PYJW01000097.1 Protein Homology CDS 12793 13515 . + 0 ID=cds-WP_135369841.1;Parent=gene-C9E95_RS10545;Dbxref=GenBank:WP_135369841.1;Name=WP_135369841.1;Ontology_term=GO:0009245,GO:0008758,GO:0016462,GO:0005737;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||IEA;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459530.1;locus_tag=C9E95_RS10545;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_135369841.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 13633 14142 . + . ID=gene-C9E95_RS10550;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=C9E95_RS10550;old_locus_tag=C9E95_10805 NZ_PYJW01000097.1 Protein Homology CDS 13633 14142 . + 0 ID=cds-WP_000098736.1;Parent=gene-C9E95_RS10550;Dbxref=GenBank:WP_000098736.1;Name=WP_000098736.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459529.1;locus_tag=C9E95_RS10550;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_000098736.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 14139 15206 . + . ID=gene-C9E95_RS10555;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=C9E95_RS10555;old_locus_tag=C9E95_10810 NZ_PYJW01000097.1 Protein Homology CDS 14139 15206 . + 0 ID=cds-WP_000815603.1;Parent=gene-C9E95_RS10555;Dbxref=GenBank:WP_000815603.1;Name=WP_000815603.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459528.1;locus_tag=C9E95_RS10555;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_000815603.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 15302 16387 . + . ID=gene-C9E95_RS10560;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=C9E95_RS10560;old_locus_tag=C9E95_10815 NZ_PYJW01000097.1 Protein Homology CDS 15302 16387 . + 0 ID=cds-WP_135369842.1;Parent=gene-C9E95_RS10560;Dbxref=GenBank:WP_135369842.1;Name=WP_135369842.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000997743.1;locus_tag=C9E95_RS10560;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_135369842.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 16416 17075 . - . ID=gene-C9E95_RS10565;Name=C9E95_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10565;old_locus_tag=C9E95_10820 NZ_PYJW01000097.1 Protein Homology CDS 16416 17075 . - 0 ID=cds-WP_000342247.1;Parent=gene-C9E95_RS10565;Dbxref=GenBank:WP_000342247.1;Name=WP_000342247.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459507.1;locus_tag=C9E95_RS10565;product=methionine ABC transporter permease;protein_id=WP_000342247.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 17068 18084 . - . ID=gene-C9E95_RS10570;Name=sfbB;gbkey=Gene;gene=sfbB;gene_biotype=protein_coding;locus_tag=C9E95_RS10570;old_locus_tag=C9E95_10825 NZ_PYJW01000097.1 Protein Homology CDS 17068 18084 . - 0 ID=cds-WP_000569660.1;Parent=gene-C9E95_RS10570;Dbxref=GenBank:WP_000569660.1;Name=WP_000569660.1;gbkey=CDS;gene=sfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459506.1;locus_tag=C9E95_RS10570;product=virulence-associated ABC transporter ATP-binding protein SfbB;protein_id=WP_000569660.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 18121 18951 . - . ID=gene-C9E95_RS10575;Name=C9E95_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10575;old_locus_tag=C9E95_10830 NZ_PYJW01000097.1 Protein Homology CDS 18121 18951 . - 0 ID=cds-WP_079950537.1;Parent=gene-C9E95_RS10575;Dbxref=GenBank:WP_079950537.1;Name=WP_079950537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459505.1;locus_tag=C9E95_RS10575;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_079950537.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 19208 20341 . - . ID=gene-C9E95_RS10580;Name=C9E95_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10580;old_locus_tag=C9E95_10835 NZ_PYJW01000097.1 Protein Homology CDS 19208 20341 . - 0 ID=cds-WP_000152869.1;Parent=gene-C9E95_RS10580;Dbxref=GenBank:WP_000152869.1;Name=WP_000152869.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459504.1;locus_tag=C9E95_RS10580;product=porin;protein_id=WP_000152869.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 20527 22941 . - . ID=gene-C9E95_RS10585;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=C9E95_RS10585;old_locus_tag=C9E95_10840 NZ_PYJW01000097.1 Protein Homology CDS 20527 22941 . - 0 ID=cds-WP_135369843.1;Parent=gene-C9E95_RS10585;Dbxref=GenBank:WP_135369843.1;Name=WP_135369843.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=C9E95_RS10585;product=putative ABC transporter permease subunit YbbP;protein_id=WP_135369843.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 22938 23624 . - . ID=gene-C9E95_RS10590;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=C9E95_RS10590;old_locus_tag=C9E95_10845 NZ_PYJW01000097.1 Protein Homology CDS 22938 23624 . - 0 ID=cds-WP_079902554.1;Parent=gene-C9E95_RS10590;Dbxref=GenBank:WP_079902554.1;Name=WP_079902554.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459502.1;locus_tag=C9E95_RS10590;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_079902554.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 23595 24209 . + . ID=gene-C9E95_RS10595;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=C9E95_RS10595;old_locus_tag=C9E95_10850 NZ_PYJW01000097.1 Protein Homology CDS 23595 24209 . + 0 ID=cds-WP_001010574.1;Parent=gene-C9E95_RS10595;Dbxref=GenBank:WP_001010574.1;Name=WP_001010574.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459501.1;locus_tag=C9E95_RS10595;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_001010574.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 24364 25134 . + . ID=gene-C9E95_RS10600;Name=C9E95_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10600;old_locus_tag=C9E95_10855 NZ_PYJW01000097.1 Protein Homology CDS 24364 25134 . + 0 ID=cds-WP_058331291.1;Parent=gene-C9E95_RS10600;Dbxref=GenBank:WP_058331291.1;Name=WP_058331291.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459500.1;locus_tag=C9E95_RS10600;product=SDR family oxidoreductase;protein_id=WP_058331291.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 25194 26048 . + . ID=gene-C9E95_RS10605;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=C9E95_RS10605;old_locus_tag=C9E95_10860 NZ_PYJW01000097.1 Protein Homology CDS 25194 26048 . + 0 ID=cds-WP_000116060.1;Parent=gene-C9E95_RS10605;Dbxref=GenBank:WP_000116060.1;Name=WP_000116060.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459499.1;locus_tag=C9E95_RS10605;product=chaperedoxin;protein_id=WP_000116060.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 26134 26913 . - . ID=gene-C9E95_RS10610;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=C9E95_RS10610;old_locus_tag=C9E95_10865 NZ_PYJW01000097.1 Protein Homology CDS 26134 26913 . - 0 ID=cds-WP_001002130.1;Parent=gene-C9E95_RS10610;Dbxref=GenBank:WP_001002130.1;Name=WP_001002130.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459498.1;locus_tag=C9E95_RS10610;product=iron efflux ABC transporter permease subunit FetB;protein_id=WP_001002130.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 26900 27577 . - . ID=gene-C9E95_RS10615;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=C9E95_RS10615;old_locus_tag=C9E95_10870 NZ_PYJW01000097.1 Protein Homology CDS 26900 27577 . - 0 ID=cds-WP_080230328.1;Parent=gene-C9E95_RS10615;Dbxref=GenBank:WP_080230328.1;Name=WP_080230328.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459497.1;locus_tag=C9E95_RS10615;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=WP_080230328.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 27724 28641 . + . ID=gene-C9E95_RS10620;Name=C9E95_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10620;old_locus_tag=C9E95_10875 NZ_PYJW01000097.1 Protein Homology CDS 27724 28641 . + 0 ID=cds-WP_000906146.1;Parent=gene-C9E95_RS10620;Dbxref=GenBank:WP_000906146.1;Name=WP_000906146.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459496.1;locus_tag=C9E95_RS10620;product=SPFH domain-containing protein;protein_id=WP_000906146.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 28638 29090 . + . ID=gene-C9E95_RS10625;Name=C9E95_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10625;old_locus_tag=C9E95_10880 NZ_PYJW01000097.1 Protein Homology CDS 28638 29090 . + 0 ID=cds-WP_000561177.1;Parent=gene-C9E95_RS10625;Dbxref=GenBank:WP_000561177.1;Name=WP_000561177.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459495.1;locus_tag=C9E95_RS10625;product=NfeD family protein;protein_id=WP_000561177.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 29091 29507 . - . ID=gene-C9E95_RS10630;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=C9E95_RS10630;old_locus_tag=C9E95_10885 NZ_PYJW01000097.1 Protein Homology CDS 29091 29507 . - 0 ID=cds-WP_001026760.1;Parent=gene-C9E95_RS10630;Dbxref=GenBank:WP_001026760.1;Name=WP_001026760.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459494.1;locus_tag=C9E95_RS10630;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_001026760.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 29617 32118 . + . ID=gene-C9E95_RS10635;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=C9E95_RS10635;old_locus_tag=C9E95_10890 NZ_PYJW01000097.1 Protein Homology CDS 29617 32118 . + 0 ID=cds-WP_023993890.1;Parent=gene-C9E95_RS10635;Dbxref=GenBank:WP_023993890.1;Name=WP_023993890.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459493.1;locus_tag=C9E95_RS10635;product=copper-exporting P-type ATPase CopA;protein_id=WP_023993890.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 32272 33099 . + . ID=gene-C9E95_RS10640;Name=C9E95_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10640;old_locus_tag=C9E95_10895 NZ_PYJW01000097.1 Protein Homology CDS 32272 33099 . + 0 ID=cds-WP_001523411.1;Parent=gene-C9E95_RS10640;Dbxref=GenBank:WP_001523411.1;Name=WP_001523411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459492.1;locus_tag=C9E95_RS10640;product=lysozyme inhibitor LprI family protein;protein_id=WP_001523411.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 33185 33979 . + . ID=gene-C9E95_RS10645;Name=C9E95_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10645;old_locus_tag=C9E95_10900 NZ_PYJW01000097.1 Protein Homology CDS 33185 33979 . + 0 ID=cds-WP_000421861.1;Parent=gene-C9E95_RS10645;Dbxref=GenBank:WP_000421861.1;Name=WP_000421861.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459491.1;locus_tag=C9E95_RS10645;product=TraB/GumN family protein;protein_id=WP_000421861.1;transl_table=11 NZ_PYJW01000097.1 RefSeq gene 34181 34660 . + . ID=gene-C9E95_RS10650;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=C9E95_RS10650;old_locus_tag=C9E95_10905 NZ_PYJW01000097.1 Protein Homology CDS 34181 34660 . + 0 ID=cds-WP_000186618.1;Parent=gene-C9E95_RS10650;Dbxref=GenBank:WP_000186618.1;Name=WP_000186618.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=C9E95_RS10650;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186618.1;transl_table=11 ##sequence-region NZ_PYJW01000116.1 1 34124 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000116.1 RefSeq region 1 34124 . + . ID=NZ_PYJW01000116.1:1..34124;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000116.1 RefSeq gene 1 229 . + . ID=gene-C9E95_RS23295;Name=C9E95_RS23295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23295;old_locus_tag=C9E95_12860;partial=true;start_range=.,1 NZ_PYJW01000116.1 GeneMarkS-2+ CDS 1 229 . + 1 ID=cds-WP_210115733.1;Parent=gene-C9E95_RS23295;Dbxref=GenBank:WP_210115733.1;Name=WP_210115733.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS23295;partial=true;product=hypothetical protein;protein_id=WP_210115733.1;start_range=.,1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 770 1708 . + . ID=gene-C9E95_RS12545;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=C9E95_RS12545;old_locus_tag=C9E95_12870 NZ_PYJW01000116.1 Protein Homology CDS 770 1708 . + 0 ID=cds-WP_001534138.1;Parent=gene-C9E95_RS12545;Dbxref=GenBank:WP_001534138.1;Name=WP_001534138.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462159.1;locus_tag=C9E95_RS12545;product=transcriptional regulator TdcA;protein_id=WP_001534138.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 1806 2795 . + . ID=gene-C9E95_RS12550;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=C9E95_RS12550;old_locus_tag=C9E95_12875 NZ_PYJW01000116.1 Protein Homology CDS 1806 2795 . + 0 ID=cds-WP_000548366.1;Parent=gene-C9E95_RS12550;Dbxref=GenBank:WP_000548366.1;Name=WP_000548366.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462158.1;locus_tag=C9E95_RS12550;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_000548366.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 2816 4147 . + . ID=gene-C9E95_RS12555;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=C9E95_RS12555;old_locus_tag=C9E95_12880 NZ_PYJW01000116.1 Protein Homology CDS 2816 4147 . + 0 ID=cds-WP_000108129.1;Parent=gene-C9E95_RS12555;Dbxref=GenBank:WP_000108129.1;Name=WP_000108129.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=C9E95_RS12555;product=threonine/serine transporter TdcC;protein_id=WP_000108129.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 4214 5422 . + . ID=gene-C9E95_RS12560;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=C9E95_RS12560;old_locus_tag=C9E95_12885 NZ_PYJW01000116.1 Protein Homology CDS 4214 5422 . + 0 ID=cds-WP_023205496.1;Parent=gene-C9E95_RS12560;Dbxref=GenBank:WP_023205496.1;Name=WP_023205496.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462156.1;locus_tag=C9E95_RS12560;product=propionate kinase;protein_id=WP_023205496.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 5456 7750 . + . ID=gene-C9E95_RS12565;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=C9E95_RS12565;old_locus_tag=C9E95_12890 NZ_PYJW01000116.1 Protein Homology CDS 5456 7750 . + 0 ID=cds-WP_000867323.1;Parent=gene-C9E95_RS12565;Dbxref=GenBank:WP_000867323.1;Name=WP_000867323.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462155.1;locus_tag=C9E95_RS12565;product=formate C-acetyltransferase;protein_id=WP_000867323.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 7820 9184 . + . ID=gene-C9E95_RS12570;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;locus_tag=C9E95_RS12570;old_locus_tag=C9E95_12895 NZ_PYJW01000116.1 Protein Homology CDS 7820 9184 . + 0 ID=cds-WP_080090856.1;Parent=gene-C9E95_RS12570;Dbxref=GenBank:WP_080090856.1;Name=WP_080090856.1;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462154.1;locus_tag=C9E95_RS12570;product=L-serine ammonia-lyase;protein_id=WP_080090856.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 9499 10830 . + . ID=gene-C9E95_RS12575;Name=C9E95_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12575;old_locus_tag=C9E95_12900 NZ_PYJW01000116.1 Protein Homology CDS 9499 10830 . + 0 ID=cds-WP_000443187.1;Parent=gene-C9E95_RS12575;Dbxref=GenBank:WP_000443187.1;Name=WP_000443187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462153.1;locus_tag=C9E95_RS12575;product=amino acid permease;protein_id=WP_000443187.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 10856 12166 . + . ID=gene-C9E95_RS12580;Name=C9E95_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12580;old_locus_tag=C9E95_12905 NZ_PYJW01000116.1 Protein Homology CDS 10856 12166 . + 0 ID=cds-WP_000463071.1;Parent=gene-C9E95_RS12580;Dbxref=GenBank:WP_000463071.1;Name=WP_000463071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462152.1;locus_tag=C9E95_RS12580;product=serine dehydratase subunit alpha family protein;protein_id=WP_000463071.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 12279 12443 . - . ID=gene-C9E95_RS12585;Name=C9E95_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12585;old_locus_tag=C9E95_12910 NZ_PYJW01000116.1 Protein Homology CDS 12279 12443 . - 0 ID=cds-WP_000039324.1;Parent=gene-C9E95_RS12585;Dbxref=GenBank:WP_000039324.1;Name=WP_000039324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462151.1;locus_tag=C9E95_RS12585;product=hypothetical protein;protein_id=WP_000039324.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 12467 13168 . - . ID=gene-C9E95_RS12590;Name=C9E95_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12590;old_locus_tag=C9E95_12915 NZ_PYJW01000116.1 Protein Homology CDS 12467 13168 . - 0 ID=cds-WP_080203819.1;Parent=gene-C9E95_RS12590;Dbxref=GenBank:WP_080203819.1;Name=WP_080203819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462150.1;locus_tag=C9E95_RS12590;product=pirin family protein;protein_id=WP_080203819.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 13273 14169 . + . ID=gene-C9E95_RS12595;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=C9E95_RS12595;old_locus_tag=C9E95_12920 NZ_PYJW01000116.1 Protein Homology CDS 13273 14169 . + 0 ID=cds-WP_001041026.1;Parent=gene-C9E95_RS12595;Dbxref=GenBank:WP_001041026.1;Name=WP_001041026.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462149.1;locus_tag=C9E95_RS12595;product=DNA-binding transcriptional regulator YhaJ;protein_id=WP_001041026.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 14208 14573 . - . ID=gene-C9E95_RS12600;Name=C9E95_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12600;old_locus_tag=C9E95_12925 NZ_PYJW01000116.1 Protein Homology CDS 14208 14573 . - 0 ID=cds-WP_000384139.1;Parent=gene-C9E95_RS12600;Dbxref=GenBank:WP_000384139.1;Name=WP_000384139.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462148.1;locus_tag=C9E95_RS12600;product=DUF805 domain-containing protein;protein_id=WP_000384139.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 14697 15683 . - . ID=gene-C9E95_RS12605;Name=C9E95_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12605;old_locus_tag=C9E95_12930 NZ_PYJW01000116.1 Protein Homology CDS 14697 15683 . - 0 ID=cds-WP_000531159.1;Parent=gene-C9E95_RS12605;Dbxref=GenBank:WP_000531159.1;Name=WP_000531159.1;Ontology_term=GO:0004364,GO:0016491;gbkey=CDS;go_function=glutathione transferase activity|0004364||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462147.1;locus_tag=C9E95_RS12605;product=glutathione S-transferase family protein;protein_id=WP_000531159.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 15751 16143 . - . ID=gene-C9E95_RS12610;Name=C9E95_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12610;old_locus_tag=C9E95_12935 NZ_PYJW01000116.1 Protein Homology CDS 15751 16143 . - 0 ID=cds-WP_001592732.1;Parent=gene-C9E95_RS12610;Dbxref=GenBank:WP_001592732.1;Name=WP_001592732.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=C9E95_RS12610;product=DoxX family protein;protein_id=WP_001592732.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 16381 16680 . - . ID=gene-C9E95_RS12615;Name=C9E95_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12615;old_locus_tag=C9E95_12940 NZ_PYJW01000116.1 Protein Homology CDS 16381 16680 . - 0 ID=cds-WP_000095496.1;Parent=gene-C9E95_RS12615;Dbxref=GenBank:WP_000095496.1;Name=WP_000095496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462145.1;locus_tag=C9E95_RS12615;product=YqjK-like family protein;protein_id=WP_000095496.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 16677 17075 . - . ID=gene-C9E95_RS12620;Name=C9E95_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12620;old_locus_tag=C9E95_12945 NZ_PYJW01000116.1 Protein Homology CDS 16677 17075 . - 0 ID=cds-WP_000785626.1;Parent=gene-C9E95_RS12620;Dbxref=GenBank:WP_000785626.1;Name=WP_000785626.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462144.1;locus_tag=C9E95_RS12620;product=phage holin family protein;protein_id=WP_000785626.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 17078 17383 . - . ID=gene-C9E95_RS12625;Name=C9E95_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12625;old_locus_tag=C9E95_12950 NZ_PYJW01000116.1 Protein Homology CDS 17078 17383 . - 0 ID=cds-WP_000031219.1;Parent=gene-C9E95_RS12625;Dbxref=GenBank:WP_000031219.1;Name=WP_000031219.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462143.1;locus_tag=C9E95_RS12625;product=DUF883 family protein;protein_id=WP_000031219.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 17425 17793 . - . ID=gene-C9E95_RS12630;Name=C9E95_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12630;old_locus_tag=C9E95_12955 NZ_PYJW01000116.1 Protein Homology CDS 17425 17793 . - 0 ID=cds-WP_000877300.1;Parent=gene-C9E95_RS12630;Dbxref=GenBank:WP_000877300.1;Name=WP_000877300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462142.1;locus_tag=C9E95_RS12630;product=DUF1090 domain-containing protein;protein_id=WP_000877300.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 17938 18321 . - . ID=gene-C9E95_RS12635;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=C9E95_RS12635;old_locus_tag=C9E95_12960 NZ_PYJW01000116.1 Protein Homology CDS 17938 18321 . - 0 ID=cds-WP_000917516.1;Parent=gene-C9E95_RS12635;Dbxref=GenBank:WP_000917516.1;Name=WP_000917516.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462141.1;locus_tag=C9E95_RS12635;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_000917516.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 18325 18987 . - . ID=gene-C9E95_RS12640;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=C9E95_RS12640;old_locus_tag=C9E95_12965 NZ_PYJW01000116.1 Protein Homology CDS 18325 18987 . - 0 ID=cds-WP_000422143.1;Parent=gene-C9E95_RS12640;Dbxref=GenBank:WP_000422143.1;Name=WP_000422143.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462140.1;locus_tag=C9E95_RS12640;product=DedA family general envelope maintenance protein YqjA;protein_id=WP_000422143.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 19437 20681 . - . ID=gene-C9E95_RS12645;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=C9E95_RS12645;old_locus_tag=C9E95_12975 NZ_PYJW01000116.1 Protein Homology CDS 19437 20681 . - 0 ID=cds-WP_000235363.1;Parent=gene-C9E95_RS12645;Dbxref=GenBank:WP_000235363.1;Name=WP_000235363.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462139.1;locus_tag=C9E95_RS12645;product=serine/threonine transporter SstT;protein_id=WP_000235363.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 20936 21904 . - . ID=gene-C9E95_RS12650;Name=C9E95_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12650;old_locus_tag=C9E95_12980 NZ_PYJW01000116.1 Protein Homology CDS 20936 21904 . - 0 ID=cds-WP_001098833.1;Parent=gene-C9E95_RS12650;Dbxref=GenBank:WP_001098833.1;Name=WP_001098833.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462138.1;locus_tag=C9E95_RS12650;product=TerC family protein;protein_id=WP_001098833.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 22174 23172 . - . ID=gene-C9E95_RS12655;Name=C9E95_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12655;old_locus_tag=C9E95_12985 NZ_PYJW01000116.1 Protein Homology CDS 22174 23172 . - 0 ID=cds-WP_080203821.1;Parent=gene-C9E95_RS12655;Dbxref=GenBank:WP_080203821.1;Name=WP_080203821.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462137.1;locus_tag=C9E95_RS12655;product=Gfo/Idh/MocA family protein;protein_id=WP_080203821.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 23261 23953 . - . ID=gene-C9E95_RS12660;Name=C9E95_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12660;old_locus_tag=C9E95_12990 NZ_PYJW01000116.1 Protein Homology CDS 23261 23953 . - 0 ID=cds-WP_000951045.1;Parent=gene-C9E95_RS12660;Dbxref=GenBank:WP_000951045.1;Name=WP_000951045.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462136.1;locus_tag=C9E95_RS12660;product=SanA/YdcF family protein;protein_id=WP_000951045.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 24105 24602 . - . ID=gene-C9E95_RS12665;Name=C9E95_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12665;old_locus_tag=C9E95_12995 NZ_PYJW01000116.1 Protein Homology CDS 24105 24602 . - 0 ID=cds-WP_000202966.1;Parent=gene-C9E95_RS12665;Dbxref=GenBank:WP_000202966.1;Name=WP_000202966.1;Ontology_term=GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462135.1;locus_tag=C9E95_RS12665;product=M48 metallopeptidase family protein;protein_id=WP_000202966.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 24688 25824 . + . ID=gene-C9E95_RS12670;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=C9E95_RS12670;old_locus_tag=C9E95_13000 NZ_PYJW01000116.1 Protein Homology CDS 24688 25824 . + 0 ID=cds-WP_000019985.1;Parent=gene-C9E95_RS12670;Dbxref=GenBank:WP_000019985.1;Name=WP_000019985.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462134.1;locus_tag=C9E95_RS12670;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_000019985.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 25905 27923 . - . ID=gene-C9E95_RS12675;Name=C9E95_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12675;old_locus_tag=C9E95_13005 NZ_PYJW01000116.1 Protein Homology CDS 25905 27923 . - 0 ID=cds-WP_080203822.1;Parent=gene-C9E95_RS12675;Dbxref=GenBank:WP_080203822.1;Name=WP_080203822.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=C9E95_RS12675;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_080203822.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 28093 29472 . - . ID=gene-C9E95_RS12680;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=C9E95_RS12680;old_locus_tag=C9E95_13010 NZ_PYJW01000116.1 Protein Homology CDS 28093 29472 . - 0 ID=cds-WP_001520281.1;Parent=gene-C9E95_RS12680;Dbxref=GenBank:WP_001520281.1;Name=WP_001520281.1;Ontology_term=GO:0009447,GO:0030170,GO:0033094;gbkey=CDS;gene=ygjG;go_function=pyridoxal phosphate binding|0030170||IEA,putrescine--2-oxoglutarate transaminase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894971.1;locus_tag=C9E95_RS12680;product=putrescine aminotransferase;protein_id=WP_001520281.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 29902 31422 . + . ID=gene-C9E95_RS12685;Name=C9E95_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12685;old_locus_tag=C9E95_13020 NZ_PYJW01000116.1 Protein Homology CDS 29902 31422 . + 0 ID=cds-WP_080203823.1;Parent=gene-C9E95_RS12685;Dbxref=GenBank:WP_080203823.1;Name=WP_080203823.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462131.1;locus_tag=C9E95_RS12685;product=methyl-accepting chemotaxis protein;protein_id=WP_080203823.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 31810 33378 . + . ID=gene-C9E95_RS12690;Name=C9E95_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12690;old_locus_tag=C9E95_13025 NZ_PYJW01000116.1 Protein Homology CDS 31810 33378 . + 0 ID=cds-WP_000478462.1;Parent=gene-C9E95_RS12690;Dbxref=GenBank:WP_000478462.1;Name=WP_000478462.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462130.1;locus_tag=C9E95_RS12690;product=methyl-accepting chemotaxis protein;protein_id=WP_000478462.1;transl_table=11 NZ_PYJW01000116.1 RefSeq gene 33375 34022 . - . ID=gene-C9E95_RS12695;Name=C9E95_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12695;old_locus_tag=C9E95_13030 NZ_PYJW01000116.1 Protein Homology CDS 33375 34022 . - 0 ID=cds-WP_000983434.1;Parent=gene-C9E95_RS12695;Dbxref=GenBank:WP_000983434.1;Name=WP_000983434.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462129.1;locus_tag=C9E95_RS12695;product=PadR family transcriptional regulator;protein_id=WP_000983434.1;transl_table=11 ##sequence-region NZ_PYJW01000061.1 1 574 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000061.1 RefSeq region 1 574 . + . ID=NZ_PYJW01000061.1:1..574;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000061.1 RefSeq gene 1 218 . + . ID=gene-C9E95_RS23255;Name=C9E95_RS23255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23255;partial=true;start_range=.,1 NZ_PYJW01000061.1 GeneMarkS-2+ CDS 1 218 . + 2 ID=cds-WP_210115731.1;Parent=gene-C9E95_RS23255;Dbxref=GenBank:WP_210115731.1;Name=WP_210115731.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS23255;partial=true;product=hypothetical protein;protein_id=WP_210115731.1;start_range=.,1;transl_table=11 NZ_PYJW01000061.1 RefSeq gene 239 354 . - . ID=gene-C9E95_RS06290;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9E95_RS06290;old_locus_tag=C9E95_06450 NZ_PYJW01000061.1 cmsearch rRNA 239 354 . - . ID=rna-C9E95_RS06290;Parent=gene-C9E95_RS06290;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS06290;product=5S ribosomal RNA NZ_PYJW01000061.1 cmsearch exon 239 354 . - . ID=exon-C9E95_RS06290-1;Parent=rna-C9E95_RS06290;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS06290;product=5S ribosomal RNA ##sequence-region NZ_PYJW01000174.1 1 33847 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000174.1 RefSeq region 1 33847 . + . ID=NZ_PYJW01000174.1:1..33847;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000174.1 RefSeq gene 107 1108 . + . ID=gene-C9E95_RS20500;Name=C9E95_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20500;old_locus_tag=C9E95_20995 NZ_PYJW01000174.1 Protein Homology CDS 107 1108 . + 0 ID=cds-WP_001013447.1;Parent=gene-C9E95_RS20500;Dbxref=GenBank:WP_001013447.1;Name=WP_001013447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000676522.1;locus_tag=C9E95_RS20500;product=DUF1202 family protein;protein_id=WP_001013447.1;transl_table=11 NZ_PYJW01000174.1 RefSeq pseudogene 1197 2242 . - . ID=gene-C9E95_RS20505;Name=C9E95_RS20505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS20505;old_locus_tag=C9E95_21000;pseudo=true NZ_PYJW01000174.1 Protein Homology CDS 1197 2242 . - 0 ID=cds-C9E95_RS20505;Parent=gene-C9E95_RS20505;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=C9E95_RS20505;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 2385 3137 . - . ID=gene-C9E95_RS20510;Name=C9E95_RS20510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20510;old_locus_tag=C9E95_21005 NZ_PYJW01000174.1 Protein Homology CDS 2385 3137 . - 0 ID=cds-WP_023993527.1;Parent=gene-C9E95_RS20510;Dbxref=GenBank:WP_023993527.1;Name=WP_023993527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463184.1;locus_tag=C9E95_RS20510;product=non-specific acid phosphatase;protein_id=WP_023993527.1;transl_table=11 NZ_PYJW01000174.1 RefSeq pseudogene 3691 3768 . + . ID=gene-C9E95_RS20515;Name=C9E95_RS20515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS20515;old_locus_tag=C9E95_21010;partial=true;pseudo=true;start_range=.,3691 NZ_PYJW01000174.1 Protein Homology CDS 3691 3768 . + 0 ID=cds-C9E95_RS20515;Parent=gene-C9E95_RS20515;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003842122.1;locus_tag=C9E95_RS20515;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,3691;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 3848 3923 . - . ID=gene-C9E95_RS20520;Name=C9E95_RS20520;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS20520;old_locus_tag=C9E95_21015 NZ_PYJW01000174.1 tRNAscan-SE tRNA 3848 3923 . - . ID=rna-C9E95_RS20520;Parent=gene-C9E95_RS20520;anticodon=(pos:complement(3888..3890));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS20520;product=tRNA-Phe NZ_PYJW01000174.1 tRNAscan-SE exon 3848 3923 . - . ID=exon-C9E95_RS20520-1;Parent=rna-C9E95_RS20520;anticodon=(pos:complement(3888..3890));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS20520;product=tRNA-Phe NZ_PYJW01000174.1 RefSeq gene 4039 4614 . - . ID=gene-C9E95_RS20525;Name=C9E95_RS20525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20525;old_locus_tag=C9E95_21020 NZ_PYJW01000174.1 Protein Homology CDS 4039 4614 . - 0 ID=cds-WP_001188509.1;Parent=gene-C9E95_RS20525;Dbxref=GenBank:WP_001188509.1;Name=WP_001188509.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463186.1;locus_tag=C9E95_RS20525;product=transcriptional regulator;protein_id=WP_001188509.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 4651 6354 . - . ID=gene-C9E95_RS20530;Name=C9E95_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20530;old_locus_tag=C9E95_21025 NZ_PYJW01000174.1 Protein Homology CDS 4651 6354 . - 0 ID=cds-WP_000068885.1;Parent=gene-C9E95_RS20530;Dbxref=GenBank:WP_000068885.1;Name=WP_000068885.1;Ontology_term=GO:0017004,GO:0009055,GO:0030554,GO:0047134;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,adenyl nucleotide binding|0030554||IEA,protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463187.1;locus_tag=C9E95_RS20530;product=protein-disulfide reductase DsbD;protein_id=WP_000068885.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 6330 6677 . - . ID=gene-C9E95_RS20535;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=C9E95_RS20535;old_locus_tag=C9E95_21030 NZ_PYJW01000174.1 Protein Homology CDS 6330 6677 . - 0 ID=cds-WP_000887832.1;Parent=gene-C9E95_RS20535;Dbxref=GenBank:WP_000887832.1;Name=WP_000887832.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463188.1;locus_tag=C9E95_RS20535;product=divalent cation tolerance protein CutA;protein_id=WP_000887832.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 6798 8099 . - . ID=gene-C9E95_RS20540;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=C9E95_RS20540;old_locus_tag=C9E95_21035 NZ_PYJW01000174.1 Protein Homology CDS 6798 8099 . - 0 ID=cds-WP_000637595.1;Parent=gene-C9E95_RS20540;Dbxref=GenBank:WP_000637595.1;Name=WP_000637595.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463189.1;locus_tag=C9E95_RS20540;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WP_000637595.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 8214 9650 . - . ID=gene-C9E95_RS20545;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=C9E95_RS20545;old_locus_tag=C9E95_21040 NZ_PYJW01000174.1 Protein Homology CDS 8214 9650 . - 0 ID=cds-WP_000069440.1;Parent=gene-C9E95_RS20545;Dbxref=GenBank:WP_000069440.1;Name=WP_000069440.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463190.1;locus_tag=C9E95_RS20545;product=aspartate ammonia-lyase;protein_id=WP_000069440.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 9991 10467 . + . ID=gene-C9E95_RS20550;Name=C9E95_RS20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20550;old_locus_tag=C9E95_21045 NZ_PYJW01000174.1 Protein Homology CDS 9991 10467 . + 0 ID=cds-WP_001267291.1;Parent=gene-C9E95_RS20550;Dbxref=GenBank:WP_001267291.1;Name=WP_001267291.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313148.1;locus_tag=C9E95_RS20550;product=FxsA family protein;protein_id=WP_001267291.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 10526 11767 . - . ID=gene-C9E95_RS20555;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=C9E95_RS20555;old_locus_tag=C9E95_21050 NZ_PYJW01000174.1 Protein Homology CDS 10526 11767 . - 0 ID=cds-WP_001670701.1;Parent=gene-C9E95_RS20555;Dbxref=GenBank:WP_001670701.1;Name=WP_001670701.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463192.1;locus_tag=C9E95_RS20555;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_001670701.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 12043 12336 . + . ID=gene-C9E95_RS20560;Name=C9E95_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20560;old_locus_tag=C9E95_21055 NZ_PYJW01000174.1 Protein Homology CDS 12043 12336 . + 0 ID=cds-WP_000027827.1;Parent=gene-C9E95_RS20560;Dbxref=GenBank:WP_000027827.1;Name=WP_000027827.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=C9E95_RS20560;product=co-chaperone GroES;protein_id=WP_000027827.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 12380 14026 . + . ID=gene-C9E95_RS20565;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=C9E95_RS20565;old_locus_tag=C9E95_21060 NZ_PYJW01000174.1 Protein Homology CDS 12380 14026 . + 0 ID=cds-WP_000729126.1;Parent=gene-C9E95_RS20565;Dbxref=GenBank:WP_000729126.1;Name=WP_000729126.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=C9E95_RS20565;product=chaperonin GroEL;protein_id=WP_000729126.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 14261 14614 . + . ID=gene-C9E95_RS20570;Name=C9E95_RS20570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20570;old_locus_tag=C9E95_21065 NZ_PYJW01000174.1 Protein Homology CDS 14261 14614 . + 0 ID=cds-WP_000558210.1;Parent=gene-C9E95_RS20570;Dbxref=GenBank:WP_000558210.1;Name=WP_000558210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=C9E95_RS20570;product=DUF4156 domain-containing protein;protein_id=WP_000558210.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 14662 15519 . - . ID=gene-C9E95_RS20575;Name=C9E95_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20575;old_locus_tag=C9E95_21070 NZ_PYJW01000174.1 Protein Homology CDS 14662 15519 . - 0 ID=cds-WP_023245328.1;Parent=gene-C9E95_RS20575;Dbxref=GenBank:WP_023245328.1;Name=WP_023245328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463196.1;locus_tag=C9E95_RS20575;product=YjeJ family protein;protein_id=WP_023245328.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 15802 16830 . - . ID=gene-C9E95_RS20580;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=C9E95_RS20580;old_locus_tag=C9E95_21075 NZ_PYJW01000174.1 Protein Homology CDS 15802 16830 . - 0 ID=cds-WP_000940477.1;Parent=gene-C9E95_RS20580;Dbxref=GenBank:WP_000940477.1;Name=WP_000940477.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463197.1;locus_tag=C9E95_RS20580;product=EF-P beta-lysylation protein EpmB;protein_id=WP_000940477.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 16871 17437 . + . ID=gene-C9E95_RS20585;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=C9E95_RS20585;old_locus_tag=C9E95_21080 NZ_PYJW01000174.1 Protein Homology CDS 16871 17437 . + 0 ID=cds-WP_000257282.1;Parent=gene-C9E95_RS20585;Dbxref=GenBank:WP_000257282.1;Name=WP_000257282.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=C9E95_RS20585;product=elongation factor P;protein_id=WP_000257282.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 17498 17632 . + . ID=gene-C9E95_RS20590;Name=C9E95_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20590;old_locus_tag=C9E95_21085 NZ_PYJW01000174.1 Protein Homology CDS 17498 17632 . + 0 ID=cds-WP_001595192.1;Parent=gene-C9E95_RS20590;Dbxref=GenBank:WP_001595192.1;Name=WP_001595192.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=C9E95_RS20590;product=entericidin A/B family lipoprotein;protein_id=WP_001595192.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 17740 17886 . + . ID=gene-C9E95_RS20600;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=C9E95_RS20600;old_locus_tag=C9E95_21095 NZ_PYJW01000174.1 Protein Homology CDS 17740 17886 . + 0 ID=cds-WP_000239598.1;Parent=gene-C9E95_RS20600;Dbxref=GenBank:WP_000239598.1;Name=WP_000239598.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463200.1;locus_tag=C9E95_RS20600;product=lipoprotein toxin entericidin B;protein_id=WP_000239598.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 17917 18504 . - . ID=gene-C9E95_RS20605;Name=C9E95_RS20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20605;old_locus_tag=C9E95_21100 NZ_PYJW01000174.1 Protein Homology CDS 17917 18504 . - 0 ID=cds-WP_000912959.1;Parent=gene-C9E95_RS20605;Dbxref=GenBank:WP_000912959.1;Name=WP_000912959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463201.1;locus_tag=C9E95_RS20605;product=helix-turn-helix transcriptional regulator;protein_id=WP_000912959.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 18761 19078 . + . ID=gene-C9E95_RS20610;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=C9E95_RS20610;old_locus_tag=C9E95_21105 NZ_PYJW01000174.1 Protein Homology CDS 18761 19078 . + 0 ID=cds-WP_000118469.1;Parent=gene-C9E95_RS20610;Dbxref=GenBank:WP_000118469.1;Name=WP_000118469.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463202.1;locus_tag=C9E95_RS20610;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_000118469.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 19095 19628 . - . ID=gene-C9E95_RS20615;Name=C9E95_RS20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20615;old_locus_tag=C9E95_21110 NZ_PYJW01000174.1 Protein Homology CDS 19095 19628 . - 0 ID=cds-WP_001221669.1;Parent=gene-C9E95_RS20615;Dbxref=GenBank:WP_001221669.1;Name=WP_001221669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463203.1;locus_tag=C9E95_RS20615;product=lipocalin family protein;protein_id=WP_001221669.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 19740 20099 . - . ID=gene-C9E95_RS20620;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=C9E95_RS20620;old_locus_tag=C9E95_21115 NZ_PYJW01000174.1 Protein Homology CDS 19740 20099 . - 0 ID=cds-WP_000609650.1;Parent=gene-C9E95_RS20620;Dbxref=GenBank:WP_000609650.1;Name=WP_000609650.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463204.1;locus_tag=C9E95_RS20620;product=fumarate reductase subunit FrdD;protein_id=WP_000609650.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 20110 20505 . - . ID=gene-C9E95_RS20625;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=C9E95_RS20625;old_locus_tag=C9E95_21120 NZ_PYJW01000174.1 Protein Homology CDS 20110 20505 . - 0 ID=cds-WP_000208749.1;Parent=gene-C9E95_RS20625;Dbxref=GenBank:WP_000208749.1;Name=WP_000208749.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463205.1;locus_tag=C9E95_RS20625;product=fumarate reductase subunit FrdC;protein_id=WP_000208749.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 20516 21250 . - . ID=gene-C9E95_RS20630;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=C9E95_RS20630;old_locus_tag=C9E95_21125 NZ_PYJW01000174.1 Protein Homology CDS 20516 21250 . - 0 ID=cds-WP_000829509.1;Parent=gene-C9E95_RS20630;Dbxref=GenBank:WP_000829509.1;Name=WP_000829509.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=C9E95_RS20630;product=fumarate reductase iron-sulfur protein;protein_id=WP_000829509.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 21243 23033 . - . ID=gene-C9E95_RS20635;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=C9E95_RS20635;old_locus_tag=C9E95_21130 NZ_PYJW01000174.1 Protein Homology CDS 21243 23033 . - 0 ID=cds-WP_001192954.1;Parent=gene-C9E95_RS20635;Dbxref=GenBank:WP_001192954.1;Name=WP_001192954.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463207.1;locus_tag=C9E95_RS20635;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_001192954.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 23356 24333 . + . ID=gene-C9E95_RS20640;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=C9E95_RS20640;old_locus_tag=C9E95_21135 NZ_PYJW01000174.1 Protein Homology CDS 23356 24333 . + 0 ID=cds-WP_000004794.1;Parent=gene-C9E95_RS20640;Dbxref=GenBank:WP_000004794.1;Name=WP_000004794.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=C9E95_RS20640;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_000004794.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 24559 26061 . + . ID=gene-C9E95_RS20645;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=C9E95_RS20645;old_locus_tag=C9E95_21140 NZ_PYJW01000174.1 Protein Homology CDS 24559 26061 . + 0 ID=cds-WP_000149876.1;Parent=gene-C9E95_RS20645;Dbxref=GenBank:WP_000149876.1;Name=WP_000149876.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463209.1;locus_tag=C9E95_RS20645;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_000149876.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 26113 26427 . + . ID=gene-C9E95_RS20650;Name=C9E95_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20650;old_locus_tag=C9E95_21145 NZ_PYJW01000174.1 Protein Homology CDS 26113 26427 . + 0 ID=cds-WP_000074657.1;Parent=gene-C9E95_RS20650;Dbxref=GenBank:WP_000074657.1;Name=WP_000074657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463210.1;locus_tag=C9E95_RS20650;product=YjeO family protein;protein_id=WP_000074657.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 26494 29820 . - . ID=gene-C9E95_RS20655;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=C9E95_RS20655;old_locus_tag=C9E95_21150 NZ_PYJW01000174.1 Protein Homology CDS 26494 29820 . - 0 ID=cds-WP_001236755.1;Parent=gene-C9E95_RS20655;Dbxref=GenBank:WP_001236755.1;Name=WP_001236755.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463211.1;locus_tag=C9E95_RS20655;product=miniconductance mechanosensitive channel MscM;protein_id=WP_001236755.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 29839 30807 . - . ID=gene-C9E95_RS20660;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=C9E95_RS20660;old_locus_tag=C9E95_21155 NZ_PYJW01000174.1 Protein Homology CDS 29839 30807 . - 0 ID=cds-WP_080203658.1;Parent=gene-C9E95_RS20660;Dbxref=GenBank:WP_080203658.1;Name=WP_080203658.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463212.1;locus_tag=C9E95_RS20660;product=archaetidylserine decarboxylase;protein_id=WP_080203658.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 30899 31951 . - . ID=gene-C9E95_RS20665;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=C9E95_RS20665;old_locus_tag=C9E95_21160 NZ_PYJW01000174.1 Protein Homology CDS 30899 31951 . - 0 ID=cds-WP_000041945.1;Parent=gene-C9E95_RS20665;Dbxref=GenBank:WP_000041945.1;Name=WP_000041945.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=C9E95_RS20665;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_000041945.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 32058 32603 . + . ID=gene-C9E95_RS20670;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=C9E95_RS20670;old_locus_tag=C9E95_21165 NZ_PYJW01000174.1 Protein Homology CDS 32058 32603 . + 0 ID=cds-WP_001271546.1;Parent=gene-C9E95_RS20670;Dbxref=GenBank:WP_001271546.1;Name=WP_001271546.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=C9E95_RS20670;product=oligoribonuclease;protein_id=WP_001271546.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 32665 33405 . - . ID=gene-C9E95_RS20675;Name=C9E95_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20675;old_locus_tag=C9E95_21170 NZ_PYJW01000174.1 Protein Homology CDS 32665 33405 . - 0 ID=cds-WP_000727897.1;Parent=gene-C9E95_RS20675;Dbxref=GenBank:WP_000727897.1;Name=WP_000727897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463215.3;locus_tag=C9E95_RS20675;product=arginine ABC transporter substrate-binding protein;protein_id=WP_000727897.1;transl_table=11 NZ_PYJW01000174.1 RefSeq gene 33681 33756 . + . ID=gene-C9E95_RS20680;Name=C9E95_RS20680;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS20680;old_locus_tag=C9E95_21175 NZ_PYJW01000174.1 tRNAscan-SE tRNA 33681 33756 . + . ID=rna-C9E95_RS20680;Parent=gene-C9E95_RS20680;anticodon=(pos:33714..33716);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS20680;product=tRNA-Gly NZ_PYJW01000174.1 tRNAscan-SE exon 33681 33756 . + . ID=exon-C9E95_RS20680-1;Parent=rna-C9E95_RS20680;anticodon=(pos:33714..33716);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS20680;product=tRNA-Gly ##sequence-region NZ_PYJW01000105.1 1 33721 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000105.1 RefSeq region 1 33721 . + . ID=NZ_PYJW01000105.1:1..33721;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000105.1 RefSeq pseudogene 286 571 . - . ID=gene-C9E95_RS23480;Name=C9E95_RS23480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23480;old_locus_tag=C9E95_11490;partial=true;pseudo=true;start_range=.,286 NZ_PYJW01000105.1 Protein Homology CDS 286 571 . - 0 ID=cds-C9E95_RS23480;Parent=gene-C9E95_RS23480;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_046881606.1;locus_tag=C9E95_RS23480;partial=true;product=IS4-like element ISEc60 family transposase;pseudo=true;start_range=.,286;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 674 1057 . - . ID=gene-C9E95_RS11205;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=C9E95_RS11205;old_locus_tag=C9E95_11495 NZ_PYJW01000105.1 Protein Homology CDS 674 1057 . - 0 ID=cds-WP_000259648.1;Parent=gene-C9E95_RS11205;Dbxref=GenBank:WP_000259648.1;Name=WP_000259648.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459830.1;locus_tag=C9E95_RS11205;product=biofilm formation regulator BssR;protein_id=WP_000259648.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 1288 2613 . + . ID=gene-C9E95_RS11210;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=C9E95_RS11210;old_locus_tag=C9E95_11500 NZ_PYJW01000105.1 Protein Homology CDS 1288 2613 . + 0 ID=cds-WP_000073314.1;Parent=gene-C9E95_RS11210;Dbxref=GenBank:WP_000073314.1;Name=WP_000073314.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459829.1;locus_tag=C9E95_RS11210;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_000073314.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 2704 3615 . - . ID=gene-C9E95_RS11215;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=C9E95_RS11215;old_locus_tag=C9E95_11505 NZ_PYJW01000105.1 Protein Homology CDS 2704 3615 . - 0 ID=cds-WP_001236024.1;Parent=gene-C9E95_RS11215;Dbxref=GenBank:WP_001236024.1;Name=WP_001236024.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459828.1;locus_tag=C9E95_RS11215;product=glutathione ABC transporter permease GsiD;protein_id=WP_001236024.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 3618 4538 . - . ID=gene-C9E95_RS11220;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=C9E95_RS11220;old_locus_tag=C9E95_11510 NZ_PYJW01000105.1 Protein Homology CDS 3618 4538 . - 0 ID=cds-WP_000936066.1;Parent=gene-C9E95_RS11220;Dbxref=GenBank:WP_000936066.1;Name=WP_000936066.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459827.1;locus_tag=C9E95_RS11220;product=glutathione ABC transporter permease GsiC;protein_id=WP_000936066.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 4599 6137 . - . ID=gene-C9E95_RS11225;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=C9E95_RS11225;old_locus_tag=C9E95_11515 NZ_PYJW01000105.1 Protein Homology CDS 4599 6137 . - 0 ID=cds-WP_023993611.1;Parent=gene-C9E95_RS11225;Dbxref=GenBank:WP_023993611.1;Name=WP_023993611.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459826.1;locus_tag=C9E95_RS11225;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_023993611.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 6170 8041 . - . ID=gene-C9E95_RS11230;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=C9E95_RS11230;old_locus_tag=C9E95_11520 NZ_PYJW01000105.1 Protein Homology CDS 6170 8041 . - 0 ID=cds-WP_001120598.1;Parent=gene-C9E95_RS11230;Dbxref=GenBank:WP_001120598.1;Name=WP_001120598.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459825.1;locus_tag=C9E95_RS11230;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_001120598.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 8052 8993 . - . ID=gene-C9E95_RS11235;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=C9E95_RS11235;old_locus_tag=C9E95_11525 NZ_PYJW01000105.1 Protein Homology CDS 8052 8993 . - 0 ID=cds-WP_001030503.1;Parent=gene-C9E95_RS11235;Dbxref=GenBank:WP_001030503.1;Name=WP_001030503.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459824.1;locus_tag=C9E95_RS11235;product=beta-aspartyl-peptidase;protein_id=WP_001030503.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 9196 10431 . + . ID=gene-C9E95_RS11240;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=C9E95_RS11240;old_locus_tag=C9E95_11530 NZ_PYJW01000105.1 Protein Homology CDS 9196 10431 . + 0 ID=cds-WP_023993609.1;Parent=gene-C9E95_RS11240;Dbxref=GenBank:WP_023993609.1;Name=WP_023993609.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308932.1;locus_tag=C9E95_RS11240;product=molybdopterin molybdotransferase MoeA;protein_id=WP_023993609.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 10431 11180 . + . ID=gene-C9E95_RS11245;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=C9E95_RS11245;old_locus_tag=C9E95_11535 NZ_PYJW01000105.1 Protein Homology CDS 10431 11180 . + 0 ID=cds-WP_000829278.1;Parent=gene-C9E95_RS11245;Dbxref=GenBank:WP_000829278.1;Name=WP_000829278.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459822.1;locus_tag=C9E95_RS11245;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_000829278.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 11458 12357 . + . ID=gene-C9E95_RS11250;Name=C9E95_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11250;old_locus_tag=C9E95_11540 NZ_PYJW01000105.1 Protein Homology CDS 11458 12357 . + 0 ID=cds-WP_000576947.1;Parent=gene-C9E95_RS11250;Dbxref=GenBank:WP_000576947.1;Name=WP_000576947.1;Ontology_term=GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459821.1;locus_tag=C9E95_RS11250;product=glycyl-radical enzyme activating protein;protein_id=WP_000576947.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 12363 14795 . + . ID=gene-C9E95_RS11255;Name=C9E95_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11255;old_locus_tag=C9E95_11545 NZ_PYJW01000105.1 Protein Homology CDS 12363 14795 . + 0 ID=cds-WP_023993608.1;Parent=gene-C9E95_RS11255;Dbxref=GenBank:WP_023993608.1;Name=WP_023993608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459820.1;locus_tag=C9E95_RS11255;product=glycyl radical protein;protein_id=WP_023993608.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 14873 15682 . - . ID=gene-C9E95_RS11260;Name=C9E95_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11260;old_locus_tag=C9E95_11550 NZ_PYJW01000105.1 Protein Homology CDS 14873 15682 . - 0 ID=cds-WP_000217910.1;Parent=gene-C9E95_RS11260;Dbxref=GenBank:WP_000217910.1;Name=WP_000217910.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459819.1;locus_tag=C9E95_RS11260;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000217910.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 15944 17209 . + . ID=gene-C9E95_RS11265;Name=C9E95_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11265;old_locus_tag=C9E95_11555 NZ_PYJW01000105.1 Protein Homology CDS 15944 17209 . + 0 ID=cds-WP_080203867.1;Parent=gene-C9E95_RS11265;Dbxref=GenBank:WP_080203867.1;Name=WP_080203867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459818.1;locus_tag=C9E95_RS11265;product=DUF1479 domain-containing protein;protein_id=WP_080203867.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 17331 18926 . - . ID=gene-C9E95_RS11270;Name=C9E95_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11270;old_locus_tag=C9E95_11565 NZ_PYJW01000105.1 Protein Homology CDS 17331 18926 . - 0 ID=cds-WP_000961480.1;Parent=gene-C9E95_RS11270;Dbxref=GenBank:WP_000961480.1;Name=WP_000961480.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961428.1;locus_tag=C9E95_RS11270;product=ABC-F family ATPase;protein_id=WP_000961480.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 19145 20065 . + . ID=gene-C9E95_RS11275;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=C9E95_RS11275;old_locus_tag=C9E95_11570 NZ_PYJW01000105.1 Protein Homology CDS 19145 20065 . + 0 ID=cds-WP_001056404.1;Parent=gene-C9E95_RS11275;Dbxref=GenBank:WP_001056404.1;Name=WP_001056404.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459814.1;locus_tag=C9E95_RS11275;product=L%2CD-transpeptidase;protein_id=WP_001056404.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 20109 21221 . - . ID=gene-C9E95_RS11280;Name=C9E95_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11280;old_locus_tag=C9E95_11575 NZ_PYJW01000105.1 Protein Homology CDS 20109 21221 . - 0 ID=cds-WP_001046525.1;Parent=gene-C9E95_RS11280;Dbxref=GenBank:WP_001046525.1;Name=WP_001046525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459813.1;locus_tag=C9E95_RS11280;product=anion transporter;protein_id=WP_001046525.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 21218 21691 . - . ID=gene-C9E95_RS11285;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=C9E95_RS11285;old_locus_tag=C9E95_11580 NZ_PYJW01000105.1 Protein Homology CDS 21218 21691 . - 0 ID=cds-WP_000533542.1;Parent=gene-C9E95_RS11285;Dbxref=GenBank:WP_000533542.1;Name=WP_000533542.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459812.1;locus_tag=C9E95_RS11285;product=manganese-binding transcriptional regulator MntR;protein_id=WP_000533542.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 21877 22005 . + . ID=gene-C9E95_RS11290;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=C9E95_RS11290;old_locus_tag=C9E95_11585 NZ_PYJW01000105.1 Protein Homology CDS 21877 22005 . + 0 ID=cds-WP_001001755.1;Parent=gene-C9E95_RS11290;Dbxref=GenBank:WP_001001755.1;Name=WP_001001755.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=C9E95_RS11290;product=manganase accumulation protein MntS;protein_id=WP_001001755.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 22270 23850 . + . ID=gene-C9E95_RS11295;Name=C9E95_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11295;old_locus_tag=C9E95_11590 NZ_PYJW01000105.1 Protein Homology CDS 22270 23850 . + 0 ID=cds-WP_080203866.1;Parent=gene-C9E95_RS11295;Dbxref=GenBank:WP_080203866.1;Name=WP_080203866.1;Ontology_term=GO:0009244,GO:1900727,GO:0016776;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459811.1;locus_tag=C9E95_RS11295;product=phosphoethanolamine transferase;protein_id=WP_080203866.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 23913 24428 . - . ID=gene-C9E95_RS11300;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=C9E95_RS11300;old_locus_tag=C9E95_11595 NZ_PYJW01000105.1 Protein Homology CDS 23913 24428 . - 0 ID=cds-WP_000716763.1;Parent=gene-C9E95_RS11300;Dbxref=GenBank:WP_000716763.1;Name=WP_000716763.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459810.1;locus_tag=C9E95_RS11300;product=outer membrane protein OmpX;protein_id=WP_000716763.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 24782 25669 . + . ID=gene-C9E95_RS11305;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=C9E95_RS11305;old_locus_tag=C9E95_11600 NZ_PYJW01000105.1 Protein Homology CDS 24782 25669 . + 0 ID=cds-WP_001119554.1;Parent=gene-C9E95_RS11305;Dbxref=GenBank:WP_001119554.1;Name=WP_001119554.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459809.1;locus_tag=C9E95_RS11305;product=threonine/homoserine exporter RhtA;protein_id=WP_001119554.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 25972 26475 . + . ID=gene-C9E95_RS11310;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=C9E95_RS11310;old_locus_tag=C9E95_11605 NZ_PYJW01000105.1 Protein Homology CDS 25972 26475 . + 0 ID=cds-WP_000100805.1;Parent=gene-C9E95_RS11310;Dbxref=GenBank:WP_000100805.1;Name=WP_000100805.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=C9E95_RS11310;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100805.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 26952 27698 . + . ID=gene-C9E95_RS11315;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=C9E95_RS11315;old_locus_tag=C9E95_11610 NZ_PYJW01000105.1 Protein Homology CDS 26952 27698 . + 0 ID=cds-WP_000838671.1;Parent=gene-C9E95_RS11315;Dbxref=GenBank:WP_000838671.1;Name=WP_000838671.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=C9E95_RS11315;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_000838671.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 27844 28503 . + . ID=gene-C9E95_RS11320;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=C9E95_RS11320;old_locus_tag=C9E95_11615 NZ_PYJW01000105.1 Protein Homology CDS 27844 28503 . + 0 ID=cds-WP_001159076.1;Parent=gene-C9E95_RS11320;Dbxref=GenBank:WP_001159076.1;Name=WP_001159076.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=C9E95_RS11320;product=glutamine ABC transporter permease GlnP;protein_id=WP_001159076.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 28500 29222 . + . ID=gene-C9E95_RS11325;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=C9E95_RS11325;old_locus_tag=C9E95_11620 NZ_PYJW01000105.1 Protein Homology CDS 28500 29222 . + 0 ID=cds-WP_000569093.1;Parent=gene-C9E95_RS11325;Dbxref=GenBank:WP_000569093.1;Name=WP_000569093.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=C9E95_RS11325;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_000569093.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 29341 31563 . + . ID=gene-C9E95_RS11330;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=C9E95_RS11330;old_locus_tag=C9E95_11625 NZ_PYJW01000105.1 Protein Homology CDS 29341 31563 . + 0 ID=cds-WP_080219705.1;Parent=gene-C9E95_RS11330;Dbxref=GenBank:WP_080219705.1;Name=WP_080219705.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459804.1;locus_tag=C9E95_RS11330;product=mechanosensitive channel protein;protein_id=WP_080219705.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 31560 32486 . - . ID=gene-C9E95_RS11335;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=C9E95_RS11335;old_locus_tag=C9E95_11630 NZ_PYJW01000105.1 Protein Homology CDS 31560 32486 . - 0 ID=cds-WP_001275962.1;Parent=gene-C9E95_RS11335;Dbxref=GenBank:WP_001275962.1;Name=WP_001275962.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459803.1;locus_tag=C9E95_RS11335;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_001275962.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 32691 32957 . + . ID=gene-C9E95_RS11340;Name=C9E95_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11340;old_locus_tag=C9E95_11635 NZ_PYJW01000105.1 Protein Homology CDS 32691 32957 . + 0 ID=cds-WP_000146332.1;Parent=gene-C9E95_RS11340;Dbxref=GenBank:WP_000146332.1;Name=WP_000146332.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459802.1;locus_tag=C9E95_RS11340;product=DksA/TraR family C4-type zinc finger protein;protein_id=WP_000146332.1;transl_table=11 NZ_PYJW01000105.1 RefSeq gene 33242 33502 . + . ID=gene-C9E95_RS11345;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=C9E95_RS11345;old_locus_tag=C9E95_11640 NZ_PYJW01000105.1 Protein Homology CDS 33242 33502 . + 0 ID=cds-WP_000849089.1;Parent=gene-C9E95_RS11345;Dbxref=GenBank:WP_000849089.1;Name=WP_000849089.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459801.1;locus_tag=C9E95_RS11345;product=DUF1471 family protein YbiJ;protein_id=WP_000849089.1;transl_table=11 ##sequence-region NZ_PYJW01000181.1 1 31653 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000181.1 RefSeq region 1 31653 . + . ID=NZ_PYJW01000181.1:1..31653;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000181.1 RefSeq gene 77 1447 . + . ID=gene-C9E95_RS21220;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=C9E95_RS21220;old_locus_tag=C9E95_21725 NZ_PYJW01000181.1 Protein Homology CDS 77 1447 . + 0 ID=cds-WP_001555879.1;Parent=gene-C9E95_RS21220;Dbxref=GenBank:WP_001555879.1;Name=WP_001555879.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459395.1;locus_tag=C9E95_RS21220;product=proline-specific permease ProY;protein_id=WP_001555879.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 1609 3426 . + . ID=gene-C9E95_RS21225;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=C9E95_RS21225;old_locus_tag=C9E95_21730 NZ_PYJW01000181.1 Protein Homology CDS 1609 3426 . + 0 ID=cds-WP_080204109.1;Parent=gene-C9E95_RS21225;Dbxref=GenBank:WP_080204109.1;Name=WP_080204109.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459396.1;locus_tag=C9E95_RS21225;product=maltodextrin glucosidase;protein_id=WP_080204109.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 3498 4100 . - . ID=gene-C9E95_RS21230;Name=C9E95_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21230;old_locus_tag=C9E95_21735 NZ_PYJW01000181.1 Protein Homology CDS 3498 4100 . - 0 ID=cds-WP_000244731.1;Parent=gene-C9E95_RS21230;Dbxref=GenBank:WP_000244731.1;Name=WP_000244731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459397.1;locus_tag=C9E95_RS21230;product=peroxiredoxin;protein_id=WP_000244731.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 4310 4891 . - . ID=gene-C9E95_RS21235;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=C9E95_RS21235;old_locus_tag=C9E95_21740 NZ_PYJW01000181.1 Protein Homology CDS 4310 4891 . - 0 ID=cds-WP_080204110.1;Parent=gene-C9E95_RS21235;Dbxref=GenBank:WP_080204110.1;Name=WP_080204110.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459398.1;locus_tag=C9E95_RS21235;product=ACP phosphodiesterase;protein_id=WP_080204110.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 4985 6049 . + . ID=gene-C9E95_RS21240;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=C9E95_RS21240;old_locus_tag=C9E95_21745 NZ_PYJW01000181.1 Protein Homology CDS 4985 6049 . + 0 ID=cds-WP_001266534.1;Parent=gene-C9E95_RS21240;Dbxref=GenBank:WP_001266534.1;Name=WP_001266534.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459399.1;locus_tag=C9E95_RS21240;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001266534.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 6246 7373 . + . ID=gene-C9E95_RS21245;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=C9E95_RS21245;old_locus_tag=C9E95_21755 NZ_PYJW01000181.1 Protein Homology CDS 6246 7373 . + 0 ID=cds-WP_000667302.1;Parent=gene-C9E95_RS21245;Dbxref=GenBank:WP_000667302.1;Name=WP_000667302.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=C9E95_RS21245;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_000667302.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 7396 7728 . + . ID=gene-C9E95_RS21250;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=C9E95_RS21250;old_locus_tag=C9E95_21760 NZ_PYJW01000181.1 Protein Homology CDS 7396 7728 . + 0 ID=cds-WP_000007628.1;Parent=gene-C9E95_RS21250;Dbxref=GenBank:WP_000007628.1;Name=WP_000007628.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=C9E95_RS21250;product=preprotein translocase subunit YajC;protein_id=WP_000007628.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 7756 9603 . + . ID=gene-C9E95_RS21255;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=C9E95_RS21255;old_locus_tag=C9E95_21765 NZ_PYJW01000181.1 Protein Homology CDS 7756 9603 . + 0 ID=cds-WP_000934811.1;Parent=gene-C9E95_RS21255;Dbxref=GenBank:WP_000934811.1;Name=WP_000934811.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=C9E95_RS21255;product=protein translocase subunit SecD;protein_id=WP_000934811.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 9614 10585 . + . ID=gene-C9E95_RS21260;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=C9E95_RS21260;old_locus_tag=C9E95_21770 NZ_PYJW01000181.1 Protein Homology CDS 9614 10585 . + 0 ID=cds-WP_000046629.1;Parent=gene-C9E95_RS21260;Dbxref=GenBank:WP_000046629.1;Name=WP_000046629.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459403.1;locus_tag=C9E95_RS21260;product=protein translocase subunit SecF;protein_id=WP_000046629.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 10733 11098 . + . ID=gene-C9E95_RS21265;Name=C9E95_RS21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21265;old_locus_tag=C9E95_21775 NZ_PYJW01000181.1 Protein Homology CDS 10733 11098 . + 0 ID=cds-WP_000793035.1;Parent=gene-C9E95_RS21265;Dbxref=GenBank:WP_000793035.1;Name=WP_000793035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459404.1;locus_tag=C9E95_RS21265;product=VOC family protein;protein_id=WP_000793035.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 11124 11816 . + . ID=gene-C9E95_RS21270;Name=C9E95_RS21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21270;old_locus_tag=C9E95_21780 NZ_PYJW01000181.1 Protein Homology CDS 11124 11816 . + 0 ID=cds-WP_023202234.1;Parent=gene-C9E95_RS21270;Dbxref=GenBank:WP_023202234.1;Name=WP_023202234.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459405.1;locus_tag=C9E95_RS21270;product=helix-turn-helix transcriptional regulator;protein_id=WP_023202234.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 11986 12333 . + . ID=gene-C9E95_RS21275;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=C9E95_RS21275;old_locus_tag=C9E95_21785 NZ_PYJW01000181.1 Protein Homology CDS 11986 12333 . + 0 ID=cds-WP_000974818.1;Parent=gene-C9E95_RS21275;Dbxref=GenBank:WP_000974818.1;Name=WP_000974818.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459406.1;locus_tag=C9E95_RS21275;product=HNH nuclease YajD;protein_id=WP_000974818.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 12771 12878 . + . ID=gene-C9E95_RS21285;Name=C9E95_RS21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21285 NZ_PYJW01000181.1 Protein Homology CDS 12771 12878 . + 0 ID=cds-WP_000176312.1;Parent=gene-C9E95_RS21285;Dbxref=GenBank:WP_000176312.1;Name=WP_000176312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000176312.1;locus_tag=C9E95_RS21285;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000176312.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 12962 13825 . - . ID=gene-C9E95_RS21290;Name=C9E95_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21290;old_locus_tag=C9E95_21800 NZ_PYJW01000181.1 Protein Homology CDS 12962 13825 . - 0 ID=cds-WP_000752021.1;Parent=gene-C9E95_RS21290;Dbxref=GenBank:WP_000752021.1;Name=WP_000752021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459408.1;locus_tag=C9E95_RS21290;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_000752021.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 14125 14664 . - . ID=gene-C9E95_RS21295;Name=C9E95_RS21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21295;old_locus_tag=C9E95_21805 NZ_PYJW01000181.1 Protein Homology CDS 14125 14664 . - 0 ID=cds-WP_135369886.1;Parent=gene-C9E95_RS21295;Dbxref=GenBank:WP_135369886.1;Name=WP_135369886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459409.1;locus_tag=C9E95_RS21295;product=DUF3251 domain-containing protein;protein_id=WP_135369886.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 14816 15265 . + . ID=gene-C9E95_RS21300;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=C9E95_RS21300;old_locus_tag=C9E95_21810 NZ_PYJW01000181.1 Protein Homology CDS 14816 15265 . + 0 ID=cds-WP_000543533.1;Parent=gene-C9E95_RS21300;Dbxref=GenBank:WP_000543533.1;Name=WP_000543533.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=C9E95_RS21300;product=transcriptional regulator NrdR;protein_id=WP_000543533.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 15269 16372 . + . ID=gene-C9E95_RS21305;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=C9E95_RS21305;old_locus_tag=C9E95_21815 NZ_PYJW01000181.1 Protein Homology CDS 15269 16372 . + 0 ID=cds-WP_023994050.1;Parent=gene-C9E95_RS21305;Dbxref=GenBank:WP_023994050.1;Name=WP_023994050.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459411.1;locus_tag=C9E95_RS21305;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_023994050.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 16461 16931 . + . ID=gene-C9E95_RS21310;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=C9E95_RS21310;old_locus_tag=C9E95_21820 NZ_PYJW01000181.1 Protein Homology CDS 16461 16931 . + 0 ID=cds-WP_001021372.1;Parent=gene-C9E95_RS21310;Dbxref=GenBank:WP_001021372.1;Name=WP_001021372.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=C9E95_RS21310;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021372.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 16952 17371 . + . ID=gene-C9E95_RS21315;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=C9E95_RS21315;old_locus_tag=C9E95_21825 NZ_PYJW01000181.1 Protein Homology CDS 16952 17371 . + 0 ID=cds-WP_000801129.1;Parent=gene-C9E95_RS21315;Dbxref=GenBank:WP_000801129.1;Name=WP_000801129.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459413.1;locus_tag=C9E95_RS21315;product=transcription antitermination factor NusB;protein_id=WP_000801129.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 17453 18433 . + . ID=gene-C9E95_RS21320;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=C9E95_RS21320;old_locus_tag=C9E95_21830 NZ_PYJW01000181.1 Protein Homology CDS 17453 18433 . + 0 ID=cds-WP_000752133.1;Parent=gene-C9E95_RS21320;Dbxref=GenBank:WP_000752133.1;Name=WP_000752133.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308497.1;locus_tag=C9E95_RS21320;product=thiamine-phosphate kinase;protein_id=WP_000752133.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 18411 18926 . + . ID=gene-C9E95_RS21325;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=C9E95_RS21325;old_locus_tag=C9E95_21835 NZ_PYJW01000181.1 Protein Homology CDS 18411 18926 . + 0 ID=cds-WP_000154063.1;Parent=gene-C9E95_RS21325;Dbxref=GenBank:WP_000154063.1;Name=WP_000154063.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459415.1;locus_tag=C9E95_RS21325;product=phosphatidylglycerophosphatase A;protein_id=WP_000154063.1;transl_table=11 NZ_PYJW01000181.1 RefSeq pseudogene 18931 19022 . - . ID=gene-C9E95_RS23820;Name=C9E95_RS23820;end_range=19022,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23820;partial=true;pseudo=true;start_range=.,18931 NZ_PYJW01000181.1 Protein Homology CDS 18931 19022 . - 0 ID=cds-C9E95_RS23820;Parent=gene-C9E95_RS23820;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=19022,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=C9E95_RS23820;partial=true;product=hypothetical protein;pseudo=true;start_range=.,18931;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 19030 20019 . - . ID=gene-C9E95_RS21330;Name=C9E95_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21330;old_locus_tag=C9E95_21840 NZ_PYJW01000181.1 Protein Homology CDS 19030 20019 . - 0 ID=cds-WP_023994049.1;Parent=gene-C9E95_RS21330;Dbxref=GenBank:WP_023994049.1;Name=WP_023994049.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459416.1;locus_tag=C9E95_RS21330;product=aldo/keto reductase;protein_id=WP_023994049.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 20076 21938 . - . ID=gene-C9E95_RS21335;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=C9E95_RS21335;old_locus_tag=C9E95_21845 NZ_PYJW01000181.1 Protein Homology CDS 20076 21938 . - 0 ID=cds-WP_000006777.1;Parent=gene-C9E95_RS21335;Dbxref=GenBank:WP_000006777.1;Name=WP_000006777.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459417.1;locus_tag=C9E95_RS21335;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_000006777.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 21962 22861 . - . ID=gene-C9E95_RS21340;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=C9E95_RS21340;old_locus_tag=C9E95_21850 NZ_PYJW01000181.1 Protein Homology CDS 21962 22861 . - 0 ID=cds-WP_000348074.1;Parent=gene-C9E95_RS21340;Dbxref=GenBank:WP_000348074.1;Name=WP_000348074.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459418.1;locus_tag=C9E95_RS21340;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_000348074.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 22862 23104 . - . ID=gene-C9E95_RS21345;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=C9E95_RS21345;old_locus_tag=C9E95_21855 NZ_PYJW01000181.1 Protein Homology CDS 22862 23104 . - 0 ID=cds-WP_001124944.1;Parent=gene-C9E95_RS21345;Dbxref=GenBank:WP_001124944.1;Name=WP_001124944.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459419.1;locus_tag=C9E95_RS21345;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001124944.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 23314 24762 . + . ID=gene-C9E95_RS21350;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=C9E95_RS21350;old_locus_tag=C9E95_21860 NZ_PYJW01000181.1 Protein Homology CDS 23314 24762 . + 0 ID=cds-WP_000668652.1;Parent=gene-C9E95_RS21350;Dbxref=GenBank:WP_000668652.1;Name=WP_000668652.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=C9E95_RS21350;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_000668652.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 24806 25603 . - . ID=gene-C9E95_RS21355;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=C9E95_RS21355;old_locus_tag=C9E95_21865 NZ_PYJW01000181.1 Protein Homology CDS 24806 25603 . - 0 ID=cds-WP_000909803.1;Parent=gene-C9E95_RS21355;Dbxref=GenBank:WP_000909803.1;Name=WP_000909803.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnV;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459421.1;locus_tag=C9E95_RS21355;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=WP_000909803.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 25606 26466 . - . ID=gene-C9E95_RS21360;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=protein_coding;locus_tag=C9E95_RS21360;old_locus_tag=C9E95_21870 NZ_PYJW01000181.1 Protein Homology CDS 25606 26466 . - 0 ID=cds-WP_023994048.1;Parent=gene-C9E95_RS21360;Dbxref=GenBank:WP_023994048.1;Name=WP_023994048.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnU;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459422.1;locus_tag=C9E95_RS21360;product=2-aminoethylphosphonate ABC transporter permease subunit;protein_id=WP_023994048.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 26469 27578 . - . ID=gene-C9E95_RS21365;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=C9E95_RS21365;old_locus_tag=C9E95_21875 NZ_PYJW01000181.1 Protein Homology CDS 26469 27578 . - 0 ID=cds-WP_023994375.1;Parent=gene-C9E95_RS21365;Dbxref=GenBank:WP_023994375.1;Name=WP_023994375.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;gene=phnT;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459423.1;locus_tag=C9E95_RS21365;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WP_023994375.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 27584 28597 . - . ID=gene-C9E95_RS21370;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=C9E95_RS21370;old_locus_tag=C9E95_21880 NZ_PYJW01000181.1 Protein Homology CDS 27584 28597 . - 0 ID=cds-WP_000778008.1;Parent=gene-C9E95_RS21370;Dbxref=GenBank:WP_000778008.1;Name=WP_000778008.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=phnS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459424.1;locus_tag=C9E95_RS21370;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WP_000778008.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 28795 29514 . - . ID=gene-C9E95_RS21375;Name=phnR;gbkey=Gene;gene=phnR;gene_biotype=protein_coding;locus_tag=C9E95_RS21375;old_locus_tag=C9E95_21885 NZ_PYJW01000181.1 Protein Homology CDS 28795 29514 . - 0 ID=cds-WP_000836268.1;Parent=gene-C9E95_RS21375;Dbxref=GenBank:WP_000836268.1;Name=WP_000836268.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=phnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459425.1;locus_tag=C9E95_RS21375;product=phosphonate utilization transcriptional regulator PhnR;protein_id=WP_000836268.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 29654 30757 . + . ID=gene-C9E95_RS21380;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=protein_coding;locus_tag=C9E95_RS21380;old_locus_tag=C9E95_21890 NZ_PYJW01000181.1 Protein Homology CDS 29654 30757 . + 0 ID=cds-WP_023260086.1;Parent=gene-C9E95_RS21380;Dbxref=GenBank:WP_023260086.1;Name=WP_023260086.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;gene=phnW;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459426.1;locus_tag=C9E95_RS21380;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_023260086.1;transl_table=11 NZ_PYJW01000181.1 RefSeq gene 30767 31576 . + . ID=gene-C9E95_RS21385;Name=phnX;gbkey=Gene;gene=phnX;gene_biotype=protein_coding;locus_tag=C9E95_RS21385;old_locus_tag=C9E95_21895 NZ_PYJW01000181.1 Protein Homology CDS 30767 31576 . + 0 ID=cds-WP_080204111.1;Parent=gene-C9E95_RS21385;Dbxref=GenBank:WP_080204111.1;Name=WP_080204111.1;Ontology_term=GO:0019700,GO:0050194;gbkey=CDS;gene=phnX;go_function=phosphonoacetaldehyde hydrolase activity|0050194||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229535.1;locus_tag=C9E95_RS21385;product=phosphonoacetaldehyde hydrolase;protein_id=WP_080204111.1;transl_table=11 ##sequence-region NZ_PYJW01000044.1 1 31032 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000044.1 RefSeq region 1 31032 . + . ID=NZ_PYJW01000044.1:1..31032;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000044.1 RefSeq gene 1 74 . + . ID=gene-C9E95_RS03250;Name=C9E95_RS03250;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E95_RS03250;old_locus_tag=C9E95_03325;partial=true;start_range=.,1 NZ_PYJW01000044.1 cmsearch ncRNA 1 74 . + . ID=rna-C9E95_RS03250;Parent=gene-C9E95_RS03250;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS03250;partial=true;product=RtT sRNA;start_range=.,1 NZ_PYJW01000044.1 cmsearch exon 1 74 . + . ID=exon-C9E95_RS03250-1;Parent=rna-C9E95_RS03250;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS03250;partial=true;product=RtT sRNA;start_range=.,1 NZ_PYJW01000044.1 RefSeq gene 118 249 . + . ID=gene-C9E95_RS03255;Name=C9E95_RS03255;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E95_RS03255;old_locus_tag=C9E95_03330 NZ_PYJW01000044.1 cmsearch ncRNA 118 249 . + . ID=rna-C9E95_RS03255;Parent=gene-C9E95_RS03255;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS03255;product=RtT sRNA NZ_PYJW01000044.1 cmsearch exon 118 249 . + . ID=exon-C9E95_RS03255-1;Parent=rna-C9E95_RS03255;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS03255;product=RtT sRNA NZ_PYJW01000044.1 RefSeq gene 352 1881 . - . ID=gene-C9E95_RS03260;Name=C9E95_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03260;old_locus_tag=C9E95_03335 NZ_PYJW01000044.1 Protein Homology CDS 352 1881 . - 0 ID=cds-WP_080203673.1;Parent=gene-C9E95_RS03260;Dbxref=GenBank:WP_080203673.1;Name=WP_080203673.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460716.1;locus_tag=C9E95_RS03260;product=tetratricopeptide repeat protein;protein_id=WP_080203673.1;transl_table=11 NZ_PYJW01000044.1 RefSeq gene 2123 2800 . - . ID=gene-C9E95_RS03270;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=C9E95_RS03270;old_locus_tag=C9E95_03345 NZ_PYJW01000044.1 Protein Homology CDS 2123 2800 . - 0 ID=cds-WP_000545594.1;Parent=gene-C9E95_RS03270;Dbxref=GenBank:WP_000545594.1;Name=WP_000545594.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460717.1;locus_tag=C9E95_RS03270;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000545594.1;transl_table=11 NZ_PYJW01000044.1 RefSeq gene 2800 3510 . - . ID=gene-C9E95_RS03275;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=C9E95_RS03275;old_locus_tag=C9E95_03350 NZ_PYJW01000044.1 Protein Homology CDS 2800 3510 . - 0 ID=cds-WP_000571668.1;Parent=gene-C9E95_RS03275;Dbxref=GenBank:WP_000571668.1;Name=WP_000571668.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460718.1;locus_tag=C9E95_RS03275;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_000571668.1;transl_table=11 NZ_PYJW01000044.1 RefSeq gene 3507 5045 . - . ID=gene-C9E95_RS03280;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=C9E95_RS03280;old_locus_tag=C9E95_03355 NZ_PYJW01000044.1 Protein Homology CDS 3507 5045 . - 0 ID=cds-WP_080203672.1;Parent=gene-C9E95_RS03280;Dbxref=GenBank:WP_080203672.1;Name=WP_080203672.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460719.1;locus_tag=C9E95_RS03280;product=nitrate reductase subunit beta;protein_id=WP_080203672.1;transl_table=11 NZ_PYJW01000044.1 RefSeq gene 5042 8785 . - . ID=gene-C9E95_RS03285;Name=C9E95_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03285;old_locus_tag=C9E95_03360 NZ_PYJW01000044.1 Protein Homology CDS 5042 8785 . - 0 ID=cds-WP_000032881.1;Parent=gene-C9E95_RS03285;Dbxref=GenBank:WP_000032881.1;Name=WP_000032881.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=C9E95_RS03285;product=nitrate reductase subunit alpha;protein_id=WP_000032881.1;transl_table=11 NZ_PYJW01000044.1 RefSeq gene 9173 10570 . - . ID=gene-C9E95_RS03290;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=C9E95_RS03290;old_locus_tag=C9E95_03365 NZ_PYJW01000044.1 Protein Homology CDS 9173 10570 . - 0 ID=cds-WP_000019848.1;Parent=gene-C9E95_RS03290;Dbxref=GenBank:WP_000019848.1;Name=WP_000019848.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460721.1;locus_tag=C9E95_RS03290;product=nitrate transporter NarK;protein_id=WP_000019848.1;transl_table=11 NZ_PYJW01000044.1 RefSeq gene 10911 12707 . + . ID=gene-C9E95_RS03300;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=C9E95_RS03300;old_locus_tag=C9E95_03375 NZ_PYJW01000044.1 Protein Homology CDS 10911 12707 . + 0 ID=cds-WP_000476244.1;Parent=gene-C9E95_RS03300;Dbxref=GenBank:WP_000476244.1;Name=WP_000476244.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460722.1;locus_tag=C9E95_RS03300;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_000476244.1;transl_table=11 NZ_PYJW01000044.1 RefSeq gene 12700 13350 . + . ID=gene-C9E95_RS03305;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=C9E95_RS03305;old_locus_tag=C9E95_03380 NZ_PYJW01000044.1 Protein Homology CDS 12700 13350 . + 0 ID=cds-WP_001064598.1;Parent=gene-C9E95_RS03305;Dbxref=GenBank:WP_001064598.1;Name=WP_001064598.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460723.1;locus_tag=C9E95_RS03305;product=two-component system response regulator NarL;protein_id=WP_001064598.1;transl_table=11 NZ_PYJW01000044.1 RefSeq gene 13351 14775 . - . ID=gene-C9E95_RS03310;Name=C9E95_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03310;old_locus_tag=C9E95_03385 NZ_PYJW01000044.1 Protein Homology CDS 13351 14775 . - 0 ID=cds-WP_079840558.1;Parent=gene-C9E95_RS03310;Dbxref=GenBank:WP_079840558.1;Name=WP_079840558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460724.3;locus_tag=C9E95_RS03310;product=YchO/YchP family invasin;protein_id=WP_079840558.1;transl_table=11 NZ_PYJW01000044.1 RefSeq gene 14952 15305 . + . ID=gene-C9E95_RS03315;Name=C9E95_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03315;old_locus_tag=C9E95_03390 NZ_PYJW01000044.1 Protein Homology CDS 14952 15305 . + 0 ID=cds-WP_080203671.1;Parent=gene-C9E95_RS03315;Dbxref=GenBank:WP_080203671.1;Name=WP_080203671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460725.1;locus_tag=C9E95_RS03315;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WP_080203671.1;transl_table=11 NZ_PYJW01000044.1 RefSeq gene 15385 15615 . - . ID=gene-C9E95_RS03320;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=C9E95_RS03320;old_locus_tag=C9E95_03395 NZ_PYJW01000044.1 Protein Homology CDS 15385 15615 . - 0 ID=cds-WP_001146392.1;Parent=gene-C9E95_RS03320;Dbxref=GenBank:WP_001146392.1;Name=WP_001146392.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460726.1;locus_tag=C9E95_RS03320;product=putative cation transport regulator ChaB;protein_id=WP_001146392.1;transl_table=11 NZ_PYJW01000044.1 RefSeq gene 15882 16982 . + . ID=gene-C9E95_RS03325;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=C9E95_RS03325;old_locus_tag=C9E95_03400 NZ_PYJW01000044.1 Protein Homology CDS 15882 16982 . + 0 ID=cds-WP_000148418.1;Parent=gene-C9E95_RS03325;Dbxref=GenBank:WP_000148418.1;Name=WP_000148418.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460727.1;locus_tag=C9E95_RS03325;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_000148418.1;transl_table=11 NZ_PYJW01000044.1 RefSeq gene 17036 17890 . - . ID=gene-C9E95_RS03330;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=C9E95_RS03330;old_locus_tag=C9E95_03405 NZ_PYJW01000044.1 Protein Homology CDS 17036 17890 . - 0 ID=cds-WP_000811046.1;Parent=gene-C9E95_RS03330;Dbxref=GenBank:WP_000811046.1;Name=WP_000811046.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460728.1;locus_tag=C9E95_RS03330;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_000811046.1;transl_table=11 NZ_PYJW01000044.1 RefSeq gene 17928 18737 . - . ID=gene-C9E95_RS03335;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=C9E95_RS03335;old_locus_tag=C9E95_03410 NZ_PYJW01000044.1 Protein Homology CDS 17928 18737 . - 0 ID=cds-WP_001257065.1;Parent=gene-C9E95_RS03335;Dbxref=GenBank:WP_001257065.1;Name=WP_001257065.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460729.1;locus_tag=C9E95_RS03335;product=invasion regulator SirB1;protein_id=WP_001257065.1;transl_table=11 NZ_PYJW01000044.1 RefSeq gene 18741 19130 . - . ID=gene-C9E95_RS03340;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=C9E95_RS03340;old_locus_tag=C9E95_03415 NZ_PYJW01000044.1 Protein Homology CDS 18741 19130 . - 0 ID=cds-WP_080203670.1;Parent=gene-C9E95_RS03340;Dbxref=GenBank:WP_080203670.1;Name=WP_080203670.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460730.1;locus_tag=C9E95_RS03340;product=invasion regulator SirB2;protein_id=WP_080203670.1;transl_table=11 NZ_PYJW01000044.1 RefSeq gene 19127 19960 . - . ID=gene-C9E95_RS03345;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=C9E95_RS03345;old_locus_tag=C9E95_03420 NZ_PYJW01000044.1 Protein Homology CDS 19127 19960 . - 0 ID=cds-WP_023993315.1;Parent=gene-C9E95_RS03345;Dbxref=GenBank:WP_023993315.1;Name=WP_023993315.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460731.1;locus_tag=C9E95_RS03345;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_023993315.1;transl_table=11 NZ_PYJW01000044.1 RefSeq gene 19960 21042 . - . ID=gene-C9E95_RS03350;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=C9E95_RS03350;old_locus_tag=C9E95_03425 NZ_PYJW01000044.1 Protein Homology CDS 19960 21042 . - 0 ID=cds-WP_000804703.1;Parent=gene-C9E95_RS03350;Dbxref=GenBank:WP_000804703.1;Name=WP_000804703.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=C9E95_RS03350;product=peptide chain release factor 1;protein_id=WP_000804703.1;transl_table=11 NZ_PYJW01000044.1 RefSeq gene 21083 22339 . - . ID=gene-C9E95_RS03355;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=C9E95_RS03355;old_locus_tag=C9E95_03430 NZ_PYJW01000044.1 Protein Homology CDS 21083 22339 . - 0 ID=cds-WP_000173208.1;Parent=gene-C9E95_RS03355;Dbxref=GenBank:WP_000173208.1;Name=WP_000173208.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=C9E95_RS03355;product=glutamyl-tRNA reductase;protein_id=WP_000173208.1;transl_table=11 NZ_PYJW01000044.1 RefSeq gene 22653 23276 . + . ID=gene-C9E95_RS03360;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=C9E95_RS03360;old_locus_tag=C9E95_03435 NZ_PYJW01000044.1 Protein Homology CDS 22653 23276 . + 0 ID=cds-WP_000174484.1;Parent=gene-C9E95_RS03360;Dbxref=GenBank:WP_000174484.1;Name=WP_000174484.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460734.1;locus_tag=C9E95_RS03360;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_000174484.1;transl_table=11 NZ_PYJW01000044.1 RefSeq gene 23273 24124 . + . ID=gene-C9E95_RS03365;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=C9E95_RS03365;old_locus_tag=C9E95_03440 NZ_PYJW01000044.1 Protein Homology CDS 23273 24124 . + 0 ID=cds-WP_000988253.1;Parent=gene-C9E95_RS03365;Dbxref=GenBank:WP_000988253.1;Name=WP_000988253.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460735.1;locus_tag=C9E95_RS03365;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_000988253.1;transl_table=11 NZ_PYJW01000044.1 RefSeq gene 24390 25337 . + . ID=gene-C9E95_RS03370;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=C9E95_RS03370;old_locus_tag=C9E95_03445 NZ_PYJW01000044.1 Protein Homology CDS 24390 25337 . + 0 ID=cds-WP_001518537.1;Parent=gene-C9E95_RS03370;Dbxref=GenBank:WP_001518537.1;Name=WP_001518537.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=C9E95_RS03370;product=ribose-phosphate diphosphokinase;protein_id=WP_001518537.1;transl_table=11 NZ_PYJW01000044.1 RefSeq gene 25462 27147 . + . ID=gene-C9E95_RS03375;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=C9E95_RS03375;old_locus_tag=C9E95_03450 NZ_PYJW01000044.1 Protein Homology CDS 25462 27147 . + 0 ID=cds-WP_080203669.1;Parent=gene-C9E95_RS03375;Dbxref=GenBank:WP_080203669.1;Name=WP_080203669.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525165.1;locus_tag=C9E95_RS03375;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_080203669.1;transl_table=11 NZ_PYJW01000044.1 RefSeq gene 27192 27470 . - . ID=gene-C9E95_RS03380;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=C9E95_RS03380;old_locus_tag=C9E95_03455 NZ_PYJW01000044.1 Protein Homology CDS 27192 27470 . - 0 ID=cds-WP_000823878.1;Parent=gene-C9E95_RS03380;Dbxref=GenBank:WP_000823878.1;Name=WP_000823878.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460738.1;locus_tag=C9E95_RS03380;product=stress-induced protein YchH;protein_id=WP_000823878.1;transl_table=11 NZ_PYJW01000044.1 RefSeq gene 27746 28330 . + . ID=gene-C9E95_RS03385;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=C9E95_RS03385;old_locus_tag=C9E95_03460 NZ_PYJW01000044.1 Protein Homology CDS 27746 28330 . + 0 ID=cds-WP_000985595.1;Parent=gene-C9E95_RS03385;Dbxref=GenBank:WP_000985595.1;Name=WP_000985595.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=C9E95_RS03385;product=aminoacyl-tRNA hydrolase;protein_id=WP_000985595.1;transl_table=11 NZ_PYJW01000044.1 RefSeq gene 28447 29538 . + . ID=gene-C9E95_RS03390;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=C9E95_RS03390;old_locus_tag=C9E95_03465 NZ_PYJW01000044.1 Protein Homology CDS 28447 29538 . + 0 ID=cds-WP_000505850.1;Parent=gene-C9E95_RS03390;Dbxref=GenBank:WP_000505850.1;Name=WP_000505850.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=C9E95_RS03390;product=redox-regulated ATPase YchF;protein_id=WP_000505850.1;transl_table=11 NZ_PYJW01000044.1 RefSeq gene 30425 31032 . + . ID=gene-C9E95_RS03400;Name=C9E95_RS03400;end_range=31032,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03400;old_locus_tag=C9E95_03475;partial=true NZ_PYJW01000044.1 Protein Homology CDS 30425 31032 . + 0 ID=cds-WP_135369812.1;Parent=gene-C9E95_RS03400;Dbxref=GenBank:WP_135369812.1;Name=WP_135369812.1;end_range=31032,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001137288.1;locus_tag=C9E95_RS03400;partial=true;product=hypothetical protein;protein_id=WP_135369812.1;transl_table=11 ##sequence-region NZ_PYJW01000029.1 1 551 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000029.1 RefSeq region 1 551 . + . ID=NZ_PYJW01000029.1:1..551;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000029.1 RefSeq pseudogene 206 548 . + . ID=gene-C9E95_RS01745;Name=C9E95_RS01745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS01745;old_locus_tag=C9E95_01780;pseudo=true NZ_PYJW01000029.1 Protein Homology CDS 206 548 . + 0 ID=cds-C9E95_RS01745;Parent=gene-C9E95_RS01745;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463025.1;locus_tag=C9E95_RS01745;product=cytoplasmic protein;pseudo=true;transl_table=11 ##sequence-region NZ_PYJW01000109.1 1 550 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000109.1 RefSeq region 1 550 . + . ID=NZ_PYJW01000109.1:1..550;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000109.1 RefSeq pseudogene 1 550 . + . ID=gene-C9E95_RS11545;Name=C9E95_RS11545;end_range=550,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS11545;old_locus_tag=C9E95_11840;partial=true;pseudo=true;start_range=.,1 NZ_PYJW01000109.1 Protein Homology CDS 1 550 . + 1 ID=cds-C9E95_RS11545;Parent=gene-C9E95_RS11545;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=550,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000415709.1;locus_tag=C9E95_RS11545;partial=true;product=glycosyl transferase family 1;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJW01000169.1 1 30575 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000169.1 RefSeq region 1 30575 . + . ID=NZ_PYJW01000169.1:1..30575;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000169.1 RefSeq gene 118 384 . - . ID=gene-C9E95_RS19905;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=C9E95_RS19905;old_locus_tag=C9E95_20390 NZ_PYJW01000169.1 Protein Homology CDS 118 384 . - 0 ID=cds-WP_001185666.1;Parent=gene-C9E95_RS19905;Dbxref=GenBank:WP_001185666.1;Name=WP_001185666.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460772.1;locus_tag=C9E95_RS19905;product=cell division topological specificity factor MinE;protein_id=WP_001185666.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 388 1200 . - . ID=gene-C9E95_RS19910;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=C9E95_RS19910;old_locus_tag=C9E95_20395 NZ_PYJW01000169.1 Protein Homology CDS 388 1200 . - 0 ID=cds-WP_000101047.1;Parent=gene-C9E95_RS19910;Dbxref=GenBank:WP_000101047.1;Name=WP_000101047.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=C9E95_RS19910;product=septum site-determining protein MinD;protein_id=WP_000101047.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 1224 1931 . - . ID=gene-C9E95_RS19915;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=C9E95_RS19915;old_locus_tag=C9E95_20400 NZ_PYJW01000169.1 Protein Homology CDS 1224 1931 . - 0 ID=cds-WP_000072527.1;Parent=gene-C9E95_RS19915;Dbxref=GenBank:WP_000072527.1;Name=WP_000072527.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460770.1;locus_tag=C9E95_RS19915;product=septum site-determining protein MinC;protein_id=WP_000072527.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 2057 2350 . + . ID=gene-C9E95_RS19920;Name=C9E95_RS19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19920;old_locus_tag=C9E95_20405 NZ_PYJW01000169.1 Protein Homology CDS 2057 2350 . + 0 ID=cds-WP_001537109.1;Parent=gene-C9E95_RS19920;Dbxref=GenBank:WP_001537109.1;Name=WP_001537109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=C9E95_RS19920;product=YcgL domain-containing protein;protein_id=WP_001537109.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 2400 3059 . + . ID=gene-C9E95_RS19925;Name=C9E95_RS19925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19925;old_locus_tag=C9E95_20410 NZ_PYJW01000169.1 Protein Homology CDS 2400 3059 . + 0 ID=cds-WP_001537367.1;Parent=gene-C9E95_RS19925;Dbxref=GenBank:WP_001537367.1;Name=WP_001537367.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460768.1;locus_tag=C9E95_RS19925;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_001537367.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 3152 3598 . + . ID=gene-C9E95_RS19930;Name=C9E95_RS19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19930;old_locus_tag=C9E95_20415 NZ_PYJW01000169.1 Protein Homology CDS 3152 3598 . + 0 ID=cds-WP_001285703.1;Parent=gene-C9E95_RS19930;Dbxref=GenBank:WP_001285703.1;Name=WP_001285703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=C9E95_RS19930;product=YcgN family cysteine cluster protein;protein_id=WP_001285703.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 3950 4087 . + . ID=gene-C9E95_RS19935;Name=C9E95_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19935;old_locus_tag=C9E95_20420 NZ_PYJW01000169.1 Protein Homology CDS 3950 4087 . + 0 ID=cds-WP_001519337.1;Parent=gene-C9E95_RS19935;Dbxref=GenBank:WP_001519337.1;Name=WP_001519337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460766.1;locus_tag=C9E95_RS19935;product=hypothetical protein;protein_id=WP_001519337.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 4279 4452 . + . ID=gene-C9E95_RS19940;Name=C9E95_RS19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19940;old_locus_tag=C9E95_20425 NZ_PYJW01000169.1 Protein Homology CDS 4279 4452 . + 0 ID=cds-WP_001083582.1;Parent=gene-C9E95_RS19940;Dbxref=GenBank:WP_001083582.1;Name=WP_001083582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460765.1;locus_tag=C9E95_RS19940;product=GnsA/GnsB family addiction module toxin;protein_id=WP_001083582.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 4524 4865 . - . ID=gene-C9E95_RS19945;Name=C9E95_RS19945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19945;old_locus_tag=C9E95_20430 NZ_PYJW01000169.1 Protein Homology CDS 4524 4865 . - 0 ID=cds-WP_000018967.1;Parent=gene-C9E95_RS19945;Dbxref=GenBank:WP_000018967.1;Name=WP_000018967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460764.1;locus_tag=C9E95_RS19945;product=DUF1971 domain-containing protein;protein_id=WP_000018967.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 4974 5504 . - . ID=gene-C9E95_RS19950;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=C9E95_RS19950;old_locus_tag=C9E95_20435 NZ_PYJW01000169.1 Protein Homology CDS 4974 5504 . - 0 ID=cds-WP_000943475.1;Parent=gene-C9E95_RS19950;Dbxref=GenBank:WP_000943475.1;Name=WP_000943475.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460763.1;locus_tag=C9E95_RS19950;product=disulfide bond formation protein DsbB;protein_id=WP_000943475.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 5646 7190 . - . ID=gene-C9E95_RS19955;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=C9E95_RS19955;old_locus_tag=C9E95_20440 NZ_PYJW01000169.1 Protein Homology CDS 5646 7190 . - 0 ID=cds-WP_135369878.1;Parent=gene-C9E95_RS19955;Dbxref=GenBank:WP_135369878.1;Name=WP_135369878.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460762.1;locus_tag=C9E95_RS19955;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_135369878.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 7410 8129 . + . ID=gene-C9E95_RS19960;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=C9E95_RS19960;old_locus_tag=C9E95_20445 NZ_PYJW01000169.1 Protein Homology CDS 7410 8129 . + 0 ID=cds-WP_000234826.1;Parent=gene-C9E95_RS19960;Dbxref=GenBank:WP_000234826.1;Name=WP_000234826.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460761.1;locus_tag=C9E95_RS19960;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_000234826.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 8176 9708 . - . ID=gene-C9E95_RS19965;Name=C9E95_RS19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19965;old_locus_tag=C9E95_20450 NZ_PYJW01000169.1 Protein Homology CDS 8176 9708 . - 0 ID=cds-WP_000190831.1;Parent=gene-C9E95_RS19965;Dbxref=GenBank:WP_000190831.1;Name=WP_000190831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460760.3;locus_tag=C9E95_RS19965;product=SpoVR family protein;protein_id=WP_000190831.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 10031 11329 . + . ID=gene-C9E95_RS19970;Name=C9E95_RS19970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19970;old_locus_tag=C9E95_20455 NZ_PYJW01000169.1 Protein Homology CDS 10031 11329 . + 0 ID=cds-WP_061378893.1;Parent=gene-C9E95_RS19970;Dbxref=GenBank:WP_061378893.1;Name=WP_061378893.1;Ontology_term=GO:0055130,GO:0008718,GO:0016491,GO:0071949;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;go_process=D-alanine catabolic process|0055130||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460759.1;locus_tag=C9E95_RS19970;product=D-amino acid dehydrogenase;protein_id=WP_061378893.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 11343 12413 . + . ID=gene-C9E95_RS19975;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=C9E95_RS19975;old_locus_tag=C9E95_20460 NZ_PYJW01000169.1 Protein Homology CDS 11343 12413 . + 0 ID=cds-WP_000197905.1;Parent=gene-C9E95_RS19975;Dbxref=GenBank:WP_000197905.1;Name=WP_000197905.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460758.1;locus_tag=C9E95_RS19975;product=catabolic alanine racemase DadX;protein_id=WP_000197905.1;transl_table=11 NZ_PYJW01000169.1 RefSeq pseudogene 12446 12538 . + . ID=gene-C9E95_RS23815;Name=C9E95_RS23815;end_range=12538,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23815;partial=true;pseudo=true NZ_PYJW01000169.1 Protein Homology CDS 12446 12538 . + 0 ID=cds-C9E95_RS23815;Parent=gene-C9E95_RS23815;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=12538,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049075.1;locus_tag=C9E95_RS23815;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJW01000169.1 RefSeq pseudogene 12494 14209 . - . ID=gene-C9E95_RS19980;Name=C9E95_RS19980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS19980;old_locus_tag=C9E95_20465;partial=true;pseudo=true;start_range=.,12494 NZ_PYJW01000169.1 Protein Homology CDS 12494 14209 . - 0 ID=cds-C9E95_RS19980;Parent=gene-C9E95_RS19980;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF003714.0;locus_tag=C9E95_RS19980;partial=true;product=potassium/proton antiporter;pseudo=true;start_range=.,12494;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 14306 15220 . - . ID=gene-C9E95_RS19985;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=C9E95_RS19985;old_locus_tag=C9E95_20470 NZ_PYJW01000169.1 Protein Homology CDS 14306 15220 . - 0 ID=cds-WP_000051613.1;Parent=gene-C9E95_RS19985;Dbxref=GenBank:WP_000051613.1;Name=WP_000051613.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460756.1;locus_tag=C9E95_RS19985;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_000051613.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 15392 16003 . + . ID=gene-C9E95_RS19990;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=C9E95_RS19990;old_locus_tag=C9E95_20475 NZ_PYJW01000169.1 Protein Homology CDS 15392 16003 . + 0 ID=cds-WP_000776974.1;Parent=gene-C9E95_RS19990;Dbxref=GenBank:WP_000776974.1;Name=WP_000776974.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460755.1;locus_tag=C9E95_RS19990;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_000776974.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 16017 16751 . - . ID=gene-C9E95_RS19995;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=C9E95_RS19995;old_locus_tag=C9E95_20480 NZ_PYJW01000169.1 Protein Homology CDS 16017 16751 . - 0 ID=cds-WP_000017418.1;Parent=gene-C9E95_RS19995;Dbxref=GenBank:WP_000017418.1;Name=WP_000017418.1;Ontology_term=GO:0071945,GO:0035438;gbkey=CDS;gene=ycgR;go_function=cyclic-di-GMP binding|0035438||IEA;go_process=regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed|0071945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=C9E95_RS19995;product=flagellar brake protein YcgR;protein_id=WP_000017418.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 16920 17174 . + . ID=gene-C9E95_RS20000;Name=C9E95_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20000;old_locus_tag=C9E95_20485 NZ_PYJW01000169.1 Protein Homology CDS 16920 17174 . + 0 ID=cds-WP_000511323.1;Parent=gene-C9E95_RS20000;Dbxref=GenBank:WP_000511323.1;Name=WP_000511323.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460753.1;locus_tag=C9E95_RS20000;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000511323.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 17237 18949 . - . ID=gene-C9E95_RS20005;Name=C9E95_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20005;old_locus_tag=C9E95_20490 NZ_PYJW01000169.1 Protein Homology CDS 17237 18949 . - 0 ID=cds-WP_080190941.1;Parent=gene-C9E95_RS20005;Dbxref=GenBank:WP_080190941.1;Name=WP_080190941.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=C9E95_RS20005;product=alpha%2Calpha-trehalase;protein_id=WP_080190941.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 19163 20437 . - . ID=gene-C9E95_RS20010;Name=C9E95_RS20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20010;old_locus_tag=C9E95_20495 NZ_PYJW01000169.1 Protein Homology CDS 19163 20437 . - 0 ID=cds-WP_001526439.1;Parent=gene-C9E95_RS20010;Dbxref=GenBank:WP_001526439.1;Name=WP_001526439.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=C9E95_RS20010;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_001526439.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 20832 20921 . - . ID=gene-C9E95_RS20015;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=C9E95_RS20015;old_locus_tag=C9E95_20500 NZ_PYJW01000169.1 Protein Homology CDS 20832 20921 . - 0 ID=cds-WP_000270306.1;Parent=gene-C9E95_RS20015;Dbxref=GenBank:WP_000270306.1;Name=WP_000270306.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460750.1;locus_tag=C9E95_RS20015;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WP_000270306.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 20934 22070 . - . ID=gene-C9E95_RS20020;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=C9E95_RS20020;old_locus_tag=C9E95_20505 NZ_PYJW01000169.1 Protein Homology CDS 20934 22070 . - 0 ID=cds-WP_000888110.1;Parent=gene-C9E95_RS20020;Dbxref=GenBank:WP_000888110.1;Name=WP_000888110.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460749.1;locus_tag=C9E95_RS20020;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000888110.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 22082 23626 . - . ID=gene-C9E95_RS20025;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=C9E95_RS20025;old_locus_tag=C9E95_20510 NZ_PYJW01000169.1 Protein Homology CDS 22082 23626 . - 0 ID=cds-WP_000263613.1;Parent=gene-C9E95_RS20025;Dbxref=GenBank:WP_000263613.1;Name=WP_000263613.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460748.1;locus_tag=C9E95_RS20025;product=cytochrome bd-II oxidase subunit 1;protein_id=WP_000263613.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 23701 24549 . - . ID=gene-C9E95_RS20030;Name=C9E95_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20030;old_locus_tag=C9E95_20515 NZ_PYJW01000169.1 Protein Homology CDS 23701 24549 . - 0 ID=cds-WP_000063377.1;Parent=gene-C9E95_RS20030;Dbxref=GenBank:WP_000063377.1;Name=WP_000063377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460747.1;locus_tag=C9E95_RS20030;product=hydrogenase expression/formation protein;protein_id=WP_000063377.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 24546 24950 . - . ID=gene-C9E95_RS20035;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=C9E95_RS20035;old_locus_tag=C9E95_20520 NZ_PYJW01000169.1 Protein Homology CDS 24546 24950 . - 0 ID=cds-WP_001262580.1;Parent=gene-C9E95_RS20035;Dbxref=GenBank:WP_001262580.1;Name=WP_001262580.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460746.1;locus_tag=C9E95_RS20035;product=hydrogenase-1 operon protein HyaE;protein_id=WP_001262580.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 24940 25536 . - . ID=gene-C9E95_RS20040;Name=hyaD;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;locus_tag=C9E95_RS20040;old_locus_tag=C9E95_20525 NZ_PYJW01000169.1 Protein Homology CDS 24940 25536 . - 0 ID=cds-WP_023254289.1;Parent=gene-C9E95_RS20040;Dbxref=GenBank:WP_023254289.1;Name=WP_023254289.1;gbkey=CDS;gene=hyaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460745.1;locus_tag=C9E95_RS20040;product=hydrogenase 1 maturation protease;protein_id=WP_023254289.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 25533 26264 . - . ID=gene-C9E95_RS20045;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=C9E95_RS20045;old_locus_tag=C9E95_20530 NZ_PYJW01000169.1 Protein Homology CDS 25533 26264 . - 0 ID=cds-WP_023993317.1;Parent=gene-C9E95_RS20045;Dbxref=GenBank:WP_023993317.1;Name=WP_023993317.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460744.1;locus_tag=C9E95_RS20045;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_023993317.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 26283 28076 . - . ID=gene-C9E95_RS20050;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=C9E95_RS20050;old_locus_tag=C9E95_20535 NZ_PYJW01000169.1 Protein Homology CDS 26283 28076 . - 0 ID=cds-WP_000070984.1;Parent=gene-C9E95_RS20050;Dbxref=GenBank:WP_000070984.1;Name=WP_000070984.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460743.1;locus_tag=C9E95_RS20050;product=Ni/Fe-hydrogenase large subunit;protein_id=WP_000070984.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 28073 29191 . - . ID=gene-C9E95_RS20055;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=C9E95_RS20055;old_locus_tag=C9E95_20540 NZ_PYJW01000169.1 Protein Homology CDS 28073 29191 . - 0 ID=cds-WP_001058312.1;Parent=gene-C9E95_RS20055;Dbxref=GenBank:WP_001058312.1;Name=WP_001058312.1;gbkey=CDS;gene=hyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460742.1;locus_tag=C9E95_RS20055;product=hydrogenase 1 small subunit;protein_id=WP_001058312.1;transl_table=11 NZ_PYJW01000169.1 RefSeq gene 29686 30575 . + . ID=gene-C9E95_RS20060;Name=C9E95_RS20060;end_range=30575,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20060;old_locus_tag=C9E95_20545;partial=true NZ_PYJW01000169.1 Protein Homology CDS 29686 30575 . + 0 ID=cds-WP_135369879.1;Parent=gene-C9E95_RS20060;Dbxref=GenBank:WP_135369879.1;Name=WP_135369879.1;end_range=30575,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460741.1;locus_tag=C9E95_RS20060;partial=true;product=cytoplasmic protein;protein_id=WP_135369879.1;transl_table=11 ##sequence-region NZ_PYJW01000010.1 1 549 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000010.1 RefSeq region 1 549 . + . ID=NZ_PYJW01000010.1:1..549;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000010.1 RefSeq pseudogene 1 460 . - . ID=gene-C9E95_RS00710;Name=C9E95_RS00710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS00710;old_locus_tag=C9E95_00720;partial=true;pseudo=true;start_range=.,1 NZ_PYJW01000010.1 GeneMarkS-2+ CDS 1 460 . - 0 ID=cds-C9E95_RS00710;Parent=gene-C9E95_RS00710;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E95_RS00710;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJW01000132.1 1 30218 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000132.1 RefSeq region 1 30218 . + . ID=NZ_PYJW01000132.1:1..30218;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000132.1 RefSeq gene 1213 2082 . - . ID=gene-C9E95_RS13785;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=C9E95_RS13785;old_locus_tag=C9E95_14135 NZ_PYJW01000132.1 Protein Homology CDS 1213 2082 . - 0 ID=cds-WP_000114631.1;Parent=gene-C9E95_RS13785;Dbxref=GenBank:WP_000114631.1;Name=WP_000114631.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=C9E95_RS13785;product=succinate--CoA ligase subunit alpha;protein_id=WP_000114631.1;transl_table=11 NZ_PYJW01000132.1 RefSeq gene 2082 3248 . - . ID=gene-C9E95_RS13790;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=C9E95_RS13790;old_locus_tag=C9E95_14140 NZ_PYJW01000132.1 Protein Homology CDS 2082 3248 . - 0 ID=cds-WP_080203763.1;Parent=gene-C9E95_RS13790;Dbxref=GenBank:WP_080203763.1;Name=WP_080203763.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=C9E95_RS13790;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_080203763.1;transl_table=11 NZ_PYJW01000132.1 RefSeq gene 3390 4598 . - . ID=gene-C9E95_RS13795;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=C9E95_RS13795;old_locus_tag=C9E95_14145 NZ_PYJW01000132.1 Protein Homology CDS 3390 4598 . - 0 ID=cds-WP_000099858.1;Parent=gene-C9E95_RS13795;Dbxref=GenBank:WP_000099858.1;Name=WP_000099858.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459722.1;locus_tag=C9E95_RS13795;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_000099858.1;transl_table=11 NZ_PYJW01000132.1 RefSeq gene 4613 7414 . - . ID=gene-C9E95_RS13800;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=C9E95_RS13800;old_locus_tag=C9E95_14150 NZ_PYJW01000132.1 Protein Homology CDS 4613 7414 . - 0 ID=cds-WP_001181500.1;Parent=gene-C9E95_RS13800;Dbxref=GenBank:WP_001181500.1;Name=WP_001181500.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459721.1;locus_tag=C9E95_RS13800;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_001181500.1;transl_table=11 NZ_PYJW01000132.1 RefSeq gene 7940 8656 . - . ID=gene-C9E95_RS13805;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=C9E95_RS13805;old_locus_tag=C9E95_14155 NZ_PYJW01000132.1 Protein Homology CDS 7940 8656 . - 0 ID=cds-WP_001537859.1;Parent=gene-C9E95_RS13805;Dbxref=GenBank:WP_001537859.1;Name=WP_001537859.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=C9E95_RS13805;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_001537859.1;transl_table=11 NZ_PYJW01000132.1 RefSeq gene 8673 10439 . - . ID=gene-C9E95_RS13810;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=C9E95_RS13810;old_locus_tag=C9E95_14160 NZ_PYJW01000132.1 Protein Homology CDS 8673 10439 . - 0 ID=cds-WP_000775561.1;Parent=gene-C9E95_RS13810;Dbxref=GenBank:WP_000775561.1;Name=WP_000775561.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=C9E95_RS13810;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_000775561.1;transl_table=11 NZ_PYJW01000132.1 RefSeq gene 10439 10786 . - . ID=gene-C9E95_RS13815;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=C9E95_RS13815;old_locus_tag=C9E95_14165 NZ_PYJW01000132.1 Protein Homology CDS 10439 10786 . - 0 ID=cds-WP_000254356.1;Parent=gene-C9E95_RS13815;Dbxref=GenBank:WP_000254356.1;Name=WP_000254356.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=C9E95_RS13815;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_000254356.1;transl_table=11 NZ_PYJW01000132.1 RefSeq gene 10780 11184 . - . ID=gene-C9E95_RS13820;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=C9E95_RS13820;old_locus_tag=C9E95_14170 NZ_PYJW01000132.1 Protein Homology CDS 10780 11184 . - 0 ID=cds-WP_000263340.1;Parent=gene-C9E95_RS13820;Dbxref=GenBank:WP_000263340.1;Name=WP_000263340.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=C9E95_RS13820;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_000263340.1;transl_table=11 NZ_PYJW01000132.1 RefSeq gene 11567 11698 . + . ID=gene-C9E95_RS23790;Name=C9E95_RS23790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23790 NZ_PYJW01000132.1 Protein Homology CDS 11567 11698 . + 0 ID=cds-WP_418142699.1;Parent=gene-C9E95_RS23790;Dbxref=GenBank:WP_418142699.1;Name=WP_418142699.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049035.1;locus_tag=C9E95_RS23790;product=hypothetical protein;protein_id=WP_418142699.1;transl_table=11 NZ_PYJW01000132.1 RefSeq gene 11924 13207 . + . ID=gene-C9E95_RS13825;Name=C9E95_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13825;old_locus_tag=C9E95_14185 NZ_PYJW01000132.1 Protein Homology CDS 11924 13207 . + 0 ID=cds-WP_000785808.1;Parent=gene-C9E95_RS13825;Dbxref=GenBank:WP_000785808.1;Name=WP_000785808.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459715.1;locus_tag=C9E95_RS13825;product=citrate synthase;protein_id=WP_000785808.1;transl_table=11 NZ_PYJW01000132.1 RefSeq gene 13343 14389 . + . ID=gene-C9E95_RS13830;Name=C9E95_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13830;old_locus_tag=C9E95_14190 NZ_PYJW01000132.1 Protein Homology CDS 13343 14389 . + 0 ID=cds-WP_080203764.1;Parent=gene-C9E95_RS13830;Dbxref=GenBank:WP_080203764.1;Name=WP_080203764.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459714.1;locus_tag=C9E95_RS13830;product=AbrB family transcriptional regulator;protein_id=WP_080203764.1;transl_table=11 NZ_PYJW01000132.1 RefSeq gene 14444 15235 . - . ID=gene-C9E95_RS13835;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=C9E95_RS13835;old_locus_tag=C9E95_14195 NZ_PYJW01000132.1 Protein Homology CDS 14444 15235 . - 0 ID=cds-WP_001113967.1;Parent=gene-C9E95_RS13835;Dbxref=GenBank:WP_001113967.1;Name=WP_001113967.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459713.1;locus_tag=C9E95_RS13835;product=endonuclease VIII;protein_id=WP_001113967.1;transl_table=11 NZ_PYJW01000132.1 RefSeq gene 15357 16091 . - . ID=gene-C9E95_RS13840;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=C9E95_RS13840;old_locus_tag=C9E95_14200 NZ_PYJW01000132.1 Protein Homology CDS 15357 16091 . - 0 ID=cds-WP_001017922.1;Parent=gene-C9E95_RS13840;Dbxref=GenBank:WP_001017922.1;Name=WP_001017922.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459699.1;locus_tag=C9E95_RS13840;product=5-oxoprolinase subunit PxpA;protein_id=WP_001017922.1;transl_table=11 NZ_PYJW01000132.1 RefSeq gene 16081 17013 . - . ID=gene-C9E95_RS13845;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=C9E95_RS13845;old_locus_tag=C9E95_14205 NZ_PYJW01000132.1 Protein Homology CDS 16081 17013 . - 0 ID=cds-WP_080203765.1;Parent=gene-C9E95_RS13845;Dbxref=GenBank:WP_080203765.1;Name=WP_080203765.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpC;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459698.1;locus_tag=C9E95_RS13845;product=5-oxoprolinase subunit PxpC;protein_id=WP_080203765.1;transl_table=11 NZ_PYJW01000132.1 RefSeq gene 17007 17663 . - . ID=gene-C9E95_RS13850;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=C9E95_RS13850;old_locus_tag=C9E95_14210 NZ_PYJW01000132.1 Protein Homology CDS 17007 17663 . - 0 ID=cds-WP_001188371.1;Parent=gene-C9E95_RS13850;Dbxref=GenBank:WP_001188371.1;Name=WP_001188371.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459697.1;locus_tag=C9E95_RS13850;product=5-oxoprolinase subunit PxpB;protein_id=WP_001188371.1;transl_table=11 NZ_PYJW01000132.1 RefSeq gene 17679 18422 . - . ID=gene-C9E95_RS13855;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=C9E95_RS13855;old_locus_tag=C9E95_14215 NZ_PYJW01000132.1 Protein Homology CDS 17679 18422 . - 0 ID=cds-WP_000798844.1;Parent=gene-C9E95_RS13855;Dbxref=GenBank:WP_000798844.1;Name=WP_000798844.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=C9E95_RS13855;product=radiation resistance protein YbgI;protein_id=WP_000798844.1;transl_table=11 NZ_PYJW01000132.1 RefSeq gene 18751 20232 . + . ID=gene-C9E95_RS13860;Name=C9E95_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13860;old_locus_tag=C9E95_14225 NZ_PYJW01000132.1 Protein Homology CDS 18751 20232 . + 0 ID=cds-WP_001041123.1;Parent=gene-C9E95_RS13860;Dbxref=GenBank:WP_001041123.1;Name=WP_001041123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459695.1;locus_tag=C9E95_RS13860;product=MFS transporter;protein_id=WP_001041123.1;transl_table=11 NZ_PYJW01000132.1 RefSeq gene 20271 21692 . - . ID=gene-C9E95_RS13865;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=C9E95_RS13865;old_locus_tag=C9E95_14230 NZ_PYJW01000132.1 Protein Homology CDS 20271 21692 . - 0 ID=cds-WP_001142022.1;Parent=gene-C9E95_RS13865;Dbxref=GenBank:WP_001142022.1;Name=WP_001142022.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459694.1;locus_tag=C9E95_RS13865;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_001142022.1;transl_table=11 NZ_PYJW01000132.1 RefSeq gene 21804 22010 . - . ID=gene-C9E95_RS13870;Name=C9E95_RS13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13870;old_locus_tag=C9E95_14235 NZ_PYJW01000132.1 Protein Homology CDS 21804 22010 . - 0 ID=cds-WP_000401435.1;Parent=gene-C9E95_RS13870;Dbxref=GenBank:WP_000401435.1;Name=WP_000401435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459693.1;locus_tag=C9E95_RS13870;product=YbfA family protein;protein_id=WP_000401435.1;transl_table=11 NZ_PYJW01000132.1 RefSeq gene 22347 22436 . + . ID=gene-C9E95_RS13875;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=C9E95_RS13875;old_locus_tag=C9E95_14240 NZ_PYJW01000132.1 Protein Homology CDS 22347 22436 . + 0 ID=cds-WP_001670793.1;Parent=gene-C9E95_RS13875;Dbxref=GenBank:WP_001670793.1;Name=WP_001670793.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=C9E95_RS13875;product=K(+)-transporting ATPase subunit F;protein_id=WP_001670793.1;transl_table=11 NZ_PYJW01000132.1 RefSeq gene 22436 24115 . + . ID=gene-C9E95_RS13880;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=C9E95_RS13880;old_locus_tag=C9E95_14245 NZ_PYJW01000132.1 Protein Homology CDS 22436 24115 . + 0 ID=cds-WP_000730066.1;Parent=gene-C9E95_RS13880;Dbxref=GenBank:WP_000730066.1;Name=WP_000730066.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459691.1;locus_tag=C9E95_RS13880;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_000730066.1;transl_table=11 NZ_PYJW01000132.1 RefSeq gene 24136 26184 . + . ID=gene-C9E95_RS13885;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=C9E95_RS13885;old_locus_tag=C9E95_14250 NZ_PYJW01000132.1 Protein Homology CDS 24136 26184 . + 0 ID=cds-WP_079788569.1;Parent=gene-C9E95_RS13885;Dbxref=GenBank:WP_079788569.1;Name=WP_079788569.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459690.1;locus_tag=C9E95_RS13885;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_079788569.1;transl_table=11 NZ_PYJW01000132.1 RefSeq gene 26193 26777 . + . ID=gene-C9E95_RS13890;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=C9E95_RS13890;old_locus_tag=C9E95_14255 NZ_PYJW01000132.1 Protein Homology CDS 26193 26777 . + 0 ID=cds-WP_001531408.1;Parent=gene-C9E95_RS13890;Dbxref=GenBank:WP_001531408.1;Name=WP_001531408.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459689.1;locus_tag=C9E95_RS13890;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_001531408.1;transl_table=11 NZ_PYJW01000132.1 RefSeq gene 26774 29458 . + . ID=gene-C9E95_RS13895;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=C9E95_RS13895;old_locus_tag=C9E95_14260 NZ_PYJW01000132.1 Protein Homology CDS 26774 29458 . + 0 ID=cds-WP_000997468.1;Parent=gene-C9E95_RS13895;Dbxref=GenBank:WP_000997468.1;Name=WP_000997468.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459688.1;locus_tag=C9E95_RS13895;product=two-component system sensor histidine kinase KdpD;protein_id=WP_000997468.1;transl_table=11 NZ_PYJW01000132.1 RefSeq gene 29455 30132 . + . ID=gene-C9E95_RS13900;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=C9E95_RS13900;old_locus_tag=C9E95_14265 NZ_PYJW01000132.1 Protein Homology CDS 29455 30132 . + 0 ID=cds-WP_000186054.1;Parent=gene-C9E95_RS13900;Dbxref=GenBank:WP_000186054.1;Name=WP_000186054.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459687.1;locus_tag=C9E95_RS13900;product=two-component system response regulator KdpE;protein_id=WP_000186054.1;transl_table=11 ##sequence-region NZ_PYJW01000069.1 1 29738 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000069.1 RefSeq region 1 29738 . + . ID=NZ_PYJW01000069.1:1..29738;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000069.1 RefSeq gene 1 214 . - . ID=gene-C9E95_RS06665;Name=C9E95_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06665;old_locus_tag=C9E95_06820;partial=true;start_range=.,1 NZ_PYJW01000069.1 Protein Homology CDS 1 214 . - 0 ID=cds-WP_000031662.1-2;Parent=gene-C9E95_RS06665;Dbxref=GenBank:WP_000031662.1;Name=WP_000031662.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=C9E95_RS06665;partial=true;product=GTP-binding protein;protein_id=WP_000031662.1;start_range=.,1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 286 2400 . - . ID=gene-C9E95_RS06670;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=C9E95_RS06670;old_locus_tag=C9E95_06825 NZ_PYJW01000069.1 Protein Homology CDS 286 2400 . - 0 ID=cds-WP_000124693.1;Parent=gene-C9E95_RS06670;Dbxref=GenBank:WP_000124693.1;Name=WP_000124693.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=C9E95_RS06670;product=elongation factor G;protein_id=WP_000124693.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 2497 2967 . - . ID=gene-C9E95_RS06675;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=C9E95_RS06675;old_locus_tag=C9E95_06830 NZ_PYJW01000069.1 Protein Homology CDS 2497 2967 . - 0 ID=cds-WP_001138042.1;Parent=gene-C9E95_RS06675;Dbxref=GenBank:WP_001138042.1;Name=WP_001138042.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=C9E95_RS06675;product=30S ribosomal protein S7;protein_id=WP_001138042.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 3063 3437 . - . ID=gene-C9E95_RS06680;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=C9E95_RS06680;old_locus_tag=C9E95_06835 NZ_PYJW01000069.1 Protein Homology CDS 3063 3437 . - 0 ID=cds-WP_000246815.1;Parent=gene-C9E95_RS06680;Dbxref=GenBank:WP_000246815.1;Name=WP_000246815.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=C9E95_RS06680;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 3563 3850 . - . ID=gene-C9E95_RS06685;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=C9E95_RS06685;old_locus_tag=C9E95_06840 NZ_PYJW01000069.1 Protein Homology CDS 3563 3850 . - 0 ID=cds-WP_000903400.1;Parent=gene-C9E95_RS06685;Dbxref=GenBank:WP_000903400.1;Name=WP_000903400.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462353.1;locus_tag=C9E95_RS06685;product=sulfurtransferase complex subunit TusB;protein_id=WP_000903400.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 3858 4214 . - . ID=gene-C9E95_RS06690;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=C9E95_RS06690;old_locus_tag=C9E95_06845 NZ_PYJW01000069.1 Protein Homology CDS 3858 4214 . - 0 ID=cds-WP_000820705.1;Parent=gene-C9E95_RS06690;Dbxref=GenBank:WP_000820705.1;Name=WP_000820705.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462354.1;locus_tag=C9E95_RS06690;product=sulfurtransferase complex subunit TusC;protein_id=WP_000820705.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 4214 4600 . - . ID=gene-C9E95_RS06695;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=C9E95_RS06695;old_locus_tag=C9E95_06850 NZ_PYJW01000069.1 Protein Homology CDS 4214 4600 . - 0 ID=cds-WP_001268012.1;Parent=gene-C9E95_RS06695;Dbxref=GenBank:WP_001268012.1;Name=WP_001268012.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462355.1;locus_tag=C9E95_RS06695;product=sulfurtransferase complex subunit TusD;protein_id=WP_001268012.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 4600 5322 . - . ID=gene-C9E95_RS06700;Name=C9E95_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06700;old_locus_tag=C9E95_06855 NZ_PYJW01000069.1 Protein Homology CDS 4600 5322 . - 0 ID=cds-WP_000091471.1;Parent=gene-C9E95_RS06700;Dbxref=GenBank:WP_000091471.1;Name=WP_000091471.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462356.1;locus_tag=C9E95_RS06700;product=helix-turn-helix transcriptional regulator;protein_id=WP_000091471.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 5599 6417 . - . ID=gene-C9E95_RS06705;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=C9E95_RS06705;old_locus_tag=C9E95_06860 NZ_PYJW01000069.1 Protein Homology CDS 5599 6417 . - 0 ID=cds-WP_000838225.1;Parent=gene-C9E95_RS06705;Dbxref=GenBank:WP_000838225.1;Name=WP_000838225.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462357.1;locus_tag=C9E95_RS06705;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000838225.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 6637 6855 . + . ID=gene-C9E95_RS06710;Name=C9E95_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06710;old_locus_tag=C9E95_06865 NZ_PYJW01000069.1 Protein Homology CDS 6637 6855 . + 0 ID=cds-WP_001152701.1;Parent=gene-C9E95_RS06710;Dbxref=GenBank:WP_001152701.1;Name=WP_001152701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462358.1;locus_tag=C9E95_RS06710;product=protein SlyX;protein_id=WP_001152701.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 7049 7639 . - . ID=gene-C9E95_RS06715;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=C9E95_RS06715;old_locus_tag=C9E95_06870 NZ_PYJW01000069.1 Protein Homology CDS 7049 7639 . - 0 ID=cds-WP_000861341.1;Parent=gene-C9E95_RS06715;Dbxref=GenBank:WP_000861341.1;Name=WP_000861341.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462359.1;locus_tag=C9E95_RS06715;product=peptidylprolyl isomerase;protein_id=WP_000861341.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 7734 7934 . - . ID=gene-C9E95_RS06720;Name=C9E95_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06720;old_locus_tag=C9E95_06875 NZ_PYJW01000069.1 Protein Homology CDS 7734 7934 . - 0 ID=cds-WP_001007735.1;Parent=gene-C9E95_RS06720;Dbxref=GenBank:WP_001007735.1;Name=WP_001007735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462360.1;locus_tag=C9E95_RS06720;product=YheV family putative zinc ribbon protein;protein_id=WP_001007735.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 7945 9750 . - . ID=gene-C9E95_RS06725;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=C9E95_RS06725;old_locus_tag=C9E95_06880 NZ_PYJW01000069.1 Protein Homology CDS 7945 9750 . - 0 ID=cds-WP_000398133.1;Parent=gene-C9E95_RS06725;Dbxref=GenBank:WP_000398133.1;Name=WP_000398133.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462361.1;locus_tag=C9E95_RS06725;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_000398133.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 9750 10301 . - . ID=gene-C9E95_RS06730;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=C9E95_RS06730;old_locus_tag=C9E95_06885 NZ_PYJW01000069.1 Protein Homology CDS 9750 10301 . - 0 ID=cds-WP_080204116.1;Parent=gene-C9E95_RS06730;Dbxref=GenBank:WP_080204116.1;Name=WP_080204116.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462362.1;locus_tag=C9E95_RS06730;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_080204116.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 10567 12474 . + . ID=gene-C9E95_RS06735;Name=C9E95_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06735;old_locus_tag=C9E95_06890 NZ_PYJW01000069.1 Protein Homology CDS 10567 12474 . + 0 ID=cds-WP_080204115.1;Parent=gene-C9E95_RS06735;Dbxref=GenBank:WP_080204115.1;Name=WP_080204115.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462363.1;locus_tag=C9E95_RS06735;product=ABC transporter ATP-binding protein;protein_id=WP_080204115.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 12637 12858 . + . ID=gene-C9E95_RS06740;Name=C9E95_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06740;old_locus_tag=C9E95_06900 NZ_PYJW01000069.1 Protein Homology CDS 12637 12858 . + 0 ID=cds-WP_023993560.1;Parent=gene-C9E95_RS06740;Dbxref=GenBank:WP_023993560.1;Name=WP_023993560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054026.1;locus_tag=C9E95_RS06740;product=LysR family transcriptional regulator;protein_id=WP_023993560.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 12860 13171 . - . ID=gene-C9E95_RS06745;Name=C9E95_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06745;old_locus_tag=C9E95_06905 NZ_PYJW01000069.1 Protein Homology CDS 12860 13171 . - 0 ID=cds-WP_000047689.1;Parent=gene-C9E95_RS06745;Dbxref=GenBank:WP_000047689.1;Name=WP_000047689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462364.1;locus_tag=C9E95_RS06745;product=monooxygenase;protein_id=WP_000047689.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 13369 14436 . + . ID=gene-C9E95_RS06755;Name=C9E95_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06755;old_locus_tag=C9E95_06910 NZ_PYJW01000069.1 Protein Homology CDS 13369 14436 . + 0 ID=cds-WP_001214115.1;Parent=gene-C9E95_RS06755;Dbxref=GenBank:WP_001214115.1;Name=WP_001214115.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462365.1;locus_tag=C9E95_RS06755;product=hydrolase;protein_id=WP_001214115.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 14433 14651 . + . ID=gene-C9E95_RS06760;Name=C9E95_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06760;old_locus_tag=C9E95_06915 NZ_PYJW01000069.1 Protein Homology CDS 14433 14651 . + 0 ID=cds-WP_000586568.1;Parent=gene-C9E95_RS06760;Dbxref=GenBank:WP_000586568.1;Name=WP_000586568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=C9E95_RS06760;product=YheU family protein;protein_id=WP_000586568.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 14703 15572 . + . ID=gene-C9E95_RS06765;Name=C9E95_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06765;old_locus_tag=C9E95_06920 NZ_PYJW01000069.1 Protein Homology CDS 14703 15572 . + 0 ID=cds-WP_001274690.1;Parent=gene-C9E95_RS06765;Dbxref=GenBank:WP_001274690.1;Name=WP_001274690.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462367.1;locus_tag=C9E95_RS06765;product=phosphoribulokinase;protein_id=WP_001274690.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 15668 16072 . - . ID=gene-C9E95_RS06770;Name=C9E95_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06770;old_locus_tag=C9E95_06925 NZ_PYJW01000069.1 Protein Homology CDS 15668 16072 . - 0 ID=cds-WP_001148919.1;Parent=gene-C9E95_RS06770;Dbxref=GenBank:WP_001148919.1;Name=WP_001148919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462368.1;locus_tag=C9E95_RS06770;product=OsmC family protein;protein_id=WP_001148919.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 16380 17012 . + . ID=gene-C9E95_RS06775;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=C9E95_RS06775;old_locus_tag=C9E95_06930 NZ_PYJW01000069.1 Protein Homology CDS 16380 17012 . + 0 ID=cds-WP_000242758.1;Parent=gene-C9E95_RS06775;Dbxref=GenBank:WP_000242758.1;Name=WP_000242758.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=C9E95_RS06775;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242758.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 17061 19148 . + . ID=gene-C9E95_RS06780;Name=C9E95_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06780;old_locus_tag=C9E95_06935 NZ_PYJW01000069.1 Protein Homology CDS 17061 19148 . + 0 ID=cds-WP_000269311.1;Parent=gene-C9E95_RS06780;Dbxref=GenBank:WP_000269311.1;Name=WP_000269311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462370.1;locus_tag=C9E95_RS06780;product=YccS/YhfK family putative transporter;protein_id=WP_000269311.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 19191 20408 . - . ID=gene-C9E95_RS06785;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=C9E95_RS06785;old_locus_tag=C9E95_06940 NZ_PYJW01000069.1 Protein Homology CDS 19191 20408 . - 0 ID=cds-WP_080204114.1;Parent=gene-C9E95_RS06785;Dbxref=GenBank:WP_080204114.1;Name=WP_080204114.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462371.1;locus_tag=C9E95_RS06785;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_080204114.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 20494 21057 . - . ID=gene-C9E95_RS06790;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=C9E95_RS06790;old_locus_tag=C9E95_06945 NZ_PYJW01000069.1 Protein Homology CDS 20494 21057 . - 0 ID=cds-WP_080204113.1;Parent=gene-C9E95_RS06790;Dbxref=GenBank:WP_080204113.1;Name=WP_080204113.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462372.1;locus_tag=C9E95_RS06790;product=aminodeoxychorismate synthase component 2;protein_id=WP_080204113.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 21089 21691 . - . ID=gene-C9E95_RS06795;Name=C9E95_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06795;old_locus_tag=C9E95_06950 NZ_PYJW01000069.1 Protein Homology CDS 21089 21691 . - 0 ID=cds-WP_080204112.1;Parent=gene-C9E95_RS06795;Dbxref=GenBank:WP_080204112.1;Name=WP_080204112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462373.1;locus_tag=C9E95_RS06795;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_080204112.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 21681 21848 . - . ID=gene-C9E95_RS06800;Name=C9E95_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06800;old_locus_tag=C9E95_06955 NZ_PYJW01000069.1 Protein Homology CDS 21681 21848 . - 0 ID=cds-WP_001620545.1;Parent=gene-C9E95_RS06800;Dbxref=GenBank:WP_001620545.1;Name=WP_001620545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462374.1;locus_tag=C9E95_RS06800;product=YhfG family protein;protein_id=WP_001620545.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 21957 22529 . - . ID=gene-C9E95_RS06805;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=C9E95_RS06805;old_locus_tag=C9E95_06960 NZ_PYJW01000069.1 Protein Homology CDS 21957 22529 . - 0 ID=cds-WP_000920481.1;Parent=gene-C9E95_RS06805;Dbxref=GenBank:WP_000920481.1;Name=WP_000920481.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462375.1;locus_tag=C9E95_RS06805;product=peptidylprolyl isomerase A;protein_id=WP_000920481.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 22807 23988 . + . ID=gene-C9E95_RS06810;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=C9E95_RS06810;old_locus_tag=C9E95_06965 NZ_PYJW01000069.1 Protein Homology CDS 22807 23988 . + 0 ID=cds-WP_000185211.1;Parent=gene-C9E95_RS06810;Dbxref=GenBank:WP_000185211.1;Name=WP_000185211.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462376.1;locus_tag=C9E95_RS06810;product=MFS transporter TsgA;protein_id=WP_000185211.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 24306 26849 . + . ID=gene-C9E95_RS06815;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=C9E95_RS06815;old_locus_tag=C9E95_06970 NZ_PYJW01000069.1 Protein Homology CDS 24306 26849 . + 0 ID=cds-WP_000049241.1;Parent=gene-C9E95_RS06815;Dbxref=GenBank:WP_000049241.1;Name=WP_000049241.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=C9E95_RS06815;product=NADPH-nitrite reductase large subunit;protein_id=WP_000049241.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 26846 27172 . + . ID=gene-C9E95_RS06820;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=C9E95_RS06820;old_locus_tag=C9E95_06975 NZ_PYJW01000069.1 Protein Homology CDS 26846 27172 . + 0 ID=cds-WP_000084814.1;Parent=gene-C9E95_RS06820;Dbxref=GenBank:WP_000084814.1;Name=WP_000084814.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462378.1;locus_tag=C9E95_RS06820;product=nitrite reductase small subunit NirD;protein_id=WP_000084814.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 27438 28247 . + . ID=gene-C9E95_RS06825;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=C9E95_RS06825;old_locus_tag=C9E95_06980 NZ_PYJW01000069.1 Protein Homology CDS 27438 28247 . + 0 ID=cds-WP_000493576.1;Parent=gene-C9E95_RS06825;Dbxref=GenBank:WP_000493576.1;Name=WP_000493576.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462379.1;locus_tag=C9E95_RS06825;product=nitrite transporter NirC;protein_id=WP_000493576.1;transl_table=11 NZ_PYJW01000069.1 RefSeq gene 28259 29632 . + . ID=gene-C9E95_RS06830;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=C9E95_RS06830;old_locus_tag=C9E95_06985 NZ_PYJW01000069.1 Protein Homology CDS 28259 29632 . + 0 ID=cds-WP_000349897.1;Parent=gene-C9E95_RS06830;Dbxref=GenBank:WP_000349897.1;Name=WP_000349897.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462380.1;locus_tag=C9E95_RS06830;product=siroheme synthase CysG;protein_id=WP_000349897.1;transl_table=11 ##sequence-region NZ_PYJW01000187.1 1 29719 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000187.1 RefSeq region 1 29719 . + . ID=NZ_PYJW01000187.1:1..29719;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000187.1 RefSeq gene 257 3142 . + . ID=gene-C9E95_RS21785;Name=C9E95_RS21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21785;old_locus_tag=C9E95_22320 NZ_PYJW01000187.1 Protein Homology CDS 257 3142 . + 0 ID=cds-WP_023993790.1;Parent=gene-C9E95_RS21785;Dbxref=GenBank:WP_023993790.1;Name=WP_023993790.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459368.1;locus_tag=C9E95_RS21785;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_023993790.1;transl_table=11 NZ_PYJW01000187.1 RefSeq gene 3228 3851 . + . ID=gene-C9E95_RS21790;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=C9E95_RS21790;old_locus_tag=C9E95_22325 NZ_PYJW01000187.1 Protein Homology CDS 3228 3851 . + 0 ID=cds-WP_000950242.1;Parent=gene-C9E95_RS21790;Dbxref=GenBank:WP_000950242.1;Name=WP_000950242.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459369.1;locus_tag=C9E95_RS21790;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WP_000950242.1;transl_table=11 NZ_PYJW01000187.1 RefSeq gene 3896 5053 . - . ID=gene-C9E95_RS21795;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=C9E95_RS21795;old_locus_tag=C9E95_22330 NZ_PYJW01000187.1 Protein Homology CDS 3896 5053 . - 0 ID=cds-WP_000830777.1;Parent=gene-C9E95_RS21795;Dbxref=GenBank:WP_000830777.1;Name=WP_000830777.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=C9E95_RS21795;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_000830777.1;transl_table=11 NZ_PYJW01000187.1 RefSeq gene 5400 6620 . + . ID=gene-C9E95_RS21805;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=C9E95_RS21805;old_locus_tag=C9E95_22340 NZ_PYJW01000187.1 Protein Homology CDS 5400 6620 . + 0 ID=cds-WP_000477024.1;Parent=gene-C9E95_RS21805;Dbxref=GenBank:WP_000477024.1;Name=WP_000477024.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459371.1;locus_tag=C9E95_RS21805;product=peptide antibiotic transporter SbmA;protein_id=WP_000477024.1;transl_table=11 NZ_PYJW01000187.1 RefSeq gene 6635 7729 . + . ID=gene-C9E95_RS21810;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=C9E95_RS21810;old_locus_tag=C9E95_22345 NZ_PYJW01000187.1 Protein Homology CDS 6635 7729 . + 0 ID=cds-WP_023993789.1;Parent=gene-C9E95_RS21810;Dbxref=GenBank:WP_023993789.1;Name=WP_023993789.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459372.1;locus_tag=C9E95_RS21810;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WP_023993789.1;transl_table=11 NZ_PYJW01000187.1 RefSeq gene 7767 8075 . - . ID=gene-C9E95_RS21815;Name=C9E95_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21815;old_locus_tag=C9E95_22350 NZ_PYJW01000187.1 Protein Homology CDS 7767 8075 . - 0 ID=cds-WP_000763139.1;Parent=gene-C9E95_RS21815;Dbxref=GenBank:WP_000763139.1;Name=WP_000763139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459373.1;locus_tag=C9E95_RS21815;product=YaiY family protein;protein_id=WP_000763139.1;transl_table=11 NZ_PYJW01000187.1 RefSeq gene 8343 8558 . + . ID=gene-C9E95_RS21820;Name=C9E95_RS21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21820;old_locus_tag=C9E95_22355 NZ_PYJW01000187.1 Protein Homology CDS 8343 8558 . + 0 ID=cds-WP_001239243.1;Parent=gene-C9E95_RS21820;Dbxref=GenBank:WP_001239243.1;Name=WP_001239243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459374.1;locus_tag=C9E95_RS21820;product=DUF2754 family protein;protein_id=WP_001239243.1;transl_table=11 NZ_PYJW01000187.1 RefSeq gene 8584 9678 . - . ID=gene-C9E95_RS21825;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=C9E95_RS21825;old_locus_tag=C9E95_22360 NZ_PYJW01000187.1 Protein Homology CDS 8584 9678 . - 0 ID=cds-WP_001096592.1;Parent=gene-C9E95_RS21825;Dbxref=GenBank:WP_001096592.1;Name=WP_001096592.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459375.1;locus_tag=C9E95_RS21825;product=D-alanine--D-alanine ligase;protein_id=WP_001096592.1;transl_table=11 NZ_PYJW01000187.1 RefSeq gene 9756 10469 . + . ID=gene-C9E95_RS21830;Name=C9E95_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21830;old_locus_tag=C9E95_22365 NZ_PYJW01000187.1 Protein Homology CDS 9756 10469 . + 0 ID=cds-WP_000480794.1;Parent=gene-C9E95_RS21830;Dbxref=GenBank:WP_000480794.1;Name=WP_000480794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459376.1;locus_tag=C9E95_RS21830;product=extensin-like domain-containing protein;protein_id=WP_000480794.1;transl_table=11 NZ_PYJW01000187.1 RefSeq gene 10638 11849 . + . ID=gene-C9E95_RS21835;Name=C9E95_RS21835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21835;old_locus_tag=C9E95_22370 NZ_PYJW01000187.1 Protein Homology CDS 10638 11849 . + 0 ID=cds-WP_000446768.1;Parent=gene-C9E95_RS21835;Dbxref=GenBank:WP_000446768.1;Name=WP_000446768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459377.1;locus_tag=C9E95_RS21835;product=multidrug efflux MFS transporter;protein_id=WP_000446768.1;transl_table=11 NZ_PYJW01000187.1 RefSeq gene 12146 12406 . + . ID=gene-C9E95_RS21840;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=C9E95_RS21840;old_locus_tag=C9E95_22375 NZ_PYJW01000187.1 Protein Homology CDS 12146 12406 . + 0 ID=cds-WP_001518423.1;Parent=gene-C9E95_RS21840;Dbxref=GenBank:WP_001518423.1;Name=WP_001518423.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748986.1;locus_tag=C9E95_RS21840;product=anti-adapter protein IraP;protein_id=WP_001518423.1;transl_table=11 NZ_PYJW01000187.1 RefSeq gene 12759 13079 . + . ID=gene-C9E95_RS21845;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=C9E95_RS21845;old_locus_tag=C9E95_22380 NZ_PYJW01000187.1 Protein Homology CDS 12759 13079 . + 0 ID=cds-WP_023993788.1;Parent=gene-C9E95_RS21845;Dbxref=GenBank:WP_023993788.1;Name=WP_023993788.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459379.1;locus_tag=C9E95_RS21845;product=phosphate starvation-inducible protein PsiF;protein_id=WP_023993788.1;transl_table=11 NZ_PYJW01000187.1 RefSeq gene 13171 14283 . + . ID=gene-C9E95_RS21850;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=C9E95_RS21850;old_locus_tag=C9E95_22385 NZ_PYJW01000187.1 Protein Homology CDS 13171 14283 . + 0 ID=cds-WP_000484083.1;Parent=gene-C9E95_RS21850;Dbxref=GenBank:WP_000484083.1;Name=WP_000484083.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459380.1;locus_tag=C9E95_RS21850;product=diguanylate cyclase AdrA;protein_id=WP_000484083.1;transl_table=11 NZ_PYJW01000187.1 RefSeq gene 14298 15107 . - . ID=gene-C9E95_RS21855;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=C9E95_RS21855;old_locus_tag=C9E95_22390 NZ_PYJW01000187.1 Protein Homology CDS 14298 15107 . - 0 ID=cds-WP_000412193.1;Parent=gene-C9E95_RS21855;Dbxref=GenBank:WP_000412193.1;Name=WP_000412193.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459381.1;locus_tag=C9E95_RS21855;product=pyrroline-5-carboxylate reductase;protein_id=WP_000412193.1;transl_table=11 NZ_PYJW01000187.1 RefSeq gene 15247 15702 . + . ID=gene-C9E95_RS21860;Name=C9E95_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21860;old_locus_tag=C9E95_22395 NZ_PYJW01000187.1 Protein Homology CDS 15247 15702 . + 0 ID=cds-WP_080203937.1;Parent=gene-C9E95_RS21860;Dbxref=GenBank:WP_080203937.1;Name=WP_080203937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459382.1;locus_tag=C9E95_RS21860;product=YaiI/YqxD family protein;protein_id=WP_080203937.1;transl_table=11 NZ_PYJW01000187.1 RefSeq gene 15887 16432 . + . ID=gene-C9E95_RS21865;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=C9E95_RS21865;old_locus_tag=C9E95_22400 NZ_PYJW01000187.1 Protein Homology CDS 15887 16432 . + 0 ID=cds-WP_000983569.1;Parent=gene-C9E95_RS21865;Dbxref=GenBank:WP_000983569.1;Name=WP_000983569.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459383.1;locus_tag=C9E95_RS21865;product=shikimate kinase AroL;protein_id=WP_000983569.1;transl_table=11 NZ_PYJW01000187.1 RefSeq gene 16459 16650 . + . ID=gene-C9E95_RS21870;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=C9E95_RS21870;old_locus_tag=C9E95_22405 NZ_PYJW01000187.1 Protein Homology CDS 16459 16650 . + 0 ID=cds-WP_001143161.1;Parent=gene-C9E95_RS21870;Dbxref=GenBank:WP_001143161.1;Name=WP_001143161.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459384.1;locus_tag=C9E95_RS21870;product=protein YaiA;protein_id=WP_001143161.1;transl_table=11 NZ_PYJW01000187.1 RefSeq gene 16901 17578 . + . ID=gene-C9E95_RS21875;Name=C9E95_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21875;old_locus_tag=C9E95_22410 NZ_PYJW01000187.1 Protein Homology CDS 16901 17578 . + 0 ID=cds-WP_001276437.1;Parent=gene-C9E95_RS21875;Dbxref=GenBank:WP_001276437.1;Name=WP_001276437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459385.1;locus_tag=C9E95_RS21875;product=AroM family protein;protein_id=WP_001276437.1;transl_table=11 NZ_PYJW01000187.1 RefSeq gene 17649 17933 . + . ID=gene-C9E95_RS21880;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=C9E95_RS21880;old_locus_tag=C9E95_22415 NZ_PYJW01000187.1 Protein Homology CDS 17649 17933 . + 0 ID=cds-WP_000941945.1;Parent=gene-C9E95_RS21880;Dbxref=GenBank:WP_000941945.1;Name=WP_000941945.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459386.1;locus_tag=C9E95_RS21880;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_000941945.1;transl_table=11 NZ_PYJW01000187.1 RefSeq gene 17971 18882 . - . ID=gene-C9E95_RS21885;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=C9E95_RS21885;old_locus_tag=C9E95_22420 NZ_PYJW01000187.1 Protein Homology CDS 17971 18882 . - 0 ID=cds-WP_000964305.1;Parent=gene-C9E95_RS21885;Dbxref=GenBank:WP_000964305.1;Name=WP_000964305.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=C9E95_RS21885;product=recombination-associated protein RdgC;protein_id=WP_000964305.1;transl_table=11 NZ_PYJW01000187.1 RefSeq gene 19008 19916 . + . ID=gene-C9E95_RS21890;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=C9E95_RS21890;old_locus_tag=C9E95_22425 NZ_PYJW01000187.1 Protein Homology CDS 19008 19916 . + 0 ID=cds-WP_001219270.1;Parent=gene-C9E95_RS21890;Dbxref=GenBank:WP_001219270.1;Name=WP_001219270.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459388.1;locus_tag=C9E95_RS21890;product=fructokinase;protein_id=WP_001219270.1;transl_table=11 NZ_PYJW01000187.1 RefSeq gene 19938 21110 . - . ID=gene-C9E95_RS21895;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=C9E95_RS21895;old_locus_tag=C9E95_22430 NZ_PYJW01000187.1 Protein Homology CDS 19938 21110 . - 0 ID=cds-WP_000755630.1;Parent=gene-C9E95_RS21895;Dbxref=GenBank:WP_000755630.1;Name=WP_000755630.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459389.1;locus_tag=C9E95_RS21895;product=MFS transporter AraJ;protein_id=WP_000755630.1;transl_table=11 NZ_PYJW01000187.1 RefSeq gene 21283 24423 . - . ID=gene-C9E95_RS21900;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=C9E95_RS21900;old_locus_tag=C9E95_22435 NZ_PYJW01000187.1 Protein Homology CDS 21283 24423 . - 0 ID=cds-WP_080203938.1;Parent=gene-C9E95_RS21900;Dbxref=GenBank:WP_080203938.1;Name=WP_080203938.1;Ontology_term=GO:0006260,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459390.1;locus_tag=C9E95_RS21900;product=exonuclease subunit SbcC;protein_id=WP_080203938.1;transl_table=11 NZ_PYJW01000187.1 RefSeq gene 24420 25622 . - . ID=gene-C9E95_RS21905;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=C9E95_RS21905;old_locus_tag=C9E95_22440 NZ_PYJW01000187.1 Protein Homology CDS 24420 25622 . - 0 ID=cds-WP_080203939.1;Parent=gene-C9E95_RS21905;Dbxref=GenBank:WP_080203939.1;Name=WP_080203939.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459391.1;locus_tag=C9E95_RS21905;product=exonuclease subunit SbcD;protein_id=WP_080203939.1;transl_table=11 NZ_PYJW01000187.1 RefSeq gene 25837 26526 . + . ID=gene-C9E95_RS21910;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=C9E95_RS21910;old_locus_tag=C9E95_22445 NZ_PYJW01000187.1 Protein Homology CDS 25837 26526 . + 0 ID=cds-WP_000113918.1;Parent=gene-C9E95_RS21910;Dbxref=GenBank:WP_000113918.1;Name=WP_000113918.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=C9E95_RS21910;product=phosphate response regulator transcription factor PhoB;protein_id=WP_000113918.1;transl_table=11 NZ_PYJW01000187.1 RefSeq gene 26596 27891 . + . ID=gene-C9E95_RS21915;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=C9E95_RS21915;old_locus_tag=C9E95_22450 NZ_PYJW01000187.1 Protein Homology CDS 26596 27891 . + 0 ID=cds-WP_000893642.1;Parent=gene-C9E95_RS21915;Dbxref=GenBank:WP_000893642.1;Name=WP_000893642.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459393.1;locus_tag=C9E95_RS21915;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_000893642.1;transl_table=11 NZ_PYJW01000187.1 RefSeq gene 28300 29619 . + . ID=gene-C9E95_RS21920;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=C9E95_RS21920;old_locus_tag=C9E95_22455 NZ_PYJW01000187.1 Protein Homology CDS 28300 29619 . + 0 ID=cds-WP_000149625.1;Parent=gene-C9E95_RS21920;Dbxref=GenBank:WP_000149625.1;Name=WP_000149625.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459394.1;locus_tag=C9E95_RS21920;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_000149625.1;transl_table=11 ##sequence-region NZ_PYJW01000115.1 1 102148 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000115.1 RefSeq region 1 102148 . + . ID=NZ_PYJW01000115.1:1..102148;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000115.1 RefSeq gene 90 716 . + . ID=gene-C9E95_RS12065;Name=C9E95_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12065;old_locus_tag=C9E95_12375 NZ_PYJW01000115.1 Protein Homology CDS 90 716 . + 0 ID=cds-WP_000753270.1;Parent=gene-C9E95_RS12065;Dbxref=GenBank:WP_000753270.1;Name=WP_000753270.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006892400.1;locus_tag=C9E95_RS12065;product=fimbrial protein;protein_id=WP_000753270.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 860 1603 . + . ID=gene-C9E95_RS12070;Name=C9E95_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12070;old_locus_tag=C9E95_12380 NZ_PYJW01000115.1 Protein Homology CDS 860 1603 . + 0 ID=cds-WP_000882257.1;Parent=gene-C9E95_RS12070;Dbxref=GenBank:WP_000882257.1;Name=WP_000882257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000882257.1;locus_tag=C9E95_RS12070;product=fimbrial chaperone;protein_id=WP_000882257.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 1624 4224 . + . ID=gene-C9E95_RS12075;Name=C9E95_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12075;old_locus_tag=C9E95_12385 NZ_PYJW01000115.1 Protein Homology CDS 1624 4224 . + 0 ID=cds-WP_001747525.1;Parent=gene-C9E95_RS12075;Dbxref=GenBank:WP_001747525.1;Name=WP_001747525.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747525.1;locus_tag=C9E95_RS12075;product=outer membrane usher protein;protein_id=WP_001747525.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 4238 4822 . + . ID=gene-C9E95_RS12080;Name=C9E95_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12080;old_locus_tag=C9E95_12390 NZ_PYJW01000115.1 Protein Homology CDS 4238 4822 . + 0 ID=cds-WP_039590871.1;Parent=gene-C9E95_RS12080;Dbxref=GenBank:WP_039590871.1;Name=WP_039590871.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006892398.1;locus_tag=C9E95_RS12080;product=fimbrial protein;protein_id=WP_039590871.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 4837 5445 . + . ID=gene-C9E95_RS12085;Name=C9E95_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12085;old_locus_tag=C9E95_12395 NZ_PYJW01000115.1 Protein Homology CDS 4837 5445 . + 0 ID=cds-WP_001080417.1;Parent=gene-C9E95_RS12085;Dbxref=GenBank:WP_001080417.1;Name=WP_001080417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001080417.1;locus_tag=C9E95_RS12085;product=fimbrial protein;protein_id=WP_001080417.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 5461 6054 . + . ID=gene-C9E95_RS12090;Name=C9E95_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12090;old_locus_tag=C9E95_12400 NZ_PYJW01000115.1 Protein Homology CDS 5461 6054 . + 0 ID=cds-WP_000957977.1;Parent=gene-C9E95_RS12090;Dbxref=GenBank:WP_000957977.1;Name=WP_000957977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000957977.1;locus_tag=C9E95_RS12090;product=fimbrial-like protein;protein_id=WP_000957977.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 6078 7307 . + . ID=gene-C9E95_RS12095;Name=C9E95_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12095;old_locus_tag=C9E95_12405 NZ_PYJW01000115.1 Protein Homology CDS 6078 7307 . + 0 ID=cds-WP_000152783.1;Parent=gene-C9E95_RS12095;Dbxref=GenBank:WP_000152783.1;Name=WP_000152783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006892393.1;locus_tag=C9E95_RS12095;product=fimbrial-like adhesin;protein_id=WP_000152783.1;transl_table=11 NZ_PYJW01000115.1 RefSeq pseudogene 7650 7784 . + . ID=gene-C9E95_RS23760;Name=C9E95_RS23760;end_range=7784,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23760;partial=true;pseudo=true NZ_PYJW01000115.1 Protein Homology CDS 7650 7784 . + 0 ID=cds-C9E95_RS23760;Parent=gene-C9E95_RS23760;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=7784,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004149226.1;locus_tag=C9E95_RS23760;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJW01000115.1 RefSeq pseudogene 7888 8057 . - . ID=gene-C9E95_RS23500;Name=C9E95_RS23500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23500;old_locus_tag=C9E95_12410;partial=true;pseudo=true;start_range=.,7888 NZ_PYJW01000115.1 Protein Homology CDS 7888 8057 . - 0 ID=cds-C9E95_RS23500;Parent=gene-C9E95_RS23500;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611197.1;locus_tag=C9E95_RS23500;partial=true;product=transposase;pseudo=true;start_range=.,7888;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 8108 8266 . - . ID=gene-C9E95_RS23665;Name=C9E95_RS23665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23665 NZ_PYJW01000115.1 Protein Homology CDS 8108 8266 . - 0 ID=cds-WP_342365454.1;Parent=gene-C9E95_RS23665;Dbxref=GenBank:WP_342365454.1;Name=WP_342365454.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024750.6;locus_tag=C9E95_RS23665;product=Arm DNA-binding domain-containing protein;protein_id=WP_342365454.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 8494 8588 . - . ID=gene-C9E95_RS12105;Name=C9E95_RS12105;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS12105;old_locus_tag=C9E95_12415 NZ_PYJW01000115.1 tRNAscan-SE tRNA 8494 8588 . - . ID=rna-C9E95_RS12105;Parent=gene-C9E95_RS12105;anticodon=(pos:complement(8552..8554));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS12105;product=tRNA-Sec NZ_PYJW01000115.1 tRNAscan-SE exon 8494 8588 . - . ID=exon-C9E95_RS12105-1;Parent=rna-C9E95_RS12105;anticodon=(pos:complement(8552..8554));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS12105;product=tRNA-Sec NZ_PYJW01000115.1 RefSeq gene 8876 10258 . + . ID=gene-C9E95_RS12110;Name=C9E95_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12110;old_locus_tag=C9E95_12420 NZ_PYJW01000115.1 Protein Homology CDS 8876 10258 . + 0 ID=cds-WP_000834259.1;Parent=gene-C9E95_RS12110;Dbxref=GenBank:WP_000834259.1;Name=WP_000834259.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462650.1;locus_tag=C9E95_RS12110;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_000834259.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 10270 12588 . + . ID=gene-C9E95_RS12115;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=C9E95_RS12115;old_locus_tag=C9E95_12425 NZ_PYJW01000115.1 Protein Homology CDS 10270 12588 . + 0 ID=cds-WP_061378865.1;Parent=gene-C9E95_RS12115;Dbxref=GenBank:WP_061378865.1;Name=WP_061378865.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462649.1;locus_tag=C9E95_RS12115;product=alpha-xylosidase;protein_id=WP_061378865.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 12691 14400 . - . ID=gene-C9E95_RS12120;Name=C9E95_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12120;old_locus_tag=C9E95_12430 NZ_PYJW01000115.1 Protein Homology CDS 12691 14400 . - 0 ID=cds-WP_061378864.1;Parent=gene-C9E95_RS12120;Dbxref=GenBank:WP_061378864.1;Name=WP_061378864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462648.1;locus_tag=C9E95_RS12120;product=AsmA family protein;protein_id=WP_061378864.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 14521 15912 . - . ID=gene-C9E95_RS12125;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=C9E95_RS12125;old_locus_tag=C9E95_12435 NZ_PYJW01000115.1 Protein Homology CDS 14521 15912 . - 0 ID=cds-WP_000115428.1;Parent=gene-C9E95_RS12125;Dbxref=GenBank:WP_000115428.1;Name=WP_000115428.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462647.1;locus_tag=C9E95_RS12125;product=xanthine/proton symporter XanP;protein_id=WP_000115428.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 16140 17345 . + . ID=gene-C9E95_RS12130;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=C9E95_RS12130;old_locus_tag=C9E95_12440 NZ_PYJW01000115.1 Protein Homology CDS 16140 17345 . + 0 ID=cds-WP_000462250.1;Parent=gene-C9E95_RS12130;Dbxref=GenBank:WP_000462250.1;Name=WP_000462250.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507315.1;locus_tag=C9E95_RS12130;product=sodium/glutamate symporter;protein_id=WP_000462250.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 17381 19462 . - . ID=gene-C9E95_RS12135;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=C9E95_RS12135;old_locus_tag=C9E95_12445 NZ_PYJW01000115.1 Protein Homology CDS 17381 19462 . - 0 ID=cds-WP_000016747.1;Parent=gene-C9E95_RS12135;Dbxref=GenBank:WP_000016747.1;Name=WP_000016747.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462644.1;locus_tag=C9E95_RS12135;product=ATP-dependent DNA helicase RecG;protein_id=WP_000016747.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 19468 20157 . - . ID=gene-C9E95_RS12140;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=C9E95_RS12140;old_locus_tag=C9E95_12450 NZ_PYJW01000115.1 Protein Homology CDS 19468 20157 . - 0 ID=cds-WP_001068436.1;Parent=gene-C9E95_RS12140;Dbxref=GenBank:WP_001068436.1;Name=WP_001068436.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462643.1;locus_tag=C9E95_RS12140;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_001068436.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 20162 22273 . - . ID=gene-C9E95_RS12145;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=C9E95_RS12145;old_locus_tag=C9E95_12455 NZ_PYJW01000115.1 Protein Homology CDS 20162 22273 . - 0 ID=cds-WP_000280481.1;Parent=gene-C9E95_RS12145;Dbxref=GenBank:WP_000280481.1;Name=WP_000280481.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=C9E95_RS12145;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_000280481.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 22292 22567 . - . ID=gene-C9E95_RS12150;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=C9E95_RS12150;old_locus_tag=C9E95_12460 NZ_PYJW01000115.1 Protein Homology CDS 22292 22567 . - 0 ID=cds-WP_000135058.1;Parent=gene-C9E95_RS12150;Dbxref=GenBank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=C9E95_RS12150;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 22622 23245 . - . ID=gene-C9E95_RS12155;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=C9E95_RS12155;old_locus_tag=C9E95_12465 NZ_PYJW01000115.1 Protein Homology CDS 22622 23245 . - 0 ID=cds-WP_000046966.1;Parent=gene-C9E95_RS12155;Dbxref=GenBank:WP_000046966.1;Name=WP_000046966.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=C9E95_RS12155;product=guanylate kinase;protein_id=WP_000046966.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 23502 25187 . + . ID=gene-C9E95_RS12160;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=C9E95_RS12160;old_locus_tag=C9E95_12470 NZ_PYJW01000115.1 Protein Homology CDS 23502 25187 . + 0 ID=cds-WP_080203801.1;Parent=gene-C9E95_RS12160;Dbxref=GenBank:WP_080203801.1;Name=WP_080203801.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=C9E95_RS12160;product=NAD-dependent DNA ligase LigB;protein_id=WP_080203801.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 25184 25801 . - . ID=gene-C9E95_RS12165;Name=C9E95_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12165;old_locus_tag=C9E95_12475 NZ_PYJW01000115.1 Protein Homology CDS 25184 25801 . - 0 ID=cds-WP_000924334.1;Parent=gene-C9E95_RS12165;Dbxref=GenBank:WP_000924334.1;Name=WP_000924334.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462638.1;locus_tag=C9E95_RS12165;product=trimeric intracellular cation channel family protein;protein_id=WP_000924334.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 26052 26933 . - . ID=gene-C9E95_RS12170;Name=C9E95_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12170;old_locus_tag=C9E95_12480 NZ_PYJW01000115.1 Protein Homology CDS 26052 26933 . - 0 ID=cds-WP_001082966.1;Parent=gene-C9E95_RS12170;Dbxref=GenBank:WP_001082966.1;Name=WP_001082966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462637.1;locus_tag=C9E95_RS12170;product=HARLDQ motif MBL-fold protein;protein_id=WP_001082966.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 27007 27909 . + . ID=gene-C9E95_RS12175;Name=C9E95_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12175;old_locus_tag=C9E95_12485 NZ_PYJW01000115.1 Protein Homology CDS 27007 27909 . + 0 ID=cds-WP_001050859.1;Parent=gene-C9E95_RS12175;Dbxref=GenBank:WP_001050859.1;Name=WP_001050859.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462636.1;locus_tag=C9E95_RS12175;product=LysR family transcriptional regulator;protein_id=WP_001050859.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 27959 28822 . - . ID=gene-C9E95_RS12180;Name=C9E95_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12180;old_locus_tag=C9E95_12490 NZ_PYJW01000115.1 Protein Homology CDS 27959 28822 . - 0 ID=cds-WP_000621352.1;Parent=gene-C9E95_RS12180;Dbxref=GenBank:WP_000621352.1;Name=WP_000621352.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=C9E95_RS12180;product=YicC/YloC family endoribonuclease;protein_id=WP_000621352.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 28948 29664 . + . ID=gene-C9E95_RS12185;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=C9E95_RS12185;old_locus_tag=C9E95_12500 NZ_PYJW01000115.1 Protein Homology CDS 28948 29664 . + 0 ID=cds-WP_001247078.1;Parent=gene-C9E95_RS12185;Dbxref=GenBank:WP_001247078.1;Name=WP_001247078.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=C9E95_RS12185;product=ribonuclease PH;protein_id=WP_001247078.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 29743 30384 . + . ID=gene-C9E95_RS12190;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=C9E95_RS12190;old_locus_tag=C9E95_12505 NZ_PYJW01000115.1 Protein Homology CDS 29743 30384 . + 0 ID=cds-WP_000806167.1;Parent=gene-C9E95_RS12190;Dbxref=GenBank:WP_000806167.1;Name=WP_000806167.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=C9E95_RS12190;product=orotate phosphoribosyltransferase;protein_id=WP_000806167.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 30462 31058 . - . ID=gene-C9E95_RS12195;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=C9E95_RS12195;old_locus_tag=C9E95_12510 NZ_PYJW01000115.1 Protein Homology CDS 30462 31058 . - 0 ID=cds-WP_000818607.1;Parent=gene-C9E95_RS12195;Dbxref=GenBank:WP_000818607.1;Name=WP_000818607.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=C9E95_RS12195;product=nucleoid occlusion factor SlmA;protein_id=WP_000818607.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 31166 31624 . - . ID=gene-C9E95_RS12200;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=C9E95_RS12200;old_locus_tag=C9E95_12515 NZ_PYJW01000115.1 Protein Homology CDS 31166 31624 . - 0 ID=cds-WP_000976078.1;Parent=gene-C9E95_RS12200;Dbxref=GenBank:WP_000976078.1;Name=WP_000976078.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=C9E95_RS12200;product=dUTP diphosphatase;protein_id=WP_000976078.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 31602 32822 . - . ID=gene-C9E95_RS12205;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=C9E95_RS12205;old_locus_tag=C9E95_12520 NZ_PYJW01000115.1 Protein Homology CDS 31602 32822 . - 0 ID=cds-WP_111769753.1;Parent=gene-C9E95_RS12205;Dbxref=GenBank:WP_111769753.1;Name=WP_111769753.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=C9E95_RS12205;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_111769753.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 32998 33663 . + . ID=gene-C9E95_RS12210;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=C9E95_RS12210;old_locus_tag=C9E95_12525 NZ_PYJW01000115.1 Protein Homology CDS 32998 33663 . + 0 ID=cds-WP_000380129.1;Parent=gene-C9E95_RS12210;Dbxref=GenBank:WP_000380129.1;Name=WP_000380129.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462629.1;locus_tag=C9E95_RS12210;product=RadC family protein;protein_id=WP_000380129.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 33881 34117 . + . ID=gene-C9E95_RS12215;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=C9E95_RS12215;old_locus_tag=C9E95_12530 NZ_PYJW01000115.1 Protein Homology CDS 33881 34117 . + 0 ID=cds-WP_001519051.1;Parent=gene-C9E95_RS12215;Dbxref=GenBank:WP_001519051.1;Name=WP_001519051.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=C9E95_RS12215;product=50S ribosomal protein L28;protein_id=WP_001519051.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 34138 34305 . + . ID=gene-C9E95_RS12220;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=C9E95_RS12220;old_locus_tag=C9E95_12535 NZ_PYJW01000115.1 Protein Homology CDS 34138 34305 . + 0 ID=cds-WP_001051798.1;Parent=gene-C9E95_RS12220;Dbxref=GenBank:WP_001051798.1;Name=WP_001051798.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=C9E95_RS12220;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 34403 35212 . + . ID=gene-C9E95_RS12225;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=C9E95_RS12225;old_locus_tag=C9E95_12540 NZ_PYJW01000115.1 Protein Homology CDS 34403 35212 . + 0 ID=cds-WP_023993464.1;Parent=gene-C9E95_RS12225;Dbxref=GenBank:WP_023993464.1;Name=WP_023993464.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462626.1;locus_tag=C9E95_RS12225;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_023993464.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 35240 35719 . - . ID=gene-C9E95_RS12230;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=C9E95_RS12230;old_locus_tag=C9E95_12545 NZ_PYJW01000115.1 Protein Homology CDS 35240 35719 . - 0 ID=cds-WP_001171884.1;Parent=gene-C9E95_RS12230;Dbxref=GenBank:WP_001171884.1;Name=WP_001171884.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462625.1;locus_tag=C9E95_RS12230;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001171884.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 35728 37005 . - . ID=gene-C9E95_RS12235;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=C9E95_RS12235;old_locus_tag=C9E95_12550 NZ_PYJW01000115.1 Protein Homology CDS 35728 37005 . - 0 ID=cds-WP_023993465.1;Parent=gene-C9E95_RS12235;Dbxref=GenBank:WP_023993465.1;Name=WP_023993465.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462624.1;locus_tag=C9E95_RS12235;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_023993465.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 37414 38484 . + . ID=gene-C9E95_RS12240;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=C9E95_RS12240;old_locus_tag=C9E95_12555 NZ_PYJW01000115.1 Protein Homology CDS 37414 38484 . + 0 ID=cds-WP_080203799.1;Parent=gene-C9E95_RS12240;Dbxref=GenBank:WP_080203799.1;Name=WP_080203799.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521713.1;locus_tag=C9E95_RS12240;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WP_080203799.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 38481 39605 . + . ID=gene-C9E95_RS12245;Name=C9E95_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12245;old_locus_tag=C9E95_12560 NZ_PYJW01000115.1 Protein Homology CDS 38481 39605 . + 0 ID=cds-WP_023993466.1;Parent=gene-C9E95_RS12245;Dbxref=GenBank:WP_023993466.1;Name=WP_023993466.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462622.1;locus_tag=C9E95_RS12245;product=glycosyltransferase family 4 protein;protein_id=WP_023993466.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 39598 40395 . + . ID=gene-C9E95_RS12250;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=C9E95_RS12250;old_locus_tag=C9E95_12565 NZ_PYJW01000115.1 Protein Homology CDS 39598 40395 . + 0 ID=cds-WP_000229825.1;Parent=gene-C9E95_RS12250;Dbxref=GenBank:WP_000229825.1;Name=WP_000229825.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462621.1;locus_tag=C9E95_RS12250;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WP_000229825.1;transl_table=11 NZ_PYJW01000115.1 RefSeq pseudogene 40451 40612 . + . ID=gene-C9E95_RS12255;Name=C9E95_RS12255;end_range=40612,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS12255;old_locus_tag=C9E95_12570;partial=true;pseudo=true NZ_PYJW01000115.1 Protein Homology CDS 40451 40612 . + 0 ID=cds-C9E95_RS12255;Parent=gene-C9E95_RS12255;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=40612,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280096.1;locus_tag=C9E95_RS12255;partial=true;product=glycosyltransferase family 8 protein;pseudo=true;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 40730 41809 . + . ID=gene-C9E95_RS12265;Name=waaB;gbkey=Gene;gene=waaB;gene_biotype=protein_coding;gene_synonym=rfaB;locus_tag=C9E95_RS12265;old_locus_tag=C9E95_12580 NZ_PYJW01000115.1 Protein Homology CDS 40730 41809 . + 0 ID=cds-WP_023993467.1;Parent=gene-C9E95_RS12265;Dbxref=GenBank:WP_023993467.1;Name=WP_023993467.1;gbkey=CDS;gene=waaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462619.1;locus_tag=C9E95_RS12265;product=lipopolysaccharide 1%2C6-galactosyltransferase;protein_id=WP_023993467.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 41815 42828 . + . ID=gene-C9E95_RS12270;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=C9E95_RS12270;old_locus_tag=C9E95_12585 NZ_PYJW01000115.1 Protein Homology CDS 41815 42828 . + 0 ID=cds-WP_023193300.1;Parent=gene-C9E95_RS12270;Dbxref=GenBank:WP_023193300.1;Name=WP_023193300.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462618.1;locus_tag=C9E95_RS12270;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WP_023193300.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 42846 43859 . + . ID=gene-C9E95_RS12275;Name=rfaJ;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=C9E95_RS12275;old_locus_tag=C9E95_12590 NZ_PYJW01000115.1 Protein Homology CDS 42846 43859 . + 0 ID=cds-WP_024157567.1;Parent=gene-C9E95_RS12275;Dbxref=GenBank:WP_024157567.1;Name=WP_024157567.1;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462617.1;locus_tag=C9E95_RS12275;product=lipopolysaccharide 1%2C2-glucosyltransferase RfaJ;protein_id=WP_024157567.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 43882 44580 . + . ID=gene-C9E95_RS12280;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=C9E95_RS12280;old_locus_tag=C9E95_12595 NZ_PYJW01000115.1 Protein Homology CDS 43882 44580 . + 0 ID=cds-WP_020838487.1;Parent=gene-C9E95_RS12280;Dbxref=GenBank:WP_020838487.1;Name=WP_020838487.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462616.1;locus_tag=C9E95_RS12280;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_020838487.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 44730 45539 . + . ID=gene-C9E95_RS12285;Name=waaZ;gbkey=Gene;gene=waaZ;gene_biotype=protein_coding;locus_tag=C9E95_RS12285;old_locus_tag=C9E95_12600 NZ_PYJW01000115.1 Protein Homology CDS 44730 45539 . + 0 ID=cds-WP_000536017.1;Parent=gene-C9E95_RS12285;Dbxref=GenBank:WP_000536017.1;Name=WP_000536017.1;gbkey=CDS;gene=waaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462615.1;locus_tag=C9E95_RS12285;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;protein_id=WP_000536017.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 45639 46784 . + . ID=gene-C9E95_RS12290;Name=C9E95_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12290;old_locus_tag=C9E95_12605 NZ_PYJW01000115.1 Protein Homology CDS 45639 46784 . + 0 ID=cds-WP_000591834.1;Parent=gene-C9E95_RS12290;Dbxref=GenBank:WP_000591834.1;Name=WP_000591834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462614.1;locus_tag=C9E95_RS12290;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=WP_000591834.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 46841 48055 . - . ID=gene-C9E95_RS12295;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=protein_coding;locus_tag=C9E95_RS12295;old_locus_tag=C9E95_12610 NZ_PYJW01000115.1 Protein Homology CDS 46841 48055 . - 0 ID=cds-WP_080203798.1;Parent=gene-C9E95_RS12295;Dbxref=GenBank:WP_080203798.1;Name=WP_080203798.1;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462613.1;locus_tag=C9E95_RS12295;product=O-antigen ligase RfaL;protein_id=WP_080203798.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 48095 49048 . - . ID=gene-C9E95_RS12300;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=C9E95_RS12300;old_locus_tag=C9E95_12615 NZ_PYJW01000115.1 Protein Homology CDS 48095 49048 . - 0 ID=cds-WP_001264617.1;Parent=gene-C9E95_RS12300;Dbxref=GenBank:WP_001264617.1;Name=WP_001264617.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462612.1;locus_tag=C9E95_RS12300;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_001264617.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 49048 50094 . - . ID=gene-C9E95_RS12305;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=C9E95_RS12305;old_locus_tag=C9E95_12620 NZ_PYJW01000115.1 Protein Homology CDS 49048 50094 . - 0 ID=cds-WP_080203797.1;Parent=gene-C9E95_RS12305;Dbxref=GenBank:WP_080203797.1;Name=WP_080203797.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462611.1;locus_tag=C9E95_RS12305;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_080203797.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 50097 51029 . - . ID=gene-C9E95_RS12310;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=C9E95_RS12310;old_locus_tag=C9E95_12625 NZ_PYJW01000115.1 Protein Homology CDS 50097 51029 . - 0 ID=cds-WP_000587771.1;Parent=gene-C9E95_RS12310;Dbxref=GenBank:WP_000587771.1;Name=WP_000587771.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=C9E95_RS12310;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_000587771.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 51232 52428 . + . ID=gene-C9E95_RS12315;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=C9E95_RS12315;old_locus_tag=C9E95_12630 NZ_PYJW01000115.1 Protein Homology CDS 51232 52428 . + 0 ID=cds-WP_001213800.1;Parent=gene-C9E95_RS12315;Dbxref=GenBank:WP_001213800.1;Name=WP_001213800.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=C9E95_RS12315;product=glycine C-acetyltransferase;protein_id=WP_001213800.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 52438 53463 . + . ID=gene-C9E95_RS12320;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=C9E95_RS12320;old_locus_tag=C9E95_12635 NZ_PYJW01000115.1 Protein Homology CDS 52438 53463 . + 0 ID=cds-WP_080203796.1;Parent=gene-C9E95_RS12320;Dbxref=GenBank:WP_080203796.1;Name=WP_080203796.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=C9E95_RS12320;product=L-threonine 3-dehydrogenase;protein_id=WP_080203796.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 53757 54791 . + . ID=gene-C9E95_RS12325;Name=C9E95_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12325;old_locus_tag=C9E95_12640 NZ_PYJW01000115.1 Protein Homology CDS 53757 54791 . + 0 ID=cds-WP_080203795.1;Parent=gene-C9E95_RS12325;Dbxref=GenBank:WP_080203795.1;Name=WP_080203795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462607.1;locus_tag=C9E95_RS12325;product=glycosyltransferase;protein_id=WP_080203795.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 54778 55740 . - . ID=gene-C9E95_RS12330;Name=C9E95_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12330;old_locus_tag=C9E95_12645 NZ_PYJW01000115.1 Protein Homology CDS 54778 55740 . - 0 ID=cds-WP_080203794.1;Parent=gene-C9E95_RS12330;Dbxref=GenBank:WP_080203794.1;Name=WP_080203794.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462606.1;locus_tag=C9E95_RS12330;product=divergent polysaccharide deacetylase family protein;protein_id=WP_080203794.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 55744 57003 . - . ID=gene-C9E95_RS12335;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=C9E95_RS12335;old_locus_tag=C9E95_12650 NZ_PYJW01000115.1 Protein Homology CDS 55744 57003 . - 0 ID=cds-WP_058814511.1;Parent=gene-C9E95_RS12335;Dbxref=GenBank:WP_058814511.1;Name=WP_058814511.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=C9E95_RS12335;product=murein hydrolase activator EnvC;protein_id=WP_058814511.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 57037 58581 . - . ID=gene-C9E95_RS12340;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=C9E95_RS12340;old_locus_tag=C9E95_12655 NZ_PYJW01000115.1 Protein Homology CDS 57037 58581 . - 0 ID=cds-WP_000116576.1;Parent=gene-C9E95_RS12340;Dbxref=GenBank:WP_000116576.1;Name=WP_000116576.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=C9E95_RS12340;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_000116576.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 58829 59260 . + . ID=gene-C9E95_RS12345;Name=C9E95_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12345;old_locus_tag=C9E95_12660 NZ_PYJW01000115.1 Protein Homology CDS 58829 59260 . + 0 ID=cds-WP_001156179.1;Parent=gene-C9E95_RS12345;Dbxref=GenBank:WP_001156179.1;Name=WP_001156179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462603.1;locus_tag=C9E95_RS12345;product=rhodanese-like domain-containing protein;protein_id=WP_001156179.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 59346 59597 . + . ID=gene-C9E95_RS12350;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=C9E95_RS12350;old_locus_tag=C9E95_12665 NZ_PYJW01000115.1 Protein Homology CDS 59346 59597 . + 0 ID=cds-WP_001273795.1;Parent=gene-C9E95_RS12350;Dbxref=GenBank:WP_001273795.1;Name=WP_001273795.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462602.1;locus_tag=C9E95_RS12350;product=glutaredoxin 3;protein_id=WP_001273795.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 59641 60108 . + . ID=gene-C9E95_RS12355;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=C9E95_RS12355;old_locus_tag=C9E95_12670 NZ_PYJW01000115.1 Protein Homology CDS 59641 60108 . + 0 ID=cds-WP_000003370.1;Parent=gene-C9E95_RS12355;Dbxref=GenBank:WP_000003370.1;Name=WP_000003370.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=C9E95_RS12355;product=protein-export chaperone SecB;protein_id=WP_000003370.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 60108 61127 . + . ID=gene-C9E95_RS12360;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=C9E95_RS12360;old_locus_tag=C9E95_12675 NZ_PYJW01000115.1 Protein Homology CDS 60108 61127 . + 0 ID=cds-WP_001076596.1;Parent=gene-C9E95_RS12360;Dbxref=GenBank:WP_001076596.1;Name=WP_001076596.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462600.1;locus_tag=C9E95_RS12360;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001076596.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 61205 62026 . + . ID=gene-C9E95_RS12365;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=C9E95_RS12365;old_locus_tag=C9E95_12680 NZ_PYJW01000115.1 Protein Homology CDS 61205 62026 . + 0 ID=cds-WP_001112113.1;Parent=gene-C9E95_RS12365;Dbxref=GenBank:WP_001112113.1;Name=WP_001112113.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=C9E95_RS12365;product=serine O-acetyltransferase;protein_id=WP_001112113.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 62109 63419 . - . ID=gene-C9E95_RS12370;Name=C9E95_RS12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12370;old_locus_tag=C9E95_12685 NZ_PYJW01000115.1 Protein Homology CDS 62109 63419 . - 0 ID=cds-WP_001092104.1;Parent=gene-C9E95_RS12370;Dbxref=GenBank:WP_001092104.1;Name=WP_001092104.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462598.1;locus_tag=C9E95_RS12370;product=MFS transporter;protein_id=WP_001092104.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 63493 64689 . - . ID=gene-C9E95_RS12375;Name=C9E95_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12375;old_locus_tag=C9E95_12690 NZ_PYJW01000115.1 Protein Homology CDS 63493 64689 . - 0 ID=cds-WP_001218249.1;Parent=gene-C9E95_RS12375;Dbxref=GenBank:WP_001218249.1;Name=WP_001218249.1;Ontology_term=GO:0046392,GO:1903663,GO:0008867,GO:1990594;gbkey=CDS;go_function=galactarate dehydratase activity|0008867||IEA,L-altrarate dehydratase activity|1990594||IEA;go_process=galactarate catabolic process|0046392||IEA,L-altrarate catabolic process|1903663||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462597.1;locus_tag=C9E95_RS12375;product=L-talarate/galactarate dehydratase;protein_id=WP_001218249.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 65008 66012 . + . ID=gene-C9E95_RS12380;Name=C9E95_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12380;old_locus_tag=C9E95_12700 NZ_PYJW01000115.1 Protein Homology CDS 65008 66012 . + 0 ID=cds-WP_001537635.1;Parent=gene-C9E95_RS12380;Dbxref=GenBank:WP_001537635.1;Name=WP_001537635.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462596.1;locus_tag=C9E95_RS12380;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_001537635.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 66080 66553 . - . ID=gene-C9E95_RS12385;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=C9E95_RS12385;old_locus_tag=C9E95_12705 NZ_PYJW01000115.1 Protein Homology CDS 66080 66553 . - 0 ID=cds-WP_000932335.1;Parent=gene-C9E95_RS12385;Dbxref=GenBank:WP_000932335.1;Name=WP_000932335.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=C9E95_RS12385;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_000932335.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 66618 67808 . - . ID=gene-C9E95_RS12390;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=C9E95_RS12390;old_locus_tag=C9E95_12710 NZ_PYJW01000115.1 Protein Homology CDS 66618 67808 . - 0 ID=cds-WP_000586988.1;Parent=gene-C9E95_RS12390;Dbxref=GenBank:WP_000586988.1;Name=WP_000586988.1;gbkey=CDS;gene=lldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=C9E95_RS12390;product=quinone-dependent L-lactate dehydrogenase;protein_id=WP_000586988.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 67805 68581 . - . ID=gene-C9E95_RS12395;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=C9E95_RS12395;old_locus_tag=C9E95_12715 NZ_PYJW01000115.1 Protein Homology CDS 67805 68581 . - 0 ID=cds-WP_001650988.1;Parent=gene-C9E95_RS12395;Dbxref=GenBank:WP_001650988.1;Name=WP_001650988.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462593.1;locus_tag=C9E95_RS12395;product=transcriptional regulator LldR;protein_id=WP_001650988.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 68578 70233 . - . ID=gene-C9E95_RS12400;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=C9E95_RS12400;old_locus_tag=C9E95_12720 NZ_PYJW01000115.1 Protein Homology CDS 68578 70233 . - 0 ID=cds-WP_080203792.1;Parent=gene-C9E95_RS12400;Dbxref=GenBank:WP_080203792.1;Name=WP_080203792.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462592.1;locus_tag=C9E95_RS12400;product=L-lactate permease;protein_id=WP_080203792.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 70532 74917 . - . ID=gene-C9E95_RS12405;Name=sadA;gbkey=Gene;gene=sadA;gene_biotype=protein_coding;locus_tag=C9E95_RS12405;old_locus_tag=C9E95_12725 NZ_PYJW01000115.1 Protein Homology CDS 70532 74917 . - 0 ID=cds-WP_001079610.1;Parent=gene-C9E95_RS12405;Dbxref=GenBank:WP_001079610.1;Name=WP_001079610.1;gbkey=CDS;gene=sadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462591.1;locus_tag=C9E95_RS12405;product=trimeric autotransporter adhesin SadA;protein_id=WP_001079610.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 74961 75644 . - . ID=gene-C9E95_RS12410;Name=C9E95_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12410;old_locus_tag=C9E95_12730 NZ_PYJW01000115.1 Protein Homology CDS 74961 75644 . - 0 ID=cds-WP_000549457.1;Parent=gene-C9E95_RS12410;Dbxref=GenBank:WP_000549457.1;Name=WP_000549457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462590.1;locus_tag=C9E95_RS12410;product=DUF3251 domain-containing protein;protein_id=WP_000549457.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 76133 76495 . - . ID=gene-C9E95_RS12415;Name=C9E95_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12415;old_locus_tag=C9E95_12735 NZ_PYJW01000115.1 Protein Homology CDS 76133 76495 . - 0 ID=cds-WP_000665687.1;Parent=gene-C9E95_RS12415;Dbxref=GenBank:WP_000665687.1;Name=WP_000665687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462589.1;locus_tag=C9E95_RS12415;product=YibL family ribosome-associated protein;protein_id=WP_000665687.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 76785 76994 . + . ID=gene-C9E95_RS12420;Name=C9E95_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12420;old_locus_tag=C9E95_12740 NZ_PYJW01000115.1 Protein Homology CDS 76785 76994 . + 0 ID=cds-WP_001062558.1;Parent=gene-C9E95_RS12420;Dbxref=GenBank:WP_001062558.1;Name=WP_001062558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462588.1;locus_tag=C9E95_RS12420;product=hypothetical protein;protein_id=WP_001062558.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 77004 77594 . - . ID=gene-C9E95_RS12425;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=C9E95_RS12425;old_locus_tag=C9E95_12745 NZ_PYJW01000115.1 Protein Homology CDS 77004 77594 . - 0 ID=cds-WP_000193201.1;Parent=gene-C9E95_RS12425;Dbxref=GenBank:WP_000193201.1;Name=WP_000193201.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462587.1;locus_tag=C9E95_RS12425;product=mannitol operon repressor MtlR;protein_id=WP_000193201.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 77591 78739 . - . ID=gene-C9E95_RS12430;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=C9E95_RS12430;old_locus_tag=C9E95_12750 NZ_PYJW01000115.1 Protein Homology CDS 77591 78739 . - 0 ID=cds-WP_000645393.1;Parent=gene-C9E95_RS12430;Dbxref=GenBank:WP_000645393.1;Name=WP_000645393.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462586.1;locus_tag=C9E95_RS12430;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_000645393.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 78960 80876 . - . ID=gene-C9E95_RS12435;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=C9E95_RS12435;old_locus_tag=C9E95_12755 NZ_PYJW01000115.1 Protein Homology CDS 78960 80876 . - 0 ID=cds-WP_000093287.1;Parent=gene-C9E95_RS12435;Dbxref=GenBank:WP_000093287.1;Name=WP_000093287.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462585.1;locus_tag=C9E95_RS12435;product=PTS mannitol transporter subunit IICBA;protein_id=WP_000093287.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 81410 81772 . + . ID=gene-C9E95_RS12445;Name=C9E95_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12445;old_locus_tag=C9E95_12765 NZ_PYJW01000115.1 Protein Homology CDS 81410 81772 . + 0 ID=cds-WP_000479642.1;Parent=gene-C9E95_RS12445;Dbxref=GenBank:WP_000479642.1;Name=WP_000479642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418055.1;locus_tag=C9E95_RS12445;product=DUF3302 domain-containing protein;protein_id=WP_000479642.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 81775 82911 . + . ID=gene-C9E95_RS12450;Name=C9E95_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12450;old_locus_tag=C9E95_12770 NZ_PYJW01000115.1 Protein Homology CDS 81775 82911 . + 0 ID=cds-WP_000364909.1;Parent=gene-C9E95_RS12450;Dbxref=GenBank:WP_000364909.1;Name=WP_000364909.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312500.1;locus_tag=C9E95_RS12450;product=HlyD family secretion protein;protein_id=WP_000364909.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 83009 83617 . + . ID=gene-C9E95_RS12455;Name=C9E95_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12455;old_locus_tag=C9E95_12775 NZ_PYJW01000115.1 Protein Homology CDS 83009 83617 . + 0 ID=cds-WP_000766677.1;Parent=gene-C9E95_RS12455;Dbxref=GenBank:WP_000766677.1;Name=WP_000766677.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462584.1;locus_tag=C9E95_RS12455;product=glutathione S-transferase;protein_id=WP_000766677.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 83716 85107 . + . ID=gene-C9E95_RS12460;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=C9E95_RS12460;old_locus_tag=C9E95_12780 NZ_PYJW01000115.1 Protein Homology CDS 83716 85107 . + 0 ID=cds-WP_000200188.1;Parent=gene-C9E95_RS12460;Dbxref=GenBank:WP_000200188.1;Name=WP_000200188.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462583.1;locus_tag=C9E95_RS12460;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_000200188.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 85104 86954 . + . ID=gene-C9E95_RS12465;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=C9E95_RS12465;old_locus_tag=C9E95_12785 NZ_PYJW01000115.1 Protein Homology CDS 85104 86954 . + 0 ID=cds-WP_023993476.1;Parent=gene-C9E95_RS12465;Dbxref=GenBank:WP_023993476.1;Name=WP_023993476.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462582.1;locus_tag=C9E95_RS12465;product=selenocysteine-specific translation elongation factor;protein_id=WP_023993476.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 87192 88073 . - . ID=gene-C9E95_RS12470;Name=C9E95_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12470;old_locus_tag=C9E95_12790 NZ_PYJW01000115.1 Protein Homology CDS 87192 88073 . - 0 ID=cds-WP_001188273.1;Parent=gene-C9E95_RS12470;Dbxref=GenBank:WP_001188273.1;Name=WP_001188273.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954677.1;locus_tag=C9E95_RS12470;product=ROK family protein;protein_id=WP_001188273.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 88242 89780 . + . ID=gene-C9E95_RS12475;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=C9E95_RS12475;old_locus_tag=C9E95_12795 NZ_PYJW01000115.1 Protein Homology CDS 88242 89780 . + 0 ID=cds-WP_000183988.1;Parent=gene-C9E95_RS12475;Dbxref=GenBank:WP_000183988.1;Name=WP_000183988.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462580.1;locus_tag=C9E95_RS12475;product=aldehyde dehydrogenase AldB;protein_id=WP_000183988.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 89898 91853 . - . ID=gene-C9E95_RS12480;Name=C9E95_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12480;old_locus_tag=C9E95_12800 NZ_PYJW01000115.1 Protein Homology CDS 89898 91853 . - 0 ID=cds-WP_023993477.1;Parent=gene-C9E95_RS12480;Dbxref=GenBank:WP_023993477.1;Name=WP_023993477.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462579.1;locus_tag=C9E95_RS12480;product=glycoside hydrolase family 127 protein;protein_id=WP_023993477.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 92117 92932 . + . ID=gene-C9E95_RS12485;Name=C9E95_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12485;old_locus_tag=C9E95_12805 NZ_PYJW01000115.1 Protein Homology CDS 92117 92932 . + 0 ID=cds-WP_000891808.1;Parent=gene-C9E95_RS12485;Dbxref=GenBank:WP_000891808.1;Name=WP_000891808.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462578.1;locus_tag=C9E95_RS12485;product=AraC family transcriptional regulator;protein_id=WP_000891808.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 93093 93788 . - . ID=gene-C9E95_RS12490;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=C9E95_RS12490;old_locus_tag=C9E95_12810 NZ_PYJW01000115.1 Protein Homology CDS 93093 93788 . - 0 ID=cds-WP_000893174.1;Parent=gene-C9E95_RS12490;Dbxref=GenBank:WP_000893174.1;Name=WP_000893174.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462577.1;locus_tag=C9E95_RS12490;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000893174.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 93782 94642 . - . ID=gene-C9E95_RS12495;Name=C9E95_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12495;old_locus_tag=C9E95_12815 NZ_PYJW01000115.1 Protein Homology CDS 93782 94642 . - 0 ID=cds-WP_023993478.1;Parent=gene-C9E95_RS12495;Dbxref=GenBank:WP_023993478.1;Name=WP_023993478.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462576.1;locus_tag=C9E95_RS12495;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_023993478.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 94635 95297 . - . ID=gene-C9E95_RS12500;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=C9E95_RS12500;old_locus_tag=C9E95_12820 NZ_PYJW01000115.1 Protein Homology CDS 94635 95297 . - 0 ID=cds-WP_000089527.1;Parent=gene-C9E95_RS12500;Dbxref=GenBank:WP_000089527.1;Name=WP_000089527.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462575.1;locus_tag=C9E95_RS12500;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000089527.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 95294 96790 . - . ID=gene-C9E95_RS12505;Name=C9E95_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12505;old_locus_tag=C9E95_12825 NZ_PYJW01000115.1 Protein Homology CDS 95294 96790 . - 0 ID=cds-WP_061378858.1;Parent=gene-C9E95_RS12505;Dbxref=GenBank:WP_061378858.1;Name=WP_061378858.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462574.1;locus_tag=C9E95_RS12505;product=FGGY-family carbohydrate kinase;protein_id=WP_061378858.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 96794 97780 . - . ID=gene-C9E95_RS12510;Name=yiaO;gbkey=Gene;gene=yiaO;gene_biotype=protein_coding;locus_tag=C9E95_RS12510;old_locus_tag=C9E95_12830 NZ_PYJW01000115.1 Protein Homology CDS 96794 97780 . - 0 ID=cds-WP_000766337.1;Parent=gene-C9E95_RS12510;Dbxref=GenBank:WP_000766337.1;Name=WP_000766337.1;gbkey=CDS;gene=yiaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462573.1;locus_tag=C9E95_RS12510;product=2%2C3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO;protein_id=WP_000766337.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 97792 99069 . - . ID=gene-C9E95_RS12515;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=C9E95_RS12515;old_locus_tag=C9E95_12835 NZ_PYJW01000115.1 Protein Homology CDS 97792 99069 . - 0 ID=cds-WP_000301822.1;Parent=gene-C9E95_RS12515;Dbxref=GenBank:WP_000301822.1;Name=WP_000301822.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaN;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462572.1;locus_tag=C9E95_RS12515;product=2%2C3-diketo-L-gulonate TRAP transporter large permease YiaN;protein_id=WP_000301822.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 99072 99545 . - . ID=gene-C9E95_RS12520;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=C9E95_RS12520;old_locus_tag=C9E95_12840 NZ_PYJW01000115.1 Protein Homology CDS 99072 99545 . - 0 ID=cds-WP_000832316.1;Parent=gene-C9E95_RS12520;Dbxref=GenBank:WP_000832316.1;Name=WP_000832316.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaM;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462571.1;locus_tag=C9E95_RS12520;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WP_000832316.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 99684 100616 . - . ID=gene-C9E95_RS12525;Name=C9E95_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12525;old_locus_tag=C9E95_12845 NZ_PYJW01000115.1 Protein Homology CDS 99684 100616 . - 0 ID=cds-WP_000794971.1;Parent=gene-C9E95_RS12525;Dbxref=GenBank:WP_000794971.1;Name=WP_000794971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462570.1;locus_tag=C9E95_RS12525;product=DUF4862 family protein;protein_id=WP_000794971.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 100640 101104 . - . ID=gene-C9E95_RS12530;Name=C9E95_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12530;old_locus_tag=C9E95_12850 NZ_PYJW01000115.1 Protein Homology CDS 100640 101104 . - 0 ID=cds-WP_080203790.1;Parent=gene-C9E95_RS12530;Dbxref=GenBank:WP_080203790.1;Name=WP_080203790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462569.1;locus_tag=C9E95_RS12530;product=YhcH/YjgK/YiaL family protein;protein_id=WP_080203790.1;transl_table=11 NZ_PYJW01000115.1 RefSeq gene 101116 102114 . - . ID=gene-C9E95_RS12535;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=C9E95_RS12535;old_locus_tag=C9E95_12855 NZ_PYJW01000115.1 Protein Homology CDS 101116 102114 . - 0 ID=cds-WP_080203789.1;Parent=gene-C9E95_RS12535;Dbxref=GenBank:WP_080203789.1;Name=WP_080203789.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462568.1;locus_tag=C9E95_RS12535;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_080203789.1;transl_table=11 ##sequence-region NZ_PYJW01000042.1 1 28346 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000042.1 RefSeq region 1 28346 . + . ID=NZ_PYJW01000042.1:1..28346;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000042.1 RefSeq gene 271 327 . + . ID=gene-C9E95_RS23400;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=C9E95_RS23400 NZ_PYJW01000042.1 Protein Homology CDS 271 327 . + 0 ID=cds-WP_212723238.1;Parent=gene-C9E95_RS23400;Dbxref=GenBank:WP_212723238.1;Name=WP_212723238.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=C9E95_RS23400;product=YsgD/CorL family protein;protein_id=WP_212723238.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 483 1433 . + . ID=gene-C9E95_RS03000;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=C9E95_RS03000;old_locus_tag=C9E95_03055 NZ_PYJW01000042.1 Protein Homology CDS 483 1433 . + 0 ID=cds-WP_135369811.1;Parent=gene-C9E95_RS03000;Dbxref=GenBank:WP_135369811.1;Name=WP_135369811.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=C9E95_RS03000;product=magnesium/cobalt transporter CorA;protein_id=WP_135369811.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 1481 1861 . - . ID=gene-C9E95_RS03005;Name=C9E95_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03005;old_locus_tag=C9E95_03060 NZ_PYJW01000042.1 Protein Homology CDS 1481 1861 . - 0 ID=cds-WP_080204084.1;Parent=gene-C9E95_RS03005;Dbxref=GenBank:WP_080204084.1;Name=WP_080204084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727015.1;locus_tag=C9E95_RS03005;product=hypothetical protein;protein_id=WP_080204084.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 2036 2332 . + . ID=gene-C9E95_RS03010;Name=C9E95_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03010;old_locus_tag=C9E95_03065 NZ_PYJW01000042.1 Protein Homology CDS 2036 2332 . + 0 ID=cds-WP_001170054.1;Parent=gene-C9E95_RS03010;Dbxref=GenBank:WP_001170054.1;Name=WP_001170054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001170054.1;locus_tag=C9E95_RS03010;product=hypothetical protein;protein_id=WP_001170054.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 2372 3259 . - . ID=gene-C9E95_RS03015;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=C9E95_RS03015;old_locus_tag=C9E95_03070 NZ_PYJW01000042.1 Protein Homology CDS 2372 3259 . - 0 ID=cds-WP_000339081.1;Parent=gene-C9E95_RS03015;Dbxref=GenBank:WP_000339081.1;Name=WP_000339081.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000339076.1;locus_tag=C9E95_RS03015;product=EamA family transporter RarD;protein_id=WP_000339081.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 3303 3770 . - . ID=gene-C9E95_RS03020;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=C9E95_RS03020;old_locus_tag=C9E95_03075 NZ_PYJW01000042.1 Protein Homology CDS 3303 3770 . - 0 ID=cds-WP_001277136.1;Parent=gene-C9E95_RS03020;Dbxref=GenBank:WP_001277136.1;Name=WP_001277136.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=C9E95_RS03020;product=acyl-CoA thioesterase YigI;protein_id=WP_001277136.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 3935 4804 . + . ID=gene-C9E95_RS03025;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=C9E95_RS03025;old_locus_tag=C9E95_03080 NZ_PYJW01000042.1 Protein Homology CDS 3935 4804 . + 0 ID=cds-WP_001201692.1;Parent=gene-C9E95_RS03025;Dbxref=GenBank:WP_001201692.1;Name=WP_001201692.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462842.1;locus_tag=C9E95_RS03025;product=phospholipase A;protein_id=WP_001201692.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 4888 6717 . + . ID=gene-C9E95_RS03030;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=C9E95_RS03030;old_locus_tag=C9E95_03085 NZ_PYJW01000042.1 Protein Homology CDS 4888 6717 . + 0 ID=cds-WP_001533487.1;Parent=gene-C9E95_RS03030;Dbxref=GenBank:WP_001533487.1;Name=WP_001533487.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=C9E95_RS03030;product=ATP-dependent DNA helicase RecQ;protein_id=WP_001533487.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 6781 7401 . + . ID=gene-C9E95_RS03035;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=C9E95_RS03035;old_locus_tag=C9E95_03090 NZ_PYJW01000042.1 Protein Homology CDS 6781 7401 . + 0 ID=cds-WP_000928814.1;Parent=gene-C9E95_RS03035;Dbxref=GenBank:WP_000928814.1;Name=WP_000928814.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462844.1;locus_tag=C9E95_RS03035;product=threonine export protein RhtC;protein_id=WP_000928814.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 7441 8061 . - . ID=gene-C9E95_RS03040;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=C9E95_RS03040;old_locus_tag=C9E95_03095 NZ_PYJW01000042.1 Protein Homology CDS 7441 8061 . - 0 ID=cds-WP_000142524.1;Parent=gene-C9E95_RS03040;Dbxref=GenBank:WP_000142524.1;Name=WP_000142524.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462845.1;locus_tag=C9E95_RS03040;product=homoserine/homoserine lactone efflux protein;protein_id=WP_000142524.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 8172 9188 . + . ID=gene-C9E95_RS03045;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=C9E95_RS03045;old_locus_tag=C9E95_03100 NZ_PYJW01000042.1 Protein Homology CDS 8172 9188 . + 0 ID=cds-WP_000487685.1;Parent=gene-C9E95_RS03045;Dbxref=GenBank:WP_000487685.1;Name=WP_000487685.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462846.1;locus_tag=C9E95_RS03045;product=lysophospholipase L2;protein_id=WP_000487685.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 9204 10004 . + . ID=gene-C9E95_RS03050;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=C9E95_RS03050;old_locus_tag=C9E95_03105 NZ_PYJW01000042.1 Protein Homology CDS 9204 10004 . + 0 ID=cds-WP_000285338.1;Parent=gene-C9E95_RS03050;Dbxref=GenBank:WP_000285338.1;Name=WP_000285338.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462847.1;locus_tag=C9E95_RS03050;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_000285338.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 10085 10984 . + . ID=gene-C9E95_RS03055;Name=C9E95_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03055;old_locus_tag=C9E95_03110 NZ_PYJW01000042.1 Protein Homology CDS 10085 10984 . + 0 ID=cds-WP_001196254.1;Parent=gene-C9E95_RS03055;Dbxref=GenBank:WP_001196254.1;Name=WP_001196254.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462848.1;locus_tag=C9E95_RS03055;product=carboxylate/amino acid/amine transporter;protein_id=WP_001196254.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 10872 11825 . - . ID=gene-C9E95_RS03060;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=C9E95_RS03060;old_locus_tag=C9E95_03115 NZ_PYJW01000042.1 Protein Homology CDS 10872 11825 . - 0 ID=cds-WP_000569786.1;Parent=gene-C9E95_RS03060;Dbxref=GenBank:WP_000569786.1;Name=WP_000569786.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462849.1;locus_tag=C9E95_RS03060;product=HTH-type transcriptional regulator MetR;protein_id=WP_000569786.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 12061 14325 . + . ID=gene-C9E95_RS03065;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=C9E95_RS03065;old_locus_tag=C9E95_03120 NZ_PYJW01000042.1 Protein Homology CDS 12061 14325 . + 0 ID=cds-WP_000154179.1;Parent=gene-C9E95_RS03065;Dbxref=GenBank:WP_000154179.1;Name=WP_000154179.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462850.1;locus_tag=C9E95_RS03065;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_000154179.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 14669 16012 . + . ID=gene-C9E95_RS03075;Name=C9E95_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03075;old_locus_tag=C9E95_03125 NZ_PYJW01000042.1 Protein Homology CDS 14669 16012 . + 0 ID=cds-WP_000017949.1;Parent=gene-C9E95_RS03075;Dbxref=GenBank:WP_000017949.1;Name=WP_000017949.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462851.1;locus_tag=C9E95_RS03075;product=anaerobic sulfatase maturase;protein_id=WP_000017949.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 16092 16904 . - . ID=gene-C9E95_RS03080;Name=C9E95_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03080;old_locus_tag=C9E95_03130 NZ_PYJW01000042.1 Protein Homology CDS 16092 16904 . - 0 ID=cds-WP_000213959.1;Parent=gene-C9E95_RS03080;Dbxref=GenBank:WP_000213959.1;Name=WP_000213959.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462852.1;locus_tag=C9E95_RS03080;product=dienelactone hydrolase family protein;protein_id=WP_000213959.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 17163 17924 . + . ID=gene-C9E95_RS03085;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=C9E95_RS03085;old_locus_tag=C9E95_03135 NZ_PYJW01000042.1 Protein Homology CDS 17163 17924 . + 0 ID=cds-WP_000045169.1;Parent=gene-C9E95_RS03085;Dbxref=GenBank:WP_000045169.1;Name=WP_000045169.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462853.1;locus_tag=C9E95_RS03085;product=uridine phosphorylase;protein_id=WP_000045169.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 18064 19494 . + . ID=gene-C9E95_RS03090;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=C9E95_RS03090;old_locus_tag=C9E95_03140 NZ_PYJW01000042.1 Protein Homology CDS 18064 19494 . + 0 ID=cds-WP_000355562.1;Parent=gene-C9E95_RS03090;Dbxref=GenBank:WP_000355562.1;Name=WP_000355562.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462854.1;locus_tag=C9E95_RS03090;product=DNA recombination protein RmuC;protein_id=WP_000355562.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 19590 20345 . + . ID=gene-C9E95_RS03095;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=C9E95_RS03095;old_locus_tag=C9E95_03145 NZ_PYJW01000042.1 Protein Homology CDS 19590 20345 . + 0 ID=cds-WP_000229009.1;Parent=gene-C9E95_RS03095;Dbxref=GenBank:WP_000229009.1;Name=WP_000229009.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462855.1;locus_tag=C9E95_RS03095;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_000229009.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 20355 20960 . + . ID=gene-C9E95_RS03100;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=C9E95_RS03100;old_locus_tag=C9E95_03150 NZ_PYJW01000042.1 Protein Homology CDS 20355 20960 . + 0 ID=cds-WP_023993648.1;Parent=gene-C9E95_RS03100;Dbxref=GenBank:WP_023993648.1;Name=WP_023993648.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462856.1;locus_tag=C9E95_RS03100;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_023993648.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 20957 22597 . + . ID=gene-C9E95_RS03105;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=C9E95_RS03105;old_locus_tag=C9E95_03155 NZ_PYJW01000042.1 Protein Homology CDS 20957 22597 . + 0 ID=cds-WP_080204085.1;Parent=gene-C9E95_RS03105;Dbxref=GenBank:WP_080204085.1;Name=WP_080204085.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462857.1;locus_tag=C9E95_RS03105;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_080204085.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 22803 23057 . + . ID=gene-C9E95_RS03110;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=C9E95_RS03110;old_locus_tag=C9E95_03160 NZ_PYJW01000042.1 Protein Homology CDS 22803 23057 . + 0 ID=cds-WP_000508972.1;Parent=gene-C9E95_RS03110;Dbxref=GenBank:WP_000508972.1;Name=WP_000508972.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462858.1;locus_tag=C9E95_RS03110;product=Sec-independent protein translocase subunit TatA;protein_id=WP_000508972.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 23061 23609 . + . ID=gene-C9E95_RS03115;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=C9E95_RS03115;old_locus_tag=C9E95_03165 NZ_PYJW01000042.1 Protein Homology CDS 23061 23609 . + 0 ID=cds-WP_000459612.1;Parent=gene-C9E95_RS03115;Dbxref=GenBank:WP_000459612.1;Name=WP_000459612.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462859.1;locus_tag=C9E95_RS03115;product=Sec-independent protein translocase protein TatB;protein_id=WP_000459612.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 23612 24391 . + . ID=gene-C9E95_RS03120;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=C9E95_RS03120;old_locus_tag=C9E95_03170 NZ_PYJW01000042.1 Protein Homology CDS 23612 24391 . + 0 ID=cds-WP_000257554.1;Parent=gene-C9E95_RS03120;Dbxref=GenBank:WP_000257554.1;Name=WP_000257554.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462860.1;locus_tag=C9E95_RS03120;product=Sec-independent protein translocase subunit TatC;protein_id=WP_000257554.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 24433 25215 . + . ID=gene-C9E95_RS03125;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=C9E95_RS03125;old_locus_tag=C9E95_03175 NZ_PYJW01000042.1 Protein Homology CDS 24433 25215 . + 0 ID=cds-WP_000459643.1;Parent=gene-C9E95_RS03125;Dbxref=GenBank:WP_000459643.1;Name=WP_000459643.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462861.3;locus_tag=C9E95_RS03125;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_000459643.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 25223 25711 . - . ID=gene-C9E95_RS03130;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=C9E95_RS03130;old_locus_tag=C9E95_03180 NZ_PYJW01000042.1 Protein Homology CDS 25223 25711 . - 0 ID=cds-WP_001192410.1;Parent=gene-C9E95_RS03130;Dbxref=GenBank:WP_001192410.1;Name=WP_001192410.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462862.1;locus_tag=C9E95_RS03130;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_001192410.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 25897 27375 . + . ID=gene-C9E95_RS03135;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=C9E95_RS03135;old_locus_tag=C9E95_03185 NZ_PYJW01000042.1 Protein Homology CDS 25897 27375 . + 0 ID=cds-WP_000339760.1;Parent=gene-C9E95_RS03135;Dbxref=GenBank:WP_000339760.1;Name=WP_000339760.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462863.1;locus_tag=C9E95_RS03135;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_000339760.1;transl_table=11 NZ_PYJW01000042.1 RefSeq gene 27461 28162 . + . ID=gene-C9E95_RS03140;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=C9E95_RS03140;old_locus_tag=C9E95_03190 NZ_PYJW01000042.1 Protein Homology CDS 27461 28162 . + 0 ID=cds-WP_000209831.1;Parent=gene-C9E95_RS03140;Dbxref=GenBank:WP_000209831.1;Name=WP_000209831.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462864.1;locus_tag=C9E95_RS03140;product=NAD(P)H-flavin reductase;protein_id=WP_000209831.1;transl_table=11 ##sequence-region NZ_PYJW01000086.1 1 27944 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000086.1 RefSeq region 1 27944 . + . ID=NZ_PYJW01000086.1:1..27944;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000086.1 RefSeq gene 87 938 . - . ID=gene-C9E95_RS08810;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=C9E95_RS08810;old_locus_tag=C9E95_09030 NZ_PYJW01000086.1 Protein Homology CDS 87 938 . - 0 ID=cds-WP_000201805.1;Parent=gene-C9E95_RS08810;Dbxref=GenBank:WP_000201805.1;Name=WP_000201805.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463010.1;locus_tag=C9E95_RS08810;product=glutamate racemase;protein_id=WP_000201805.1;transl_table=11 NZ_PYJW01000086.1 RefSeq gene 883 2727 . - . ID=gene-C9E95_RS08815;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=C9E95_RS08815;old_locus_tag=C9E95_09035 NZ_PYJW01000086.1 Protein Homology CDS 883 2727 . - 0 ID=cds-WP_000591411.1;Parent=gene-C9E95_RS08815;Dbxref=GenBank:WP_000591411.1;Name=WP_000591411.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463009.1;locus_tag=C9E95_RS08815;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_000591411.1;transl_table=11 NZ_PYJW01000086.1 cmsearch riboswitch 2794 2986 . - . ID=id-NZ_PYJW01000086.1:2794..2986;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PYJW01000086.1 RefSeq gene 3101 4201 . + . ID=gene-C9E95_RS08820;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=C9E95_RS08820;old_locus_tag=C9E95_09040 NZ_PYJW01000086.1 Protein Homology CDS 3101 4201 . + 0 ID=cds-WP_000186980.1;Parent=gene-C9E95_RS08820;Dbxref=GenBank:WP_000186980.1;Name=WP_000186980.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463008.1;locus_tag=C9E95_RS08820;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_000186980.1;transl_table=11 NZ_PYJW01000086.1 RefSeq gene 4248 4607 . - . ID=gene-C9E95_RS08825;Name=C9E95_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08825;old_locus_tag=C9E95_09045 NZ_PYJW01000086.1 Protein Homology CDS 4248 4607 . - 0 ID=cds-WP_000813838.1;Parent=gene-C9E95_RS08825;Dbxref=GenBank:WP_000813838.1;Name=WP_000813838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463007.1;locus_tag=C9E95_RS08825;product=YijD family membrane protein;protein_id=WP_000813838.1;transl_table=11 NZ_PYJW01000086.1 RefSeq gene 4623 5258 . - . ID=gene-C9E95_RS08830;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=C9E95_RS08830;old_locus_tag=C9E95_09050 NZ_PYJW01000086.1 Protein Homology CDS 4623 5258 . - 0 ID=cds-WP_000971958.1;Parent=gene-C9E95_RS08830;Dbxref=GenBank:WP_000971958.1;Name=WP_000971958.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463006.3;locus_tag=C9E95_RS08830;product=HTH-type transcriptional repressor FabR;protein_id=WP_000971958.1;transl_table=11 NZ_PYJW01000086.1 RefSeq gene 5457 6857 . + . ID=gene-C9E95_RS08835;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=C9E95_RS08835;old_locus_tag=C9E95_09060 NZ_PYJW01000086.1 Protein Homology CDS 5457 6857 . + 0 ID=cds-WP_001120791.1;Parent=gene-C9E95_RS08835;Dbxref=GenBank:WP_001120791.1;Name=WP_001120791.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=C9E95_RS08835;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_001120791.1;transl_table=11 NZ_PYJW01000086.1 RefSeq gene 6840 7757 . - . ID=gene-C9E95_RS08840;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=C9E95_RS08840;old_locus_tag=C9E95_09065 NZ_PYJW01000086.1 Protein Homology CDS 6840 7757 . - 0 ID=cds-WP_001025919.1;Parent=gene-C9E95_RS08840;Dbxref=GenBank:WP_001025919.1;Name=WP_001025919.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=C9E95_RS08840;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_001025919.1;transl_table=11 NZ_PYJW01000086.1 RefSeq gene 8042 9418 . - . ID=gene-C9E95_RS08850;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=C9E95_RS08850;old_locus_tag=C9E95_09075 NZ_PYJW01000086.1 Protein Homology CDS 8042 9418 . - 0 ID=cds-WP_020437553.1;Parent=gene-C9E95_RS08850;Dbxref=GenBank:WP_020437553.1;Name=WP_020437553.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463003.1;locus_tag=C9E95_RS08850;product=argininosuccinate lyase;protein_id=WP_020437553.1;transl_table=11 NZ_PYJW01000086.1 RefSeq gene 9536 10312 . - . ID=gene-C9E95_RS08855;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=C9E95_RS08855;old_locus_tag=C9E95_09080 NZ_PYJW01000086.1 Protein Homology CDS 9536 10312 . - 0 ID=cds-WP_001575262.1;Parent=gene-C9E95_RS08855;Dbxref=GenBank:WP_001575262.1;Name=WP_001575262.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=C9E95_RS08855;product=acetylglutamate kinase;protein_id=WP_001575262.1;transl_table=11 NZ_PYJW01000086.1 RefSeq gene 10320 11324 . - . ID=gene-C9E95_RS08860;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=C9E95_RS08860;old_locus_tag=C9E95_09085 NZ_PYJW01000086.1 Protein Homology CDS 10320 11324 . - 0 ID=cds-WP_000935332.1;Parent=gene-C9E95_RS08860;Dbxref=GenBank:WP_000935332.1;Name=WP_000935332.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=C9E95_RS08860;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_000935332.1;transl_table=11 NZ_PYJW01000086.1 RefSeq gene 11413 12564 . + . ID=gene-C9E95_RS08865;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=C9E95_RS08865;old_locus_tag=C9E95_09090 NZ_PYJW01000086.1 Protein Homology CDS 11413 12564 . + 0 ID=cds-WP_000800208.1;Parent=gene-C9E95_RS08865;Dbxref=GenBank:WP_000800208.1;Name=WP_000800208.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463000.1;locus_tag=C9E95_RS08865;product=acetylornithine deacetylase;protein_id=WP_000800208.1;transl_table=11 NZ_PYJW01000086.1 RefSeq gene 12933 15584 . + . ID=gene-C9E95_RS08870;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=C9E95_RS08870;old_locus_tag=C9E95_09100 NZ_PYJW01000086.1 Protein Homology CDS 12933 15584 . + 0 ID=cds-WP_001005548.1;Parent=gene-C9E95_RS08870;Dbxref=GenBank:WP_001005548.1;Name=WP_001005548.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=C9E95_RS08870;product=phosphoenolpyruvate carboxylase;protein_id=WP_001005548.1;transl_table=11 NZ_PYJW01000086.1 RefSeq gene 15795 17528 . + . ID=gene-C9E95_RS08875;Name=C9E95_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08875;old_locus_tag=C9E95_09105 NZ_PYJW01000086.1 Protein Homology CDS 15795 17528 . + 0 ID=cds-WP_001528929.1;Parent=gene-C9E95_RS08875;Dbxref=GenBank:WP_001528929.1;Name=WP_001528929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462998.1;locus_tag=C9E95_RS08875;product=phosphoethanolamine transferase CptA;protein_id=WP_001528929.1;transl_table=11 NZ_PYJW01000086.1 RefSeq gene 17689 18525 . + . ID=gene-C9E95_RS08880;Name=C9E95_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08880;old_locus_tag=C9E95_09110 NZ_PYJW01000086.1 Protein Homology CDS 17689 18525 . + 0 ID=cds-WP_000274595.1;Parent=gene-C9E95_RS08880;Dbxref=GenBank:WP_000274595.1;Name=WP_000274595.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506508.1;locus_tag=C9E95_RS08880;product=helix-turn-helix transcriptional regulator;protein_id=WP_000274595.1;transl_table=11 NZ_PYJW01000086.1 RefSeq gene 18780 19442 . + . ID=gene-C9E95_RS08885;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=C9E95_RS08885;old_locus_tag=C9E95_09115 NZ_PYJW01000086.1 Protein Homology CDS 18780 19442 . + 0 ID=cds-WP_000424866.1;Parent=gene-C9E95_RS08885;Dbxref=GenBank:WP_000424866.1;Name=WP_000424866.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462990.1;locus_tag=C9E95_RS08885;product=fructose-6-phosphate aldolase;protein_id=WP_000424866.1;transl_table=11 NZ_PYJW01000086.1 RefSeq gene 19454 20557 . + . ID=gene-C9E95_RS08890;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=C9E95_RS08890;old_locus_tag=C9E95_09120 NZ_PYJW01000086.1 Protein Homology CDS 19454 20557 . + 0 ID=cds-WP_000374031.1;Parent=gene-C9E95_RS08890;Dbxref=GenBank:WP_000374031.1;Name=WP_000374031.1;Ontology_term=GO:0019588,GO:0051596,GO:0008888,GO:0019147;gbkey=CDS;gene=gldA;go_function=glycerol dehydrogenase (NAD+) activity|0008888||IEA,(R)-aminopropanol dehydrogenase activity|0019147||IEA;go_process=anaerobic glycerol catabolic process|0019588||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462989.1;locus_tag=C9E95_RS08890;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=WP_000374031.1;transl_table=11 NZ_PYJW01000086.1 RefSeq gene 20816 21439 . + . ID=gene-C9E95_RS08895;Name=C9E95_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08895;old_locus_tag=C9E95_09125 NZ_PYJW01000086.1 Protein Homology CDS 20816 21439 . + 0 ID=cds-WP_080203838.1;Parent=gene-C9E95_RS08895;Dbxref=GenBank:WP_080203838.1;Name=WP_080203838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462988.1;locus_tag=C9E95_RS08895;product=DUF1287 domain-containing protein;protein_id=WP_080203838.1;transl_table=11 NZ_PYJW01000086.1 RefSeq gene 21497 23677 . - . ID=gene-C9E95_RS08900;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=C9E95_RS08900;old_locus_tag=C9E95_09130 NZ_PYJW01000086.1 Protein Homology CDS 21497 23677 . - 0 ID=cds-WP_000108105.1;Parent=gene-C9E95_RS08900;Dbxref=GenBank:WP_000108105.1;Name=WP_000108105.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462987.1;locus_tag=C9E95_RS08900;product=catalase/peroxidase HPI;protein_id=WP_000108105.1;transl_table=11 NZ_PYJW01000086.1 RefSeq gene 23842 24732 . - . ID=gene-C9E95_RS08905;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=C9E95_RS08905;old_locus_tag=C9E95_09135 NZ_PYJW01000086.1 Protein Homology CDS 23842 24732 . - 0 ID=cds-WP_000007507.1;Parent=gene-C9E95_RS08905;Dbxref=GenBank:WP_000007507.1;Name=WP_000007507.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462986.1;locus_tag=C9E95_RS08905;product=methylenetetrahydrofolate reductase;protein_id=WP_000007507.1;transl_table=11 NZ_PYJW01000086.1 RefSeq gene 24927 26483 . - . ID=gene-C9E95_RS08910;Name=C9E95_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08910;old_locus_tag=C9E95_09140 NZ_PYJW01000086.1 Protein Homology CDS 24927 26483 . - 0 ID=cds-WP_000865257.1;Parent=gene-C9E95_RS08910;Dbxref=GenBank:WP_000865257.1;Name=WP_000865257.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462985.1;locus_tag=C9E95_RS08910;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_000865257.1;transl_table=11 NZ_PYJW01000086.1 RefSeq gene 26619 27743 . + . ID=gene-C9E95_RS08915;Name=C9E95_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08915;old_locus_tag=C9E95_09145 NZ_PYJW01000086.1 Protein Homology CDS 26619 27743 . + 0 ID=cds-WP_001134803.1;Parent=gene-C9E95_RS08915;Dbxref=GenBank:WP_001134803.1;Name=WP_001134803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462984.1;locus_tag=C9E95_RS08915;product=hypothetical protein;protein_id=WP_001134803.1;transl_table=11 ##sequence-region NZ_PYJW01000003.1 1 27896 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000003.1 RefSeq region 1 27896 . + . ID=NZ_PYJW01000003.1:1..27896;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000003.1 RefSeq gene 162 344 . + . ID=gene-C9E95_RS00015;Name=C9E95_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00015;old_locus_tag=C9E95_00015 NZ_PYJW01000003.1 Protein Homology CDS 162 344 . + 0 ID=cds-WP_000807657.1;Parent=gene-C9E95_RS00015;Dbxref=GenBank:WP_000807657.1;Name=WP_000807657.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460687.1;locus_tag=C9E95_RS00015;product=general stress protein;protein_id=WP_000807657.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 434 937 . + . ID=gene-C9E95_RS00020;Name=C9E95_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00020;old_locus_tag=C9E95_00020 NZ_PYJW01000003.1 Protein Homology CDS 434 937 . + 0 ID=cds-WP_001022822.1;Parent=gene-C9E95_RS00020;Dbxref=GenBank:WP_001022822.1;Name=WP_001022822.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460688.1;locus_tag=C9E95_RS00020;product=ferritin-like domain-containing protein;protein_id=WP_001022822.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 1011 1517 . + . ID=gene-C9E95_RS00025;Name=C9E95_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00025;old_locus_tag=C9E95_00025 NZ_PYJW01000003.1 Protein Homology CDS 1011 1517 . + 0 ID=cds-WP_001109977.1;Parent=gene-C9E95_RS00025;Dbxref=GenBank:WP_001109977.1;Name=WP_001109977.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460689.1;locus_tag=C9E95_RS00025;product=ferritin-like domain-containing protein;protein_id=WP_001109977.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 1537 2415 . + . ID=gene-C9E95_RS00030;Name=C9E95_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00030;old_locus_tag=C9E95_00030 NZ_PYJW01000003.1 Protein Homology CDS 1537 2415 . + 0 ID=cds-WP_000488354.1;Parent=gene-C9E95_RS00030;Dbxref=GenBank:WP_000488354.1;Name=WP_000488354.1;Ontology_term=GO:0004096,GO:0046872;gbkey=CDS;go_function=catalase activity|0004096||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460690.1;locus_tag=C9E95_RS00030;product=manganese catalase family protein;protein_id=WP_000488354.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 2497 3135 . - . ID=gene-C9E95_RS00035;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=C9E95_RS00035;old_locus_tag=C9E95_00035 NZ_PYJW01000003.1 Protein Homology CDS 2497 3135 . - 0 ID=cds-WP_058331447.1;Parent=gene-C9E95_RS00035;Dbxref=GenBank:WP_058331447.1;Name=WP_058331447.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460691.1;locus_tag=C9E95_RS00035;product=outer membrane protein OmpW;protein_id=WP_058331447.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 3472 3876 . + . ID=gene-C9E95_RS00040;Name=C9E95_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00040;old_locus_tag=C9E95_00040 NZ_PYJW01000003.1 Protein Homology CDS 3472 3876 . + 0 ID=cds-WP_000114955.1;Parent=gene-C9E95_RS00040;Dbxref=GenBank:WP_000114955.1;Name=WP_000114955.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=C9E95_RS00040;product=YkgJ family cysteine cluster protein;protein_id=WP_000114955.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 3902 4645 . + . ID=gene-C9E95_RS00045;Name=C9E95_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00045;old_locus_tag=C9E95_00045 NZ_PYJW01000003.1 Protein Homology CDS 3902 4645 . + 0 ID=cds-WP_000028507.1;Parent=gene-C9E95_RS00045;Dbxref=GenBank:WP_000028507.1;Name=WP_000028507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460693.1;locus_tag=C9E95_RS00045;product=YciC family protein;protein_id=WP_000028507.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 4702 5241 . + . ID=gene-C9E95_RS00050;Name=C9E95_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00050;old_locus_tag=C9E95_00050 NZ_PYJW01000003.1 Protein Homology CDS 4702 5241 . + 0 ID=cds-WP_000808682.1;Parent=gene-C9E95_RS00050;Dbxref=GenBank:WP_000808682.1;Name=WP_000808682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460694.1;locus_tag=C9E95_RS00050;product=septation protein A;protein_id=WP_000808682.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 5402 5803 . + . ID=gene-C9E95_RS00055;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=C9E95_RS00055;old_locus_tag=C9E95_00055 NZ_PYJW01000003.1 Protein Homology CDS 5402 5803 . + 0 ID=cds-WP_000210317.1;Parent=gene-C9E95_RS00055;Dbxref=GenBank:WP_000210317.1;Name=WP_000210317.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460695.1;locus_tag=C9E95_RS00055;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000210317.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 5863 6585 . - . ID=gene-C9E95_RS00060;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=C9E95_RS00060;old_locus_tag=C9E95_00060 NZ_PYJW01000003.1 Protein Homology CDS 5863 6585 . - 0 ID=cds-WP_080203685.1;Parent=gene-C9E95_RS00060;Dbxref=GenBank:WP_080203685.1;Name=WP_080203685.1;Ontology_term=GO:0015891,GO:0055085,GO:0015343,GO:0030288;gbkey=CDS;gene=tonB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460696.1;locus_tag=C9E95_RS00060;product=TonB system transport protein TonB;protein_id=WP_080203685.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 6809 7105 . + . ID=gene-C9E95_RS00065;Name=C9E95_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00065;old_locus_tag=C9E95_00065 NZ_PYJW01000003.1 Protein Homology CDS 6809 7105 . + 0 ID=cds-WP_000967605.1;Parent=gene-C9E95_RS00065;Dbxref=GenBank:WP_000967605.1;Name=WP_000967605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460697.1;locus_tag=C9E95_RS00065;product=YciI family protein;protein_id=WP_000967605.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 7149 7322 . - . ID=gene-C9E95_RS00070;Name=C9E95_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00070 NZ_PYJW01000003.1 Protein Homology CDS 7149 7322 . - 0 ID=cds-WP_001531561.1;Parent=gene-C9E95_RS00070;Dbxref=GenBank:WP_001531561.1;Name=WP_001531561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=C9E95_RS00070;product=YciY family protein;protein_id=WP_001531561.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 7465 8925 . + . ID=gene-C9E95_RS00075;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=C9E95_RS00075;old_locus_tag=C9E95_00070 NZ_PYJW01000003.1 Protein Homology CDS 7465 8925 . + 0 ID=cds-WP_000206886.1;Parent=gene-C9E95_RS00075;Dbxref=GenBank:WP_000206886.1;Name=WP_000206886.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=C9E95_RS00075;product=cardiolipin synthase;protein_id=WP_000206886.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 8959 9288 . + . ID=gene-C9E95_RS00080;Name=C9E95_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00080;old_locus_tag=C9E95_00075 NZ_PYJW01000003.1 Protein Homology CDS 8959 9288 . + 0 ID=cds-WP_000425070.1;Parent=gene-C9E95_RS00080;Dbxref=GenBank:WP_000425070.1;Name=WP_000425070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448158.1;locus_tag=C9E95_RS00080;product=HI1450 family dsDNA-mimic protein;protein_id=WP_000425070.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 9336 10172 . - . ID=gene-C9E95_RS00085;Name=C9E95_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00085;old_locus_tag=C9E95_00080 NZ_PYJW01000003.1 Protein Homology CDS 9336 10172 . - 0 ID=cds-WP_000059074.1;Parent=gene-C9E95_RS00085;Dbxref=GenBank:WP_000059074.1;Name=WP_000059074.1;Ontology_term=GO:0006811,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460700.1;locus_tag=C9E95_RS00085;product=ion transporter;protein_id=WP_000059074.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 10220 11224 . - . ID=gene-C9E95_RS00090;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=C9E95_RS00090;old_locus_tag=C9E95_00085 NZ_PYJW01000003.1 Protein Homology CDS 10220 11224 . - 0 ID=cds-WP_000994698.1;Parent=gene-C9E95_RS00090;Dbxref=GenBank:WP_000994698.1;Name=WP_000994698.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=C9E95_RS00090;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_000994698.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 11221 12228 . - . ID=gene-C9E95_RS00095;Name=C9E95_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00095;old_locus_tag=C9E95_00090 NZ_PYJW01000003.1 Protein Homology CDS 11221 12228 . - 0 ID=cds-WP_000058857.1;Parent=gene-C9E95_RS00095;Dbxref=GenBank:WP_000058857.1;Name=WP_000058857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460702.1;locus_tag=C9E95_RS00095;product=ABC transporter ATP-binding protein;protein_id=WP_000058857.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 12240 13148 . - . ID=gene-C9E95_RS00100;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=C9E95_RS00100;old_locus_tag=C9E95_00095 NZ_PYJW01000003.1 Protein Homology CDS 12240 13148 . - 0 ID=cds-WP_000979653.1;Parent=gene-C9E95_RS00100;Dbxref=GenBank:WP_000979653.1;Name=WP_000979653.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=C9E95_RS00100;product=oligopeptide ABC transporter permease OppC;protein_id=WP_000979653.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 13163 14083 . - . ID=gene-C9E95_RS00105;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=C9E95_RS00105;old_locus_tag=C9E95_00100 NZ_PYJW01000003.1 Protein Homology CDS 13163 14083 . - 0 ID=cds-WP_000911097.1;Parent=gene-C9E95_RS00105;Dbxref=GenBank:WP_000911097.1;Name=WP_000911097.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=C9E95_RS00105;product=oligopeptide ABC transporter permease OppB;protein_id=WP_000911097.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 14205 15836 . - . ID=gene-C9E95_RS00110;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=C9E95_RS00110;old_locus_tag=C9E95_00105 NZ_PYJW01000003.1 Protein Homology CDS 14205 15836 . - 0 ID=cds-WP_001527794.1;Parent=gene-C9E95_RS00110;Dbxref=GenBank:WP_001527794.1;Name=WP_001527794.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675662.1;locus_tag=C9E95_RS00110;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_001527794.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 16613 17260 . - . ID=gene-C9E95_RS00120;Name=C9E95_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00120;old_locus_tag=C9E95_00115 NZ_PYJW01000003.1 Protein Homology CDS 16613 17260 . - 0 ID=cds-WP_000615840.1;Parent=gene-C9E95_RS00120;Dbxref=GenBank:WP_000615840.1;Name=WP_000615840.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460707.1;locus_tag=C9E95_RS00120;product=YchE family NAAT transporter;protein_id=WP_000615840.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 17737 20415 . + . ID=gene-C9E95_RS00125;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=C9E95_RS00125;old_locus_tag=C9E95_00120 NZ_PYJW01000003.1 Protein Homology CDS 17737 20415 . + 0 ID=cds-WP_000301678.1;Parent=gene-C9E95_RS00125;Dbxref=GenBank:WP_000301678.1;Name=WP_000301678.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=C9E95_RS00125;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_000301678.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 20612 21229 . - . ID=gene-C9E95_RS00130;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=C9E95_RS00130;old_locus_tag=C9E95_00125 NZ_PYJW01000003.1 Protein Homology CDS 20612 21229 . - 0 ID=cds-WP_000068097.1;Parent=gene-C9E95_RS00130;Dbxref=GenBank:WP_000068097.1;Name=WP_000068097.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460709.1;locus_tag=C9E95_RS00130;product=thymidine kinase;protein_id=WP_000068097.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 21892 22305 . + . ID=gene-C9E95_RS00135;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=C9E95_RS00135;old_locus_tag=C9E95_00130 NZ_PYJW01000003.1 Protein Homology CDS 21892 22305 . + 0 ID=cds-WP_001287383.1;Parent=gene-C9E95_RS00135;Dbxref=GenBank:WP_001287383.1;Name=WP_001287383.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460710.1;locus_tag=C9E95_RS00135;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_001287383.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 22439 23347 . - . ID=gene-C9E95_RS00140;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=C9E95_RS00140;old_locus_tag=C9E95_00135 NZ_PYJW01000003.1 Protein Homology CDS 22439 23347 . - 0 ID=cds-WP_000729450.1;Parent=gene-C9E95_RS00140;Dbxref=GenBank:WP_000729450.1;Name=WP_000729450.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460711.1;locus_tag=C9E95_RS00140;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_000729450.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 23550 24563 . - . ID=gene-C9E95_RS00145;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=C9E95_RS00145;old_locus_tag=C9E95_00140 NZ_PYJW01000003.1 Protein Homology CDS 23550 24563 . - 0 ID=cds-WP_000193432.1;Parent=gene-C9E95_RS00145;Dbxref=GenBank:WP_000193432.1;Name=WP_000193432.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460712.1;locus_tag=C9E95_RS00145;product=two-component system response regulator RssB;protein_id=WP_000193432.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 24654 25559 . - . ID=gene-C9E95_RS00150;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=C9E95_RS00150;old_locus_tag=C9E95_00145 NZ_PYJW01000003.1 Protein Homology CDS 24654 25559 . - 0 ID=cds-WP_001230575.1;Parent=gene-C9E95_RS00150;Dbxref=GenBank:WP_001230575.1;Name=WP_001230575.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460713.1;locus_tag=C9E95_RS00150;product=patatin-like phospholipase RssA;protein_id=WP_001230575.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 25670 26128 . + . ID=gene-C9E95_RS00155;Name=C9E95_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00155;old_locus_tag=C9E95_00150 NZ_PYJW01000003.1 Protein Homology CDS 25670 26128 . + 0 ID=cds-WP_001540172.1;Parent=gene-C9E95_RS00155;Dbxref=GenBank:WP_001540172.1;Name=WP_001540172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460714.1;locus_tag=C9E95_RS00155;product=YchJ family protein;protein_id=WP_001540172.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 26179 27021 . + . ID=gene-C9E95_RS00160;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=C9E95_RS00160;old_locus_tag=C9E95_00155 NZ_PYJW01000003.1 Protein Homology CDS 26179 27021 . + 0 ID=cds-WP_001191156.1;Parent=gene-C9E95_RS00160;Dbxref=GenBank:WP_001191156.1;Name=WP_001191156.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460715.1;locus_tag=C9E95_RS00160;product=formyltetrahydrofolate deformylase;protein_id=WP_001191156.1;transl_table=11 NZ_PYJW01000003.1 RefSeq gene 27192 27333 . + . ID=gene-C9E95_RS00165;Name=C9E95_RS00165;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E95_RS00165;old_locus_tag=C9E95_00160 NZ_PYJW01000003.1 cmsearch ncRNA 27192 27333 . + . ID=rna-C9E95_RS00165;Parent=gene-C9E95_RS00165;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS00165;product=RtT sRNA NZ_PYJW01000003.1 cmsearch exon 27192 27333 . + . ID=exon-C9E95_RS00165-1;Parent=rna-C9E95_RS00165;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS00165;product=RtT sRNA NZ_PYJW01000003.1 RefSeq gene 27362 27446 . + . ID=gene-C9E95_RS00170;Name=C9E95_RS00170;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS00170;old_locus_tag=C9E95_00165 NZ_PYJW01000003.1 tRNAscan-SE tRNA 27362 27446 . + . ID=rna-C9E95_RS00170;Parent=gene-C9E95_RS00170;anticodon=(pos:27396..27398);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS00170;product=tRNA-Tyr NZ_PYJW01000003.1 tRNAscan-SE exon 27362 27446 . + . ID=exon-C9E95_RS00170-1;Parent=rna-C9E95_RS00170;anticodon=(pos:27396..27398);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS00170;product=tRNA-Tyr NZ_PYJW01000003.1 RefSeq gene 27491 27622 . + . ID=gene-C9E95_RS00175;Name=C9E95_RS00175;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E95_RS00175;old_locus_tag=C9E95_00170 NZ_PYJW01000003.1 cmsearch ncRNA 27491 27622 . + . ID=rna-C9E95_RS00175;Parent=gene-C9E95_RS00175;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS00175;product=RtT sRNA NZ_PYJW01000003.1 cmsearch exon 27491 27622 . + . ID=exon-C9E95_RS00175-1;Parent=rna-C9E95_RS00175;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS00175;product=RtT sRNA NZ_PYJW01000003.1 RefSeq gene 27657 27741 . + . ID=gene-C9E95_RS00180;Name=C9E95_RS00180;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS00180;old_locus_tag=C9E95_00175 NZ_PYJW01000003.1 tRNAscan-SE tRNA 27657 27741 . + . ID=rna-C9E95_RS00180;Parent=gene-C9E95_RS00180;anticodon=(pos:27691..27693);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS00180;product=tRNA-Tyr NZ_PYJW01000003.1 tRNAscan-SE exon 27657 27741 . + . ID=exon-C9E95_RS00180-1;Parent=rna-C9E95_RS00180;anticodon=(pos:27691..27693);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS00180;product=tRNA-Tyr NZ_PYJW01000003.1 RefSeq gene 27785 27896 . + . ID=gene-C9E95_RS00185;Name=C9E95_RS00185;end_range=27896,.;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E95_RS00185;old_locus_tag=C9E95_00180;partial=true NZ_PYJW01000003.1 cmsearch ncRNA 27785 27896 . + . ID=rna-C9E95_RS00185;Parent=gene-C9E95_RS00185;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;end_range=27896,.;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS00185;partial=true;product=RtT sRNA NZ_PYJW01000003.1 cmsearch exon 27785 27896 . + . ID=exon-C9E95_RS00185-1;Parent=rna-C9E95_RS00185;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;end_range=27896,.;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS00185;partial=true;product=RtT sRNA ##sequence-region NZ_PYJW01000074.1 1 27243 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000074.1 RefSeq region 1 27243 . + . ID=NZ_PYJW01000074.1:1..27243;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000074.1 RefSeq gene 253 1437 . - . ID=gene-C9E95_RS07365;Name=C9E95_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07365;old_locus_tag=C9E95_07540 NZ_PYJW01000074.1 Protein Homology CDS 253 1437 . - 0 ID=cds-WP_000233263.1;Parent=gene-C9E95_RS07365;Dbxref=GenBank:WP_000233263.1;Name=WP_000233263.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463374.1;locus_tag=C9E95_RS07365;product=MFS transporter;protein_id=WP_000233263.1;transl_table=11 NZ_PYJW01000074.1 RefSeq gene 1646 2917 . - . ID=gene-C9E95_RS07370;Name=C9E95_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07370;old_locus_tag=C9E95_07545 NZ_PYJW01000074.1 Protein Homology CDS 1646 2917 . - 0 ID=cds-WP_023993201.1;Parent=gene-C9E95_RS07370;Dbxref=GenBank:WP_023993201.1;Name=WP_023993201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463375.1;locus_tag=C9E95_RS07370;product=DUF445 domain-containing protein;protein_id=WP_023993201.1;transl_table=11 NZ_PYJW01000074.1 RefSeq gene 3004 4245 . - . ID=gene-C9E95_RS07375;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=C9E95_RS07375;old_locus_tag=C9E95_07550 NZ_PYJW01000074.1 Protein Homology CDS 3004 4245 . - 0 ID=cds-WP_080203719.1;Parent=gene-C9E95_RS07375;Dbxref=GenBank:WP_080203719.1;Name=WP_080203719.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463376.1;locus_tag=C9E95_RS07375;product=multidrug efflux MFS transporter MdtM;protein_id=WP_080203719.1;transl_table=11 NZ_PYJW01000074.1 RefSeq gene 4724 5677 . + . ID=gene-C9E95_RS07380;Name=C9E95_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07380;old_locus_tag=C9E95_07555 NZ_PYJW01000074.1 Protein Homology CDS 4724 5677 . + 0 ID=cds-WP_000750003.1;Parent=gene-C9E95_RS07380;Dbxref=GenBank:WP_000750003.1;Name=WP_000750003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=C9E95_RS07380;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000750003.1;transl_table=11 NZ_PYJW01000074.1 RefSeq gene 5858 7228 . + . ID=gene-C9E95_RS07385;Name=C9E95_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07385;old_locus_tag=C9E95_07560 NZ_PYJW01000074.1 Protein Homology CDS 5858 7228 . + 0 ID=cds-WP_080203720.1;Parent=gene-C9E95_RS07385;Dbxref=GenBank:WP_080203720.1;Name=WP_080203720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463378.1;locus_tag=C9E95_RS07385;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_080203720.1;transl_table=11 NZ_PYJW01000074.1 RefSeq gene 7324 7467 . - . ID=gene-C9E95_RS07390;Name=C9E95_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07390;old_locus_tag=C9E95_07565 NZ_PYJW01000074.1 Protein Homology CDS 7324 7467 . - 0 ID=cds-WP_001541460.1;Parent=gene-C9E95_RS07390;Dbxref=GenBank:WP_001541460.1;Name=WP_001541460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463379.1;locus_tag=C9E95_RS07390;product=hypothetical protein;protein_id=WP_001541460.1;transl_table=11 NZ_PYJW01000074.1 RefSeq gene 7434 7598 . + . ID=gene-C9E95_RS07395;Name=yjiS;gbkey=Gene;gene=yjiS;gene_biotype=protein_coding;locus_tag=C9E95_RS07395;old_locus_tag=C9E95_07570 NZ_PYJW01000074.1 Protein Homology CDS 7434 7598 . + 0 ID=cds-WP_000397917.1;Parent=gene-C9E95_RS07395;Dbxref=GenBank:WP_000397917.1;Name=WP_000397917.1;gbkey=CDS;gene=yjiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463380.1;locus_tag=C9E95_RS07395;product=DUF1127 domain-containing protein YjiS;protein_id=WP_000397917.1;transl_table=11 NZ_PYJW01000074.1 RefSeq gene 7673 8374 . - . ID=gene-C9E95_RS07400;Name=C9E95_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07400;old_locus_tag=C9E95_07575 NZ_PYJW01000074.1 Protein Homology CDS 7673 8374 . - 0 ID=cds-WP_001237617.1;Parent=gene-C9E95_RS07400;Dbxref=GenBank:WP_001237617.1;Name=WP_001237617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463381.1;locus_tag=C9E95_RS07400;product=hypothetical protein;protein_id=WP_001237617.1;transl_table=11 NZ_PYJW01000074.1 RefSeq gene 8448 8780 . - . ID=gene-C9E95_RS07405;Name=symE;gbkey=Gene;gene=symE;gene_biotype=protein_coding;locus_tag=C9E95_RS07405;old_locus_tag=C9E95_07580 NZ_PYJW01000074.1 Protein Homology CDS 8448 8780 . - 0 ID=cds-WP_080203721.1;Parent=gene-C9E95_RS07405;Dbxref=GenBank:WP_080203721.1;Name=WP_080203721.1;gbkey=CDS;gene=symE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463382.1;locus_tag=C9E95_RS07405;product=endoribonuclease SymE;protein_id=WP_080203721.1;transl_table=11 NZ_PYJW01000074.1 RefSeq gene 9106 9747 . - . ID=gene-C9E95_RS07410;Name=C9E95_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07410;old_locus_tag=C9E95_07585 NZ_PYJW01000074.1 Protein Homology CDS 9106 9747 . - 0 ID=cds-WP_023227822.1;Parent=gene-C9E95_RS07410;Dbxref=GenBank:WP_023227822.1;Name=WP_023227822.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727645.1;locus_tag=C9E95_RS07410;product=LysE family translocator;protein_id=WP_023227822.1;transl_table=11 NZ_PYJW01000074.1 RefSeq gene 9795 10610 . - . ID=gene-C9E95_RS07415;Name=C9E95_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07415;old_locus_tag=C9E95_07590 NZ_PYJW01000074.1 Protein Homology CDS 9795 10610 . - 0 ID=cds-WP_001627708.1;Parent=gene-C9E95_RS07415;Dbxref=GenBank:WP_001627708.1;Name=WP_001627708.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001128428.1;locus_tag=C9E95_RS07415;product=AraC family transcriptional regulator;protein_id=WP_001627708.1;transl_table=11 NZ_PYJW01000074.1 RefSeq gene 10648 11604 . - . ID=gene-C9E95_RS07420;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=C9E95_RS07420;old_locus_tag=C9E95_07595 NZ_PYJW01000074.1 Protein Homology CDS 10648 11604 . - 0 ID=cds-WP_023993199.1;Parent=gene-C9E95_RS07420;Dbxref=GenBank:WP_023993199.1;Name=WP_023993199.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463389.1;locus_tag=C9E95_RS07420;product=GTPase;protein_id=WP_023993199.1;transl_table=11 NZ_PYJW01000074.1 RefSeq gene 11615 11818 . - . ID=gene-C9E95_RS07425;Name=C9E95_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07425;old_locus_tag=C9E95_07600 NZ_PYJW01000074.1 Protein Homology CDS 11615 11818 . - 0 ID=cds-WP_000460616.1;Parent=gene-C9E95_RS07425;Dbxref=GenBank:WP_000460616.1;Name=WP_000460616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463390.1;locus_tag=C9E95_RS07425;product=YbdD/YjiX family protein;protein_id=WP_000460616.1;transl_table=11 NZ_PYJW01000074.1 RefSeq gene 11913 14063 . - . ID=gene-C9E95_RS07430;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=C9E95_RS07430;old_locus_tag=C9E95_07605 NZ_PYJW01000074.1 Protein Homology CDS 11913 14063 . - 0 ID=cds-WP_000379929.1;Parent=gene-C9E95_RS07430;Dbxref=GenBank:WP_000379929.1;Name=WP_000379929.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463391.1;locus_tag=C9E95_RS07430;product=pyruvate/proton symporter BtsT;protein_id=WP_000379929.1;transl_table=11 NZ_PYJW01000074.1 RefSeq gene 14430 16091 . + . ID=gene-C9E95_RS07435;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=C9E95_RS07435;old_locus_tag=C9E95_07610 NZ_PYJW01000074.1 Protein Homology CDS 14430 16091 . + 0 ID=cds-WP_000919519.1;Parent=gene-C9E95_RS07435;Dbxref=GenBank:WP_000919519.1;Name=WP_000919519.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=C9E95_RS07435;product=methyl-accepting chemotaxis protein;protein_id=WP_000919519.1;transl_table=11 NZ_PYJW01000074.1 RefSeq gene 16260 18551 . - . ID=gene-C9E95_RS07440;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=C9E95_RS07440;old_locus_tag=C9E95_07615 NZ_PYJW01000074.1 Protein Homology CDS 16260 18551 . - 0 ID=cds-WP_080219708.1;Parent=gene-C9E95_RS07440;Dbxref=GenBank:WP_080219708.1;Name=WP_080219708.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418779.2;locus_tag=C9E95_RS07440;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_080219708.1;transl_table=11 NZ_PYJW01000074.1 RefSeq gene 18834 19295 . - . ID=gene-C9E95_RS07445;Name=C9E95_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07445;old_locus_tag=C9E95_07620 NZ_PYJW01000074.1 Protein Homology CDS 18834 19295 . - 0 ID=cds-WP_001090314.1;Parent=gene-C9E95_RS07445;Dbxref=GenBank:WP_001090314.1;Name=WP_001090314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463401.1;locus_tag=C9E95_RS07445;product=DUF2501 domain-containing protein;protein_id=WP_001090314.1;transl_table=11 NZ_PYJW01000074.1 RefSeq gene 19353 20090 . - . ID=gene-C9E95_RS07450;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=C9E95_RS07450;old_locus_tag=C9E95_07625 NZ_PYJW01000074.1 Protein Homology CDS 19353 20090 . - 0 ID=cds-WP_000799924.1;Parent=gene-C9E95_RS07450;Dbxref=GenBank:WP_000799924.1;Name=WP_000799924.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463402.1;locus_tag=C9E95_RS07450;product=DNA replication protein DnaC;protein_id=WP_000799924.1;transl_table=11 NZ_PYJW01000074.1 RefSeq gene 20093 20632 . - . ID=gene-C9E95_RS07455;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=C9E95_RS07455;old_locus_tag=C9E95_07630 NZ_PYJW01000074.1 Protein Homology CDS 20093 20632 . - 0 ID=cds-WP_000098578.1;Parent=gene-C9E95_RS07455;Dbxref=GenBank:WP_000098578.1;Name=WP_000098578.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463403.1;locus_tag=C9E95_RS07455;product=primosomal protein DnaT;protein_id=WP_000098578.1;transl_table=11 NZ_PYJW01000074.1 RefSeq gene 20725 21198 . - . ID=gene-C9E95_RS07460;Name=C9E95_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07460;old_locus_tag=C9E95_07635 NZ_PYJW01000074.1 Protein Homology CDS 20725 21198 . - 0 ID=cds-WP_000511329.1;Parent=gene-C9E95_RS07460;Dbxref=GenBank:WP_000511329.1;Name=WP_000511329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463404.1;locus_tag=C9E95_RS07460;product=threonine/serine exporter;protein_id=WP_000511329.1;transl_table=11 NZ_PYJW01000074.1 RefSeq gene 21189 21965 . - . ID=gene-C9E95_RS07465;Name=C9E95_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07465;old_locus_tag=C9E95_07640 NZ_PYJW01000074.1 Protein Homology CDS 21189 21965 . - 0 ID=cds-WP_001727653.1;Parent=gene-C9E95_RS07465;Dbxref=GenBank:WP_001727653.1;Name=WP_001727653.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=C9E95_RS07465;product=threonine/serine ThrE exporter family protein;protein_id=WP_001727653.1;transl_table=11 NZ_PYJW01000074.1 RefSeq gene 22678 23403 . + . ID=gene-C9E95_RS07470;Name=C9E95_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07470;old_locus_tag=C9E95_07645 NZ_PYJW01000074.1 Protein Homology CDS 22678 23403 . + 0 ID=cds-WP_000936661.1;Parent=gene-C9E95_RS07470;Dbxref=GenBank:WP_000936661.1;Name=WP_000936661.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463406.1;locus_tag=C9E95_RS07470;product=helix-turn-helix transcriptional regulator;protein_id=WP_000936661.1;transl_table=11 NZ_PYJW01000074.1 RefSeq gene 23364 24038 . + . ID=gene-C9E95_RS07475;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=C9E95_RS07475;old_locus_tag=C9E95_07650 NZ_PYJW01000074.1 Protein Homology CDS 23364 24038 . + 0 ID=cds-WP_000431546.1;Parent=gene-C9E95_RS07475;Dbxref=GenBank:WP_000431546.1;Name=WP_000431546.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463407.3;locus_tag=C9E95_RS07475;product=DNA-binding transcriptional activator BglJ;protein_id=WP_000431546.1;transl_table=11 NZ_PYJW01000074.1 RefSeq gene 24089 24547 . - . ID=gene-C9E95_RS07480;Name=C9E95_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07480;old_locus_tag=C9E95_07655 NZ_PYJW01000074.1 Protein Homology CDS 24089 24547 . - 0 ID=cds-WP_000058276.1;Parent=gene-C9E95_RS07480;Dbxref=GenBank:WP_000058276.1;Name=WP_000058276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463408.1;locus_tag=C9E95_RS07480;product=YbaK/EbsC family protein;protein_id=WP_000058276.1;transl_table=11 NZ_PYJW01000074.1 RefSeq gene 24698 25486 . - . ID=gene-C9E95_RS07485;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=C9E95_RS07485;old_locus_tag=C9E95_07660 NZ_PYJW01000074.1 Protein Homology CDS 24698 25486 . - 0 ID=cds-WP_023207052.1;Parent=gene-C9E95_RS07485;Dbxref=GenBank:WP_023207052.1;Name=WP_023207052.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463409.1;locus_tag=C9E95_RS07485;product=siderophore-iron reductase FhuF;protein_id=WP_023207052.1;transl_table=11 NZ_PYJW01000074.1 RefSeq gene 25607 26671 . - . ID=gene-C9E95_RS07490;Name=C9E95_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07490;old_locus_tag=C9E95_07665 NZ_PYJW01000074.1 Protein Homology CDS 25607 26671 . - 0 ID=cds-WP_052932330.1;Parent=gene-C9E95_RS07490;Dbxref=GenBank:WP_052932330.1;Name=WP_052932330.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463410.1;locus_tag=C9E95_RS07490;product=GGDEF domain-containing protein;protein_id=WP_052932330.1;transl_table=11 NZ_PYJW01000074.1 RefSeq gene 26922 27158 . + . ID=gene-C9E95_RS07495;Name=C9E95_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07495;old_locus_tag=C9E95_07670 NZ_PYJW01000074.1 Protein Homology CDS 26922 27158 . + 0 ID=cds-WP_000941879.1;Parent=gene-C9E95_RS07495;Dbxref=GenBank:WP_000941879.1;Name=WP_000941879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463411.1;locus_tag=C9E95_RS07495;product=DUF1435 domain-containing protein;protein_id=WP_000941879.1;transl_table=11 ##sequence-region NZ_PYJW01000144.1 1 26139 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000144.1 RefSeq region 1 26139 . + . ID=NZ_PYJW01000144.1:1..26139;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000144.1 RefSeq gene 1 92 . + . ID=gene-C9E95_RS17210;Name=C9E95_RS17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17210;old_locus_tag=C9E95_17625;partial=true;start_range=.,1 NZ_PYJW01000144.1 Protein Homology CDS 1 92 . + 2 ID=cds-WP_001676084.1;Parent=gene-C9E95_RS17210;Dbxref=GenBank:WP_001676084.1;Name=WP_001676084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=C9E95_RS17210;partial=true;product=elongation factor Tu;protein_id=WP_001676084.1;start_range=.,1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 277 471 . + . ID=gene-C9E95_RS17215;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=C9E95_RS17215;old_locus_tag=C9E95_17640 NZ_PYJW01000144.1 Protein Homology CDS 277 471 . + 0 ID=cds-WP_000289082.1;Parent=gene-C9E95_RS17215;Dbxref=GenBank:WP_000289082.1;Name=WP_000289082.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462348.1;locus_tag=C9E95_RS17215;product=bacterioferritin-associated ferredoxin;protein_id=WP_000289082.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 544 1020 . + . ID=gene-C9E95_RS17220;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=C9E95_RS17220;old_locus_tag=C9E95_17645 NZ_PYJW01000144.1 Protein Homology CDS 544 1020 . + 0 ID=cds-WP_000675530.1;Parent=gene-C9E95_RS17220;Dbxref=GenBank:WP_000675530.1;Name=WP_000675530.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462347.1;locus_tag=C9E95_RS17220;product=bacterioferritin;protein_id=WP_000675530.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 1017 1484 . - . ID=gene-C9E95_RS17225;Name=hopD;gbkey=Gene;gene=hopD;gene_biotype=protein_coding;locus_tag=C9E95_RS17225;old_locus_tag=C9E95_17650 NZ_PYJW01000144.1 Protein Homology CDS 1017 1484 . - 0 ID=cds-WP_000495848.1;Parent=gene-C9E95_RS17225;Dbxref=GenBank:WP_000495848.1;Name=WP_000495848.1;gbkey=CDS;gene=hopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462346.1;locus_tag=C9E95_RS17225;product=prepilin peptidase;protein_id=WP_000495848.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 1864 2175 . + . ID=gene-C9E95_RS17230;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=C9E95_RS17230;old_locus_tag=C9E95_17660 NZ_PYJW01000144.1 Protein Homology CDS 1864 2175 . + 0 ID=cds-WP_001181005.1;Parent=gene-C9E95_RS17230;Dbxref=GenBank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=C9E95_RS17230;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 2208 2837 . + . ID=gene-C9E95_RS17235;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=C9E95_RS17235;old_locus_tag=C9E95_17665 NZ_PYJW01000144.1 Protein Homology CDS 2208 2837 . + 0 ID=cds-WP_000579838.1;Parent=gene-C9E95_RS17235;Dbxref=GenBank:WP_000579838.1;Name=WP_000579838.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=C9E95_RS17235;product=50S ribosomal protein L3;protein_id=WP_000579838.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 2848 3453 . + . ID=gene-C9E95_RS17240;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=C9E95_RS17240;old_locus_tag=C9E95_17670 NZ_PYJW01000144.1 Protein Homology CDS 2848 3453 . + 0 ID=cds-WP_000424395.1;Parent=gene-C9E95_RS17240;Dbxref=GenBank:WP_000424395.1;Name=WP_000424395.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=C9E95_RS17240;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 3450 3752 . + . ID=gene-C9E95_RS17245;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=C9E95_RS17245;old_locus_tag=C9E95_17675 NZ_PYJW01000144.1 Protein Homology CDS 3450 3752 . + 0 ID=cds-WP_000617546.1;Parent=gene-C9E95_RS17245;Dbxref=GenBank:WP_000617546.1;Name=WP_000617546.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=C9E95_RS17245;product=50S ribosomal protein L23;protein_id=WP_000617546.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 3770 4591 . + . ID=gene-C9E95_RS17250;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=C9E95_RS17250;old_locus_tag=C9E95_17680 NZ_PYJW01000144.1 Protein Homology CDS 3770 4591 . + 0 ID=cds-WP_000301869.1;Parent=gene-C9E95_RS17250;Dbxref=GenBank:WP_000301869.1;Name=WP_000301869.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=C9E95_RS17250;product=50S ribosomal protein L2;protein_id=WP_000301869.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 4608 4886 . + . ID=gene-C9E95_RS17255;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=C9E95_RS17255;old_locus_tag=C9E95_17685 NZ_PYJW01000144.1 Protein Homology CDS 4608 4886 . + 0 ID=cds-WP_001138115.1;Parent=gene-C9E95_RS17255;Dbxref=GenBank:WP_001138115.1;Name=WP_001138115.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=C9E95_RS17255;product=30S ribosomal protein S19;protein_id=WP_001138115.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 4901 5233 . + . ID=gene-C9E95_RS17260;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=C9E95_RS17260;old_locus_tag=C9E95_17690 NZ_PYJW01000144.1 Protein Homology CDS 4901 5233 . + 0 ID=cds-WP_000447529.1;Parent=gene-C9E95_RS17260;Dbxref=GenBank:WP_000447529.1;Name=WP_000447529.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=C9E95_RS17260;product=50S ribosomal protein L22;protein_id=WP_000447529.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 5251 5952 . + . ID=gene-C9E95_RS17265;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=C9E95_RS17265;old_locus_tag=C9E95_17695 NZ_PYJW01000144.1 Protein Homology CDS 5251 5952 . + 0 ID=cds-WP_000529945.1;Parent=gene-C9E95_RS17265;Dbxref=GenBank:WP_000529945.1;Name=WP_000529945.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=C9E95_RS17265;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 5965 6375 . + . ID=gene-C9E95_RS17270;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=C9E95_RS17270;old_locus_tag=C9E95_17700 NZ_PYJW01000144.1 Protein Homology CDS 5965 6375 . + 0 ID=cds-WP_000941208.1;Parent=gene-C9E95_RS17270;Dbxref=GenBank:WP_000941208.1;Name=WP_000941208.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=C9E95_RS17270;product=50S ribosomal protein L16;protein_id=WP_000941208.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 6375 6566 . + . ID=gene-C9E95_RS17275;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=C9E95_RS17275;old_locus_tag=C9E95_17705 NZ_PYJW01000144.1 Protein Homology CDS 6375 6566 . + 0 ID=cds-WP_000644742.1;Parent=gene-C9E95_RS17275;Dbxref=GenBank:WP_000644742.1;Name=WP_000644742.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=C9E95_RS17275;product=50S ribosomal protein L29;protein_id=WP_000644742.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 6566 6820 . + . ID=gene-C9E95_RS17280;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=C9E95_RS17280;old_locus_tag=C9E95_17710 NZ_PYJW01000144.1 Protein Homology CDS 6566 6820 . + 0 ID=cds-WP_000130101.1;Parent=gene-C9E95_RS17280;Dbxref=GenBank:WP_000130101.1;Name=WP_000130101.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=C9E95_RS17280;product=30S ribosomal protein S17;protein_id=WP_000130101.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 6985 7356 . + . ID=gene-C9E95_RS17285;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=C9E95_RS17285;old_locus_tag=C9E95_17715 NZ_PYJW01000144.1 Protein Homology CDS 6985 7356 . + 0 ID=cds-WP_000613954.1;Parent=gene-C9E95_RS17285;Dbxref=GenBank:WP_000613954.1;Name=WP_000613954.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=C9E95_RS17285;product=50S ribosomal protein L14;protein_id=WP_000613954.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 7367 7681 . + . ID=gene-C9E95_RS17290;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=C9E95_RS17290;old_locus_tag=C9E95_17720 NZ_PYJW01000144.1 Protein Homology CDS 7367 7681 . + 0 ID=cds-WP_000729185.1;Parent=gene-C9E95_RS17290;Dbxref=GenBank:WP_000729185.1;Name=WP_000729185.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=C9E95_RS17290;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 7696 8235 . + . ID=gene-C9E95_RS17295;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=C9E95_RS17295;old_locus_tag=C9E95_17725 NZ_PYJW01000144.1 Protein Homology CDS 7696 8235 . + 0 ID=cds-WP_001096206.1;Parent=gene-C9E95_RS17295;Dbxref=GenBank:WP_001096206.1;Name=WP_001096206.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=C9E95_RS17295;product=50S ribosomal protein L5;protein_id=WP_001096206.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 8250 8555 . + . ID=gene-C9E95_RS17300;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=C9E95_RS17300;old_locus_tag=C9E95_17730 NZ_PYJW01000144.1 Protein Homology CDS 8250 8555 . + 0 ID=cds-WP_001118932.1;Parent=gene-C9E95_RS17300;Dbxref=GenBank:WP_001118932.1;Name=WP_001118932.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=C9E95_RS17300;product=30S ribosomal protein S14;protein_id=WP_001118932.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 8589 8981 . + . ID=gene-C9E95_RS17305;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=C9E95_RS17305;old_locus_tag=C9E95_17735 NZ_PYJW01000144.1 Protein Homology CDS 8589 8981 . + 0 ID=cds-WP_000062611.1;Parent=gene-C9E95_RS17305;Dbxref=GenBank:WP_000062611.1;Name=WP_000062611.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=C9E95_RS17305;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 8994 9527 . + . ID=gene-C9E95_RS17310;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=C9E95_RS17310;old_locus_tag=C9E95_17740 NZ_PYJW01000144.1 Protein Homology CDS 8994 9527 . + 0 ID=cds-WP_000091939.1;Parent=gene-C9E95_RS17310;Dbxref=GenBank:WP_000091939.1;Name=WP_000091939.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=C9E95_RS17310;product=50S ribosomal protein L6;protein_id=WP_000091939.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 9537 9890 . + . ID=gene-C9E95_RS17315;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=C9E95_RS17315;old_locus_tag=C9E95_17745 NZ_PYJW01000144.1 Protein Homology CDS 9537 9890 . + 0 ID=cds-WP_000358956.1;Parent=gene-C9E95_RS17315;Dbxref=GenBank:WP_000358956.1;Name=WP_000358956.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=C9E95_RS17315;product=50S ribosomal protein L18;protein_id=WP_000358956.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 9905 10408 . + . ID=gene-C9E95_RS17320;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=C9E95_RS17320;old_locus_tag=C9E95_17750 NZ_PYJW01000144.1 Protein Homology CDS 9905 10408 . + 0 ID=cds-WP_000940121.1;Parent=gene-C9E95_RS17320;Dbxref=GenBank:WP_000940121.1;Name=WP_000940121.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=C9E95_RS17320;product=30S ribosomal protein S5;protein_id=WP_000940121.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 10412 10591 . + . ID=gene-C9E95_RS17325;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=C9E95_RS17325;old_locus_tag=C9E95_17755 NZ_PYJW01000144.1 Protein Homology CDS 10412 10591 . + 0 ID=cds-WP_001140434.1;Parent=gene-C9E95_RS17325;Dbxref=GenBank:WP_001140434.1;Name=WP_001140434.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=C9E95_RS17325;product=50S ribosomal protein L30;protein_id=WP_001140434.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 10595 11029 . + . ID=gene-C9E95_RS17330;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=C9E95_RS17330;old_locus_tag=C9E95_17760 NZ_PYJW01000144.1 Protein Homology CDS 10595 11029 . + 0 ID=cds-WP_001238917.1;Parent=gene-C9E95_RS17330;Dbxref=GenBank:WP_001238917.1;Name=WP_001238917.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=C9E95_RS17330;product=50S ribosomal protein L15;protein_id=WP_001238917.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 11037 12368 . + . ID=gene-C9E95_RS17335;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=C9E95_RS17335;old_locus_tag=C9E95_17765 NZ_PYJW01000144.1 Protein Homology CDS 11037 12368 . + 0 ID=cds-WP_001118864.1;Parent=gene-C9E95_RS17335;Dbxref=GenBank:WP_001118864.1;Name=WP_001118864.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=C9E95_RS17335;product=preprotein translocase subunit SecY;protein_id=WP_001118864.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 12400 12516 . + . ID=gene-C9E95_RS17340;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=C9E95_RS17340;old_locus_tag=C9E95_17770 NZ_PYJW01000144.1 Protein Homology CDS 12400 12516 . + 0 ID=cds-WP_000868187.1;Parent=gene-C9E95_RS17340;Dbxref=GenBank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=C9E95_RS17340;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 12663 13019 . + . ID=gene-C9E95_RS17345;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=C9E95_RS17345;old_locus_tag=C9E95_17775 NZ_PYJW01000144.1 Protein Homology CDS 12663 13019 . + 0 ID=cds-WP_000090780.1;Parent=gene-C9E95_RS17345;Dbxref=GenBank:WP_000090780.1;Name=WP_000090780.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=C9E95_RS17345;product=30S ribosomal protein S13;protein_id=WP_000090780.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 13036 13425 . + . ID=gene-C9E95_RS17350;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=C9E95_RS17350;old_locus_tag=C9E95_17780 NZ_PYJW01000144.1 Protein Homology CDS 13036 13425 . + 0 ID=cds-WP_001029758.1;Parent=gene-C9E95_RS17350;Dbxref=GenBank:WP_001029758.1;Name=WP_001029758.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=C9E95_RS17350;product=30S ribosomal protein S11;protein_id=WP_001029758.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 13459 14079 . + . ID=gene-C9E95_RS17355;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=C9E95_RS17355;old_locus_tag=C9E95_17785 NZ_PYJW01000144.1 Protein Homology CDS 13459 14079 . + 0 ID=cds-WP_000135226.1;Parent=gene-C9E95_RS17355;Dbxref=GenBank:WP_000135226.1;Name=WP_000135226.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=C9E95_RS17355;product=30S ribosomal protein S4;protein_id=WP_000135226.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 14105 15094 . + . ID=gene-C9E95_RS17360;Name=C9E95_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17360;old_locus_tag=C9E95_17790 NZ_PYJW01000144.1 Protein Homology CDS 14105 15094 . + 0 ID=cds-WP_001162094.1;Parent=gene-C9E95_RS17360;Dbxref=GenBank:WP_001162094.1;Name=WP_001162094.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=C9E95_RS17360;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 15135 15518 . + . ID=gene-C9E95_RS17365;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=C9E95_RS17365;old_locus_tag=C9E95_17795 NZ_PYJW01000144.1 Protein Homology CDS 15135 15518 . + 0 ID=cds-WP_001216370.1;Parent=gene-C9E95_RS17365;Dbxref=GenBank:WP_001216370.1;Name=WP_001216370.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462318.1;locus_tag=C9E95_RS17365;product=50S ribosomal protein L17;protein_id=WP_001216370.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 15626 15994 . + . ID=gene-C9E95_RS17370;Name=C9E95_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17370;old_locus_tag=C9E95_17800 NZ_PYJW01000144.1 Protein Homology CDS 15626 15994 . + 0 ID=cds-WP_080204123.1;Parent=gene-C9E95_RS17370;Dbxref=GenBank:WP_080204123.1;Name=WP_080204123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462317.1;locus_tag=C9E95_RS17370;product=DUF1992 domain-containing protein;protein_id=WP_080204123.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 16005 16430 . + . ID=gene-C9E95_RS17375;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=C9E95_RS17375;old_locus_tag=C9E95_17805 NZ_PYJW01000144.1 Protein Homology CDS 16005 16430 . + 0 ID=cds-WP_000285588.1;Parent=gene-C9E95_RS17375;Dbxref=GenBank:WP_000285588.1;Name=WP_000285588.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462316.1;locus_tag=C9E95_RS17375;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_000285588.1;transl_table=11 NZ_PYJW01000144.1 RefSeq pseudogene 16488 16691 . + . ID=gene-C9E95_RS17380;Name=C9E95_RS17380;end_range=16691,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS17380;old_locus_tag=C9E95_17810;partial=true;pseudo=true NZ_PYJW01000144.1 Protein Homology CDS 16488 16691 . + 0 ID=cds-C9E95_RS17380;Parent=gene-C9E95_RS17380;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=16691,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588467.1;locus_tag=C9E95_RS17380;partial=true;product=alternative ribosome-rescue factor A;pseudo=true;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 16693 17106 . - . ID=gene-C9E95_RS17385;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=C9E95_RS17385;old_locus_tag=C9E95_17815 NZ_PYJW01000144.1 Protein Homology CDS 16693 17106 . - 0 ID=cds-WP_000008119.1;Parent=gene-C9E95_RS17385;Dbxref=GenBank:WP_000008119.1;Name=WP_000008119.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462314.1;locus_tag=C9E95_RS17385;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_000008119.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 17248 18624 . - . ID=gene-C9E95_RS17390;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=C9E95_RS17390;old_locus_tag=C9E95_17820 NZ_PYJW01000144.1 Protein Homology CDS 17248 18624 . - 0 ID=cds-WP_000691374.1;Parent=gene-C9E95_RS17390;Dbxref=GenBank:WP_000691374.1;Name=WP_000691374.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=C9E95_RS17390;product=Trk system potassium transporter TrkA;protein_id=WP_000691374.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 18646 19935 . - . ID=gene-C9E95_RS17395;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=C9E95_RS17395;old_locus_tag=C9E95_17825 NZ_PYJW01000144.1 Protein Homology CDS 18646 19935 . - 0 ID=cds-WP_023994027.1;Parent=gene-C9E95_RS17395;Dbxref=GenBank:WP_023994027.1;Name=WP_023994027.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462312.1;locus_tag=C9E95_RS17395;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_023994027.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 19987 20934 . - . ID=gene-C9E95_RS17400;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=C9E95_RS17400;old_locus_tag=C9E95_17830 NZ_PYJW01000144.1 Protein Homology CDS 19987 20934 . - 0 ID=cds-WP_001285174.1;Parent=gene-C9E95_RS17400;Dbxref=GenBank:WP_001285174.1;Name=WP_001285174.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462311.1;locus_tag=C9E95_RS17400;product=methionyl-tRNA formyltransferase;protein_id=WP_001285174.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 20950 21459 . - . ID=gene-C9E95_RS17405;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=C9E95_RS17405;old_locus_tag=C9E95_17835 NZ_PYJW01000144.1 Protein Homology CDS 20950 21459 . - 0 ID=cds-WP_000114987.1;Parent=gene-C9E95_RS17405;Dbxref=GenBank:WP_000114987.1;Name=WP_000114987.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462310.1;locus_tag=C9E95_RS17405;product=peptide deformylase;protein_id=WP_000114987.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 21591 22715 . + . ID=gene-C9E95_RS17410;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=C9E95_RS17410;old_locus_tag=C9E95_17840 NZ_PYJW01000144.1 Protein Homology CDS 21591 22715 . + 0 ID=cds-WP_023994026.1;Parent=gene-C9E95_RS17410;Dbxref=GenBank:WP_023994026.1;Name=WP_023994026.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462309.1;locus_tag=C9E95_RS17410;product=DNA-protecting protein DprA;protein_id=WP_023994026.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 22687 23160 . + . ID=gene-C9E95_RS17415;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=C9E95_RS17415;old_locus_tag=C9E95_17845 NZ_PYJW01000144.1 Protein Homology CDS 22687 23160 . + 0 ID=cds-WP_135369870.1;Parent=gene-C9E95_RS17415;Dbxref=GenBank:WP_135369870.1;Name=WP_135369870.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=C9E95_RS17415;product=DUF494 family protein Smg;protein_id=WP_135369870.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 23187 23729 . + . ID=gene-C9E95_RS17420;Name=C9E95_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17420;old_locus_tag=C9E95_17850 NZ_PYJW01000144.1 Protein Homology CDS 23187 23729 . + 0 ID=cds-WP_001129708.1;Parent=gene-C9E95_RS17420;Dbxref=GenBank:WP_001129708.1;Name=WP_001129708.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462307.1;locus_tag=C9E95_RS17420;product=DNA topoisomerase family protein;protein_id=WP_001129708.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 23734 24306 . + . ID=gene-C9E95_RS17425;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=C9E95_RS17425;old_locus_tag=C9E95_17855 NZ_PYJW01000144.1 Protein Homology CDS 23734 24306 . + 0 ID=cds-WP_001063613.1;Parent=gene-C9E95_RS17425;Dbxref=GenBank:WP_001063613.1;Name=WP_001063613.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462306.1;locus_tag=C9E95_RS17425;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_001063613.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 24311 25129 . + . ID=gene-C9E95_RS17430;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=C9E95_RS17430;old_locus_tag=C9E95_17860 NZ_PYJW01000144.1 Protein Homology CDS 24311 25129 . + 0 ID=cds-WP_023994025.1;Parent=gene-C9E95_RS17430;Dbxref=GenBank:WP_023994025.1;Name=WP_023994025.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462305.1;locus_tag=C9E95_RS17430;product=shikimate dehydrogenase;protein_id=WP_023994025.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 25126 25383 . + . ID=gene-C9E95_RS17435;Name=C9E95_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17435;old_locus_tag=C9E95_17865 NZ_PYJW01000144.1 Protein Homology CDS 25126 25383 . + 0 ID=cds-WP_001070575.1;Parent=gene-C9E95_RS17435;Dbxref=GenBank:WP_001070575.1;Name=WP_001070575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462304.1;locus_tag=C9E95_RS17435;product=DUF1488 domain-containing protein;protein_id=WP_001070575.1;transl_table=11 NZ_PYJW01000144.1 RefSeq gene 25359 25913 . - . ID=gene-C9E95_RS17440;Name=C9E95_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17440;old_locus_tag=C9E95_17870 NZ_PYJW01000144.1 Protein Homology CDS 25359 25913 . - 0 ID=cds-WP_023994024.1;Parent=gene-C9E95_RS17440;Dbxref=GenBank:WP_023994024.1;Name=WP_023994024.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462303.1;locus_tag=C9E95_RS17440;product=gamma carbonic anhydrase family protein;protein_id=WP_023994024.1;transl_table=11 ##sequence-region NZ_PYJW01000043.1 1 26030 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000043.1 RefSeq region 1 26030 . + . ID=NZ_PYJW01000043.1:1..26030;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000043.1 RefSeq gene 79 558 . - . ID=gene-C9E95_RS03145;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=C9E95_RS03145;old_locus_tag=C9E95_03195 NZ_PYJW01000043.1 Protein Homology CDS 79 558 . - 0 ID=cds-WP_000624379.1;Parent=gene-C9E95_RS03145;Dbxref=GenBank:WP_000624379.1;Name=WP_000624379.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=C9E95_RS03145;product=type 3 dihydrofolate reductase;protein_id=WP_000624379.1;transl_table=11 NZ_PYJW01000043.1 RefSeq gene 756 2618 . - . ID=gene-C9E95_RS03150;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=C9E95_RS03150;old_locus_tag=C9E95_03205 NZ_PYJW01000043.1 Protein Homology CDS 756 2618 . - 0 ID=cds-WP_080204104.1;Parent=gene-C9E95_RS03150;Dbxref=GenBank:WP_080204104.1;Name=WP_080204104.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459091.1;locus_tag=C9E95_RS03150;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_080204104.1;transl_table=11 NZ_PYJW01000043.1 RefSeq gene 2611 3141 . - . ID=gene-C9E95_RS03155;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=C9E95_RS03155;old_locus_tag=C9E95_03210 NZ_PYJW01000043.1 Protein Homology CDS 2611 3141 . - 0 ID=cds-WP_080204103.1;Parent=gene-C9E95_RS03155;Dbxref=GenBank:WP_080204103.1;Name=WP_080204103.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=C9E95_RS03155;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_080204103.1;transl_table=11 NZ_PYJW01000043.1 RefSeq pseudogene 3263 3343 . + . ID=gene-C9E95_RS23695;Name=C9E95_RS23695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23695;old_locus_tag=C9E95_03215;partial=true;pseudo=true;start_range=.,3263 NZ_PYJW01000043.1 Protein Homology CDS 3263 3343 . + 0 ID=cds-C9E95_RS23695;Parent=gene-C9E95_RS23695;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=C9E95_RS23695;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3263;transl_table=11 NZ_PYJW01000043.1 RefSeq gene 3695 5584 . - . ID=gene-C9E95_RS03160;Name=C9E95_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03160;old_locus_tag=C9E95_03225 NZ_PYJW01000043.1 Protein Homology CDS 3695 5584 . - 0 ID=cds-WP_000066315.1;Parent=gene-C9E95_RS03160;Dbxref=GenBank:WP_000066315.1;Name=WP_000066315.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459089.1;locus_tag=C9E95_RS03160;product=sulfatase-like hydrolase/transferase;protein_id=WP_000066315.1;transl_table=11 NZ_PYJW01000043.1 RefSeq gene 6482 6772 . + . ID=gene-C9E95_RS03165;Name=srfN;gbkey=Gene;gene=srfN;gene_biotype=protein_coding;locus_tag=C9E95_RS03165;old_locus_tag=C9E95_03235 NZ_PYJW01000043.1 Protein Homology CDS 6482 6772 . + 0 ID=cds-WP_000745961.1;Parent=gene-C9E95_RS03165;Dbxref=GenBank:WP_000745961.1;Name=WP_000745961.1;gbkey=CDS;gene=srfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459087.1;locus_tag=C9E95_RS03165;product=DUF1471 family virulence protein SrfN;protein_id=WP_000745961.1;transl_table=11 NZ_PYJW01000043.1 RefSeq gene 6996 7412 . - . ID=gene-C9E95_RS03170;Name=C9E95_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03170;old_locus_tag=C9E95_03240 NZ_PYJW01000043.1 Protein Homology CDS 6996 7412 . - 0 ID=cds-WP_161460226.1;Parent=gene-C9E95_RS03170;Dbxref=GenBank:WP_161460226.1;Name=WP_161460226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459086.1;locus_tag=C9E95_RS03170;product=hypothetical protein;protein_id=WP_161460226.1;transl_table=11 NZ_PYJW01000043.1 RefSeq gene 7712 7942 . - . ID=gene-C9E95_RS03175;Name=C9E95_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03175;old_locus_tag=C9E95_03245 NZ_PYJW01000043.1 Protein Homology CDS 7712 7942 . - 0 ID=cds-WP_001172089.1;Parent=gene-C9E95_RS03175;Dbxref=GenBank:WP_001172089.1;Name=WP_001172089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459085.1;locus_tag=C9E95_RS03175;product=YgdI/YgdR family lipoprotein;protein_id=WP_001172089.1;transl_table=11 NZ_PYJW01000043.1 RefSeq gene 8031 9371 . - . ID=gene-C9E95_RS03180;Name=C9E95_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03180;old_locus_tag=C9E95_03250 NZ_PYJW01000043.1 Protein Homology CDS 8031 9371 . - 0 ID=cds-WP_001670709.1;Parent=gene-C9E95_RS03180;Dbxref=GenBank:WP_001670709.1;Name=WP_001670709.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459084.1;locus_tag=C9E95_RS03180;product=MFS transporter;protein_id=WP_001670709.1;transl_table=11 NZ_PYJW01000043.1 RefSeq gene 9518 9805 . - . ID=gene-C9E95_RS03185;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=C9E95_RS03185;old_locus_tag=C9E95_03255 NZ_PYJW01000043.1 Protein Homology CDS 9518 9805 . - 0 ID=cds-WP_000203736.1;Parent=gene-C9E95_RS03185;Dbxref=GenBank:WP_000203736.1;Name=WP_000203736.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459083.1;locus_tag=C9E95_RS03185;product=ferredoxin-like protein FixX;protein_id=WP_000203736.1;transl_table=11 NZ_PYJW01000043.1 RefSeq gene 9802 11088 . - . ID=gene-C9E95_RS03190;Name=C9E95_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03190;old_locus_tag=C9E95_03260 NZ_PYJW01000043.1 Protein Homology CDS 9802 11088 . - 0 ID=cds-WP_023228077.1;Parent=gene-C9E95_RS03190;Dbxref=GenBank:WP_023228077.1;Name=WP_023228077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459082.1;locus_tag=C9E95_RS03190;product=FAD-dependent oxidoreductase;protein_id=WP_023228077.1;transl_table=11 NZ_PYJW01000043.1 RefSeq gene 11138 12079 . - . ID=gene-C9E95_RS03195;Name=C9E95_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03195;old_locus_tag=C9E95_03265 NZ_PYJW01000043.1 Protein Homology CDS 11138 12079 . - 0 ID=cds-WP_023193565.1;Parent=gene-C9E95_RS03195;Dbxref=GenBank:WP_023193565.1;Name=WP_023193565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459081.1;locus_tag=C9E95_RS03195;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_023193565.1;transl_table=11 NZ_PYJW01000043.1 RefSeq gene 12095 12865 . - . ID=gene-C9E95_RS03200;Name=C9E95_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03200;old_locus_tag=C9E95_03270 NZ_PYJW01000043.1 Protein Homology CDS 12095 12865 . - 0 ID=cds-WP_000692185.1;Parent=gene-C9E95_RS03200;Dbxref=GenBank:WP_000692185.1;Name=WP_000692185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459080.1;locus_tag=C9E95_RS03200;product=electron transfer flavoprotein FixA;protein_id=WP_000692185.1;transl_table=11 NZ_PYJW01000043.1 RefSeq gene 13346 14863 . + . ID=gene-C9E95_RS03205;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=C9E95_RS03205;old_locus_tag=C9E95_03280 NZ_PYJW01000043.1 Protein Homology CDS 13346 14863 . + 0 ID=cds-WP_000787073.1;Parent=gene-C9E95_RS03205;Dbxref=GenBank:WP_000787073.1;Name=WP_000787073.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459079.1;locus_tag=C9E95_RS03205;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WP_000787073.1;transl_table=11 NZ_PYJW01000043.1 RefSeq gene 14898 16040 . + . ID=gene-C9E95_RS03210;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=C9E95_RS03210;old_locus_tag=C9E95_03285 NZ_PYJW01000043.1 Protein Homology CDS 14898 16040 . + 0 ID=cds-WP_000347134.1;Parent=gene-C9E95_RS03210;Dbxref=GenBank:WP_000347134.1;Name=WP_000347134.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=C9E95_RS03210;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_000347134.1;transl_table=11 NZ_PYJW01000043.1 RefSeq gene 16152 17369 . + . ID=gene-C9E95_RS03215;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=C9E95_RS03215;old_locus_tag=C9E95_03290 NZ_PYJW01000043.1 Protein Homology CDS 16152 17369 . + 0 ID=cds-WP_001016212.1;Parent=gene-C9E95_RS03215;Dbxref=GenBank:WP_001016212.1;Name=WP_001016212.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459077.1;locus_tag=C9E95_RS03215;product=L-carnitine CoA-transferase;protein_id=WP_001016212.1;transl_table=11 NZ_PYJW01000043.1 RefSeq gene 17432 18985 . + . ID=gene-C9E95_RS03220;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=C9E95_RS03220;old_locus_tag=C9E95_03295 NZ_PYJW01000043.1 Protein Homology CDS 17432 18985 . + 0 ID=cds-WP_001527592.1;Parent=gene-C9E95_RS03220;Dbxref=GenBank:WP_001527592.1;Name=WP_001527592.1;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459076.1;locus_tag=C9E95_RS03220;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_001527592.1;transl_table=11 NZ_PYJW01000043.1 RefSeq gene 19039 19824 . + . ID=gene-C9E95_RS03225;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=C9E95_RS03225;old_locus_tag=C9E95_03300 NZ_PYJW01000043.1 Protein Homology CDS 19039 19824 . + 0 ID=cds-WP_000004385.1;Parent=gene-C9E95_RS03225;Dbxref=GenBank:WP_000004385.1;Name=WP_000004385.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=C9E95_RS03225;product=crotonobetainyl-CoA hydratase;protein_id=WP_000004385.1;transl_table=11 NZ_PYJW01000043.1 RefSeq gene 19934 20530 . + . ID=gene-C9E95_RS03230;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=C9E95_RS03230;old_locus_tag=C9E95_03305 NZ_PYJW01000043.1 Protein Homology CDS 19934 20530 . + 0 ID=cds-WP_000122863.1;Parent=gene-C9E95_RS03230;Dbxref=GenBank:WP_000122863.1;Name=WP_000122863.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459074.1;locus_tag=C9E95_RS03230;product=carnitine operon protein CaiE;protein_id=WP_000122863.1;transl_table=11 NZ_PYJW01000043.1 RefSeq gene 20608 21003 . - . ID=gene-C9E95_RS03235;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=C9E95_RS03235;old_locus_tag=C9E95_03310 NZ_PYJW01000043.1 Protein Homology CDS 20608 21003 . - 0 ID=cds-WP_000333324.1;Parent=gene-C9E95_RS03235;Dbxref=GenBank:WP_000333324.1;Name=WP_000333324.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459073.1;locus_tag=C9E95_RS03235;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_000333324.1;transl_table=11 NZ_PYJW01000043.1 RefSeq gene 21277 24504 . - . ID=gene-C9E95_RS03240;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=C9E95_RS03240;old_locus_tag=C9E95_03315 NZ_PYJW01000043.1 Protein Homology CDS 21277 24504 . - 0 ID=cds-WP_001126310.1;Parent=gene-C9E95_RS03240;Dbxref=GenBank:WP_001126310.1;Name=WP_001126310.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=C9E95_RS03240;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_001126310.1;transl_table=11 NZ_PYJW01000043.1 RefSeq gene 24523 25671 . - . ID=gene-C9E95_RS03245;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=C9E95_RS03245;old_locus_tag=C9E95_03320 NZ_PYJW01000043.1 Protein Homology CDS 24523 25671 . - 0 ID=cds-WP_000597279.1;Parent=gene-C9E95_RS03245;Dbxref=GenBank:WP_000597279.1;Name=WP_000597279.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459071.1;locus_tag=C9E95_RS03245;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_000597279.1;transl_table=11 ##sequence-region NZ_PYJW01000073.1 1 24922 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000073.1 RefSeq region 1 24922 . + . ID=NZ_PYJW01000073.1:1..24922;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000073.1 RefSeq gene 213 1136 . - . ID=gene-C9E95_RS07250;Name=C9E95_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07250;old_locus_tag=C9E95_07420 NZ_PYJW01000073.1 Protein Homology CDS 213 1136 . - 0 ID=cds-WP_000540888.1;Parent=gene-C9E95_RS07250;Dbxref=GenBank:WP_000540888.1;Name=WP_000540888.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462047.1;locus_tag=C9E95_RS07250;product=polysaccharide deacetylase family protein;protein_id=WP_000540888.1;transl_table=11 NZ_PYJW01000073.1 RefSeq gene 1175 2053 . - . ID=gene-C9E95_RS07255;Name=C9E95_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07255;old_locus_tag=C9E95_07425 NZ_PYJW01000073.1 Protein Homology CDS 1175 2053 . - 0 ID=cds-WP_000089259.1;Parent=gene-C9E95_RS07255;Dbxref=GenBank:WP_000089259.1;Name=WP_000089259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462048.1;locus_tag=C9E95_RS07255;product=carbon-nitrogen hydrolase family protein;protein_id=WP_000089259.1;transl_table=11 NZ_PYJW01000073.1 RefSeq gene 2449 3753 . - . ID=gene-C9E95_RS07260;Name=C9E95_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07260;old_locus_tag=C9E95_07430 NZ_PYJW01000073.1 Protein Homology CDS 2449 3753 . - 0 ID=cds-WP_052934867.1;Parent=gene-C9E95_RS07260;Dbxref=GenBank:WP_052934867.1;Name=WP_052934867.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462049.1;locus_tag=C9E95_RS07260;product=MFS transporter;protein_id=WP_052934867.1;transl_table=11 NZ_PYJW01000073.1 RefSeq gene 4158 5342 . + . ID=gene-C9E95_RS07265;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=C9E95_RS07265;old_locus_tag=C9E95_07435 NZ_PYJW01000073.1 Protein Homology CDS 4158 5342 . + 0 ID=cds-WP_000815479.1;Parent=gene-C9E95_RS07265;Dbxref=GenBank:WP_000815479.1;Name=WP_000815479.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462050.1;locus_tag=C9E95_RS07265;product=mannonate dehydratase;protein_id=WP_000815479.1;transl_table=11 NZ_PYJW01000073.1 RefSeq gene 5453 6925 . + . ID=gene-C9E95_RS07270;Name=C9E95_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07270;old_locus_tag=C9E95_07440 NZ_PYJW01000073.1 Protein Homology CDS 5453 6925 . + 0 ID=cds-WP_000437132.1;Parent=gene-C9E95_RS07270;Dbxref=GenBank:WP_000437132.1;Name=WP_000437132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462051.1;locus_tag=C9E95_RS07270;product=fructuronate reductase;protein_id=WP_000437132.1;transl_table=11 NZ_PYJW01000073.1 RefSeq gene 6937 8349 . + . ID=gene-C9E95_RS07275;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=C9E95_RS07275;old_locus_tag=C9E95_07445 NZ_PYJW01000073.1 Protein Homology CDS 6937 8349 . + 0 ID=cds-WP_000190180.1;Parent=gene-C9E95_RS07275;Dbxref=GenBank:WP_000190180.1;Name=WP_000190180.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462052.1;locus_tag=C9E95_RS07275;product=glucuronate isomerase;protein_id=WP_000190180.1;transl_table=11 NZ_PYJW01000073.1 RefSeq gene 8649 9707 . - . ID=gene-C9E95_RS07280;Name=C9E95_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07280;old_locus_tag=C9E95_07450 NZ_PYJW01000073.1 Protein Homology CDS 8649 9707 . - 0 ID=cds-WP_000475246.1;Parent=gene-C9E95_RS07280;Dbxref=GenBank:WP_000475246.1;Name=WP_000475246.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA,zinc ion binding|0008270||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462053.1;locus_tag=C9E95_RS07280;product=methyl-accepting chemotaxis protein;protein_id=WP_000475246.1;transl_table=11 NZ_PYJW01000073.1 RefSeq gene 10377 12233 . - . ID=gene-C9E95_RS07290;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=C9E95_RS07290;old_locus_tag=C9E95_07460 NZ_PYJW01000073.1 Protein Homology CDS 10377 12233 . - 0 ID=cds-WP_000033690.1;Parent=gene-C9E95_RS07290;Dbxref=GenBank:WP_000033690.1;Name=WP_000033690.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462054.1;locus_tag=C9E95_RS07290;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_000033690.1;transl_table=11 NZ_PYJW01000073.1 RefSeq gene 12460 13326 . + . ID=gene-C9E95_RS07295;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=C9E95_RS07295;old_locus_tag=C9E95_07465 NZ_PYJW01000073.1 Protein Homology CDS 12460 13326 . + 0 ID=cds-WP_000774853.1;Parent=gene-C9E95_RS07295;Dbxref=GenBank:WP_000774853.1;Name=WP_000774853.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462055.1;locus_tag=C9E95_RS07295;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_000774853.1;transl_table=11 NZ_PYJW01000073.1 RefSeq gene 13394 14104 . - . ID=gene-C9E95_RS07300;Name=C9E95_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07300;old_locus_tag=C9E95_07470 NZ_PYJW01000073.1 Protein Homology CDS 13394 14104 . - 0 ID=cds-WP_001748656.1;Parent=gene-C9E95_RS07300;Dbxref=GenBank:WP_001748656.1;Name=WP_001748656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462056.1;locus_tag=C9E95_RS07300;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_001748656.1;transl_table=11 NZ_PYJW01000073.1 RefSeq gene 14104 15156 . - . ID=gene-C9E95_RS07305;Name=C9E95_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07305;old_locus_tag=C9E95_07475 NZ_PYJW01000073.1 Protein Homology CDS 14104 15156 . - 0 ID=cds-WP_080203949.1;Parent=gene-C9E95_RS07305;Dbxref=GenBank:WP_080203949.1;Name=WP_080203949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462057.1;locus_tag=C9E95_RS07305;product=ABC transporter substrate-binding protein;protein_id=WP_080203949.1;transl_table=11 NZ_PYJW01000073.1 RefSeq gene 15232 15480 . - . ID=gene-C9E95_RS07310;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=C9E95_RS07310;old_locus_tag=C9E95_07480 NZ_PYJW01000073.1 Protein Homology CDS 15232 15480 . - 0 ID=cds-WP_000334887.1;Parent=gene-C9E95_RS07310;Dbxref=GenBank:WP_000334887.1;Name=WP_000334887.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462058.1;locus_tag=C9E95_RS07310;product=hydrogenase maturation factor HybG;protein_id=WP_000334887.1;transl_table=11 NZ_PYJW01000073.1 RefSeq gene 15508 15849 . - . ID=gene-C9E95_RS07315;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=C9E95_RS07315;old_locus_tag=C9E95_07485 NZ_PYJW01000073.1 Protein Homology CDS 15508 15849 . - 0 ID=cds-WP_000544945.1;Parent=gene-C9E95_RS07315;Dbxref=GenBank:WP_000544945.1;Name=WP_000544945.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462059.1;locus_tag=C9E95_RS07315;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544945.1;transl_table=11 NZ_PYJW01000073.1 RefSeq gene 15842 16330 . - . ID=gene-C9E95_RS07320;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=C9E95_RS07320;old_locus_tag=C9E95_07490 NZ_PYJW01000073.1 Protein Homology CDS 15842 16330 . - 0 ID=cds-WP_023203800.1;Parent=gene-C9E95_RS07320;Dbxref=GenBank:WP_023203800.1;Name=WP_023203800.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462060.1;locus_tag=C9E95_RS07320;product=hydrogenase-2 assembly chaperone;protein_id=WP_023203800.1;transl_table=11 NZ_PYJW01000073.1 RefSeq gene 16323 16817 . - . ID=gene-C9E95_RS07325;Name=C9E95_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07325;old_locus_tag=C9E95_07495 NZ_PYJW01000073.1 Protein Homology CDS 16323 16817 . - 0 ID=cds-WP_001221960.1;Parent=gene-C9E95_RS07325;Dbxref=GenBank:WP_001221960.1;Name=WP_001221960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462061.1;locus_tag=C9E95_RS07325;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_001221960.1;transl_table=11 NZ_PYJW01000073.1 RefSeq gene 16817 18520 . - . ID=gene-C9E95_RS07330;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=C9E95_RS07330;old_locus_tag=C9E95_07500 NZ_PYJW01000073.1 Protein Homology CDS 16817 18520 . - 0 ID=cds-WP_000083045.1;Parent=gene-C9E95_RS07330;Dbxref=GenBank:WP_000083045.1;Name=WP_000083045.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462062.1;locus_tag=C9E95_RS07330;product=hydrogenase 2 large subunit;protein_id=WP_000083045.1;transl_table=11 NZ_PYJW01000073.1 RefSeq gene 18517 19695 . - . ID=gene-C9E95_RS07335;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=C9E95_RS07335;old_locus_tag=C9E95_07505 NZ_PYJW01000073.1 Protein Homology CDS 18517 19695 . - 0 ID=cds-WP_000017678.1;Parent=gene-C9E95_RS07335;Dbxref=GenBank:WP_000017678.1;Name=WP_000017678.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462063.1;locus_tag=C9E95_RS07335;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_000017678.1;transl_table=11 NZ_PYJW01000073.1 RefSeq gene 19685 20671 . - . ID=gene-C9E95_RS07340;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=C9E95_RS07340;old_locus_tag=C9E95_07510 NZ_PYJW01000073.1 Protein Homology CDS 19685 20671 . - 0 ID=cds-WP_001081721.1;Parent=gene-C9E95_RS07340;Dbxref=GenBank:WP_001081721.1;Name=WP_001081721.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462064.1;locus_tag=C9E95_RS07340;product=hydrogenase 2 operon protein HybA;protein_id=WP_001081721.1;transl_table=11 NZ_PYJW01000073.1 RefSeq gene 20674 21792 . - . ID=gene-C9E95_RS07345;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=C9E95_RS07345;old_locus_tag=C9E95_07515 NZ_PYJW01000073.1 Protein Homology CDS 20674 21792 . - 0 ID=cds-WP_000145429.1;Parent=gene-C9E95_RS07345;Dbxref=GenBank:WP_000145429.1;Name=WP_000145429.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462065.1;locus_tag=C9E95_RS07345;product=hydrogenase 2 small subunit;protein_id=WP_000145429.1;transl_table=11 NZ_PYJW01000073.1 RefSeq gene 21982 22269 . - . ID=gene-C9E95_RS07350;Name=C9E95_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07350;old_locus_tag=C9E95_07525 NZ_PYJW01000073.1 Protein Homology CDS 21982 22269 . - 0 ID=cds-WP_001059119.1;Parent=gene-C9E95_RS07350;Dbxref=GenBank:WP_001059119.1;Name=WP_001059119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462066.1;locus_tag=C9E95_RS07350;product=DUF2623 family protein;protein_id=WP_001059119.1;transl_table=11 NZ_PYJW01000073.1 RefSeq gene 22354 23997 . - . ID=gene-C9E95_RS07355;Name=C9E95_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07355;old_locus_tag=C9E95_07530 NZ_PYJW01000073.1 Protein Homology CDS 22354 23997 . - 0 ID=cds-WP_001238434.1;Parent=gene-C9E95_RS07355;Dbxref=GenBank:WP_001238434.1;Name=WP_001238434.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=C9E95_RS07355;product=methyl-accepting chemotaxis protein;protein_id=WP_001238434.1;transl_table=11 NZ_PYJW01000073.1 RefSeq gene 24304 24798 . - . ID=gene-C9E95_RS07360;Name=C9E95_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS07360;old_locus_tag=C9E95_07535 NZ_PYJW01000073.1 Protein Homology CDS 24304 24798 . - 0 ID=cds-WP_000439335.1;Parent=gene-C9E95_RS07360;Dbxref=GenBank:WP_000439335.1;Name=WP_000439335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462068.1;locus_tag=C9E95_RS07360;product=TIGR00645 family protein;protein_id=WP_000439335.1;transl_table=11 ##sequence-region NZ_PYJW01000078.1 1 24559 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000078.1 RefSeq region 1 24559 . + . ID=NZ_PYJW01000078.1:1..24559;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000078.1 RefSeq gene 302 2578 . + . ID=gene-C9E95_RS07975;Name=phsA;gbkey=Gene;gene=phsA;gene_biotype=protein_coding;locus_tag=C9E95_RS07975;old_locus_tag=C9E95_08155 NZ_PYJW01000078.1 Protein Homology CDS 302 2578 . + 0 ID=cds-WP_000028219.1;Parent=gene-C9E95_RS07975;Dbxref=GenBank:WP_000028219.1;Name=WP_000028219.1;Ontology_term=GO:0016491,GO:0043546,GO:0051539;gbkey=CDS;gene=phsA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461010.1;locus_tag=C9E95_RS07975;product=thiosulfate reductase PhsA;protein_id=WP_000028219.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 2593 3171 . + . ID=gene-C9E95_RS07980;Name=phsB;gbkey=Gene;gene=phsB;gene_biotype=protein_coding;locus_tag=C9E95_RS07980;old_locus_tag=C9E95_08160 NZ_PYJW01000078.1 Protein Homology CDS 2593 3171 . + 0 ID=cds-WP_001016236.1;Parent=gene-C9E95_RS07980;Dbxref=GenBank:WP_001016236.1;Name=WP_001016236.1;gbkey=CDS;gene=phsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461009.1;locus_tag=C9E95_RS07980;product=thiosulfate reductase electron transport protein PhsB;protein_id=WP_001016236.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 3168 3932 . + . ID=gene-C9E95_RS07985;Name=phsC;gbkey=Gene;gene=phsC;gene_biotype=protein_coding;locus_tag=C9E95_RS07985;old_locus_tag=C9E95_08165 NZ_PYJW01000078.1 Protein Homology CDS 3168 3932 . + 0 ID=cds-WP_001092553.1;Parent=gene-C9E95_RS07985;Dbxref=GenBank:WP_001092553.1;Name=WP_001092553.1;gbkey=CDS;gene=phsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461008.1;locus_tag=C9E95_RS07985;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_001092553.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 4056 5228 . + . ID=gene-C9E95_RS07990;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=C9E95_RS07990;old_locus_tag=C9E95_08170 NZ_PYJW01000078.1 Protein Homology CDS 4056 5228 . + 0 ID=cds-WP_023994315.1;Parent=gene-C9E95_RS07990;Dbxref=GenBank:WP_023994315.1;Name=WP_023994315.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=C9E95_RS07990;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_023994315.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 5379 5846 . + . ID=gene-C9E95_RS07995;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=C9E95_RS07995;old_locus_tag=C9E95_08175 NZ_PYJW01000078.1 Protein Homology CDS 5379 5846 . + 0 ID=cds-WP_000384326.1;Parent=gene-C9E95_RS07995;Dbxref=GenBank:WP_000384326.1;Name=WP_000384326.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461006.1;locus_tag=C9E95_RS07995;product=DNA gyrase inhibitor SbmC;protein_id=WP_000384326.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 5965 7023 . + . ID=gene-C9E95_RS08000;Name=C9E95_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08000;old_locus_tag=C9E95_08180 NZ_PYJW01000078.1 Protein Homology CDS 5965 7023 . + 0 ID=cds-WP_001200858.1;Parent=gene-C9E95_RS08000;Dbxref=GenBank:WP_001200858.1;Name=WP_001200858.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461005.1;locus_tag=C9E95_RS08000;product=FUSC family protein;protein_id=WP_001200858.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 7268 7603 . + . ID=gene-C9E95_RS08005;Name=C9E95_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08005;old_locus_tag=C9E95_08185 NZ_PYJW01000078.1 Protein Homology CDS 7268 7603 . + 0 ID=cds-WP_000450405.1;Parent=gene-C9E95_RS08005;Dbxref=GenBank:WP_000450405.1;Name=WP_000450405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461004.1;locus_tag=C9E95_RS08005;product=DUF496 family protein;protein_id=WP_000450405.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 7637 8503 . - . ID=gene-C9E95_RS08010;Name=pduX;gbkey=Gene;gene=pduX;gene_biotype=protein_coding;locus_tag=C9E95_RS08010;old_locus_tag=C9E95_08190 NZ_PYJW01000078.1 Protein Homology CDS 7637 8503 . - 0 ID=cds-WP_135369830.1;Parent=gene-C9E95_RS08010;Dbxref=GenBank:WP_135369830.1;Name=WP_135369830.1;gbkey=CDS;gene=pduX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632997.1;locus_tag=C9E95_RS08010;product=L-threonine kinase PduX;protein_id=WP_135369830.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 8597 9811 . - . ID=gene-C9E95_RS08015;Name=pduW;gbkey=Gene;gene=pduW;gene_biotype=protein_coding;locus_tag=C9E95_RS08015;old_locus_tag=C9E95_08195 NZ_PYJW01000078.1 Protein Homology CDS 8597 9811 . - 0 ID=cds-WP_000120647.1;Parent=gene-C9E95_RS08015;Dbxref=GenBank:WP_000120647.1;Name=WP_000120647.1;gbkey=CDS;gene=pduW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=C9E95_RS08015;product=propanediol utilization propionate kinase PduW;protein_id=WP_000120647.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 9796 10248 . - . ID=gene-C9E95_RS08020;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=C9E95_RS08020;old_locus_tag=C9E95_08200 NZ_PYJW01000078.1 Protein Homology CDS 9796 10248 . - 0 ID=cds-WP_000826277.1;Parent=gene-C9E95_RS08020;Dbxref=GenBank:WP_000826277.1;Name=WP_000826277.1;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461001.1;locus_tag=C9E95_RS08020;product=propanediol utilization protein PduV;protein_id=WP_000826277.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 10253 10603 . - . ID=gene-C9E95_RS08025;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=C9E95_RS08025;old_locus_tag=C9E95_08205 NZ_PYJW01000078.1 Protein Homology CDS 10253 10603 . - 0 ID=cds-WP_000441103.1;Parent=gene-C9E95_RS08025;Dbxref=GenBank:WP_000441103.1;Name=WP_000441103.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461000.1;locus_tag=C9E95_RS08025;product=propanediol utilization microcompartment protein PduU;protein_id=WP_000441103.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 10603 11157 . - . ID=gene-C9E95_RS08030;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=C9E95_RS08030;old_locus_tag=C9E95_08210 NZ_PYJW01000078.1 Protein Homology CDS 10603 11157 . - 0 ID=cds-WP_000075772.1;Parent=gene-C9E95_RS08030;Dbxref=GenBank:WP_000075772.1;Name=WP_000075772.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=C9E95_RS08030;product=propanediol utilization microcompartment protein PduT;protein_id=WP_000075772.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 11160 12515 . - . ID=gene-C9E95_RS08035;Name=pduS;gbkey=Gene;gene=pduS;gene_biotype=protein_coding;locus_tag=C9E95_RS08035;old_locus_tag=C9E95_08215 NZ_PYJW01000078.1 Protein Homology CDS 11160 12515 . - 0 ID=cds-WP_080203693.1;Parent=gene-C9E95_RS08035;Dbxref=GenBank:WP_080203693.1;Name=WP_080203693.1;gbkey=CDS;gene=pduS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=C9E95_RS08035;product=cobalamin reductase PduS;protein_id=WP_080203693.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 12512 13624 . - . ID=gene-C9E95_RS08040;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=C9E95_RS08040;old_locus_tag=C9E95_08220 NZ_PYJW01000078.1 Protein Homology CDS 12512 13624 . - 0 ID=cds-WP_023202804.1;Parent=gene-C9E95_RS08040;Dbxref=GenBank:WP_023202804.1;Name=WP_023202804.1;gbkey=CDS;gene=pduQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460997.1;locus_tag=C9E95_RS08040;product=1-propanol dehydrogenase PduQ;protein_id=WP_023202804.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 13636 15030 . - . ID=gene-C9E95_RS08045;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=C9E95_RS08045;old_locus_tag=C9E95_08225 NZ_PYJW01000078.1 Protein Homology CDS 13636 15030 . - 0 ID=cds-WP_080203692.1;Parent=gene-C9E95_RS08045;Dbxref=GenBank:WP_080203692.1;Name=WP_080203692.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460996.1;locus_tag=C9E95_RS08045;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=WP_080203692.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 15027 16037 . - . ID=gene-C9E95_RS08050;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=protein_coding;locus_tag=C9E95_RS08050;old_locus_tag=C9E95_08230 NZ_PYJW01000078.1 Protein Homology CDS 15027 16037 . - 0 ID=cds-WP_001808095.1;Parent=gene-C9E95_RS08050;Dbxref=GenBank:WP_001808095.1;Name=WP_001808095.1;gbkey=CDS;gene=pduO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460995.1;locus_tag=C9E95_RS08050;product=two-domain cob(I)yrinic acid a%2Cc-diamide adenosyltransferase PduO;protein_id=WP_001808095.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 16047 16322 . - . ID=gene-C9E95_RS08055;Name=pduN;gbkey=Gene;gene=pduN;gene_biotype=protein_coding;locus_tag=C9E95_RS08055;old_locus_tag=C9E95_08235 NZ_PYJW01000078.1 Protein Homology CDS 16047 16322 . - 0 ID=cds-WP_000549825.1;Parent=gene-C9E95_RS08055;Dbxref=GenBank:WP_000549825.1;Name=WP_000549825.1;gbkey=CDS;gene=pduN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228577.1;locus_tag=C9E95_RS08055;product=propanediol utilization microcompartment protein PduN;protein_id=WP_000549825.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 16326 16817 . - . ID=gene-C9E95_RS08060;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=C9E95_RS08060;old_locus_tag=C9E95_08240 NZ_PYJW01000078.1 Protein Homology CDS 16326 16817 . - 0 ID=cds-WP_080203690.1;Parent=gene-C9E95_RS08060;Dbxref=GenBank:WP_080203690.1;Name=WP_080203690.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460993.1;locus_tag=C9E95_RS08060;product=propanediol utilization microcompartment protein PduM;protein_id=WP_080203690.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 16814 17446 . - . ID=gene-C9E95_RS08065;Name=C9E95_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08065;old_locus_tag=C9E95_08245 NZ_PYJW01000078.1 Protein Homology CDS 16814 17446 . - 0 ID=cds-WP_079971467.1;Parent=gene-C9E95_RS08065;Dbxref=GenBank:WP_079971467.1;Name=WP_079971467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460992.1;locus_tag=C9E95_RS08065;product=phosphate propanoyltransferase;protein_id=WP_079971467.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 17446 17928 . - . ID=gene-C9E95_RS08070;Name=pduK;gbkey=Gene;gene=pduK;gene_biotype=protein_coding;locus_tag=C9E95_RS08070;old_locus_tag=C9E95_08250 NZ_PYJW01000078.1 Protein Homology CDS 17446 17928 . - 0 ID=cds-WP_080203689.1;Parent=gene-C9E95_RS08070;Dbxref=GenBank:WP_080203689.1;Name=WP_080203689.1;gbkey=CDS;gene=pduK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460991.3;locus_tag=C9E95_RS08070;product=propanediol utilization microcompartment protein PduK;protein_id=WP_080203689.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 17932 18207 . - . ID=gene-C9E95_RS08075;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=C9E95_RS08075;old_locus_tag=C9E95_08255 NZ_PYJW01000078.1 Protein Homology CDS 17932 18207 . - 0 ID=cds-WP_001057755.1;Parent=gene-C9E95_RS08075;Dbxref=GenBank:WP_001057755.1;Name=WP_001057755.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460990.1;locus_tag=C9E95_RS08075;product=propanediol utilization microcompartment protein PduJ;protein_id=WP_001057755.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 18226 18576 . - . ID=gene-C9E95_RS08080;Name=pduH;gbkey=Gene;gene=pduH;gene_biotype=protein_coding;locus_tag=C9E95_RS08080;old_locus_tag=C9E95_08260 NZ_PYJW01000078.1 Protein Homology CDS 18226 18576 . - 0 ID=cds-WP_000377969.1;Parent=gene-C9E95_RS08080;Dbxref=GenBank:WP_000377969.1;Name=WP_000377969.1;gbkey=CDS;gene=pduH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460989.1;locus_tag=C9E95_RS08080;product=propanediol dehydratase reactivase beta subunit PduH;protein_id=WP_000377969.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 18566 20398 . - . ID=gene-C9E95_RS08085;Name=pduG;gbkey=Gene;gene=pduG;gene_biotype=protein_coding;locus_tag=C9E95_RS08085;old_locus_tag=C9E95_08265 NZ_PYJW01000078.1 Protein Homology CDS 18566 20398 . - 0 ID=cds-WP_023213493.1;Parent=gene-C9E95_RS08085;Dbxref=GenBank:WP_023213493.1;Name=WP_023213493.1;gbkey=CDS;gene=pduG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=C9E95_RS08085;product=propanediol dehydratase reactivase alpha subunit PduG;protein_id=WP_023213493.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 20414 20935 . - . ID=gene-C9E95_RS08090;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=C9E95_RS08090;old_locus_tag=C9E95_08270 NZ_PYJW01000078.1 Protein Homology CDS 20414 20935 . - 0 ID=cds-WP_001090600.1;Parent=gene-C9E95_RS08090;Dbxref=GenBank:WP_001090600.1;Name=WP_001090600.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460987.1;locus_tag=C9E95_RS08090;product=propanediol dehydratase small subunit PduE;protein_id=WP_001090600.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 20950 21624 . - . ID=gene-C9E95_RS08095;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=C9E95_RS08095;old_locus_tag=C9E95_08275 NZ_PYJW01000078.1 Protein Homology CDS 20950 21624 . - 0 ID=cds-WP_000405048.1;Parent=gene-C9E95_RS08095;Dbxref=GenBank:WP_000405048.1;Name=WP_000405048.1;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460986.1;locus_tag=C9E95_RS08095;product=propanediol dehydratase medium subunit PduD;protein_id=WP_000405048.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 21635 23299 . - . ID=gene-C9E95_RS08100;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=C9E95_RS08100;old_locus_tag=C9E95_08280 NZ_PYJW01000078.1 Protein Homology CDS 21635 23299 . - 0 ID=cds-WP_001256896.1;Parent=gene-C9E95_RS08100;Dbxref=GenBank:WP_001256896.1;Name=WP_001256896.1;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460985.1;locus_tag=C9E95_RS08100;product=propanediol dehydratase large subunit PduC;protein_id=WP_001256896.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 23318 24130 . - . ID=gene-C9E95_RS08105;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=C9E95_RS08105;old_locus_tag=C9E95_08285 NZ_PYJW01000078.1 Protein Homology CDS 23318 24130 . - 0 ID=cds-WP_000097500.1;Parent=gene-C9E95_RS08105;Dbxref=GenBank:WP_000097500.1;Name=WP_000097500.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=pduB;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228567.1;locus_tag=C9E95_RS08105;product=propanediol utilization microcompartment protein PduB;protein_id=WP_000097500.1;transl_table=11 NZ_PYJW01000078.1 RefSeq gene 24127 24411 . - . ID=gene-C9E95_RS08110;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=C9E95_RS08110;old_locus_tag=C9E95_08290 NZ_PYJW01000078.1 Protein Homology CDS 24127 24411 . - 0 ID=cds-WP_001183618.1;Parent=gene-C9E95_RS08110;Dbxref=GenBank:WP_001183618.1;Name=WP_001183618.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460983.1;locus_tag=C9E95_RS08110;product=propanediol utilization microcompartment protein PduA;protein_id=WP_001183618.1;transl_table=11 ##sequence-region NZ_PYJW01000114.1 1 24395 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000114.1 RefSeq region 1 24395 . + . ID=NZ_PYJW01000114.1:1..24395;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000114.1 RefSeq gene 28 792 . + . ID=gene-C9E95_RS11950;Name=C9E95_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11950;old_locus_tag=C9E95_12260 NZ_PYJW01000114.1 Protein Homology CDS 28 792 . + 0 ID=cds-WP_000052612.1;Parent=gene-C9E95_RS11950;Dbxref=GenBank:WP_000052612.1;Name=WP_000052612.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052612.1;locus_tag=C9E95_RS11950;product=outer membrane protein OmpK;protein_id=WP_000052612.1;transl_table=11 NZ_PYJW01000114.1 RefSeq gene 813 2306 . + . ID=gene-C9E95_RS11955;Name=C9E95_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11955;old_locus_tag=C9E95_12265 NZ_PYJW01000114.1 Protein Homology CDS 813 2306 . + 0 ID=cds-WP_064044098.1;Parent=gene-C9E95_RS11955;Dbxref=GenBank:WP_064044098.1;Name=WP_064044098.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459040.1;locus_tag=C9E95_RS11955;product=sulfatase family protein;protein_id=WP_064044098.1;transl_table=11 NZ_PYJW01000114.1 RefSeq gene 2410 3606 . + . ID=gene-C9E95_RS11960;Name=C9E95_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11960;old_locus_tag=C9E95_12270 NZ_PYJW01000114.1 Protein Homology CDS 2410 3606 . + 0 ID=cds-WP_080203734.1;Parent=gene-C9E95_RS11960;Dbxref=GenBank:WP_080203734.1;Name=WP_080203734.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519625.1;locus_tag=C9E95_RS11960;product=anaerobic sulfatase maturase;protein_id=WP_080203734.1;transl_table=11 NZ_PYJW01000114.1 RefSeq gene 3624 4877 . + . ID=gene-C9E95_RS11965;Name=C9E95_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11965;old_locus_tag=C9E95_12275 NZ_PYJW01000114.1 Protein Homology CDS 3624 4877 . + 0 ID=cds-WP_000457885.1;Parent=gene-C9E95_RS11965;Dbxref=GenBank:WP_000457885.1;Name=WP_000457885.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457886.1;locus_tag=C9E95_RS11965;product=IS1/IS1595 family N-terminal zinc-binding domain-containing protein;protein_id=WP_000457885.1;transl_table=11 NZ_PYJW01000114.1 RefSeq gene 4996 5253 . + . ID=gene-C9E95_RS11970;Name=C9E95_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11970;old_locus_tag=C9E95_12280 NZ_PYJW01000114.1 Protein Homology CDS 4996 5253 . + 0 ID=cds-WP_023993820.1;Parent=gene-C9E95_RS11970;Dbxref=GenBank:WP_023993820.1;Name=WP_023993820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528979.1;locus_tag=C9E95_RS11970;product=hypothetical protein;protein_id=WP_023993820.1;transl_table=11 NZ_PYJW01000114.1 RefSeq pseudogene 5175 5402 . + . ID=gene-C9E95_RS11975;Name=C9E95_RS11975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS11975;old_locus_tag=C9E95_12285;partial=true;pseudo=true;start_range=.,5175 NZ_PYJW01000114.1 Protein Homology CDS 5175 5402 . + 0 ID=cds-C9E95_RS11975;Parent=gene-C9E95_RS11975;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459043.1;locus_tag=C9E95_RS11975;partial=true;product=aryl-sulfate sulfotransferase;pseudo=true;start_range=.,5175;transl_table=11 NZ_PYJW01000114.1 RefSeq gene 5565 6731 . + . ID=gene-C9E95_RS11980;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=C9E95_RS11980;old_locus_tag=C9E95_12290 NZ_PYJW01000114.1 Protein Homology CDS 5565 6731 . + 0 ID=cds-WP_023993819.1;Parent=gene-C9E95_RS11980;Dbxref=GenBank:WP_023993819.1;Name=WP_023993819.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459044.1;locus_tag=C9E95_RS11980;product=Na+/H+ antiporter NhaA;protein_id=WP_023993819.1;transl_table=11 NZ_PYJW01000114.1 RefSeq gene 6793 7692 . + . ID=gene-C9E95_RS11985;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=C9E95_RS11985;old_locus_tag=C9E95_12295 NZ_PYJW01000114.1 Protein Homology CDS 6793 7692 . + 0 ID=cds-WP_000062872.1;Parent=gene-C9E95_RS11985;Dbxref=GenBank:WP_000062872.1;Name=WP_000062872.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459045.1;locus_tag=C9E95_RS11985;product=transcriptional activator NhaR;protein_id=WP_000062872.1;transl_table=11 NZ_PYJW01000114.1 RefSeq gene 7747 9786 . - . ID=gene-C9E95_RS11990;Name=C9E95_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11990;old_locus_tag=C9E95_12300 NZ_PYJW01000114.1 Protein Homology CDS 7747 9786 . - 0 ID=cds-WP_023993818.1;Parent=gene-C9E95_RS11990;Dbxref=GenBank:WP_023993818.1;Name=WP_023993818.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459046.1;locus_tag=C9E95_RS11990;product=glycoside hydrolase family 31 protein;protein_id=WP_023993818.1;transl_table=11 NZ_PYJW01000114.1 RefSeq gene 9826 11199 . - . ID=gene-C9E95_RS11995;Name=C9E95_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11995;old_locus_tag=C9E95_12305 NZ_PYJW01000114.1 Protein Homology CDS 9826 11199 . - 0 ID=cds-WP_000099989.1;Parent=gene-C9E95_RS11995;Dbxref=GenBank:WP_000099989.1;Name=WP_000099989.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459047.1;locus_tag=C9E95_RS11995;product=MFS transporter;protein_id=WP_000099989.1;transl_table=11 NZ_PYJW01000114.1 RefSeq gene 11655 11918 . - . ID=gene-C9E95_RS12000;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=C9E95_RS12000;old_locus_tag=C9E95_12310 NZ_PYJW01000114.1 Protein Homology CDS 11655 11918 . - 0 ID=cds-WP_001518655.1;Parent=gene-C9E95_RS12000;Dbxref=GenBank:WP_001518655.1;Name=WP_001518655.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=C9E95_RS12000;product=30S ribosomal protein S20;protein_id=WP_001518655.1;transl_table=11 NZ_PYJW01000114.1 RefSeq gene 12024 12239 . + . ID=gene-C9E95_RS12005;Name=C9E95_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12005;old_locus_tag=C9E95_12315 NZ_PYJW01000114.1 Protein Homology CDS 12024 12239 . + 0 ID=cds-WP_001726890.1;Parent=gene-C9E95_RS12005;Dbxref=GenBank:WP_001726890.1;Name=WP_001726890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459049.1;locus_tag=C9E95_RS12005;product=DUF2575 family protein;protein_id=WP_001726890.1;transl_table=11 NZ_PYJW01000114.1 RefSeq gene 12247 13185 . + . ID=gene-C9E95_RS12010;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=C9E95_RS12010;old_locus_tag=C9E95_12320 NZ_PYJW01000114.1 Protein Homology CDS 12247 13185 . + 0 ID=cds-WP_000767311.1;Parent=gene-C9E95_RS12010;Dbxref=GenBank:WP_000767311.1;Name=WP_000767311.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459050.1;locus_tag=C9E95_RS12010;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000767311.1;transl_table=11 NZ_PYJW01000114.1 RefSeq gene 13230 16064 . + . ID=gene-C9E95_RS12015;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=C9E95_RS12015;old_locus_tag=C9E95_12325 NZ_PYJW01000114.1 Protein Homology CDS 13230 16064 . + 0 ID=cds-WP_001670710.1;Parent=gene-C9E95_RS12015;Dbxref=GenBank:WP_001670710.1;Name=WP_001670710.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459051.1;locus_tag=C9E95_RS12015;product=isoleucine--tRNA ligase;protein_id=WP_001670710.1;transl_table=11 NZ_PYJW01000114.1 RefSeq gene 16064 16564 . + . ID=gene-C9E95_RS12020;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=C9E95_RS12020;old_locus_tag=C9E95_12330 NZ_PYJW01000114.1 Protein Homology CDS 16064 16564 . + 0 ID=cds-WP_000042736.1;Parent=gene-C9E95_RS12020;Dbxref=GenBank:WP_000042736.1;Name=WP_000042736.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459052.1;locus_tag=C9E95_RS12020;product=signal peptidase II;protein_id=WP_000042736.1;transl_table=11 NZ_PYJW01000114.1 RefSeq gene 16719 17168 . + . ID=gene-C9E95_RS12025;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=C9E95_RS12025;old_locus_tag=C9E95_12335 NZ_PYJW01000114.1 Protein Homology CDS 16719 17168 . + 0 ID=cds-WP_000047269.1;Parent=gene-C9E95_RS12025;Dbxref=GenBank:WP_000047269.1;Name=WP_000047269.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459053.1;locus_tag=C9E95_RS12025;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000047269.1;transl_table=11 NZ_PYJW01000114.1 RefSeq gene 17171 18121 . + . ID=gene-C9E95_RS12030;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=C9E95_RS12030;old_locus_tag=C9E95_12340 NZ_PYJW01000114.1 Protein Homology CDS 17171 18121 . + 0 ID=cds-WP_001166422.1;Parent=gene-C9E95_RS12030;Dbxref=GenBank:WP_001166422.1;Name=WP_001166422.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=C9E95_RS12030;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166422.1;transl_table=11 NZ_PYJW01000114.1 RefSeq gene 18321 19523 . + . ID=gene-C9E95_RS12035;Name=C9E95_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12035;old_locus_tag=C9E95_12345 NZ_PYJW01000114.1 Protein Homology CDS 18321 19523 . + 0 ID=cds-WP_000516322.1;Parent=gene-C9E95_RS12035;Dbxref=GenBank:WP_000516322.1;Name=WP_000516322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459055.1;locus_tag=C9E95_RS12035;product=XAC2610-related protein;protein_id=WP_000516322.1;transl_table=11 NZ_PYJW01000114.1 RefSeq gene 19539 20459 . + . ID=gene-C9E95_RS12040;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=C9E95_RS12040;old_locus_tag=C9E95_12350 NZ_PYJW01000114.1 Protein Homology CDS 19539 20459 . + 0 ID=cds-WP_000127279.1;Parent=gene-C9E95_RS12040;Dbxref=GenBank:WP_000127279.1;Name=WP_000127279.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459056.1;locus_tag=C9E95_RS12040;product=ribonucleoside hydrolase RihC;protein_id=WP_000127279.1;transl_table=11 NZ_PYJW01000114.1 RefSeq gene 20481 21167 . - . ID=gene-C9E95_RS12045;Name=citB;gbkey=Gene;gene=citB;gene_biotype=protein_coding;locus_tag=C9E95_RS12045;old_locus_tag=C9E95_12355 NZ_PYJW01000114.1 Protein Homology CDS 20481 21167 . - 0 ID=cds-WP_000377411.1;Parent=gene-C9E95_RS12045;Dbxref=GenBank:WP_000377411.1;Name=WP_000377411.1;gbkey=CDS;gene=citB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459057.1;locus_tag=C9E95_RS12045;product=citrate response regulator transcription factor CitB;protein_id=WP_000377411.1;transl_table=11 NZ_PYJW01000114.1 RefSeq gene 21169 22788 . - . ID=gene-C9E95_RS12050;Name=citA;gbkey=Gene;gene=citA;gene_biotype=protein_coding;locus_tag=C9E95_RS12050;old_locus_tag=C9E95_12360 NZ_PYJW01000114.1 Protein Homology CDS 21169 22788 . - 0 ID=cds-WP_023194337.1;Parent=gene-C9E95_RS12050;Dbxref=GenBank:WP_023194337.1;Name=WP_023194337.1;gbkey=CDS;gene=citA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459058.1;locus_tag=C9E95_RS12050;product=citrate sensor histidine kinase CitA;protein_id=WP_023194337.1;transl_table=11 NZ_PYJW01000114.1 RefSeq gene 22923 24224 . - . ID=gene-C9E95_RS12055;Name=C9E95_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS12055;old_locus_tag=C9E95_12365 NZ_PYJW01000114.1 Protein Homology CDS 22923 24224 . - 0 ID=cds-WP_135369844.1;Parent=gene-C9E95_RS12055;Dbxref=GenBank:WP_135369844.1;Name=WP_135369844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=C9E95_RS12055;product=oxalacetate decarboxylase subunit beta;protein_id=WP_135369844.1;transl_table=11 NZ_PYJW01000114.1 RefSeq gene 24237 24395 . - . ID=gene-C9E95_RS23620;Name=C9E95_RS23620;end_range=24395,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23620;old_locus_tag=C9E95_12370;partial=true NZ_PYJW01000114.1 Protein Homology CDS 24237 24395 . - 0 ID=cds-WP_072268948.1;Parent=gene-C9E95_RS23620;Dbxref=GenBank:WP_072268948.1;Name=WP_072268948.1;end_range=24395,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9E95_RS23620;partial=true;product=biotin/lipoyl-containing protein;protein_id=WP_072268948.1;transl_table=11 ##sequence-region NZ_PYJW01000009.1 1 497 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000009.1 RefSeq region 1 497 . + . ID=NZ_PYJW01000009.1:1..497;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000009.1 RefSeq gene 1 497 . - . ID=gene-C9E95_RS23345;Name=C9E95_RS23345;end_range=497,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23345;partial=true;start_range=.,1 NZ_PYJW01000009.1 Protein Homology CDS 1 497 . - 2 ID=cds-WP_245306706.1;Parent=gene-C9E95_RS23345;Dbxref=GenBank:WP_245306706.1;Name=WP_245306706.1;end_range=497,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001529574.1;locus_tag=C9E95_RS23345;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_245306706.1;start_range=.,1;transl_table=11 ##sequence-region NZ_PYJW01000040.1 1 23704 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000040.1 RefSeq region 1 23704 . + . ID=NZ_PYJW01000040.1:1..23704;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000040.1 RefSeq gene 37 282 . + . ID=gene-C9E95_RS02830;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=C9E95_RS02830;old_locus_tag=C9E95_02875 NZ_PYJW01000040.1 Protein Homology CDS 37 282 . + 0 ID=cds-WP_001217763.1;Parent=gene-C9E95_RS02830;Dbxref=GenBank:WP_001217763.1;Name=WP_001217763.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460133.1;locus_tag=C9E95_RS02830;product=DNA damage-inducible protein I;protein_id=WP_001217763.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 572 826 . + . ID=gene-C9E95_RS02835;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=C9E95_RS02835;old_locus_tag=C9E95_02880 NZ_PYJW01000040.1 Protein Homology CDS 572 826 . + 0 ID=cds-WP_000414441.1;Parent=gene-C9E95_RS02835;Dbxref=GenBank:WP_000414441.1;Name=WP_000414441.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460132.3;locus_tag=C9E95_RS02835;product=biofilm formation regulator BssS;protein_id=WP_000414441.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 939 2057 . + . ID=gene-C9E95_RS02840;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=C9E95_RS02840;old_locus_tag=C9E95_02885 NZ_PYJW01000040.1 Protein Homology CDS 939 2057 . + 0 ID=cds-WP_080203880.1;Parent=gene-C9E95_RS02840;Dbxref=GenBank:WP_080203880.1;Name=WP_080203880.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460131.1;locus_tag=C9E95_RS02840;product=N-methyl-L-tryptophan oxidase;protein_id=WP_080203880.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 2098 2211 . + . ID=gene-C9E95_RS02845;Name=C9E95_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02845;old_locus_tag=C9E95_02890 NZ_PYJW01000040.1 Protein Homology CDS 2098 2211 . + 0 ID=cds-WP_001253282.1;Parent=gene-C9E95_RS02845;Dbxref=GenBank:WP_001253282.1;Name=WP_001253282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460130.1;locus_tag=C9E95_RS02845;product=YceO family protein;protein_id=WP_001253282.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 2474 3046 . + . ID=gene-C9E95_RS02850;Name=C9E95_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02850;old_locus_tag=C9E95_02895 NZ_PYJW01000040.1 Protein Homology CDS 2474 3046 . + 0 ID=cds-WP_001159776.1;Parent=gene-C9E95_RS02850;Dbxref=GenBank:WP_001159776.1;Name=WP_001159776.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460129.1;locus_tag=C9E95_RS02850;product=cytochrome b;protein_id=WP_001159776.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 3043 3618 . + . ID=gene-C9E95_RS02855;Name=C9E95_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02855;old_locus_tag=C9E95_02900 NZ_PYJW01000040.1 Protein Homology CDS 3043 3618 . + 0 ID=cds-WP_000739886.1;Parent=gene-C9E95_RS02855;Dbxref=GenBank:WP_000739886.1;Name=WP_000739886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460128.1;locus_tag=C9E95_RS02855;product=YceI family protein;protein_id=WP_000739886.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 3670 4722 . - . ID=gene-C9E95_RS02860;Name=C9E95_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02860;old_locus_tag=C9E95_02905 NZ_PYJW01000040.1 Protein Homology CDS 3670 4722 . - 0 ID=cds-WP_001748342.1;Parent=gene-C9E95_RS02860;Dbxref=GenBank:WP_001748342.1;Name=WP_001748342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460127.1;locus_tag=C9E95_RS02860;product=rhodanese-related sulfurtransferase;protein_id=WP_001748342.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 4942 5862 . + . ID=gene-C9E95_RS02865;Name=C9E95_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02865;old_locus_tag=C9E95_02910 NZ_PYJW01000040.1 Protein Homology CDS 4942 5862 . + 0 ID=cds-WP_000163977.1;Parent=gene-C9E95_RS02865;Dbxref=GenBank:WP_000163977.1;Name=WP_000163977.1;Ontology_term=GO:0036104,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460126.1;locus_tag=C9E95_RS02865;product=Kdo(2)-lipid IV(A) acyltransferase;protein_id=WP_000163977.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 6017 7231 . + . ID=gene-C9E95_RS02870;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=C9E95_RS02870;old_locus_tag=C9E95_02920 NZ_PYJW01000040.1 Protein Homology CDS 6017 7231 . + 0 ID=cds-WP_000075053.1;Parent=gene-C9E95_RS02870;Dbxref=GenBank:WP_000075053.1;Name=WP_000075053.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460125.1;locus_tag=C9E95_RS02870;product=multidrug efflux MFS transporter MdtG;protein_id=WP_000075053.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 7313 7687 . + . ID=gene-C9E95_RS02875;Name=C9E95_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02875;old_locus_tag=C9E95_02925 NZ_PYJW01000040.1 Protein Homology CDS 7313 7687 . + 0 ID=cds-WP_000180050.1;Parent=gene-C9E95_RS02875;Dbxref=GenBank:WP_000180050.1;Name=WP_000180050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460124.1;locus_tag=C9E95_RS02875;product=MysB family protein;protein_id=WP_000180050.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 7688 7915 . - . ID=gene-C9E95_RS02880;Name=C9E95_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02880;old_locus_tag=C9E95_02930 NZ_PYJW01000040.1 Protein Homology CDS 7688 7915 . - 0 ID=cds-WP_001217832.1;Parent=gene-C9E95_RS02880;Dbxref=GenBank:WP_001217832.1;Name=WP_001217832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460123.1;locus_tag=C9E95_RS02880;product=YceK/YidQ family lipoprotein;protein_id=WP_001217832.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 7989 10532 . - . ID=gene-C9E95_RS02885;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=C9E95_RS02885;old_locus_tag=C9E95_02935 NZ_PYJW01000040.1 Protein Homology CDS 7989 10532 . - 0 ID=cds-WP_001044607.1;Parent=gene-C9E95_RS02885;Dbxref=GenBank:WP_001044607.1;Name=WP_001044607.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044602.1;locus_tag=C9E95_RS02885;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_001044607.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 10525 12060 . - . ID=gene-C9E95_RS02890;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=C9E95_RS02890;old_locus_tag=C9E95_02940 NZ_PYJW01000040.1 Protein Homology CDS 10525 12060 . - 0 ID=cds-WP_001562609.1;Parent=gene-C9E95_RS02890;Dbxref=GenBank:WP_001562609.1;Name=WP_001562609.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460121.1;locus_tag=C9E95_RS02890;product=glucans biosynthesis protein MdoG;protein_id=WP_001562609.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 12332 13486 . + . ID=gene-C9E95_RS02900;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=C9E95_RS02900;old_locus_tag=C9E95_02945 NZ_PYJW01000040.1 Protein Homology CDS 12332 13486 . + 0 ID=cds-WP_000100066.1;Parent=gene-C9E95_RS02900;Dbxref=GenBank:WP_000100066.1;Name=WP_000100066.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460120.1;locus_tag=C9E95_RS02900;product=glucans biosynthesis protein MdoC;protein_id=WP_000100066.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 13503 14990 . - . ID=gene-C9E95_RS02905;Name=C9E95_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02905;old_locus_tag=C9E95_02950 NZ_PYJW01000040.1 Protein Homology CDS 13503 14990 . - 0 ID=cds-WP_000976323.1;Parent=gene-C9E95_RS02905;Dbxref=GenBank:WP_000976323.1;Name=WP_000976323.1;Ontology_term=GO:0032049,GO:0090483;gbkey=CDS;go_function=phosphatidylglycerol-phosphatidylethanolamine phosphatidyltransferase activity|0090483||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=C9E95_RS02905;product=phospholipase D family protein;protein_id=WP_000976323.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 14926 15465 . - . ID=gene-C9E95_RS02910;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=C9E95_RS02910;old_locus_tag=C9E95_02955 NZ_PYJW01000040.1 Protein Homology CDS 14926 15465 . - 0 ID=cds-WP_000203941.1;Parent=gene-C9E95_RS02910;Dbxref=GenBank:WP_000203941.1;Name=WP_000203941.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460118.1;locus_tag=C9E95_RS02910;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_000203941.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 15555 15875 . - . ID=gene-C9E95_RS02915;Name=C9E95_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02915;old_locus_tag=C9E95_02960 NZ_PYJW01000040.1 Protein Homology CDS 15555 15875 . - 0 ID=cds-WP_023993495.1;Parent=gene-C9E95_RS02915;Dbxref=GenBank:WP_023993495.1;Name=WP_023993495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460117.1;locus_tag=C9E95_RS02915;product=type 1 fimbrial protein;protein_id=WP_023993495.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 16006 16332 . - . ID=gene-C9E95_RS02920;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=C9E95_RS02920;old_locus_tag=C9E95_02965 NZ_PYJW01000040.1 Protein Homology CDS 16006 16332 . - 0 ID=cds-WP_000557256.1;Parent=gene-C9E95_RS02920;Dbxref=GenBank:WP_000557256.1;Name=WP_000557256.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460116.1;locus_tag=C9E95_RS02920;product=curli assembly chaperone CsgC;protein_id=WP_000557256.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 16394 16849 . - . ID=gene-C9E95_RS02925;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=C9E95_RS02925;old_locus_tag=C9E95_02970 NZ_PYJW01000040.1 Protein Homology CDS 16394 16849 . - 0 ID=cds-WP_000771416.1;Parent=gene-C9E95_RS02925;Dbxref=GenBank:WP_000771416.1;Name=WP_000771416.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460115.1;locus_tag=C9E95_RS02925;product=curli major subunit CsgA;protein_id=WP_000771416.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 16891 17346 . - . ID=gene-C9E95_RS02930;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=C9E95_RS02930;old_locus_tag=C9E95_02975 NZ_PYJW01000040.1 Protein Homology CDS 16891 17346 . - 0 ID=cds-WP_000791655.1;Parent=gene-C9E95_RS02930;Dbxref=GenBank:WP_000791655.1;Name=WP_000791655.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460114.1;locus_tag=C9E95_RS02930;product=curli minor subunit CsgB;protein_id=WP_000791655.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 18101 18751 . + . ID=gene-C9E95_RS02935;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=C9E95_RS02935;old_locus_tag=C9E95_02985 NZ_PYJW01000040.1 Protein Homology CDS 18101 18751 . + 0 ID=cds-WP_023993496.1;Parent=gene-C9E95_RS02935;Dbxref=GenBank:WP_023993496.1;Name=WP_023993496.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460113.1;locus_tag=C9E95_RS02935;product=biofilm master transcriptional regulator CsgD;protein_id=WP_023993496.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 18756 19151 . + . ID=gene-C9E95_RS02940;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=C9E95_RS02940;old_locus_tag=C9E95_02990 NZ_PYJW01000040.1 Protein Homology CDS 18756 19151 . + 0 ID=cds-WP_000833307.1;Parent=gene-C9E95_RS02940;Dbxref=GenBank:WP_000833307.1;Name=WP_000833307.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460112.1;locus_tag=C9E95_RS02940;product=curli production assembly/transport protein CsgE;protein_id=WP_000833307.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 19178 19594 . + . ID=gene-C9E95_RS02945;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=C9E95_RS02945;old_locus_tag=C9E95_02995 NZ_PYJW01000040.1 Protein Homology CDS 19178 19594 . + 0 ID=cds-WP_001264073.1;Parent=gene-C9E95_RS02945;Dbxref=GenBank:WP_001264073.1;Name=WP_001264073.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460111.1;locus_tag=C9E95_RS02945;product=curli production assembly/transport protein CsgF;protein_id=WP_001264073.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 19621 20454 . + . ID=gene-C9E95_RS02950;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=C9E95_RS02950;old_locus_tag=C9E95_03000 NZ_PYJW01000040.1 Protein Homology CDS 19621 20454 . + 0 ID=cds-WP_001137620.1;Parent=gene-C9E95_RS02950;Dbxref=GenBank:WP_001137620.1;Name=WP_001137620.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460110.1;locus_tag=C9E95_RS02950;product=curli production assembly/transport protein CsgG;protein_id=WP_001137620.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 20493 20975 . - . ID=gene-C9E95_RS02955;Name=C9E95_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02955;old_locus_tag=C9E95_03005 NZ_PYJW01000040.1 Protein Homology CDS 20493 20975 . - 0 ID=cds-WP_001546652.1;Parent=gene-C9E95_RS02955;Dbxref=GenBank:WP_001546652.1;Name=WP_001546652.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675581.1;locus_tag=C9E95_RS02955;product=DUF1097 domain-containing protein;protein_id=WP_001546652.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 21076 21630 . - . ID=gene-C9E95_RS02960;Name=C9E95_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02960;old_locus_tag=C9E95_03010 NZ_PYJW01000040.1 Protein Homology CDS 21076 21630 . - 0 ID=cds-WP_001001883.1;Parent=gene-C9E95_RS02960;Dbxref=GenBank:WP_001001883.1;Name=WP_001001883.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460108.1;locus_tag=C9E95_RS02960;product=TorD/DmsD family molecular chaperone;protein_id=WP_001001883.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 21654 22391 . - . ID=gene-C9E95_RS02965;Name=C9E95_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02965;old_locus_tag=C9E95_03015 NZ_PYJW01000040.1 Protein Homology CDS 21654 22391 . - 0 ID=cds-WP_000283643.1;Parent=gene-C9E95_RS02965;Dbxref=GenBank:WP_000283643.1;Name=WP_000283643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460107.1;locus_tag=C9E95_RS02965;product=phosphatase;protein_id=WP_000283643.1;transl_table=11 NZ_PYJW01000040.1 RefSeq gene 22476 23414 . - . ID=gene-C9E95_RS02970;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=C9E95_RS02970;old_locus_tag=C9E95_03020 NZ_PYJW01000040.1 Protein Homology CDS 22476 23414 . - 0 ID=cds-WP_000402552.1;Parent=gene-C9E95_RS02970;Dbxref=GenBank:WP_000402552.1;Name=WP_000402552.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460106.1;locus_tag=C9E95_RS02970;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_000402552.1;transl_table=11 ##sequence-region NZ_PYJW01000032.1 1 100915 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000032.1 RefSeq region 1 100915 . + . ID=NZ_PYJW01000032.1:1..100915;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000032.1 RefSeq gene 1 3405 . + . ID=gene-C9E95_RS01770;Name=shdA;gbkey=Gene;gene=shdA;gene_biotype=protein_coding;locus_tag=C9E95_RS01770;old_locus_tag=C9E95_01805;partial=true;start_range=.,1 NZ_PYJW01000032.1 Protein Homology CDS 1 3405 . + 0 ID=cds-WP_135369798.1;Parent=gene-C9E95_RS01770;Dbxref=GenBank:WP_135369798.1;Name=WP_135369798.1;Ontology_term=GO:0019867;gbkey=CDS;gene=shdA;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006597679.1;locus_tag=C9E95_RS01770;partial=true;product=fibronectin-binding autotransporter adhesin ShdA;protein_id=WP_135369798.1;start_range=.,1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 3567 4916 . - . ID=gene-C9E95_RS01775;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=C9E95_RS01775;old_locus_tag=C9E95_01810 NZ_PYJW01000032.1 Protein Homology CDS 3567 4916 . - 0 ID=cds-WP_020899077.1;Parent=gene-C9E95_RS01775;Dbxref=GenBank:WP_020899077.1;Name=WP_020899077.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461447.1;locus_tag=C9E95_RS01775;product=exodeoxyribonuclease VII large subunit;protein_id=WP_020899077.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 5077 6543 . + . ID=gene-C9E95_RS01780;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=C9E95_RS01780;old_locus_tag=C9E95_01815 NZ_PYJW01000032.1 Protein Homology CDS 5077 6543 . + 0 ID=cds-WP_000944174.1;Parent=gene-C9E95_RS01780;Dbxref=GenBank:WP_000944174.1;Name=WP_000944174.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=C9E95_RS01780;product=IMP dehydrogenase;protein_id=WP_000944174.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 6613 8190 . + . ID=gene-C9E95_RS01785;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=C9E95_RS01785;old_locus_tag=C9E95_01820 NZ_PYJW01000032.1 Protein Homology CDS 6613 8190 . + 0 ID=cds-WP_000138293.1;Parent=gene-C9E95_RS01785;Dbxref=GenBank:WP_000138293.1;Name=WP_000138293.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=C9E95_RS01785;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000138293.1;transl_table=11 NZ_PYJW01000032.1 RefSeq pseudogene 8326 8645 . + . ID=gene-C9E95_RS01790;Name=C9E95_RS01790;end_range=8645,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS01790;old_locus_tag=C9E95_01825;partial=true;pseudo=true;start_range=.,8326 NZ_PYJW01000032.1 Protein Homology CDS 8326 8645 . + 0 ID=cds-C9E95_RS01790;Parent=gene-C9E95_RS01790;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=8645,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611898.1;locus_tag=C9E95_RS01790;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,8326;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 8722 9051 . - . ID=gene-C9E95_RS01795;Name=C9E95_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01795;old_locus_tag=C9E95_01830 NZ_PYJW01000032.1 Protein Homology CDS 8722 9051 . - 0 ID=cds-WP_023994424.1;Parent=gene-C9E95_RS01795;Dbxref=GenBank:WP_023994424.1;Name=WP_023994424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461443.1;locus_tag=C9E95_RS01795;product=DUF1493 family protein;protein_id=WP_023994424.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 9036 9497 . - . ID=gene-C9E95_RS23645;Name=C9E95_RS23645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23645 NZ_PYJW01000032.1 Protein Homology CDS 9036 9497 . - 0 ID=cds-WP_000381628.1;Parent=gene-C9E95_RS23645;Dbxref=GenBank:WP_000381628.1;Name=WP_000381628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_154057295.1;locus_tag=C9E95_RS23645;product=STM2901 family protein;protein_id=WP_000381628.1;transl_table=11 NZ_PYJW01000032.1 RefSeq pseudogene 9637 9756 . + . ID=gene-C9E95_RS23355;Name=C9E95_RS23355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23355;partial=true;pseudo=true;start_range=.,9637 NZ_PYJW01000032.1 Protein Homology CDS 9637 9756 . + 0 ID=cds-C9E95_RS23355;Parent=gene-C9E95_RS23355;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448901.1;locus_tag=C9E95_RS23355;partial=true;product=hypothetical protein;pseudo=true;start_range=.,9637;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 9834 10025 . - . ID=gene-C9E95_RS01805;Name=C9E95_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01805;old_locus_tag=C9E95_01840 NZ_PYJW01000032.1 Protein Homology CDS 9834 10025 . - 0 ID=cds-WP_000075924.1;Parent=gene-C9E95_RS01805;Dbxref=GenBank:WP_000075924.1;Name=WP_000075924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461441.1;locus_tag=C9E95_RS01805;product=YfgG family protein;protein_id=WP_000075924.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 10204 10341 . + . ID=gene-C9E95_RS01810;Name=C9E95_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01810;old_locus_tag=C9E95_01845 NZ_PYJW01000032.1 Protein Homology CDS 10204 10341 . + 0 ID=cds-WP_061376141.1;Parent=gene-C9E95_RS01810;Dbxref=GenBank:WP_061376141.1;Name=WP_061376141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448898.1;locus_tag=C9E95_RS01810;product=hypothetical protein;protein_id=WP_061376141.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 10438 12651 . + . ID=gene-C9E95_RS01815;Name=C9E95_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01815;old_locus_tag=C9E95_01850 NZ_PYJW01000032.1 Protein Homology CDS 10438 12651 . + 0 ID=cds-WP_000773648.1;Parent=gene-C9E95_RS01815;Dbxref=GenBank:WP_000773648.1;Name=WP_000773648.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461438.1;locus_tag=C9E95_RS01815;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_000773648.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 12687 14228 . - . ID=gene-C9E95_RS01820;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=C9E95_RS01820;old_locus_tag=C9E95_01855 NZ_PYJW01000032.1 Protein Homology CDS 12687 14228 . - 0 ID=cds-WP_001123330.1;Parent=gene-C9E95_RS01820;Dbxref=GenBank:WP_001123330.1;Name=WP_001123330.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461437.1;locus_tag=C9E95_RS01820;product=exopolyphosphatase;protein_id=WP_001123330.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 14233 16299 . - . ID=gene-C9E95_RS01825;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=C9E95_RS01825;old_locus_tag=C9E95_01860 NZ_PYJW01000032.1 Protein Homology CDS 14233 16299 . - 0 ID=cds-WP_000529555.1;Parent=gene-C9E95_RS01825;Dbxref=GenBank:WP_000529555.1;Name=WP_000529555.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461436.1;locus_tag=C9E95_RS01825;product=polyphosphate kinase 1;protein_id=WP_000529555.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 16488 17126 . - . ID=gene-C9E95_RS01830;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=C9E95_RS01830;old_locus_tag=C9E95_01865 NZ_PYJW01000032.1 Protein Homology CDS 16488 17126 . - 0 ID=cds-WP_001028589.1;Parent=gene-C9E95_RS01830;Dbxref=GenBank:WP_001028589.1;Name=WP_001028589.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461435.1;locus_tag=C9E95_RS01830;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_001028589.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 17126 18163 . - . ID=gene-C9E95_RS01835;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=C9E95_RS01835;old_locus_tag=C9E95_01870 NZ_PYJW01000032.1 Protein Homology CDS 17126 18163 . - 0 ID=cds-WP_000130475.1;Parent=gene-C9E95_RS01835;Dbxref=GenBank:WP_000130475.1;Name=WP_000130475.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656828.1;locus_tag=C9E95_RS01835;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_000130475.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 18577 19203 . + . ID=gene-C9E95_RS01845;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=C9E95_RS01845;old_locus_tag=C9E95_01880 NZ_PYJW01000032.1 Protein Homology CDS 18577 19203 . + 0 ID=cds-WP_000706208.1;Parent=gene-C9E95_RS01845;Dbxref=GenBank:WP_000706208.1;Name=WP_000706208.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=C9E95_RS01845;product=uracil phosphoribosyltransferase;protein_id=WP_000706208.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 19291 20580 . + . ID=gene-C9E95_RS01850;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=C9E95_RS01850;old_locus_tag=C9E95_01885 NZ_PYJW01000032.1 Protein Homology CDS 19291 20580 . + 0 ID=cds-WP_023138795.1;Parent=gene-C9E95_RS01850;Dbxref=GenBank:WP_023138795.1;Name=WP_023138795.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004866193.1;locus_tag=C9E95_RS01850;product=uracil permease;protein_id=WP_023138795.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 20675 21376 . + . ID=gene-C9E95_RS01855;Name=C9E95_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01855;old_locus_tag=C9E95_01890 NZ_PYJW01000032.1 Protein Homology CDS 20675 21376 . + 0 ID=cds-WP_061835882.1;Parent=gene-C9E95_RS01855;Dbxref=GenBank:WP_061835882.1;Name=WP_061835882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=C9E95_RS01855;product=DnaA inactivator Hda;protein_id=WP_061835882.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 21403 21762 . - . ID=gene-C9E95_RS01860;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=C9E95_RS01860;old_locus_tag=C9E95_01895 NZ_PYJW01000032.1 Protein Homology CDS 21403 21762 . - 0 ID=cds-WP_000132648.1;Parent=gene-C9E95_RS01860;Dbxref=GenBank:WP_000132648.1;Name=WP_000132648.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461430.1;locus_tag=C9E95_RS01860;product=arsenate reductase (glutaredoxin);protein_id=WP_000132648.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 21802 23265 . - . ID=gene-C9E95_RS01865;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=C9E95_RS01865;old_locus_tag=C9E95_01900 NZ_PYJW01000032.1 Protein Homology CDS 21802 23265 . - 0 ID=cds-WP_000489635.1;Parent=gene-C9E95_RS01865;Dbxref=GenBank:WP_000489635.1;Name=WP_000489635.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461429.1;locus_tag=C9E95_RS01865;product=beta-barrel assembly-enhancing protease;protein_id=WP_000489635.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 23473 24540 . + . ID=gene-C9E95_RS01870;Name=C9E95_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01870;old_locus_tag=C9E95_01905 NZ_PYJW01000032.1 Protein Homology CDS 23473 24540 . + 0 ID=cds-WP_000892057.1;Parent=gene-C9E95_RS01870;Dbxref=GenBank:WP_000892057.1;Name=WP_000892057.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461428.1;locus_tag=C9E95_RS01870;product=AI-2E family transporter;protein_id=WP_000892057.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 24816 26003 . + . ID=gene-C9E95_RS01875;Name=C9E95_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01875;old_locus_tag=C9E95_01910 NZ_PYJW01000032.1 Protein Homology CDS 24816 26003 . + 0 ID=cds-WP_080203942.1;Parent=gene-C9E95_RS01875;Dbxref=GenBank:WP_080203942.1;Name=WP_080203942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667973.1;locus_tag=C9E95_RS01875;product=sugar diacid recognition domain-containing protein;protein_id=WP_080203942.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 26071 27339 . + . ID=gene-C9E95_RS01880;Name=C9E95_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01880;old_locus_tag=C9E95_01915 NZ_PYJW01000032.1 Protein Homology CDS 26071 27339 . + 0 ID=cds-WP_000200859.1;Parent=gene-C9E95_RS01880;Dbxref=GenBank:WP_000200859.1;Name=WP_000200859.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090684.1;locus_tag=C9E95_RS01880;product=GntP family permease;protein_id=WP_000200859.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 27345 28484 . + . ID=gene-C9E95_RS01885;Name=C9E95_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01885;old_locus_tag=C9E95_01920 NZ_PYJW01000032.1 Protein Homology CDS 27345 28484 . + 0 ID=cds-WP_000706377.1;Parent=gene-C9E95_RS01885;Dbxref=GenBank:WP_000706377.1;Name=WP_000706377.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000706371.1;locus_tag=C9E95_RS01885;product=glycerate kinase;protein_id=WP_000706377.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 28531 29001 . - . ID=gene-C9E95_RS01890;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=C9E95_RS01890;old_locus_tag=C9E95_01925 NZ_PYJW01000032.1 Protein Homology CDS 28531 29001 . - 0 ID=cds-WP_001068686.1;Parent=gene-C9E95_RS01890;Dbxref=GenBank:WP_001068686.1;Name=WP_001068686.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461426.1;locus_tag=C9E95_RS01890;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001068686.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 29001 29573 . - . ID=gene-C9E95_RS01895;Name=C9E95_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01895;old_locus_tag=C9E95_01930 NZ_PYJW01000032.1 Protein Homology CDS 29001 29573 . - 0 ID=cds-WP_000189061.1;Parent=gene-C9E95_RS01895;Dbxref=GenBank:WP_000189061.1;Name=WP_000189061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=C9E95_RS01895;product=glycine cleavage system transcriptional repressor;protein_id=WP_000189061.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 29719 30597 . + . ID=gene-C9E95_RS01900;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=C9E95_RS01900;old_locus_tag=C9E95_01935 NZ_PYJW01000032.1 Protein Homology CDS 29719 30597 . + 0 ID=cds-WP_000494020.1;Parent=gene-C9E95_RS01900;Dbxref=GenBank:WP_000494020.1;Name=WP_000494020.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=C9E95_RS01900;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_000494020.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 30614 31648 . + . ID=gene-C9E95_RS01905;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=C9E95_RS01905;old_locus_tag=C9E95_01940 NZ_PYJW01000032.1 Protein Homology CDS 30614 31648 . + 0 ID=cds-WP_080203943.1;Parent=gene-C9E95_RS01905;Dbxref=GenBank:WP_080203943.1;Name=WP_080203943.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461423.1;locus_tag=C9E95_RS01905;product=outer membrane protein assembly factor BamC;protein_id=WP_080203943.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 31823 32536 . + . ID=gene-C9E95_RS01910;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=C9E95_RS01910;old_locus_tag=C9E95_01945 NZ_PYJW01000032.1 Protein Homology CDS 31823 32536 . + 0 ID=cds-WP_001171630.1;Parent=gene-C9E95_RS01910;Dbxref=GenBank:WP_001171630.1;Name=WP_001171630.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=C9E95_RS01910;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001171630.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 32667 33530 . + . ID=gene-C9E95_RS01915;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=C9E95_RS01915;old_locus_tag=C9E95_01950 NZ_PYJW01000032.1 Protein Homology CDS 32667 33530 . + 0 ID=cds-WP_001267523.1;Parent=gene-C9E95_RS01915;Dbxref=GenBank:WP_001267523.1;Name=WP_001267523.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461421.1;locus_tag=C9E95_RS01915;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_001267523.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 33546 35564 . + . ID=gene-C9E95_RS01920;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=C9E95_RS01920;old_locus_tag=C9E95_01955 NZ_PYJW01000032.1 Protein Homology CDS 33546 35564 . + 0 ID=cds-WP_080203944.1;Parent=gene-C9E95_RS01920;Dbxref=GenBank:WP_080203944.1;Name=WP_080203944.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461420.1;locus_tag=C9E95_RS01920;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WP_080203944.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 35591 35791 . - . ID=gene-C9E95_RS01925;Name=C9E95_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01925;old_locus_tag=C9E95_01960 NZ_PYJW01000032.1 Protein Homology CDS 35591 35791 . - 0 ID=cds-WP_000383839.1;Parent=gene-C9E95_RS01925;Dbxref=GenBank:WP_000383839.1;Name=WP_000383839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461419.1;locus_tag=C9E95_RS01925;product=YpfN family protein;protein_id=WP_000383839.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 35819 36946 . - . ID=gene-C9E95_RS01930;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=C9E95_RS01930;old_locus_tag=C9E95_01965 NZ_PYJW01000032.1 Protein Homology CDS 35819 36946 . - 0 ID=cds-WP_001277822.1;Parent=gene-C9E95_RS01930;Dbxref=GenBank:WP_001277822.1;Name=WP_001277822.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=C9E95_RS01930;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_001277822.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 36950 37306 . - . ID=gene-C9E95_RS01935;Name=C9E95_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01935;old_locus_tag=C9E95_01970 NZ_PYJW01000032.1 Protein Homology CDS 36950 37306 . - 0 ID=cds-WP_000631923.1;Parent=gene-C9E95_RS01935;Dbxref=GenBank:WP_000631923.1;Name=WP_000631923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461417.1;locus_tag=C9E95_RS01935;product=ArsC family reductase;protein_id=WP_000631923.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 37719 37778 . + . ID=gene-C9E95_RS01940;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=C9E95_RS01940;old_locus_tag=C9E95_01975 NZ_PYJW01000032.1 Protein Homology CDS 37719 37778 . + 0 ID=cds-WP_001386977.1;Parent=gene-C9E95_RS01940;Dbxref=GenBank:WP_001386977.1;Name=WP_001386977.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=C9E95_RS01940;product=protein YpfM;protein_id=WP_001386977.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 37880 40993 . - . ID=gene-C9E95_RS01945;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=C9E95_RS01945;old_locus_tag=C9E95_01980 NZ_PYJW01000032.1 Protein Homology CDS 37880 40993 . - 0 ID=cds-WP_001263076.1;Parent=gene-C9E95_RS01945;Dbxref=GenBank:WP_001263076.1;Name=WP_001263076.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461416.1;locus_tag=C9E95_RS01945;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_001263076.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 41178 42878 . - . ID=gene-C9E95_RS01950;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=C9E95_RS01950;old_locus_tag=C9E95_01985 NZ_PYJW01000032.1 Protein Homology CDS 41178 42878 . - 0 ID=cds-WP_080203945.1;Parent=gene-C9E95_RS01950;Dbxref=GenBank:WP_080203945.1;Name=WP_080203945.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461415.1;locus_tag=C9E95_RS01950;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_080203945.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 43064 45025 . + . ID=gene-C9E95_RS01955;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=C9E95_RS01955;old_locus_tag=C9E95_01990 NZ_PYJW01000032.1 Protein Homology CDS 43064 45025 . + 0 ID=cds-WP_023181774.1;Parent=gene-C9E95_RS01955;Dbxref=GenBank:WP_023181774.1;Name=WP_023181774.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461414.1;locus_tag=C9E95_RS01955;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_023181774.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 45474 46772 . - . ID=gene-C9E95_RS01960;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=C9E95_RS01960;old_locus_tag=C9E95_02000 NZ_PYJW01000032.1 Protein Homology CDS 45474 46772 . - 0 ID=cds-WP_080219566.1;Parent=gene-C9E95_RS01960;Dbxref=GenBank:WP_080219566.1;Name=WP_080219566.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461413.1;locus_tag=C9E95_RS01960;product=penicillin binding protein PBP4B;protein_id=WP_080219566.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 46976 47551 . + . ID=gene-C9E95_RS01965;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=C9E95_RS01965;old_locus_tag=C9E95_02005 NZ_PYJW01000032.1 Protein Homology CDS 46976 47551 . + 0 ID=cds-WP_000084033.1;Parent=gene-C9E95_RS01965;Dbxref=GenBank:WP_000084033.1;Name=WP_000084033.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461412.1;locus_tag=C9E95_RS01965;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_000084033.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 47676 48719 . + . ID=gene-C9E95_RS01970;Name=C9E95_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01970;old_locus_tag=C9E95_02010 NZ_PYJW01000032.1 Protein Homology CDS 47676 48719 . + 0 ID=cds-WP_001270669.1;Parent=gene-C9E95_RS01970;Dbxref=GenBank:WP_001270669.1;Name=WP_001270669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461411.1;locus_tag=C9E95_RS01970;product=DUF1176 domain-containing protein;protein_id=WP_001270669.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 48847 49077 . + . ID=gene-C9E95_RS01975;Name=C9E95_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01975;old_locus_tag=C9E95_02015 NZ_PYJW01000032.1 Protein Homology CDS 48847 49077 . + 0 ID=cds-WP_000700635.1;Parent=gene-C9E95_RS01975;Dbxref=GenBank:WP_000700635.1;Name=WP_000700635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461410.1;locus_tag=C9E95_RS01975;product=hypothetical protein;protein_id=WP_000700635.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 49140 51140 . - . ID=gene-C9E95_RS01980;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=C9E95_RS01980;old_locus_tag=C9E95_02020 NZ_PYJW01000032.1 Protein Homology CDS 49140 51140 . - 0 ID=cds-WP_000087325.1;Parent=gene-C9E95_RS01980;Dbxref=GenBank:WP_000087325.1;Name=WP_000087325.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=C9E95_RS01980;product=transketolase;protein_id=WP_000087325.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 51160 52110 . - . ID=gene-C9E95_RS01985;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=C9E95_RS01985;old_locus_tag=C9E95_02025 NZ_PYJW01000032.1 Protein Homology CDS 51160 52110 . - 0 ID=cds-WP_023993735.1;Parent=gene-C9E95_RS01985;Dbxref=GenBank:WP_023993735.1;Name=WP_023993735.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461408.1;locus_tag=C9E95_RS01985;product=transaldolase;protein_id=WP_023993735.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 52382 54661 . + . ID=gene-C9E95_RS01990;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=C9E95_RS01990;old_locus_tag=C9E95_02035 NZ_PYJW01000032.1 Protein Homology CDS 52382 54661 . + 0 ID=cds-WP_000344299.1;Parent=gene-C9E95_RS01990;Dbxref=GenBank:WP_000344299.1;Name=WP_000344299.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461407.1;locus_tag=C9E95_RS01990;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_000344299.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 55078 55413 . + . ID=gene-C9E95_RS01995;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=C9E95_RS01995;old_locus_tag=C9E95_02040 NZ_PYJW01000032.1 Protein Homology CDS 55078 55413 . + 0 ID=cds-WP_001031445.1;Parent=gene-C9E95_RS01995;Dbxref=GenBank:WP_001031445.1;Name=WP_001031445.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461405.1;locus_tag=C9E95_RS01995;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_001031445.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 55426 55905 . + . ID=gene-C9E95_RS02000;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=C9E95_RS02000;old_locus_tag=C9E95_02045 NZ_PYJW01000032.1 Protein Homology CDS 55426 55905 . + 0 ID=cds-WP_000820751.1;Parent=gene-C9E95_RS02000;Dbxref=GenBank:WP_000820751.1;Name=WP_000820751.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461404.1;locus_tag=C9E95_RS02000;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_000820751.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 55883 56572 . + . ID=gene-C9E95_RS02005;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=C9E95_RS02005;old_locus_tag=C9E95_02050 NZ_PYJW01000032.1 Protein Homology CDS 55883 56572 . + 0 ID=cds-WP_000733862.1;Parent=gene-C9E95_RS02005;Dbxref=GenBank:WP_000733862.1;Name=WP_000733862.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461403.1;locus_tag=C9E95_RS02005;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_000733862.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 56569 57372 . + . ID=gene-C9E95_RS02010;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=C9E95_RS02010;old_locus_tag=C9E95_02055 NZ_PYJW01000032.1 Protein Homology CDS 56569 57372 . + 0 ID=cds-WP_000997654.1;Parent=gene-C9E95_RS02010;Dbxref=GenBank:WP_000997654.1;Name=WP_000997654.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461402.1;locus_tag=C9E95_RS02010;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_000997654.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 57369 58385 . + . ID=gene-C9E95_RS02015;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=C9E95_RS02015;old_locus_tag=C9E95_02060 NZ_PYJW01000032.1 Protein Homology CDS 57369 58385 . + 0 ID=cds-WP_000582927.1;Parent=gene-C9E95_RS02015;Dbxref=GenBank:WP_000582927.1;Name=WP_000582927.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461401.1;locus_tag=C9E95_RS02015;product=phosphate acetyltransferase;protein_id=WP_000582927.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 58426 58716 . + . ID=gene-C9E95_RS02020;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=C9E95_RS02020;old_locus_tag=C9E95_02065 NZ_PYJW01000032.1 Protein Homology CDS 58426 58716 . + 0 ID=cds-WP_000387716.1;Parent=gene-C9E95_RS02020;Dbxref=GenBank:WP_000387716.1;Name=WP_000387716.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461400.1;locus_tag=C9E95_RS02020;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387716.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 58829 59116 . + . ID=gene-C9E95_RS02025;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=C9E95_RS02025;old_locus_tag=C9E95_02070 NZ_PYJW01000032.1 Protein Homology CDS 58829 59116 . + 0 ID=cds-WP_001522340.1;Parent=gene-C9E95_RS02025;Dbxref=GenBank:WP_001522340.1;Name=WP_001522340.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=C9E95_RS02025;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_001522340.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 59128 60531 . + . ID=gene-C9E95_RS02030;Name=C9E95_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02030;old_locus_tag=C9E95_02075 NZ_PYJW01000032.1 Protein Homology CDS 59128 60531 . + 0 ID=cds-WP_001075640.1;Parent=gene-C9E95_RS02030;Dbxref=GenBank:WP_001075640.1;Name=WP_001075640.1;Ontology_term=GO:0004029,GO:0008774;gbkey=CDS;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA,acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=C9E95_RS02030;product=aldehyde dehydrogenase family protein;protein_id=WP_001075640.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 60542 61381 . + . ID=gene-C9E95_RS02035;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=C9E95_RS02035;old_locus_tag=C9E95_02080 NZ_PYJW01000032.1 Protein Homology CDS 60542 61381 . + 0 ID=cds-WP_080203946.1;Parent=gene-C9E95_RS02035;Dbxref=GenBank:WP_080203946.1;Name=WP_080203946.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461397.1;locus_tag=C9E95_RS02035;product=ethanolamine utilization protein EutJ;protein_id=WP_080203946.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 61371 62558 . + . ID=gene-C9E95_RS02040;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=C9E95_RS02040;old_locus_tag=C9E95_02085 NZ_PYJW01000032.1 Protein Homology CDS 61371 62558 . + 0 ID=cds-WP_001147505.1;Parent=gene-C9E95_RS02040;Dbxref=GenBank:WP_001147505.1;Name=WP_001147505.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461396.1;locus_tag=C9E95_RS02040;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_001147505.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 62678 63904 . + . ID=gene-C9E95_RS02045;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=C9E95_RS02045;old_locus_tag=C9E95_02090 NZ_PYJW01000032.1 Protein Homology CDS 62678 63904 . + 0 ID=cds-WP_000512359.1;Parent=gene-C9E95_RS02045;Dbxref=GenBank:WP_000512359.1;Name=WP_000512359.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461395.1;locus_tag=C9E95_RS02045;product=ethanolamine utilization protein EutH;protein_id=WP_000512359.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 63901 65304 . + . ID=gene-C9E95_RS02050;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=C9E95_RS02050;old_locus_tag=C9E95_02095 NZ_PYJW01000032.1 Protein Homology CDS 63901 65304 . + 0 ID=cds-WP_001097522.1;Parent=gene-C9E95_RS02050;Dbxref=GenBank:WP_001097522.1;Name=WP_001097522.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461394.1;locus_tag=C9E95_RS02050;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_001097522.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 65316 66677 . + . ID=gene-C9E95_RS02055;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=C9E95_RS02055;old_locus_tag=C9E95_02100 NZ_PYJW01000032.1 Protein Homology CDS 65316 66677 . + 0 ID=cds-WP_000769990.1;Parent=gene-C9E95_RS02055;Dbxref=GenBank:WP_000769990.1;Name=WP_000769990.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461393.1;locus_tag=C9E95_RS02055;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WP_000769990.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 66697 67593 . + . ID=gene-C9E95_RS02060;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=C9E95_RS02060;old_locus_tag=C9E95_02105 NZ_PYJW01000032.1 Protein Homology CDS 66697 67593 . + 0 ID=cds-WP_000372344.1;Parent=gene-C9E95_RS02060;Dbxref=GenBank:WP_000372344.1;Name=WP_000372344.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461392.1;locus_tag=C9E95_RS02060;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_000372344.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 67603 68262 . + . ID=gene-C9E95_RS02065;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=C9E95_RS02065;old_locus_tag=C9E95_02110 NZ_PYJW01000032.1 Protein Homology CDS 67603 68262 . + 0 ID=cds-WP_001111056.1;Parent=gene-C9E95_RS02065;Dbxref=GenBank:WP_001111056.1;Name=WP_001111056.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461391.1;locus_tag=C9E95_RS02065;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_001111056.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 68275 68769 . + . ID=gene-C9E95_RS02070;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=C9E95_RS02070;old_locus_tag=C9E95_02115 NZ_PYJW01000032.1 Protein Homology CDS 68275 68769 . + 0 ID=cds-WP_000606266.1;Parent=gene-C9E95_RS02070;Dbxref=GenBank:WP_000606266.1;Name=WP_000606266.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461390.1;locus_tag=C9E95_RS02070;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_000606266.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 68817 69869 . + . ID=gene-C9E95_RS02075;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=C9E95_RS02075;old_locus_tag=C9E95_02120 NZ_PYJW01000032.1 Protein Homology CDS 68817 69869 . + 0 ID=cds-WP_000753666.1;Parent=gene-C9E95_RS02075;Dbxref=GenBank:WP_000753666.1;Name=WP_000753666.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461389.1;locus_tag=C9E95_RS02075;product=HTH-type transcriptional regulator EutR;protein_id=WP_000753666.1;transl_table=11 NZ_PYJW01000032.1 RefSeq pseudogene 69961 70233 . - . ID=gene-C9E95_RS02080;Name=C9E95_RS02080;end_range=70233,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS02080;old_locus_tag=C9E95_02125;partial=true;pseudo=true;start_range=.,69961 NZ_PYJW01000032.1 Protein Homology CDS 69961 70233 . - 0 ID=cds-C9E95_RS02080;Parent=gene-C9E95_RS02080;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=70233,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000344434.1;locus_tag=C9E95_RS02080;partial=true;product=DUF1963 domain-containing protein;pseudo=true;start_range=.,69961;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 70309 70638 . - . ID=gene-C9E95_RS02085;Name=C9E95_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02085;old_locus_tag=C9E95_02130 NZ_PYJW01000032.1 Protein Homology CDS 70309 70638 . - 0 ID=cds-WP_001194342.1;Parent=gene-C9E95_RS02085;Dbxref=GenBank:WP_001194342.1;Name=WP_001194342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461387.1;locus_tag=C9E95_RS02085;product=hypothetical protein;protein_id=WP_001194342.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 70659 71558 . - . ID=gene-C9E95_RS02090;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=C9E95_RS02090;old_locus_tag=C9E95_02135 NZ_PYJW01000032.1 Protein Homology CDS 70659 71558 . - 0 ID=cds-WP_001619258.1;Parent=gene-C9E95_RS02090;Dbxref=GenBank:WP_001619258.1;Name=WP_001619258.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461386.1;locus_tag=C9E95_RS02090;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_001619258.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 71561 72430 . - . ID=gene-C9E95_RS02095;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=C9E95_RS02095;old_locus_tag=C9E95_02140 NZ_PYJW01000032.1 Protein Homology CDS 71561 72430 . - 0 ID=cds-WP_000102880.1;Parent=gene-C9E95_RS02095;Dbxref=GenBank:WP_000102880.1;Name=WP_000102880.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461385.1;locus_tag=C9E95_RS02095;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_000102880.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 72643 73068 . + . ID=gene-C9E95_RS02100;Name=C9E95_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02100;old_locus_tag=C9E95_02145 NZ_PYJW01000032.1 Protein Homology CDS 72643 73068 . + 0 ID=cds-WP_000406008.1;Parent=gene-C9E95_RS02100;Dbxref=GenBank:WP_000406008.1;Name=WP_000406008.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=C9E95_RS02100;product=GNAT family acetyltransferase;protein_id=WP_000406008.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 73055 73504 . + . ID=gene-C9E95_RS02105;Name=C9E95_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02105;old_locus_tag=C9E95_02150 NZ_PYJW01000032.1 Protein Homology CDS 73055 73504 . + 0 ID=cds-WP_000842940.1;Parent=gene-C9E95_RS02105;Dbxref=GenBank:WP_000842940.1;Name=WP_000842940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461383.1;locus_tag=C9E95_RS02105;product=DUF2919 domain-containing protein;protein_id=WP_000842940.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 73566 74141 . + . ID=gene-C9E95_RS02110;Name=C9E95_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02110;old_locus_tag=C9E95_02155 NZ_PYJW01000032.1 Protein Homology CDS 73566 74141 . + 0 ID=cds-WP_000838968.1;Parent=gene-C9E95_RS02110;Dbxref=GenBank:WP_000838968.1;Name=WP_000838968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461382.1;locus_tag=C9E95_RS02110;product=RpoE-regulated lipoprotein;protein_id=WP_000838968.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 74236 75135 . + . ID=gene-C9E95_RS02115;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=C9E95_RS02115;old_locus_tag=C9E95_02160 NZ_PYJW01000032.1 Protein Homology CDS 74236 75135 . + 0 ID=cds-WP_000084583.1;Parent=gene-C9E95_RS02115;Dbxref=GenBank:WP_000084583.1;Name=WP_000084583.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461381.1;locus_tag=C9E95_RS02115;product=porphyrinogen peroxidase;protein_id=WP_000084583.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 75373 76164 . + . ID=gene-C9E95_RS02120;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=C9E95_RS02120;old_locus_tag=C9E95_02165 NZ_PYJW01000032.1 Protein Homology CDS 75373 76164 . + 0 ID=cds-WP_000517460.1;Parent=gene-C9E95_RS02120;Dbxref=GenBank:WP_000517460.1;Name=WP_000517460.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461380.1;locus_tag=C9E95_RS02120;product=SDR family oxidoreductase UcpA;protein_id=WP_000517460.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 76322 77338 . + . ID=gene-C9E95_RS02125;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=C9E95_RS02125;old_locus_tag=C9E95_02170 NZ_PYJW01000032.1 Protein Homology CDS 76322 77338 . + 0 ID=cds-WP_000290273.1;Parent=gene-C9E95_RS02125;Dbxref=GenBank:WP_000290273.1;Name=WP_000290273.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461379.1;locus_tag=C9E95_RS02125;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_000290273.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 77338 78171 . + . ID=gene-C9E95_RS02130;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=C9E95_RS02130;old_locus_tag=C9E95_02175 NZ_PYJW01000032.1 Protein Homology CDS 77338 78171 . + 0 ID=cds-WP_000881746.1;Parent=gene-C9E95_RS02130;Dbxref=GenBank:WP_000881746.1;Name=WP_000881746.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=C9E95_RS02130;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_000881746.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 78171 79046 . + . ID=gene-C9E95_RS02135;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=C9E95_RS02135;old_locus_tag=C9E95_02180 NZ_PYJW01000032.1 Protein Homology CDS 78171 79046 . + 0 ID=cds-WP_000852705.1;Parent=gene-C9E95_RS02135;Dbxref=GenBank:WP_000852705.1;Name=WP_000852705.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461377.1;locus_tag=C9E95_RS02135;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_000852705.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 79036 80130 . + . ID=gene-C9E95_RS02140;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=C9E95_RS02140;old_locus_tag=C9E95_02185 NZ_PYJW01000032.1 Protein Homology CDS 79036 80130 . + 0 ID=cds-WP_023993743.1;Parent=gene-C9E95_RS02140;Dbxref=GenBank:WP_023993743.1;Name=WP_023993743.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461376.1;locus_tag=C9E95_RS02140;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_023993743.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 80250 81161 . + . ID=gene-C9E95_RS02145;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=C9E95_RS02145;old_locus_tag=C9E95_02190 NZ_PYJW01000032.1 Protein Homology CDS 80250 81161 . + 0 ID=cds-WP_023993744.1;Parent=gene-C9E95_RS02145;Dbxref=GenBank:WP_023993744.1;Name=WP_023993744.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461375.1;locus_tag=C9E95_RS02145;product=cysteine synthase CysM;protein_id=WP_023993744.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 81413 82021 . + . ID=gene-C9E95_RS02150;Name=C9E95_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02150;old_locus_tag=C9E95_02195 NZ_PYJW01000032.1 Protein Homology CDS 81413 82021 . + 0 ID=cds-WP_000666525.1;Parent=gene-C9E95_RS02150;Dbxref=GenBank:WP_000666525.1;Name=WP_000666525.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000666526.1;locus_tag=C9E95_RS02150;product=tetratricopeptide repeat protein;protein_id=WP_000666525.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 82121 82504 . - . ID=gene-C9E95_RS02155;Name=C9E95_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02155;old_locus_tag=C9E95_02200 NZ_PYJW01000032.1 Protein Homology CDS 82121 82504 . - 0 ID=cds-WP_000710732.1;Parent=gene-C9E95_RS02155;Dbxref=GenBank:WP_000710732.1;Name=WP_000710732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000710732.1;locus_tag=C9E95_RS02155;product=YfeK family protein;protein_id=WP_000710732.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 82563 83282 . - . ID=gene-C9E95_RS02160;Name=C9E95_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02160;old_locus_tag=C9E95_02205 NZ_PYJW01000032.1 Protein Homology CDS 82563 83282 . - 0 ID=cds-WP_001263753.1;Parent=gene-C9E95_RS02160;Dbxref=GenBank:WP_001263753.1;Name=WP_001263753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461372.1;locus_tag=C9E95_RS02160;product=GMP synthase;protein_id=WP_001263753.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 83297 84589 . - . ID=gene-C9E95_RS02165;Name=ptsJ;gbkey=Gene;gene=ptsJ;gene_biotype=protein_coding;locus_tag=C9E95_RS02165;old_locus_tag=C9E95_02210 NZ_PYJW01000032.1 Protein Homology CDS 83297 84589 . - 0 ID=cds-WP_000565115.1;Parent=gene-C9E95_RS02165;Dbxref=GenBank:WP_000565115.1;Name=WP_000565115.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptsJ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461371.1;locus_tag=C9E95_RS02165;product=transcriptional regulator PtsJ;protein_id=WP_000565115.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 84672 85538 . + . ID=gene-C9E95_RS02170;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=C9E95_RS02170;old_locus_tag=C9E95_02215 NZ_PYJW01000032.1 Protein Homology CDS 84672 85538 . + 0 ID=cds-WP_000529613.1;Parent=gene-C9E95_RS02170;Dbxref=GenBank:WP_000529613.1;Name=WP_000529613.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461370.1;locus_tag=C9E95_RS02170;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_000529613.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 85535 85774 . + . ID=gene-C9E95_RS02175;Name=C9E95_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02175;old_locus_tag=C9E95_02220 NZ_PYJW01000032.1 Protein Homology CDS 85535 85774 . + 0 ID=cds-WP_000844541.1;Parent=gene-C9E95_RS02175;Dbxref=GenBank:WP_000844541.1;Name=WP_000844541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461369.1;locus_tag=C9E95_RS02175;product=hypothetical protein;protein_id=WP_000844541.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 85924 86433 . - . ID=gene-C9E95_RS02180;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=C9E95_RS02180;old_locus_tag=C9E95_02225 NZ_PYJW01000032.1 Protein Homology CDS 85924 86433 . - 0 ID=cds-WP_000522253.1;Parent=gene-C9E95_RS02180;Dbxref=GenBank:WP_000522253.1;Name=WP_000522253.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=C9E95_RS02180;product=PTS glucose transporter subunit IIA;protein_id=WP_000522253.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 86474 88201 . - . ID=gene-C9E95_RS02185;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=C9E95_RS02185;old_locus_tag=C9E95_02230 NZ_PYJW01000032.1 Protein Homology CDS 86474 88201 . - 0 ID=cds-WP_000623118.1;Parent=gene-C9E95_RS02185;Dbxref=GenBank:WP_000623118.1;Name=WP_000623118.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870786.1;locus_tag=C9E95_RS02185;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_000623118.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 88250 88507 . - . ID=gene-C9E95_RS02190;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=C9E95_RS02190;old_locus_tag=C9E95_02235 NZ_PYJW01000032.1 Protein Homology CDS 88250 88507 . - 0 ID=cds-WP_000487600.1;Parent=gene-C9E95_RS02190;Dbxref=GenBank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=C9E95_RS02190;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 88891 89862 . - . ID=gene-C9E95_RS02195;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=C9E95_RS02195;old_locus_tag=C9E95_02240 NZ_PYJW01000032.1 Protein Homology CDS 88891 89862 . - 0 ID=cds-WP_000036904.1;Parent=gene-C9E95_RS02195;Dbxref=GenBank:WP_000036904.1;Name=WP_000036904.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=C9E95_RS02195;product=cysteine synthase A;protein_id=WP_000036904.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 90026 90787 . - . ID=gene-C9E95_RS02200;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=C9E95_RS02200;old_locus_tag=C9E95_02245 NZ_PYJW01000032.1 Protein Homology CDS 90026 90787 . - 0 ID=cds-WP_000255006.1;Parent=gene-C9E95_RS02200;Dbxref=GenBank:WP_000255006.1;Name=WP_000255006.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461364.1;locus_tag=C9E95_RS02200;product=sulfate transporter CysZ;protein_id=WP_000255006.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 91019 92005 . + . ID=gene-C9E95_RS02205;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=C9E95_RS02205;old_locus_tag=C9E95_02250 NZ_PYJW01000032.1 Protein Homology CDS 91019 92005 . + 0 ID=cds-WP_000983131.1;Parent=gene-C9E95_RS02205;Dbxref=GenBank:WP_000983131.1;Name=WP_000983131.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461363.1;locus_tag=C9E95_RS02205;product=cell division protein ZipA;protein_id=WP_000983131.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 92077 94092 . + . ID=gene-C9E95_RS02210;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=C9E95_RS02210;old_locus_tag=C9E95_02255 NZ_PYJW01000032.1 Protein Homology CDS 92077 94092 . + 0 ID=cds-WP_135369799.1;Parent=gene-C9E95_RS02210;Dbxref=GenBank:WP_135369799.1;Name=WP_135369799.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461362.1;locus_tag=C9E95_RS02210;product=NAD-dependent DNA ligase LigA;protein_id=WP_135369799.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 94094 94312 . + . ID=gene-C9E95_RS02215;Name=C9E95_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02215;old_locus_tag=C9E95_02260 NZ_PYJW01000032.1 Protein Homology CDS 94094 94312 . + 0 ID=cds-WP_001519708.1;Parent=gene-C9E95_RS02215;Dbxref=GenBank:WP_001519708.1;Name=WP_001519708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=C9E95_RS02215;product=DUF3820 family protein;protein_id=WP_001519708.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 94309 95307 . - . ID=gene-C9E95_RS02220;Name=C9E95_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02220;old_locus_tag=C9E95_02265 NZ_PYJW01000032.1 Protein Homology CDS 94309 95307 . - 0 ID=cds-WP_000765580.1;Parent=gene-C9E95_RS02220;Dbxref=GenBank:WP_000765580.1;Name=WP_000765580.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461360.2;locus_tag=C9E95_RS02220;product=bile acid:sodium symporter family protein;protein_id=WP_000765580.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 95397 96323 . + . ID=gene-C9E95_RS02225;Name=C9E95_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02225;old_locus_tag=C9E95_02270 NZ_PYJW01000032.1 Protein Homology CDS 95397 96323 . + 0 ID=cds-WP_001109831.1;Parent=gene-C9E95_RS02225;Dbxref=GenBank:WP_001109831.1;Name=WP_001109831.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461359.1;locus_tag=C9E95_RS02225;product=LysR family transcriptional regulator;protein_id=WP_001109831.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 96385 97146 . - . ID=gene-C9E95_RS02230;Name=C9E95_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02230;old_locus_tag=C9E95_02275 NZ_PYJW01000032.1 Protein Homology CDS 96385 97146 . - 0 ID=cds-WP_000722926.1;Parent=gene-C9E95_RS02230;Dbxref=GenBank:WP_000722926.1;Name=WP_000722926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461358.1;locus_tag=C9E95_RS02230;product=outer membrane protein;protein_id=WP_000722926.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 97402 98235 . + . ID=gene-C9E95_RS02235;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=C9E95_RS02235;old_locus_tag=C9E95_02280 NZ_PYJW01000032.1 Protein Homology CDS 97402 98235 . + 0 ID=cds-WP_001119760.1;Parent=gene-C9E95_RS02235;Dbxref=GenBank:WP_001119760.1;Name=WP_001119760.1;Ontology_term=GO:0055086,GO:0004731,GO:0005737;gbkey=CDS;gene=xapA;go_component=cytoplasm|0005737||IEA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing small molecule metabolic process|0055086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448816.1;locus_tag=C9E95_RS02235;product=xanthosine phosphorylase;protein_id=WP_001119760.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 98290 99546 . + . ID=gene-C9E95_RS02240;Name=C9E95_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02240;old_locus_tag=C9E95_02285 NZ_PYJW01000032.1 Protein Homology CDS 98290 99546 . + 0 ID=cds-WP_000513241.1;Parent=gene-C9E95_RS02240;Dbxref=GenBank:WP_000513241.1;Name=WP_000513241.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461356.1;locus_tag=C9E95_RS02240;product=nucleoside permease;protein_id=WP_000513241.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 99605 99763 . + . ID=gene-C9E95_RS02245;Name=C9E95_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02245;old_locus_tag=C9E95_02290 NZ_PYJW01000032.1 Protein Homology CDS 99605 99763 . + 0 ID=cds-WP_000658727.1;Parent=gene-C9E95_RS02245;Dbxref=GenBank:WP_000658727.1;Name=WP_000658727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658729.1;locus_tag=C9E95_RS02245;product=XapX domain-containing protein;protein_id=WP_000658727.1;transl_table=11 NZ_PYJW01000032.1 RefSeq gene 99815 100699 . + . ID=gene-C9E95_RS02250;Name=C9E95_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS02250;old_locus_tag=C9E95_02295 NZ_PYJW01000032.1 Protein Homology CDS 99815 100699 . + 0 ID=cds-WP_000438890.1;Parent=gene-C9E95_RS02250;Dbxref=GenBank:WP_000438890.1;Name=WP_000438890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461355.1;locus_tag=C9E95_RS02250;product=LysR family transcriptional regulator;protein_id=WP_000438890.1;transl_table=11 ##sequence-region NZ_PYJW01000173.1 1 23496 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000173.1 RefSeq region 1 23496 . + . ID=NZ_PYJW01000173.1:1..23496;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000173.1 RefSeq pseudogene 414 809 . + . ID=gene-C9E95_RS20395;Name=C9E95_RS20395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS20395;old_locus_tag=C9E95_20890;partial=true;pseudo=true;start_range=.,414 NZ_PYJW01000173.1 Protein Homology CDS 414 809 . + 0 ID=cds-C9E95_RS20395;Parent=gene-C9E95_RS20395;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009166,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015633260.1;locus_tag=C9E95_RS20395;partial=true;product=5'-nucleotidase C-terminal domain-containing protein;pseudo=true;start_range=.,414;transl_table=11 NZ_PYJW01000173.1 RefSeq pseudogene 930 1109 . - . ID=gene-C9E95_RS20400;Name=C9E95_RS20400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS20400;old_locus_tag=C9E95_20895;partial=true;pseudo=true;start_range=.,930 NZ_PYJW01000173.1 Protein Homology CDS 930 1109 . - 0 ID=cds-C9E95_RS20400;Parent=gene-C9E95_RS20400;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007726487.1;locus_tag=C9E95_RS20400;partial=true;product=arylsulfatase;pseudo=true;start_range=.,930;transl_table=11 NZ_PYJW01000173.1 RefSeq gene 1879 2328 . + . ID=gene-C9E95_RS20405;Name=C9E95_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20405;old_locus_tag=C9E95_20900 NZ_PYJW01000173.1 Protein Homology CDS 1879 2328 . + 0 ID=cds-WP_080203733.1;Parent=gene-C9E95_RS20405;Dbxref=GenBank:WP_080203733.1;Name=WP_080203733.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459034.1;locus_tag=C9E95_RS20405;product=winged helix-turn-helix domain-containing protein;protein_id=WP_080203733.1;transl_table=11 NZ_PYJW01000173.1 RefSeq gene 2428 2715 . - . ID=gene-C9E95_RS20410;Name=C9E95_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20410;old_locus_tag=C9E95_20905 NZ_PYJW01000173.1 Protein Homology CDS 2428 2715 . - 0 ID=cds-WP_000839833.1;Parent=gene-C9E95_RS20410;Dbxref=GenBank:WP_000839833.1;Name=WP_000839833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000839835.1;locus_tag=C9E95_RS20410;product=hypothetical protein;protein_id=WP_000839833.1;transl_table=11 NZ_PYJW01000173.1 RefSeq gene 2754 3599 . - . ID=gene-C9E95_RS20415;Name=C9E95_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20415;old_locus_tag=C9E95_20910 NZ_PYJW01000173.1 Protein Homology CDS 2754 3599 . - 0 ID=cds-WP_000291393.1;Parent=gene-C9E95_RS20415;Dbxref=GenBank:WP_000291393.1;Name=WP_000291393.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459033.1;locus_tag=C9E95_RS20415;product=DsbA family protein;protein_id=WP_000291393.1;transl_table=11 NZ_PYJW01000173.1 RefSeq gene 3664 4395 . - . ID=gene-C9E95_RS20420;Name=bcfG;gbkey=Gene;gene=bcfG;gene_biotype=protein_coding;locus_tag=C9E95_RS20420;old_locus_tag=C9E95_20915 NZ_PYJW01000173.1 Protein Homology CDS 3664 4395 . - 0 ID=cds-WP_001135035.1;Parent=gene-C9E95_RS20420;Dbxref=GenBank:WP_001135035.1;Name=WP_001135035.1;gbkey=CDS;gene=bcfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459032.1;locus_tag=C9E95_RS20420;product=fimbrial chaperone BcfG;protein_id=WP_001135035.1;transl_table=11 NZ_PYJW01000173.1 RefSeq gene 4361 4879 . - . ID=gene-C9E95_RS20425;Name=C9E95_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20425;old_locus_tag=C9E95_20920 NZ_PYJW01000173.1 Protein Homology CDS 4361 4879 . - 0 ID=cds-WP_001243227.1;Parent=gene-C9E95_RS20425;Dbxref=GenBank:WP_001243227.1;Name=WP_001243227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459031.1;locus_tag=C9E95_RS20425;product=fimbrial protein BcfF;protein_id=WP_001243227.1;transl_table=11 NZ_PYJW01000173.1 RefSeq gene 4895 5440 . - . ID=gene-C9E95_RS20430;Name=C9E95_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20430;old_locus_tag=C9E95_20925 NZ_PYJW01000173.1 Protein Homology CDS 4895 5440 . - 0 ID=cds-WP_001082038.1;Parent=gene-C9E95_RS20430;Dbxref=GenBank:WP_001082038.1;Name=WP_001082038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459030.1;locus_tag=C9E95_RS20430;product=fimbrial protein BcfE;protein_id=WP_001082038.1;transl_table=11 NZ_PYJW01000173.1 RefSeq gene 5441 6448 . - . ID=gene-C9E95_RS20435;Name=C9E95_RS20435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20435;old_locus_tag=C9E95_20930 NZ_PYJW01000173.1 Protein Homology CDS 5441 6448 . - 0 ID=cds-WP_080203732.1;Parent=gene-C9E95_RS20435;Dbxref=GenBank:WP_080203732.1;Name=WP_080203732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459029.1;locus_tag=C9E95_RS20435;product=fimbrial protein BcfD;protein_id=WP_080203732.1;transl_table=11 NZ_PYJW01000173.1 RefSeq gene 6449 9070 . - . ID=gene-C9E95_RS20440;Name=bcfC;gbkey=Gene;gene=bcfC;gene_biotype=protein_coding;locus_tag=C9E95_RS20440;old_locus_tag=C9E95_20935 NZ_PYJW01000173.1 Protein Homology CDS 6449 9070 . - 0 ID=cds-WP_080203731.1;Parent=gene-C9E95_RS20440;Dbxref=GenBank:WP_080203731.1;Name=WP_080203731.1;gbkey=CDS;gene=bcfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459028.1;locus_tag=C9E95_RS20440;product=fimbrial usher BcfC;protein_id=WP_080203731.1;transl_table=11 NZ_PYJW01000173.1 RefSeq gene 9075 9761 . - . ID=gene-C9E95_RS20445;Name=bcfB;gbkey=Gene;gene=bcfB;gene_biotype=protein_coding;locus_tag=C9E95_RS20445;old_locus_tag=C9E95_20940 NZ_PYJW01000173.1 Protein Homology CDS 9075 9761 . - 0 ID=cds-WP_000742551.1;Parent=gene-C9E95_RS20445;Dbxref=GenBank:WP_000742551.1;Name=WP_000742551.1;gbkey=CDS;gene=bcfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459027.1;locus_tag=C9E95_RS20445;product=fimbrial biogenesis chaperone BcfB;protein_id=WP_000742551.1;transl_table=11 NZ_PYJW01000173.1 RefSeq gene 9862 10404 . - . ID=gene-C9E95_RS20450;Name=C9E95_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20450;old_locus_tag=C9E95_20945 NZ_PYJW01000173.1 Protein Homology CDS 9862 10404 . - 0 ID=cds-WP_000743357.1;Parent=gene-C9E95_RS20450;Dbxref=GenBank:WP_000743357.1;Name=WP_000743357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459026.1;locus_tag=C9E95_RS20450;product=fimbrial protein BcfA;protein_id=WP_000743357.1;transl_table=11 NZ_PYJW01000173.1 RefSeq gene 10834 11538 . - . ID=gene-C9E95_RS20455;Name=C9E95_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20455;old_locus_tag=C9E95_20950 NZ_PYJW01000173.1 Protein Homology CDS 10834 11538 . - 0 ID=cds-WP_000738617.1;Parent=gene-C9E95_RS20455;Dbxref=GenBank:WP_000738617.1;Name=WP_000738617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459025.1;locus_tag=C9E95_RS20455;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000738617.1;transl_table=11 NZ_PYJW01000173.1 RefSeq gene 11819 14815 . - . ID=gene-C9E95_RS20460;Name=C9E95_RS20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20460;old_locus_tag=C9E95_20955 NZ_PYJW01000173.1 Protein Homology CDS 11819 14815 . - 0 ID=cds-WP_080203730.1;Parent=gene-C9E95_RS20460;Dbxref=GenBank:WP_080203730.1;Name=WP_080203730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459024.1;locus_tag=C9E95_RS20460;product=chitinase;protein_id=WP_080203730.1;transl_table=11 NZ_PYJW01000173.1 RefSeq gene 14908 17007 . - . ID=gene-C9E95_RS20465;Name=C9E95_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20465;old_locus_tag=C9E95_20960 NZ_PYJW01000173.1 Protein Homology CDS 14908 17007 . - 0 ID=cds-WP_000235797.1;Parent=gene-C9E95_RS20465;Dbxref=GenBank:WP_000235797.1;Name=WP_000235797.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459023.1;locus_tag=C9E95_RS20465;product=glycosyl hydrolase family 18 protein;protein_id=WP_000235797.1;transl_table=11 NZ_PYJW01000173.1 RefSeq gene 17388 17831 . + . ID=gene-C9E95_RS20470;Name=C9E95_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20470;old_locus_tag=C9E95_20965 NZ_PYJW01000173.1 Protein Homology CDS 17388 17831 . + 0 ID=cds-WP_000860681.1;Parent=gene-C9E95_RS20470;Dbxref=GenBank:WP_000860681.1;Name=WP_000860681.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459022.1;locus_tag=C9E95_RS20470;product=winged helix-turn-helix domain-containing protein;protein_id=WP_000860681.1;transl_table=11 NZ_PYJW01000173.1 RefSeq gene 17848 18381 . + . ID=gene-C9E95_RS20475;Name=C9E95_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20475;old_locus_tag=C9E95_20970 NZ_PYJW01000173.1 Protein Homology CDS 17848 18381 . + 0 ID=cds-WP_080203729.1;Parent=gene-C9E95_RS20475;Dbxref=GenBank:WP_080203729.1;Name=WP_080203729.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459021.1;locus_tag=C9E95_RS20475;product=glycoside hydrolase family 108 protein;protein_id=WP_080203729.1;transl_table=11 NZ_PYJW01000173.1 RefSeq gene 18442 18786 . - . ID=gene-C9E95_RS20480;Name=C9E95_RS20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20480;old_locus_tag=C9E95_20975 NZ_PYJW01000173.1 Protein Homology CDS 18442 18786 . - 0 ID=cds-WP_000026889.1;Parent=gene-C9E95_RS20480;Dbxref=GenBank:WP_000026889.1;Name=WP_000026889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459020.1;locus_tag=C9E95_RS20480;product=phage holin family protein;protein_id=WP_000026889.1;transl_table=11 NZ_PYJW01000173.1 RefSeq gene 18913 19860 . - . ID=gene-C9E95_RS20485;Name=C9E95_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS20485;old_locus_tag=C9E95_20980 NZ_PYJW01000173.1 Protein Homology CDS 18913 19860 . - 0 ID=cds-WP_023232157.1;Parent=gene-C9E95_RS20485;Dbxref=GenBank:WP_023232157.1;Name=WP_023232157.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459019.1;locus_tag=C9E95_RS20485;product=LysR family transcriptional regulator;protein_id=WP_023232157.1;transl_table=11 NZ_PYJW01000173.1 RefSeq gene 20141 21280 . - . ID=gene-C9E95_RS20490;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=C9E95_RS20490;old_locus_tag=C9E95_20985 NZ_PYJW01000173.1 Protein Homology CDS 20141 21280 . - 0 ID=cds-WP_001119009.1;Parent=gene-C9E95_RS20490;Dbxref=GenBank:WP_001119009.1;Name=WP_001119009.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459018.1;locus_tag=C9E95_RS20490;product=molecular chaperone DnaJ;protein_id=WP_001119009.1;transl_table=11 NZ_PYJW01000173.1 RefSeq gene 21366 23282 . - . ID=gene-C9E95_RS20495;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=C9E95_RS20495;old_locus_tag=C9E95_20990 NZ_PYJW01000173.1 Protein Homology CDS 21366 23282 . - 0 ID=cds-WP_000516126.1;Parent=gene-C9E95_RS20495;Dbxref=GenBank:WP_000516126.1;Name=WP_000516126.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=C9E95_RS20495;product=molecular chaperone DnaK;protein_id=WP_000516126.1;transl_table=11 ##sequence-region NZ_PYJW01000150.1 1 490 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000150.1 RefSeq region 1 490 . + . ID=NZ_PYJW01000150.1:1..490;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica ##sequence-region NZ_PYJW01000108.1 1 22339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000108.1 RefSeq region 1 22339 . + . ID=NZ_PYJW01000108.1:1..22339;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000108.1 RefSeq gene 219 1022 . + . ID=gene-C9E95_RS11430;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=C9E95_RS11430;old_locus_tag=C9E95_11725 NZ_PYJW01000108.1 Protein Homology CDS 219 1022 . + 0 ID=cds-WP_000154871.1;Parent=gene-C9E95_RS11430;Dbxref=GenBank:WP_000154871.1;Name=WP_000154871.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459253.1;locus_tag=C9E95_RS11430;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_000154871.1;transl_table=11 NZ_PYJW01000108.1 RefSeq gene 1043 1957 . - . ID=gene-C9E95_RS11435;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=C9E95_RS11435;old_locus_tag=C9E95_11730 NZ_PYJW01000108.1 Protein Homology CDS 1043 1957 . - 0 ID=cds-WP_000648534.1;Parent=gene-C9E95_RS11435;Dbxref=GenBank:WP_000648534.1;Name=WP_000648534.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459254.1;locus_tag=C9E95_RS11435;product=DNA-binding transcriptional regulator YafC;protein_id=WP_000648534.1;transl_table=11 NZ_PYJW01000108.1 RefSeq gene 2062 3237 . + . ID=gene-C9E95_RS11440;Name=C9E95_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11440;old_locus_tag=C9E95_11735 NZ_PYJW01000108.1 Protein Homology CDS 2062 3237 . + 0 ID=cds-WP_080204088.1;Parent=gene-C9E95_RS11440;Dbxref=GenBank:WP_080204088.1;Name=WP_080204088.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459255.1;locus_tag=C9E95_RS11440;product=MFS transporter;protein_id=WP_080204088.1;transl_table=11 NZ_PYJW01000108.1 RefSeq gene 3369 4169 . + . ID=gene-C9E95_RS11445;Name=C9E95_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11445;old_locus_tag=C9E95_11740 NZ_PYJW01000108.1 Protein Homology CDS 3369 4169 . + 0 ID=cds-WP_001230970.1;Parent=gene-C9E95_RS11445;Dbxref=GenBank:WP_001230970.1;Name=WP_001230970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=C9E95_RS11445;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001230970.1;transl_table=11 NZ_PYJW01000108.1 RefSeq gene 4247 5017 . + . ID=gene-C9E95_RS11450;Name=C9E95_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11450;old_locus_tag=C9E95_11745 NZ_PYJW01000108.1 Protein Homology CDS 4247 5017 . + 0 ID=cds-WP_000207241.1;Parent=gene-C9E95_RS11450;Dbxref=GenBank:WP_000207241.1;Name=WP_000207241.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459257.1;locus_tag=C9E95_RS11450;product=class I SAM-dependent methyltransferase;protein_id=WP_000207241.1;transl_table=11 NZ_PYJW01000108.1 RefSeq gene 5073 6440 . - . ID=gene-C9E95_RS11455;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=C9E95_RS11455;old_locus_tag=C9E95_11750 NZ_PYJW01000108.1 Protein Homology CDS 5073 6440 . - 0 ID=cds-WP_000644706.1;Parent=gene-C9E95_RS11455;Dbxref=GenBank:WP_000644706.1;Name=WP_000644706.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459258.1;locus_tag=C9E95_RS11455;product=murein transglycosylase D;protein_id=WP_000644706.1;transl_table=11 NZ_PYJW01000108.1 RefSeq gene 6512 7267 . - . ID=gene-C9E95_RS11460;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=C9E95_RS11460;old_locus_tag=C9E95_11755 NZ_PYJW01000108.1 Protein Homology CDS 6512 7267 . - 0 ID=cds-WP_001052773.1;Parent=gene-C9E95_RS11460;Dbxref=GenBank:WP_001052773.1;Name=WP_001052773.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459259.1;locus_tag=C9E95_RS11460;product=hydroxyacylglutathione hydrolase;protein_id=WP_001052773.1;transl_table=11 NZ_PYJW01000108.1 RefSeq gene 7302 8024 . + . ID=gene-C9E95_RS11465;Name=C9E95_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11465;old_locus_tag=C9E95_11760 NZ_PYJW01000108.1 Protein Homology CDS 7302 8024 . + 0 ID=cds-WP_000801238.1;Parent=gene-C9E95_RS11465;Dbxref=GenBank:WP_000801238.1;Name=WP_000801238.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459260.1;locus_tag=C9E95_RS11465;product=class I SAM-dependent methyltransferase;protein_id=WP_000801238.1;transl_table=11 NZ_PYJW01000108.1 RefSeq gene 8021 8488 . - . ID=gene-C9E95_RS11470;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=C9E95_RS11470;old_locus_tag=C9E95_11765 NZ_PYJW01000108.1 Protein Homology CDS 8021 8488 . - 0 ID=cds-WP_000917872.1;Parent=gene-C9E95_RS11470;Dbxref=GenBank:WP_000917872.1;Name=WP_000917872.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459261.1;locus_tag=C9E95_RS11470;product=ribonuclease HI;protein_id=WP_000917872.1;transl_table=11 NZ_PYJW01000108.1 RefSeq gene 8552 9283 . + . ID=gene-C9E95_RS11475;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=C9E95_RS11475;old_locus_tag=C9E95_11770 NZ_PYJW01000108.1 Protein Homology CDS 8552 9283 . + 0 ID=cds-WP_001670675.1;Parent=gene-C9E95_RS11475;Dbxref=GenBank:WP_001670675.1;Name=WP_001670675.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459262.1;locus_tag=C9E95_RS11475;product=DNA polymerase III subunit epsilon;protein_id=WP_001670675.1;transl_table=11 NZ_PYJW01000108.1 RefSeq gene 9417 9493 . + . ID=gene-C9E95_RS11480;Name=C9E95_RS11480;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS11480;old_locus_tag=C9E95_11775 NZ_PYJW01000108.1 tRNAscan-SE tRNA 9417 9493 . + . ID=rna-C9E95_RS11480;Parent=gene-C9E95_RS11480;anticodon=(pos:9451..9453);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS11480;product=tRNA-Asp NZ_PYJW01000108.1 tRNAscan-SE exon 9417 9493 . + . ID=exon-C9E95_RS11480-1;Parent=rna-C9E95_RS11480;anticodon=(pos:9451..9453);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS11480;product=tRNA-Asp NZ_PYJW01000108.1 RefSeq gene 9813 10868 . - . ID=gene-C9E95_RS11485;Name=C9E95_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11485;old_locus_tag=C9E95_11780 NZ_PYJW01000108.1 Protein Homology CDS 9813 10868 . - 0 ID=cds-WP_000367619.1;Parent=gene-C9E95_RS11485;Dbxref=GenBank:WP_000367619.1;Name=WP_000367619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459263.1;locus_tag=C9E95_RS11485;product=ImpA family type VI secretion system protein;protein_id=WP_000367619.1;transl_table=11 NZ_PYJW01000108.1 RefSeq gene 10879 11874 . - . ID=gene-C9E95_RS11490;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=C9E95_RS11490;old_locus_tag=C9E95_11785 NZ_PYJW01000108.1 Protein Homology CDS 10879 11874 . - 0 ID=cds-WP_000145239.1;Parent=gene-C9E95_RS11490;Dbxref=GenBank:WP_000145239.1;Name=WP_000145239.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459264.1;locus_tag=C9E95_RS11490;product=type VI secretion system baseplate subunit TssG;protein_id=WP_000145239.1;transl_table=11 NZ_PYJW01000108.1 RefSeq gene 11871 13754 . - . ID=gene-C9E95_RS11495;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=C9E95_RS11495;old_locus_tag=C9E95_11790 NZ_PYJW01000108.1 Protein Homology CDS 11871 13754 . - 0 ID=cds-WP_023238769.1;Parent=gene-C9E95_RS11495;Dbxref=GenBank:WP_023238769.1;Name=WP_023238769.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459265.1;locus_tag=C9E95_RS11495;product=type VI secretion system baseplate subunit TssF;protein_id=WP_023238769.1;transl_table=11 NZ_PYJW01000108.1 RefSeq gene 13770 14264 . - . ID=gene-C9E95_RS11500;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=C9E95_RS11500;old_locus_tag=C9E95_11795 NZ_PYJW01000108.1 Protein Homology CDS 13770 14264 . - 0 ID=cds-WP_000108007.1;Parent=gene-C9E95_RS11500;Dbxref=GenBank:WP_000108007.1;Name=WP_000108007.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459266.1;locus_tag=C9E95_RS11500;product=type VI secretion system baseplate subunit TssE;protein_id=WP_000108007.1;transl_table=11 NZ_PYJW01000108.1 RefSeq gene 14261 15085 . - . ID=gene-C9E95_RS11505;Name=C9E95_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11505;old_locus_tag=C9E95_11800 NZ_PYJW01000108.1 Protein Homology CDS 14261 15085 . - 0 ID=cds-WP_023994005.1;Parent=gene-C9E95_RS11505;Dbxref=GenBank:WP_023994005.1;Name=WP_023994005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459267.1;locus_tag=C9E95_RS11505;product=type VI secretion system accessory protein TagJ;protein_id=WP_023994005.1;transl_table=11 NZ_PYJW01000108.1 RefSeq gene 15072 15974 . - . ID=gene-C9E95_RS11510;Name=tagK;gbkey=Gene;gene=tagK;gene_biotype=protein_coding;locus_tag=C9E95_RS11510;old_locus_tag=C9E95_11805 NZ_PYJW01000108.1 Protein Homology CDS 15072 15974 . - 0 ID=cds-WP_000806688.1;Parent=gene-C9E95_RS11510;Dbxref=GenBank:WP_000806688.1;Name=WP_000806688.1;gbkey=CDS;gene=tagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459268.1;locus_tag=C9E95_RS11510;product=type VI secretion system-associated protein TagK;protein_id=WP_000806688.1;transl_table=11 NZ_PYJW01000108.1 RefSeq gene 16342 18981 . + . ID=gene-C9E95_RS11515;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=C9E95_RS11515;old_locus_tag=C9E95_11810 NZ_PYJW01000108.1 Protein Homology CDS 16342 18981 . + 0 ID=cds-WP_023223892.1;Parent=gene-C9E95_RS11515;Dbxref=GenBank:WP_023223892.1;Name=WP_023223892.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459269.1;locus_tag=C9E95_RS11515;product=type VI secretion system ATPase TssH;protein_id=WP_023223892.1;transl_table=11 NZ_PYJW01000108.1 RefSeq gene 19081 19623 . + . ID=gene-C9E95_RS11520;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=C9E95_RS11520;old_locus_tag=C9E95_11815 NZ_PYJW01000108.1 Protein Homology CDS 19081 19623 . + 0 ID=cds-WP_000996817.1;Parent=gene-C9E95_RS11520;Dbxref=GenBank:WP_000996817.1;Name=WP_000996817.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459270.1;locus_tag=C9E95_RS11520;product=type VI secretion system contractile sheath small subunit;protein_id=WP_000996817.1;transl_table=11 NZ_PYJW01000108.1 RefSeq gene 19647 21155 . + . ID=gene-C9E95_RS11525;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=C9E95_RS11525;old_locus_tag=C9E95_11820 NZ_PYJW01000108.1 Protein Homology CDS 19647 21155 . + 0 ID=cds-WP_000013881.1;Parent=gene-C9E95_RS11525;Dbxref=GenBank:WP_000013881.1;Name=WP_000013881.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459271.1;locus_tag=C9E95_RS11525;product=type VI secretion system contractile sheath large subunit;protein_id=WP_000013881.1;transl_table=11 NZ_PYJW01000108.1 RefSeq gene 21208 21609 . + . ID=gene-C9E95_RS11530;Name=C9E95_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11530;old_locus_tag=C9E95_11825 NZ_PYJW01000108.1 Protein Homology CDS 21208 21609 . + 0 ID=cds-WP_001147173.1;Parent=gene-C9E95_RS11530;Dbxref=GenBank:WP_001147173.1;Name=WP_001147173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001147173.1;locus_tag=C9E95_RS11530;product=BPSL0067 family protein;protein_id=WP_001147173.1;transl_table=11 NZ_PYJW01000108.1 RefSeq gene 21581 22006 . + . ID=gene-C9E95_RS11535;Name=C9E95_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11535;old_locus_tag=C9E95_11830 NZ_PYJW01000108.1 Protein Homology CDS 21581 22006 . + 0 ID=cds-WP_001171576.1;Parent=gene-C9E95_RS11535;Dbxref=GenBank:WP_001171576.1;Name=WP_001171576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001171576.1;locus_tag=C9E95_RS11535;product=STY0301 family protein;protein_id=WP_001171576.1;transl_table=11 NZ_PYJW01000108.1 RefSeq gene 22243 22339 . + . ID=gene-C9E95_RS11540;Name=C9E95_RS11540;end_range=22339,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11540;old_locus_tag=C9E95_11835;partial=true NZ_PYJW01000108.1 Protein Homology CDS 22243 22339 . + 0 ID=cds-WP_001753060.1;Parent=gene-C9E95_RS11540;Dbxref=GenBank:WP_001753060.1;Name=WP_001753060.1;end_range=22339,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459274.1;locus_tag=C9E95_RS11540;partial=true;product=type VI secretion system tube protein Hcp;protein_id=WP_001753060.1;transl_table=11 ##sequence-region NZ_PYJW01000047.1 1 21368 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000047.1 RefSeq region 1 21368 . + . ID=NZ_PYJW01000047.1:1..21368;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000047.1 RefSeq gene 31 1218 . + . ID=gene-C9E95_RS03565;Name=C9E95_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03565;old_locus_tag=C9E95_03645 NZ_PYJW01000047.1 Protein Homology CDS 31 1218 . + 0 ID=cds-WP_001066975.1;Parent=gene-C9E95_RS03565;Dbxref=GenBank:WP_001066975.1;Name=WP_001066975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463334.1;locus_tag=C9E95_RS03565;product=YjgN family protein;protein_id=WP_001066975.1;transl_table=11 NZ_PYJW01000047.1 RefSeq gene 1360 4215 . - . ID=gene-C9E95_RS03570;Name=C9E95_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03570;old_locus_tag=C9E95_03650 NZ_PYJW01000047.1 Protein Homology CDS 1360 4215 . - 0 ID=cds-WP_023236878.1;Parent=gene-C9E95_RS03570;Dbxref=GenBank:WP_023236878.1;Name=WP_023236878.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=C9E95_RS03570;product=valine--tRNA ligase;protein_id=WP_023236878.1;transl_table=11 NZ_PYJW01000047.1 RefSeq gene 4215 4658 . - . ID=gene-C9E95_RS03575;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=C9E95_RS03575;old_locus_tag=C9E95_03655 NZ_PYJW01000047.1 Protein Homology CDS 4215 4658 . - 0 ID=cds-WP_001523689.1;Parent=gene-C9E95_RS03575;Dbxref=GenBank:WP_001523689.1;Name=WP_001523689.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=C9E95_RS03575;product=DNA polymerase III subunit chi;protein_id=WP_001523689.1;transl_table=11 NZ_PYJW01000047.1 RefSeq gene 4795 6306 . - . ID=gene-C9E95_RS03580;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=C9E95_RS03580;old_locus_tag=C9E95_03660 NZ_PYJW01000047.1 Protein Homology CDS 4795 6306 . - 0 ID=cds-WP_000397158.1;Parent=gene-C9E95_RS03580;Dbxref=GenBank:WP_000397158.1;Name=WP_000397158.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463337.1;locus_tag=C9E95_RS03580;product=leucyl aminopeptidase;protein_id=WP_000397158.1;transl_table=11 NZ_PYJW01000047.1 RefSeq gene 6587 6637 . + . ID=gene-C9E95_RS23405;Name=C9E95_RS23405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23405 NZ_PYJW01000047.1 Protein Homology CDS 6587 6637 . + 0 ID=cds-WP_212724070.1;Parent=gene-C9E95_RS23405;Dbxref=GenBank:WP_212724070.1;Name=WP_212724070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=C9E95_RS23405;product=hypothetical protein;protein_id=WP_212724070.1;transl_table=11 NZ_PYJW01000047.1 RefSeq gene 6701 7801 . + . ID=gene-C9E95_RS03590;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=C9E95_RS03590;old_locus_tag=C9E95_03675 NZ_PYJW01000047.1 Protein Homology CDS 6701 7801 . + 0 ID=cds-WP_000584132.1;Parent=gene-C9E95_RS03590;Dbxref=GenBank:WP_000584132.1;Name=WP_000584132.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463339.1;locus_tag=C9E95_RS03590;product=LPS export ABC transporter permease LptF;protein_id=WP_000584132.1;transl_table=11 NZ_PYJW01000047.1 RefSeq gene 7801 8883 . + . ID=gene-C9E95_RS03595;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=C9E95_RS03595;old_locus_tag=C9E95_03680 NZ_PYJW01000047.1 Protein Homology CDS 7801 8883 . + 0 ID=cds-WP_001182242.1;Parent=gene-C9E95_RS03595;Dbxref=GenBank:WP_001182242.1;Name=WP_001182242.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463340.1;locus_tag=C9E95_RS03595;product=LPS export ABC transporter permease LptG;protein_id=WP_001182242.1;transl_table=11 NZ_PYJW01000047.1 RefSeq gene 9079 10077 . - . ID=gene-C9E95_RS03600;Name=idnR;gbkey=Gene;gene=idnR;gene_biotype=protein_coding;gene_synonym=gntH,yjgS;locus_tag=C9E95_RS03600;old_locus_tag=C9E95_03685 NZ_PYJW01000047.1 Protein Homology CDS 9079 10077 . - 0 ID=cds-WP_001244065.1;Parent=gene-C9E95_RS03600;Dbxref=GenBank:WP_001244065.1;Name=WP_001244065.1;Ontology_term=GO:0006355,GO:0019521,GO:0003700;gbkey=CDS;gene=idnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463341.1;locus_tag=C9E95_RS03600;product=DNA-binding transcriptional regulator IdnR;protein_id=WP_001244065.1;transl_table=11 NZ_PYJW01000047.1 RefSeq gene 10141 11460 . - . ID=gene-C9E95_RS03605;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=protein_coding;locus_tag=C9E95_RS03605;old_locus_tag=C9E95_03690 NZ_PYJW01000047.1 Protein Homology CDS 10141 11460 . - 0 ID=cds-WP_023993568.1;Parent=gene-C9E95_RS03605;Dbxref=GenBank:WP_023993568.1;Name=WP_023993568.1;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=C9E95_RS03605;product=gnt-II system L-idonate transporter;protein_id=WP_023993568.1;transl_table=11 NZ_PYJW01000047.1 RefSeq gene 11522 12286 . - . ID=gene-C9E95_RS03610;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=C9E95_RS03610;old_locus_tag=C9E95_03695 NZ_PYJW01000047.1 Protein Homology CDS 11522 12286 . - 0 ID=cds-WP_023993567.1;Parent=gene-C9E95_RS03610;Dbxref=GenBank:WP_023993567.1;Name=WP_023993567.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463343.1;locus_tag=C9E95_RS03610;product=gluconate 5-dehydrogenase;protein_id=WP_023993567.1;transl_table=11 NZ_PYJW01000047.1 RefSeq gene 12311 13342 . - . ID=gene-C9E95_RS03615;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=C9E95_RS03615;old_locus_tag=C9E95_03700 NZ_PYJW01000047.1 Protein Homology CDS 12311 13342 . - 0 ID=cds-WP_000453354.1;Parent=gene-C9E95_RS03615;Dbxref=GenBank:WP_000453354.1;Name=WP_000453354.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463344.1;locus_tag=C9E95_RS03615;product=L-idonate 5-dehydrogenase;protein_id=WP_000453354.1;transl_table=11 NZ_PYJW01000047.1 RefSeq gene 13559 14089 . + . ID=gene-C9E95_RS03620;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=C9E95_RS03620;old_locus_tag=C9E95_03705 NZ_PYJW01000047.1 Protein Homology CDS 13559 14089 . + 0 ID=cds-WP_000896756.1;Parent=gene-C9E95_RS03620;Dbxref=GenBank:WP_000896756.1;Name=WP_000896756.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463345.1;locus_tag=C9E95_RS03620;product=gluconokinase;protein_id=WP_000896756.1;transl_table=11 NZ_PYJW01000047.1 RefSeq gene 14117 15136 . - . ID=gene-C9E95_RS03625;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=C9E95_RS03625;old_locus_tag=C9E95_03710 NZ_PYJW01000047.1 Protein Homology CDS 14117 15136 . - 0 ID=cds-WP_080203716.1;Parent=gene-C9E95_RS03625;Dbxref=GenBank:WP_080203716.1;Name=WP_080203716.1;Ontology_term=GO:0006631,GO:0008106,GO:0016616;gbkey=CDS;gene=ahr;go_function=alcohol dehydrogenase (NADP+) activity|0008106||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463346.1;locus_tag=C9E95_RS03625;product=NADPH-dependent aldehyde reductase Ahr;protein_id=WP_080203716.1;transl_table=11 NZ_PYJW01000047.1 RefSeq gene 15359 15443 . + . ID=gene-C9E95_RS03630;Name=C9E95_RS03630;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS03630;old_locus_tag=C9E95_03715 NZ_PYJW01000047.1 tRNAscan-SE tRNA 15359 15443 . + . ID=rna-C9E95_RS03630;Parent=gene-C9E95_RS03630;anticodon=(pos:15393..15395);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS03630;product=tRNA-Leu NZ_PYJW01000047.1 tRNAscan-SE exon 15359 15443 . + . ID=exon-C9E95_RS03630-1;Parent=rna-C9E95_RS03630;anticodon=(pos:15393..15395);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS03630;product=tRNA-Leu NZ_PYJW01000047.1 RefSeq pseudogene 15631 16880 . + . ID=gene-C9E95_RS03635;Name=C9E95_RS03635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS03635;old_locus_tag=C9E95_03720;pseudo=true NZ_PYJW01000047.1 Protein Homology CDS 15631 16880 . + 0 ID=cds-C9E95_RS03635;Parent=gene-C9E95_RS03635;Note=frameshifted;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200777.1;locus_tag=C9E95_RS03635;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_PYJW01000047.1 RefSeq gene 16976 17668 . + . ID=gene-C9E95_RS03640;Name=C9E95_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03640;old_locus_tag=C9E95_03725 NZ_PYJW01000047.1 Protein Homology CDS 16976 17668 . + 0 ID=cds-WP_023214691.1;Parent=gene-C9E95_RS03640;Dbxref=GenBank:WP_023214691.1;Name=WP_023214691.1;Ontology_term=GO:0009307,GO:0003677,GO:0009036;gbkey=CDS;go_function=DNA binding|0003677||IEA,type II site-specific deoxyribonuclease activity|0009036||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_023214691.1;locus_tag=C9E95_RS03640;product=SinI family restriction endonuclease;protein_id=WP_023214691.1;transl_table=11 NZ_PYJW01000047.1 RefSeq gene 17700 19079 . - . ID=gene-C9E95_RS03645;Name=C9E95_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03645;old_locus_tag=C9E95_03730 NZ_PYJW01000047.1 Protein Homology CDS 17700 19079 . - 0 ID=cds-WP_001581717.1;Parent=gene-C9E95_RS03645;Dbxref=GenBank:WP_001581717.1;Name=WP_001581717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_023262291.1;locus_tag=C9E95_RS03645;product=DNA cytosine methyltransferase;protein_id=WP_001581717.1;transl_table=11 NZ_PYJW01000047.1 RefSeq pseudogene 19281 20379 . + . ID=gene-C9E95_RS03650;Name=C9E95_RS03650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS03650;old_locus_tag=C9E95_03740;pseudo=true NZ_PYJW01000047.1 Protein Homology CDS 19281 20379 . + 0 ID=cds-C9E95_RS03650;Parent=gene-C9E95_RS03650;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611505.1;locus_tag=C9E95_RS03650;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_PYJW01000047.1 RefSeq gene 20576 21292 . - . ID=gene-C9E95_RS03660;Name=C9E95_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03660;old_locus_tag=C9E95_03750 NZ_PYJW01000047.1 Protein Homology CDS 20576 21292 . - 0 ID=cds-WP_000532939.1;Parent=gene-C9E95_RS03660;Dbxref=GenBank:WP_000532939.1;Name=WP_000532939.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416490.1;locus_tag=C9E95_RS03660;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000532939.1;transl_table=11 ##sequence-region NZ_PYJW01000019.1 1 21158 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000019.1 RefSeq region 1 21158 . + . ID=NZ_PYJW01000019.1:1..21158;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000019.1 RefSeq gene 338 778 . + . ID=gene-C9E95_RS01080;Name=C9E95_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01080;old_locus_tag=C9E95_01095 NZ_PYJW01000019.1 Protein Homology CDS 338 778 . + 0 ID=cds-WP_000901960.1;Parent=gene-C9E95_RS01080;Dbxref=GenBank:WP_000901960.1;Name=WP_000901960.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459183.1;locus_tag=C9E95_RS01080;product=PTS sugar transporter subunit IIA;protein_id=WP_000901960.1;transl_table=11 NZ_PYJW01000019.1 RefSeq gene 840 2069 . + . ID=gene-C9E95_RS01085;Name=C9E95_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01085;old_locus_tag=C9E95_01100 NZ_PYJW01000019.1 Protein Homology CDS 840 2069 . + 0 ID=cds-WP_000245316.1;Parent=gene-C9E95_RS01085;Dbxref=GenBank:WP_000245316.1;Name=WP_000245316.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459184.1;locus_tag=C9E95_RS01085;product=polysaccharide deacetylase family protein;protein_id=WP_000245316.1;transl_table=11 NZ_PYJW01000019.1 RefSeq gene 2076 2456 . - . ID=gene-C9E95_RS01090;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=C9E95_RS01090;old_locus_tag=C9E95_01105 NZ_PYJW01000019.1 Protein Homology CDS 2076 2456 . - 0 ID=cds-WP_080203748.1;Parent=gene-C9E95_RS01090;Dbxref=GenBank:WP_080203748.1;Name=WP_080203748.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=C9E95_RS01090;product=aspartate 1-decarboxylase;protein_id=WP_080203748.1;transl_table=11 NZ_PYJW01000019.1 RefSeq gene 2551 3405 . - . ID=gene-C9E95_RS01095;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=C9E95_RS01095;old_locus_tag=C9E95_01110 NZ_PYJW01000019.1 Protein Homology CDS 2551 3405 . - 0 ID=cds-WP_080203747.1;Parent=gene-C9E95_RS01095;Dbxref=GenBank:WP_080203747.1;Name=WP_080203747.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459186.1;locus_tag=C9E95_RS01095;product=pantoate--beta-alanine ligase;protein_id=WP_080203747.1;transl_table=11 NZ_PYJW01000019.1 RefSeq gene 3531 4322 . - . ID=gene-C9E95_RS01100;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=C9E95_RS01100;old_locus_tag=C9E95_01115 NZ_PYJW01000019.1 Protein Homology CDS 3531 4322 . - 0 ID=cds-WP_080203746.1;Parent=gene-C9E95_RS01100;Dbxref=GenBank:WP_080203746.1;Name=WP_080203746.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=C9E95_RS01100;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_080203746.1;transl_table=11 NZ_PYJW01000019.1 RefSeq gene 4443 4922 . - . ID=gene-C9E95_RS01105;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=C9E95_RS01105;old_locus_tag=C9E95_01120 NZ_PYJW01000019.1 Protein Homology CDS 4443 4922 . - 0 ID=cds-WP_080203745.1;Parent=gene-C9E95_RS01105;Dbxref=GenBank:WP_080203745.1;Name=WP_080203745.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459188.1;locus_tag=C9E95_RS01105;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_080203745.1;transl_table=11 NZ_PYJW01000019.1 RefSeq gene 4919 6316 . - . ID=gene-C9E95_RS01110;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=C9E95_RS01110;old_locus_tag=C9E95_01125 NZ_PYJW01000019.1 Protein Homology CDS 4919 6316 . - 0 ID=cds-WP_125540466.1;Parent=gene-C9E95_RS01110;Dbxref=GenBank:WP_125540466.1;Name=WP_125540466.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=C9E95_RS01110;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_125540466.1;transl_table=11 NZ_PYJW01000019.1 RefSeq gene 6478 7374 . - . ID=gene-C9E95_RS01115;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=C9E95_RS01115;old_locus_tag=C9E95_01130 NZ_PYJW01000019.1 Protein Homology CDS 6478 7374 . - 0 ID=cds-WP_080203762.1;Parent=gene-C9E95_RS01115;Dbxref=GenBank:WP_080203762.1;Name=WP_080203762.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549989.1;locus_tag=C9E95_RS01115;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_080203762.1;transl_table=11 NZ_PYJW01000019.1 RefSeq gene 7443 7898 . - . ID=gene-C9E95_RS01120;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=C9E95_RS01120;old_locus_tag=C9E95_01135 NZ_PYJW01000019.1 Protein Homology CDS 7443 7898 . - 0 ID=cds-WP_001155232.1;Parent=gene-C9E95_RS01120;Dbxref=GenBank:WP_001155232.1;Name=WP_001155232.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=C9E95_RS01120;product=RNA polymerase-binding protein DksA;protein_id=WP_001155232.1;transl_table=11 NZ_PYJW01000019.1 RefSeq gene 8075 8779 . - . ID=gene-C9E95_RS01125;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=C9E95_RS01125;old_locus_tag=C9E95_01140 NZ_PYJW01000019.1 Protein Homology CDS 8075 8779 . - 0 ID=cds-WP_000899412.1;Parent=gene-C9E95_RS01125;Dbxref=GenBank:WP_000899412.1;Name=WP_000899412.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459192.1;locus_tag=C9E95_RS01125;product=DNA/RNA nuclease SfsA;protein_id=WP_000899412.1;transl_table=11 NZ_PYJW01000019.1 RefSeq gene 8796 9326 . - . ID=gene-C9E95_RS01130;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=C9E95_RS01130;old_locus_tag=C9E95_01145 NZ_PYJW01000019.1 Protein Homology CDS 8796 9326 . - 0 ID=cds-WP_023239695.1;Parent=gene-C9E95_RS01130;Dbxref=GenBank:WP_023239695.1;Name=WP_023239695.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459193.1;locus_tag=C9E95_RS01130;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_023239695.1;transl_table=11 NZ_PYJW01000019.1 RefSeq gene 9399 11828 . + . ID=gene-C9E95_RS01135;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=C9E95_RS01135;old_locus_tag=C9E95_01150 NZ_PYJW01000019.1 Protein Homology CDS 9399 11828 . + 0 ID=cds-WP_165450960.1;Parent=gene-C9E95_RS01135;Dbxref=GenBank:WP_165450960.1;Name=WP_165450960.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308179.2;locus_tag=C9E95_RS01135;product=ATP-dependent helicase HrpB;protein_id=WP_165450960.1;transl_table=11 NZ_PYJW01000019.1 RefSeq gene 11969 14491 . + . ID=gene-C9E95_RS01140;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=C9E95_RS01140;old_locus_tag=C9E95_01155 NZ_PYJW01000019.1 Protein Homology CDS 11969 14491 . + 0 ID=cds-WP_080203743.1;Parent=gene-C9E95_RS01140;Dbxref=GenBank:WP_080203743.1;Name=WP_080203743.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459195.1;locus_tag=C9E95_RS01140;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_080203743.1;transl_table=11 NZ_PYJW01000019.1 RefSeq gene 14784 16973 . + . ID=gene-C9E95_RS01145;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=C9E95_RS01145;old_locus_tag=C9E95_01160 NZ_PYJW01000019.1 Protein Homology CDS 14784 16973 . + 0 ID=cds-WP_079821180.1;Parent=gene-C9E95_RS01145;Dbxref=GenBank:WP_079821180.1;Name=WP_079821180.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459196.1;locus_tag=C9E95_RS01145;product=ferrichrome porin FhuA;protein_id=WP_079821180.1;transl_table=11 NZ_PYJW01000019.1 RefSeq gene 17022 17819 . + . ID=gene-C9E95_RS01150;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=C9E95_RS01150;old_locus_tag=C9E95_01165 NZ_PYJW01000019.1 Protein Homology CDS 17022 17819 . + 0 ID=cds-WP_001157198.1;Parent=gene-C9E95_RS01150;Dbxref=GenBank:WP_001157198.1;Name=WP_001157198.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459197.1;locus_tag=C9E95_RS01150;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_001157198.1;transl_table=11 NZ_PYJW01000019.1 RefSeq gene 17819 18709 . + . ID=gene-C9E95_RS01155;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=C9E95_RS01155;old_locus_tag=C9E95_01170 NZ_PYJW01000019.1 Protein Homology CDS 17819 18709 . + 0 ID=cds-WP_079968219.1;Parent=gene-C9E95_RS01155;Dbxref=GenBank:WP_079968219.1;Name=WP_079968219.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459198.1;locus_tag=C9E95_RS01155;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_079968219.1;transl_table=11 NZ_PYJW01000019.1 RefSeq gene 18724 20763 . + . ID=gene-C9E95_RS01160;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=C9E95_RS01160;old_locus_tag=C9E95_01175 NZ_PYJW01000019.1 Protein Homology CDS 18724 20763 . + 0 ID=cds-WP_131040942.1;Parent=gene-C9E95_RS01160;Dbxref=GenBank:WP_131040942.1;Name=WP_131040942.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=C9E95_RS01160;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_131040942.1;transl_table=11 ##sequence-region NZ_PYJW01000110.1 1 20992 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000110.1 RefSeq region 1 20992 . + . ID=NZ_PYJW01000110.1:1..20992;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000110.1 RefSeq gene 174 686 . - . ID=gene-C9E95_RS11550;Name=C9E95_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11550;old_locus_tag=C9E95_11845 NZ_PYJW01000110.1 Protein Homology CDS 174 686 . - 0 ID=cds-WP_001195556.1;Parent=gene-C9E95_RS11550;Dbxref=GenBank:WP_001195556.1;Name=WP_001195556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460071.1;locus_tag=C9E95_RS11550;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WP_001195556.1;transl_table=11 NZ_PYJW01000110.1 RefSeq gene 704 2266 . - . ID=gene-C9E95_RS11555;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=C9E95_RS11555;old_locus_tag=C9E95_11850 NZ_PYJW01000110.1 Protein Homology CDS 704 2266 . - 0 ID=cds-WP_000801496.1;Parent=gene-C9E95_RS11555;Dbxref=GenBank:WP_000801496.1;Name=WP_000801496.1;Ontology_term=GO:0010124,GO:0016712,GO:0050660;gbkey=CDS;gene=hpaB;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C reduced flavin or flavoprotein as one donor%2C and incorporation of one atom of oxygen|0016712||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=C9E95_RS11555;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_000801496.1;transl_table=11 NZ_PYJW01000110.1 RefSeq gene 2484 2924 . - . ID=gene-C9E95_RS11560;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=C9E95_RS11560;old_locus_tag=C9E95_11855 NZ_PYJW01000110.1 Protein Homology CDS 2484 2924 . - 0 ID=cds-WP_000543921.1;Parent=gene-C9E95_RS11560;Dbxref=GenBank:WP_000543921.1;Name=WP_000543921.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460073.1;locus_tag=C9E95_RS11560;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_000543921.1;transl_table=11 NZ_PYJW01000110.1 RefSeq gene 3199 4488 . + . ID=gene-C9E95_RS11565;Name=hpaG;gbkey=Gene;gene=hpaG;gene_biotype=protein_coding;locus_tag=C9E95_RS11565;old_locus_tag=C9E95_11860 NZ_PYJW01000110.1 Protein Homology CDS 3199 4488 . + 0 ID=cds-WP_000679210.1;Parent=gene-C9E95_RS11565;Dbxref=GenBank:WP_000679210.1;Name=WP_000679210.1;Ontology_term=GO:1901023,GO:0008704,GO:0018800;gbkey=CDS;gene=hpaG;go_function=5-carboxymethyl-2-hydroxymuconate delta-isomerase activity|0008704||IEA,5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase activity|0018800||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460074.1;locus_tag=C9E95_RS11565;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=WP_000679210.1;transl_table=11 NZ_PYJW01000110.1 RefSeq gene 4485 5951 . + . ID=gene-C9E95_RS11570;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=C9E95_RS11570;old_locus_tag=C9E95_11865 NZ_PYJW01000110.1 Protein Homology CDS 4485 5951 . + 0 ID=cds-WP_000723529.1;Parent=gene-C9E95_RS11570;Dbxref=GenBank:WP_000723529.1;Name=WP_000723529.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=C9E95_RS11570;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_000723529.1;transl_table=11 NZ_PYJW01000110.1 RefSeq gene 5953 6804 . + . ID=gene-C9E95_RS11575;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=C9E95_RS11575;old_locus_tag=C9E95_11870 NZ_PYJW01000110.1 Protein Homology CDS 5953 6804 . + 0 ID=cds-WP_000516978.1;Parent=gene-C9E95_RS11575;Dbxref=GenBank:WP_000516978.1;Name=WP_000516978.1;Ontology_term=GO:0008152,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460076.1;locus_tag=C9E95_RS11575;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_000516978.1;transl_table=11 NZ_PYJW01000110.1 RefSeq gene 6815 7195 . + . ID=gene-C9E95_RS11580;Name=C9E95_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11580;old_locus_tag=C9E95_11875 NZ_PYJW01000110.1 Protein Homology CDS 6815 7195 . + 0 ID=cds-WP_001119849.1;Parent=gene-C9E95_RS11580;Dbxref=GenBank:WP_001119849.1;Name=WP_001119849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460077.1;locus_tag=C9E95_RS11580;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_001119849.1;transl_table=11 NZ_PYJW01000110.1 RefSeq gene 7339 8142 . + . ID=gene-C9E95_RS11590;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=C9E95_RS11590;old_locus_tag=C9E95_11885 NZ_PYJW01000110.1 Protein Homology CDS 7339 8142 . + 0 ID=cds-WP_000884795.1;Parent=gene-C9E95_RS11590;Dbxref=GenBank:WP_000884795.1;Name=WP_000884795.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460078.1;locus_tag=C9E95_RS11590;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=WP_000884795.1;transl_table=11 NZ_PYJW01000110.1 RefSeq gene 8153 8944 . + . ID=gene-C9E95_RS11595;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=C9E95_RS11595;old_locus_tag=C9E95_11890 NZ_PYJW01000110.1 Protein Homology CDS 8153 8944 . + 0 ID=cds-WP_080203873.1;Parent=gene-C9E95_RS11595;Dbxref=GenBank:WP_080203873.1;Name=WP_080203873.1;Ontology_term=GO:0010124;gbkey=CDS;gene=hpaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460079.1;locus_tag=C9E95_RS11595;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_080203873.1;transl_table=11 NZ_PYJW01000110.1 RefSeq gene 9016 10392 . + . ID=gene-C9E95_RS11600;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=C9E95_RS11600;old_locus_tag=C9E95_11895 NZ_PYJW01000110.1 Protein Homology CDS 9016 10392 . + 0 ID=cds-WP_001285803.1;Parent=gene-C9E95_RS11600;Dbxref=GenBank:WP_001285803.1;Name=WP_001285803.1;Ontology_term=GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=C9E95_RS11600;product=4-hydroxyphenylacetate permease;protein_id=WP_001285803.1;transl_table=11 NZ_PYJW01000110.1 RefSeq gene 10402 11298 . + . ID=gene-C9E95_RS11605;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=C9E95_RS11605;old_locus_tag=C9E95_11900 NZ_PYJW01000110.1 Protein Homology CDS 10402 11298 . + 0 ID=cds-WP_000336602.1;Parent=gene-C9E95_RS11605;Dbxref=GenBank:WP_000336602.1;Name=WP_000336602.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460081.1;locus_tag=C9E95_RS11605;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WP_000336602.1;transl_table=11 NZ_PYJW01000110.1 RefSeq gene 11312 12250 . + . ID=gene-C9E95_RS11610;Name=C9E95_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11610;old_locus_tag=C9E95_11905 NZ_PYJW01000110.1 Protein Homology CDS 11312 12250 . + 0 ID=cds-WP_000976561.1;Parent=gene-C9E95_RS11610;Dbxref=GenBank:WP_000976561.1;Name=WP_000976561.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460082.1;locus_tag=C9E95_RS11610;product=MBL fold metallo-hydrolase;protein_id=WP_000976561.1;transl_table=11 NZ_PYJW01000110.1 RefSeq gene 12658 13020 . - . ID=gene-C9E95_RS11615;Name=C9E95_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11615;old_locus_tag=C9E95_11910 NZ_PYJW01000110.1 Protein Homology CDS 12658 13020 . - 0 ID=cds-WP_001537781.1;Parent=gene-C9E95_RS11615;Dbxref=GenBank:WP_001537781.1;Name=WP_001537781.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460083.1;locus_tag=C9E95_RS11615;product=anti-adapter protein IraM;protein_id=WP_001537781.1;transl_table=11 NZ_PYJW01000110.1 RefSeq gene 13674 13979 . - . ID=gene-C9E95_RS11625;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=C9E95_RS11625;old_locus_tag=C9E95_11920 NZ_PYJW01000110.1 Protein Homology CDS 13674 13979 . - 0 ID=cds-WP_001284251.1;Parent=gene-C9E95_RS11625;Dbxref=GenBank:WP_001284251.1;Name=WP_001284251.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460084.1;locus_tag=C9E95_RS11625;product=chaperone modulator CbpM;protein_id=WP_001284251.1;transl_table=11 NZ_PYJW01000110.1 RefSeq gene 13979 14899 . - . ID=gene-C9E95_RS11630;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=C9E95_RS11630;old_locus_tag=C9E95_11925 NZ_PYJW01000110.1 Protein Homology CDS 13979 14899 . - 0 ID=cds-WP_080203874.1;Parent=gene-C9E95_RS11630;Dbxref=GenBank:WP_080203874.1;Name=WP_080203874.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460085.1;locus_tag=C9E95_RS11630;product=curved DNA-binding protein;protein_id=WP_080203874.1;transl_table=11 NZ_PYJW01000110.1 RefSeq gene 15135 15497 . + . ID=gene-C9E95_RS11635;Name=C9E95_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11635;old_locus_tag=C9E95_11935 NZ_PYJW01000110.1 Protein Homology CDS 15135 15497 . + 0 ID=cds-WP_001118902.1;Parent=gene-C9E95_RS11635;Dbxref=GenBank:WP_001118902.1;Name=WP_001118902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460086.1;locus_tag=C9E95_RS11635;product=copper resistance protein;protein_id=WP_001118902.1;transl_table=11 NZ_PYJW01000110.1 RefSeq gene 15546 17432 . + . ID=gene-C9E95_RS11640;Name=C9E95_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11640;old_locus_tag=C9E95_11940 NZ_PYJW01000110.1 Protein Homology CDS 15546 17432 . + 0 ID=cds-WP_080219596.1;Parent=gene-C9E95_RS11640;Dbxref=GenBank:WP_080219596.1;Name=WP_080219596.1;Ontology_term=GO:0009055,GO:0015036;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460087.1;locus_tag=C9E95_RS11640;product=protein-disulfide reductase DsbD family protein;protein_id=WP_080219596.1;transl_table=11 NZ_PYJW01000110.1 RefSeq gene 17429 18052 . + . ID=gene-C9E95_RS11645;Name=C9E95_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11645;old_locus_tag=C9E95_11945 NZ_PYJW01000110.1 Protein Homology CDS 17429 18052 . + 0 ID=cds-WP_000876687.1;Parent=gene-C9E95_RS11645;Dbxref=GenBank:WP_000876687.1;Name=WP_000876687.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460088.1;locus_tag=C9E95_RS11645;product=DsbA family protein;protein_id=WP_000876687.1;transl_table=11 NZ_PYJW01000110.1 RefSeq gene 18042 18548 . + . ID=gene-C9E95_RS11650;Name=C9E95_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11650;old_locus_tag=C9E95_11950 NZ_PYJW01000110.1 Protein Homology CDS 18042 18548 . + 0 ID=cds-WP_000907530.1;Parent=gene-C9E95_RS11650;Dbxref=GenBank:WP_000907530.1;Name=WP_000907530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460089.1;locus_tag=C9E95_RS11650;product=protein disulfide oxidoreductase;protein_id=WP_000907530.1;transl_table=11 NZ_PYJW01000110.1 RefSeq gene 18681 19922 . + . ID=gene-C9E95_RS11655;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=C9E95_RS11655;old_locus_tag=C9E95_11955 NZ_PYJW01000110.1 Protein Homology CDS 18681 19922 . + 0 ID=cds-WP_000749194.1;Parent=gene-C9E95_RS11655;Dbxref=GenBank:WP_000749194.1;Name=WP_000749194.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460090.1;locus_tag=C9E95_RS11655;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_000749194.1;transl_table=11 NZ_PYJW01000110.1 RefSeq gene 19956 20183 . - . ID=gene-C9E95_RS11660;Name=C9E95_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11660;old_locus_tag=C9E95_11960 NZ_PYJW01000110.1 Protein Homology CDS 19956 20183 . - 0 ID=cds-WP_001143125.1;Parent=gene-C9E95_RS11660;Dbxref=GenBank:WP_001143125.1;Name=WP_001143125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=C9E95_RS11660;product=YccJ family protein;protein_id=WP_001143125.1;transl_table=11 NZ_PYJW01000110.1 RefSeq gene 20204 20800 . - . ID=gene-C9E95_RS11665;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=C9E95_RS11665;old_locus_tag=C9E95_11965 NZ_PYJW01000110.1 Protein Homology CDS 20204 20800 . - 0 ID=cds-WP_001062898.1;Parent=gene-C9E95_RS11665;Dbxref=GenBank:WP_001062898.1;Name=WP_001062898.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460092.1;locus_tag=C9E95_RS11665;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_001062898.1;transl_table=11 ##sequence-region NZ_PYJW01000070.1 1 20480 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000070.1 RefSeq region 1 20480 . + . ID=NZ_PYJW01000070.1:1..20480;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000070.1 RefSeq gene 77 676 . - . ID=gene-C9E95_RS06835;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=C9E95_RS06835;old_locus_tag=C9E95_06990 NZ_PYJW01000070.1 Protein Homology CDS 77 676 . - 0 ID=cds-WP_000813882.1;Parent=gene-C9E95_RS06835;Dbxref=GenBank:WP_000813882.1;Name=WP_000813882.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461274.1;locus_tag=C9E95_RS06835;product=5'-deoxynucleotidase;protein_id=WP_000813882.1;transl_table=11 NZ_PYJW01000070.1 RefSeq gene 770 1984 . - . ID=gene-C9E95_RS06840;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=C9E95_RS06840;old_locus_tag=C9E95_06995 NZ_PYJW01000070.1 Protein Homology CDS 770 1984 . - 0 ID=cds-WP_000074540.1;Parent=gene-C9E95_RS06840;Dbxref=GenBank:WP_000074540.1;Name=WP_000074540.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461273.1;locus_tag=C9E95_RS06840;product=alanine transaminase AlaA;protein_id=WP_000074540.1;transl_table=11 NZ_PYJW01000070.1 RefSeq gene 2916 3854 . + . ID=gene-C9E95_RS06850;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=C9E95_RS06850;old_locus_tag=C9E95_07005 NZ_PYJW01000070.1 Protein Homology CDS 2916 3854 . + 0 ID=cds-WP_000606288.1;Parent=gene-C9E95_RS06850;Dbxref=GenBank:WP_000606288.1;Name=WP_000606288.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461272.1;locus_tag=C9E95_RS06850;product=transcriptional regulator LrhA;protein_id=WP_000606288.1;transl_table=11 NZ_PYJW01000070.1 RefSeq gene 3934 4086 . + . ID=gene-C9E95_RS06855;Name=C9E95_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06855;old_locus_tag=C9E95_07010 NZ_PYJW01000070.1 Protein Homology CDS 3934 4086 . + 0 ID=cds-WP_001522276.1;Parent=gene-C9E95_RS06855;Dbxref=GenBank:WP_001522276.1;Name=WP_001522276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461271.1;locus_tag=C9E95_RS06855;product=STM2329 family putative cytoplasmic protein;protein_id=WP_001522276.1;transl_table=11 NZ_PYJW01000070.1 RefSeq gene 4481 4924 . + . ID=gene-C9E95_RS06860;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=C9E95_RS06860;old_locus_tag=C9E95_07015 NZ_PYJW01000070.1 Protein Homology CDS 4481 4924 . + 0 ID=cds-WP_000062993.1;Parent=gene-C9E95_RS06860;Dbxref=GenBank:WP_000062993.1;Name=WP_000062993.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461270.1;locus_tag=C9E95_RS06860;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_000062993.1;transl_table=11 NZ_PYJW01000070.1 RefSeq gene 4940 5602 . + . ID=gene-C9E95_RS06865;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=C9E95_RS06865;old_locus_tag=C9E95_07020 NZ_PYJW01000070.1 Protein Homology CDS 4940 5602 . + 0 ID=cds-WP_000386728.1;Parent=gene-C9E95_RS06865;Dbxref=GenBank:WP_000386728.1;Name=WP_000386728.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461269.1;locus_tag=C9E95_RS06865;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_000386728.1;transl_table=11 NZ_PYJW01000070.1 RefSeq gene 5689 7491 . + . ID=gene-C9E95_RS06870;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=C9E95_RS06870;old_locus_tag=C9E95_07025 NZ_PYJW01000070.1 Protein Homology CDS 5689 7491 . + 0 ID=cds-WP_000247855.1;Parent=gene-C9E95_RS06870;Dbxref=GenBank:WP_000247855.1;Name=WP_000247855.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461268.1;locus_tag=C9E95_RS06870;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_000247855.1;transl_table=11 NZ_PYJW01000070.1 RefSeq gene 7494 7994 . + . ID=gene-C9E95_RS06875;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=C9E95_RS06875;old_locus_tag=C9E95_07030 NZ_PYJW01000070.1 Protein Homology CDS 7494 7994 . + 0 ID=cds-WP_000545038.1;Parent=gene-C9E95_RS06875;Dbxref=GenBank:WP_000545038.1;Name=WP_000545038.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461267.1;locus_tag=C9E95_RS06875;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_000545038.1;transl_table=11 NZ_PYJW01000070.1 RefSeq gene 7991 9328 . + . ID=gene-C9E95_RS06880;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=C9E95_RS06880;old_locus_tag=C9E95_07035 NZ_PYJW01000070.1 Protein Homology CDS 7991 9328 . + 0 ID=cds-WP_000800048.1;Parent=gene-C9E95_RS06880;Dbxref=GenBank:WP_000800048.1;Name=WP_000800048.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461266.1;locus_tag=C9E95_RS06880;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_000800048.1;transl_table=11 NZ_PYJW01000070.1 RefSeq gene 9359 12085 . + . ID=gene-C9E95_RS06885;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=C9E95_RS06885;old_locus_tag=C9E95_07040 NZ_PYJW01000070.1 Protein Homology CDS 9359 12085 . + 0 ID=cds-WP_001518099.1;Parent=gene-C9E95_RS06885;Dbxref=GenBank:WP_001518099.1;Name=WP_001518099.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=C9E95_RS06885;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_001518099.1;transl_table=11 NZ_PYJW01000070.1 RefSeq gene 12082 13059 . + . ID=gene-C9E95_RS06890;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=C9E95_RS06890;old_locus_tag=C9E95_07045 NZ_PYJW01000070.1 Protein Homology CDS 12082 13059 . + 0 ID=cds-WP_000118515.1;Parent=gene-C9E95_RS06890;Dbxref=GenBank:WP_000118515.1;Name=WP_000118515.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=C9E95_RS06890;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_000118515.1;transl_table=11 NZ_PYJW01000070.1 RefSeq gene 13074 13616 . + . ID=gene-C9E95_RS06895;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=C9E95_RS06895;old_locus_tag=C9E95_07050 NZ_PYJW01000070.1 Protein Homology CDS 13074 13616 . + 0 ID=cds-WP_000172747.1;Parent=gene-C9E95_RS06895;Dbxref=GenBank:WP_000172747.1;Name=WP_000172747.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=C9E95_RS06895;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_000172747.1;transl_table=11 NZ_PYJW01000070.1 RefSeq gene 13627 14181 . + . ID=gene-C9E95_RS06900;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=C9E95_RS06900;old_locus_tag=C9E95_07055 NZ_PYJW01000070.1 Protein Homology CDS 13627 14181 . + 0 ID=cds-WP_080203972.1;Parent=gene-C9E95_RS06900;Dbxref=GenBank:WP_080203972.1;Name=WP_080203972.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461262.1;locus_tag=C9E95_RS06900;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_080203972.1;transl_table=11 NZ_PYJW01000070.1 RefSeq gene 14178 14480 . + . ID=gene-C9E95_RS06905;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=C9E95_RS06905;old_locus_tag=C9E95_07060 NZ_PYJW01000070.1 Protein Homology CDS 14178 14480 . + 0 ID=cds-WP_000612687.1;Parent=gene-C9E95_RS06905;Dbxref=GenBank:WP_000612687.1;Name=WP_000612687.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=C9E95_RS06905;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_000612687.1;transl_table=11 NZ_PYJW01000070.1 RefSeq gene 14477 16318 . + . ID=gene-C9E95_RS06910;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=C9E95_RS06910;old_locus_tag=C9E95_07065 NZ_PYJW01000070.1 Protein Homology CDS 14477 16318 . + 0 ID=cds-WP_001056582.1;Parent=gene-C9E95_RS06910;Dbxref=GenBank:WP_001056582.1;Name=WP_001056582.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=C9E95_RS06910;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_001056582.1;transl_table=11 NZ_PYJW01000070.1 RefSeq gene 16632 18161 . + . ID=gene-C9E95_RS06915;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=C9E95_RS06915;old_locus_tag=C9E95_07075 NZ_PYJW01000070.1 Protein Homology CDS 16632 18161 . + 0 ID=cds-WP_000926431.1;Parent=gene-C9E95_RS06915;Dbxref=GenBank:WP_000926431.1;Name=WP_000926431.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=C9E95_RS06915;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_000926431.1;transl_table=11 NZ_PYJW01000070.1 RefSeq gene 18168 19625 . + . ID=gene-C9E95_RS06920;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=C9E95_RS06920;old_locus_tag=C9E95_07080 NZ_PYJW01000070.1 Protein Homology CDS 18168 19625 . + 0 ID=cds-WP_000156667.1;Parent=gene-C9E95_RS06920;Dbxref=GenBank:WP_000156667.1;Name=WP_000156667.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=C9E95_RS06920;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_000156667.1;transl_table=11 NZ_PYJW01000070.1 RefSeq gene 20003 20170 . - . ID=gene-C9E95_RS06925;Name=C9E95_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06925 NZ_PYJW01000070.1 Protein Homology CDS 20003 20170 . - 0 ID=cds-WP_223149278.1;Parent=gene-C9E95_RS06925;Dbxref=GenBank:WP_223149278.1;Name=WP_223149278.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020544.6;locus_tag=C9E95_RS06925;product=DUF1877 family protein;protein_id=WP_223149278.1;transl_table=11 ##sequence-region NZ_PYJW01000130.1 1 19758 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000130.1 RefSeq region 1 19758 . + . ID=NZ_PYJW01000130.1:1..19758;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000130.1 RefSeq gene 153 1934 . + . ID=gene-C9E95_RS13675;Name=C9E95_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13675;old_locus_tag=C9E95_14020 NZ_PYJW01000130.1 Protein Homology CDS 153 1934 . + 0 ID=cds-WP_080203971.1;Parent=gene-C9E95_RS13675;Dbxref=GenBank:WP_080203971.1;Name=WP_080203971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461257.1;locus_tag=C9E95_RS13675;product=vWA domain-containing protein;protein_id=WP_080203971.1;transl_table=11 NZ_PYJW01000130.1 RefSeq gene 1975 2976 . - . ID=gene-C9E95_RS13680;Name=C9E95_RS13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13680;old_locus_tag=C9E95_14025 NZ_PYJW01000130.1 Protein Homology CDS 1975 2976 . - 0 ID=cds-WP_080203970.1;Parent=gene-C9E95_RS13680;Dbxref=GenBank:WP_080203970.1;Name=WP_080203970.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461256.1;locus_tag=C9E95_RS13680;product=chemotaxis protein;protein_id=WP_080203970.1;transl_table=11 NZ_PYJW01000130.1 RefSeq gene 3042 3959 . - . ID=gene-C9E95_RS13685;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=C9E95_RS13685;old_locus_tag=C9E95_14030 NZ_PYJW01000130.1 Protein Homology CDS 3042 3959 . - 0 ID=cds-WP_000419093.1;Parent=gene-C9E95_RS13685;Dbxref=GenBank:WP_000419093.1;Name=WP_000419093.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rbn;go_function=RNA endonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461255.1;locus_tag=C9E95_RS13685;product=ribonuclease BN;protein_id=WP_000419093.1;transl_table=11 NZ_PYJW01000130.1 RefSeq gene 4020 4481 . + . ID=gene-C9E95_RS13690;Name=C9E95_RS13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13690;old_locus_tag=C9E95_14035 NZ_PYJW01000130.1 Protein Homology CDS 4020 4481 . + 0 ID=cds-WP_023993411.1;Parent=gene-C9E95_RS13690;Dbxref=GenBank:WP_023993411.1;Name=WP_023993411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461254.1;locus_tag=C9E95_RS13690;product=GNAT family N-acetyltransferase;protein_id=WP_023993411.1;transl_table=11 NZ_PYJW01000130.1 RefSeq gene 4536 4841 . + . ID=gene-C9E95_RS13695;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=C9E95_RS13695;old_locus_tag=C9E95_14040 NZ_PYJW01000130.1 Protein Homology CDS 4536 4841 . + 0 ID=cds-WP_001519663.1;Parent=gene-C9E95_RS13695;Dbxref=GenBank:WP_001519663.1;Name=WP_001519663.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=C9E95_RS13695;product=stress response protein ElaB;protein_id=WP_001519663.1;transl_table=11 NZ_PYJW01000130.1 RefSeq gene 4942 6237 . + . ID=gene-C9E95_RS13700;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=C9E95_RS13700;old_locus_tag=C9E95_14045 NZ_PYJW01000130.1 Protein Homology CDS 4942 6237 . + 0 ID=cds-WP_000555674.1;Parent=gene-C9E95_RS13700;Dbxref=GenBank:WP_000555674.1;Name=WP_000555674.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461252.1;locus_tag=C9E95_RS13700;product=isochorismate synthase MenF;protein_id=WP_000555674.1;transl_table=11 NZ_PYJW01000130.1 RefSeq gene 6323 7993 . + . ID=gene-C9E95_RS13705;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=C9E95_RS13705;old_locus_tag=C9E95_14050 NZ_PYJW01000130.1 Protein Homology CDS 6323 7993 . + 0 ID=cds-WP_023993410.1;Parent=gene-C9E95_RS13705;Dbxref=GenBank:WP_023993410.1;Name=WP_023993410.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461251.1;locus_tag=C9E95_RS13705;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_023993410.1;transl_table=11 NZ_PYJW01000130.1 RefSeq gene 7990 8748 . + . ID=gene-C9E95_RS13710;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=C9E95_RS13710;old_locus_tag=C9E95_14055 NZ_PYJW01000130.1 Protein Homology CDS 7990 8748 . + 0 ID=cds-WP_080203969.1;Parent=gene-C9E95_RS13710;Dbxref=GenBank:WP_080203969.1;Name=WP_080203969.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461250.1;locus_tag=C9E95_RS13710;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_080203969.1;transl_table=11 NZ_PYJW01000130.1 RefSeq gene 8763 9620 . + . ID=gene-C9E95_RS13715;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=C9E95_RS13715;old_locus_tag=C9E95_14060 NZ_PYJW01000130.1 Protein Homology CDS 8763 9620 . + 0 ID=cds-WP_000640013.1;Parent=gene-C9E95_RS13715;Dbxref=GenBank:WP_000640013.1;Name=WP_000640013.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=C9E95_RS13715;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000640013.1;transl_table=11 NZ_PYJW01000130.1 RefSeq gene 9620 10582 . + . ID=gene-C9E95_RS13720;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=C9E95_RS13720;old_locus_tag=C9E95_14065 NZ_PYJW01000130.1 Protein Homology CDS 9620 10582 . + 0 ID=cds-WP_001255561.1;Parent=gene-C9E95_RS13720;Dbxref=GenBank:WP_001255561.1;Name=WP_001255561.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461248.1;locus_tag=C9E95_RS13720;product=o-succinylbenzoate synthase;protein_id=WP_001255561.1;transl_table=11 NZ_PYJW01000130.1 RefSeq gene 10579 11946 . + . ID=gene-C9E95_RS13725;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=C9E95_RS13725;old_locus_tag=C9E95_14070 NZ_PYJW01000130.1 Protein Homology CDS 10579 11946 . + 0 ID=cds-WP_023245205.1;Parent=gene-C9E95_RS13725;Dbxref=GenBank:WP_023245205.1;Name=WP_023245205.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461247.1;locus_tag=C9E95_RS13725;product=o-succinylbenzoate--CoA ligase;protein_id=WP_023245205.1;transl_table=11 NZ_PYJW01000130.1 RefSeq gene 12044 12301 . + . ID=gene-C9E95_RS13730;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=C9E95_RS13730;old_locus_tag=C9E95_14075 NZ_PYJW01000130.1 Protein Homology CDS 12044 12301 . + 0 ID=cds-WP_000455132.1;Parent=gene-C9E95_RS13730;Dbxref=GenBank:WP_000455132.1;Name=WP_000455132.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461246.1;locus_tag=C9E95_RS13730;product=signal transduction protein PmrD;protein_id=WP_000455132.1;transl_table=11 NZ_PYJW01000130.1 RefSeq gene 12296 12673 . - . ID=gene-C9E95_RS13735;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=C9E95_RS13735;old_locus_tag=C9E95_14080 NZ_PYJW01000130.1 Protein Homology CDS 12296 12673 . - 0 ID=cds-WP_000538694.1;Parent=gene-C9E95_RS13735;Dbxref=GenBank:WP_000538694.1;Name=WP_000538694.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461245.1;locus_tag=C9E95_RS13735;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_000538694.1;transl_table=11 NZ_PYJW01000130.1 RefSeq gene 12673 13008 . - . ID=gene-C9E95_RS13740;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=C9E95_RS13740;old_locus_tag=C9E95_14085 NZ_PYJW01000130.1 Protein Homology CDS 12673 13008 . - 0 ID=cds-WP_000580685.1;Parent=gene-C9E95_RS13740;Dbxref=GenBank:WP_000580685.1;Name=WP_000580685.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461244.1;locus_tag=C9E95_RS13740;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_000580685.1;transl_table=11 NZ_PYJW01000130.1 RefSeq gene 13005 14651 . - . ID=gene-C9E95_RS13745;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=C9E95_RS13745;old_locus_tag=C9E95_14090 NZ_PYJW01000130.1 Protein Homology CDS 13005 14651 . - 0 ID=cds-WP_021000544.1;Parent=gene-C9E95_RS13745;Dbxref=GenBank:WP_021000544.1;Name=WP_021000544.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461243.1;locus_tag=C9E95_RS13745;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_021000544.1;transl_table=11 NZ_PYJW01000130.1 RefSeq gene 14648 15547 . - . ID=gene-C9E95_RS13750;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=C9E95_RS13750;old_locus_tag=C9E95_14095 NZ_PYJW01000130.1 Protein Homology CDS 14648 15547 . - 0 ID=cds-WP_080203968.1;Parent=gene-C9E95_RS13750;Dbxref=GenBank:WP_080203968.1;Name=WP_080203968.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461242.1;locus_tag=C9E95_RS13750;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_080203968.1;transl_table=11 NZ_PYJW01000130.1 RefSeq gene 15544 17526 . - . ID=gene-C9E95_RS13755;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=C9E95_RS13755;old_locus_tag=C9E95_14100 NZ_PYJW01000130.1 Protein Homology CDS 15544 17526 . - 0 ID=cds-WP_080203967.1;Parent=gene-C9E95_RS13755;Dbxref=GenBank:WP_080203967.1;Name=WP_080203967.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461241.1;locus_tag=C9E95_RS13755;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_080203967.1;transl_table=11 NZ_PYJW01000130.1 RefSeq gene 17523 18506 . - . ID=gene-C9E95_RS13760;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=C9E95_RS13760;old_locus_tag=C9E95_14105 NZ_PYJW01000130.1 Protein Homology CDS 17523 18506 . - 0 ID=cds-WP_000458894.1;Parent=gene-C9E95_RS13760;Dbxref=GenBank:WP_000458894.1;Name=WP_000458894.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461240.1;locus_tag=C9E95_RS13760;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_000458894.1;transl_table=11 NZ_PYJW01000130.1 RefSeq gene 18509 19648 . - . ID=gene-C9E95_RS13765;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=C9E95_RS13765;old_locus_tag=C9E95_14110 NZ_PYJW01000130.1 Protein Homology CDS 18509 19648 . - 0 ID=cds-WP_129397174.1;Parent=gene-C9E95_RS13765;Dbxref=GenBank:WP_129397174.1;Name=WP_129397174.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=C9E95_RS13765;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_129397174.1;transl_table=11 ##sequence-region NZ_PYJW01000084.1 1 475 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000084.1 RefSeq region 1 475 . + . ID=NZ_PYJW01000084.1:1..475;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000084.1 RefSeq gene 139 254 . - . ID=gene-C9E95_RS08770;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9E95_RS08770;old_locus_tag=C9E95_08990 NZ_PYJW01000084.1 cmsearch rRNA 139 254 . - . ID=rna-C9E95_RS08770;Parent=gene-C9E95_RS08770;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS08770;product=5S ribosomal RNA NZ_PYJW01000084.1 cmsearch exon 139 254 . - . ID=exon-C9E95_RS08770-1;Parent=rna-C9E95_RS08770;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS08770;product=5S ribosomal RNA ##sequence-region NZ_PYJW01000136.1 1 19063 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000136.1 RefSeq region 1 19063 . + . ID=NZ_PYJW01000136.1:1..19063;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000136.1 RefSeq gene 426 713 . + . ID=gene-C9E95_RS14240;Name=C9E95_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14240;old_locus_tag=C9E95_14605 NZ_PYJW01000136.1 Protein Homology CDS 426 713 . + 0 ID=cds-WP_001226439.1;Parent=gene-C9E95_RS14240;Dbxref=GenBank:WP_001226439.1;Name=WP_001226439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463083.1;locus_tag=C9E95_RS14240;product=putative holin;protein_id=WP_001226439.1;transl_table=11 NZ_PYJW01000136.1 RefSeq gene 716 1321 . + . ID=gene-C9E95_RS14245;Name=C9E95_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14245;old_locus_tag=C9E95_14610 NZ_PYJW01000136.1 Protein Homology CDS 716 1321 . + 0 ID=cds-WP_080203653.1;Parent=gene-C9E95_RS14245;Dbxref=GenBank:WP_080203653.1;Name=WP_080203653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463082.1;locus_tag=C9E95_RS14245;product=lytic transglycosylase domain-containing protein;protein_id=WP_080203653.1;transl_table=11 NZ_PYJW01000136.1 RefSeq gene 1334 1648 . + . ID=gene-C9E95_RS14250;Name=C9E95_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14250;old_locus_tag=C9E95_14615 NZ_PYJW01000136.1 Protein Homology CDS 1334 1648 . + 0 ID=cds-WP_000777266.1;Parent=gene-C9E95_RS14250;Dbxref=GenBank:WP_000777266.1;Name=WP_000777266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463081.1;locus_tag=C9E95_RS14250;product=membrane protein;protein_id=WP_000777266.1;transl_table=11 NZ_PYJW01000136.1 RefSeq gene 1808 2263 . + . ID=gene-C9E95_RS14255;Name=C9E95_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14255;old_locus_tag=C9E95_14620 NZ_PYJW01000136.1 Protein Homology CDS 1808 2263 . + 0 ID=cds-WP_080203652.1;Parent=gene-C9E95_RS14255;Dbxref=GenBank:WP_080203652.1;Name=WP_080203652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463080.1;locus_tag=C9E95_RS14255;product=Gp37 family protein;protein_id=WP_080203652.1;transl_table=11 NZ_PYJW01000136.1 RefSeq gene 2260 2457 . + . ID=gene-C9E95_RS14260;Name=C9E95_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14260;old_locus_tag=C9E95_14625 NZ_PYJW01000136.1 Protein Homology CDS 2260 2457 . + 0 ID=cds-WP_000875313.1;Parent=gene-C9E95_RS14260;Dbxref=GenBank:WP_000875313.1;Name=WP_000875313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463079.1;locus_tag=C9E95_RS14260;product=hypothetical protein;protein_id=WP_000875313.1;transl_table=11 NZ_PYJW01000136.1 RefSeq gene 2447 3874 . + . ID=gene-C9E95_RS14265;Name=C9E95_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14265;old_locus_tag=C9E95_14630 NZ_PYJW01000136.1 Protein Homology CDS 2447 3874 . + 0 ID=cds-WP_031606104.1;Parent=gene-C9E95_RS14265;Dbxref=GenBank:WP_031606104.1;Name=WP_031606104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463078.1;locus_tag=C9E95_RS14265;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_031606104.1;transl_table=11 NZ_PYJW01000136.1 RefSeq gene 3874 4398 . + . ID=gene-C9E95_RS14270;Name=C9E95_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14270;old_locus_tag=C9E95_14635 NZ_PYJW01000136.1 Protein Homology CDS 3874 4398 . + 0 ID=cds-WP_000907495.1;Parent=gene-C9E95_RS14270;Dbxref=GenBank:WP_000907495.1;Name=WP_000907495.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463077.1;locus_tag=C9E95_RS14270;product=phage major tail tube protein;protein_id=WP_000907495.1;transl_table=11 NZ_PYJW01000136.1 RefSeq gene 4450 4767 . + . ID=gene-C9E95_RS14275;Name=C9E95_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14275;old_locus_tag=C9E95_14640 NZ_PYJW01000136.1 Protein Homology CDS 4450 4767 . + 0 ID=cds-WP_001003638.1;Parent=gene-C9E95_RS14275;Dbxref=GenBank:WP_001003638.1;Name=WP_001003638.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001003637.1;locus_tag=C9E95_RS14275;product=phage tail assembly protein;protein_id=WP_001003638.1;transl_table=11 NZ_PYJW01000136.1 RefSeq gene 4727 4855 . + . ID=gene-C9E95_RS14280;Name=C9E95_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14280;old_locus_tag=C9E95_14645 NZ_PYJW01000136.1 Protein Homology CDS 4727 4855 . + 0 ID=cds-WP_001728452.1;Parent=gene-C9E95_RS14280;Dbxref=GenBank:WP_001728452.1;Name=WP_001728452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728452.1;locus_tag=C9E95_RS14280;product=GpE family phage tail protein;protein_id=WP_001728452.1;transl_table=11 NZ_PYJW01000136.1 RefSeq gene 4952 7306 . + . ID=gene-C9E95_RS14285;Name=C9E95_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14285;old_locus_tag=C9E95_14650 NZ_PYJW01000136.1 Protein Homology CDS 4952 7306 . + 0 ID=cds-WP_023993550.1;Parent=gene-C9E95_RS14285;Dbxref=GenBank:WP_023993550.1;Name=WP_023993550.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463076.1;locus_tag=C9E95_RS14285;product=phage tail tape measure protein;protein_id=WP_023993550.1;transl_table=11 NZ_PYJW01000136.1 RefSeq gene 7306 8259 . + . ID=gene-C9E95_RS14290;Name=C9E95_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14290;old_locus_tag=C9E95_14655 NZ_PYJW01000136.1 Protein Homology CDS 7306 8259 . + 0 ID=cds-WP_000271425.1;Parent=gene-C9E95_RS14290;Dbxref=GenBank:WP_000271425.1;Name=WP_000271425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463075.1;locus_tag=C9E95_RS14290;product=phage tail protein;protein_id=WP_000271425.1;transl_table=11 NZ_PYJW01000136.1 RefSeq gene 8259 8468 . + . ID=gene-C9E95_RS14295;Name=C9E95_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14295;old_locus_tag=C9E95_14660 NZ_PYJW01000136.1 Protein Homology CDS 8259 8468 . + 0 ID=cds-WP_023993551.1;Parent=gene-C9E95_RS14295;Dbxref=GenBank:WP_023993551.1;Name=WP_023993551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463074.1;locus_tag=C9E95_RS14295;product=tail protein X;protein_id=WP_023993551.1;transl_table=11 NZ_PYJW01000136.1 RefSeq gene 8456 9499 . + . ID=gene-C9E95_RS14300;Name=C9E95_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14300;old_locus_tag=C9E95_14665 NZ_PYJW01000136.1 Protein Homology CDS 8456 9499 . + 0 ID=cds-WP_080203651.1;Parent=gene-C9E95_RS14300;Dbxref=GenBank:WP_080203651.1;Name=WP_080203651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463073.1;locus_tag=C9E95_RS14300;product=phage late control D family protein;protein_id=WP_080203651.1;transl_table=11 NZ_PYJW01000136.1 RefSeq gene 9509 10231 . + . ID=gene-C9E95_RS14305;Name=C9E95_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14305;old_locus_tag=C9E95_14670 NZ_PYJW01000136.1 Protein Homology CDS 9509 10231 . + 0 ID=cds-WP_050068050.1;Parent=gene-C9E95_RS14305;Dbxref=GenBank:WP_050068050.1;Name=WP_050068050.1;Ontology_term=GO:0098003,GO:0046872,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_function=metal ion binding|0046872||IEA;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463072.1;locus_tag=C9E95_RS14305;product=phage baseplate assembly protein V;protein_id=WP_050068050.1;transl_table=11 NZ_PYJW01000136.1 RefSeq gene 10559 10921 . + . ID=gene-C9E95_RS14310;Name=C9E95_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14310;old_locus_tag=C9E95_14675 NZ_PYJW01000136.1 Protein Homology CDS 10559 10921 . + 0 ID=cds-WP_000593182.1;Parent=gene-C9E95_RS14310;Dbxref=GenBank:WP_000593182.1;Name=WP_000593182.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463071.1;locus_tag=C9E95_RS14310;product=GtrA family protein;protein_id=WP_000593182.1;transl_table=11 NZ_PYJW01000136.1 RefSeq gene 10918 11847 . + . ID=gene-C9E95_RS14315;Name=C9E95_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14315;old_locus_tag=C9E95_14680 NZ_PYJW01000136.1 Protein Homology CDS 10918 11847 . + 0 ID=cds-WP_000703634.1;Parent=gene-C9E95_RS14315;Dbxref=GenBank:WP_000703634.1;Name=WP_000703634.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463070.1;locus_tag=C9E95_RS14315;product=glycosyltransferase family 2 protein;protein_id=WP_000703634.1;transl_table=11 NZ_PYJW01000136.1 RefSeq gene 11847 13394 . + . ID=gene-C9E95_RS14320;Name=C9E95_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14320;old_locus_tag=C9E95_14685 NZ_PYJW01000136.1 Protein Homology CDS 11847 13394 . + 0 ID=cds-WP_000632048.1;Parent=gene-C9E95_RS14320;Dbxref=GenBank:WP_000632048.1;Name=WP_000632048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463069.1;locus_tag=C9E95_RS14320;product=DUF6056 family protein;protein_id=WP_000632048.1;transl_table=11 NZ_PYJW01000136.1 RefSeq gene 13558 13917 . + . ID=gene-C9E95_RS14325;Name=C9E95_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14325;old_locus_tag=C9E95_14690 NZ_PYJW01000136.1 Protein Homology CDS 13558 13917 . + 0 ID=cds-WP_001093501.1;Parent=gene-C9E95_RS14325;Dbxref=GenBank:WP_001093501.1;Name=WP_001093501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463068.1;locus_tag=C9E95_RS14325;product=GPW/gp25 family protein;protein_id=WP_001093501.1;transl_table=11 NZ_PYJW01000136.1 RefSeq gene 13908 15023 . + . ID=gene-C9E95_RS14330;Name=C9E95_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14330;old_locus_tag=C9E95_14695 NZ_PYJW01000136.1 Protein Homology CDS 13908 15023 . + 0 ID=cds-WP_023993552.1;Parent=gene-C9E95_RS14330;Dbxref=GenBank:WP_023993552.1;Name=WP_023993552.1;Ontology_term=GO:0098045,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_process=virus baseplate assembly|0098045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463067.1;locus_tag=C9E95_RS14330;product=baseplate assembly protein;protein_id=WP_023993552.1;transl_table=11 NZ_PYJW01000136.1 RefSeq gene 15016 15648 . + . ID=gene-C9E95_RS14335;Name=C9E95_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14335;old_locus_tag=C9E95_14700 NZ_PYJW01000136.1 Protein Homology CDS 15016 15648 . + 0 ID=cds-WP_023993553.1;Parent=gene-C9E95_RS14335;Dbxref=GenBank:WP_023993553.1;Name=WP_023993553.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463066.1;locus_tag=C9E95_RS14335;product=phage tail protein I;protein_id=WP_023993553.1;transl_table=11 NZ_PYJW01000136.1 RefSeq gene 15651 17405 . + . ID=gene-C9E95_RS14340;Name=C9E95_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14340;old_locus_tag=C9E95_14705 NZ_PYJW01000136.1 Protein Homology CDS 15651 17405 . + 0 ID=cds-WP_023994534.1;Parent=gene-C9E95_RS14340;Dbxref=GenBank:WP_023994534.1;Name=WP_023994534.1;Ontology_term=GO:0019062,GO:0046718;gbkey=CDS;go_process=virion attachment to host cell|0019062||IEA,symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463065.1;locus_tag=C9E95_RS14340;product=tail fiber protein;protein_id=WP_023994534.1;transl_table=11 NZ_PYJW01000136.1 RefSeq gene 17411 18025 . + . ID=gene-C9E95_RS14345;Name=C9E95_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14345;old_locus_tag=C9E95_14710 NZ_PYJW01000136.1 Protein Homology CDS 17411 18025 . + 0 ID=cds-WP_023994535.1;Parent=gene-C9E95_RS14345;Dbxref=GenBank:WP_023994535.1;Name=WP_023994535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000049617.1;locus_tag=C9E95_RS14345;product=DUF4376 domain-containing protein;protein_id=WP_023994535.1;transl_table=11 NZ_PYJW01000136.1 RefSeq gene 18022 18477 . + . ID=gene-C9E95_RS14350;Name=C9E95_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS14350;old_locus_tag=C9E95_14715 NZ_PYJW01000136.1 Protein Homology CDS 18022 18477 . + 0 ID=cds-WP_023203255.1;Parent=gene-C9E95_RS14350;Dbxref=GenBank:WP_023203255.1;Name=WP_023203255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463063.1;locus_tag=C9E95_RS14350;product=hypothetical protein;protein_id=WP_023203255.1;transl_table=11 NZ_PYJW01000136.1 RefSeq pseudogene 18753 19017 . + . ID=gene-C9E95_RS14355;Name=C9E95_RS14355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS14355;old_locus_tag=C9E95_14720;pseudo=true NZ_PYJW01000136.1 Protein Homology CDS 18753 19017 . + 0 ID=cds-C9E95_RS14355;Parent=gene-C9E95_RS14355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738630.1;locus_tag=C9E95_RS14355;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_PYJW01000167.1 1 18684 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000167.1 RefSeq region 1 18684 . + . ID=NZ_PYJW01000167.1:1..18684;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000167.1 RefSeq gene 6 629 . - . ID=gene-C9E95_RS19560;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=C9E95_RS19560;old_locus_tag=C9E95_20040 NZ_PYJW01000167.1 Protein Homology CDS 6 629 . - 0 ID=cds-WP_001519938.1;Parent=gene-C9E95_RS19560;Dbxref=GenBank:WP_001519938.1;Name=WP_001519938.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462772.3;locus_tag=C9E95_RS19560;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_001519938.1;transl_table=11 NZ_PYJW01000167.1 RefSeq gene 732 2621 . - . ID=gene-C9E95_RS19565;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=C9E95_RS19565;old_locus_tag=C9E95_20045 NZ_PYJW01000167.1 Protein Homology CDS 732 2621 . - 0 ID=cds-WP_000499872.1;Parent=gene-C9E95_RS19565;Dbxref=GenBank:WP_000499872.1;Name=WP_000499872.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=C9E95_RS19565;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_000499872.1;transl_table=11 NZ_PYJW01000167.1 RefSeq gene 3000 3443 . - . ID=gene-C9E95_RS19575;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=C9E95_RS19575;old_locus_tag=C9E95_20055 NZ_PYJW01000167.1 Protein Homology CDS 3000 3443 . - 0 ID=cds-WP_000763722.1;Parent=gene-C9E95_RS19575;Dbxref=GenBank:WP_000763722.1;Name=WP_000763722.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462774.1;locus_tag=C9E95_RS19575;product=FMN-binding protein MioC;protein_id=WP_000763722.1;transl_table=11 NZ_PYJW01000167.1 RefSeq gene 3533 3991 . - . ID=gene-C9E95_RS19580;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=C9E95_RS19580;old_locus_tag=C9E95_20060 NZ_PYJW01000167.1 Protein Homology CDS 3533 3991 . - 0 ID=cds-WP_000433018.1;Parent=gene-C9E95_RS19580;Dbxref=GenBank:WP_000433018.1;Name=WP_000433018.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462775.1;locus_tag=C9E95_RS19580;product=transcriptional regulator AsnC;protein_id=WP_000433018.1;transl_table=11 NZ_PYJW01000167.1 RefSeq gene 4142 5134 . + . ID=gene-C9E95_RS19585;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=C9E95_RS19585;old_locus_tag=C9E95_20065 NZ_PYJW01000167.1 Protein Homology CDS 4142 5134 . + 0 ID=cds-WP_000845123.1;Parent=gene-C9E95_RS19585;Dbxref=GenBank:WP_000845123.1;Name=WP_000845123.1;Ontology_term=GO:0006529,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462776.1;locus_tag=C9E95_RS19585;product=aspartate--ammonia ligase;protein_id=WP_000845123.1;transl_table=11 NZ_PYJW01000167.1 RefSeq gene 5139 6590 . - . ID=gene-C9E95_RS19590;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=C9E95_RS19590;old_locus_tag=C9E95_20070 NZ_PYJW01000167.1 Protein Homology CDS 5139 6590 . - 0 ID=cds-WP_080203980.1;Parent=gene-C9E95_RS19590;Dbxref=GenBank:WP_080203980.1;Name=WP_080203980.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=C9E95_RS19590;product=ATPase RavA stimulator ViaA;protein_id=WP_080203980.1;transl_table=11 NZ_PYJW01000167.1 RefSeq gene 6584 8080 . - . ID=gene-C9E95_RS19595;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=C9E95_RS19595;old_locus_tag=C9E95_20075 NZ_PYJW01000167.1 Protein Homology CDS 6584 8080 . - 0 ID=cds-WP_000940991.1;Parent=gene-C9E95_RS19595;Dbxref=GenBank:WP_000940991.1;Name=WP_000940991.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462778.1;locus_tag=C9E95_RS19595;product=ATPase RavA;protein_id=WP_000940991.1;transl_table=11 NZ_PYJW01000167.1 RefSeq gene 8428 10296 . + . ID=gene-C9E95_RS19600;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=C9E95_RS19600;old_locus_tag=C9E95_20080 NZ_PYJW01000167.1 Protein Homology CDS 8428 10296 . + 0 ID=cds-WP_000102338.1;Parent=gene-C9E95_RS19600;Dbxref=GenBank:WP_000102338.1;Name=WP_000102338.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=C9E95_RS19600;product=low affinity potassium transporter Kup;protein_id=WP_000102338.1;transl_table=11 NZ_PYJW01000167.1 RefSeq gene 10514 10933 . + . ID=gene-C9E95_RS19605;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=C9E95_RS19605;old_locus_tag=C9E95_20085 NZ_PYJW01000167.1 Protein Homology CDS 10514 10933 . + 0 ID=cds-WP_000715945.1;Parent=gene-C9E95_RS19605;Dbxref=GenBank:WP_000715945.1;Name=WP_000715945.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462780.1;locus_tag=C9E95_RS19605;product=D-ribose pyranase;protein_id=WP_000715945.1;transl_table=11 NZ_PYJW01000167.1 RefSeq gene 10941 12446 . + . ID=gene-C9E95_RS19610;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=C9E95_RS19610;old_locus_tag=C9E95_20090 NZ_PYJW01000167.1 Protein Homology CDS 10941 12446 . + 0 ID=cds-WP_023993766.1;Parent=gene-C9E95_RS19610;Dbxref=GenBank:WP_023993766.1;Name=WP_023993766.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462781.1;locus_tag=C9E95_RS19610;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_023993766.1;transl_table=11 NZ_PYJW01000167.1 RefSeq gene 12452 13417 . + . ID=gene-C9E95_RS19615;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=C9E95_RS19615;old_locus_tag=C9E95_20095 NZ_PYJW01000167.1 Protein Homology CDS 12452 13417 . + 0 ID=cds-WP_000211345.1;Parent=gene-C9E95_RS19615;Dbxref=GenBank:WP_000211345.1;Name=WP_000211345.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=C9E95_RS19615;product=ribose ABC transporter permease;protein_id=WP_000211345.1;transl_table=11 NZ_PYJW01000167.1 RefSeq gene 13442 14332 . + . ID=gene-C9E95_RS19620;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=C9E95_RS19620;old_locus_tag=C9E95_20100 NZ_PYJW01000167.1 Protein Homology CDS 13442 14332 . + 0 ID=cds-WP_001056260.1;Parent=gene-C9E95_RS19620;Dbxref=GenBank:WP_001056260.1;Name=WP_001056260.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462783.1;locus_tag=C9E95_RS19620;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_001056260.1;transl_table=11 NZ_PYJW01000167.1 RefSeq gene 14465 15394 . + . ID=gene-C9E95_RS19625;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=C9E95_RS19625;old_locus_tag=C9E95_20105 NZ_PYJW01000167.1 Protein Homology CDS 14465 15394 . + 0 ID=cds-WP_023993765.1;Parent=gene-C9E95_RS19625;Dbxref=GenBank:WP_023993765.1;Name=WP_023993765.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462784.1;locus_tag=C9E95_RS19625;product=ribokinase;protein_id=WP_023993765.1;transl_table=11 NZ_PYJW01000167.1 RefSeq gene 15398 16396 . + . ID=gene-C9E95_RS19630;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=C9E95_RS19630;old_locus_tag=C9E95_20110 NZ_PYJW01000167.1 Protein Homology CDS 15398 16396 . + 0 ID=cds-WP_000224491.1;Parent=gene-C9E95_RS19630;Dbxref=GenBank:WP_000224491.1;Name=WP_000224491.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462785.1;locus_tag=C9E95_RS19630;product=ribose operon transcriptional repressor RbsR;protein_id=WP_000224491.1;transl_table=11 NZ_PYJW01000167.1 RefSeq gene 16362 17789 . - . ID=gene-C9E95_RS19635;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=C9E95_RS19635;old_locus_tag=C9E95_20115 NZ_PYJW01000167.1 Protein Homology CDS 16362 17789 . - 0 ID=cds-WP_000202072.1;Parent=gene-C9E95_RS19635;Dbxref=GenBank:WP_000202072.1;Name=WP_000202072.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462786.1;locus_tag=C9E95_RS19635;product=multidrug transporter subunit MdtD;protein_id=WP_000202072.1;transl_table=11 NZ_PYJW01000167.1 RefSeq gene 17801 18505 . - . ID=gene-C9E95_RS19640;Name=C9E95_RS19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS19640;old_locus_tag=C9E95_20120 NZ_PYJW01000167.1 Protein Homology CDS 17801 18505 . - 0 ID=cds-WP_001131144.1;Parent=gene-C9E95_RS19640;Dbxref=GenBank:WP_001131144.1;Name=WP_001131144.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462787.1;locus_tag=C9E95_RS19640;product=FadR/GntR family transcriptional regulator;protein_id=WP_001131144.1;transl_table=11 ##sequence-region NZ_PYJW01000079.1 1 18168 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000079.1 RefSeq region 1 18168 . + . ID=NZ_PYJW01000079.1:1..18168;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000079.1 RefSeq gene 189 356 . + . ID=gene-C9E95_RS08115;Name=C9E95_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08115;old_locus_tag=C9E95_08295 NZ_PYJW01000079.1 Protein Homology CDS 189 356 . + 0 ID=cds-WP_001273663.1;Parent=gene-C9E95_RS08115;Dbxref=GenBank:WP_001273663.1;Name=WP_001273663.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460093.1;locus_tag=C9E95_RS08115;product=general stress protein;protein_id=WP_001273663.1;transl_table=11 NZ_PYJW01000079.1 RefSeq gene 493 1131 . + . ID=gene-C9E95_RS08120;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=C9E95_RS08120;old_locus_tag=C9E95_08300 NZ_PYJW01000079.1 Protein Homology CDS 493 1131 . + 0 ID=cds-WP_000083128.1;Parent=gene-C9E95_RS08120;Dbxref=GenBank:WP_000083128.1;Name=WP_000083128.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460094.1;locus_tag=C9E95_RS08120;product=HTH-type transcriptional regulator RutR;protein_id=WP_000083128.1;transl_table=11 NZ_PYJW01000079.1 RefSeq gene 1128 1523 . - . ID=gene-C9E95_RS08125;Name=C9E95_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08125;old_locus_tag=C9E95_08305 NZ_PYJW01000079.1 Protein Homology CDS 1128 1523 . - 0 ID=cds-WP_080203876.1;Parent=gene-C9E95_RS08125;Dbxref=GenBank:WP_080203876.1;Name=WP_080203876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008320276.1;locus_tag=C9E95_RS08125;product=lysozyme inhibitor LprI family protein;protein_id=WP_080203876.1;transl_table=11 NZ_PYJW01000079.1 RefSeq gene 1582 5544 . - . ID=gene-C9E95_RS08130;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=C9E95_RS08130;old_locus_tag=C9E95_08310 NZ_PYJW01000079.1 Protein Homology CDS 1582 5544 . - 0 ID=cds-WP_080203877.1;Parent=gene-C9E95_RS08130;Dbxref=GenBank:WP_080203877.1;Name=WP_080203877.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447555.1;locus_tag=C9E95_RS08130;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_080203877.1;transl_table=11 NZ_PYJW01000079.1 RefSeq gene 5966 7474 . + . ID=gene-C9E95_RS08135;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=C9E95_RS08135;old_locus_tag=C9E95_08320 NZ_PYJW01000079.1 Protein Homology CDS 5966 7474 . + 0 ID=cds-WP_001018463.1;Parent=gene-C9E95_RS08135;Dbxref=GenBank:WP_001018463.1;Name=WP_001018463.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460097.1;locus_tag=C9E95_RS08135;product=sodium/proline symporter PutP;protein_id=WP_001018463.1;transl_table=11 NZ_PYJW01000079.1 RefSeq gene 8367 9155 . + . ID=gene-C9E95_RS08140;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=C9E95_RS08140;old_locus_tag=C9E95_08330 NZ_PYJW01000079.1 Protein Homology CDS 8367 9155 . + 0 ID=cds-WP_000533527.1;Parent=gene-C9E95_RS08140;Dbxref=GenBank:WP_000533527.1;Name=WP_000533527.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=C9E95_RS08140;product=phosphate starvation-inducible protein PhoH;protein_id=WP_000533527.1;transl_table=11 NZ_PYJW01000079.1 RefSeq gene 9261 10142 . - . ID=gene-C9E95_RS08145;Name=C9E95_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08145;old_locus_tag=C9E95_08335 NZ_PYJW01000079.1 Protein Homology CDS 9261 10142 . - 0 ID=cds-WP_000433673.1;Parent=gene-C9E95_RS08145;Dbxref=GenBank:WP_000433673.1;Name=WP_000433673.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460099.1;locus_tag=C9E95_RS08145;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000433673.1;transl_table=11 NZ_PYJW01000079.1 RefSeq gene 10428 11924 . - . ID=gene-C9E95_RS08150;Name=C9E95_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08150;old_locus_tag=C9E95_08340 NZ_PYJW01000079.1 Protein Homology CDS 10428 11924 . - 0 ID=cds-WP_000628085.1;Parent=gene-C9E95_RS08150;Dbxref=GenBank:WP_000628085.1;Name=WP_000628085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460100.1;locus_tag=C9E95_RS08150;product=sodium:solute symporter;protein_id=WP_000628085.1;transl_table=11 NZ_PYJW01000079.1 RefSeq gene 12253 12933 . - . ID=gene-C9E95_RS08155;Name=C9E95_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08155;old_locus_tag=C9E95_08350 NZ_PYJW01000079.1 Protein Homology CDS 12253 12933 . - 0 ID=cds-WP_001535983.1;Parent=gene-C9E95_RS08155;Dbxref=GenBank:WP_001535983.1;Name=WP_001535983.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460101.1;locus_tag=C9E95_RS08155;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_001535983.1;transl_table=11 NZ_PYJW01000079.1 RefSeq gene 13439 14593 . + . ID=gene-C9E95_RS08160;Name=C9E95_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08160;old_locus_tag=C9E95_08355 NZ_PYJW01000079.1 Protein Homology CDS 13439 14593 . + 0 ID=cds-WP_000525761.1;Parent=gene-C9E95_RS08160;Dbxref=GenBank:WP_000525761.1;Name=WP_000525761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460102.1;locus_tag=C9E95_RS08160;product=N-acetylneuraminate epimerase;protein_id=WP_000525761.1;transl_table=11 NZ_PYJW01000079.1 RefSeq gene 14639 15331 . + . ID=gene-C9E95_RS08165;Name=C9E95_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08165;old_locus_tag=C9E95_08360 NZ_PYJW01000079.1 Protein Homology CDS 14639 15331 . + 0 ID=cds-WP_135369831.1;Parent=gene-C9E95_RS08165;Dbxref=GenBank:WP_135369831.1;Name=WP_135369831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460103.1;locus_tag=C9E95_RS08165;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_135369831.1;transl_table=11 NZ_PYJW01000079.1 RefSeq gene 15614 16894 . + . ID=gene-C9E95_RS08170;Name=C9E95_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08170;old_locus_tag=C9E95_08365 NZ_PYJW01000079.1 Protein Homology CDS 15614 16894 . + 0 ID=cds-WP_000560758.1;Parent=gene-C9E95_RS08170;Dbxref=GenBank:WP_000560758.1;Name=WP_000560758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460104.1;locus_tag=C9E95_RS08170;product=MFS transporter;protein_id=WP_000560758.1;transl_table=11 NZ_PYJW01000079.1 RefSeq gene 16905 18011 . + . ID=gene-C9E95_RS08175;Name=C9E95_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08175;old_locus_tag=C9E95_08370 NZ_PYJW01000079.1 Protein Homology CDS 16905 18011 . + 0 ID=cds-WP_000988589.1;Parent=gene-C9E95_RS08175;Dbxref=GenBank:WP_000988589.1;Name=WP_000988589.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460105.1;locus_tag=C9E95_RS08175;product=Gfo/Idh/MocA family protein;protein_id=WP_000988589.1;transl_table=11 ##sequence-region NZ_PYJW01000057.1 1 100666 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000057.1 RefSeq region 1 100666 . + . ID=NZ_PYJW01000057.1:1..100666;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000057.1 RefSeq gene 167 1537 . - . ID=gene-C9E95_RS04940;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=C9E95_RS04940;old_locus_tag=C9E95_05060 NZ_PYJW01000057.1 Protein Homology CDS 167 1537 . - 0 ID=cds-WP_135369823.1;Parent=gene-C9E95_RS04940;Dbxref=GenBank:WP_135369823.1;Name=WP_135369823.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441794.1;locus_tag=C9E95_RS04940;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WP_135369823.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 1648 3090 . - . ID=gene-C9E95_RS04945;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=C9E95_RS04945;old_locus_tag=C9E95_05065 NZ_PYJW01000057.1 Protein Homology CDS 1648 3090 . - 0 ID=cds-WP_135369824.1;Parent=gene-C9E95_RS04945;Dbxref=GenBank:WP_135369824.1;Name=WP_135369824.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461050.3;locus_tag=C9E95_RS04945;product=mannose-1-phosphate guanyltransferase;protein_id=WP_135369824.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 3087 4310 . - . ID=gene-C9E95_RS04950;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=C9E95_RS04950;old_locus_tag=C9E95_05070 NZ_PYJW01000057.1 Protein Homology CDS 3087 4310 . - 0 ID=cds-WP_023993374.1;Parent=gene-C9E95_RS04950;Dbxref=GenBank:WP_023993374.1;Name=WP_023993374.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461051.1;locus_tag=C9E95_RS04950;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WP_023993374.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 4307 4780 . - . ID=gene-C9E95_RS04955;Name=C9E95_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04955;old_locus_tag=C9E95_05075 NZ_PYJW01000057.1 Protein Homology CDS 4307 4780 . - 0 ID=cds-WP_023138394.1;Parent=gene-C9E95_RS04955;Dbxref=GenBank:WP_023138394.1;Name=WP_023138394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526160.1;locus_tag=C9E95_RS04955;product=GDP-mannose mannosyl hydrolase;protein_id=WP_023138394.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 4783 5748 . - . ID=gene-C9E95_RS04960;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=C9E95_RS04960;old_locus_tag=C9E95_05080 NZ_PYJW01000057.1 Protein Homology CDS 4783 5748 . - 0 ID=cds-WP_001041704.1;Parent=gene-C9E95_RS04960;Dbxref=GenBank:WP_001041704.1;Name=WP_001041704.1;Ontology_term=GO:0042351,GO:0016853,GO:0050577;gbkey=CDS;gene=fcl;go_function=isomerase activity|0016853||IEA,GDP-L-fucose synthase activity|0050577||IEA;go_process='de novo' GDP-L-fucose biosynthetic process|0042351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461053.1;locus_tag=C9E95_RS04960;product=GDP-L-fucose synthase;protein_id=WP_001041704.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 5751 6872 . - . ID=gene-C9E95_RS04965;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=C9E95_RS04965;old_locus_tag=C9E95_05085 NZ_PYJW01000057.1 Protein Homology CDS 5751 6872 . - 0 ID=cds-WP_023993375.1;Parent=gene-C9E95_RS04965;Dbxref=GenBank:WP_023993375.1;Name=WP_023993375.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=C9E95_RS04965;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_023993375.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 6896 7450 . - . ID=gene-C9E95_RS04970;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=C9E95_RS04970;old_locus_tag=C9E95_05090 NZ_PYJW01000057.1 Protein Homology CDS 6896 7450 . - 0 ID=cds-WP_001153603.1;Parent=gene-C9E95_RS04970;Dbxref=GenBank:WP_001153603.1;Name=WP_001153603.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461055.1;locus_tag=C9E95_RS04970;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WP_001153603.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 7466 8212 . - . ID=gene-C9E95_RS04975;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=C9E95_RS04975;old_locus_tag=C9E95_05095 NZ_PYJW01000057.1 Protein Homology CDS 7466 8212 . - 0 ID=cds-WP_000480134.1;Parent=gene-C9E95_RS04975;Dbxref=GenBank:WP_000480134.1;Name=WP_000480134.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461056.1;locus_tag=C9E95_RS04975;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WP_000480134.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 8225 9439 . - . ID=gene-C9E95_RS04980;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=C9E95_RS04980;old_locus_tag=C9E95_05100 NZ_PYJW01000057.1 Protein Homology CDS 8225 9439 . - 0 ID=cds-WP_000091392.1;Parent=gene-C9E95_RS04980;Dbxref=GenBank:WP_000091392.1;Name=WP_000091392.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461057.1;locus_tag=C9E95_RS04980;product=colanic acid polymerase WcaD;protein_id=WP_000091392.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 9414 10631 . - . ID=gene-C9E95_RS04985;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=C9E95_RS04985;old_locus_tag=C9E95_05105 NZ_PYJW01000057.1 Protein Homology CDS 9414 10631 . - 0 ID=cds-WP_017466013.1;Parent=gene-C9E95_RS04985;Dbxref=GenBank:WP_017466013.1;Name=WP_017466013.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461058.1;locus_tag=C9E95_RS04985;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WP_017466013.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 10628 11116 . - . ID=gene-C9E95_RS04990;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=C9E95_RS04990;old_locus_tag=C9E95_05110 NZ_PYJW01000057.1 Protein Homology CDS 10628 11116 . - 0 ID=cds-WP_000888724.1;Parent=gene-C9E95_RS04990;Dbxref=GenBank:WP_000888724.1;Name=WP_000888724.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461059.1;locus_tag=C9E95_RS04990;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WP_000888724.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 11119 11961 . - . ID=gene-C9E95_RS04995;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=C9E95_RS04995;old_locus_tag=C9E95_05115 NZ_PYJW01000057.1 Protein Homology CDS 11119 11961 . - 0 ID=cds-WP_000205695.1;Parent=gene-C9E95_RS04995;Dbxref=GenBank:WP_000205695.1;Name=WP_000205695.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=C9E95_RS04995;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WP_000205695.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 12048 14207 . - . ID=gene-C9E95_RS05000;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=C9E95_RS05000;old_locus_tag=C9E95_05120 NZ_PYJW01000057.1 Protein Homology CDS 12048 14207 . - 0 ID=cds-WP_023993376.1;Parent=gene-C9E95_RS05000;Dbxref=GenBank:WP_023993376.1;Name=WP_023993376.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461061.1;locus_tag=C9E95_RS05000;product=tyrosine-protein kinase Wzc;protein_id=WP_023993376.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 14204 14653 . - . ID=gene-C9E95_RS05005;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=C9E95_RS05005;old_locus_tag=C9E95_05125 NZ_PYJW01000057.1 Protein Homology CDS 14204 14653 . - 0 ID=cds-WP_000482224.1;Parent=gene-C9E95_RS05005;Dbxref=GenBank:WP_000482224.1;Name=WP_000482224.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461062.1;locus_tag=C9E95_RS05005;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_000482224.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 14659 15798 . - . ID=gene-C9E95_RS05010;Name=C9E95_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05010;old_locus_tag=C9E95_05130 NZ_PYJW01000057.1 Protein Homology CDS 14659 15798 . - 0 ID=cds-WP_000978077.1;Parent=gene-C9E95_RS05010;Dbxref=GenBank:WP_000978077.1;Name=WP_000978077.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=C9E95_RS05010;product=polysaccharide export protein;protein_id=WP_000978077.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 16473 18053 . + . ID=gene-C9E95_RS05015;Name=C9E95_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05015;old_locus_tag=C9E95_05140 NZ_PYJW01000057.1 Protein Homology CDS 16473 18053 . + 0 ID=cds-WP_000454713.1;Parent=gene-C9E95_RS05015;Dbxref=GenBank:WP_000454713.1;Name=WP_000454713.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461064.1;locus_tag=C9E95_RS05015;product=TerC family protein;protein_id=WP_000454713.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 18139 19995 . - . ID=gene-C9E95_RS05020;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=C9E95_RS05020;old_locus_tag=C9E95_05145 NZ_PYJW01000057.1 Protein Homology CDS 18139 19995 . - 0 ID=cds-WP_023206604.1;Parent=gene-C9E95_RS05020;Dbxref=GenBank:WP_023206604.1;Name=WP_023206604.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461065.1;locus_tag=C9E95_RS05020;product=outer membrane assembly protein AsmA;protein_id=WP_023206604.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 20034 20615 . - . ID=gene-C9E95_RS05025;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=C9E95_RS05025;old_locus_tag=C9E95_05150 NZ_PYJW01000057.1 Protein Homology CDS 20034 20615 . - 0 ID=cds-WP_001234783.1;Parent=gene-C9E95_RS05025;Dbxref=GenBank:WP_001234783.1;Name=WP_001234783.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=C9E95_RS05025;product=dCTP deaminase;protein_id=WP_001234783.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 20706 21347 . - . ID=gene-C9E95_RS05030;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=C9E95_RS05030;old_locus_tag=C9E95_05155 NZ_PYJW01000057.1 Protein Homology CDS 20706 21347 . - 0 ID=cds-WP_000132082.1;Parent=gene-C9E95_RS05030;Dbxref=GenBank:WP_000132082.1;Name=WP_000132082.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461067.1;locus_tag=C9E95_RS05030;product=uridine kinase;protein_id=WP_000132082.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 21678 24668 . + . ID=gene-C9E95_RS05035;Name=C9E95_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05035;old_locus_tag=C9E95_05160 NZ_PYJW01000057.1 Protein Homology CDS 21678 24668 . + 0 ID=cds-WP_080203696.1;Parent=gene-C9E95_RS05035;Dbxref=GenBank:WP_080203696.1;Name=WP_080203696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461068.1;locus_tag=C9E95_RS05035;product=MASE1 domain-containing protein;protein_id=WP_080203696.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 24636 25505 . - . ID=gene-C9E95_RS05040;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=C9E95_RS05040;old_locus_tag=C9E95_05165 NZ_PYJW01000057.1 Protein Homology CDS 24636 25505 . - 0 ID=cds-WP_080203697.1;Parent=gene-C9E95_RS05040;Dbxref=GenBank:WP_080203697.1;Name=WP_080203697.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461069.1;locus_tag=C9E95_RS05040;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_080203697.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 25639 26991 . + . ID=gene-C9E95_RS05045;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=C9E95_RS05045;old_locus_tag=C9E95_05175 NZ_PYJW01000057.1 Protein Homology CDS 25639 26991 . + 0 ID=cds-WP_000469637.1;Parent=gene-C9E95_RS05045;Dbxref=GenBank:WP_000469637.1;Name=WP_000469637.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461070.1;locus_tag=C9E95_RS05045;product=molecular chaperone;protein_id=WP_000469637.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 27090 27149 . - . ID=gene-C9E95_RS05050;Name=ibsA;gbkey=Gene;gene=ibsA;gene_biotype=protein_coding;locus_tag=C9E95_RS05050;old_locus_tag=C9E95_05180 NZ_PYJW01000057.1 Protein Homology CDS 27090 27149 . - 0 ID=cds-WP_001805500.1;Parent=gene-C9E95_RS05050;Dbxref=GenBank:WP_001805500.1;Name=WP_001805500.1;gbkey=CDS;gene=ibsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=C9E95_RS05050;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001805500.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 27432 28673 . + . ID=gene-C9E95_RS05055;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=C9E95_RS05055;old_locus_tag=C9E95_05185 NZ_PYJW01000057.1 Protein Homology CDS 27432 28673 . + 0 ID=cds-WP_023993379.1;Parent=gene-C9E95_RS05055;Dbxref=GenBank:WP_023993379.1;Name=WP_023993379.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461071.1;locus_tag=C9E95_RS05055;product=multidrug efflux RND transporter subunit MdtA;protein_id=WP_023993379.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 28673 31795 . + . ID=gene-C9E95_RS05060;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=C9E95_RS05060;old_locus_tag=C9E95_05190 NZ_PYJW01000057.1 Protein Homology CDS 28673 31795 . + 0 ID=cds-WP_080219697.1;Parent=gene-C9E95_RS05060;Dbxref=GenBank:WP_080219697.1;Name=WP_080219697.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461072.1;locus_tag=C9E95_RS05060;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WP_080219697.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 31796 34876 . + . ID=gene-C9E95_RS05065;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=C9E95_RS05065;old_locus_tag=C9E95_05195 NZ_PYJW01000057.1 Protein Homology CDS 31796 34876 . + 0 ID=cds-WP_080203699.1;Parent=gene-C9E95_RS05065;Dbxref=GenBank:WP_080203699.1;Name=WP_080203699.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461073.1;locus_tag=C9E95_RS05065;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_080203699.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 34873 36285 . + . ID=gene-C9E95_RS05070;Name=C9E95_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05070;old_locus_tag=C9E95_05200 NZ_PYJW01000057.1 Protein Homology CDS 34873 36285 . + 0 ID=cds-WP_023993382.1;Parent=gene-C9E95_RS05070;Dbxref=GenBank:WP_023993382.1;Name=WP_023993382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461074.1;locus_tag=C9E95_RS05070;product=MFS transporter;protein_id=WP_023993382.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 36285 37688 . + . ID=gene-C9E95_RS05075;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=C9E95_RS05075;old_locus_tag=C9E95_05205 NZ_PYJW01000057.1 Protein Homology CDS 36285 37688 . + 0 ID=cds-WP_000870073.1;Parent=gene-C9E95_RS05075;Dbxref=GenBank:WP_000870073.1;Name=WP_000870073.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461075.1;locus_tag=C9E95_RS05075;product=two-component system sensor histidine kinase BaeS;protein_id=WP_000870073.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 37685 38407 . + . ID=gene-C9E95_RS05080;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=C9E95_RS05080;old_locus_tag=C9E95_05210 NZ_PYJW01000057.1 Protein Homology CDS 37685 38407 . + 0 ID=cds-WP_000137854.1;Parent=gene-C9E95_RS05080;Dbxref=GenBank:WP_000137854.1;Name=WP_000137854.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461076.1;locus_tag=C9E95_RS05080;product=two-component system response regulator BaeR;protein_id=WP_000137854.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 38676 39878 . + . ID=gene-C9E95_RS05090;Name=C9E95_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05090;old_locus_tag=C9E95_05220 NZ_PYJW01000057.1 Protein Homology CDS 38676 39878 . + 0 ID=cds-WP_000141061.1;Parent=gene-C9E95_RS05090;Dbxref=GenBank:WP_000141061.1;Name=WP_000141061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141078.1;locus_tag=C9E95_RS05090;product=hypothetical protein;protein_id=WP_000141061.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 39878 40594 . + . ID=gene-C9E95_RS05095;Name=C9E95_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05095;old_locus_tag=C9E95_05225 NZ_PYJW01000057.1 Protein Homology CDS 39878 40594 . + 0 ID=cds-WP_000498587.1;Parent=gene-C9E95_RS05095;Dbxref=GenBank:WP_000498587.1;Name=WP_000498587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461078.1;locus_tag=C9E95_RS05095;product=DUF1266 domain-containing protein;protein_id=WP_000498587.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 40605 42716 . + . ID=gene-C9E95_RS05100;Name=C9E95_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05100;old_locus_tag=C9E95_05230 NZ_PYJW01000057.1 Protein Homology CDS 40605 42716 . + 0 ID=cds-WP_023993384.1;Parent=gene-C9E95_RS05100;Dbxref=GenBank:WP_023993384.1;Name=WP_023993384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=C9E95_RS05100;product=DUF4034 domain-containing protein;protein_id=WP_023993384.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 42832 44193 . + . ID=gene-C9E95_RS05105;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=C9E95_RS05105;old_locus_tag=C9E95_05235 NZ_PYJW01000057.1 Protein Homology CDS 42832 44193 . + 0 ID=cds-WP_001517981.1;Parent=gene-C9E95_RS05105;Dbxref=GenBank:WP_001517981.1;Name=WP_001517981.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461080.1;locus_tag=C9E95_RS05105;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_001517981.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 44644 45690 . + . ID=gene-C9E95_RS05110;Name=sseK2;gbkey=Gene;gene=sseK2;gene_biotype=protein_coding;locus_tag=C9E95_RS05110;old_locus_tag=C9E95_05240 NZ_PYJW01000057.1 Protein Homology CDS 44644 45690 . + 0 ID=cds-WP_023994319.1;Parent=gene-C9E95_RS05110;Dbxref=GenBank:WP_023994319.1;Name=WP_023994319.1;gbkey=CDS;gene=sseK2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461081.1;locus_tag=C9E95_RS05110;product=type III secretion system effector arginine glycosyltransferase SseK2;protein_id=WP_023994319.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 45726 46142 . - . ID=gene-C9E95_RS05115;Name=C9E95_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05115;old_locus_tag=C9E95_05245 NZ_PYJW01000057.1 Protein Homology CDS 45726 46142 . - 0 ID=cds-WP_001540404.1;Parent=gene-C9E95_RS05115;Dbxref=GenBank:WP_001540404.1;Name=WP_001540404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461082.1;locus_tag=C9E95_RS05115;product=CesT family type III secretion system chaperone;protein_id=WP_001540404.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 46264 46599 . - . ID=gene-C9E95_RS05120;Name=steD;gbkey=Gene;gene=steD;gene_biotype=protein_coding;locus_tag=C9E95_RS05120;old_locus_tag=C9E95_05250 NZ_PYJW01000057.1 Protein Homology CDS 46264 46599 . - 0 ID=cds-WP_001533113.1;Parent=gene-C9E95_RS05120;Dbxref=GenBank:WP_001533113.1;Name=WP_001533113.1;gbkey=CDS;gene=steD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461083.1;locus_tag=C9E95_RS05120;product=type III secretion system effector SteD;protein_id=WP_001533113.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 47161 48060 . + . ID=gene-C9E95_RS05125;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=C9E95_RS05125;old_locus_tag=C9E95_05255 NZ_PYJW01000057.1 Protein Homology CDS 47161 48060 . + 0 ID=cds-WP_001273393.1;Parent=gene-C9E95_RS05125;Dbxref=GenBank:WP_001273393.1;Name=WP_001273393.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461084.1;locus_tag=C9E95_RS05125;product=lipid kinase YegS;protein_id=WP_001273393.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 48113 49165 . - . ID=gene-C9E95_RS05130;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=C9E95_RS05130;old_locus_tag=C9E95_05260 NZ_PYJW01000057.1 Protein Homology CDS 48113 49165 . - 0 ID=cds-WP_000129590.1;Parent=gene-C9E95_RS05130;Dbxref=GenBank:WP_000129590.1;Name=WP_000129590.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=C9E95_RS05130;product=class I fructose-bisphosphate aldolase;protein_id=WP_000129590.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 49419 50690 . + . ID=gene-C9E95_RS05135;Name=C9E95_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05135;old_locus_tag=C9E95_05265 NZ_PYJW01000057.1 Protein Homology CDS 49419 50690 . + 0 ID=cds-WP_000858692.1;Parent=gene-C9E95_RS05135;Dbxref=GenBank:WP_000858692.1;Name=WP_000858692.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461086.1;locus_tag=C9E95_RS05135;product=nucleoside permease;protein_id=WP_000858692.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 50687 51691 . + . ID=gene-C9E95_RS05140;Name=C9E95_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05140;old_locus_tag=C9E95_05270 NZ_PYJW01000057.1 Protein Homology CDS 50687 51691 . + 0 ID=cds-WP_000642793.1;Parent=gene-C9E95_RS05140;Dbxref=GenBank:WP_000642793.1;Name=WP_000642793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461087.1;locus_tag=C9E95_RS05140;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000642793.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 51688 52653 . + . ID=gene-C9E95_RS05145;Name=C9E95_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05145;old_locus_tag=C9E95_05275 NZ_PYJW01000057.1 Protein Homology CDS 51688 52653 . + 0 ID=cds-WP_080203700.1;Parent=gene-C9E95_RS05145;Dbxref=GenBank:WP_080203700.1;Name=WP_080203700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461088.1;locus_tag=C9E95_RS05145;product=PfkB family carbohydrate kinase;protein_id=WP_080203700.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 52627 53373 . - . ID=gene-C9E95_RS05150;Name=C9E95_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05150;old_locus_tag=C9E95_05280 NZ_PYJW01000057.1 Protein Homology CDS 52627 53373 . - 0 ID=cds-WP_000434062.1;Parent=gene-C9E95_RS05150;Dbxref=GenBank:WP_000434062.1;Name=WP_000434062.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461089.1;locus_tag=C9E95_RS05150;product=GntR family transcriptional regulator;protein_id=WP_000434062.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 53409 54209 . - . ID=gene-C9E95_RS05155;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=C9E95_RS05155;old_locus_tag=C9E95_05285 NZ_PYJW01000057.1 Protein Homology CDS 53409 54209 . - 0 ID=cds-WP_001528513.1;Parent=gene-C9E95_RS05155;Dbxref=GenBank:WP_001528513.1;Name=WP_001528513.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461090.1;locus_tag=C9E95_RS05155;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_001528513.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 54196 54993 . - . ID=gene-C9E95_RS05160;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=C9E95_RS05160;old_locus_tag=C9E95_05290 NZ_PYJW01000057.1 Protein Homology CDS 54196 54993 . - 0 ID=cds-WP_080203701.1;Parent=gene-C9E95_RS05160;Dbxref=GenBank:WP_080203701.1;Name=WP_080203701.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461091.1;locus_tag=C9E95_RS05160;product=hydroxyethylthiazole kinase;protein_id=WP_080203701.1;transl_table=11 NZ_PYJW01000057.1 cmsearch riboswitch 55025 55121 . - . ID=id-NZ_PYJW01000057.1:55025..55121;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PYJW01000057.1 RefSeq gene 55403 55717 . + . ID=gene-C9E95_RS05165;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=C9E95_RS05165;old_locus_tag=C9E95_05295 NZ_PYJW01000057.1 Protein Homology CDS 55403 55717 . + 0 ID=cds-WP_000837534.1;Parent=gene-C9E95_RS05165;Dbxref=GenBank:WP_000837534.1;Name=WP_000837534.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461092.1;locus_tag=C9E95_RS05165;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WP_000837534.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 55759 56766 . - . ID=gene-C9E95_RS05170;Name=C9E95_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05170;old_locus_tag=C9E95_05300 NZ_PYJW01000057.1 Protein Homology CDS 55759 56766 . - 0 ID=cds-WP_023993388.1;Parent=gene-C9E95_RS05170;Dbxref=GenBank:WP_023993388.1;Name=WP_023993388.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001269814.1;locus_tag=C9E95_RS05170;product=fimbrial protein;protein_id=WP_023993388.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 56775 59255 . - . ID=gene-C9E95_RS05175;Name=C9E95_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05175;old_locus_tag=C9E95_05305 NZ_PYJW01000057.1 Protein Homology CDS 56775 59255 . - 0 ID=cds-WP_000945356.1;Parent=gene-C9E95_RS05175;Dbxref=GenBank:WP_000945356.1;Name=WP_000945356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310942.1;locus_tag=C9E95_RS05175;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_000945356.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 59268 59948 . - . ID=gene-C9E95_RS05180;Name=C9E95_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05180;old_locus_tag=C9E95_05310 NZ_PYJW01000057.1 Protein Homology CDS 59268 59948 . - 0 ID=cds-WP_000734580.1;Parent=gene-C9E95_RS05180;Dbxref=GenBank:WP_000734580.1;Name=WP_000734580.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734581.1;locus_tag=C9E95_RS05180;product=fimbria/pilus periplasmic chaperone;protein_id=WP_000734580.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 59995 60540 . - . ID=gene-C9E95_RS05185;Name=C9E95_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05185;old_locus_tag=C9E95_05315 NZ_PYJW01000057.1 Protein Homology CDS 59995 60540 . - 0 ID=cds-WP_023993389.1;Parent=gene-C9E95_RS05185;Dbxref=GenBank:WP_023993389.1;Name=WP_023993389.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830494.1;locus_tag=C9E95_RS05185;product=fimbrial protein;protein_id=WP_023993389.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 60819 61100 . - . ID=gene-C9E95_RS05190;Name=C9E95_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05190;old_locus_tag=C9E95_05320 NZ_PYJW01000057.1 Protein Homology CDS 60819 61100 . - 0 ID=cds-WP_001543027.1;Parent=gene-C9E95_RS05190;Dbxref=GenBank:WP_001543027.1;Name=WP_001543027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000760407.1;locus_tag=C9E95_RS05190;product=DUF2574 family protein;protein_id=WP_001543027.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 61367 62476 . - . ID=gene-C9E95_RS05195;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=C9E95_RS05195;old_locus_tag=C9E95_05325 NZ_PYJW01000057.1 Protein Homology CDS 61367 62476 . - 0 ID=cds-WP_001005426.1;Parent=gene-C9E95_RS05195;Dbxref=GenBank:WP_001005426.1;Name=WP_001005426.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461098.1;locus_tag=C9E95_RS05195;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_001005426.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 62641 64674 . + . ID=gene-C9E95_RS05200;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=C9E95_RS05200;old_locus_tag=C9E95_05330 NZ_PYJW01000057.1 Protein Homology CDS 62641 64674 . + 0 ID=cds-WP_135369825.1;Parent=gene-C9E95_RS05200;Dbxref=GenBank:WP_135369825.1;Name=WP_135369825.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461099.1;locus_tag=C9E95_RS05200;product=methionine--tRNA ligase;protein_id=WP_135369825.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 64915 65373 . + . ID=gene-C9E95_RS05205;Name=C9E95_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05205;old_locus_tag=C9E95_05335 NZ_PYJW01000057.1 Protein Homology CDS 64915 65373 . + 0 ID=cds-WP_000703137.1;Parent=gene-C9E95_RS05205;Dbxref=GenBank:WP_000703137.1;Name=WP_000703137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461100.1;locus_tag=C9E95_RS05205;product=YehR family lipoprotein;protein_id=WP_000703137.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 65545 66075 . + . ID=gene-C9E95_RS05210;Name=C9E95_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05210;old_locus_tag=C9E95_05340 NZ_PYJW01000057.1 Protein Homology CDS 65545 66075 . + 0 ID=cds-WP_001197951.1;Parent=gene-C9E95_RS05210;Dbxref=GenBank:WP_001197951.1;Name=WP_001197951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461101.1;locus_tag=C9E95_RS05210;product=YehR family lipoprotein;protein_id=WP_001197951.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 66132 66599 . - . ID=gene-C9E95_RS05215;Name=C9E95_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05215;old_locus_tag=C9E95_05345 NZ_PYJW01000057.1 Protein Homology CDS 66132 66599 . - 0 ID=cds-WP_000950413.1;Parent=gene-C9E95_RS05215;Dbxref=GenBank:WP_000950413.1;Name=WP_000950413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461102.1;locus_tag=C9E95_RS05215;product=DUF1456 family protein;protein_id=WP_000950413.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 66646 67365 . - . ID=gene-C9E95_RS05220;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=C9E95_RS05220;old_locus_tag=C9E95_05350 NZ_PYJW01000057.1 Protein Homology CDS 66646 67365 . - 0 ID=cds-WP_000598637.1;Parent=gene-C9E95_RS05220;Dbxref=GenBank:WP_000598637.1;Name=WP_000598637.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461103.1;locus_tag=C9E95_RS05220;product=two-component system response regulator BtsR;protein_id=WP_000598637.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 67362 69047 . - . ID=gene-C9E95_RS05225;Name=C9E95_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05225;old_locus_tag=C9E95_05355 NZ_PYJW01000057.1 Protein Homology CDS 67362 69047 . - 0 ID=cds-WP_000272850.1;Parent=gene-C9E95_RS05225;Dbxref=GenBank:WP_000272850.1;Name=WP_000272850.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461104.1;locus_tag=C9E95_RS05225;product=sensor histidine kinase;protein_id=WP_000272850.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 69270 70001 . + . ID=gene-C9E95_RS05230;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=C9E95_RS05230;old_locus_tag=C9E95_05360 NZ_PYJW01000057.1 Protein Homology CDS 69270 70001 . + 0 ID=cds-WP_001240418.1;Parent=gene-C9E95_RS05230;Dbxref=GenBank:WP_001240418.1;Name=WP_001240418.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461105.1;locus_tag=C9E95_RS05230;product=HTH-type transcriptional regulator MlrA;protein_id=WP_001240418.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 70061 70168 . + . ID=gene-C9E95_RS05235;Name=C9E95_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05235;old_locus_tag=C9E95_05365 NZ_PYJW01000057.1 Protein Homology CDS 70061 70168 . + 0 ID=cds-WP_023993392.1;Parent=gene-C9E95_RS05235;Dbxref=GenBank:WP_023993392.1;Name=WP_023993392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461106.1;locus_tag=C9E95_RS05235;product=protein YohO;protein_id=WP_023993392.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 70149 70880 . - . ID=gene-C9E95_RS05240;Name=C9E95_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05240;old_locus_tag=C9E95_05370 NZ_PYJW01000057.1 Protein Homology CDS 70149 70880 . - 0 ID=cds-WP_000824854.1;Parent=gene-C9E95_RS05240;Dbxref=GenBank:WP_000824854.1;Name=WP_000824854.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461107.1;locus_tag=C9E95_RS05240;product=ABC transporter permease;protein_id=WP_000824854.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 70864 71811 . - . ID=gene-C9E95_RS05245;Name=C9E95_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05245;old_locus_tag=C9E95_05375 NZ_PYJW01000057.1 Protein Homology CDS 70864 71811 . - 0 ID=cds-WP_000569166.1;Parent=gene-C9E95_RS05245;Dbxref=GenBank:WP_000569166.1;Name=WP_000569166.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461108.1;locus_tag=C9E95_RS05245;product=ABC transporter ATP-binding protein;protein_id=WP_000569166.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 71804 72973 . - . ID=gene-C9E95_RS05250;Name=C9E95_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05250;old_locus_tag=C9E95_05380 NZ_PYJW01000057.1 Protein Homology CDS 71804 72973 . - 0 ID=cds-WP_023993393.1;Parent=gene-C9E95_RS05250;Dbxref=GenBank:WP_023993393.1;Name=WP_023993393.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461109.1;locus_tag=C9E95_RS05250;product=ABC transporter permease;protein_id=WP_023993393.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 72977 73894 . - . ID=gene-C9E95_RS05255;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=C9E95_RS05255;old_locus_tag=C9E95_05385 NZ_PYJW01000057.1 Protein Homology CDS 72977 73894 . - 0 ID=cds-WP_000155876.1;Parent=gene-C9E95_RS05255;Dbxref=GenBank:WP_000155876.1;Name=WP_000155876.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461110.1;locus_tag=C9E95_RS05255;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_000155876.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 74075 76372 . - . ID=gene-C9E95_RS05260;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=C9E95_RS05260;old_locus_tag=C9E95_05390 NZ_PYJW01000057.1 Protein Homology CDS 74075 76372 . - 0 ID=cds-WP_000871554.1;Parent=gene-C9E95_RS05260;Dbxref=GenBank:WP_000871554.1;Name=WP_000871554.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461111.1;locus_tag=C9E95_RS05260;product=beta-glucosidase BglX;protein_id=WP_000871554.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 76639 78369 . + . ID=gene-C9E95_RS05265;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=C9E95_RS05265;old_locus_tag=C9E95_05395 NZ_PYJW01000057.1 Protein Homology CDS 76639 78369 . + 0 ID=cds-WP_000095234.1;Parent=gene-C9E95_RS05265;Dbxref=GenBank:WP_000095234.1;Name=WP_000095234.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461112.1;locus_tag=C9E95_RS05265;product=D-lactate dehydrogenase;protein_id=WP_000095234.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 78427 79374 . - . ID=gene-C9E95_RS05270;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=C9E95_RS05270;old_locus_tag=C9E95_05400 NZ_PYJW01000057.1 Protein Homology CDS 78427 79374 . - 0 ID=cds-WP_000911555.1;Parent=gene-C9E95_RS05270;Dbxref=GenBank:WP_000911555.1;Name=WP_000911555.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461113.1;locus_tag=C9E95_RS05270;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_000911555.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 79540 80127 . - . ID=gene-C9E95_RS05275;Name=C9E95_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05275;old_locus_tag=C9E95_05410 NZ_PYJW01000057.1 Protein Homology CDS 79540 80127 . - 0 ID=cds-WP_001017057.1;Parent=gene-C9E95_RS05275;Dbxref=GenBank:WP_001017057.1;Name=WP_001017057.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=C9E95_RS05275;product=Yip1 family protein;protein_id=WP_001017057.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 80286 80855 . + . ID=gene-C9E95_RS05280;Name=C9E95_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05280;old_locus_tag=C9E95_05415 NZ_PYJW01000057.1 Protein Homology CDS 80286 80855 . + 0 ID=cds-WP_023242136.1;Parent=gene-C9E95_RS05280;Dbxref=GenBank:WP_023242136.1;Name=WP_023242136.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669449.1;locus_tag=C9E95_RS05280;product=DedA family protein;protein_id=WP_023242136.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 80904 81665 . - . ID=gene-C9E95_RS05285;Name=C9E95_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05285;old_locus_tag=C9E95_05420 NZ_PYJW01000057.1 Protein Homology CDS 80904 81665 . - 0 ID=cds-WP_000169608.1;Parent=gene-C9E95_RS05285;Dbxref=GenBank:WP_000169608.1;Name=WP_000169608.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461116.1;locus_tag=C9E95_RS05285;product=SDR family oxidoreductase;protein_id=WP_000169608.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 81731 83167 . - . ID=gene-C9E95_RS05290;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=C9E95_RS05290;old_locus_tag=C9E95_05425 NZ_PYJW01000057.1 Protein Homology CDS 81731 83167 . - 0 ID=cds-WP_001081457.1;Parent=gene-C9E95_RS05290;Dbxref=GenBank:WP_001081457.1;Name=WP_001081457.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461117.1;locus_tag=C9E95_RS05290;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_001081457.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 83485 83568 . + . ID=gene-C9E95_RS05295;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=C9E95_RS05295;old_locus_tag=C9E95_05430 NZ_PYJW01000057.1 Protein Homology CDS 83485 83568 . + 0 ID=cds-WP_000698460.1;Parent=gene-C9E95_RS05295;Dbxref=GenBank:WP_000698460.1;Name=WP_000698460.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=C9E95_RS05295;product=small membrane protein YohP;protein_id=WP_000698460.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 83626 84564 . - . ID=gene-C9E95_RS05300;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=C9E95_RS05300;old_locus_tag=C9E95_05435 NZ_PYJW01000057.1 Protein Homology CDS 83626 84564 . - 0 ID=cds-WP_080203702.1;Parent=gene-C9E95_RS05300;Dbxref=GenBank:WP_080203702.1;Name=WP_080203702.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461119.1;locus_tag=C9E95_RS05300;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_080203702.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 84673 85866 . - . ID=gene-C9E95_RS05305;Name=C9E95_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05305;old_locus_tag=C9E95_05440 NZ_PYJW01000057.1 Protein Homology CDS 84673 85866 . - 0 ID=cds-WP_000150103.1;Parent=gene-C9E95_RS05305;Dbxref=GenBank:WP_000150103.1;Name=WP_000150103.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461120.1;locus_tag=C9E95_RS05305;product=3-hydroxybenzoate 6-monooxygenase;protein_id=WP_000150103.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 85881 86525 . - . ID=gene-C9E95_RS05310;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=C9E95_RS05310;old_locus_tag=C9E95_05445 NZ_PYJW01000057.1 Protein Homology CDS 85881 86525 . - 0 ID=cds-WP_000781183.1;Parent=gene-C9E95_RS05310;Dbxref=GenBank:WP_000781183.1;Name=WP_000781183.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034,GO:0005737;gbkey=CDS;gene=maiA;go_component=cytoplasm|0005737||IEA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=C9E95_RS05310;product=maleylacetoacetate isomerase;protein_id=WP_000781183.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 86534 87235 . - . ID=gene-C9E95_RS05315;Name=C9E95_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05315;old_locus_tag=C9E95_05450 NZ_PYJW01000057.1 Protein Homology CDS 86534 87235 . - 0 ID=cds-WP_000170621.1;Parent=gene-C9E95_RS05315;Dbxref=GenBank:WP_000170621.1;Name=WP_000170621.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461122.1;locus_tag=C9E95_RS05315;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000170621.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 87251 88288 . - . ID=gene-C9E95_RS05320;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=C9E95_RS05320;old_locus_tag=C9E95_05455 NZ_PYJW01000057.1 Protein Homology CDS 87251 88288 . - 0 ID=cds-WP_001289857.1;Parent=gene-C9E95_RS05320;Dbxref=GenBank:WP_001289857.1;Name=WP_001289857.1;Ontology_term=GO:0047922;gbkey=CDS;gene=gtdA;go_function=gentisate 1%2C2-dioxygenase activity|0047922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461123.1;locus_tag=C9E95_RS05320;product=gentisate 1%2C2-dioxygenase;protein_id=WP_001289857.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 88300 89658 . - . ID=gene-C9E95_RS05325;Name=mhbT;gbkey=Gene;gene=mhbT;gene_biotype=protein_coding;locus_tag=C9E95_RS05325;old_locus_tag=C9E95_05460 NZ_PYJW01000057.1 Protein Homology CDS 88300 89658 . - 0 ID=cds-WP_000194214.1;Parent=gene-C9E95_RS05325;Dbxref=GenBank:WP_000194214.1;Name=WP_000194214.1;gbkey=CDS;gene=mhbT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461124.1;locus_tag=C9E95_RS05325;product=3-hydroxybenzoate transporter MhbT;protein_id=WP_000194214.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 89784 90692 . + . ID=gene-C9E95_RS05330;Name=C9E95_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05330;old_locus_tag=C9E95_05465 NZ_PYJW01000057.1 Protein Homology CDS 89784 90692 . + 0 ID=cds-WP_000024658.1;Parent=gene-C9E95_RS05330;Dbxref=GenBank:WP_000024658.1;Name=WP_000024658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461125.1;locus_tag=C9E95_RS05330;product=LysR substrate-binding domain-containing protein;protein_id=WP_000024658.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 90824 91222 . + . ID=gene-C9E95_RS05335;Name=C9E95_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05335;old_locus_tag=C9E95_05470 NZ_PYJW01000057.1 Protein Homology CDS 90824 91222 . + 0 ID=cds-WP_000045719.1;Parent=gene-C9E95_RS05335;Dbxref=GenBank:WP_000045719.1;Name=WP_000045719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461126.1;locus_tag=C9E95_RS05335;product=CidA/LrgA family protein;protein_id=WP_000045719.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 91219 91914 . + . ID=gene-C9E95_RS05340;Name=C9E95_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05340;old_locus_tag=C9E95_05475 NZ_PYJW01000057.1 Protein Homology CDS 91219 91914 . + 0 ID=cds-WP_080203703.1;Parent=gene-C9E95_RS05340;Dbxref=GenBank:WP_080203703.1;Name=WP_080203703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461127.1;locus_tag=C9E95_RS05340;product=CidB/LrgB family autolysis modulator;protein_id=WP_080203703.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 92068 92952 . + . ID=gene-C9E95_RS05345;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=C9E95_RS05345;old_locus_tag=C9E95_05480 NZ_PYJW01000057.1 Protein Homology CDS 92068 92952 . + 0 ID=cds-WP_041112656.1;Parent=gene-C9E95_RS05345;Dbxref=GenBank:WP_041112656.1;Name=WP_041112656.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461128.1;locus_tag=C9E95_RS05345;product=cytidine deaminase;protein_id=WP_041112656.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 93129 93848 . + . ID=gene-C9E95_RS05350;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=C9E95_RS05350;old_locus_tag=C9E95_05485 NZ_PYJW01000057.1 Protein Homology CDS 93129 93848 . + 0 ID=cds-WP_000920081.1;Parent=gene-C9E95_RS05350;Dbxref=GenBank:WP_000920081.1;Name=WP_000920081.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461129.1;locus_tag=C9E95_RS05350;product=outer membrane permeability protein SanA;protein_id=WP_000920081.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 93845 94090 . + . ID=gene-C9E95_RS05355;Name=C9E95_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05355;old_locus_tag=C9E95_05490 NZ_PYJW01000057.1 Protein Homology CDS 93845 94090 . + 0 ID=cds-WP_000605187.1;Parent=gene-C9E95_RS05355;Dbxref=GenBank:WP_000605187.1;Name=WP_000605187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461130.1;locus_tag=C9E95_RS05355;product=DUF2542 family protein;protein_id=WP_000605187.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 94295 95536 . + . ID=gene-C9E95_RS05360;Name=C9E95_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS05360;old_locus_tag=C9E95_05495 NZ_PYJW01000057.1 Protein Homology CDS 94295 95536 . + 0 ID=cds-WP_063809091.1;Parent=gene-C9E95_RS05360;Dbxref=GenBank:WP_063809091.1;Name=WP_063809091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461131.1;locus_tag=C9E95_RS05360;product=NAD(P)-dependent oxidoreductase;protein_id=WP_063809091.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 95530 96765 . + . ID=gene-C9E95_RS05365;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=C9E95_RS05365;old_locus_tag=C9E95_05500 NZ_PYJW01000057.1 Protein Homology CDS 95530 96765 . + 0 ID=cds-WP_000956095.1;Parent=gene-C9E95_RS05365;Dbxref=GenBank:WP_000956095.1;Name=WP_000956095.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=C9E95_RS05365;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_000956095.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 96840 97850 . - . ID=gene-C9E95_RS05370;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=C9E95_RS05370;old_locus_tag=C9E95_05505 NZ_PYJW01000057.1 Protein Homology CDS 96840 97850 . - 0 ID=cds-WP_001275101.1;Parent=gene-C9E95_RS05370;Dbxref=GenBank:WP_001275101.1;Name=WP_001275101.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=C9E95_RS05370;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_001275101.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 97866 99386 . - . ID=gene-C9E95_RS05375;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=C9E95_RS05375;old_locus_tag=C9E95_05510 NZ_PYJW01000057.1 Protein Homology CDS 97866 99386 . - 0 ID=cds-WP_000535913.1;Parent=gene-C9E95_RS05375;Dbxref=GenBank:WP_000535913.1;Name=WP_000535913.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=C9E95_RS05375;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_000535913.1;transl_table=11 NZ_PYJW01000057.1 RefSeq gene 99520 100518 . - . ID=gene-C9E95_RS05380;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=C9E95_RS05380;old_locus_tag=C9E95_05515 NZ_PYJW01000057.1 Protein Homology CDS 99520 100518 . - 0 ID=cds-WP_001036942.1;Parent=gene-C9E95_RS05380;Dbxref=GenBank:WP_001036942.1;Name=WP_001036942.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461135.1;locus_tag=C9E95_RS05380;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_001036942.1;transl_table=11 ##sequence-region NZ_PYJW01000091.1 1 18121 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000091.1 RefSeq region 1 18121 . + . ID=NZ_PYJW01000091.1:1..18121;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000091.1 RefSeq gene 261 644 . + . ID=gene-C9E95_RS09940;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=C9E95_RS09940;old_locus_tag=C9E95_10195 NZ_PYJW01000091.1 Protein Homology CDS 261 644 . + 0 ID=cds-WP_000778873.1;Parent=gene-C9E95_RS09940;Dbxref=GenBank:WP_000778873.1;Name=WP_000778873.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462466.1;locus_tag=C9E95_RS09940;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_000778873.1;transl_table=11 NZ_PYJW01000091.1 RefSeq pseudogene 622 723 . + . ID=gene-C9E95_RS09945;Name=C9E95_RS09945;end_range=723,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS09945;old_locus_tag=C9E95_10200;partial=true;pseudo=true NZ_PYJW01000091.1 Protein Homology CDS 622 723 . + 0 ID=cds-C9E95_RS09945;Parent=gene-C9E95_RS09945;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=723,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462467.1;locus_tag=C9E95_RS09945;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_PYJW01000091.1 RefSeq gene 765 1868 . - . ID=gene-C9E95_RS09950;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=C9E95_RS09950;old_locus_tag=C9E95_10205 NZ_PYJW01000091.1 Protein Homology CDS 765 1868 . - 0 ID=cds-WP_001518632.1;Parent=gene-C9E95_RS09950;Dbxref=GenBank:WP_001518632.1;Name=WP_001518632.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=C9E95_RS09950;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_001518632.1;transl_table=11 NZ_PYJW01000091.1 RefSeq gene 2190 3044 . - . ID=gene-C9E95_RS09955;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=C9E95_RS09955;old_locus_tag=C9E95_10210 NZ_PYJW01000091.1 Protein Homology CDS 2190 3044 . - 0 ID=cds-WP_000159621.1;Parent=gene-C9E95_RS09955;Dbxref=GenBank:WP_000159621.1;Name=WP_000159621.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462469.1;locus_tag=C9E95_RS09955;product=RNA polymerase sigma factor RpoH;protein_id=WP_000159621.1;transl_table=11 NZ_PYJW01000091.1 RefSeq gene 3290 4345 . - . ID=gene-C9E95_RS09960;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=C9E95_RS09960;old_locus_tag=C9E95_10215 NZ_PYJW01000091.1 Protein Homology CDS 3290 4345 . - 0 ID=cds-WP_001081707.1;Parent=gene-C9E95_RS09960;Dbxref=GenBank:WP_001081707.1;Name=WP_001081707.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462470.1;locus_tag=C9E95_RS09960;product=permease-like cell division protein FtsX;protein_id=WP_001081707.1;transl_table=11 NZ_PYJW01000091.1 RefSeq gene 4338 5006 . - . ID=gene-C9E95_RS09965;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=C9E95_RS09965;old_locus_tag=C9E95_10220 NZ_PYJW01000091.1 Protein Homology CDS 4338 5006 . - 0 ID=cds-WP_000617729.1;Parent=gene-C9E95_RS09965;Dbxref=GenBank:WP_000617729.1;Name=WP_000617729.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462471.1;locus_tag=C9E95_RS09965;product=cell division ATP-binding protein FtsE;protein_id=WP_000617729.1;transl_table=11 NZ_PYJW01000091.1 RefSeq gene 5009 6484 . - . ID=gene-C9E95_RS09970;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=C9E95_RS09970;old_locus_tag=C9E95_10225 NZ_PYJW01000091.1 Protein Homology CDS 5009 6484 . - 0 ID=cds-WP_001118690.1;Parent=gene-C9E95_RS09970;Dbxref=GenBank:WP_001118690.1;Name=WP_001118690.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462472.1;locus_tag=C9E95_RS09970;product=signal recognition particle-docking protein FtsY;protein_id=WP_001118690.1;transl_table=11 NZ_PYJW01000091.1 RefSeq gene 6610 7206 . + . ID=gene-C9E95_RS09975;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=C9E95_RS09975;old_locus_tag=C9E95_10230 NZ_PYJW01000091.1 Protein Homology CDS 6610 7206 . + 0 ID=cds-WP_000743276.1;Parent=gene-C9E95_RS09975;Dbxref=GenBank:WP_000743276.1;Name=WP_000743276.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462473.1;locus_tag=C9E95_RS09975;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_000743276.1;transl_table=11 NZ_PYJW01000091.1 RefSeq gene 7196 7465 . + . ID=gene-C9E95_RS09980;Name=C9E95_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09980;old_locus_tag=C9E95_10235 NZ_PYJW01000091.1 Protein Homology CDS 7196 7465 . + 0 ID=cds-WP_023227422.1;Parent=gene-C9E95_RS09980;Dbxref=GenBank:WP_023227422.1;Name=WP_023227422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=C9E95_RS09980;product=DUF1145 family protein;protein_id=WP_023227422.1;transl_table=11 NZ_PYJW01000091.1 RefSeq gene 7487 7858 . - . ID=gene-C9E95_RS09985;Name=C9E95_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09985;old_locus_tag=C9E95_10240 NZ_PYJW01000091.1 Protein Homology CDS 7487 7858 . - 0 ID=cds-WP_000042855.1;Parent=gene-C9E95_RS09985;Dbxref=GenBank:WP_000042855.1;Name=WP_000042855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462475.1;locus_tag=C9E95_RS09985;product=DUF2500 domain-containing protein;protein_id=WP_000042855.1;transl_table=11 NZ_PYJW01000091.1 RefSeq gene 8000 8626 . + . ID=gene-C9E95_RS09990;Name=C9E95_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09990;old_locus_tag=C9E95_10245 NZ_PYJW01000091.1 Protein Homology CDS 8000 8626 . + 0 ID=cds-WP_000964735.1;Parent=gene-C9E95_RS09990;Dbxref=GenBank:WP_000964735.1;Name=WP_000964735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462476.1;locus_tag=C9E95_RS09990;product=lysoplasmalogenase;protein_id=WP_000964735.1;transl_table=11 NZ_PYJW01000091.1 RefSeq gene 8707 10905 . + . ID=gene-C9E95_RS09995;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=C9E95_RS09995;old_locus_tag=C9E95_10250 NZ_PYJW01000091.1 Protein Homology CDS 8707 10905 . + 0 ID=cds-WP_080203893.1;Parent=gene-C9E95_RS09995;Dbxref=GenBank:WP_080203893.1;Name=WP_080203893.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462477.1;locus_tag=C9E95_RS09995;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_080203893.1;transl_table=11 NZ_PYJW01000091.1 RefSeq gene 11105 12748 . + . ID=gene-C9E95_RS10000;Name=tcp;gbkey=Gene;gene=tcp;gene_biotype=protein_coding;locus_tag=C9E95_RS10000;old_locus_tag=C9E95_10255 NZ_PYJW01000091.1 Protein Homology CDS 11105 12748 . + 0 ID=cds-WP_000789682.1;Parent=gene-C9E95_RS10000;Dbxref=GenBank:WP_000789682.1;Name=WP_000789682.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888;gbkey=CDS;gene=tcp;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462478.1;locus_tag=C9E95_RS10000;product=methyl-accepting chemotaxis citrate transducer;protein_id=WP_000789682.1;transl_table=11 NZ_PYJW01000091.1 RefSeq gene 12772 13017 . - . ID=gene-C9E95_RS10005;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=C9E95_RS10005;old_locus_tag=C9E95_10260 NZ_PYJW01000091.1 Protein Homology CDS 12772 13017 . - 0 ID=cds-WP_001541054.1;Parent=gene-C9E95_RS10005;Dbxref=GenBank:WP_001541054.1;Name=WP_001541054.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462479.1;locus_tag=C9E95_RS10005;product=sulfurtransferase TusA;protein_id=WP_001541054.1;transl_table=11 NZ_PYJW01000091.1 RefSeq gene 13187 13852 . + . ID=gene-C9E95_RS10010;Name=C9E95_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10010;old_locus_tag=C9E95_10265 NZ_PYJW01000091.1 Protein Homology CDS 13187 13852 . + 0 ID=cds-WP_001533906.1;Parent=gene-C9E95_RS10010;Dbxref=GenBank:WP_001533906.1;Name=WP_001533906.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462480.1;locus_tag=C9E95_RS10010;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_001533906.1;transl_table=11 NZ_PYJW01000091.1 RefSeq gene 13925 14482 . + . ID=gene-C9E95_RS10015;Name=C9E95_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10015;old_locus_tag=C9E95_10270 NZ_PYJW01000091.1 Protein Homology CDS 13925 14482 . + 0 ID=cds-WP_001245277.1;Parent=gene-C9E95_RS10015;Dbxref=GenBank:WP_001245277.1;Name=WP_001245277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462481.1;locus_tag=C9E95_RS10015;product=DcrB family lipoprotein;protein_id=WP_001245277.1;transl_table=11 NZ_PYJW01000091.1 RefSeq gene 14486 15745 . - . ID=gene-C9E95_RS10020;Name=C9E95_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10020;old_locus_tag=C9E95_10275 NZ_PYJW01000091.1 Protein Homology CDS 14486 15745 . - 0 ID=cds-WP_080203894.1;Parent=gene-C9E95_RS10020;Dbxref=GenBank:WP_080203894.1;Name=WP_080203894.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462482.3;locus_tag=C9E95_RS10020;product=MFS transporter;protein_id=WP_080203894.1;transl_table=11 NZ_PYJW01000091.1 RefSeq gene 15835 16884 . + . ID=gene-C9E95_RS10025;Name=C9E95_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10025;old_locus_tag=C9E95_10280 NZ_PYJW01000091.1 Protein Homology CDS 15835 16884 . + 0 ID=cds-WP_000179588.1;Parent=gene-C9E95_RS10025;Dbxref=GenBank:WP_000179588.1;Name=WP_000179588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462483.1;locus_tag=C9E95_RS10025;product=AI-2E family transporter;protein_id=WP_000179588.1;transl_table=11 NZ_PYJW01000091.1 RefSeq gene 16936 17514 . + . ID=gene-C9E95_RS10030;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=C9E95_RS10030;old_locus_tag=C9E95_10285 NZ_PYJW01000091.1 Protein Homology CDS 16936 17514 . + 0 ID=cds-WP_000285379.1;Parent=gene-C9E95_RS10030;Dbxref=GenBank:WP_000285379.1;Name=WP_000285379.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462484.1;locus_tag=C9E95_RS10030;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_000285379.1;transl_table=11 NZ_PYJW01000091.1 RefSeq gene 17606 18007 . + . ID=gene-C9E95_RS10035;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=C9E95_RS10035;old_locus_tag=C9E95_10290 NZ_PYJW01000091.1 Protein Homology CDS 17606 18007 . + 0 ID=cds-WP_001190057.1;Parent=gene-C9E95_RS10035;Dbxref=GenBank:WP_001190057.1;Name=WP_001190057.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462485.1;locus_tag=C9E95_RS10035;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_001190057.1;transl_table=11 ##sequence-region NZ_PYJW01000048.1 1 18102 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000048.1 RefSeq region 1 18102 . + . ID=NZ_PYJW01000048.1:1..18102;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000048.1 RefSeq gene 227 2167 . + . ID=gene-C9E95_RS03665;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=protein_coding;locus_tag=C9E95_RS03665;old_locus_tag=C9E95_03755 NZ_PYJW01000048.1 Protein Homology CDS 227 2167 . + 0 ID=cds-WP_135369814.1;Parent=gene-C9E95_RS03665;Dbxref=GenBank:WP_135369814.1;Name=WP_135369814.1;Ontology_term=GO:0019310,GO:0016823,GO:0030976;gbkey=CDS;gene=iolD;go_function=hydrolase activity%2C acting on acid carbon-carbon bonds%2C in ketonic substances|0016823||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453702.1;locus_tag=C9E95_RS03665;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);protein_id=WP_135369814.1;transl_table=11 NZ_PYJW01000048.1 RefSeq gene 2348 3370 . + . ID=gene-C9E95_RS03670;Name=iolG2;gbkey=Gene;gene=iolG2;gene_biotype=protein_coding;locus_tag=C9E95_RS03670;old_locus_tag=C9E95_03760 NZ_PYJW01000048.1 Protein Homology CDS 2348 3370 . + 0 ID=cds-WP_000736098.1;Parent=gene-C9E95_RS03670;Dbxref=GenBank:WP_000736098.1;Name=WP_000736098.1;gbkey=CDS;gene=iolG2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463294.1;locus_tag=C9E95_RS03670;product=D-chiro-inositol-2-dehydrogenase IolG2;protein_id=WP_000736098.1;transl_table=11 NZ_PYJW01000048.1 RefSeq gene 3443 4669 . + . ID=gene-C9E95_RS03675;Name=C9E95_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03675;old_locus_tag=C9E95_03765 NZ_PYJW01000048.1 Protein Homology CDS 3443 4669 . + 0 ID=cds-WP_000661780.1;Parent=gene-C9E95_RS03675;Dbxref=GenBank:WP_000661780.1;Name=WP_000661780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463295.1;locus_tag=C9E95_RS03675;product=MFS transporter;protein_id=WP_000661780.1;transl_table=11 NZ_PYJW01000048.1 RefSeq gene 4830 5645 . + . ID=gene-C9E95_RS03680;Name=iolI2;gbkey=Gene;gene=iolI2;gene_biotype=protein_coding;locus_tag=C9E95_RS03680;old_locus_tag=C9E95_03770 NZ_PYJW01000048.1 Protein Homology CDS 4830 5645 . + 0 ID=cds-WP_001019386.1;Parent=gene-C9E95_RS03680;Dbxref=GenBank:WP_001019386.1;Name=WP_001019386.1;gbkey=CDS;gene=iolI2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463296.1;locus_tag=C9E95_RS03680;product=2-keto-myo-inositol isomerase IolI2;protein_id=WP_001019386.1;transl_table=11 NZ_PYJW01000048.1 RefSeq gene 5698 6582 . + . ID=gene-C9E95_RS03685;Name=iolH;gbkey=Gene;gene=iolH;gene_biotype=protein_coding;locus_tag=C9E95_RS03685;old_locus_tag=C9E95_03775 NZ_PYJW01000048.1 Protein Homology CDS 5698 6582 . + 0 ID=cds-WP_000683955.1;Parent=gene-C9E95_RS03685;Dbxref=GenBank:WP_000683955.1;Name=WP_000683955.1;gbkey=CDS;gene=iolH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463297.1;locus_tag=C9E95_RS03685;product=sugar phosphate isomerase/epimerase IolH;protein_id=WP_000683955.1;transl_table=11 NZ_PYJW01000048.1 RefSeq gene 6638 7189 . - . ID=gene-C9E95_RS03690;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=C9E95_RS03690;old_locus_tag=C9E95_03780 NZ_PYJW01000048.1 Protein Homology CDS 6638 7189 . - 0 ID=cds-WP_000166287.1;Parent=gene-C9E95_RS03690;Dbxref=GenBank:WP_000166287.1;Name=WP_000166287.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463298.1;locus_tag=C9E95_RS03690;product=ribosome biogenesis factor YjgA;protein_id=WP_000166287.1;transl_table=11 NZ_PYJW01000048.1 RefSeq gene 7285 8637 . + . ID=gene-C9E95_RS03695;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=C9E95_RS03695;old_locus_tag=C9E95_03785 NZ_PYJW01000048.1 Protein Homology CDS 7285 8637 . + 0 ID=cds-WP_000852989.1;Parent=gene-C9E95_RS03695;Dbxref=GenBank:WP_000852989.1;Name=WP_000852989.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463299.1;locus_tag=C9E95_RS03695;product=metalloprotease PmbA;protein_id=WP_000852989.1;transl_table=11 NZ_PYJW01000048.1 RefSeq gene 8736 9122 . + . ID=gene-C9E95_RS03700;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=C9E95_RS03700;old_locus_tag=C9E95_03790 NZ_PYJW01000048.1 Protein Homology CDS 8736 9122 . + 0 ID=cds-WP_023216473.1;Parent=gene-C9E95_RS03700;Dbxref=GenBank:WP_023216473.1;Name=WP_023216473.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463300.1;locus_tag=C9E95_RS03700;product=cytochrome b562;protein_id=WP_023216473.1;transl_table=11 NZ_PYJW01000048.1 RefSeq gene 9400 9738 . + . ID=gene-C9E95_RS03705;Name=C9E95_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03705;old_locus_tag=C9E95_03795 NZ_PYJW01000048.1 Protein Homology CDS 9400 9738 . + 0 ID=cds-WP_001255103.1;Parent=gene-C9E95_RS03705;Dbxref=GenBank:WP_001255103.1;Name=WP_001255103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463301.1;locus_tag=C9E95_RS03705;product=glycine dehydrogenase;protein_id=WP_001255103.1;transl_table=11 NZ_PYJW01000048.1 RefSeq gene 9749 10111 . + . ID=gene-C9E95_RS03710;Name=C9E95_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03710;old_locus_tag=C9E95_03800 NZ_PYJW01000048.1 Protein Homology CDS 9749 10111 . + 0 ID=cds-WP_000435389.1;Parent=gene-C9E95_RS03710;Dbxref=GenBank:WP_000435389.1;Name=WP_000435389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463302.1;locus_tag=C9E95_RS03710;product=SFCGS family glycine-rich protein;protein_id=WP_000435389.1;transl_table=11 NZ_PYJW01000048.1 RefSeq gene 10111 10413 . + . ID=gene-C9E95_RS03715;Name=C9E95_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03715;old_locus_tag=C9E95_03805 NZ_PYJW01000048.1 Protein Homology CDS 10111 10413 . + 0 ID=cds-WP_000975187.1;Parent=gene-C9E95_RS03715;Dbxref=GenBank:WP_000975187.1;Name=WP_000975187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463303.1;locus_tag=C9E95_RS03715;product=DUF4312 family protein;protein_id=WP_000975187.1;transl_table=11 NZ_PYJW01000048.1 RefSeq gene 10436 11212 . + . ID=gene-C9E95_RS03720;Name=C9E95_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03720;old_locus_tag=C9E95_03810 NZ_PYJW01000048.1 Protein Homology CDS 10436 11212 . + 0 ID=cds-WP_000478578.1;Parent=gene-C9E95_RS03720;Dbxref=GenBank:WP_000478578.1;Name=WP_000478578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463304.1;locus_tag=C9E95_RS03720;product=DUF4311 domain-containing protein;protein_id=WP_000478578.1;transl_table=11 NZ_PYJW01000048.1 RefSeq gene 11224 11868 . + . ID=gene-C9E95_RS03725;Name=C9E95_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03725;old_locus_tag=C9E95_03815 NZ_PYJW01000048.1 Protein Homology CDS 11224 11868 . + 0 ID=cds-WP_000392128.1;Parent=gene-C9E95_RS03725;Dbxref=GenBank:WP_000392128.1;Name=WP_000392128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463305.1;locus_tag=C9E95_RS03725;product=DUF4310 family protein;protein_id=WP_000392128.1;transl_table=11 NZ_PYJW01000048.1 RefSeq gene 11927 13060 . + . ID=gene-C9E95_RS03730;Name=C9E95_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03730;old_locus_tag=C9E95_03820 NZ_PYJW01000048.1 Protein Homology CDS 11927 13060 . + 0 ID=cds-WP_135369815.1;Parent=gene-C9E95_RS03730;Dbxref=GenBank:WP_135369815.1;Name=WP_135369815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463306.1;locus_tag=C9E95_RS03730;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WP_135369815.1;transl_table=11 NZ_PYJW01000048.1 RefSeq gene 13044 14162 . + . ID=gene-C9E95_RS03735;Name=C9E95_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03735;old_locus_tag=C9E95_03825 NZ_PYJW01000048.1 Protein Homology CDS 13044 14162 . + 0 ID=cds-WP_135369816.1;Parent=gene-C9E95_RS03735;Dbxref=GenBank:WP_135369816.1;Name=WP_135369816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463307.1;locus_tag=C9E95_RS03735;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WP_135369816.1;transl_table=11 NZ_PYJW01000048.1 RefSeq gene 14159 14899 . + . ID=gene-C9E95_RS03740;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=C9E95_RS03740;old_locus_tag=C9E95_03830 NZ_PYJW01000048.1 Protein Homology CDS 14159 14899 . + 0 ID=cds-WP_135369817.1;Parent=gene-C9E95_RS03740;Dbxref=GenBank:WP_135369817.1;Name=WP_135369817.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463308.2;locus_tag=C9E95_RS03740;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_135369817.1;transl_table=11 NZ_PYJW01000048.1 RefSeq gene 14916 16829 . + . ID=gene-C9E95_RS03745;Name=C9E95_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03745;old_locus_tag=C9E95_03835 NZ_PYJW01000048.1 Protein Homology CDS 14916 16829 . + 0 ID=cds-WP_024154978.1;Parent=gene-C9E95_RS03745;Dbxref=GenBank:WP_024154978.1;Name=WP_024154978.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463309.1;locus_tag=C9E95_RS03745;product=BglG family transcription antiterminator;protein_id=WP_024154978.1;transl_table=11 NZ_PYJW01000048.1 RefSeq gene 16907 17149 . + . ID=gene-C9E95_RS03750;Name=C9E95_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03750;old_locus_tag=C9E95_03840 NZ_PYJW01000048.1 Protein Homology CDS 16907 17149 . + 0 ID=cds-WP_000212724.1;Parent=gene-C9E95_RS03750;Dbxref=GenBank:WP_000212724.1;Name=WP_000212724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463310.1;locus_tag=C9E95_RS03750;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_000212724.1;transl_table=11 NZ_PYJW01000048.1 RefSeq gene 17139 17423 . + . ID=gene-C9E95_RS03755;Name=C9E95_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03755;old_locus_tag=C9E95_03845 NZ_PYJW01000048.1 Protein Homology CDS 17139 17423 . + 0 ID=cds-WP_023243277.1;Parent=gene-C9E95_RS03755;Dbxref=GenBank:WP_023243277.1;Name=WP_023243277.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463311.1;locus_tag=C9E95_RS03755;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_023243277.1;transl_table=11 NZ_PYJW01000048.1 RefSeq gene 17427 17891 . - . ID=gene-C9E95_RS03760;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=C9E95_RS03760;old_locus_tag=C9E95_03850 NZ_PYJW01000048.1 Protein Homology CDS 17427 17891 . - 0 ID=cds-WP_023993573.1;Parent=gene-C9E95_RS03760;Dbxref=GenBank:WP_023993573.1;Name=WP_023993573.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=C9E95_RS03760;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_023993573.1;transl_table=11 ##sequence-region NZ_PYJW01000092.1 1 17792 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000092.1 RefSeq region 1 17792 . + . ID=NZ_PYJW01000092.1:1..17792;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000092.1 RefSeq gene 97 2235 . - . ID=gene-C9E95_RS10040;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=C9E95_RS10040;old_locus_tag=C9E95_10295 NZ_PYJW01000092.1 Protein Homology CDS 97 2235 . - 0 ID=cds-WP_135369839.1;Parent=gene-C9E95_RS10040;Dbxref=GenBank:WP_135369839.1;Name=WP_135369839.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463313.1;locus_tag=C9E95_RS10040;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_135369839.1;transl_table=11 NZ_PYJW01000092.1 RefSeq gene 2644 4296 . - . ID=gene-C9E95_RS10045;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=C9E95_RS10045;old_locus_tag=C9E95_10300 NZ_PYJW01000092.1 Protein Homology CDS 2644 4296 . - 0 ID=cds-WP_135369840.1;Parent=gene-C9E95_RS10045;Dbxref=GenBank:WP_135369840.1;Name=WP_135369840.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463314.1;locus_tag=C9E95_RS10045;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_135369840.1;transl_table=11 NZ_PYJW01000092.1 RefSeq gene 4346 5764 . - . ID=gene-C9E95_RS10050;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=C9E95_RS10050;old_locus_tag=C9E95_10305 NZ_PYJW01000092.1 Protein Homology CDS 4346 5764 . - 0 ID=cds-WP_080203714.1;Parent=gene-C9E95_RS10050;Dbxref=GenBank:WP_080203714.1;Name=WP_080203714.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224799.1;locus_tag=C9E95_RS10050;product=PTS trehalose transporter subunit IIBC;protein_id=WP_080203714.1;transl_table=11 NZ_PYJW01000092.1 RefSeq gene 5902 6849 . - . ID=gene-C9E95_RS10055;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=C9E95_RS10055;old_locus_tag=C9E95_10310 NZ_PYJW01000092.1 Protein Homology CDS 5902 6849 . - 0 ID=cds-WP_001181297.1;Parent=gene-C9E95_RS10055;Dbxref=GenBank:WP_001181297.1;Name=WP_001181297.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463315.1;locus_tag=C9E95_RS10055;product=trehalose operon repressor TreR;protein_id=WP_001181297.1;transl_table=11 NZ_PYJW01000092.1 RefSeq gene 7039 7092 . + . ID=gene-C9E95_RS23730;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=C9E95_RS23730 NZ_PYJW01000092.1 Protein Homology CDS 7039 7092 . + 0 ID=cds-WP_099374030.1;Parent=gene-C9E95_RS23730;Dbxref=GenBank:WP_099374030.1;Name=WP_099374030.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: protein motif:HMM:NF028369.6;locus_tag=C9E95_RS23730;product=mgtA regulatory leader peptide MgtL;protein_id=WP_099374030.1;transl_table=11 NZ_PYJW01000092.1 RefSeq gene 7233 9941 . + . ID=gene-C9E95_RS10065;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=C9E95_RS10065;old_locus_tag=C9E95_10315 NZ_PYJW01000092.1 Protein Homology CDS 7233 9941 . + 0 ID=cds-WP_000920870.1;Parent=gene-C9E95_RS10065;Dbxref=GenBank:WP_000920870.1;Name=WP_000920870.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=C9E95_RS10065;product=magnesium-translocating P-type ATPase;protein_id=WP_000920870.1;transl_table=11 NZ_PYJW01000092.1 RefSeq gene 10030 10416 . - . ID=gene-C9E95_RS10070;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=C9E95_RS10070;old_locus_tag=C9E95_10320 NZ_PYJW01000092.1 Protein Homology CDS 10030 10416 . - 0 ID=cds-WP_000047544.1;Parent=gene-C9E95_RS10070;Dbxref=GenBank:WP_000047544.1;Name=WP_000047544.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463318.1;locus_tag=C9E95_RS10070;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_000047544.1;transl_table=11 NZ_PYJW01000092.1 RefSeq gene 10493 10954 . - . ID=gene-C9E95_RS10075;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=C9E95_RS10075;old_locus_tag=C9E95_10325 NZ_PYJW01000092.1 Protein Homology CDS 10493 10954 . - 0 ID=cds-WP_000148567.1;Parent=gene-C9E95_RS10075;Dbxref=GenBank:WP_000148567.1;Name=WP_000148567.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=C9E95_RS10075;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_000148567.1;transl_table=11 NZ_PYJW01000092.1 RefSeq gene 10967 11902 . - . ID=gene-C9E95_RS10080;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=C9E95_RS10080;old_locus_tag=C9E95_10330 NZ_PYJW01000092.1 Protein Homology CDS 10967 11902 . - 0 ID=cds-WP_000013055.1;Parent=gene-C9E95_RS10080;Dbxref=GenBank:WP_000013055.1;Name=WP_000013055.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463320.1;locus_tag=C9E95_RS10080;product=aspartate carbamoyltransferase;protein_id=WP_000013055.1;transl_table=11 NZ_PYJW01000092.1 RefSeq gene 11938 12039 . - . ID=gene-C9E95_RS10085;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=C9E95_RS10085;old_locus_tag=C9E95_10335 NZ_PYJW01000092.1 Protein Homology CDS 11938 12039 . - 0 ID=cds-WP_000249504.1;Parent=gene-C9E95_RS10085;Dbxref=GenBank:WP_000249504.1;Name=WP_000249504.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=C9E95_RS10085;product=pyr operon leader peptide;protein_id=WP_000249504.1;transl_table=11 NZ_PYJW01000092.1 RefSeq gene 12019 12159 . + . ID=gene-C9E95_RS10090;Name=C9E95_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10090;old_locus_tag=C9E95_10340 NZ_PYJW01000092.1 Protein Homology CDS 12019 12159 . + 0 ID=cds-WP_001518160.1;Parent=gene-C9E95_RS10090;Dbxref=GenBank:WP_001518160.1;Name=WP_001518160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453732.1;locus_tag=C9E95_RS10090;product=hypothetical protein;protein_id=WP_001518160.1;transl_table=11 NZ_PYJW01000092.1 RefSeq gene 12129 12617 . - . ID=gene-C9E95_RS10095;Name=C9E95_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10095;old_locus_tag=C9E95_10345 NZ_PYJW01000092.1 Protein Homology CDS 12129 12617 . - 0 ID=cds-WP_000666051.1;Parent=gene-C9E95_RS10095;Dbxref=GenBank:WP_000666051.1;Name=WP_000666051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463323.1;locus_tag=C9E95_RS10095;product=arginine repressor;protein_id=WP_000666051.1;transl_table=11 NZ_PYJW01000092.1 RefSeq gene 12804 14207 . - . ID=gene-C9E95_RS10100;Name=C9E95_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10100;old_locus_tag=C9E95_10350 NZ_PYJW01000092.1 Protein Homology CDS 12804 14207 . - 0 ID=cds-WP_080203715.1;Parent=gene-C9E95_RS10100;Dbxref=GenBank:WP_080203715.1;Name=WP_080203715.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463324.1;locus_tag=C9E95_RS10100;product=YfcC family protein;protein_id=WP_080203715.1;transl_table=11 NZ_PYJW01000092.1 RefSeq gene 14263 15267 . - . ID=gene-C9E95_RS10105;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=C9E95_RS10105;old_locus_tag=C9E95_10355 NZ_PYJW01000092.1 Protein Homology CDS 14263 15267 . - 0 ID=cds-WP_000237031.1;Parent=gene-C9E95_RS10105;Dbxref=GenBank:WP_000237031.1;Name=WP_000237031.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463325.1;locus_tag=C9E95_RS10105;product=ornithine carbamoyltransferase;protein_id=WP_000237031.1;transl_table=11 NZ_PYJW01000092.1 RefSeq gene 15379 16311 . - . ID=gene-C9E95_RS10110;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=C9E95_RS10110;old_locus_tag=C9E95_10360 NZ_PYJW01000092.1 Protein Homology CDS 15379 16311 . - 0 ID=cds-WP_000428751.1;Parent=gene-C9E95_RS10110;Dbxref=GenBank:WP_000428751.1;Name=WP_000428751.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463326.1;locus_tag=C9E95_RS10110;product=carbamate kinase;protein_id=WP_000428751.1;transl_table=11 NZ_PYJW01000092.1 RefSeq gene 16322 17542 . - . ID=gene-C9E95_RS10115;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=C9E95_RS10115;old_locus_tag=C9E95_10365 NZ_PYJW01000092.1 Protein Homology CDS 16322 17542 . - 0 ID=cds-WP_000410844.1;Parent=gene-C9E95_RS10115;Dbxref=GenBank:WP_000410844.1;Name=WP_000410844.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463327.1;locus_tag=C9E95_RS10115;product=arginine deiminase;protein_id=WP_000410844.1;transl_table=11 ##sequence-region NZ_PYJW01000046.1 1 17779 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000046.1 RefSeq region 1 17779 . + . ID=NZ_PYJW01000046.1:1..17779;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000046.1 RefSeq pseudogene 1 135 . + . ID=gene-C9E95_RS23145;Name=C9E95_RS23145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23145;partial=true;pseudo=true;start_range=.,1 NZ_PYJW01000046.1 Protein Homology CDS 1 135 . + 0 ID=cds-C9E95_RS23145;Parent=gene-C9E95_RS23145;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400600.1;locus_tag=C9E95_RS23145;partial=true;product=non-LEE encoded effector protein NleB;pseudo=true;start_range=.,1;transl_table=11 NZ_PYJW01000046.1 RefSeq gene 356 1489 . - . ID=gene-C9E95_RS03475;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=C9E95_RS03475;old_locus_tag=C9E95_03555 NZ_PYJW01000046.1 Protein Homology CDS 356 1489 . - 0 ID=cds-WP_080204095.1;Parent=gene-C9E95_RS03475;Dbxref=GenBank:WP_080204095.1;Name=WP_080204095.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463028.1;locus_tag=C9E95_RS03475;product=2-iminoacetate synthase ThiH;protein_id=WP_080204095.1;transl_table=11 NZ_PYJW01000046.1 RefSeq gene 1486 2256 . - . ID=gene-C9E95_RS03480;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=C9E95_RS03480;old_locus_tag=C9E95_03560 NZ_PYJW01000046.1 Protein Homology CDS 1486 2256 . - 0 ID=cds-WP_080204094.1;Parent=gene-C9E95_RS03480;Dbxref=GenBank:WP_080204094.1;Name=WP_080204094.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463029.1;locus_tag=C9E95_RS03480;product=thiazole synthase;protein_id=WP_080204094.1;transl_table=11 NZ_PYJW01000046.1 RefSeq gene 2258 2458 . - . ID=gene-C9E95_RS03485;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=C9E95_RS03485;old_locus_tag=C9E95_03565 NZ_PYJW01000046.1 Protein Homology CDS 2258 2458 . - 0 ID=cds-WP_080204093.1;Parent=gene-C9E95_RS03485;Dbxref=GenBank:WP_080204093.1;Name=WP_080204093.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463030.1;locus_tag=C9E95_RS03485;product=sulfur carrier protein ThiS;protein_id=WP_080204093.1;transl_table=11 NZ_PYJW01000046.1 RefSeq gene 2439 3197 . - . ID=gene-C9E95_RS03490;Name=C9E95_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03490;old_locus_tag=C9E95_03570 NZ_PYJW01000046.1 Protein Homology CDS 2439 3197 . - 0 ID=cds-WP_001627473.1;Parent=gene-C9E95_RS03490;Dbxref=GenBank:WP_001627473.1;Name=WP_001627473.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463031.1;locus_tag=C9E95_RS03490;product=HesA/MoeB/ThiF family protein;protein_id=WP_001627473.1;transl_table=11 NZ_PYJW01000046.1 RefSeq gene 3190 3825 . - . ID=gene-C9E95_RS03495;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=C9E95_RS03495;old_locus_tag=C9E95_03575 NZ_PYJW01000046.1 Protein Homology CDS 3190 3825 . - 0 ID=cds-WP_080204092.1;Parent=gene-C9E95_RS03495;Dbxref=GenBank:WP_080204092.1;Name=WP_080204092.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463032.1;locus_tag=C9E95_RS03495;product=thiamine phosphate synthase;protein_id=WP_080204092.1;transl_table=11 NZ_PYJW01000046.1 RefSeq gene 3825 5720 . - . ID=gene-C9E95_RS03500;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=C9E95_RS03500;old_locus_tag=C9E95_03580 NZ_PYJW01000046.1 Protein Homology CDS 3825 5720 . - 0 ID=cds-WP_080204091.1;Parent=gene-C9E95_RS03500;Dbxref=GenBank:WP_080204091.1;Name=WP_080204091.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463033.1;locus_tag=C9E95_RS03500;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_080204091.1;transl_table=11 NZ_PYJW01000046.1 RefSeq gene 6084 6572 . - . ID=gene-C9E95_RS03505;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=C9E95_RS03505;old_locus_tag=C9E95_03585 NZ_PYJW01000046.1 Protein Homology CDS 6084 6572 . - 0 ID=cds-WP_000934315.1;Parent=gene-C9E95_RS03505;Dbxref=GenBank:WP_000934315.1;Name=WP_000934315.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463034.1;locus_tag=C9E95_RS03505;product=sigma D regulator;protein_id=WP_000934315.1;transl_table=11 NZ_PYJW01000046.1 RefSeq gene 6665 7438 . + . ID=gene-C9E95_RS03510;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=C9E95_RS03510;old_locus_tag=C9E95_03590 NZ_PYJW01000046.1 Protein Homology CDS 6665 7438 . + 0 ID=cds-WP_000373960.1;Parent=gene-C9E95_RS03510;Dbxref=GenBank:WP_000373960.1;Name=WP_000373960.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463035.1;locus_tag=C9E95_RS03510;product=NAD(+) diphosphatase;protein_id=WP_000373960.1;transl_table=11 NZ_PYJW01000046.1 RefSeq gene 7479 8543 . + . ID=gene-C9E95_RS03515;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=C9E95_RS03515;old_locus_tag=C9E95_03595 NZ_PYJW01000046.1 Protein Homology CDS 7479 8543 . + 0 ID=cds-WP_000137620.1;Parent=gene-C9E95_RS03515;Dbxref=GenBank:WP_000137620.1;Name=WP_000137620.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463036.2;locus_tag=C9E95_RS03515;product=uroporphyrinogen decarboxylase;protein_id=WP_000137620.1;transl_table=11 NZ_PYJW01000046.1 RefSeq gene 8553 9224 . + . ID=gene-C9E95_RS03520;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=C9E95_RS03520;old_locus_tag=C9E95_03600 NZ_PYJW01000046.1 Protein Homology CDS 8553 9224 . + 0 ID=cds-WP_000362359.1;Parent=gene-C9E95_RS03520;Dbxref=GenBank:WP_000362359.1;Name=WP_000362359.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463037.1;locus_tag=C9E95_RS03520;product=deoxyribonuclease V;protein_id=WP_000362359.1;transl_table=11 NZ_PYJW01000046.1 RefSeq gene 9266 9856 . + . ID=gene-C9E95_RS03525;Name=C9E95_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03525;old_locus_tag=C9E95_03605 NZ_PYJW01000046.1 Protein Homology CDS 9266 9856 . + 0 ID=cds-WP_000940092.1;Parent=gene-C9E95_RS03525;Dbxref=GenBank:WP_000940092.1;Name=WP_000940092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463038.1;locus_tag=C9E95_RS03525;product=YjaG family protein;protein_id=WP_000940092.1;transl_table=11 NZ_PYJW01000046.1 RefSeq gene 10043 10315 . + . ID=gene-C9E95_RS03530;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=C9E95_RS03530;old_locus_tag=C9E95_03610 NZ_PYJW01000046.1 Protein Homology CDS 10043 10315 . + 0 ID=cds-WP_001044509.1;Parent=gene-C9E95_RS03530;Dbxref=GenBank:WP_001044509.1;Name=WP_001044509.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=C9E95_RS03530;product=nucleoid-associated protein HU-alpha;protein_id=WP_001044509.1;transl_table=11 NZ_PYJW01000046.1 RefSeq gene 10327 11019 . + . ID=gene-C9E95_RS03535;Name=C9E95_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03535;old_locus_tag=C9E95_03615 NZ_PYJW01000046.1 Protein Homology CDS 10327 11019 . + 0 ID=cds-WP_001083931.1;Parent=gene-C9E95_RS03535;Dbxref=GenBank:WP_001083931.1;Name=WP_001083931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463040.1;locus_tag=C9E95_RS03535;product=DUF1481 domain-containing protein;protein_id=WP_001083931.1;transl_table=11 NZ_PYJW01000046.1 RefSeq gene 11061 11516 . - . ID=gene-C9E95_RS03540;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=C9E95_RS03540;old_locus_tag=C9E95_03620 NZ_PYJW01000046.1 Protein Homology CDS 11061 11516 . - 0 ID=cds-WP_080204090.1;Parent=gene-C9E95_RS03540;Dbxref=GenBank:WP_080204090.1;Name=WP_080204090.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463041.1;locus_tag=C9E95_RS03540;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_080204090.1;transl_table=11 NZ_PYJW01000046.1 RefSeq gene 11770 13182 . + . ID=gene-C9E95_RS03545;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=C9E95_RS03545;old_locus_tag=C9E95_03625 NZ_PYJW01000046.1 Protein Homology CDS 11770 13182 . + 0 ID=cds-WP_080204096.1;Parent=gene-C9E95_RS03545;Dbxref=GenBank:WP_080204096.1;Name=WP_080204096.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463042.1;locus_tag=C9E95_RS03545;product=two-component system sensor histidine kinase ZraS;protein_id=WP_080204096.1;transl_table=11 NZ_PYJW01000046.1 RefSeq gene 13188 14513 . + . ID=gene-C9E95_RS03550;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=C9E95_RS03550;old_locus_tag=C9E95_03630 NZ_PYJW01000046.1 Protein Homology CDS 13188 14513 . + 0 ID=cds-WP_000617928.1;Parent=gene-C9E95_RS03550;Dbxref=GenBank:WP_000617928.1;Name=WP_000617928.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463043.1;locus_tag=C9E95_RS03550;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_000617928.1;transl_table=11 NZ_PYJW01000046.1 RefSeq gene 14510 15799 . - . ID=gene-C9E95_RS03555;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=C9E95_RS03555;old_locus_tag=C9E95_03635 NZ_PYJW01000046.1 Protein Homology CDS 14510 15799 . - 0 ID=cds-WP_023993915.1;Parent=gene-C9E95_RS03555;Dbxref=GenBank:WP_023993915.1;Name=WP_023993915.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463044.1;locus_tag=C9E95_RS03555;product=phosphoribosylamine--glycine ligase;protein_id=WP_023993915.1;transl_table=11 NZ_PYJW01000046.1 RefSeq gene 15815 17404 . - . ID=gene-C9E95_RS03560;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=C9E95_RS03560;old_locus_tag=C9E95_03640 NZ_PYJW01000046.1 Protein Homology CDS 15815 17404 . - 0 ID=cds-WP_001187490.1;Parent=gene-C9E95_RS03560;Dbxref=GenBank:WP_001187490.1;Name=WP_001187490.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=C9E95_RS03560;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_001187490.1;transl_table=11 ##sequence-region NZ_PYJW01000142.1 1 17597 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000142.1 RefSeq region 1 17597 . + . ID=NZ_PYJW01000142.1:1..17597;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000142.1 RefSeq gene 176 907 . - . ID=gene-C9E95_RS16360;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=C9E95_RS16360;old_locus_tag=C9E95_16760 NZ_PYJW01000142.1 Protein Homology CDS 176 907 . - 0 ID=cds-WP_080203662.1;Parent=gene-C9E95_RS16360;Dbxref=GenBank:WP_080203662.1;Name=WP_080203662.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463230.1;locus_tag=C9E95_RS16360;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_080203662.1;transl_table=11 NZ_PYJW01000142.1 RefSeq gene 998 3436 . - . ID=gene-C9E95_RS16365;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=C9E95_RS16365;old_locus_tag=C9E95_16765 NZ_PYJW01000142.1 Protein Homology CDS 998 3436 . - 0 ID=cds-WP_080203661.1;Parent=gene-C9E95_RS16365;Dbxref=GenBank:WP_080203661.1;Name=WP_080203661.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463229.1;locus_tag=C9E95_RS16365;product=ribonuclease R;protein_id=WP_080203661.1;transl_table=11 NZ_PYJW01000142.1 RefSeq gene 3474 3899 . - . ID=gene-C9E95_RS16370;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=C9E95_RS16370;old_locus_tag=C9E95_16770 NZ_PYJW01000142.1 Protein Homology CDS 3474 3899 . - 0 ID=cds-WP_001177632.1;Parent=gene-C9E95_RS16370;Dbxref=GenBank:WP_001177632.1;Name=WP_001177632.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=C9E95_RS16370;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_001177632.1;transl_table=11 NZ_PYJW01000142.1 RefSeq gene 4107 5405 . - . ID=gene-C9E95_RS16375;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=C9E95_RS16375;old_locus_tag=C9E95_16775 NZ_PYJW01000142.1 Protein Homology CDS 4107 5405 . - 0 ID=cds-WP_000527960.1;Parent=gene-C9E95_RS16375;Dbxref=GenBank:WP_000527960.1;Name=WP_000527960.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=C9E95_RS16375;product=adenylosuccinate synthase;protein_id=WP_000527960.1;transl_table=11 NZ_PYJW01000142.1 RefSeq gene 5508 5705 . - . ID=gene-C9E95_RS16380;Name=C9E95_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS16380;old_locus_tag=C9E95_16780 NZ_PYJW01000142.1 Protein Homology CDS 5508 5705 . - 0 ID=cds-WP_001089290.1;Parent=gene-C9E95_RS16380;Dbxref=GenBank:WP_001089290.1;Name=WP_001089290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463226.1;locus_tag=C9E95_RS16380;product=DUF2065 domain-containing protein;protein_id=WP_001089290.1;transl_table=11 NZ_PYJW01000142.1 RefSeq gene 5784 6788 . - . ID=gene-C9E95_RS16385;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=C9E95_RS16385;old_locus_tag=C9E95_16785 NZ_PYJW01000142.1 Protein Homology CDS 5784 6788 . - 0 ID=cds-WP_001232417.1;Parent=gene-C9E95_RS16385;Dbxref=GenBank:WP_001232417.1;Name=WP_001232417.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463225.1;locus_tag=C9E95_RS16385;product=protease modulator HflC;protein_id=WP_001232417.1;transl_table=11 NZ_PYJW01000142.1 RefSeq gene 6791 8050 . - . ID=gene-C9E95_RS16390;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=C9E95_RS16390;old_locus_tag=C9E95_16790 NZ_PYJW01000142.1 Protein Homology CDS 6791 8050 . - 0 ID=cds-WP_000312505.1;Parent=gene-C9E95_RS16390;Dbxref=GenBank:WP_000312505.1;Name=WP_000312505.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463224.1;locus_tag=C9E95_RS16390;product=FtsH protease activity modulator HflK;protein_id=WP_000312505.1;transl_table=11 NZ_PYJW01000142.1 RefSeq gene 8265 9545 . - . ID=gene-C9E95_RS16395;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=C9E95_RS16395;old_locus_tag=C9E95_16795 NZ_PYJW01000142.1 Protein Homology CDS 8265 9545 . - 0 ID=cds-WP_000460338.1;Parent=gene-C9E95_RS16395;Dbxref=GenBank:WP_000460338.1;Name=WP_000460338.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463223.1;locus_tag=C9E95_RS16395;product=ribosome rescue GTPase HflX;protein_id=WP_000460338.1;transl_table=11 NZ_PYJW01000142.1 RefSeq gene 9617 9925 . - . ID=gene-C9E95_RS16400;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=C9E95_RS16400;old_locus_tag=C9E95_16800 NZ_PYJW01000142.1 Protein Homology CDS 9617 9925 . - 0 ID=cds-WP_001051875.1;Parent=gene-C9E95_RS16400;Dbxref=GenBank:WP_001051875.1;Name=WP_001051875.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463222.1;locus_tag=C9E95_RS16400;product=RNA chaperone Hfq;protein_id=WP_001051875.1;transl_table=11 NZ_PYJW01000142.1 RefSeq gene 10008 10958 . - . ID=gene-C9E95_RS16405;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=C9E95_RS16405;old_locus_tag=C9E95_16805 NZ_PYJW01000142.1 Protein Homology CDS 10008 10958 . - 0 ID=cds-WP_001000734.1;Parent=gene-C9E95_RS16405;Dbxref=GenBank:WP_001000734.1;Name=WP_001000734.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463221.1;locus_tag=C9E95_RS16405;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001000734.1;transl_table=11 NZ_PYJW01000142.1 RefSeq gene 10951 12807 . - . ID=gene-C9E95_RS16410;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=C9E95_RS16410;old_locus_tag=C9E95_16810 NZ_PYJW01000142.1 Protein Homology CDS 10951 12807 . - 0 ID=cds-WP_080203660.1;Parent=gene-C9E95_RS16410;Dbxref=GenBank:WP_080203660.1;Name=WP_080203660.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463220.1;locus_tag=C9E95_RS16410;product=DNA mismatch repair endonuclease MutL;protein_id=WP_080203660.1;transl_table=11 NZ_PYJW01000142.1 RefSeq gene 12817 14139 . - . ID=gene-C9E95_RS16415;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=C9E95_RS16415;old_locus_tag=C9E95_16815 NZ_PYJW01000142.1 Protein Homology CDS 12817 14139 . - 0 ID=cds-WP_000640355.1;Parent=gene-C9E95_RS16415;Dbxref=GenBank:WP_000640355.1;Name=WP_000640355.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463219.1;locus_tag=C9E95_RS16415;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_000640355.1;transl_table=11 NZ_PYJW01000142.1 RefSeq gene 14156 14617 . - . ID=gene-C9E95_RS16420;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=C9E95_RS16420;old_locus_tag=C9E95_16820 NZ_PYJW01000142.1 Protein Homology CDS 14156 14617 . - 0 ID=cds-WP_000981990.1;Parent=gene-C9E95_RS16420;Dbxref=GenBank:WP_000981990.1;Name=WP_000981990.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463218.1;locus_tag=C9E95_RS16420;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_000981990.1;transl_table=11 NZ_PYJW01000142.1 RefSeq gene 14589 16136 . - . ID=gene-C9E95_RS16425;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=C9E95_RS16425;old_locus_tag=C9E95_16825 NZ_PYJW01000142.1 Protein Homology CDS 14589 16136 . - 0 ID=cds-WP_080203659.1;Parent=gene-C9E95_RS16425;Dbxref=GenBank:WP_080203659.1;Name=WP_080203659.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463217.1;locus_tag=C9E95_RS16425;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_080203659.1;transl_table=11 NZ_PYJW01000142.1 RefSeq gene 16135 17274 . + . ID=gene-C9E95_RS16430;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=C9E95_RS16430;old_locus_tag=C9E95_16830 NZ_PYJW01000142.1 Protein Homology CDS 16135 17274 . + 0 ID=cds-WP_001615111.1;Parent=gene-C9E95_RS16430;Dbxref=GenBank:WP_001615111.1;Name=WP_001615111.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=C9E95_RS16430;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001615111.1;transl_table=11 ##sequence-region NZ_PYJW01000022.1 1 454 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000022.1 RefSeq region 1 454 . + . ID=NZ_PYJW01000022.1:1..454;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000022.1 RefSeq gene 116 191 . - . ID=gene-C9E95_RS01175;Name=C9E95_RS01175;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS01175;old_locus_tag=C9E95_01190 NZ_PYJW01000022.1 tRNAscan-SE tRNA 116 191 . - . ID=rna-C9E95_RS01175;Parent=gene-C9E95_RS01175;anticodon=(pos:complement(156..158));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS01175;product=tRNA-Ala NZ_PYJW01000022.1 tRNAscan-SE exon 116 191 . - . ID=exon-C9E95_RS01175-1;Parent=rna-C9E95_RS01175;anticodon=(pos:complement(156..158));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS01175;product=tRNA-Ala NZ_PYJW01000022.1 RefSeq gene 303 379 . - . ID=gene-C9E95_RS01180;Name=C9E95_RS01180;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS01180;old_locus_tag=C9E95_01195 NZ_PYJW01000022.1 tRNAscan-SE tRNA 303 379 . - . ID=rna-C9E95_RS01180;Parent=gene-C9E95_RS01180;anticodon=(pos:complement(343..345));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS01180;product=tRNA-Ile NZ_PYJW01000022.1 tRNAscan-SE exon 303 379 . - . ID=exon-C9E95_RS01180-1;Parent=rna-C9E95_RS01180;anticodon=(pos:complement(343..345));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS01180;product=tRNA-Ile ##sequence-region NZ_PYJW01000094.1 1 17460 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000094.1 RefSeq region 1 17460 . + . ID=NZ_PYJW01000094.1:1..17460;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000094.1 RefSeq gene 67 486 . + . ID=gene-C9E95_RS10135;Name=C9E95_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10135;old_locus_tag=C9E95_10385 NZ_PYJW01000094.1 Protein Homology CDS 67 486 . + 0 ID=cds-WP_023218414.1;Parent=gene-C9E95_RS10135;Dbxref=GenBank:WP_023218414.1;Name=WP_023218414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459105.1;locus_tag=C9E95_RS10135;product=DUF4751 family protein;protein_id=WP_023218414.1;transl_table=11 NZ_PYJW01000094.1 RefSeq gene 492 1187 . - . ID=gene-C9E95_RS10140;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=C9E95_RS10140;old_locus_tag=C9E95_10390 NZ_PYJW01000094.1 Protein Homology CDS 492 1187 . - 0 ID=cds-WP_058108067.1;Parent=gene-C9E95_RS10140;Dbxref=GenBank:WP_058108067.1;Name=WP_058108067.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459106.1;locus_tag=C9E95_RS10140;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_058108067.1;transl_table=11 NZ_PYJW01000094.1 RefSeq gene 1328 2830 . - . ID=gene-C9E95_RS10145;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=C9E95_RS10145;old_locus_tag=C9E95_10395 NZ_PYJW01000094.1 Protein Homology CDS 1328 2830 . - 0 ID=cds-WP_000151692.1;Parent=gene-C9E95_RS10145;Dbxref=GenBank:WP_000151692.1;Name=WP_000151692.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459107.1;locus_tag=C9E95_RS10145;product=L-arabinose isomerase;protein_id=WP_000151692.1;transl_table=11 NZ_PYJW01000094.1 RefSeq gene 2841 4550 . - . ID=gene-C9E95_RS10150;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=C9E95_RS10150;old_locus_tag=C9E95_10400 NZ_PYJW01000094.1 Protein Homology CDS 2841 4550 . - 0 ID=cds-WP_058107277.1;Parent=gene-C9E95_RS10150;Dbxref=GenBank:WP_058107277.1;Name=WP_058107277.1;Ontology_term=GO:0019568,GO:0005524,GO:0008741;gbkey=CDS;gene=araB;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459108.1;locus_tag=C9E95_RS10150;product=ribulokinase;protein_id=WP_058107277.1;transl_table=11 NZ_PYJW01000094.1 RefSeq gene 4891 5736 . + . ID=gene-C9E95_RS10155;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=C9E95_RS10155;old_locus_tag=C9E95_10405 NZ_PYJW01000094.1 Protein Homology CDS 4891 5736 . + 0 ID=cds-WP_000852387.1;Parent=gene-C9E95_RS10155;Dbxref=GenBank:WP_000852387.1;Name=WP_000852387.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459109.1;locus_tag=C9E95_RS10155;product=arabinose operon transcriptional regulator AraC;protein_id=WP_000852387.1;transl_table=11 NZ_PYJW01000094.1 RefSeq gene 5855 6622 . + . ID=gene-C9E95_RS10160;Name=C9E95_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS10160;old_locus_tag=C9E95_10410 NZ_PYJW01000094.1 Protein Homology CDS 5855 6622 . + 0 ID=cds-WP_001615453.1;Parent=gene-C9E95_RS10160;Dbxref=GenBank:WP_001615453.1;Name=WP_001615453.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459110.1;locus_tag=C9E95_RS10160;product=DedA family protein;protein_id=WP_001615453.1;transl_table=11 NZ_PYJW01000094.1 RefSeq gene 6661 7368 . - . ID=gene-C9E95_RS10165;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=C9E95_RS10165;old_locus_tag=C9E95_10415 NZ_PYJW01000094.1 Protein Homology CDS 6661 7368 . - 0 ID=cds-WP_000915976.1;Parent=gene-C9E95_RS10165;Dbxref=GenBank:WP_000915976.1;Name=WP_000915976.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459111.1;locus_tag=C9E95_RS10165;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_000915976.1;transl_table=11 NZ_PYJW01000094.1 RefSeq gene 7352 8962 . - . ID=gene-C9E95_RS10170;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=C9E95_RS10170;old_locus_tag=C9E95_10420 NZ_PYJW01000094.1 Protein Homology CDS 7352 8962 . - 0 ID=cds-WP_000235632.1;Parent=gene-C9E95_RS10170;Dbxref=GenBank:WP_000235632.1;Name=WP_000235632.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459112.1;locus_tag=C9E95_RS10170;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_000235632.1;transl_table=11 NZ_PYJW01000094.1 RefSeq gene 8938 9921 . - . ID=gene-C9E95_RS10175;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=C9E95_RS10175;old_locus_tag=C9E95_10425 NZ_PYJW01000094.1 Protein Homology CDS 8938 9921 . - 0 ID=cds-WP_076110984.1;Parent=gene-C9E95_RS10175;Dbxref=GenBank:WP_076110984.1;Name=WP_076110984.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459113.1;locus_tag=C9E95_RS10175;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_076110984.1;transl_table=11 NZ_PYJW01000094.1 cmsearch riboswitch 9953 10052 . - . ID=id-NZ_PYJW01000094.1:9953..10052;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_PYJW01000094.1 RefSeq gene 10099 11757 . - . ID=gene-C9E95_RS10180;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=C9E95_RS10180;old_locus_tag=C9E95_10430 NZ_PYJW01000094.1 Protein Homology CDS 10099 11757 . - 0 ID=cds-WP_080068155.1;Parent=gene-C9E95_RS10180;Dbxref=GenBank:WP_080068155.1;Name=WP_080068155.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459114.1;locus_tag=C9E95_RS10180;product=HTH-type transcriptional regulator SgrR;protein_id=WP_080068155.1;transl_table=11 NZ_PYJW01000094.1 RefSeq gene 11850 11972 . + . ID=gene-C9E95_RS10185;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=C9E95_RS10185;old_locus_tag=C9E95_10435 NZ_PYJW01000094.1 Protein Homology CDS 11850 11972 . + 0 ID=cds-WP_001248755.1;Parent=gene-C9E95_RS10185;Dbxref=GenBank:WP_001248755.1;Name=WP_001248755.1;Ontology_term=GO:0046325;gbkey=CDS;gene=sgrT;go_process=negative regulation of D-glucose import|0046325||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248755.1;locus_tag=C9E95_RS10185;product=glucose uptake inhibitor SgrT;protein_id=WP_001248755.1;transl_table=11 NZ_PYJW01000094.1 RefSeq gene 12308 12913 . - . ID=gene-C9E95_RS10190;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=C9E95_RS10190;old_locus_tag=C9E95_10440 NZ_PYJW01000094.1 Protein Homology CDS 12308 12913 . - 0 ID=cds-WP_080203760.1;Parent=gene-C9E95_RS10190;Dbxref=GenBank:WP_080203760.1;Name=WP_080203760.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459115.1;locus_tag=C9E95_RS10190;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_080203760.1;transl_table=11 NZ_PYJW01000094.1 RefSeq gene 12924 14324 . - . ID=gene-C9E95_RS10195;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=C9E95_RS10195;old_locus_tag=C9E95_10445 NZ_PYJW01000094.1 Protein Homology CDS 12924 14324 . - 0 ID=cds-WP_080203759.1;Parent=gene-C9E95_RS10195;Dbxref=GenBank:WP_080203759.1;Name=WP_080203759.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459116.1;locus_tag=C9E95_RS10195;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_080203759.1;transl_table=11 NZ_PYJW01000094.1 RefSeq gene 14327 15418 . - . ID=gene-C9E95_RS10200;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=C9E95_RS10200;old_locus_tag=C9E95_10450 NZ_PYJW01000094.1 Protein Homology CDS 14327 15418 . - 0 ID=cds-WP_001523171.1;Parent=gene-C9E95_RS10200;Dbxref=GenBank:WP_001523171.1;Name=WP_001523171.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=C9E95_RS10200;product=3-isopropylmalate dehydrogenase;protein_id=WP_001523171.1;transl_table=11 NZ_PYJW01000094.1 RefSeq gene 15418 16989 . - . ID=gene-C9E95_RS10205;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=C9E95_RS10205;old_locus_tag=C9E95_10455 NZ_PYJW01000094.1 Protein Homology CDS 15418 16989 . - 0 ID=cds-WP_000082819.1;Parent=gene-C9E95_RS10205;Dbxref=GenBank:WP_000082819.1;Name=WP_000082819.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=C9E95_RS10205;product=2-isopropylmalate synthase;protein_id=WP_000082819.1;transl_table=11 NZ_PYJW01000094.1 RefSeq gene 17077 17163 . - . ID=gene-C9E95_RS10210;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=C9E95_RS10210;old_locus_tag=C9E95_10460 NZ_PYJW01000094.1 Protein Homology CDS 17077 17163 . - 0 ID=cds-WP_001575587.1;Parent=gene-C9E95_RS10210;Dbxref=GenBank:WP_001575587.1;Name=WP_001575587.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459119.1;locus_tag=C9E95_RS10210;product=leu operon leader peptide;protein_id=WP_001575587.1;transl_table=11 ##sequence-region NZ_PYJW01000104.1 1 17024 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000104.1 RefSeq region 1 17024 . + . ID=NZ_PYJW01000104.1:1..17024;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000104.1 RefSeq gene 170 274 . + . ID=gene-C9E95_RS11125;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=C9E95_RS11125 NZ_PYJW01000104.1 Protein Homology CDS 170 274 . + 0 ID=cds-WP_015632840.1;Parent=gene-C9E95_RS11125;Dbxref=GenBank:WP_015632840.1;Name=WP_015632840.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=C9E95_RS11125;product=leader peptide SpeFL;protein_id=WP_015632840.1;transl_table=11 NZ_PYJW01000104.1 RefSeq gene 654 2852 . + . ID=gene-C9E95_RS11130;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=C9E95_RS11130;old_locus_tag=C9E95_11410 NZ_PYJW01000104.1 Protein Homology CDS 654 2852 . + 0 ID=cds-WP_001292402.1;Parent=gene-C9E95_RS11130;Dbxref=GenBank:WP_001292402.1;Name=WP_001292402.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=C9E95_RS11130;product=ornithine decarboxylase SpeF;protein_id=WP_001292402.1;transl_table=11 NZ_PYJW01000104.1 RefSeq gene 2849 4168 . + . ID=gene-C9E95_RS11135;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=C9E95_RS11135;old_locus_tag=C9E95_11415 NZ_PYJW01000104.1 Protein Homology CDS 2849 4168 . + 0 ID=cds-WP_000042658.1;Parent=gene-C9E95_RS11135;Dbxref=GenBank:WP_000042658.1;Name=WP_000042658.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459685.1;locus_tag=C9E95_RS11135;product=putrescine-ornithine antiporter;protein_id=WP_000042658.1;transl_table=11 NZ_PYJW01000104.1 RefSeq gene 4233 4718 . + . ID=gene-C9E95_RS11140;Name=C9E95_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS11140;old_locus_tag=C9E95_11420 NZ_PYJW01000104.1 Protein Homology CDS 4233 4718 . + 0 ID=cds-WP_080203768.1;Parent=gene-C9E95_RS11140;Dbxref=GenBank:WP_080203768.1;Name=WP_080203768.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459684.1;locus_tag=C9E95_RS11140;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_080203768.1;transl_table=11 NZ_PYJW01000104.1 RefSeq gene 4833 6473 . - . ID=gene-C9E95_RS11145;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=C9E95_RS11145;old_locus_tag=C9E95_11425 NZ_PYJW01000104.1 Protein Homology CDS 4833 6473 . - 0 ID=cds-WP_000974372.1;Parent=gene-C9E95_RS11145;Dbxref=GenBank:WP_000974372.1;Name=WP_000974372.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459683.1;locus_tag=C9E95_RS11145;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_000974372.1;transl_table=11 NZ_PYJW01000104.1 RefSeq gene 6498 7040 . - . ID=gene-C9E95_RS11150;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=C9E95_RS11150;old_locus_tag=C9E95_11430 NZ_PYJW01000104.1 Protein Homology CDS 6498 7040 . - 0 ID=cds-WP_000848395.1;Parent=gene-C9E95_RS11150;Dbxref=GenBank:WP_000848395.1;Name=WP_000848395.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459682.1;locus_tag=C9E95_RS11150;product=replication initiation negative regulator SeqA;protein_id=WP_000848395.1;transl_table=11 NZ_PYJW01000104.1 RefSeq gene 7225 7995 . + . ID=gene-C9E95_RS11155;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=C9E95_RS11155;old_locus_tag=C9E95_11435 NZ_PYJW01000104.1 Protein Homology CDS 7225 7995 . + 0 ID=cds-WP_071055332.1;Parent=gene-C9E95_RS11155;Dbxref=GenBank:WP_071055332.1;Name=WP_071055332.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459681.1;locus_tag=C9E95_RS11155;product=esterase;protein_id=WP_071055332.1;transl_table=11 NZ_PYJW01000104.1 RefSeq gene 8129 8422 . + . ID=gene-C9E95_RS11160;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=C9E95_RS11160;old_locus_tag=C9E95_11440 NZ_PYJW01000104.1 Protein Homology CDS 8129 8422 . + 0 ID=cds-WP_001040939.1;Parent=gene-C9E95_RS11160;Dbxref=GenBank:WP_001040939.1;Name=WP_001040939.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459680.1;locus_tag=C9E95_RS11160;product=LexA regulated protein;protein_id=WP_001040939.1;transl_table=11 NZ_PYJW01000104.1 RefSeq gene 8573 9103 . + . ID=gene-C9E95_RS11165;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=C9E95_RS11165;old_locus_tag=C9E95_11445 NZ_PYJW01000104.1 Protein Homology CDS 8573 9103 . + 0 ID=cds-WP_001018621.1;Parent=gene-C9E95_RS11165;Dbxref=GenBank:WP_001018621.1;Name=WP_001018621.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459679.1;locus_tag=C9E95_RS11165;product=flavodoxin FldA;protein_id=WP_001018621.1;transl_table=11 NZ_PYJW01000104.1 RefSeq pseudogene 9307 9392 . + . ID=gene-C9E95_RS23285;Name=C9E95_RS23285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23285;pseudo=true NZ_PYJW01000104.1 Protein Homology CDS 9307 9392 . + 0 ID=cds-C9E95_RS23285;Parent=gene-C9E95_RS23285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=C9E95_RS23285;product=fur leader peptide;pseudo=true;transl_table=11 NZ_PYJW01000104.1 RefSeq gene 9385 9837 . + . ID=gene-C9E95_RS11170;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=C9E95_RS11170;old_locus_tag=C9E95_11450 NZ_PYJW01000104.1 Protein Homology CDS 9385 9837 . + 0 ID=cds-WP_000131699.1;Parent=gene-C9E95_RS11170;Dbxref=GenBank:WP_000131699.1;Name=WP_000131699.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459678.1;locus_tag=C9E95_RS11170;product=ferric iron uptake transcriptional regulator;protein_id=WP_000131699.1;transl_table=11 NZ_PYJW01000104.1 RefSeq gene 9952 10878 . + . ID=gene-C9E95_RS11175;Name=tcuR;gbkey=Gene;gene=tcuR;gene_biotype=protein_coding;locus_tag=C9E95_RS11175;old_locus_tag=C9E95_11455 NZ_PYJW01000104.1 Protein Homology CDS 9952 10878 . + 0 ID=cds-WP_000423371.1;Parent=gene-C9E95_RS11175;Dbxref=GenBank:WP_000423371.1;Name=WP_000423371.1;gbkey=CDS;gene=tcuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459677.1;locus_tag=C9E95_RS11175;product=tricarballylate utilization LysR family transcriptional regulator TcuR;protein_id=WP_000423371.1;transl_table=11 NZ_PYJW01000104.1 RefSeq gene 10976 12379 . + . ID=gene-C9E95_RS11180;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=C9E95_RS11180;old_locus_tag=C9E95_11460 NZ_PYJW01000104.1 Protein Homology CDS 10976 12379 . + 0 ID=cds-WP_079802363.1;Parent=gene-C9E95_RS11180;Dbxref=GenBank:WP_079802363.1;Name=WP_079802363.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459676.1;locus_tag=C9E95_RS11180;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=WP_079802363.1;transl_table=11 NZ_PYJW01000104.1 RefSeq gene 12366 13505 . + . ID=gene-C9E95_RS11185;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=C9E95_RS11185;old_locus_tag=C9E95_11465 NZ_PYJW01000104.1 Protein Homology CDS 12366 13505 . + 0 ID=cds-WP_080203769.1;Parent=gene-C9E95_RS11185;Dbxref=GenBank:WP_080203769.1;Name=WP_080203769.1;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459675.1;locus_tag=C9E95_RS11185;product=tricarballylate utilization protein TcuB;protein_id=WP_080203769.1;transl_table=11 NZ_PYJW01000104.1 RefSeq gene 13556 14860 . + . ID=gene-C9E95_RS11190;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=C9E95_RS11190;old_locus_tag=C9E95_11470 NZ_PYJW01000104.1 Protein Homology CDS 13556 14860 . + 0 ID=cds-WP_000057014.1;Parent=gene-C9E95_RS11190;Dbxref=GenBank:WP_000057014.1;Name=WP_000057014.1;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459674.1;locus_tag=C9E95_RS11190;product=tricarballylate/proton symporter TcuC;protein_id=WP_000057014.1;transl_table=11 NZ_PYJW01000104.1 RefSeq gene 14909 15241 . - . ID=gene-C9E95_RS11195;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=C9E95_RS11195;old_locus_tag=C9E95_11475 NZ_PYJW01000104.1 Protein Homology CDS 14909 15241 . - 0 ID=cds-WP_000722258.1;Parent=gene-C9E95_RS11195;Dbxref=GenBank:WP_000722258.1;Name=WP_000722258.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459673.1;locus_tag=C9E95_RS11195;product=ChiQ/YbfN family lipoprotein;protein_id=WP_000722258.1;transl_table=11 NZ_PYJW01000104.1 RefSeq gene 15291 16697 . - . ID=gene-C9E95_RS11200;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=C9E95_RS11200;old_locus_tag=C9E95_11480 NZ_PYJW01000104.1 Protein Homology CDS 15291 16697 . - 0 ID=cds-WP_001258803.1;Parent=gene-C9E95_RS11200;Dbxref=GenBank:WP_001258803.1;Name=WP_001258803.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459672.1;locus_tag=C9E95_RS11200;product=chitoporin ChiP;protein_id=WP_001258803.1;transl_table=11 ##sequence-region NZ_PYJW01000005.1 1 16994 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000005.1 RefSeq region 1 16994 . + . ID=NZ_PYJW01000005.1:1..16994;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000005.1 RefSeq pseudogene 1 285 . + . ID=gene-C9E95_RS23230;Name=C9E95_RS23230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23230;old_locus_tag=C9E95_00405;partial=true;pseudo=true;start_range=.,1 NZ_PYJW01000005.1 Protein Homology CDS 1 285 . + 0 ID=cds-C9E95_RS23230;Parent=gene-C9E95_RS23230;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001259151.1;locus_tag=C9E95_RS23230;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_PYJW01000005.1 RefSeq gene 422 1828 . + . ID=gene-C9E95_RS00415;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=C9E95_RS00415;old_locus_tag=C9E95_00410 NZ_PYJW01000005.1 Protein Homology CDS 422 1828 . + 0 ID=cds-WP_000043532.1;Parent=gene-C9E95_RS00415;Dbxref=GenBank:WP_000043532.1;Name=WP_000043532.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461026.1;locus_tag=C9E95_RS00415;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_000043532.1;transl_table=11 NZ_PYJW01000005.1 RefSeq gene 2065 3231 . + . ID=gene-C9E95_RS00425;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=C9E95_RS00425;old_locus_tag=C9E95_00420 NZ_PYJW01000005.1 Protein Homology CDS 2065 3231 . + 0 ID=cds-WP_080203694.1;Parent=gene-C9E95_RS00425;Dbxref=GenBank:WP_080203694.1;Name=WP_080203694.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461025.1;locus_tag=C9E95_RS00425;product=UDP-glucose 6-dehydrogenase;protein_id=WP_080203694.1;transl_table=11 NZ_PYJW01000005.1 RefSeq gene 3374 4357 . + . ID=gene-C9E95_RS00430;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=C9E95_RS00430;old_locus_tag=C9E95_00425 NZ_PYJW01000005.1 Protein Homology CDS 3374 4357 . + 0 ID=cds-WP_000215250.1;Parent=gene-C9E95_RS00430;Dbxref=GenBank:WP_000215250.1;Name=WP_000215250.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461024.1;locus_tag=C9E95_RS00430;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WP_000215250.1;transl_table=11 NZ_PYJW01000005.1 RefSeq gene 4452 5063 . - . ID=gene-C9E95_RS00435;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=C9E95_RS00435;old_locus_tag=C9E95_00430 NZ_PYJW01000005.1 Protein Homology CDS 4452 5063 . - 0 ID=cds-WP_000954847.1;Parent=gene-C9E95_RS00435;Dbxref=GenBank:WP_000954847.1;Name=WP_000954847.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461023.1;locus_tag=C9E95_RS00435;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_000954847.1;transl_table=11 NZ_PYJW01000005.1 RefSeq gene 5057 5833 . - . ID=gene-C9E95_RS00440;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=C9E95_RS00440;old_locus_tag=C9E95_00435 NZ_PYJW01000005.1 Protein Homology CDS 5057 5833 . - 0 ID=cds-WP_000880125.1;Parent=gene-C9E95_RS00440;Dbxref=GenBank:WP_000880125.1;Name=WP_000880125.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461022.1;locus_tag=C9E95_RS00440;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_000880125.1;transl_table=11 NZ_PYJW01000005.1 RefSeq gene 5815 6552 . - . ID=gene-C9E95_RS00445;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=C9E95_RS00445;old_locus_tag=C9E95_00440 NZ_PYJW01000005.1 Protein Homology CDS 5815 6552 . - 0 ID=cds-WP_000586406.1;Parent=gene-C9E95_RS00445;Dbxref=GenBank:WP_000586406.1;Name=WP_000586406.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461021.1;locus_tag=C9E95_RS00445;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_000586406.1;transl_table=11 NZ_PYJW01000005.1 RefSeq gene 6552 7142 . - . ID=gene-C9E95_RS00450;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=C9E95_RS00450;old_locus_tag=C9E95_00445 NZ_PYJW01000005.1 Protein Homology CDS 6552 7142 . - 0 ID=cds-WP_001103591.1;Parent=gene-C9E95_RS00450;Dbxref=GenBank:WP_001103591.1;Name=WP_001103591.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=C9E95_RS00450;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_001103591.1;transl_table=11 NZ_PYJW01000005.1 RefSeq gene 7142 8209 . - . ID=gene-C9E95_RS00455;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=C9E95_RS00455;old_locus_tag=C9E95_00450 NZ_PYJW01000005.1 Protein Homology CDS 7142 8209 . - 0 ID=cds-WP_021294063.1;Parent=gene-C9E95_RS00455;Dbxref=GenBank:WP_021294063.1;Name=WP_021294063.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461019.1;locus_tag=C9E95_RS00455;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_021294063.1;transl_table=11 NZ_PYJW01000005.1 RefSeq gene 8206 9285 . - . ID=gene-C9E95_RS00460;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=C9E95_RS00460;old_locus_tag=C9E95_00455 NZ_PYJW01000005.1 Protein Homology CDS 8206 9285 . - 0 ID=cds-WP_000102715.1;Parent=gene-C9E95_RS00460;Dbxref=GenBank:WP_000102715.1;Name=WP_000102715.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461018.1;locus_tag=C9E95_RS00460;product=histidinol-phosphate transaminase;protein_id=WP_000102715.1;transl_table=11 NZ_PYJW01000005.1 RefSeq gene 9282 10586 . - . ID=gene-C9E95_RS00465;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=C9E95_RS00465;old_locus_tag=C9E95_00460 NZ_PYJW01000005.1 Protein Homology CDS 9282 10586 . - 0 ID=cds-WP_000009622.1;Parent=gene-C9E95_RS00465;Dbxref=GenBank:WP_000009622.1;Name=WP_000009622.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461017.1;locus_tag=C9E95_RS00465;product=histidinol dehydrogenase;protein_id=WP_000009622.1;transl_table=11 NZ_PYJW01000005.1 RefSeq gene 10689 11588 . - . ID=gene-C9E95_RS00470;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=C9E95_RS00470;old_locus_tag=C9E95_00465 NZ_PYJW01000005.1 Protein Homology CDS 10689 11588 . - 0 ID=cds-WP_000886600.1;Parent=gene-C9E95_RS00470;Dbxref=GenBank:WP_000886600.1;Name=WP_000886600.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=C9E95_RS00470;product=ATP phosphoribosyltransferase;protein_id=WP_000886600.1;transl_table=11 NZ_PYJW01000005.1 cmsearch sequence_feature 11635 11758 . - . ID=id-NZ_PYJW01000005.1:11635..11758;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_PYJW01000005.1 RefSeq gene 11734 11784 . - . ID=gene-C9E95_RS00475;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=C9E95_RS00475;old_locus_tag=C9E95_00470 NZ_PYJW01000005.1 Protein Homology CDS 11734 11784 . - 0 ID=cds-WP_001364200.1;Parent=gene-C9E95_RS00475;Dbxref=GenBank:WP_001364200.1;Name=WP_001364200.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=C9E95_RS00475;product=his operon leader peptide;protein_id=WP_001364200.1;transl_table=11 NZ_PYJW01000005.1 RefSeq gene 11947 12771 . + . ID=gene-C9E95_RS00480;Name=C9E95_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00480;old_locus_tag=C9E95_00475 NZ_PYJW01000005.1 Protein Homology CDS 11947 12771 . + 0 ID=cds-WP_000754712.1;Parent=gene-C9E95_RS00480;Dbxref=GenBank:WP_000754712.1;Name=WP_000754712.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461015.1;locus_tag=C9E95_RS00480;product=SDR family oxidoreductase;protein_id=WP_000754712.1;transl_table=11 NZ_PYJW01000005.1 RefSeq gene 12817 13731 . + . ID=gene-C9E95_RS00485;Name=C9E95_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00485;old_locus_tag=C9E95_00480 NZ_PYJW01000005.1 Protein Homology CDS 12817 13731 . + 0 ID=cds-WP_000803316.1;Parent=gene-C9E95_RS00485;Dbxref=GenBank:WP_000803316.1;Name=WP_000803316.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461014.1;locus_tag=C9E95_RS00485;product=LysR family transcriptional regulator;protein_id=WP_000803316.1;transl_table=11 NZ_PYJW01000005.1 RefSeq gene 13965 14027 . + . ID=gene-C9E95_RS00490;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=C9E95_RS00490;old_locus_tag=C9E95_00485 NZ_PYJW01000005.1 Protein Homology CDS 13965 14027 . + 0 ID=cds-WP_096335044.1;Parent=gene-C9E95_RS00490;Dbxref=GenBank:WP_096335044.1;Name=WP_096335044.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=C9E95_RS00490;product=membrane protein YoeI;protein_id=WP_096335044.1;transl_table=11 NZ_PYJW01000005.1 RefSeq gene 14017 15375 . + . ID=gene-C9E95_RS00495;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=C9E95_RS00495;old_locus_tag=C9E95_00490 NZ_PYJW01000005.1 Protein Homology CDS 14017 15375 . + 0 ID=cds-WP_001519005.1;Parent=gene-C9E95_RS00495;Dbxref=GenBank:WP_001519005.1;Name=WP_001519005.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=C9E95_RS00495;product=putrescine/proton symporter PlaP;protein_id=WP_001519005.1;transl_table=11 NZ_PYJW01000005.1 RefSeq gene 15511 16941 . - . ID=gene-C9E95_RS00500;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=C9E95_RS00500;old_locus_tag=C9E95_00495 NZ_PYJW01000005.1 Protein Homology CDS 15511 16941 . - 0 ID=cds-WP_000216702.1;Parent=gene-C9E95_RS00500;Dbxref=GenBank:WP_000216702.1;Name=WP_000216702.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461012.1;locus_tag=C9E95_RS00500;product=exodeoxyribonuclease I;protein_id=WP_000216702.1;transl_table=11 ##sequence-region NZ_PYJW01000052.1 1 446 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000052.1 RefSeq region 1 446 . + . ID=NZ_PYJW01000052.1:1..446;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000052.1 RefSeq gene 1 153 . + . ID=gene-C9E95_RS04155;Name=C9E95_RS04155;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E95_RS04155;old_locus_tag=C9E95_04265;partial=true;start_range=.,1 NZ_PYJW01000052.1 cmsearch ncRNA 1 153 . + . ID=rna-C9E95_RS04155;Parent=gene-C9E95_RS04155;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS04155;partial=true;product=RtT sRNA;start_range=.,1 NZ_PYJW01000052.1 cmsearch exon 1 153 . + . ID=exon-C9E95_RS04155-1;Parent=rna-C9E95_RS04155;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS04155;partial=true;product=RtT sRNA;start_range=.,1 NZ_PYJW01000052.1 RefSeq gene 188 263 . + . ID=gene-C9E95_RS04160;Name=C9E95_RS04160;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS04160;old_locus_tag=C9E95_04270 NZ_PYJW01000052.1 tRNAscan-SE tRNA 188 263 . + . ID=rna-C9E95_RS04160;Parent=gene-C9E95_RS04160;anticodon=(pos:221..223);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS04160;product=tRNA-Lys NZ_PYJW01000052.1 tRNAscan-SE exon 188 263 . + . ID=exon-C9E95_RS04160-1;Parent=rna-C9E95_RS04160;anticodon=(pos:221..223);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS04160;product=tRNA-Lys NZ_PYJW01000052.1 RefSeq gene 293 418 . + . ID=gene-C9E95_RS04165;Name=C9E95_RS04165;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E95_RS04165;old_locus_tag=C9E95_04275 NZ_PYJW01000052.1 cmsearch ncRNA 293 418 . + . ID=rna-C9E95_RS04165;Parent=gene-C9E95_RS04165;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS04165;product=RtT sRNA NZ_PYJW01000052.1 cmsearch exon 293 418 . + . ID=exon-C9E95_RS04165-1;Parent=rna-C9E95_RS04165;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E95_RS04165;product=RtT sRNA ##sequence-region NZ_PYJW01000158.1 1 16983 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000158.1 RefSeq region 1 16983 . + . ID=NZ_PYJW01000158.1:1..16983;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000158.1 RefSeq gene 194 2386 . + . ID=gene-C9E95_RS18325;Name=sinH;gbkey=Gene;gene=sinH;gene_biotype=protein_coding;locus_tag=C9E95_RS18325;old_locus_tag=C9E95_18780 NZ_PYJW01000158.1 Protein Homology CDS 194 2386 . + 0 ID=cds-WP_080203849.1;Parent=gene-C9E95_RS18325;Dbxref=GenBank:WP_080203849.1;Name=WP_080203849.1;gbkey=CDS;gene=sinH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=C9E95_RS18325;product=intimin-like inverse autotransporter SinH;protein_id=WP_080203849.1;transl_table=11 NZ_PYJW01000158.1 RefSeq gene 2444 3415 . + . ID=gene-C9E95_RS18330;Name=C9E95_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18330;old_locus_tag=C9E95_18785 NZ_PYJW01000158.1 Protein Homology CDS 2444 3415 . + 0 ID=cds-WP_080203848.1;Parent=gene-C9E95_RS18330;Dbxref=GenBank:WP_080203848.1;Name=WP_080203848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461451.1;locus_tag=C9E95_RS18330;product=SinI family autotransporter-associated protein;protein_id=WP_080203848.1;transl_table=11 NZ_PYJW01000158.1 RefSeq gene 3535 9138 . + . ID=gene-C9E95_RS18335;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=C9E95_RS18335;old_locus_tag=C9E95_18790 NZ_PYJW01000158.1 Protein Homology CDS 3535 9138 . + 0 ID=cds-WP_135369872.1;Parent=gene-C9E95_RS18335;Dbxref=GenBank:WP_135369872.1;Name=WP_135369872.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461450.1;locus_tag=C9E95_RS18335;product=DUF823/DUF824 repeat adhesin RatA;protein_id=WP_135369872.1;transl_table=11 NZ_PYJW01000158.1 RefSeq gene 9304 16611 . + . ID=gene-C9E95_RS18340;Name=ratB;gbkey=Gene;gene=ratB;gene_biotype=protein_coding;locus_tag=C9E95_RS18340;old_locus_tag=C9E95_18795 NZ_PYJW01000158.1 Protein Homology CDS 9304 16611 . + 0 ID=cds-WP_135369873.1;Parent=gene-C9E95_RS18340;Dbxref=GenBank:WP_135369873.1;Name=WP_135369873.1;gbkey=CDS;gene=ratB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=C9E95_RS18340;product=DUF823/DUF824 repeat adhesin RatB;protein_id=WP_135369873.1;transl_table=11 NZ_PYJW01000158.1 RefSeq pseudogene 16626 16712 . + . ID=gene-C9E95_RS18345;Name=C9E95_RS18345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS18345;old_locus_tag=C9E95_18800;partial=true;pseudo=true;start_range=.,16626 NZ_PYJW01000158.1 Protein Homology CDS 16626 16712 . + 0 ID=cds-C9E95_RS18345;Parent=gene-C9E95_RS18345;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=C9E95_RS18345;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,16626;transl_table=11 ##sequence-region NZ_PYJW01000118.1 1 16887 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000118.1 RefSeq region 1 16887 . + . ID=NZ_PYJW01000118.1:1..16887;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000118.1 RefSeq gene 144 872 . + . ID=gene-C9E95_RS13040;Name=C9E95_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13040;old_locus_tag=C9E95_13375 NZ_PYJW01000118.1 Protein Homology CDS 144 872 . + 0 ID=cds-WP_000587744.1;Parent=gene-C9E95_RS13040;Dbxref=GenBank:WP_000587744.1;Name=WP_000587744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463061.1;locus_tag=C9E95_RS13040;product=hypothetical protein;protein_id=WP_000587744.1;transl_table=11 NZ_PYJW01000118.1 RefSeq gene 1134 2075 . + . ID=gene-C9E95_RS13045;Name=panS;gbkey=Gene;gene=panS;gene_biotype=protein_coding;locus_tag=C9E95_RS13045;old_locus_tag=C9E95_13380 NZ_PYJW01000118.1 Protein Homology CDS 1134 2075 . + 0 ID=cds-WP_000881647.1;Parent=gene-C9E95_RS13045;Dbxref=GenBank:WP_000881647.1;Name=WP_000881647.1;gbkey=CDS;gene=panS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463060.1;locus_tag=C9E95_RS13045;product=ketopantoate/pantoate/pantothenate transporter PanS;protein_id=WP_000881647.1;transl_table=11 NZ_PYJW01000118.1 RefSeq gene 2173 2445 . + . ID=gene-C9E95_RS13050;Name=C9E95_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13050;old_locus_tag=C9E95_13385 NZ_PYJW01000118.1 Protein Homology CDS 2173 2445 . + 0 ID=cds-WP_001207628.1;Parent=gene-C9E95_RS13050;Dbxref=GenBank:WP_001207628.1;Name=WP_001207628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463059.1;locus_tag=C9E95_RS13050;product=DUF3811 domain-containing protein;protein_id=WP_001207628.1;transl_table=11 NZ_PYJW01000118.1 RefSeq gene 2442 3311 . - . ID=gene-C9E95_RS13055;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=C9E95_RS13055;old_locus_tag=C9E95_13390 NZ_PYJW01000118.1 Protein Homology CDS 2442 3311 . - 0 ID=cds-WP_000954618.1;Parent=gene-C9E95_RS13055;Dbxref=GenBank:WP_000954618.1;Name=WP_000954618.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463058.1;locus_tag=C9E95_RS13055;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_000954618.1;transl_table=11 NZ_PYJW01000118.1 RefSeq gene 3358 3897 . - . ID=gene-C9E95_RS13060;Name=C9E95_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13060;old_locus_tag=C9E95_13395 NZ_PYJW01000118.1 Protein Homology CDS 3358 3897 . - 0 ID=cds-WP_001096724.1;Parent=gene-C9E95_RS13060;Dbxref=GenBank:WP_001096724.1;Name=WP_001096724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=C9E95_RS13060;product=DUF2058 domain-containing protein;protein_id=WP_001096724.1;transl_table=11 NZ_PYJW01000118.1 RefSeq gene 3932 4033 . - . ID=gene-C9E95_RS13065;Name=C9E95_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13065;old_locus_tag=C9E95_13400 NZ_PYJW01000118.1 Protein Homology CDS 3932 4033 . - 0 ID=cds-WP_031606603.1;Parent=gene-C9E95_RS13065;Dbxref=GenBank:WP_031606603.1;Name=WP_031606603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463056.1;locus_tag=C9E95_RS13065;product=hypothetical protein;protein_id=WP_031606603.1;transl_table=11 NZ_PYJW01000118.1 RefSeq gene 4105 4794 . + . ID=gene-C9E95_RS13070;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=C9E95_RS13070;old_locus_tag=C9E95_13405 NZ_PYJW01000118.1 Protein Homology CDS 4105 4794 . + 0 ID=cds-WP_000421776.1;Parent=gene-C9E95_RS13070;Dbxref=GenBank:WP_000421776.1;Name=WP_000421776.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463055.1;locus_tag=C9E95_RS13070;product=dipeptidase PepE;protein_id=WP_000421776.1;transl_table=11 NZ_PYJW01000118.1 RefSeq gene 4870 6501 . - . ID=gene-C9E95_RS13075;Name=C9E95_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13075;old_locus_tag=C9E95_13410 NZ_PYJW01000118.1 Protein Homology CDS 4870 6501 . - 0 ID=cds-WP_000956811.1;Parent=gene-C9E95_RS13075;Dbxref=GenBank:WP_000956811.1;Name=WP_000956811.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463054.1;locus_tag=C9E95_RS13075;product=Na/Pi cotransporter family protein;protein_id=WP_000956811.1;transl_table=11 NZ_PYJW01000118.1 RefSeq gene 6768 10451 . - . ID=gene-C9E95_RS13080;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=C9E95_RS13080;old_locus_tag=C9E95_13415 NZ_PYJW01000118.1 Protein Homology CDS 6768 10451 . - 0 ID=cds-WP_135369847.1;Parent=gene-C9E95_RS13080;Dbxref=GenBank:WP_135369847.1;Name=WP_135369847.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312964.1;locus_tag=C9E95_RS13080;product=methionine synthase;protein_id=WP_135369847.1;transl_table=11 NZ_PYJW01000118.1 RefSeq gene 10755 11579 . + . ID=gene-C9E95_RS13085;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=C9E95_RS13085;old_locus_tag=C9E95_13420 NZ_PYJW01000118.1 Protein Homology CDS 10755 11579 . + 0 ID=cds-WP_000226434.1;Parent=gene-C9E95_RS13085;Dbxref=GenBank:WP_000226434.1;Name=WP_000226434.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463052.1;locus_tag=C9E95_RS13085;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_000226434.1;transl_table=11 NZ_PYJW01000118.1 RefSeq gene 11590 11997 . + . ID=gene-C9E95_RS13090;Name=C9E95_RS13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS13090;old_locus_tag=C9E95_13425 NZ_PYJW01000118.1 Protein Homology CDS 11590 11997 . + 0 ID=cds-WP_077677840.1;Parent=gene-C9E95_RS13090;Dbxref=GenBank:WP_077677840.1;Name=WP_077677840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463051.1;locus_tag=C9E95_RS13090;product=ASCH domain-containing protein;protein_id=WP_077677840.1;transl_table=11 NZ_PYJW01000118.1 RefSeq gene 11961 13712 . - . ID=gene-C9E95_RS13095;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=C9E95_RS13095;old_locus_tag=C9E95_13430 NZ_PYJW01000118.1 Protein Homology CDS 11961 13712 . - 0 ID=cds-WP_001137275.1;Parent=gene-C9E95_RS13095;Dbxref=GenBank:WP_001137275.1;Name=WP_001137275.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463050.1;locus_tag=C9E95_RS13095;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_001137275.1;transl_table=11 NZ_PYJW01000118.1 RefSeq gene 13814 15118 . - . ID=gene-C9E95_RS13100;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=C9E95_RS13100;old_locus_tag=C9E95_13435 NZ_PYJW01000118.1 Protein Homology CDS 13814 15118 . - 0 ID=cds-WP_000857878.1;Parent=gene-C9E95_RS13100;Dbxref=GenBank:WP_000857878.1;Name=WP_000857878.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=C9E95_RS13100;product=isocitrate lyase;protein_id=WP_000857878.1;transl_table=11 NZ_PYJW01000118.1 RefSeq gene 15150 16751 . - . ID=gene-C9E95_RS13105;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=C9E95_RS13105;old_locus_tag=C9E95_13440 NZ_PYJW01000118.1 Protein Homology CDS 15150 16751 . - 0 ID=cds-WP_023204793.1;Parent=gene-C9E95_RS13105;Dbxref=GenBank:WP_023204793.1;Name=WP_023204793.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463048.1;locus_tag=C9E95_RS13105;product=malate synthase A;protein_id=WP_023204793.1;transl_table=11 ##sequence-region NZ_PYJW01000027.1 1 100661 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000027.1 RefSeq region 1 100661 . + . ID=NZ_PYJW01000027.1:1..100661;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000027.1 RefSeq gene 51 1097 . - . ID=gene-C9E95_RS01205;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=C9E95_RS01205;old_locus_tag=C9E95_01220 NZ_PYJW01000027.1 Protein Homology CDS 51 1097 . - 0 ID=cds-WP_000126597.1;Parent=gene-C9E95_RS01205;Dbxref=GenBank:WP_000126597.1;Name=WP_000126597.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460134.1;locus_tag=C9E95_RS01205;product=dihydroorotase;protein_id=WP_000126597.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 1201 1761 . - . ID=gene-C9E95_RS01210;Name=C9E95_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01210;old_locus_tag=C9E95_01225 NZ_PYJW01000027.1 Protein Homology CDS 1201 1761 . - 0 ID=cds-WP_000713054.1;Parent=gene-C9E95_RS01210;Dbxref=GenBank:WP_000713054.1;Name=WP_000713054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460135.1;locus_tag=C9E95_RS01210;product=lipoprotein;protein_id=WP_000713054.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 1886 2533 . - . ID=gene-C9E95_RS01215;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=C9E95_RS01215;old_locus_tag=C9E95_01230 NZ_PYJW01000027.1 Protein Homology CDS 1886 2533 . - 0 ID=cds-WP_000780893.1;Parent=gene-C9E95_RS01215;Dbxref=GenBank:WP_000780893.1;Name=WP_000780893.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460136.1;locus_tag=C9E95_RS01215;product=glutaredoxin 2;protein_id=WP_000780893.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 2597 3805 . - . ID=gene-C9E95_RS01220;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=C9E95_RS01220;old_locus_tag=C9E95_01235 NZ_PYJW01000027.1 Protein Homology CDS 2597 3805 . - 0 ID=cds-WP_000092178.1;Parent=gene-C9E95_RS01220;Dbxref=GenBank:WP_000092178.1;Name=WP_000092178.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=C9E95_RS01220;product=multidrug efflux MFS transporter MdtH;protein_id=WP_000092178.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 4042 4626 . + . ID=gene-C9E95_RS01225;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=C9E95_RS01225;old_locus_tag=C9E95_01240 NZ_PYJW01000027.1 Protein Homology CDS 4042 4626 . + 0 ID=cds-WP_000468204.1;Parent=gene-C9E95_RS01225;Dbxref=GenBank:WP_000468204.1;Name=WP_000468204.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460138.1;locus_tag=C9E95_RS01225;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_000468204.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 4662 5309 . + . ID=gene-C9E95_RS01230;Name=C9E95_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01230;old_locus_tag=C9E95_01245 NZ_PYJW01000027.1 Protein Homology CDS 4662 5309 . + 0 ID=cds-WP_000873045.1;Parent=gene-C9E95_RS01230;Dbxref=GenBank:WP_000873045.1;Name=WP_000873045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460139.1;locus_tag=C9E95_RS01230;product=YceH family protein;protein_id=WP_000873045.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 5311 6234 . + . ID=gene-C9E95_RS01235;Name=C9E95_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01235;old_locus_tag=C9E95_01250 NZ_PYJW01000027.1 Protein Homology CDS 5311 6234 . + 0 ID=cds-WP_023993493.1;Parent=gene-C9E95_RS01235;Dbxref=GenBank:WP_023993493.1;Name=WP_023993493.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460140.1;locus_tag=C9E95_RS01235;product=Gfo/Idh/MocA family protein;protein_id=WP_023993493.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 6538 8073 . + . ID=gene-C9E95_RS01240;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=C9E95_RS01240;old_locus_tag=C9E95_01255 NZ_PYJW01000027.1 Protein Homology CDS 6538 8073 . + 0 ID=cds-WP_001537775.1;Parent=gene-C9E95_RS01240;Dbxref=GenBank:WP_001537775.1;Name=WP_001537775.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226258.1;locus_tag=C9E95_RS01240;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_001537775.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 8155 8577 . - . ID=gene-C9E95_RS01245;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=C9E95_RS01245;old_locus_tag=C9E95_01260 NZ_PYJW01000027.1 Protein Homology CDS 8155 8577 . - 0 ID=cds-WP_000197547.1;Parent=gene-C9E95_RS01245;Dbxref=GenBank:WP_000197547.1;Name=WP_000197547.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460142.1;locus_tag=C9E95_RS01245;product=flagella biosynthesis chaperone FlgN;protein_id=WP_000197547.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 8582 8875 . - . ID=gene-C9E95_RS01250;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=C9E95_RS01250;old_locus_tag=C9E95_01265 NZ_PYJW01000027.1 Protein Homology CDS 8582 8875 . - 0 ID=cds-WP_000020893.1;Parent=gene-C9E95_RS01250;Dbxref=GenBank:WP_000020893.1;Name=WP_000020893.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460143.1;locus_tag=C9E95_RS01250;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000020893.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 8967 9626 . - . ID=gene-C9E95_RS01255;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=C9E95_RS01255;old_locus_tag=C9E95_01270 NZ_PYJW01000027.1 Protein Homology CDS 8967 9626 . - 0 ID=cds-WP_001194074.1;Parent=gene-C9E95_RS01255;Dbxref=GenBank:WP_001194074.1;Name=WP_001194074.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460144.1;locus_tag=C9E95_RS01255;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_001194074.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 9783 10199 . + . ID=gene-C9E95_RS01260;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=C9E95_RS01260;old_locus_tag=C9E95_01280 NZ_PYJW01000027.1 Protein Homology CDS 9783 10199 . + 0 ID=cds-WP_000887043.1;Parent=gene-C9E95_RS01260;Dbxref=GenBank:WP_000887043.1;Name=WP_000887043.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460145.1;locus_tag=C9E95_RS01260;product=flagellar basal body rod protein FlgB;protein_id=WP_000887043.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 10203 10607 . + . ID=gene-C9E95_RS01265;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=C9E95_RS01265;old_locus_tag=C9E95_01285 NZ_PYJW01000027.1 Protein Homology CDS 10203 10607 . + 0 ID=cds-WP_001196448.1;Parent=gene-C9E95_RS01265;Dbxref=GenBank:WP_001196448.1;Name=WP_001196448.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=C9E95_RS01265;product=flagellar basal body rod protein FlgC;protein_id=WP_001196448.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 10619 11317 . + . ID=gene-C9E95_RS01270;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=C9E95_RS01270;old_locus_tag=C9E95_01290 NZ_PYJW01000027.1 Protein Homology CDS 10619 11317 . + 0 ID=cds-WP_000020450.1;Parent=gene-C9E95_RS01270;Dbxref=GenBank:WP_000020450.1;Name=WP_000020450.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460147.1;locus_tag=C9E95_RS01270;product=flagellar hook assembly protein FlgD;protein_id=WP_000020450.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 11344 12555 . + . ID=gene-C9E95_RS01275;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=C9E95_RS01275;old_locus_tag=C9E95_01295 NZ_PYJW01000027.1 Protein Homology CDS 11344 12555 . + 0 ID=cds-WP_000010563.1;Parent=gene-C9E95_RS01275;Dbxref=GenBank:WP_000010563.1;Name=WP_000010563.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460148.1;locus_tag=C9E95_RS01275;product=flagellar hook protein FlgE;protein_id=WP_000010563.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 12576 13331 . + . ID=gene-C9E95_RS01280;Name=C9E95_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01280;old_locus_tag=C9E95_01300 NZ_PYJW01000027.1 Protein Homology CDS 12576 13331 . + 0 ID=cds-WP_000349278.1;Parent=gene-C9E95_RS01280;Dbxref=GenBank:WP_000349278.1;Name=WP_000349278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460149.1;locus_tag=C9E95_RS01280;product=flagellar basal body rod protein FlgF;protein_id=WP_000349278.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 13345 14127 . + . ID=gene-C9E95_RS01285;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=C9E95_RS01285;old_locus_tag=C9E95_01305 NZ_PYJW01000027.1 Protein Homology CDS 13345 14127 . + 0 ID=cds-WP_000625851.1;Parent=gene-C9E95_RS01285;Dbxref=GenBank:WP_000625851.1;Name=WP_000625851.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=C9E95_RS01285;product=flagellar basal-body rod protein FlgG;protein_id=WP_000625851.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 14181 14879 . + . ID=gene-C9E95_RS01290;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=C9E95_RS01290;old_locus_tag=C9E95_01310 NZ_PYJW01000027.1 Protein Homology CDS 14181 14879 . + 0 ID=cds-WP_001174897.1;Parent=gene-C9E95_RS01290;Dbxref=GenBank:WP_001174897.1;Name=WP_001174897.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460151.1;locus_tag=C9E95_RS01290;product=flagellar basal body L-ring protein FlgH;protein_id=WP_001174897.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 14891 15988 . + . ID=gene-C9E95_RS01295;Name=C9E95_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01295;old_locus_tag=C9E95_01315 NZ_PYJW01000027.1 Protein Homology CDS 14891 15988 . + 0 ID=cds-WP_023217140.1;Parent=gene-C9E95_RS01295;Dbxref=GenBank:WP_023217140.1;Name=WP_023217140.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460152.1;locus_tag=C9E95_RS01295;product=flagellar basal body P-ring protein FlgI;protein_id=WP_023217140.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 15988 16938 . + . ID=gene-C9E95_RS01300;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=C9E95_RS01300;old_locus_tag=C9E95_01320 NZ_PYJW01000027.1 Protein Homology CDS 15988 16938 . + 0 ID=cds-WP_000578685.1;Parent=gene-C9E95_RS01300;Dbxref=GenBank:WP_000578685.1;Name=WP_000578685.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460153.1;locus_tag=C9E95_RS01300;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_000578685.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 17003 18664 . + . ID=gene-C9E95_RS01305;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=C9E95_RS01305;old_locus_tag=C9E95_01325 NZ_PYJW01000027.1 Protein Homology CDS 17003 18664 . + 0 ID=cds-WP_000096425.1;Parent=gene-C9E95_RS01305;Dbxref=GenBank:WP_000096425.1;Name=WP_000096425.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460154.1;locus_tag=C9E95_RS01305;product=flagellar hook-associated protein FlgK;protein_id=WP_000096425.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 18679 19632 . + . ID=gene-C9E95_RS01310;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=C9E95_RS01310;old_locus_tag=C9E95_01330 NZ_PYJW01000027.1 Protein Homology CDS 18679 19632 . + 0 ID=cds-WP_001223032.1;Parent=gene-C9E95_RS01310;Dbxref=GenBank:WP_001223032.1;Name=WP_001223032.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460155.1;locus_tag=C9E95_RS01310;product=flagellar hook-associated protein FlgL;protein_id=WP_001223032.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 19879 23085 . - . ID=gene-C9E95_RS01315;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=C9E95_RS01315;old_locus_tag=C9E95_01340 NZ_PYJW01000027.1 Protein Homology CDS 19879 23085 . - 0 ID=cds-WP_080203916.1;Parent=gene-C9E95_RS01315;Dbxref=GenBank:WP_080203916.1;Name=WP_080203916.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460156.1;locus_tag=C9E95_RS01315;product=ribonuclease E;protein_id=WP_080203916.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 23659 24618 . + . ID=gene-C9E95_RS01325;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=C9E95_RS01325;old_locus_tag=C9E95_01350 NZ_PYJW01000027.1 Protein Homology CDS 23659 24618 . + 0 ID=cds-WP_000846314.1;Parent=gene-C9E95_RS01325;Dbxref=GenBank:WP_000846314.1;Name=WP_000846314.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460157.1;locus_tag=C9E95_RS01325;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_000846314.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 24774 25517 . + . ID=gene-C9E95_RS01330;Name=C9E95_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01330;old_locus_tag=C9E95_01355 NZ_PYJW01000027.1 Protein Homology CDS 24774 25517 . + 0 ID=cds-WP_023602527.1;Parent=gene-C9E95_RS01330;Dbxref=GenBank:WP_023602527.1;Name=WP_023602527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460158.1;locus_tag=C9E95_RS01330;product=DUF3053 domain-containing protein;protein_id=WP_023602527.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 26015 26599 . - . ID=gene-C9E95_RS01340;Name=C9E95_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01340;old_locus_tag=C9E95_01365 NZ_PYJW01000027.1 Protein Homology CDS 26015 26599 . - 0 ID=cds-WP_001137604.1;Parent=gene-C9E95_RS01340;Dbxref=GenBank:WP_001137604.1;Name=WP_001137604.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460159.1;locus_tag=C9E95_RS01340;product=Maf family protein;protein_id=WP_001137604.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 26797 27318 . + . ID=gene-C9E95_RS01345;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=C9E95_RS01345;old_locus_tag=C9E95_01370 NZ_PYJW01000027.1 Protein Homology CDS 26797 27318 . + 0 ID=cds-WP_001174492.1;Parent=gene-C9E95_RS01345;Dbxref=GenBank:WP_001174492.1;Name=WP_001174492.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=C9E95_RS01345;product=23S rRNA accumulation protein YceD;protein_id=WP_001174492.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 27370 27543 . + . ID=gene-C9E95_RS01350;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=C9E95_RS01350;old_locus_tag=C9E95_01375 NZ_PYJW01000027.1 Protein Homology CDS 27370 27543 . + 0 ID=cds-WP_000290727.1;Parent=gene-C9E95_RS01350;Dbxref=GenBank:WP_000290727.1;Name=WP_000290727.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=C9E95_RS01350;product=50S ribosomal protein L32;protein_id=WP_000290727.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 27677 28756 . + . ID=gene-C9E95_RS01355;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=C9E95_RS01355;old_locus_tag=C9E95_01380 NZ_PYJW01000027.1 Protein Homology CDS 27677 28756 . + 0 ID=cds-WP_001518286.1;Parent=gene-C9E95_RS01355;Dbxref=GenBank:WP_001518286.1;Name=WP_001518286.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460162.1;locus_tag=C9E95_RS01355;product=phosphate acyltransferase PlsX;protein_id=WP_001518286.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 28836 29789 . + . ID=gene-C9E95_RS01360;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=C9E95_RS01360;old_locus_tag=C9E95_01385 NZ_PYJW01000027.1 Protein Homology CDS 28836 29789 . + 0 ID=cds-WP_000288148.1;Parent=gene-C9E95_RS01360;Dbxref=GenBank:WP_000288148.1;Name=WP_000288148.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=C9E95_RS01360;product=beta-ketoacyl-ACP synthase III;protein_id=WP_000288148.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 29805 30734 . + . ID=gene-C9E95_RS01365;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=C9E95_RS01365;old_locus_tag=C9E95_01390 NZ_PYJW01000027.1 Protein Homology CDS 29805 30734 . + 0 ID=cds-WP_001529843.1;Parent=gene-C9E95_RS01365;Dbxref=GenBank:WP_001529843.1;Name=WP_001529843.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460164.1;locus_tag=C9E95_RS01365;product=ACP S-malonyltransferase;protein_id=WP_001529843.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 30747 31481 . + . ID=gene-C9E95_RS01370;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=C9E95_RS01370;old_locus_tag=C9E95_01395 NZ_PYJW01000027.1 Protein Homology CDS 30747 31481 . + 0 ID=cds-WP_000007236.1;Parent=gene-C9E95_RS01370;Dbxref=GenBank:WP_000007236.1;Name=WP_000007236.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=C9E95_RS01370;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_000007236.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 31637 31873 . + . ID=gene-C9E95_RS01375;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=C9E95_RS01375;old_locus_tag=C9E95_01400 NZ_PYJW01000027.1 Protein Homology CDS 31637 31873 . + 0 ID=cds-WP_000103754.1;Parent=gene-C9E95_RS01375;Dbxref=GenBank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=C9E95_RS01375;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 31959 33200 . + . ID=gene-C9E95_RS01380;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=C9E95_RS01380;old_locus_tag=C9E95_01405 NZ_PYJW01000027.1 Protein Homology CDS 31959 33200 . + 0 ID=cds-WP_000044664.1;Parent=gene-C9E95_RS01380;Dbxref=GenBank:WP_000044664.1;Name=WP_000044664.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460167.1;locus_tag=C9E95_RS01380;product=beta-ketoacyl-ACP synthase II;protein_id=WP_000044664.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 33324 34133 . + . ID=gene-C9E95_RS01385;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=C9E95_RS01385;old_locus_tag=C9E95_01410 NZ_PYJW01000027.1 Protein Homology CDS 33324 34133 . + 0 ID=cds-WP_000478660.1;Parent=gene-C9E95_RS01385;Dbxref=GenBank:WP_000478660.1;Name=WP_000478660.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460168.1;locus_tag=C9E95_RS01385;product=aminodeoxychorismate lyase;protein_id=WP_000478660.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 34136 35158 . + . ID=gene-C9E95_RS01390;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=C9E95_RS01390;old_locus_tag=C9E95_01415 NZ_PYJW01000027.1 Protein Homology CDS 34136 35158 . + 0 ID=cds-WP_023993488.1;Parent=gene-C9E95_RS01390;Dbxref=GenBank:WP_023993488.1;Name=WP_023993488.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460169.1;locus_tag=C9E95_RS01390;product=cell division protein YceG;protein_id=WP_023993488.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 35148 35789 . + . ID=gene-C9E95_RS01395;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=C9E95_RS01395;old_locus_tag=C9E95_01420 NZ_PYJW01000027.1 Protein Homology CDS 35148 35789 . + 0 ID=cds-WP_000535396.1;Parent=gene-C9E95_RS01395;Dbxref=GenBank:WP_000535396.1;Name=WP_000535396.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460170.1;locus_tag=C9E95_RS01395;product=dTMP kinase;protein_id=WP_000535396.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 35786 36790 . + . ID=gene-C9E95_RS01400;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=C9E95_RS01400;old_locus_tag=C9E95_01425 NZ_PYJW01000027.1 Protein Homology CDS 35786 36790 . + 0 ID=cds-WP_000872450.1;Parent=gene-C9E95_RS01400;Dbxref=GenBank:WP_000872450.1;Name=WP_000872450.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460171.1;locus_tag=C9E95_RS01400;product=DNA polymerase III subunit delta';protein_id=WP_000872450.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 36801 37598 . + . ID=gene-C9E95_RS01405;Name=C9E95_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01405;old_locus_tag=C9E95_01430 NZ_PYJW01000027.1 Protein Homology CDS 36801 37598 . + 0 ID=cds-WP_000480268.1;Parent=gene-C9E95_RS01405;Dbxref=GenBank:WP_000480268.1;Name=WP_000480268.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460172.1;locus_tag=C9E95_RS01405;product=metal-dependent hydrolase;protein_id=WP_000480268.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 37893 39326 . + . ID=gene-C9E95_RS01410;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=C9E95_RS01410;old_locus_tag=C9E95_01435 NZ_PYJW01000027.1 Protein Homology CDS 37893 39326 . + 0 ID=cds-WP_000475705.1;Parent=gene-C9E95_RS01410;Dbxref=GenBank:WP_000475705.1;Name=WP_000475705.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460173.1;locus_tag=C9E95_RS01410;product=PTS glucose transporter subunit IIBC;protein_id=WP_000475705.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 39411 41585 . - . ID=gene-C9E95_RS01415;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=C9E95_RS01415;old_locus_tag=C9E95_01440 NZ_PYJW01000027.1 Protein Homology CDS 39411 41585 . - 0 ID=cds-WP_000008399.1;Parent=gene-C9E95_RS01415;Dbxref=GenBank:WP_000008399.1;Name=WP_000008399.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=C9E95_RS01415;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WP_000008399.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 41927 42286 . + . ID=gene-C9E95_RS01420;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=C9E95_RS01420;old_locus_tag=C9E95_01445 NZ_PYJW01000027.1 Protein Homology CDS 41927 42286 . + 0 ID=cds-WP_001532068.1;Parent=gene-C9E95_RS01420;Dbxref=GenBank:WP_001532068.1;Name=WP_001532068.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460175.1;locus_tag=C9E95_RS01420;product=purine nucleoside phosphoramidase;protein_id=WP_001532068.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 42289 42663 . + . ID=gene-C9E95_RS01425;Name=C9E95_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01425;old_locus_tag=C9E95_01450 NZ_PYJW01000027.1 Protein Homology CDS 42289 42663 . + 0 ID=cds-WP_000589563.1;Parent=gene-C9E95_RS01425;Dbxref=GenBank:WP_000589563.1;Name=WP_000589563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460176.1;locus_tag=C9E95_RS01425;product=YcfL family protein;protein_id=WP_000589563.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 42677 43315 . + . ID=gene-C9E95_RS01430;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=C9E95_RS01430;old_locus_tag=C9E95_01455 NZ_PYJW01000027.1 Protein Homology CDS 42677 43315 . + 0 ID=cds-WP_000164355.1;Parent=gene-C9E95_RS01430;Dbxref=GenBank:WP_000164355.1;Name=WP_000164355.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460177.1;locus_tag=C9E95_RS01430;product=penicillin-binding protein activator LpoB;protein_id=WP_000164355.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 43296 44120 . + . ID=gene-C9E95_RS01435;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=C9E95_RS01435;old_locus_tag=C9E95_01460 NZ_PYJW01000027.1 Protein Homology CDS 43296 44120 . + 0 ID=cds-WP_001257334.1;Parent=gene-C9E95_RS01435;Dbxref=GenBank:WP_001257334.1;Name=WP_001257334.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460178.1;locus_tag=C9E95_RS01435;product=thiamine kinase;protein_id=WP_001257334.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 44131 45156 . + . ID=gene-C9E95_RS01440;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=C9E95_RS01440;old_locus_tag=C9E95_01465 NZ_PYJW01000027.1 Protein Homology CDS 44131 45156 . + 0 ID=cds-WP_000529340.1;Parent=gene-C9E95_RS01440;Dbxref=GenBank:WP_000529340.1;Name=WP_000529340.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460179.1;locus_tag=C9E95_RS01440;product=beta-N-acetylhexosaminidase;protein_id=WP_000529340.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 45181 45723 . + . ID=gene-C9E95_RS01445;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=C9E95_RS01445;old_locus_tag=C9E95_01470 NZ_PYJW01000027.1 Protein Homology CDS 45181 45723 . + 0 ID=cds-WP_000587943.1;Parent=gene-C9E95_RS01445;Dbxref=GenBank:WP_000587943.1;Name=WP_000587943.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=C9E95_RS01445;product=alpha/beta hydrolase YcfP;protein_id=WP_000587943.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 45977 47281 . + . ID=gene-C9E95_RS01450;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=C9E95_RS01450;old_locus_tag=C9E95_01475 NZ_PYJW01000027.1 Protein Homology CDS 45977 47281 . + 0 ID=cds-WP_000211053.1;Parent=gene-C9E95_RS01450;Dbxref=GenBank:WP_000211053.1;Name=WP_000211053.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=C9E95_RS01450;product=NADH-quinone dehydrogenase;protein_id=WP_000211053.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 47460 47999 . + . ID=gene-C9E95_RS01455;Name=C9E95_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01455;old_locus_tag=C9E95_01480 NZ_PYJW01000027.1 Protein Homology CDS 47460 47999 . + 0 ID=cds-WP_080203917.1;Parent=gene-C9E95_RS01455;Dbxref=GenBank:WP_080203917.1;Name=WP_080203917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460182.1;locus_tag=C9E95_RS01455;product=glycine zipper 2TM domain-containing protein;protein_id=WP_080203917.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 48074 48709 . - . ID=gene-C9E95_RS01460;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=C9E95_RS01460;old_locus_tag=C9E95_01485 NZ_PYJW01000027.1 Protein Homology CDS 48074 48709 . - 0 ID=cds-WP_000205986.1;Parent=gene-C9E95_RS01460;Dbxref=GenBank:WP_000205986.1;Name=WP_000205986.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460183.1;locus_tag=C9E95_RS01460;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WP_000205986.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 48951 49208 . + . ID=gene-C9E95_RS01465;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=C9E95_RS01465;old_locus_tag=C9E95_01490 NZ_PYJW01000027.1 Protein Homology CDS 48951 49208 . + 0 ID=cds-WP_000800159.1;Parent=gene-C9E95_RS01465;Dbxref=GenBank:WP_000800159.1;Name=WP_000800159.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460184.1;locus_tag=C9E95_RS01465;product=multiple stress resistance protein BhsA;protein_id=WP_000800159.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 49305 50270 . - . ID=gene-C9E95_RS01470;Name=ldtC;gbkey=Gene;gene=ldtC;gene_biotype=protein_coding;locus_tag=C9E95_RS01470;old_locus_tag=C9E95_01495 NZ_PYJW01000027.1 Protein Homology CDS 49305 50270 . - 0 ID=cds-WP_000482969.1;Parent=gene-C9E95_RS01470;Dbxref=GenBank:WP_000482969.1;Name=WP_000482969.1;gbkey=CDS;gene=ldtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460185.1;locus_tag=C9E95_RS01470;product=L%2CD-transpeptidase LdtC;protein_id=WP_000482969.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 50418 53864 . - . ID=gene-C9E95_RS01475;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=C9E95_RS01475;old_locus_tag=C9E95_01500 NZ_PYJW01000027.1 Protein Homology CDS 50418 53864 . - 0 ID=cds-WP_001114323.1;Parent=gene-C9E95_RS01475;Dbxref=GenBank:WP_001114323.1;Name=WP_001114323.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460186.1;locus_tag=C9E95_RS01475;product=transcription-repair coupling factor;protein_id=WP_001114323.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 54202 55401 . + . ID=gene-C9E95_RS01480;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=C9E95_RS01480;old_locus_tag=C9E95_01505 NZ_PYJW01000027.1 Protein Homology CDS 54202 55401 . + 0 ID=cds-WP_001518787.1;Parent=gene-C9E95_RS01480;Dbxref=GenBank:WP_001518787.1;Name=WP_001518787.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=C9E95_RS01480;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_001518787.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 55394 56095 . + . ID=gene-C9E95_RS01485;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=C9E95_RS01485;old_locus_tag=C9E95_01510 NZ_PYJW01000027.1 Protein Homology CDS 55394 56095 . + 0 ID=cds-WP_001033714.1;Parent=gene-C9E95_RS01485;Dbxref=GenBank:WP_001033714.1;Name=WP_001033714.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460188.1;locus_tag=C9E95_RS01485;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_001033714.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 56095 57339 . + . ID=gene-C9E95_RS01490;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=C9E95_RS01490;old_locus_tag=C9E95_01515 NZ_PYJW01000027.1 Protein Homology CDS 56095 57339 . + 0 ID=cds-WP_000168091.1;Parent=gene-C9E95_RS01490;Dbxref=GenBank:WP_000168091.1;Name=WP_000168091.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460189.1;locus_tag=C9E95_RS01490;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_000168091.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 57368 58279 . + . ID=gene-C9E95_RS01495;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=C9E95_RS01495;old_locus_tag=C9E95_01520 NZ_PYJW01000027.1 Protein Homology CDS 57368 58279 . + 0 ID=cds-WP_000291332.1;Parent=gene-C9E95_RS01495;Dbxref=GenBank:WP_000291332.1;Name=WP_000291332.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460190.1;locus_tag=C9E95_RS01495;product=N-acetylglucosamine kinase;protein_id=WP_000291332.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 58298 59119 . + . ID=gene-C9E95_RS01500;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=C9E95_RS01500;old_locus_tag=C9E95_01525 NZ_PYJW01000027.1 Protein Homology CDS 58298 59119 . + 0 ID=cds-WP_001191856.1;Parent=gene-C9E95_RS01500;Dbxref=GenBank:WP_001191856.1;Name=WP_001191856.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=C9E95_RS01500;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_001191856.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 59201 60247 . - . ID=gene-C9E95_RS01505;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=C9E95_RS01505;old_locus_tag=C9E95_01530 NZ_PYJW01000027.1 Protein Homology CDS 59201 60247 . - 0 ID=cds-WP_000759329.1;Parent=gene-C9E95_RS01505;Dbxref=GenBank:WP_000759329.1;Name=WP_000759329.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=C9E95_RS01505;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_000759329.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 60272 61051 . - . ID=gene-C9E95_RS01510;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=C9E95_RS01510;old_locus_tag=C9E95_01535 NZ_PYJW01000027.1 Protein Homology CDS 60272 61051 . - 0 ID=cds-WP_000580299.1;Parent=gene-C9E95_RS01510;Dbxref=GenBank:WP_000580299.1;Name=WP_000580299.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460193.1;locus_tag=C9E95_RS01510;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_000580299.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 61367 62377 . - . ID=gene-C9E95_RS01515;Name=sifA;gbkey=Gene;gene=sifA;gene_biotype=protein_coding;locus_tag=C9E95_RS01515;old_locus_tag=C9E95_01540 NZ_PYJW01000027.1 Protein Homology CDS 61367 62377 . - 0 ID=cds-WP_001533329.1;Parent=gene-C9E95_RS01515;Dbxref=GenBank:WP_001533329.1;Name=WP_001533329.1;gbkey=CDS;gene=sifA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460194.1;locus_tag=C9E95_RS01515;product=SPI-2 type III secretion system effector SifA;protein_id=WP_001533329.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 62706 63569 . - . ID=gene-C9E95_RS01520;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=C9E95_RS01520;old_locus_tag=C9E95_01545 NZ_PYJW01000027.1 Protein Homology CDS 62706 63569 . - 0 ID=cds-WP_000799391.1;Parent=gene-C9E95_RS01520;Dbxref=GenBank:WP_000799391.1;Name=WP_000799391.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460195.1;locus_tag=C9E95_RS01520;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_000799391.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 63553 64689 . - . ID=gene-C9E95_RS01525;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=C9E95_RS01525;old_locus_tag=C9E95_01550 NZ_PYJW01000027.1 Protein Homology CDS 63553 64689 . - 0 ID=cds-WP_000531607.1;Parent=gene-C9E95_RS01525;Dbxref=GenBank:WP_000531607.1;Name=WP_000531607.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460196.1;locus_tag=C9E95_RS01525;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_000531607.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 64940 66169 . + . ID=gene-C9E95_RS01530;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=C9E95_RS01530;old_locus_tag=C9E95_01555 NZ_PYJW01000027.1 Protein Homology CDS 64940 66169 . + 0 ID=cds-WP_000359412.1;Parent=gene-C9E95_RS01530;Dbxref=GenBank:WP_000359412.1;Name=WP_000359412.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460197.1;locus_tag=C9E95_RS01530;product=peptidase T;protein_id=WP_000359412.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 66173 67507 . + . ID=gene-C9E95_RS01535;Name=C9E95_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01535;old_locus_tag=C9E95_01560 NZ_PYJW01000027.1 Protein Homology CDS 66173 67507 . + 0 ID=cds-WP_080203919.1;Parent=gene-C9E95_RS01535;Dbxref=GenBank:WP_080203919.1;Name=WP_080203919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460198.1;locus_tag=C9E95_RS01535;product=hypothetical protein;protein_id=WP_080203919.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 67547 68668 . - . ID=gene-C9E95_RS01540;Name=roxA;gbkey=Gene;gene=roxA;gene_biotype=protein_coding;gene_synonym=ycfD;locus_tag=C9E95_RS01540;old_locus_tag=C9E95_01565 NZ_PYJW01000027.1 Protein Homology CDS 67547 68668 . - 0 ID=cds-WP_000456514.1;Parent=gene-C9E95_RS01540;Dbxref=GenBank:WP_000456514.1;Name=WP_000456514.1;gbkey=CDS;gene=roxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460199.1;locus_tag=C9E95_RS01540;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;protein_id=WP_000456514.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 68749 70212 . - . ID=gene-C9E95_RS01545;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=C9E95_RS01545;old_locus_tag=C9E95_01570 NZ_PYJW01000027.1 Protein Homology CDS 68749 70212 . - 0 ID=cds-WP_001031687.1;Parent=gene-C9E95_RS01545;Dbxref=GenBank:WP_001031687.1;Name=WP_001031687.1;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460200.1;locus_tag=C9E95_RS01545;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_001031687.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 70212 70883 . - . ID=gene-C9E95_RS01550;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=C9E95_RS01550;old_locus_tag=C9E95_01575 NZ_PYJW01000027.1 Protein Homology CDS 70212 70883 . - 0 ID=cds-WP_001537766.1;Parent=gene-C9E95_RS01550;Dbxref=GenBank:WP_001537766.1;Name=WP_001537766.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707059.1;locus_tag=C9E95_RS01550;product=two-component system response regulator PhoP;protein_id=WP_001537766.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 71010 72380 . - . ID=gene-C9E95_RS01555;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=C9E95_RS01555;old_locus_tag=C9E95_01580 NZ_PYJW01000027.1 Protein Homology CDS 71010 72380 . - 0 ID=cds-WP_000423766.1;Parent=gene-C9E95_RS01555;Dbxref=GenBank:WP_000423766.1;Name=WP_000423766.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=C9E95_RS01555;product=adenylosuccinate lyase;protein_id=WP_000423766.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 72384 73025 . - . ID=gene-C9E95_RS01560;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=C9E95_RS01560;old_locus_tag=C9E95_01585 NZ_PYJW01000027.1 Protein Homology CDS 72384 73025 . - 0 ID=cds-WP_001519653.1;Parent=gene-C9E95_RS01560;Dbxref=GenBank:WP_001519653.1;Name=WP_001519653.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=C9E95_RS01560;product=high frequency lysogenization protein HflD;protein_id=WP_001519653.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 73112 74218 . - . ID=gene-C9E95_RS01565;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=C9E95_RS01565;old_locus_tag=C9E95_01590 NZ_PYJW01000027.1 Protein Homology CDS 73112 74218 . - 0 ID=cds-WP_000004540.1;Parent=gene-C9E95_RS01565;Dbxref=GenBank:WP_000004540.1;Name=WP_000004540.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309632.2;locus_tag=C9E95_RS01565;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_000004540.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 74272 74733 . - . ID=gene-C9E95_RS01570;Name=C9E95_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01570;old_locus_tag=C9E95_01595 NZ_PYJW01000027.1 Protein Homology CDS 74272 74733 . - 0 ID=cds-WP_000476069.1;Parent=gene-C9E95_RS01570;Dbxref=GenBank:WP_000476069.1;Name=WP_000476069.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460205.1;locus_tag=C9E95_RS01570;product=NUDIX hydrolase;protein_id=WP_000476069.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 74745 75074 . - . ID=gene-C9E95_RS01575;Name=C9E95_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01575;old_locus_tag=C9E95_01600 NZ_PYJW01000027.1 Protein Homology CDS 74745 75074 . - 0 ID=cds-WP_000825956.1;Parent=gene-C9E95_RS01575;Dbxref=GenBank:WP_000825956.1;Name=WP_000825956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460206.1;locus_tag=C9E95_RS01575;product=lysozyme inhibitor LprI family protein;protein_id=WP_000825956.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 75071 75736 . - . ID=gene-C9E95_RS01580;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=C9E95_RS01580;old_locus_tag=C9E95_01605 NZ_PYJW01000027.1 Protein Homology CDS 75071 75736 . - 0 ID=cds-WP_023208616.1;Parent=gene-C9E95_RS01580;Dbxref=GenBank:WP_023208616.1;Name=WP_023208616.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460207.1;locus_tag=C9E95_RS01580;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_023208616.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 75908 77158 . + . ID=gene-C9E95_RS01585;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=C9E95_RS01585;old_locus_tag=C9E95_01610 NZ_PYJW01000027.1 Protein Homology CDS 75908 77158 . + 0 ID=cds-WP_000444508.1;Parent=gene-C9E95_RS01585;Dbxref=GenBank:WP_000444508.1;Name=WP_000444508.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=C9E95_RS01585;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_000444508.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 77606 78730 . + . ID=gene-C9E95_RS01590;Name=sopF;gbkey=Gene;gene=sopF;gene_biotype=protein_coding;locus_tag=C9E95_RS01590;old_locus_tag=C9E95_01615 NZ_PYJW01000027.1 Protein Homology CDS 77606 78730 . + 0 ID=cds-WP_000917269.1;Parent=gene-C9E95_RS01590;Dbxref=GenBank:WP_000917269.1;Name=WP_000917269.1;gbkey=CDS;gene=sopF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460209.1;locus_tag=C9E95_RS01590;product=type III secretion system effector SopF;protein_id=WP_000917269.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 79192 79398 . - . ID=gene-C9E95_RS23640;Name=C9E95_RS23640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS23640;old_locus_tag=C9E95_01625 NZ_PYJW01000027.1 Protein Homology CDS 79192 79398 . - 0 ID=cds-WP_000787625.1;Parent=gene-C9E95_RS23640;Dbxref=GenBank:WP_000787625.1;Name=WP_000787625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000787631.1;locus_tag=C9E95_RS23640;product=hypothetical protein;protein_id=WP_000787625.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 79720 80508 . - . ID=gene-C9E95_RS01600;Name=envF;gbkey=Gene;gene=envF;gene_biotype=protein_coding;locus_tag=C9E95_RS01600;old_locus_tag=C9E95_01635 NZ_PYJW01000027.1 Protein Homology CDS 79720 80508 . - 0 ID=cds-WP_001033399.1;Parent=gene-C9E95_RS01600;Dbxref=GenBank:WP_001033399.1;Name=WP_001033399.1;gbkey=CDS;gene=envF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460210.1;locus_tag=C9E95_RS01600;product=putative envelope lipoprotein EnvF;protein_id=WP_001033399.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 80998 81237 . - . ID=gene-C9E95_RS01605;Name=msgA;gbkey=Gene;gene=msgA;gene_biotype=protein_coding;locus_tag=C9E95_RS01605;old_locus_tag=C9E95_01640 NZ_PYJW01000027.1 Protein Homology CDS 80998 81237 . - 0 ID=cds-WP_000497451.1;Parent=gene-C9E95_RS01605;Dbxref=GenBank:WP_000497451.1;Name=WP_000497451.1;gbkey=CDS;gene=msgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460211.1;locus_tag=C9E95_RS01605;product=virulence protein MsgA;protein_id=WP_000497451.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 81428 81949 . - . ID=gene-C9E95_RS01610;Name=C9E95_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01610;old_locus_tag=C9E95_01645 NZ_PYJW01000027.1 Protein Homology CDS 81428 81949 . - 0 ID=cds-WP_011233071.1;Parent=gene-C9E95_RS01610;Dbxref=GenBank:WP_011233071.1;Name=WP_011233071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460212.1;locus_tag=C9E95_RS01610;product=RICIN domain-containing protein;protein_id=WP_011233071.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 82364 82576 . - . ID=gene-C9E95_RS01615;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=protein_coding;locus_tag=C9E95_RS01615;old_locus_tag=C9E95_01650 NZ_PYJW01000027.1 Protein Homology CDS 82364 82576 . - 0 ID=cds-WP_052909607.1;Parent=gene-C9E95_RS01615;Dbxref=GenBank:WP_052909607.1;Name=WP_052909607.1;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460213.1;locus_tag=C9E95_RS01615;product=cold shock-like protein CspF;protein_id=WP_052909607.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 82708 82971 . - . ID=gene-C9E95_RS01620;Name=pagD;gbkey=Gene;gene=pagD;gene_biotype=protein_coding;locus_tag=C9E95_RS01620;old_locus_tag=C9E95_01655 NZ_PYJW01000027.1 Protein Homology CDS 82708 82971 . - 0 ID=cds-WP_012664625.1;Parent=gene-C9E95_RS01620;Dbxref=GenBank:WP_012664625.1;Name=WP_012664625.1;gbkey=CDS;gene=pagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460214.1;locus_tag=C9E95_RS01620;product=virulence protein PagD;protein_id=WP_012664625.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 83783 84340 . + . ID=gene-C9E95_RS01635;Name=pagC;gbkey=Gene;gene=pagC;gene_biotype=protein_coding;locus_tag=C9E95_RS01635;old_locus_tag=C9E95_01670 NZ_PYJW01000027.1 Protein Homology CDS 83783 84340 . + 0 ID=cds-WP_000789471.1;Parent=gene-C9E95_RS01635;Dbxref=GenBank:WP_000789471.1;Name=WP_000789471.1;gbkey=CDS;gene=pagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460215.1;locus_tag=C9E95_RS01635;product=virulence membrane protein PagC;protein_id=WP_000789471.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 84731 84807 . + . ID=gene-C9E95_RS01640;Name=C9E95_RS01640;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS01640;old_locus_tag=C9E95_01675 NZ_PYJW01000027.1 tRNAscan-SE tRNA 84731 84807 . + . ID=rna-C9E95_RS01640;Parent=gene-C9E95_RS01640;anticodon=(pos:84765..84767);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS01640;product=tRNA-Arg NZ_PYJW01000027.1 tRNAscan-SE exon 84731 84807 . + . ID=exon-C9E95_RS01640-1;Parent=rna-C9E95_RS01640;anticodon=(pos:84765..84767);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS01640;product=tRNA-Arg NZ_PYJW01000027.1 RefSeq gene 85562 85906 . - . ID=gene-C9E95_RS01645;Name=C9E95_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01645;old_locus_tag=C9E95_01680 NZ_PYJW01000027.1 Protein Homology CDS 85562 85906 . - 0 ID=cds-WP_000977725.1;Parent=gene-C9E95_RS01645;Dbxref=GenBank:WP_000977725.1;Name=WP_000977725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460216.1;locus_tag=C9E95_RS01645;product=c-type lysozyme inhibitor;protein_id=WP_000977725.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 86609 86881 . + . ID=gene-C9E95_RS01655;Name=C9E95_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01655;old_locus_tag=C9E95_01690 NZ_PYJW01000027.1 Protein Homology CDS 86609 86881 . + 0 ID=cds-WP_000927827.1;Parent=gene-C9E95_RS01655;Dbxref=GenBank:WP_000927827.1;Name=WP_000927827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460217.1;locus_tag=C9E95_RS01655;product=hypothetical protein;protein_id=WP_000927827.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 87034 87501 . + . ID=gene-C9E95_RS01660;Name=C9E95_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01660;old_locus_tag=C9E95_01695 NZ_PYJW01000027.1 Protein Homology CDS 87034 87501 . + 0 ID=cds-WP_001218120.1;Parent=gene-C9E95_RS01660;Dbxref=GenBank:WP_001218120.1;Name=WP_001218120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460218.1;locus_tag=C9E95_RS01660;product=Hsp20 family protein;protein_id=WP_001218120.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 87840 88883 . + . ID=gene-C9E95_RS01665;Name=C9E95_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01665;old_locus_tag=C9E95_01700 NZ_PYJW01000027.1 Protein Homology CDS 87840 88883 . + 0 ID=cds-WP_000761734.1;Parent=gene-C9E95_RS01665;Dbxref=GenBank:WP_000761734.1;Name=WP_000761734.1;Ontology_term=GO:0005975,GO:0004308,GO:0016997;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA,alpha-sialidase activity|0016997||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460219.1;locus_tag=C9E95_RS01665;product=sialidase family protein;protein_id=WP_000761734.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 88966 89496 . - . ID=gene-C9E95_RS01670;Name=C9E95_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01670;old_locus_tag=C9E95_01705 NZ_PYJW01000027.1 Protein Homology CDS 88966 89496 . - 0 ID=cds-WP_000929974.1;Parent=gene-C9E95_RS01670;Dbxref=GenBank:WP_000929974.1;Name=WP_000929974.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460220.1;locus_tag=C9E95_RS01670;product=cytochrome b;protein_id=WP_000929974.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 89645 89959 . - . ID=gene-C9E95_RS01675;Name=C9E95_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01675;old_locus_tag=C9E95_01710 NZ_PYJW01000027.1 Protein Homology CDS 89645 89959 . - 0 ID=cds-WP_000182478.1;Parent=gene-C9E95_RS01675;Dbxref=GenBank:WP_000182478.1;Name=WP_000182478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460221.1;locus_tag=C9E95_RS01675;product=TRL-like family protein;protein_id=WP_000182478.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 90641 92275 . + . ID=gene-C9E95_RS01680;Name=C9E95_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01680;old_locus_tag=C9E95_01715 NZ_PYJW01000027.1 Protein Homology CDS 90641 92275 . + 0 ID=cds-WP_000946092.1;Parent=gene-C9E95_RS01680;Dbxref=GenBank:WP_000946092.1;Name=WP_000946092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460222.1;locus_tag=C9E95_RS01680;product=ABC transporter substrate-binding protein;protein_id=WP_000946092.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 92275 93249 . + . ID=gene-C9E95_RS01685;Name=C9E95_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01685;old_locus_tag=C9E95_01720 NZ_PYJW01000027.1 Protein Homology CDS 92275 93249 . + 0 ID=cds-WP_080203920.1;Parent=gene-C9E95_RS01685;Dbxref=GenBank:WP_080203920.1;Name=WP_080203920.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460223.1;locus_tag=C9E95_RS01685;product=ABC transporter permease;protein_id=WP_080203920.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 93239 94051 . + . ID=gene-C9E95_RS01690;Name=C9E95_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01690;old_locus_tag=C9E95_01725 NZ_PYJW01000027.1 Protein Homology CDS 93239 94051 . + 0 ID=cds-WP_000966637.1;Parent=gene-C9E95_RS01690;Dbxref=GenBank:WP_000966637.1;Name=WP_000966637.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460224.1;locus_tag=C9E95_RS01690;product=ABC transporter permease;protein_id=WP_000966637.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 94045 94842 . + . ID=gene-C9E95_RS01695;Name=C9E95_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01695;old_locus_tag=C9E95_01730 NZ_PYJW01000027.1 Protein Homology CDS 94045 94842 . + 0 ID=cds-WP_080203921.1;Parent=gene-C9E95_RS01695;Dbxref=GenBank:WP_080203921.1;Name=WP_080203921.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460225.1;locus_tag=C9E95_RS01695;product=ATP-binding cassette domain-containing protein;protein_id=WP_080203921.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 94836 95426 . + . ID=gene-C9E95_RS01700;Name=C9E95_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01700;old_locus_tag=C9E95_01735 NZ_PYJW01000027.1 Protein Homology CDS 94836 95426 . + 0 ID=cds-WP_080203922.1;Parent=gene-C9E95_RS01700;Dbxref=GenBank:WP_080203922.1;Name=WP_080203922.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460226.1;locus_tag=C9E95_RS01700;product=ATP-binding cassette domain-containing protein;protein_id=WP_080203922.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 95508 96641 . - . ID=gene-C9E95_RS01705;Name=C9E95_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01705;old_locus_tag=C9E95_01740 NZ_PYJW01000027.1 Protein Homology CDS 95508 96641 . - 0 ID=cds-WP_000456065.1;Parent=gene-C9E95_RS01705;Dbxref=GenBank:WP_000456065.1;Name=WP_000456065.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460227.1;locus_tag=C9E95_RS01705;product=mechanosensitive ion channel family protein;protein_id=WP_000456065.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 96835 97161 . + . ID=gene-C9E95_RS01710;Name=C9E95_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01710;old_locus_tag=C9E95_01745 NZ_PYJW01000027.1 Protein Homology CDS 96835 97161 . + 0 ID=cds-WP_001183699.1;Parent=gene-C9E95_RS01710;Dbxref=GenBank:WP_001183699.1;Name=WP_001183699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460228.1;locus_tag=C9E95_RS01710;product=four-helix bundle copper-binding protein;protein_id=WP_001183699.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 97170 97246 . + . ID=gene-C9E95_RS01715;Name=C9E95_RS01715;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS01715;old_locus_tag=C9E95_01750 NZ_PYJW01000027.1 tRNAscan-SE tRNA 97170 97246 . + . ID=rna-C9E95_RS01715;Parent=gene-C9E95_RS01715;anticodon=(pos:97204..97206);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS01715;product=tRNA-Arg NZ_PYJW01000027.1 tRNAscan-SE exon 97170 97246 . + . ID=exon-C9E95_RS01715-1;Parent=rna-C9E95_RS01715;anticodon=(pos:97204..97206);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS01715;product=tRNA-Arg NZ_PYJW01000027.1 RefSeq gene 97358 98005 . + . ID=gene-C9E95_RS01720;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=C9E95_RS01720;old_locus_tag=C9E95_01755 NZ_PYJW01000027.1 Protein Homology CDS 97358 98005 . + 0 ID=cds-WP_001537483.1;Parent=gene-C9E95_RS01720;Dbxref=GenBank:WP_001537483.1;Name=WP_001537483.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460229.3;locus_tag=C9E95_RS01720;product=metal-binding protein ZinT;protein_id=WP_001537483.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 98114 98902 . + . ID=gene-C9E95_RS01725;Name=aadA;gbkey=Gene;gene=aadA;gene_biotype=protein_coding;locus_tag=C9E95_RS01725;old_locus_tag=C9E95_01760 NZ_PYJW01000027.1 Protein Homology CDS 98114 98902 . + 0 ID=cds-WP_080203923.1;Parent=gene-C9E95_RS01725;Dbxref=GenBank:WP_080203923.1;Name=WP_080203923.1;gbkey=CDS;gene=aadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460230.1;locus_tag=C9E95_RS01725;product=cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9);protein_id=WP_080203923.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 99047 99640 . + . ID=gene-C9E95_RS01730;Name=C9E95_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01730;old_locus_tag=C9E95_01765 NZ_PYJW01000027.1 Protein Homology CDS 99047 99640 . + 0 ID=cds-WP_001562706.1;Parent=gene-C9E95_RS01730;Dbxref=GenBank:WP_001562706.1;Name=WP_001562706.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460231.1;locus_tag=C9E95_RS01730;product=helix-turn-helix domain-containing protein;protein_id=WP_001562706.1;transl_table=11 NZ_PYJW01000027.1 RefSeq gene 99709 100557 . + . ID=gene-C9E95_RS01735;Name=C9E95_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS01735;old_locus_tag=C9E95_01770 NZ_PYJW01000027.1 Protein Homology CDS 99709 100557 . + 0 ID=cds-WP_000190260.1;Parent=gene-C9E95_RS01735;Dbxref=GenBank:WP_000190260.1;Name=WP_000190260.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460232.1;locus_tag=C9E95_RS01735;product=MerR family transcriptional regulator;protein_id=WP_000190260.1;transl_table=11 ##sequence-region NZ_PYJW01000090.1 1 16722 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000090.1 RefSeq region 1 16722 . + . ID=NZ_PYJW01000090.1:1..16722;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000090.1 RefSeq gene 1 1248 . - . ID=gene-C9E95_RS09875;Name=C9E95_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09875;old_locus_tag=C9E95_10130;partial=true;start_range=.,1 NZ_PYJW01000090.1 Protein Homology CDS 1 1248 . - 0 ID=cds-WP_135369837.1;Parent=gene-C9E95_RS09875;Dbxref=GenBank:WP_135369837.1;Name=WP_135369837.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462732.1;locus_tag=C9E95_RS09875;partial=true;product=MFS transporter;protein_id=WP_135369837.1;start_range=.,1;transl_table=11 NZ_PYJW01000090.1 RefSeq gene 1553 2365 . + . ID=gene-C9E95_RS09880;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=C9E95_RS09880;old_locus_tag=C9E95_10135 NZ_PYJW01000090.1 Protein Homology CDS 1553 2365 . + 0 ID=cds-WP_000985571.1;Parent=gene-C9E95_RS09880;Dbxref=GenBank:WP_000985571.1;Name=WP_000985571.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418152.1;locus_tag=C9E95_RS09880;product=sugar-phosphatase;protein_id=WP_000985571.1;transl_table=11 NZ_PYJW01000090.1 RefSeq gene 2567 3589 . + . ID=gene-C9E95_RS09885;Name=C9E95_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09885;old_locus_tag=C9E95_10140 NZ_PYJW01000090.1 Protein Homology CDS 2567 3589 . + 0 ID=cds-WP_000747398.1;Parent=gene-C9E95_RS09885;Dbxref=GenBank:WP_000747398.1;Name=WP_000747398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528257.1;locus_tag=C9E95_RS09885;product=hypothetical protein;protein_id=WP_000747398.1;transl_table=11 NZ_PYJW01000090.1 RefSeq gene 3586 4725 . + . ID=gene-C9E95_RS09890;Name=C9E95_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09890;old_locus_tag=C9E95_10145 NZ_PYJW01000090.1 Protein Homology CDS 3586 4725 . + 0 ID=cds-WP_023993773.1;Parent=gene-C9E95_RS09890;Dbxref=GenBank:WP_023993773.1;Name=WP_023993773.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528293.1;locus_tag=C9E95_RS09890;product=BamA/TamA family outer membrane protein;protein_id=WP_023993773.1;transl_table=11 NZ_PYJW01000090.1 RefSeq gene 4722 5849 . + . ID=gene-C9E95_RS09895;Name=C9E95_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09895;old_locus_tag=C9E95_10150 NZ_PYJW01000090.1 Protein Homology CDS 4722 5849 . + 0 ID=cds-WP_023993774.1;Parent=gene-C9E95_RS09895;Dbxref=GenBank:WP_023993774.1;Name=WP_023993774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762570.1;locus_tag=C9E95_RS09895;product=DUF4056 domain-containing protein;protein_id=WP_023993774.1;transl_table=11 NZ_PYJW01000090.1 RefSeq gene 5954 8689 . - . ID=gene-C9E95_RS09900;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=C9E95_RS09900;old_locus_tag=C9E95_10155 NZ_PYJW01000090.1 Protein Homology CDS 5954 8689 . - 0 ID=cds-WP_061383907.1;Parent=gene-C9E95_RS09900;Dbxref=GenBank:WP_061383907.1;Name=WP_061383907.1;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=C9E95_RS09900;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=WP_061383907.1;transl_table=11 NZ_PYJW01000090.1 RefSeq gene 8769 9809 . + . ID=gene-C9E95_RS09905;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=C9E95_RS09905;old_locus_tag=C9E95_10160 NZ_PYJW01000090.1 Protein Homology CDS 8769 9809 . + 0 ID=cds-WP_080203976.1;Parent=gene-C9E95_RS09905;Dbxref=GenBank:WP_080203976.1;Name=WP_080203976.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462725.1;locus_tag=C9E95_RS09905;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_080203976.1;transl_table=11 NZ_PYJW01000090.1 RefSeq gene 9782 10474 . - . ID=gene-C9E95_RS09910;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=C9E95_RS09910;old_locus_tag=C9E95_10165 NZ_PYJW01000090.1 Protein Homology CDS 9782 10474 . - 0 ID=cds-WP_001747553.1;Parent=gene-C9E95_RS09910;Dbxref=GenBank:WP_001747553.1;Name=WP_001747553.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462724.1;locus_tag=C9E95_RS09910;product=two-component system response regulator TorR;protein_id=WP_001747553.1;transl_table=11 NZ_PYJW01000090.1 RefSeq gene 10604 11788 . + . ID=gene-C9E95_RS09915;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=C9E95_RS09915;old_locus_tag=C9E95_10170 NZ_PYJW01000090.1 Protein Homology CDS 10604 11788 . + 0 ID=cds-WP_001230254.1;Parent=gene-C9E95_RS09915;Dbxref=GenBank:WP_001230254.1;Name=WP_001230254.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462723.1;locus_tag=C9E95_RS09915;product=pentaheme c-type cytochrome TorC;protein_id=WP_001230254.1;transl_table=11 NZ_PYJW01000090.1 RefSeq gene 11778 14330 . + . ID=gene-C9E95_RS09920;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=C9E95_RS09920;old_locus_tag=C9E95_10175 NZ_PYJW01000090.1 Protein Homology CDS 11778 14330 . + 0 ID=cds-WP_080203975.1;Parent=gene-C9E95_RS09920;Dbxref=GenBank:WP_080203975.1;Name=WP_080203975.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462722.1;locus_tag=C9E95_RS09920;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_080203975.1;transl_table=11 NZ_PYJW01000090.1 RefSeq gene 14323 14955 . + . ID=gene-C9E95_RS09925;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=C9E95_RS09925;old_locus_tag=C9E95_10180 NZ_PYJW01000090.1 Protein Homology CDS 14323 14955 . + 0 ID=cds-WP_001041512.1;Parent=gene-C9E95_RS09925;Dbxref=GenBank:WP_001041512.1;Name=WP_001041512.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462721.1;locus_tag=C9E95_RS09925;product=molecular chaperone TorD;protein_id=WP_001041512.1;transl_table=11 NZ_PYJW01000090.1 RefSeq gene 15145 16545 . + . ID=gene-C9E95_RS09930;Name=C9E95_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09930;old_locus_tag=C9E95_10185 NZ_PYJW01000090.1 Protein Homology CDS 15145 16545 . + 0 ID=cds-WP_000724469.1;Parent=gene-C9E95_RS09930;Dbxref=GenBank:WP_000724469.1;Name=WP_000724469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462720.1;locus_tag=C9E95_RS09930;product=cytochrome-c peroxidase;protein_id=WP_000724469.1;transl_table=11 NZ_PYJW01000090.1 RefSeq gene 16551 16722 . + . ID=gene-C9E95_RS09935;Name=C9E95_RS09935;end_range=16722,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS09935;old_locus_tag=C9E95_10190;partial=true NZ_PYJW01000090.1 Protein Homology CDS 16551 16722 . + 0 ID=cds-WP_135369838.1;Parent=gene-C9E95_RS09935;Dbxref=GenBank:WP_135369838.1;Name=WP_135369838.1;Ontology_term=GO:0005524;end_range=16722,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461197.1;locus_tag=C9E95_RS09935;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_135369838.1;transl_table=11 ##sequence-region NZ_PYJW01000066.1 1 16105 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000066.1 RefSeq region 1 16105 . + . ID=NZ_PYJW01000066.1:1..16105;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000066.1 RefSeq gene 300 2369 . - . ID=gene-C9E95_RS06540;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=C9E95_RS06540;old_locus_tag=C9E95_06695 NZ_PYJW01000066.1 Protein Homology CDS 300 2369 . - 0 ID=cds-WP_001291735.1;Parent=gene-C9E95_RS06540;Dbxref=GenBank:WP_001291735.1;Name=WP_001291735.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=C9E95_RS06540;product=glycine--tRNA ligase subunit beta;protein_id=WP_001291735.1;transl_table=11 NZ_PYJW01000066.1 RefSeq gene 2379 3290 . - . ID=gene-C9E95_RS06545;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=C9E95_RS06545;old_locus_tag=C9E95_06700 NZ_PYJW01000066.1 Protein Homology CDS 2379 3290 . - 0 ID=cds-WP_001168551.1;Parent=gene-C9E95_RS06545;Dbxref=GenBank:WP_001168551.1;Name=WP_001168551.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462556.1;locus_tag=C9E95_RS06545;product=glycine--tRNA ligase subunit alpha;protein_id=WP_001168551.1;transl_table=11 NZ_PYJW01000066.1 RefSeq gene 3429 3731 . - . ID=gene-C9E95_RS06550;Name=C9E95_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06550;old_locus_tag=C9E95_06705 NZ_PYJW01000066.1 Protein Homology CDS 3429 3731 . - 0 ID=cds-WP_000605592.1;Parent=gene-C9E95_RS06550;Dbxref=GenBank:WP_000605592.1;Name=WP_000605592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462557.1;locus_tag=C9E95_RS06550;product=YsaB family lipoprotein;protein_id=WP_000605592.1;transl_table=11 NZ_PYJW01000066.1 RefSeq gene 3897 4892 . + . ID=gene-C9E95_RS06560;Name=C9E95_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06560;old_locus_tag=C9E95_06715 NZ_PYJW01000066.1 Protein Homology CDS 3897 4892 . + 0 ID=cds-WP_080203784.1;Parent=gene-C9E95_RS06560;Dbxref=GenBank:WP_080203784.1;Name=WP_080203784.1;Ontology_term=GO:0016413,GO:0016747;gbkey=CDS;go_function=O-acetyltransferase activity|0016413||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462558.1;locus_tag=C9E95_RS06560;product=acyltransferase;protein_id=WP_080203784.1;transl_table=11 NZ_PYJW01000066.1 RefSeq gene 4915 5268 . - . ID=gene-C9E95_RS06565;Name=C9E95_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06565;old_locus_tag=C9E95_06720 NZ_PYJW01000066.1 Protein Homology CDS 4915 5268 . - 0 ID=cds-WP_000340935.1;Parent=gene-C9E95_RS06565;Dbxref=GenBank:WP_000340935.1;Name=WP_000340935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462559.1;locus_tag=C9E95_RS06565;product=YiaA/YiaB family protein;protein_id=WP_000340935.1;transl_table=11 NZ_PYJW01000066.1 RefSeq gene 5443 6897 . - . ID=gene-C9E95_RS06570;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=C9E95_RS06570;old_locus_tag=C9E95_06725 NZ_PYJW01000066.1 Protein Homology CDS 5443 6897 . - 0 ID=cds-WP_080203785.1;Parent=gene-C9E95_RS06570;Dbxref=GenBank:WP_080203785.1;Name=WP_080203785.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462560.1;locus_tag=C9E95_RS06570;product=xylulokinase;protein_id=WP_080203785.1;transl_table=11 NZ_PYJW01000066.1 RefSeq gene 6997 8319 . - . ID=gene-C9E95_RS06575;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=C9E95_RS06575;old_locus_tag=C9E95_06730 NZ_PYJW01000066.1 Protein Homology CDS 6997 8319 . - 0 ID=cds-WP_058144851.1;Parent=gene-C9E95_RS06575;Dbxref=GenBank:WP_058144851.1;Name=WP_058144851.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462561.1;locus_tag=C9E95_RS06575;product=xylose isomerase;protein_id=WP_058144851.1;transl_table=11 NZ_PYJW01000066.1 RefSeq gene 8682 9860 . + . ID=gene-C9E95_RS06585;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=C9E95_RS06585;old_locus_tag=C9E95_06740 NZ_PYJW01000066.1 Protein Homology CDS 8682 9860 . + 0 ID=cds-WP_000459824.1;Parent=gene-C9E95_RS06585;Dbxref=GenBank:WP_000459824.1;Name=WP_000459824.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462562.1;locus_tag=C9E95_RS06585;product=D-xylose utilization transcriptional activator XylR;protein_id=WP_000459824.1;transl_table=11 NZ_PYJW01000066.1 RefSeq gene 9921 10745 . - . ID=gene-C9E95_RS06590;Name=C9E95_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06590;old_locus_tag=C9E95_06745 NZ_PYJW01000066.1 Protein Homology CDS 9921 10745 . - 0 ID=cds-WP_001575119.1;Parent=gene-C9E95_RS06590;Dbxref=GenBank:WP_001575119.1;Name=WP_001575119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462563.1;locus_tag=C9E95_RS06590;product=protein bax;protein_id=WP_001575119.1;transl_table=11 NZ_PYJW01000066.1 RefSeq gene 11061 13088 . + . ID=gene-C9E95_RS06595;Name=C9E95_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06595;old_locus_tag=C9E95_06750 NZ_PYJW01000066.1 Protein Homology CDS 11061 13088 . + 0 ID=cds-WP_080203786.1;Parent=gene-C9E95_RS06595;Dbxref=GenBank:WP_080203786.1;Name=WP_080203786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462564.1;locus_tag=C9E95_RS06595;product=alpha-amylase;protein_id=WP_080203786.1;transl_table=11 NZ_PYJW01000066.1 RefSeq gene 13262 14512 . + . ID=gene-C9E95_RS06600;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=C9E95_RS06600;old_locus_tag=C9E95_06755 NZ_PYJW01000066.1 Protein Homology CDS 13262 14512 . + 0 ID=cds-WP_080203787.1;Parent=gene-C9E95_RS06600;Dbxref=GenBank:WP_080203787.1;Name=WP_080203787.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462565.1;locus_tag=C9E95_RS06600;product=valine--pyruvate transaminase;protein_id=WP_080203787.1;transl_table=11 NZ_PYJW01000066.1 RefSeq gene 14549 15022 . - . ID=gene-C9E95_RS06605;Name=C9E95_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS06605;old_locus_tag=C9E95_06760 NZ_PYJW01000066.1 Protein Homology CDS 14549 15022 . - 0 ID=cds-WP_080203788.1;Parent=gene-C9E95_RS06605;Dbxref=GenBank:WP_080203788.1;Name=WP_080203788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462566.1;locus_tag=C9E95_RS06605;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_080203788.1;transl_table=11 NZ_PYJW01000066.1 RefSeq gene 15139 15939 . - . ID=gene-C9E95_RS06610;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=C9E95_RS06610;old_locus_tag=C9E95_06765 NZ_PYJW01000066.1 Protein Homology CDS 15139 15939 . - 0 ID=cds-WP_000081338.1;Parent=gene-C9E95_RS06610;Dbxref=GenBank:WP_000081338.1;Name=WP_000081338.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462567.1;locus_tag=C9E95_RS06610;product=IclR family transcriptional regulator YiaJ;protein_id=WP_000081338.1;transl_table=11 ##sequence-region NZ_PYJW01000013.1 1 15270 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000013.1 RefSeq region 1 15270 . + . ID=NZ_PYJW01000013.1:1..15270;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000013.1 RefSeq gene 437 1057 . + . ID=gene-C9E95_RS00740;Name=C9E95_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS00740;old_locus_tag=C9E95_00750 NZ_PYJW01000013.1 Protein Homology CDS 437 1057 . + 0 ID=cds-WP_080203761.1;Parent=gene-C9E95_RS00740;Dbxref=GenBank:WP_080203761.1;Name=WP_080203761.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=C9E95_RS00740;product=YdcF family protein;protein_id=WP_080203761.1;transl_table=11 NZ_PYJW01000013.1 RefSeq gene 1101 3452 . + . ID=gene-C9E95_RS00745;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=C9E95_RS00745;old_locus_tag=C9E95_00755 NZ_PYJW01000013.1 Protein Homology CDS 1101 3452 . + 0 ID=cds-WP_000035716.1;Parent=gene-C9E95_RS00745;Dbxref=GenBank:WP_000035716.1;Name=WP_000035716.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=C9E95_RS00745;product=DNA polymerase II;protein_id=WP_000035716.1;transl_table=11 NZ_PYJW01000013.1 RefSeq gene 3626 6532 . + . ID=gene-C9E95_RS00750;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=C9E95_RS00750;old_locus_tag=C9E95_00765 NZ_PYJW01000013.1 Protein Homology CDS 3626 6532 . + 0 ID=cds-WP_001116966.1;Parent=gene-C9E95_RS00750;Dbxref=GenBank:WP_001116966.1;Name=WP_001116966.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=C9E95_RS00750;product=RNA polymerase-associated protein RapA;protein_id=WP_001116966.1;transl_table=11 NZ_PYJW01000013.1 RefSeq gene 6544 7203 . + . ID=gene-C9E95_RS00755;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=C9E95_RS00755;old_locus_tag=C9E95_00770 NZ_PYJW01000013.1 Protein Homology CDS 6544 7203 . + 0 ID=cds-WP_000525198.1;Parent=gene-C9E95_RS00755;Dbxref=GenBank:WP_000525198.1;Name=WP_000525198.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459100.1;locus_tag=C9E95_RS00755;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_000525198.1;transl_table=11 NZ_PYJW01000013.1 RefSeq gene 7298 8110 . - . ID=gene-C9E95_RS00760;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=C9E95_RS00760;old_locus_tag=C9E95_00775 NZ_PYJW01000013.1 Protein Homology CDS 7298 8110 . - 0 ID=cds-WP_001200595.1;Parent=gene-C9E95_RS00760;Dbxref=GenBank:WP_001200595.1;Name=WP_001200595.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459099.1;locus_tag=C9E95_RS00760;product=co-chaperone DjlA;protein_id=WP_001200595.1;transl_table=11 NZ_PYJW01000013.1 RefSeq gene 8364 10724 . + . ID=gene-C9E95_RS00765;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=C9E95_RS00765;old_locus_tag=C9E95_00780 NZ_PYJW01000013.1 Protein Homology CDS 8364 10724 . + 0 ID=cds-WP_000746116.1;Parent=gene-C9E95_RS00765;Dbxref=GenBank:WP_000746116.1;Name=WP_000746116.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459098.1;locus_tag=C9E95_RS00765;product=LPS assembly protein LptD;protein_id=WP_000746116.1;transl_table=11 NZ_PYJW01000013.1 RefSeq gene 10778 12064 . + . ID=gene-C9E95_RS00770;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=C9E95_RS00770;old_locus_tag=C9E95_00785 NZ_PYJW01000013.1 Protein Homology CDS 10778 12064 . + 0 ID=cds-WP_000800482.1;Parent=gene-C9E95_RS00770;Dbxref=GenBank:WP_000800482.1;Name=WP_000800482.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459097.1;locus_tag=C9E95_RS00770;product=peptidylprolyl isomerase SurA;protein_id=WP_000800482.1;transl_table=11 NZ_PYJW01000013.1 RefSeq gene 12064 13053 . + . ID=gene-C9E95_RS00775;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=C9E95_RS00775;old_locus_tag=C9E95_00790 NZ_PYJW01000013.1 Protein Homology CDS 12064 13053 . + 0 ID=cds-WP_135369795.1;Parent=gene-C9E95_RS00775;Dbxref=GenBank:WP_135369795.1;Name=WP_135369795.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459096.1;locus_tag=C9E95_RS00775;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_135369795.1;transl_table=11 NZ_PYJW01000013.1 RefSeq gene 13050 13871 . + . ID=gene-C9E95_RS00780;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=C9E95_RS00780;old_locus_tag=C9E95_00795 NZ_PYJW01000013.1 Protein Homology CDS 13050 13871 . + 0 ID=cds-WP_001065397.1;Parent=gene-C9E95_RS00780;Dbxref=GenBank:WP_001065397.1;Name=WP_001065397.1;Ontology_term=GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459095.1;locus_tag=C9E95_RS00780;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001065397.1;transl_table=11 NZ_PYJW01000013.1 RefSeq gene 13874 14251 . + . ID=gene-C9E95_RS00785;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=C9E95_RS00785;old_locus_tag=C9E95_00800 NZ_PYJW01000013.1 Protein Homology CDS 13874 14251 . + 0 ID=cds-WP_000610894.1;Parent=gene-C9E95_RS00785;Dbxref=GenBank:WP_000610894.1;Name=WP_000610894.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459094.1;locus_tag=C9E95_RS00785;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_000610894.1;transl_table=11 NZ_PYJW01000013.1 RefSeq gene 14262 15110 . + . ID=gene-C9E95_RS00790;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=C9E95_RS00790;old_locus_tag=C9E95_00805 NZ_PYJW01000013.1 Protein Homology CDS 14262 15110 . + 0 ID=cds-WP_000257211.1;Parent=gene-C9E95_RS00790;Dbxref=GenBank:WP_000257211.1;Name=WP_000257211.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459093.1;locus_tag=C9E95_RS00790;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_000257211.1;transl_table=11 ##sequence-region NZ_PYJW01000180.1 1 14807 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000180.1 RefSeq region 1 14807 . + . ID=NZ_PYJW01000180.1:1..14807;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000180.1 RefSeq gene 57 953 . - . ID=gene-C9E95_RS21165;Name=C9E95_RS21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21165;old_locus_tag=C9E95_21670 NZ_PYJW01000180.1 Protein Homology CDS 57 953 . - 0 ID=cds-WP_080204040.1;Parent=gene-C9E95_RS21165;Dbxref=GenBank:WP_080204040.1;Name=WP_080204040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461708.1;locus_tag=C9E95_RS21165;product=antimicrobial resistance protein Mig-14;protein_id=WP_080204040.1;transl_table=11 NZ_PYJW01000180.1 RefSeq gene 1247 2176 . - . ID=gene-C9E95_RS21175;Name=C9E95_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21175;old_locus_tag=C9E95_21680 NZ_PYJW01000180.1 Protein Homology CDS 1247 2176 . - 0 ID=cds-WP_000178742.1;Parent=gene-C9E95_RS21175;Dbxref=GenBank:WP_000178742.1;Name=WP_000178742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461707.1;locus_tag=C9E95_RS21175;product=VirK family antimicrobial peptide resistance protein;protein_id=WP_000178742.1;transl_table=11 NZ_PYJW01000180.1 RefSeq gene 2694 3746 . + . ID=gene-C9E95_RS21180;Name=pipB2;gbkey=Gene;gene=pipB2;gene_biotype=protein_coding;locus_tag=C9E95_RS21180;old_locus_tag=C9E95_21685 NZ_PYJW01000180.1 Protein Homology CDS 2694 3746 . + 0 ID=cds-WP_080204047.1;Parent=gene-C9E95_RS21180;Dbxref=GenBank:WP_080204047.1;Name=WP_080204047.1;gbkey=CDS;gene=pipB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461706.1;locus_tag=C9E95_RS21180;product=SPI-2 type III secretion system effector PipB2;protein_id=WP_080204047.1;transl_table=11 NZ_PYJW01000180.1 RefSeq gene 4790 6964 . + . ID=gene-C9E95_RS21190;Name=C9E95_RS21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21190;old_locus_tag=C9E95_21695 NZ_PYJW01000180.1 Protein Homology CDS 4790 6964 . + 0 ID=cds-WP_001747679.1;Parent=gene-C9E95_RS21190;Dbxref=GenBank:WP_001747679.1;Name=WP_001747679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542215.1;locus_tag=C9E95_RS21190;product=TonB-dependent siderophore receptor;protein_id=WP_001747679.1;transl_table=11 NZ_PYJW01000180.1 RefSeq gene 7006 7941 . - . ID=gene-C9E95_RS21195;Name=C9E95_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21195;old_locus_tag=C9E95_21700 NZ_PYJW01000180.1 Protein Homology CDS 7006 7941 . - 0 ID=cds-WP_080204042.1;Parent=gene-C9E95_RS21195;Dbxref=GenBank:WP_080204042.1;Name=WP_080204042.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461703.1;locus_tag=C9E95_RS21195;product=alpha/beta hydrolase;protein_id=WP_080204042.1;transl_table=11 NZ_PYJW01000180.1 RefSeq gene 7973 9217 . - . ID=gene-C9E95_RS21200;Name=C9E95_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS21200;old_locus_tag=C9E95_21705 NZ_PYJW01000180.1 Protein Homology CDS 7973 9217 . - 0 ID=cds-WP_080204043.1;Parent=gene-C9E95_RS21200;Dbxref=GenBank:WP_080204043.1;Name=WP_080204043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461702.1;locus_tag=C9E95_RS21200;product=esterase family protein;protein_id=WP_080204043.1;transl_table=11 NZ_PYJW01000180.1 RefSeq gene 9327 12983 . - . ID=gene-C9E95_RS21205;Name=iroC;gbkey=Gene;gene=iroC;gene_biotype=protein_coding;locus_tag=C9E95_RS21205;old_locus_tag=C9E95_21710 NZ_PYJW01000180.1 Protein Homology CDS 9327 12983 . - 0 ID=cds-WP_080204044.1;Parent=gene-C9E95_RS21205;Dbxref=GenBank:WP_080204044.1;Name=WP_080204044.1;gbkey=CDS;gene=iroC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461701.1;locus_tag=C9E95_RS21205;product=salmochelin/enterobactin export ABC transporter IroC;protein_id=WP_080204044.1;transl_table=11 NZ_PYJW01000180.1 RefSeq gene 13064 14179 . - . ID=gene-C9E95_RS21210;Name=iroB;gbkey=Gene;gene=iroB;gene_biotype=protein_coding;locus_tag=C9E95_RS21210;old_locus_tag=C9E95_21715 NZ_PYJW01000180.1 Protein Homology CDS 13064 14179 . - 0 ID=cds-WP_023216370.1;Parent=gene-C9E95_RS21210;Dbxref=GenBank:WP_023216370.1;Name=WP_023216370.1;gbkey=CDS;gene=iroB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461700.1;locus_tag=C9E95_RS21210;product=salmochelin biosynthesis C-glycosyltransferase IroB;protein_id=WP_023216370.1;transl_table=11 ##sequence-region NZ_PYJW01000191.1 1 14122 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000191.1 RefSeq region 1 14122 . + . ID=NZ_PYJW01000191.1:1..14122;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000191.1 RefSeq gene 479 2110 . - . ID=gene-C9E95_RS22400;Name=C9E95_RS22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22400;old_locus_tag=C9E95_22970 NZ_PYJW01000191.1 Protein Homology CDS 479 2110 . - 0 ID=cds-WP_023994342.1;Parent=gene-C9E95_RS22400;Dbxref=GenBank:WP_023994342.1;Name=WP_023994342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=C9E95_RS22400;product=class I SAM-dependent methyltransferase;protein_id=WP_023994342.1;transl_table=11 NZ_PYJW01000191.1 RefSeq gene 2115 2372 . - . ID=gene-C9E95_RS22405;Name=C9E95_RS22405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22405;old_locus_tag=C9E95_22975 NZ_PYJW01000191.1 Protein Homology CDS 2115 2372 . - 0 ID=cds-WP_001054380.1;Parent=gene-C9E95_RS22405;Dbxref=GenBank:WP_001054380.1;Name=WP_001054380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463360.1;locus_tag=C9E95_RS22405;product=YjhX family toxin;protein_id=WP_001054380.1;transl_table=11 NZ_PYJW01000191.1 RefSeq gene 2860 3468 . + . ID=gene-C9E95_RS22415;Name=C9E95_RS22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22415;old_locus_tag=C9E95_22990 NZ_PYJW01000191.1 Protein Homology CDS 2860 3468 . + 0 ID=cds-WP_023993203.1;Parent=gene-C9E95_RS22415;Dbxref=GenBank:WP_023993203.1;Name=WP_023993203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463361.1;locus_tag=C9E95_RS22415;product=DUF1062 domain-containing protein;protein_id=WP_023993203.1;transl_table=11 NZ_PYJW01000191.1 RefSeq gene 3822 4733 . + . ID=gene-C9E95_RS22420;Name=C9E95_RS22420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22420;old_locus_tag=C9E95_22995 NZ_PYJW01000191.1 Protein Homology CDS 3822 4733 . + 0 ID=cds-WP_000556768.1;Parent=gene-C9E95_RS22420;Dbxref=GenBank:WP_000556768.1;Name=WP_000556768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463363.1;locus_tag=C9E95_RS22420;product=STM4504/CBY_0614 family protein;protein_id=WP_000556768.1;transl_table=11 NZ_PYJW01000191.1 RefSeq gene 4938 5399 . + . ID=gene-C9E95_RS22425;Name=C9E95_RS22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22425;old_locus_tag=C9E95_23000 NZ_PYJW01000191.1 Protein Homology CDS 4938 5399 . + 0 ID=cds-WP_001654330.1;Parent=gene-C9E95_RS22425;Dbxref=GenBank:WP_001654330.1;Name=WP_001654330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463364.1;locus_tag=C9E95_RS22425;product=DUF302 domain-containing protein;protein_id=WP_001654330.1;transl_table=11 NZ_PYJW01000191.1 RefSeq gene 5396 6070 . - . ID=gene-C9E95_RS22430;Name=C9E95_RS22430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22430;old_locus_tag=C9E95_23005 NZ_PYJW01000191.1 Protein Homology CDS 5396 6070 . - 0 ID=cds-WP_023993202.1;Parent=gene-C9E95_RS22430;Dbxref=GenBank:WP_023993202.1;Name=WP_023993202.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463365.1;locus_tag=C9E95_RS22430;product=dienelactone hydrolase family protein;protein_id=WP_023993202.1;transl_table=11 NZ_PYJW01000191.1 RefSeq gene 6420 7193 . + . ID=gene-C9E95_RS22435;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=C9E95_RS22435;old_locus_tag=C9E95_23015 NZ_PYJW01000191.1 Protein Homology CDS 6420 7193 . + 0 ID=cds-WP_000841652.1;Parent=gene-C9E95_RS22435;Dbxref=GenBank:WP_000841652.1;Name=WP_000841652.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463366.1;locus_tag=C9E95_RS22435;product=Uxu operon transcriptional regulator;protein_id=WP_000841652.1;transl_table=11 NZ_PYJW01000191.1 RefSeq gene 7194 8207 . - . ID=gene-C9E95_RS22440;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=C9E95_RS22440;old_locus_tag=C9E95_23020 NZ_PYJW01000191.1 Protein Homology CDS 7194 8207 . - 0 ID=cds-WP_001094611.1;Parent=gene-C9E95_RS22440;Dbxref=GenBank:WP_001094611.1;Name=WP_001094611.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463367.1;locus_tag=C9E95_RS22440;product=tryptophan--tRNA ligase;protein_id=WP_001094611.1;transl_table=11 NZ_PYJW01000191.1 RefSeq gene 8924 9454 . + . ID=gene-C9E95_RS22445;Name=C9E95_RS22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22445;old_locus_tag=C9E95_23025 NZ_PYJW01000191.1 Protein Homology CDS 8924 9454 . + 0 ID=cds-WP_000907671.1;Parent=gene-C9E95_RS22445;Dbxref=GenBank:WP_000907671.1;Name=WP_000907671.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463368.3;locus_tag=C9E95_RS22445;product=Hcp family type VI secretion system effector;protein_id=WP_000907671.1;transl_table=11 NZ_PYJW01000191.1 RefSeq gene 9693 10427 . + . ID=gene-C9E95_RS22450;Name=C9E95_RS22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22450;old_locus_tag=C9E95_23035 NZ_PYJW01000191.1 Protein Homology CDS 9693 10427 . + 0 ID=cds-WP_000683247.1;Parent=gene-C9E95_RS22450;Dbxref=GenBank:WP_000683247.1;Name=WP_000683247.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463369.1;locus_tag=C9E95_RS22450;product=aspartate/glutamate racemase family protein;protein_id=WP_000683247.1;transl_table=11 NZ_PYJW01000191.1 RefSeq gene 10433 11341 . - . ID=gene-C9E95_RS22455;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=C9E95_RS22455;old_locus_tag=C9E95_23040 NZ_PYJW01000191.1 Protein Homology CDS 10433 11341 . - 0 ID=cds-WP_080203718.1;Parent=gene-C9E95_RS22455;Dbxref=GenBank:WP_080203718.1;Name=WP_080203718.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463370.1;locus_tag=C9E95_RS22455;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_080203718.1;transl_table=11 NZ_PYJW01000191.1 RefSeq gene 11460 12632 . - . ID=gene-C9E95_RS22460;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=C9E95_RS22460;old_locus_tag=C9E95_23045 NZ_PYJW01000191.1 Protein Homology CDS 11460 12632 . - 0 ID=cds-WP_001821328.1;Parent=gene-C9E95_RS22460;Dbxref=GenBank:WP_001821328.1;Name=WP_001821328.1;Ontology_term=GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463371.1;locus_tag=C9E95_RS22460;product=beta-aspartyl-peptidase;protein_id=WP_001821328.1;transl_table=11 NZ_PYJW01000191.1 RefSeq gene 12645 13106 . - . ID=gene-C9E95_RS22465;Name=C9E95_RS22465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22465;old_locus_tag=C9E95_23050 NZ_PYJW01000191.1 Protein Homology CDS 12645 13106 . - 0 ID=cds-WP_000211979.1;Parent=gene-C9E95_RS22465;Dbxref=GenBank:WP_000211979.1;Name=WP_000211979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463372.1;locus_tag=C9E95_RS22465;product=YjiG family protein;protein_id=WP_000211979.1;transl_table=11 NZ_PYJW01000191.1 RefSeq gene 13103 13774 . - . ID=gene-C9E95_RS22470;Name=C9E95_RS22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS22470;old_locus_tag=C9E95_23055 NZ_PYJW01000191.1 Protein Homology CDS 13103 13774 . - 0 ID=cds-WP_000068752.1;Parent=gene-C9E95_RS22470;Dbxref=GenBank:WP_000068752.1;Name=WP_000068752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418750.2;locus_tag=C9E95_RS22470;product=nucleoside recognition domain-containing protein;protein_id=WP_000068752.1;transl_table=11 ##sequence-region NZ_PYJW01000045.1 1 13312 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000045.1 RefSeq region 1 13312 . + . ID=NZ_PYJW01000045.1:1..13312;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000045.1 RefSeq gene 233 1369 . + . ID=gene-C9E95_RS03405;Name=C9E95_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03405;old_locus_tag=C9E95_03480 NZ_PYJW01000045.1 Protein Homology CDS 233 1369 . + 0 ID=cds-WP_000865526.1;Parent=gene-C9E95_RS03405;Dbxref=GenBank:WP_000865526.1;Name=WP_000865526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461210.1;locus_tag=C9E95_RS03405;product=porin OmpC;protein_id=WP_000865526.1;transl_table=11 NZ_PYJW01000045.1 RefSeq gene 1484 2536 . + . ID=gene-C9E95_RS03410;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=C9E95_RS03410;old_locus_tag=C9E95_03485 NZ_PYJW01000045.1 Protein Homology CDS 1484 2536 . + 0 ID=cds-WP_058215968.1;Parent=gene-C9E95_RS03410;Dbxref=GenBank:WP_058215968.1;Name=WP_058215968.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461209.1;locus_tag=C9E95_RS03410;product=FAD:protein FMN transferase ApbE;protein_id=WP_058215968.1;transl_table=11 NZ_PYJW01000045.1 RefSeq gene 2617 3678 . + . ID=gene-C9E95_RS03415;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=C9E95_RS03415;old_locus_tag=C9E95_03490 NZ_PYJW01000045.1 Protein Homology CDS 2617 3678 . + 0 ID=cds-WP_000975968.1;Parent=gene-C9E95_RS03415;Dbxref=GenBank:WP_000975968.1;Name=WP_000975968.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461208.1;locus_tag=C9E95_RS03415;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_000975968.1;transl_table=11 NZ_PYJW01000045.1 RefSeq gene 3681 4331 . + . ID=gene-C9E95_RS03420;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=C9E95_RS03420;old_locus_tag=C9E95_03495 NZ_PYJW01000045.1 Protein Homology CDS 3681 4331 . + 0 ID=cds-WP_080203964.1;Parent=gene-C9E95_RS03420;Dbxref=GenBank:WP_080203964.1;Name=WP_080203964.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461207.1;locus_tag=C9E95_RS03420;product=DNA oxidative demethylase AlkB;protein_id=WP_080203964.1;transl_table=11 NZ_PYJW01000045.1 RefSeq gene 4407 6050 . + . ID=gene-C9E95_RS03425;Name=C9E95_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03425;old_locus_tag=C9E95_03500 NZ_PYJW01000045.1 Protein Homology CDS 4407 6050 . + 0 ID=cds-WP_080203963.1;Parent=gene-C9E95_RS03425;Dbxref=GenBank:WP_080203963.1;Name=WP_080203963.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461206.1;locus_tag=C9E95_RS03425;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_080203963.1;transl_table=11 NZ_PYJW01000045.1 RefSeq gene 6250 6744 . - . ID=gene-C9E95_RS03430;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=C9E95_RS03430;old_locus_tag=C9E95_03505 NZ_PYJW01000045.1 Protein Homology CDS 6250 6744 . - 0 ID=cds-WP_023193162.1;Parent=gene-C9E95_RS03430;Dbxref=GenBank:WP_023193162.1;Name=WP_023193162.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461205.1;locus_tag=C9E95_RS03430;product=serine protease inhibitor ecotin;protein_id=WP_023193162.1;transl_table=11 NZ_PYJW01000045.1 RefSeq gene 7158 7649 . + . ID=gene-C9E95_RS03435;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=C9E95_RS03435;old_locus_tag=C9E95_03510 NZ_PYJW01000045.1 Protein Homology CDS 7158 7649 . + 0 ID=cds-WP_023993399.1;Parent=gene-C9E95_RS03435;Dbxref=GenBank:WP_023993399.1;Name=WP_023993399.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461204.1;locus_tag=C9E95_RS03435;product=ferredoxin-type protein NapF;protein_id=WP_023993399.1;transl_table=11 NZ_PYJW01000045.1 RefSeq gene 7639 7902 . + . ID=gene-C9E95_RS03440;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=C9E95_RS03440;old_locus_tag=C9E95_03515 NZ_PYJW01000045.1 Protein Homology CDS 7639 7902 . + 0 ID=cds-WP_001260058.1;Parent=gene-C9E95_RS03440;Dbxref=GenBank:WP_001260058.1;Name=WP_001260058.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461203.1;locus_tag=C9E95_RS03440;product=chaperone NapD;protein_id=WP_001260058.1;transl_table=11 NZ_PYJW01000045.1 RefSeq gene 7899 10385 . + . ID=gene-C9E95_RS03445;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=C9E95_RS03445;old_locus_tag=C9E95_03520 NZ_PYJW01000045.1 Protein Homology CDS 7899 10385 . + 0 ID=cds-WP_000778090.1;Parent=gene-C9E95_RS03445;Dbxref=GenBank:WP_000778090.1;Name=WP_000778090.1;Ontology_term=GO:0008940,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;gene=napA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461202.1;locus_tag=C9E95_RS03445;product=nitrate reductase catalytic subunit NapA;protein_id=WP_000778090.1;transl_table=11 NZ_PYJW01000045.1 RefSeq gene 10392 11087 . + . ID=gene-C9E95_RS03450;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=C9E95_RS03450;old_locus_tag=C9E95_03525 NZ_PYJW01000045.1 Protein Homology CDS 10392 11087 . + 0 ID=cds-WP_000091679.1;Parent=gene-C9E95_RS03450;Dbxref=GenBank:WP_000091679.1;Name=WP_000091679.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461201.1;locus_tag=C9E95_RS03450;product=ferredoxin-type protein NapG;protein_id=WP_000091679.1;transl_table=11 NZ_PYJW01000045.1 RefSeq gene 11074 11943 . + . ID=gene-C9E95_RS03455;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=C9E95_RS03455;old_locus_tag=C9E95_03530 NZ_PYJW01000045.1 Protein Homology CDS 11074 11943 . + 0 ID=cds-WP_000013529.1;Parent=gene-C9E95_RS03455;Dbxref=GenBank:WP_000013529.1;Name=WP_000013529.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461200.1;locus_tag=C9E95_RS03455;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_000013529.1;transl_table=11 NZ_PYJW01000045.1 RefSeq gene 12059 12508 . + . ID=gene-C9E95_RS03460;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=C9E95_RS03460;old_locus_tag=C9E95_03540 NZ_PYJW01000045.1 Protein Homology CDS 12059 12508 . + 0 ID=cds-WP_000835182.1;Parent=gene-C9E95_RS03460;Dbxref=GenBank:WP_000835182.1;Name=WP_000835182.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461199.1;locus_tag=C9E95_RS03460;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_000835182.1;transl_table=11 NZ_PYJW01000045.1 RefSeq gene 12518 13120 . + . ID=gene-C9E95_RS03465;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=C9E95_RS03465;old_locus_tag=C9E95_03545 NZ_PYJW01000045.1 Protein Homology CDS 12518 13120 . + 0 ID=cds-WP_000431778.1;Parent=gene-C9E95_RS03465;Dbxref=GenBank:WP_000431778.1;Name=WP_000431778.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461198.1;locus_tag=C9E95_RS03465;product=cytochrome c-type protein NapC;protein_id=WP_000431778.1;transl_table=11 NZ_PYJW01000045.1 RefSeq gene 13141 13312 . + . ID=gene-C9E95_RS03470;Name=C9E95_RS03470;end_range=13312,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS03470;old_locus_tag=C9E95_03550;partial=true NZ_PYJW01000045.1 Protein Homology CDS 13141 13312 . + 0 ID=cds-WP_135369813.1;Parent=gene-C9E95_RS03470;Dbxref=GenBank:WP_135369813.1;Name=WP_135369813.1;Ontology_term=GO:0005524;end_range=13312,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=C9E95_RS03470;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_135369813.1;transl_table=11 ##sequence-region NZ_PYJW01000083.1 1 12746 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000083.1 RefSeq region 1 12746 . + . ID=NZ_PYJW01000083.1:1..12746;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000083.1 RefSeq gene 1 92 . + . ID=gene-C9E95_RS08725;Name=C9E95_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS08725;old_locus_tag=C9E95_08940;partial=true;start_range=.,1 NZ_PYJW01000083.1 Protein Homology CDS 1 92 . + 2 ID=cds-WP_001676084.1-2;Parent=gene-C9E95_RS08725;Dbxref=GenBank:WP_001676084.1;Name=WP_001676084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=C9E95_RS08725;partial=true;product=elongation factor Tu;protein_id=WP_001676084.1;start_range=.,1;transl_table=11 NZ_PYJW01000083.1 RefSeq gene 322 705 . + . ID=gene-C9E95_RS08730;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=C9E95_RS08730;old_locus_tag=C9E95_08945 NZ_PYJW01000083.1 Protein Homology CDS 322 705 . + 0 ID=cds-WP_001275691.1;Parent=gene-C9E95_RS08730;Dbxref=GenBank:WP_001275691.1;Name=WP_001275691.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=C9E95_RS08730;product=preprotein translocase subunit SecE;protein_id=WP_001275691.1;transl_table=11 NZ_PYJW01000083.1 RefSeq gene 707 1252 . + . ID=gene-C9E95_RS08735;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=C9E95_RS08735;old_locus_tag=C9E95_08950 NZ_PYJW01000083.1 Protein Homology CDS 707 1252 . + 0 ID=cds-WP_001287521.1;Parent=gene-C9E95_RS08735;Dbxref=GenBank:WP_001287521.1;Name=WP_001287521.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=C9E95_RS08735;product=transcription termination/antitermination protein NusG;protein_id=WP_001287521.1;transl_table=11 NZ_PYJW01000083.1 RefSeq gene 1410 1838 . + . ID=gene-C9E95_RS08740;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=C9E95_RS08740;old_locus_tag=C9E95_08955 NZ_PYJW01000083.1 Protein Homology CDS 1410 1838 . + 0 ID=cds-WP_001085926.1;Parent=gene-C9E95_RS08740;Dbxref=GenBank:WP_001085926.1;Name=WP_001085926.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=C9E95_RS08740;product=50S ribosomal protein L11;protein_id=WP_001085926.1;transl_table=11 NZ_PYJW01000083.1 RefSeq gene 1842 2546 . + . ID=gene-C9E95_RS08745;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=C9E95_RS08745;old_locus_tag=C9E95_08960 NZ_PYJW01000083.1 Protein Homology CDS 1842 2546 . + 0 ID=cds-WP_001096676.1;Parent=gene-C9E95_RS08745;Dbxref=GenBank:WP_001096676.1;Name=WP_001096676.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463019.1;locus_tag=C9E95_RS08745;product=50S ribosomal protein L1;protein_id=WP_001096676.1;transl_table=11 NZ_PYJW01000083.1 RefSeq gene 2966 3463 . + . ID=gene-C9E95_RS08750;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=C9E95_RS08750;old_locus_tag=C9E95_08970 NZ_PYJW01000083.1 Protein Homology CDS 2966 3463 . + 0 ID=cds-WP_001207203.1;Parent=gene-C9E95_RS08750;Dbxref=GenBank:WP_001207203.1;Name=WP_001207203.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=C9E95_RS08750;product=50S ribosomal protein L10;protein_id=WP_001207203.1;transl_table=11 NZ_PYJW01000083.1 RefSeq gene 3530 3895 . + . ID=gene-C9E95_RS08755;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=C9E95_RS08755;old_locus_tag=C9E95_08975 NZ_PYJW01000083.1 Protein Homology CDS 3530 3895 . + 0 ID=cds-WP_000028882.1;Parent=gene-C9E95_RS08755;Dbxref=GenBank:WP_000028882.1;Name=WP_000028882.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=C9E95_RS08755;product=50S ribosomal protein L7/L12;protein_id=WP_000028882.1;transl_table=11 NZ_PYJW01000083.1 RefSeq gene 4213 8241 . + . ID=gene-C9E95_RS08760;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=C9E95_RS08760;old_locus_tag=C9E95_08980 NZ_PYJW01000083.1 Protein Homology CDS 4213 8241 . + 0 ID=cds-WP_000263105.1;Parent=gene-C9E95_RS08760;Dbxref=GenBank:WP_000263105.1;Name=WP_000263105.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=C9E95_RS08760;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_000263105.1;transl_table=11 NZ_PYJW01000083.1 RefSeq gene 8318 12541 . + . ID=gene-C9E95_RS08765;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=C9E95_RS08765;old_locus_tag=C9E95_08985 NZ_PYJW01000083.1 Protein Homology CDS 8318 12541 . + 0 ID=cds-WP_000653965.1;Parent=gene-C9E95_RS08765;Dbxref=GenBank:WP_000653965.1;Name=WP_000653965.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463023.1;locus_tag=C9E95_RS08765;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_000653965.1;transl_table=11 NZ_PYJW01000083.1 RefSeq pseudogene 12583 12746 . + . ID=gene-C9E95_RS23445;Name=C9E95_RS23445;end_range=12746,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23445;partial=true;pseudo=true NZ_PYJW01000083.1 Protein Homology CDS 12583 12746 . + 0 ID=cds-C9E95_RS23445;Parent=gene-C9E95_RS23445;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=12746,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463024.1;locus_tag=C9E95_RS23445;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_PYJW01000056.1 1 10860 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000056.1 RefSeq region 1 10860 . + . ID=NZ_PYJW01000056.1:1..10860;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000056.1 RefSeq gene 221 1888 . - . ID=gene-C9E95_RS04890;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=C9E95_RS04890;old_locus_tag=C9E95_05010 NZ_PYJW01000056.1 Protein Homology CDS 221 1888 . - 0 ID=cds-WP_023207670.1;Parent=gene-C9E95_RS04890;Dbxref=GenBank:WP_023207670.1;Name=WP_023207670.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459671.1;locus_tag=C9E95_RS04890;product=glutamine--tRNA ligase;protein_id=WP_023207670.1;transl_table=11 NZ_PYJW01000056.1 RefSeq gene 2099 4051 . - . ID=gene-C9E95_RS04895;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=C9E95_RS04895;old_locus_tag=C9E95_05015 NZ_PYJW01000056.1 Protein Homology CDS 2099 4051 . - 0 ID=cds-WP_080203770.1;Parent=gene-C9E95_RS04895;Dbxref=GenBank:WP_080203770.1;Name=WP_080203770.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459670.1;locus_tag=C9E95_RS04895;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_080203770.1;transl_table=11 NZ_PYJW01000056.1 RefSeq gene 4378 5178 . + . ID=gene-C9E95_RS04900;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=C9E95_RS04900;old_locus_tag=C9E95_05020 NZ_PYJW01000056.1 Protein Homology CDS 4378 5178 . + 0 ID=cds-WP_001237059.1;Parent=gene-C9E95_RS04900;Dbxref=GenBank:WP_001237059.1;Name=WP_001237059.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=C9E95_RS04900;product=glucosamine-6-phosphate deaminase;protein_id=WP_001237059.1;transl_table=11 NZ_PYJW01000056.1 RefSeq gene 5238 6392 . + . ID=gene-C9E95_RS04905;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=C9E95_RS04905;old_locus_tag=C9E95_05025 NZ_PYJW01000056.1 Protein Homology CDS 5238 6392 . + 0 ID=cds-WP_000271186.1;Parent=gene-C9E95_RS04905;Dbxref=GenBank:WP_000271186.1;Name=WP_000271186.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459668.1;locus_tag=C9E95_RS04905;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_000271186.1;transl_table=11 NZ_PYJW01000056.1 RefSeq gene 6397 7617 . + . ID=gene-C9E95_RS04910;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=C9E95_RS04910;old_locus_tag=C9E95_05030 NZ_PYJW01000056.1 Protein Homology CDS 6397 7617 . + 0 ID=cds-WP_000187578.1;Parent=gene-C9E95_RS04910;Dbxref=GenBank:WP_000187578.1;Name=WP_000187578.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459667.1;locus_tag=C9E95_RS04910;product=DNA-binding transcriptional regulator NagC;protein_id=WP_000187578.1;transl_table=11 NZ_PYJW01000056.1 RefSeq gene 7664 8416 . + . ID=gene-C9E95_RS04915;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=C9E95_RS04915;old_locus_tag=C9E95_05035 NZ_PYJW01000056.1 Protein Homology CDS 7664 8416 . + 0 ID=cds-WP_000153143.1;Parent=gene-C9E95_RS04915;Dbxref=GenBank:WP_000153143.1;Name=WP_000153143.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373873.1;locus_tag=C9E95_RS04915;product=ribonucleotide monophosphatase NagD;protein_id=WP_000153143.1;transl_table=11 NZ_PYJW01000056.1 RefSeq gene 8706 10370 . + . ID=gene-C9E95_RS04920;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=C9E95_RS04920;old_locus_tag=C9E95_05040 NZ_PYJW01000056.1 Protein Homology CDS 8706 10370 . + 0 ID=cds-WP_000337034.1;Parent=gene-C9E95_RS04920;Dbxref=GenBank:WP_000337034.1;Name=WP_000337034.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=C9E95_RS04920;product=asparagine synthase B;protein_id=WP_000337034.1;transl_table=11 NZ_PYJW01000056.1 RefSeq gene 10592 10668 . + . ID=gene-C9E95_RS04925;Name=C9E95_RS04925;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS04925;old_locus_tag=C9E95_05045 NZ_PYJW01000056.1 tRNAscan-SE tRNA 10592 10668 . + . ID=rna-C9E95_RS04925;Parent=gene-C9E95_RS04925;anticodon=(pos:10626..10628);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS04925;product=tRNA-Met NZ_PYJW01000056.1 tRNAscan-SE exon 10592 10668 . + . ID=exon-C9E95_RS04925-1;Parent=rna-C9E95_RS04925;anticodon=(pos:10626..10628);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS04925;product=tRNA-Met NZ_PYJW01000056.1 RefSeq gene 10677 10761 . + . ID=gene-C9E95_RS04930;Name=C9E95_RS04930;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS04930;old_locus_tag=C9E95_05050 NZ_PYJW01000056.1 tRNAscan-SE tRNA 10677 10761 . + . ID=rna-C9E95_RS04930;Parent=gene-C9E95_RS04930;anticodon=(pos:10711..10713);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS04930;product=tRNA-Leu NZ_PYJW01000056.1 tRNAscan-SE exon 10677 10761 . + . ID=exon-C9E95_RS04930-1;Parent=rna-C9E95_RS04930;anticodon=(pos:10711..10713);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS04930;product=tRNA-Leu NZ_PYJW01000056.1 RefSeq gene 10785 10859 . + . ID=gene-C9E95_RS04935;Name=C9E95_RS04935;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E95_RS04935;old_locus_tag=C9E95_05055 NZ_PYJW01000056.1 tRNAscan-SE tRNA 10785 10859 . + . ID=rna-C9E95_RS04935;Parent=gene-C9E95_RS04935;anticodon=(pos:10817..10819);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS04935;product=tRNA-Gln NZ_PYJW01000056.1 tRNAscan-SE exon 10785 10859 . + . ID=exon-C9E95_RS04935-1;Parent=rna-C9E95_RS04935;anticodon=(pos:10817..10819);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E95_RS04935;product=tRNA-Gln ##sequence-region NZ_PYJW01000148.1 1 10595 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000148.1 RefSeq region 1 10595 . + . ID=NZ_PYJW01000148.1:1..10595;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000148.1 RefSeq gene 1 360 . + . ID=gene-C9E95_RS17985;Name=C9E95_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17985;old_locus_tag=C9E95_18430;partial=true;start_range=.,1 NZ_PYJW01000148.1 Protein Homology CDS 1 360 . + 0 ID=cds-WP_116733543.1;Parent=gene-C9E95_RS17985;Dbxref=GenBank:WP_116733543.1;Name=WP_116733543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463231.1;locus_tag=C9E95_RS17985;partial=true;product=YjfI family protein;protein_id=WP_116733543.1;start_range=.,1;transl_table=11 NZ_PYJW01000148.1 RefSeq gene 375 1073 . + . ID=gene-C9E95_RS17990;Name=C9E95_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS17990;old_locus_tag=C9E95_18435 NZ_PYJW01000148.1 Protein Homology CDS 375 1073 . + 0 ID=cds-WP_000511974.1;Parent=gene-C9E95_RS17990;Dbxref=GenBank:WP_000511974.1;Name=WP_000511974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463232.1;locus_tag=C9E95_RS17990;product=PspA/IM30 family protein;protein_id=WP_000511974.1;transl_table=11 NZ_PYJW01000148.1 RefSeq pseudogene 1073 2143 . + . ID=gene-C9E95_RS17995;Name=C9E95_RS17995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS17995;old_locus_tag=C9E95_18440;pseudo=true NZ_PYJW01000148.1 Protein Homology CDS 1073 2143 . + 0 ID=cds-C9E95_RS17995;Parent=gene-C9E95_RS17995;Note=internal stop;Ontology_term=GO:0034220,GO:0071805,GO:0005216,GO:0005267,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic ion channel activity|0005216||IEA,potassium channel activity|0005267||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA,potassium ion transmembrane transport|0071805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463233.1;locus_tag=C9E95_RS17995;product=potassium channel family protein;pseudo=true;transl_table=11 NZ_PYJW01000148.1 RefSeq gene 2116 2799 . + . ID=gene-C9E95_RS18000;Name=C9E95_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18000;old_locus_tag=C9E95_18445 NZ_PYJW01000148.1 Protein Homology CDS 2116 2799 . + 0 ID=cds-WP_000090290.1;Parent=gene-C9E95_RS18000;Dbxref=GenBank:WP_000090290.1;Name=WP_000090290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463234.3;locus_tag=C9E95_RS18000;product=YjfK family protein;protein_id=WP_000090290.1;transl_table=11 NZ_PYJW01000148.1 RefSeq gene 2817 3215 . + . ID=gene-C9E95_RS18005;Name=C9E95_RS18005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18005;old_locus_tag=C9E95_18450 NZ_PYJW01000148.1 Protein Homology CDS 2817 3215 . + 0 ID=cds-WP_000547737.1;Parent=gene-C9E95_RS18005;Dbxref=GenBank:WP_000547737.1;Name=WP_000547737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463235.1;locus_tag=C9E95_RS18005;product=DUF350 domain-containing protein;protein_id=WP_000547737.1;transl_table=11 NZ_PYJW01000148.1 RefSeq gene 3225 3863 . + . ID=gene-C9E95_RS18010;Name=C9E95_RS18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18010;old_locus_tag=C9E95_18455 NZ_PYJW01000148.1 Protein Homology CDS 3225 3863 . + 0 ID=cds-WP_001085596.1;Parent=gene-C9E95_RS18010;Dbxref=GenBank:WP_001085596.1;Name=WP_001085596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463236.1;locus_tag=C9E95_RS18010;product=DUF1190 domain-containing protein;protein_id=WP_001085596.1;transl_table=11 NZ_PYJW01000148.1 RefSeq gene 3866 5029 . + . ID=gene-C9E95_RS18015;Name=C9E95_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18015;old_locus_tag=C9E95_18460 NZ_PYJW01000148.1 Protein Homology CDS 3866 5029 . + 0 ID=cds-WP_080203663.1;Parent=gene-C9E95_RS18015;Dbxref=GenBank:WP_080203663.1;Name=WP_080203663.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463237.1;locus_tag=C9E95_RS18015;product=glutathionylspermidine synthase family protein;protein_id=WP_080203663.1;transl_table=11 NZ_PYJW01000148.1 RefSeq gene 5114 6736 . + . ID=gene-C9E95_RS18020;Name=C9E95_RS18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18020;old_locus_tag=C9E95_18465 NZ_PYJW01000148.1 Protein Homology CDS 5114 6736 . + 0 ID=cds-WP_000118964.1;Parent=gene-C9E95_RS18020;Dbxref=GenBank:WP_000118964.1;Name=WP_000118964.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463238.3;locus_tag=C9E95_RS18020;product=isovaleryl-CoA dehydrogenase;protein_id=WP_000118964.1;transl_table=11 NZ_PYJW01000148.1 RefSeq gene 6781 7056 . - . ID=gene-C9E95_RS18025;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=C9E95_RS18025;old_locus_tag=C9E95_18470 NZ_PYJW01000148.1 Protein Homology CDS 6781 7056 . - 0 ID=cds-WP_001518964.1;Parent=gene-C9E95_RS18025;Dbxref=GenBank:WP_001518964.1;Name=WP_001518964.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134428.1;locus_tag=C9E95_RS18025;product=DUF1471 family protease activator YjfN;protein_id=WP_001518964.1;transl_table=11 NZ_PYJW01000148.1 RefSeq gene 7187 7516 . - . ID=gene-C9E95_RS18030;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=C9E95_RS18030;old_locus_tag=C9E95_18475 NZ_PYJW01000148.1 Protein Homology CDS 7187 7516 . - 0 ID=cds-WP_023993521.1;Parent=gene-C9E95_RS18030;Dbxref=GenBank:WP_023993521.1;Name=WP_023993521.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463240.1;locus_tag=C9E95_RS18030;product=biofilm peroxide resistance protein BsmA;protein_id=WP_023993521.1;transl_table=11 NZ_PYJW01000148.1 RefSeq gene 7700 8449 . + . ID=gene-C9E95_RS18035;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=C9E95_RS18035;old_locus_tag=C9E95_18480 NZ_PYJW01000148.1 Protein Homology CDS 7700 8449 . + 0 ID=cds-WP_000560313.1;Parent=gene-C9E95_RS18035;Dbxref=GenBank:WP_000560313.1;Name=WP_000560313.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463241.1;locus_tag=C9E95_RS18035;product=esterase;protein_id=WP_000560313.1;transl_table=11 NZ_PYJW01000148.1 RefSeq gene 8446 9201 . - . ID=gene-C9E95_RS18040;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=C9E95_RS18040;old_locus_tag=C9E95_18485 NZ_PYJW01000148.1 Protein Homology CDS 8446 9201 . - 0 ID=cds-WP_000133618.1;Parent=gene-C9E95_RS18040;Dbxref=GenBank:WP_000133618.1;Name=WP_000133618.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463242.1;locus_tag=C9E95_RS18040;product=HTH-type transcriptional regulator UlaR;protein_id=WP_000133618.1;transl_table=11 NZ_PYJW01000148.1 RefSeq gene 9306 10370 . - . ID=gene-C9E95_RS18045;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=C9E95_RS18045;old_locus_tag=C9E95_18490 NZ_PYJW01000148.1 Protein Homology CDS 9306 10370 . - 0 ID=cds-WP_000049161.1;Parent=gene-C9E95_RS18045;Dbxref=GenBank:WP_000049161.1;Name=WP_000049161.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=C9E95_RS18045;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_000049161.1;transl_table=11 ##sequence-region NZ_PYJW01000161.1 1 10177 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000161.1 RefSeq region 1 10177 . + . ID=NZ_PYJW01000161.1:1..10177;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000161.1 RefSeq gene 1 1327 . - . ID=gene-C9E95_RS18620;Name=C9E95_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18620;old_locus_tag=C9E95_19080;partial=true;start_range=.,1 NZ_PYJW01000161.1 Protein Homology CDS 1 1327 . - 0 ID=cds-WP_135369874.1;Parent=gene-C9E95_RS18620;Dbxref=GenBank:WP_135369874.1;Name=WP_135369874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001604631.1;locus_tag=C9E95_RS18620;partial=true;product=hypothetical protein;protein_id=WP_135369874.1;start_range=.,1;transl_table=11 NZ_PYJW01000161.1 RefSeq gene 1859 2425 . - . ID=gene-C9E95_RS18630;Name=C9E95_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18630;old_locus_tag=C9E95_19090 NZ_PYJW01000161.1 Protein Homology CDS 1859 2425 . - 0 ID=cds-WP_080204053.1;Parent=gene-C9E95_RS18630;Dbxref=GenBank:WP_080204053.1;Name=WP_080204053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210078.1;locus_tag=C9E95_RS18630;product=phage polarity suppression protein;protein_id=WP_080204053.1;transl_table=11 NZ_PYJW01000161.1 RefSeq gene 2442 2684 . - . ID=gene-C9E95_RS18635;Name=C9E95_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18635;old_locus_tag=C9E95_19095 NZ_PYJW01000161.1 Protein Homology CDS 2442 2684 . - 0 ID=cds-WP_000984209.1;Parent=gene-C9E95_RS18635;Dbxref=GenBank:WP_000984209.1;Name=WP_000984209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000984207.1;locus_tag=C9E95_RS18635;product=ogr/Delta-like zinc finger family protein;protein_id=WP_000984209.1;transl_table=11 NZ_PYJW01000161.1 RefSeq gene 2681 3418 . - . ID=gene-C9E95_RS18640;Name=C9E95_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18640;old_locus_tag=C9E95_19100 NZ_PYJW01000161.1 Protein Homology CDS 2681 3418 . - 0 ID=cds-WP_000149860.1;Parent=gene-C9E95_RS18640;Dbxref=GenBank:WP_000149860.1;Name=WP_000149860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016234818.1;locus_tag=C9E95_RS18640;product=hypothetical protein;protein_id=WP_000149860.1;transl_table=11 NZ_PYJW01000161.1 RefSeq gene 3956 4222 . + . ID=gene-C9E95_RS18650;Name=C9E95_RS18650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18650;old_locus_tag=C9E95_19110 NZ_PYJW01000161.1 Protein Homology CDS 3956 4222 . + 0 ID=cds-WP_000556594.1;Parent=gene-C9E95_RS18650;Dbxref=GenBank:WP_000556594.1;Name=WP_000556594.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224849.1;locus_tag=C9E95_RS18650;product=helix-turn-helix transcriptional regulator;protein_id=WP_000556594.1;transl_table=11 NZ_PYJW01000161.1 RefSeq gene 4219 4770 . + . ID=gene-C9E95_RS18655;Name=C9E95_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18655;old_locus_tag=C9E95_19115 NZ_PYJW01000161.1 Protein Homology CDS 4219 4770 . + 0 ID=cds-WP_015701354.1;Parent=gene-C9E95_RS18655;Dbxref=GenBank:WP_015701354.1;Name=WP_015701354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364305.1;locus_tag=C9E95_RS18655;product=host cell division inhibitor Icd-like protein;protein_id=WP_015701354.1;transl_table=11 NZ_PYJW01000161.1 RefSeq gene 4767 4994 . + . ID=gene-C9E95_RS18660;Name=C9E95_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18660;old_locus_tag=C9E95_19120 NZ_PYJW01000161.1 Protein Homology CDS 4767 4994 . + 0 ID=cds-WP_001216603.1;Parent=gene-C9E95_RS18660;Dbxref=GenBank:WP_001216603.1;Name=WP_001216603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001216597.1;locus_tag=C9E95_RS18660;product=hypothetical protein;protein_id=WP_001216603.1;transl_table=11 NZ_PYJW01000161.1 RefSeq gene 4991 5311 . + . ID=gene-C9E95_RS18665;Name=C9E95_RS18665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18665;old_locus_tag=C9E95_19125 NZ_PYJW01000161.1 Protein Homology CDS 4991 5311 . + 0 ID=cds-WP_000795388.1;Parent=gene-C9E95_RS18665;Dbxref=GenBank:WP_000795388.1;Name=WP_000795388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224852.1;locus_tag=C9E95_RS18665;product=DUF5375 domain-containing protein;protein_id=WP_000795388.1;transl_table=11 NZ_PYJW01000161.1 RefSeq gene 5326 7659 . + . ID=gene-C9E95_RS18670;Name=C9E95_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18670;old_locus_tag=C9E95_19130 NZ_PYJW01000161.1 Protein Homology CDS 5326 7659 . + 0 ID=cds-WP_080204052.1;Parent=gene-C9E95_RS18670;Dbxref=GenBank:WP_080204052.1;Name=WP_080204052.1;Ontology_term=GO:0003899,GO:0004386,GO:0008270;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA,helicase activity|0004386||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000783702.1;locus_tag=C9E95_RS18670;product=primase-helicase zinc-binding domain-containing protein;protein_id=WP_080204052.1;transl_table=11 NZ_PYJW01000161.1 RefSeq pseudogene 8259 8480 . - . ID=gene-C9E95_RS18675;Name=C9E95_RS18675;end_range=8480,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS18675;old_locus_tag=C9E95_19135;partial=true;pseudo=true;start_range=.,8259 NZ_PYJW01000161.1 Protein Homology CDS 8259 8480 . - 0 ID=cds-C9E95_RS18675;Parent=gene-C9E95_RS18675;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=8480,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784655.1;locus_tag=C9E95_RS18675;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,8259;transl_table=11 NZ_PYJW01000161.1 RefSeq gene 8508 9047 . - . ID=gene-C9E95_RS18680;Name=fljA;gbkey=Gene;gene=fljA;gene_biotype=protein_coding;locus_tag=C9E95_RS18680;old_locus_tag=C9E95_19140 NZ_PYJW01000161.1 Protein Homology CDS 8508 9047 . - 0 ID=cds-WP_023994244.1;Parent=gene-C9E95_RS18680;Dbxref=GenBank:WP_023994244.1;Name=WP_023994244.1;gbkey=CDS;gene=fljA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461697.1;locus_tag=C9E95_RS18680;product=phase 1 flagellin gene repressor FljA;protein_id=WP_023994244.1;transl_table=11 NZ_PYJW01000161.1 RefSeq gene 9115 10177 . - . ID=gene-C9E95_RS18685;Name=C9E95_RS18685;end_range=10177,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS18685;old_locus_tag=C9E95_19145;partial=true NZ_PYJW01000161.1 Protein Homology CDS 9115 10177 . - 1 ID=cds-WP_135369875.1;Parent=gene-C9E95_RS18685;Dbxref=GenBank:WP_135369875.1;Name=WP_135369875.1;Ontology_term=GO:0071973,GO:0005198;end_range=10177,.;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461698.1;locus_tag=C9E95_RS18685;partial=true;product=flagellin;protein_id=WP_135369875.1;transl_table=11 ##sequence-region NZ_PYJW01000055.1 1 90060 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=595 NZ_PYJW01000055.1 RefSeq region 1 90060 . + . ID=NZ_PYJW01000055.1:1..90060;Dbxref=taxon:595;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Infantis;strain=88sab;sub-species=enterica NZ_PYJW01000055.1 RefSeq gene 135 1244 . + . ID=gene-C9E95_RS04515;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=C9E95_RS04515;old_locus_tag=C9E95_04630 NZ_PYJW01000055.1 Protein Homology CDS 135 1244 . + 0 ID=cds-WP_080203892.1;Parent=gene-C9E95_RS04515;Dbxref=GenBank:WP_080203892.1;Name=WP_080203892.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462465.1;locus_tag=C9E95_RS04515;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_080203892.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 1304 2230 . + . ID=gene-C9E95_RS04520;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=C9E95_RS04520;old_locus_tag=C9E95_04635 NZ_PYJW01000055.1 Protein Homology CDS 1304 2230 . + 0 ID=cds-WP_000003007.1;Parent=gene-C9E95_RS04520;Dbxref=GenBank:WP_000003007.1;Name=WP_000003007.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=C9E95_RS04520;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_000003007.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 2227 3504 . + . ID=gene-C9E95_RS04525;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=C9E95_RS04525;old_locus_tag=C9E95_04640 NZ_PYJW01000055.1 Protein Homology CDS 2227 3504 . + 0 ID=cds-WP_080203891.1;Parent=gene-C9E95_RS04525;Dbxref=GenBank:WP_080203891.1;Name=WP_080203891.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462463.1;locus_tag=C9E95_RS04525;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_080203891.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 3501 4268 . + . ID=gene-C9E95_RS04530;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=C9E95_RS04530;old_locus_tag=C9E95_04645 NZ_PYJW01000055.1 Protein Homology CDS 3501 4268 . + 0 ID=cds-WP_000082083.1;Parent=gene-C9E95_RS04530;Dbxref=GenBank:WP_000082083.1;Name=WP_000082083.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=C9E95_RS04530;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_000082083.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 4270 4983 . + . ID=gene-C9E95_RS04535;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=C9E95_RS04535;old_locus_tag=C9E95_04650 NZ_PYJW01000055.1 Protein Homology CDS 4270 4983 . + 0 ID=cds-WP_000416114.1;Parent=gene-C9E95_RS04535;Dbxref=GenBank:WP_000416114.1;Name=WP_000416114.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462461.1;locus_tag=C9E95_RS04535;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_000416114.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 5114 5335 . + . ID=gene-C9E95_RS04540;Name=C9E95_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04540;old_locus_tag=C9E95_04655 NZ_PYJW01000055.1 Protein Homology CDS 5114 5335 . + 0 ID=cds-WP_023993856.1;Parent=gene-C9E95_RS04540;Dbxref=GenBank:WP_023993856.1;Name=WP_023993856.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229268.1;locus_tag=C9E95_RS04540;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_023993856.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 5332 5700 . + . ID=gene-C9E95_RS04545;Name=C9E95_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04545;old_locus_tag=C9E95_04660 NZ_PYJW01000055.1 Protein Homology CDS 5332 5700 . + 0 ID=cds-WP_023202025.1;Parent=gene-C9E95_RS04545;Dbxref=GenBank:WP_023202025.1;Name=WP_023202025.1;Ontology_term=GO:0016301,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=kinase activity|0016301||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462459.1;locus_tag=C9E95_RS04545;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WP_023202025.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 5959 7275 . + . ID=gene-C9E95_RS04550;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=C9E95_RS04550;old_locus_tag=C9E95_04665 NZ_PYJW01000055.1 Protein Homology CDS 5959 7275 . + 0 ID=cds-WP_023993857.1;Parent=gene-C9E95_RS04550;Dbxref=GenBank:WP_023993857.1;Name=WP_023993857.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462458.1;locus_tag=C9E95_RS04550;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_023993857.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 7380 8267 . + . ID=gene-C9E95_RS04555;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=C9E95_RS04555;old_locus_tag=C9E95_04670 NZ_PYJW01000055.1 Protein Homology CDS 7380 8267 . + 0 ID=cds-WP_000099303.1;Parent=gene-C9E95_RS04555;Dbxref=GenBank:WP_000099303.1;Name=WP_000099303.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=C9E95_RS04555;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_000099303.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 8264 9109 . + . ID=gene-C9E95_RS04560;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=C9E95_RS04560;old_locus_tag=C9E95_04675 NZ_PYJW01000055.1 Protein Homology CDS 8264 9109 . + 0 ID=cds-WP_000572196.1;Parent=gene-C9E95_RS04560;Dbxref=GenBank:WP_000572196.1;Name=WP_000572196.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=C9E95_RS04560;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_000572196.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 9111 10181 . + . ID=gene-C9E95_RS04565;Name=C9E95_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04565;old_locus_tag=C9E95_04680 NZ_PYJW01000055.1 Protein Homology CDS 9111 10181 . + 0 ID=cds-WP_000907842.1;Parent=gene-C9E95_RS04565;Dbxref=GenBank:WP_000907842.1;Name=WP_000907842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462455.1;locus_tag=C9E95_RS04565;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_000907842.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 10178 10918 . + . ID=gene-C9E95_RS04570;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=C9E95_RS04570;old_locus_tag=C9E95_04685 NZ_PYJW01000055.1 Protein Homology CDS 10178 10918 . + 0 ID=cds-WP_080203890.1;Parent=gene-C9E95_RS04570;Dbxref=GenBank:WP_080203890.1;Name=WP_080203890.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462454.1;locus_tag=C9E95_RS04570;product=glycerophosphodiester phosphodiesterase;protein_id=WP_080203890.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 10931 11347 . - . ID=gene-C9E95_RS04575;Name=C9E95_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04575;old_locus_tag=C9E95_04690 NZ_PYJW01000055.1 Protein Homology CDS 10931 11347 . - 0 ID=cds-WP_000826042.1;Parent=gene-C9E95_RS04575;Dbxref=GenBank:WP_000826042.1;Name=WP_000826042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462453.1;locus_tag=C9E95_RS04575;product=DUF2756 family protein;protein_id=WP_000826042.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 11473 13215 . + . ID=gene-C9E95_RS04580;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=C9E95_RS04580;old_locus_tag=C9E95_04695 NZ_PYJW01000055.1 Protein Homology CDS 11473 13215 . + 0 ID=cds-WP_047605570.1;Parent=gene-C9E95_RS04580;Dbxref=GenBank:WP_047605570.1;Name=WP_047605570.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462452.1;locus_tag=C9E95_RS04580;product=gamma-glutamyltransferase;protein_id=WP_047605570.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 13260 14294 . - . ID=gene-C9E95_RS04585;Name=C9E95_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04585;old_locus_tag=C9E95_04700 NZ_PYJW01000055.1 Protein Homology CDS 13260 14294 . - 0 ID=cds-WP_000675710.1;Parent=gene-C9E95_RS04585;Dbxref=GenBank:WP_000675710.1;Name=WP_000675710.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462451.1;locus_tag=C9E95_RS04585;product=phosphotriesterase family protein;protein_id=WP_000675710.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 14291 15262 . - . ID=gene-C9E95_RS04590;Name=C9E95_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04590;old_locus_tag=C9E95_04705 NZ_PYJW01000055.1 Protein Homology CDS 14291 15262 . - 0 ID=cds-WP_001038949.1;Parent=gene-C9E95_RS04590;Dbxref=GenBank:WP_001038949.1;Name=WP_001038949.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462450.1;locus_tag=C9E95_RS04590;product=DMT family transporter;protein_id=WP_001038949.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 15316 16077 . - . ID=gene-C9E95_RS04595;Name=C9E95_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04595;old_locus_tag=C9E95_04710 NZ_PYJW01000055.1 Protein Homology CDS 15316 16077 . - 0 ID=cds-WP_001066509.1;Parent=gene-C9E95_RS04595;Dbxref=GenBank:WP_001066509.1;Name=WP_001066509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462449.1;locus_tag=C9E95_RS04595;product=glutamine amidotransferase;protein_id=WP_001066509.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 16093 17307 . - . ID=gene-C9E95_RS04600;Name=C9E95_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04600;old_locus_tag=C9E95_04715 NZ_PYJW01000055.1 Protein Homology CDS 16093 17307 . - 0 ID=cds-WP_000667440.1;Parent=gene-C9E95_RS04600;Dbxref=GenBank:WP_000667440.1;Name=WP_000667440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462448.3;locus_tag=C9E95_RS04600;product=PfkB family carbohydrate kinase;protein_id=WP_000667440.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 17572 18060 . - . ID=gene-C9E95_RS04605;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=C9E95_RS04605;old_locus_tag=C9E95_04720 NZ_PYJW01000055.1 Protein Homology CDS 17572 18060 . - 0 ID=cds-WP_061372395.1;Parent=gene-C9E95_RS04605;Dbxref=GenBank:WP_061372395.1;Name=WP_061372395.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462447.1;locus_tag=C9E95_RS04605;product=N-acetyltransferase;protein_id=WP_061372395.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 18528 19565 . + . ID=gene-C9E95_RS04610;Name=C9E95_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04610;old_locus_tag=C9E95_04725 NZ_PYJW01000055.1 Protein Homology CDS 18528 19565 . + 0 ID=cds-WP_045902056.1;Parent=gene-C9E95_RS04610;Dbxref=GenBank:WP_045902056.1;Name=WP_045902056.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462446.1;locus_tag=C9E95_RS04610;product=oxidoreductase;protein_id=WP_045902056.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 19689 20384 . + . ID=gene-C9E95_RS04615;Name=C9E95_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04615;old_locus_tag=C9E95_04730 NZ_PYJW01000055.1 Protein Homology CDS 19689 20384 . + 0 ID=cds-WP_080203889.1;Parent=gene-C9E95_RS04615;Dbxref=GenBank:WP_080203889.1;Name=WP_080203889.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=C9E95_RS04615;product=pirin family protein;protein_id=WP_080203889.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 20609 21604 . + . ID=gene-C9E95_RS04620;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=C9E95_RS04620;old_locus_tag=C9E95_04735 NZ_PYJW01000055.1 Protein Homology CDS 20609 21604 . + 0 ID=cds-WP_000730238.1;Parent=gene-C9E95_RS04620;Dbxref=GenBank:WP_000730238.1;Name=WP_000730238.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=C9E95_RS04620;product=gluconate operon transcriptional repressor GntR;protein_id=WP_000730238.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 21743 22276 . + . ID=gene-C9E95_RS04625;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=C9E95_RS04625;old_locus_tag=C9E95_04740 NZ_PYJW01000055.1 Protein Homology CDS 21743 22276 . + 0 ID=cds-WP_080203888.1;Parent=gene-C9E95_RS04625;Dbxref=GenBank:WP_080203888.1;Name=WP_080203888.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462443.1;locus_tag=C9E95_RS04625;product=gluconokinase;protein_id=WP_080203888.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 22273 23613 . + . ID=gene-C9E95_RS04630;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=C9E95_RS04630;old_locus_tag=C9E95_04745 NZ_PYJW01000055.1 Protein Homology CDS 22273 23613 . + 0 ID=cds-WP_000105950.1;Parent=gene-C9E95_RS04630;Dbxref=GenBank:WP_000105950.1;Name=WP_000105950.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462442.1;locus_tag=C9E95_RS04630;product=gluconate transporter;protein_id=WP_000105950.1;transl_table=11 NZ_PYJW01000055.1 RefSeq pseudogene 23728 23802 . - . ID=gene-C9E95_RS23705;Name=C9E95_RS23705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E95_RS23705;partial=true;pseudo=true;start_range=.,23728 NZ_PYJW01000055.1 Protein Homology CDS 23728 23802 . - 0 ID=cds-C9E95_RS23705;Parent=gene-C9E95_RS23705;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312306.1;locus_tag=C9E95_RS23705;partial=true;product=MarC family protein;pseudo=true;start_range=.,23728;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 24037 25143 . + . ID=gene-C9E95_RS04640;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=C9E95_RS04640;old_locus_tag=C9E95_04755 NZ_PYJW01000055.1 Protein Homology CDS 24037 25143 . + 0 ID=cds-WP_000799940.1;Parent=gene-C9E95_RS04640;Dbxref=GenBank:WP_000799940.1;Name=WP_000799940.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462440.1;locus_tag=C9E95_RS04640;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799940.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 25490 27676 . + . ID=gene-C9E95_RS04645;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=C9E95_RS04645;old_locus_tag=C9E95_04760 NZ_PYJW01000055.1 Protein Homology CDS 25490 27676 . + 0 ID=cds-WP_079954304.1;Parent=gene-C9E95_RS04645;Dbxref=GenBank:WP_079954304.1;Name=WP_079954304.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462439.1;locus_tag=C9E95_RS04645;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_079954304.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 27673 29649 . + . ID=gene-C9E95_RS04650;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=C9E95_RS04650;old_locus_tag=C9E95_04765 NZ_PYJW01000055.1 Protein Homology CDS 27673 29649 . + 0 ID=cds-WP_020437703.1;Parent=gene-C9E95_RS04650;Dbxref=GenBank:WP_020437703.1;Name=WP_020437703.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462438.1;locus_tag=C9E95_RS04650;product=glycogen debranching protein GlgX;protein_id=WP_020437703.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 29664 30959 . + . ID=gene-C9E95_RS04655;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=C9E95_RS04655;old_locus_tag=C9E95_04770 NZ_PYJW01000055.1 Protein Homology CDS 29664 30959 . + 0 ID=cds-WP_000253994.1;Parent=gene-C9E95_RS04655;Dbxref=GenBank:WP_000253994.1;Name=WP_000253994.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462437.1;locus_tag=C9E95_RS04655;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000253994.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 30959 32392 . + . ID=gene-C9E95_RS04660;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=C9E95_RS04660;old_locus_tag=C9E95_04775 NZ_PYJW01000055.1 Protein Homology CDS 30959 32392 . + 0 ID=cds-WP_001197669.1;Parent=gene-C9E95_RS04660;Dbxref=GenBank:WP_001197669.1;Name=WP_001197669.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462436.1;locus_tag=C9E95_RS04660;product=glycogen synthase GlgA;protein_id=WP_001197669.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 32412 34859 . + . ID=gene-C9E95_RS04665;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=C9E95_RS04665;old_locus_tag=C9E95_04780 NZ_PYJW01000055.1 Protein Homology CDS 32412 34859 . + 0 ID=cds-WP_000993424.1;Parent=gene-C9E95_RS04665;Dbxref=GenBank:WP_000993424.1;Name=WP_000993424.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436446.1;locus_tag=C9E95_RS04665;product=glycogen phosphorylase;protein_id=WP_000993424.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 34989 36482 . + . ID=gene-C9E95_RS04670;Name=C9E95_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04670;old_locus_tag=C9E95_04785 NZ_PYJW01000055.1 Protein Homology CDS 34989 36482 . + 0 ID=cds-WP_135369820.1;Parent=gene-C9E95_RS04670;Dbxref=GenBank:WP_135369820.1;Name=WP_135369820.1;Ontology_term=GO:0006817,GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551775.1;locus_tag=C9E95_RS04670;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_135369820.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 36492 37037 . + . ID=gene-C9E95_RS04675;Name=C9E95_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04675;old_locus_tag=C9E95_04790 NZ_PYJW01000055.1 Protein Homology CDS 36492 37037 . + 0 ID=cds-WP_080203887.1;Parent=gene-C9E95_RS04675;Dbxref=GenBank:WP_080203887.1;Name=WP_080203887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462429.1;locus_tag=C9E95_RS04675;product=hypothetical protein;protein_id=WP_080203887.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 37084 38592 . - . ID=gene-C9E95_RS04680;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=C9E95_RS04680;old_locus_tag=C9E95_04795 NZ_PYJW01000055.1 Protein Homology CDS 37084 38592 . - 0 ID=cds-WP_000448178.1;Parent=gene-C9E95_RS04680;Dbxref=GenBank:WP_000448178.1;Name=WP_000448178.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462428.1;locus_tag=C9E95_RS04680;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_000448178.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 38791 39117 . + . ID=gene-C9E95_RS04685;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=C9E95_RS04685;old_locus_tag=C9E95_04800 NZ_PYJW01000055.1 Protein Homology CDS 38791 39117 . + 0 ID=cds-WP_000434523.1;Parent=gene-C9E95_RS04685;Dbxref=GenBank:WP_000434523.1;Name=WP_000434523.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462427.1;locus_tag=C9E95_RS04685;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_000434523.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 39193 40023 . + . ID=gene-C9E95_RS04690;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=C9E95_RS04690;old_locus_tag=C9E95_04805 NZ_PYJW01000055.1 Protein Homology CDS 39193 40023 . + 0 ID=cds-WP_000928699.1;Parent=gene-C9E95_RS04690;Dbxref=GenBank:WP_000928699.1;Name=WP_000928699.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462426.1;locus_tag=C9E95_RS04690;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_000928699.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 40117 40875 . + . ID=gene-C9E95_RS04695;Name=C9E95_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04695;old_locus_tag=C9E95_04810 NZ_PYJW01000055.1 Protein Homology CDS 40117 40875 . + 0 ID=cds-WP_000815085.1;Parent=gene-C9E95_RS04695;Dbxref=GenBank:WP_000815085.1;Name=WP_000815085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=C9E95_RS04695;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_000815085.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 40944 43649 . - . ID=gene-C9E95_RS04700;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=C9E95_RS04700;old_locus_tag=C9E95_04815 NZ_PYJW01000055.1 Protein Homology CDS 40944 43649 . - 0 ID=cds-WP_000907030.1;Parent=gene-C9E95_RS04700;Dbxref=GenBank:WP_000907030.1;Name=WP_000907030.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=C9E95_RS04700;product=HTH-type transcriptional regulator MalT;protein_id=WP_000907030.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 44244 46637 . + . ID=gene-C9E95_RS04705;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=C9E95_RS04705;old_locus_tag=C9E95_04820 NZ_PYJW01000055.1 Protein Homology CDS 44244 46637 . + 0 ID=cds-WP_023249794.1;Parent=gene-C9E95_RS04705;Dbxref=GenBank:WP_023249794.1;Name=WP_023249794.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462417.1;locus_tag=C9E95_RS04705;product=maltodextrin phosphorylase;protein_id=WP_023249794.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 46647 48725 . + . ID=gene-C9E95_RS04710;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=C9E95_RS04710;old_locus_tag=C9E95_04825 NZ_PYJW01000055.1 Protein Homology CDS 46647 48725 . + 0 ID=cds-WP_080203886.1;Parent=gene-C9E95_RS04710;Dbxref=GenBank:WP_080203886.1;Name=WP_080203886.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462416.1;locus_tag=C9E95_RS04710;product=4-alpha-glucanotransferase;protein_id=WP_080203886.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 48844 50160 . - . ID=gene-C9E95_RS04715;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=C9E95_RS04715;old_locus_tag=C9E95_04830 NZ_PYJW01000055.1 Protein Homology CDS 48844 50160 . - 0 ID=cds-WP_001131741.1;Parent=gene-C9E95_RS04715;Dbxref=GenBank:WP_001131741.1;Name=WP_001131741.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462415.1;locus_tag=C9E95_RS04715;product=gluconate transporter;protein_id=WP_001131741.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 50534 51109 . - . ID=gene-C9E95_RS04720;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=C9E95_RS04720;old_locus_tag=C9E95_04835 NZ_PYJW01000055.1 Protein Homology CDS 50534 51109 . - 0 ID=cds-WP_000619387.1;Parent=gene-C9E95_RS04720;Dbxref=GenBank:WP_000619387.1;Name=WP_000619387.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=C9E95_RS04720;product=Fe-S biogenesis protein NfuA;protein_id=WP_000619387.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 51168 51851 . - . ID=gene-C9E95_RS04725;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=C9E95_RS04725;old_locus_tag=C9E95_04840 NZ_PYJW01000055.1 Protein Homology CDS 51168 51851 . - 0 ID=cds-WP_000958733.1;Parent=gene-C9E95_RS04725;Dbxref=GenBank:WP_000958733.1;Name=WP_000958733.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462413.1;locus_tag=C9E95_RS04725;product=DNA utilization protein GntX;protein_id=WP_000958733.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 51889 52659 . + . ID=gene-C9E95_RS04730;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=C9E95_RS04730;old_locus_tag=C9E95_04845 NZ_PYJW01000055.1 Protein Homology CDS 51889 52659 . + 0 ID=cds-WP_000998138.1;Parent=gene-C9E95_RS04730;Dbxref=GenBank:WP_000998138.1;Name=WP_000998138.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462412.1;locus_tag=C9E95_RS04730;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_000998138.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 52695 53609 . - . ID=gene-C9E95_RS04735;Name=C9E95_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04735;old_locus_tag=C9E95_04850 NZ_PYJW01000055.1 Protein Homology CDS 52695 53609 . - 0 ID=cds-WP_000235946.1;Parent=gene-C9E95_RS04735;Dbxref=GenBank:WP_000235946.1;Name=WP_000235946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462411.1;locus_tag=C9E95_RS04735;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000235946.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 53844 54080 . - . ID=gene-C9E95_RS04740;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=C9E95_RS04740;old_locus_tag=C9E95_04855 NZ_PYJW01000055.1 Protein Homology CDS 53844 54080 . - 0 ID=cds-WP_000157587.1;Parent=gene-C9E95_RS04740;Dbxref=GenBank:WP_000157587.1;Name=WP_000157587.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462410.1;locus_tag=C9E95_RS04740;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_000157587.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 54093 56411 . - . ID=gene-C9E95_RS04745;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=C9E95_RS04745;old_locus_tag=C9E95_04860 NZ_PYJW01000055.1 Protein Homology CDS 54093 56411 . - 0 ID=cds-WP_023216665.1;Parent=gene-C9E95_RS04745;Dbxref=GenBank:WP_023216665.1;Name=WP_023216665.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462409.1;locus_tag=C9E95_RS04745;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_023216665.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 56430 56657 . - . ID=gene-C9E95_RS04750;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=C9E95_RS04750;old_locus_tag=C9E95_04865 NZ_PYJW01000055.1 Protein Homology CDS 56430 56657 . - 0 ID=cds-WP_001160955.1;Parent=gene-C9E95_RS04750;Dbxref=GenBank:WP_001160955.1;Name=WP_001160955.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462408.1;locus_tag=C9E95_RS04750;product=ferrous iron transporter A;protein_id=WP_001160955.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 57094 59424 . - . ID=gene-C9E95_RS04755;Name=C9E95_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04755;old_locus_tag=C9E95_04875 NZ_PYJW01000055.1 Protein Homology CDS 57094 59424 . - 0 ID=cds-WP_000980662.1;Parent=gene-C9E95_RS04755;Dbxref=GenBank:WP_000980662.1;Name=WP_000980662.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312276.2;locus_tag=C9E95_RS04755;product=Tex family protein;protein_id=WP_000980662.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 59523 59996 . - . ID=gene-C9E95_RS04760;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=C9E95_RS04760;old_locus_tag=C9E95_04880 NZ_PYJW01000055.1 Protein Homology CDS 59523 59996 . - 0 ID=cds-WP_000856695.1;Parent=gene-C9E95_RS04760;Dbxref=GenBank:WP_000856695.1;Name=WP_000856695.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=C9E95_RS04760;product=transcription elongation factor GreB;protein_id=WP_000856695.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 60222 60941 . + . ID=gene-C9E95_RS04765;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=C9E95_RS04765;old_locus_tag=C9E95_04885 NZ_PYJW01000055.1 Protein Homology CDS 60222 60941 . + 0 ID=cds-WP_001157751.1;Parent=gene-C9E95_RS04765;Dbxref=GenBank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007374840.1;locus_tag=C9E95_RS04765;product=osmolarity response regulator transcription factor OmpR;protein_id=WP_001157751.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 60938 62290 . + . ID=gene-C9E95_RS04770;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=C9E95_RS04770;old_locus_tag=C9E95_04890 NZ_PYJW01000055.1 Protein Homology CDS 60938 62290 . + 0 ID=cds-WP_001253818.1;Parent=gene-C9E95_RS04770;Dbxref=GenBank:WP_001253818.1;Name=WP_001253818.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462404.1;locus_tag=C9E95_RS04770;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_001253818.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 62365 63984 . - . ID=gene-C9E95_RS04775;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=C9E95_RS04775;old_locus_tag=C9E95_04895 NZ_PYJW01000055.1 Protein Homology CDS 62365 63984 . - 0 ID=cds-WP_001265689.1;Parent=gene-C9E95_RS04775;Dbxref=GenBank:WP_001265689.1;Name=WP_001265689.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462403.2;locus_tag=C9E95_RS04775;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_001265689.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 64364 66073 . + . ID=gene-C9E95_RS04780;Name=C9E95_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04780;old_locus_tag=C9E95_04900 NZ_PYJW01000055.1 Protein Homology CDS 64364 66073 . + 0 ID=cds-WP_135369821.1;Parent=gene-C9E95_RS04780;Dbxref=GenBank:WP_135369821.1;Name=WP_135369821.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462402.1;locus_tag=C9E95_RS04780;product=DUF4153 domain-containing protein;protein_id=WP_135369821.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 66184 67062 . - . ID=gene-C9E95_RS04785;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=C9E95_RS04785;old_locus_tag=C9E95_04905 NZ_PYJW01000055.1 Protein Homology CDS 66184 67062 . - 0 ID=cds-WP_001135571.1;Parent=gene-C9E95_RS04785;Dbxref=GenBank:WP_001135571.1;Name=WP_001135571.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=C9E95_RS04785;product=Hsp33 family molecular chaperone HslO;protein_id=WP_001135571.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 67087 67488 . - . ID=gene-C9E95_RS04790;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=C9E95_RS04790;old_locus_tag=C9E95_04910 NZ_PYJW01000055.1 Protein Homology CDS 67087 67488 . - 0 ID=cds-WP_000660719.1;Parent=gene-C9E95_RS04790;Dbxref=GenBank:WP_000660719.1;Name=WP_000660719.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462400.1;locus_tag=C9E95_RS04790;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_000660719.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 67499 68167 . - . ID=gene-C9E95_RS04795;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=C9E95_RS04795;old_locus_tag=C9E95_04915 NZ_PYJW01000055.1 Protein Homology CDS 67499 68167 . - 0 ID=cds-WP_023193854.1;Parent=gene-C9E95_RS04795;Dbxref=GenBank:WP_023193854.1;Name=WP_023193854.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006893127.1;locus_tag=C9E95_RS04795;product=GMP/IMP nucleotidase;protein_id=WP_023193854.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 68232 70364 . - . ID=gene-C9E95_RS04800;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=C9E95_RS04800;old_locus_tag=C9E95_04920 NZ_PYJW01000055.1 Protein Homology CDS 68232 70364 . - 0 ID=cds-WP_021000848.1;Parent=gene-C9E95_RS04800;Dbxref=GenBank:WP_021000848.1;Name=WP_021000848.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462398.1;locus_tag=C9E95_RS04800;product=intracellular growth attenuator protein IgaA;protein_id=WP_021000848.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 70687 71250 . + . ID=gene-C9E95_RS04805;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=C9E95_RS04805;old_locus_tag=C9E95_04925 NZ_PYJW01000055.1 Protein Homology CDS 70687 71250 . + 0 ID=cds-WP_000045725.1;Parent=gene-C9E95_RS04805;Dbxref=GenBank:WP_000045725.1;Name=WP_000045725.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000045725.1;locus_tag=C9E95_RS04805;product=ADP compounds hydrolase NudE;protein_id=WP_000045725.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 71346 73898 . - . ID=gene-C9E95_RS04810;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=C9E95_RS04810;old_locus_tag=C9E95_04930 NZ_PYJW01000055.1 Protein Homology CDS 71346 73898 . - 0 ID=cds-WP_000673819.1;Parent=gene-C9E95_RS04810;Dbxref=GenBank:WP_000673819.1;Name=WP_000673819.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=C9E95_RS04810;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_000673819.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 74019 74798 . + . ID=gene-C9E95_RS04815;Name=C9E95_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04815;old_locus_tag=C9E95_04935 NZ_PYJW01000055.1 Protein Homology CDS 74019 74798 . + 0 ID=cds-WP_000874748.1;Parent=gene-C9E95_RS04815;Dbxref=GenBank:WP_000874748.1;Name=WP_000874748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462395.1;locus_tag=C9E95_RS04815;product=hypothetical protein;protein_id=WP_000874748.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 74798 75337 . + . ID=gene-C9E95_RS04820;Name=C9E95_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04820;old_locus_tag=C9E95_04940 NZ_PYJW01000055.1 Protein Homology CDS 74798 75337 . + 0 ID=cds-WP_000951390.1;Parent=gene-C9E95_RS04820;Dbxref=GenBank:WP_000951390.1;Name=WP_000951390.1;Ontology_term=GO:0043107,GO:0043683;gbkey=CDS;go_process=type IV pilus-dependent motility|0043107||IEA,type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462394.1;locus_tag=C9E95_RS04820;product=PilN domain-containing protein;protein_id=WP_000951390.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 75321 75794 . + . ID=gene-C9E95_RS04825;Name=C9E95_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04825;old_locus_tag=C9E95_04945 NZ_PYJW01000055.1 Protein Homology CDS 75321 75794 . + 0 ID=cds-WP_023181711.1;Parent=gene-C9E95_RS04825;Dbxref=GenBank:WP_023181711.1;Name=WP_023181711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462393.1;locus_tag=C9E95_RS04825;product=hypothetical protein;protein_id=WP_023181711.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 75784 76185 . + . ID=gene-C9E95_RS04830;Name=C9E95_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04830;old_locus_tag=C9E95_04950 NZ_PYJW01000055.1 Protein Homology CDS 75784 76185 . + 0 ID=cds-WP_000648115.1;Parent=gene-C9E95_RS04830;Dbxref=GenBank:WP_000648115.1;Name=WP_000648115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462392.1;locus_tag=C9E95_RS04830;product=HofP DNA utilization family protein;protein_id=WP_000648115.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 76100 77338 . + . ID=gene-C9E95_RS04835;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=C9E95_RS04835;old_locus_tag=C9E95_04955 NZ_PYJW01000055.1 Protein Homology CDS 76100 77338 . + 0 ID=cds-WP_000832803.1;Parent=gene-C9E95_RS04835;Dbxref=GenBank:WP_000832803.1;Name=WP_000832803.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462391.1;locus_tag=C9E95_RS04835;product=DNA uptake porin HofQ;protein_id=WP_000832803.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 77803 78324 . + . ID=gene-C9E95_RS04845;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=C9E95_RS04845;old_locus_tag=C9E95_04965 NZ_PYJW01000055.1 Protein Homology CDS 77803 78324 . + 0 ID=cds-WP_000818621.1;Parent=gene-C9E95_RS04845;Dbxref=GenBank:WP_000818621.1;Name=WP_000818621.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=C9E95_RS04845;product=shikimate kinase AroK;protein_id=WP_000818621.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 78381 79469 . + . ID=gene-C9E95_RS04850;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=C9E95_RS04850;old_locus_tag=C9E95_04970 NZ_PYJW01000055.1 Protein Homology CDS 78381 79469 . + 0 ID=cds-WP_000439820.1;Parent=gene-C9E95_RS04850;Dbxref=GenBank:WP_000439820.1;Name=WP_000439820.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462389.1;locus_tag=C9E95_RS04850;product=3-dehydroquinate synthase;protein_id=WP_000439820.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 79567 80844 . + . ID=gene-C9E95_RS04855;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=C9E95_RS04855;old_locus_tag=C9E95_04975 NZ_PYJW01000055.1 Protein Homology CDS 79567 80844 . + 0 ID=cds-WP_000343147.1;Parent=gene-C9E95_RS04855;Dbxref=GenBank:WP_000343147.1;Name=WP_000343147.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462388.1;locus_tag=C9E95_RS04855;product=cell division protein DamX;protein_id=WP_000343147.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 81025 81861 . + . ID=gene-C9E95_RS04860;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=C9E95_RS04860;old_locus_tag=C9E95_04980 NZ_PYJW01000055.1 Protein Homology CDS 81025 81861 . + 0 ID=cds-WP_000742132.1;Parent=gene-C9E95_RS04860;Dbxref=GenBank:WP_000742132.1;Name=WP_000742132.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462387.1;locus_tag=C9E95_RS04860;product=adenine-specific DNA-methyltransferase;protein_id=WP_000742132.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 81879 82556 . + . ID=gene-C9E95_RS04865;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=C9E95_RS04865;old_locus_tag=C9E95_04985 NZ_PYJW01000055.1 Protein Homology CDS 81879 82556 . + 0 ID=cds-WP_000816286.1;Parent=gene-C9E95_RS04865;Dbxref=GenBank:WP_000816286.1;Name=WP_000816286.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462386.1;locus_tag=C9E95_RS04865;product=ribulose-phosphate 3-epimerase;protein_id=WP_000816286.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 82549 83307 . + . ID=gene-C9E95_RS04870;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=C9E95_RS04870;old_locus_tag=C9E95_04990 NZ_PYJW01000055.1 Protein Homology CDS 82549 83307 . + 0 ID=cds-WP_023993872.1;Parent=gene-C9E95_RS04870;Dbxref=GenBank:WP_023993872.1;Name=WP_023993872.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462385.1;locus_tag=C9E95_RS04870;product=phosphoglycolate phosphatase;protein_id=WP_023993872.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 83300 84304 . + . ID=gene-C9E95_RS04875;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=C9E95_RS04875;old_locus_tag=C9E95_04995 NZ_PYJW01000055.1 Protein Homology CDS 83300 84304 . + 0 ID=cds-WP_000165562.1;Parent=gene-C9E95_RS04875;Dbxref=GenBank:WP_000165562.1;Name=WP_000165562.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462384.1;locus_tag=C9E95_RS04875;product=tryptophan--tRNA ligase;protein_id=WP_000165562.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 84449 84619 . - . ID=gene-C9E95_RS04880;Name=C9E95_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E95_RS04880;old_locus_tag=C9E95_05000 NZ_PYJW01000055.1 Protein Homology CDS 84449 84619 . - 0 ID=cds-WP_000472323.1;Parent=gene-C9E95_RS04880;Dbxref=GenBank:WP_000472323.1;Name=WP_000472323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462383.1;locus_tag=C9E95_RS04880;product=YhfL family protein;protein_id=WP_000472323.1;transl_table=11 NZ_PYJW01000055.1 RefSeq gene 84812 90060 . - . ID=gene-C9E95_RS04885;Name=bigA;end_range=90060,.;gbkey=Gene;gene=bigA;gene_biotype=protein_coding;locus_tag=C9E95_RS04885;old_locus_tag=C9E95_05005;partial=true NZ_PYJW01000055.1 Protein Homology CDS 84812 90060 . - 2 ID=cds-WP_135369822.1;Parent=gene-C9E95_RS04885;Dbxref=GenBank:WP_135369822.1;Name=WP_135369822.1;end_range=90060,.;gbkey=CDS;gene=bigA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462381.1;locus_tag=C9E95_RS04885;partial=true;product=autotransporter adhesin BigA;protein_id=WP_135369822.1;transl_table=11 ###