##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM474496v1
#!genome-build-accession NCBI_Assembly:GCF_004744965.1
#!annotation-date 06/11/2025 09:15:29
#!annotation-source NCBI RefSeq GCF_004744965.1-RS_2025_06_11
##sequence-region NZ_PYKA01000068.1 1 3812
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000068.1	RefSeq	region	1	3812	.	+	.	ID=NZ_PYKA01000068.1:1..3812;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000068.1	RefSeq	gene	92	751	.	-	.	ID=gene-C9E97_RS10290;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=C9E97_RS10290;old_locus_tag=C9E97_10510
NZ_PYKA01000068.1	Protein Homology	CDS	92	751	.	-	0	ID=cds-WP_000250289.1;Parent=gene-C9E97_RS10290;Dbxref=GenBank:WP_000250289.1;Name=WP_000250289.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461965.1;locus_tag=C9E97_RS10290;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_000250289.1;transl_table=11
NZ_PYKA01000068.1	RefSeq	gene	915	1226	.	-	.	ID=gene-C9E97_RS10295;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=C9E97_RS10295;old_locus_tag=C9E97_10515
NZ_PYKA01000068.1	Protein Homology	CDS	915	1226	.	-	0	ID=cds-WP_001182976.1;Parent=gene-C9E97_RS10295;Dbxref=GenBank:WP_001182976.1;Name=WP_001182976.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461966.1;locus_tag=C9E97_RS10295;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_001182976.1;transl_table=11
NZ_PYKA01000068.1	RefSeq	gene	1384	2817	.	+	.	ID=gene-C9E97_RS10300;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=C9E97_RS10300;old_locus_tag=C9E97_10520
NZ_PYKA01000068.1	Protein Homology	CDS	1384	2817	.	+	0	ID=cds-WP_135369165.1;Parent=gene-C9E97_RS10300;Dbxref=GenBank:WP_135369165.1;Name=WP_135369165.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461967.1;locus_tag=C9E97_RS10300;product=6-phospho-beta-glucosidase BglA;protein_id=WP_135369165.1;transl_table=11
NZ_PYKA01000068.1	RefSeq	gene	2865	3758	.	-	.	ID=gene-C9E97_RS10305;Name=C9E97_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10305;old_locus_tag=C9E97_10525
NZ_PYKA01000068.1	Protein Homology	CDS	2865	3758	.	-	0	ID=cds-WP_079840015.1;Parent=gene-C9E97_RS10305;Dbxref=GenBank:WP_079840015.1;Name=WP_079840015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461968.1;locus_tag=C9E97_RS10305;product=transporter;protein_id=WP_079840015.1;transl_table=11
##sequence-region NZ_PYKA01000038.1 1 3439
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000038.1	RefSeq	region	1	3439	.	+	.	ID=NZ_PYKA01000038.1:1..3439;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000038.1	RefSeq	gene	147	3439	.	+	.	ID=gene-C9E97_RS04950;Name=C9E97_RS04950;end_range=3439,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04950;old_locus_tag=C9E97_05080;partial=true
NZ_PYKA01000038.1	Protein Homology	CDS	147	3439	.	+	0	ID=cds-WP_210115372.1;Parent=gene-C9E97_RS04950;Dbxref=GenBank:WP_210115372.1;Name=WP_210115372.1;end_range=3439,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044774.1;locus_tag=C9E97_RS04950;partial=true;product=autotransporter-associated beta strand repeat-containing protein;protein_id=WP_210115372.1;transl_table=11
##sequence-region NZ_PYKA01000062.1 1 3241
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000062.1	RefSeq	region	1	3241	.	+	.	ID=NZ_PYKA01000062.1:1..3241;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000062.1	RefSeq	gene	1	1621	.	-	.	ID=gene-C9E97_RS09310;Name=C9E97_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09310;old_locus_tag=C9E97_09505;partial=true;start_range=.,1
NZ_PYKA01000062.1	Protein Homology	CDS	1	1621	.	-	0	ID=cds-WP_135495716.1;Parent=gene-C9E97_RS09310;Dbxref=GenBank:WP_135495716.1;Name=WP_135495716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459709.1;locus_tag=C9E97_RS09310;partial=true;product=glycosyltransferase;protein_id=WP_135495716.1;start_range=.,1;transl_table=11
NZ_PYKA01000062.1	RefSeq	gene	1715	2425	.	-	.	ID=gene-C9E97_RS09315;Name=C9E97_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09315;old_locus_tag=C9E97_09510
NZ_PYKA01000062.1	Protein Homology	CDS	1715	2425	.	-	0	ID=cds-WP_000702849.1;Parent=gene-C9E97_RS09315;Dbxref=GenBank:WP_000702849.1;Name=WP_000702849.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459708.1;locus_tag=C9E97_RS09315;product=ABC transporter ATP-binding protein;protein_id=WP_000702849.1;transl_table=11
NZ_PYKA01000062.1	RefSeq	gene	2429	3199	.	-	.	ID=gene-C9E97_RS09320;Name=C9E97_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09320;old_locus_tag=C9E97_09515
NZ_PYKA01000062.1	Protein Homology	CDS	2429	3199	.	-	0	ID=cds-WP_000998823.1;Parent=gene-C9E97_RS09320;Dbxref=GenBank:WP_000998823.1;Name=WP_000998823.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459707.1;locus_tag=C9E97_RS09320;product=ABC transporter permease;protein_id=WP_000998823.1;transl_table=11
##sequence-region NZ_PYKA01000077.1 1 2956
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000077.1	RefSeq	region	1	2956	.	+	.	ID=NZ_PYKA01000077.1:1..2956;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000077.1	RefSeq	gene	99	174	.	-	.	ID=gene-C9E97_RS10900;Name=C9E97_RS10900;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS10900;old_locus_tag=C9E97_11150
NZ_PYKA01000077.1	tRNAscan-SE	tRNA	99	174	.	-	.	ID=rna-C9E97_RS10900;Parent=gene-C9E97_RS10900;anticodon=(pos:complement(139..141));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS10900;product=tRNA-Val
NZ_PYKA01000077.1	tRNAscan-SE	exon	99	174	.	-	.	ID=exon-C9E97_RS10900-1;Parent=rna-C9E97_RS10900;anticodon=(pos:complement(139..141));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS10900;product=tRNA-Val
NZ_PYKA01000077.1	RefSeq	gene	433	1848	.	+	.	ID=gene-C9E97_RS10905;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=C9E97_RS10905;old_locus_tag=C9E97_11155
NZ_PYKA01000077.1	Protein Homology	CDS	433	1848	.	+	0	ID=cds-WP_000695623.1;Parent=gene-C9E97_RS10905;Dbxref=GenBank:WP_000695623.1;Name=WP_000695623.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461354.1;locus_tag=C9E97_RS10905;product=glutamate--tRNA ligase;protein_id=WP_000695623.1;transl_table=11
NZ_PYKA01000077.1	RefSeq	gene	1902	2294	.	-	.	ID=gene-C9E97_RS10910;Name=C9E97_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10910;old_locus_tag=C9E97_11160
NZ_PYKA01000077.1	Protein Homology	CDS	1902	2294	.	-	0	ID=cds-WP_000826515.1;Parent=gene-C9E97_RS10910;Dbxref=GenBank:WP_000826515.1;Name=WP_000826515.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461353.1;locus_tag=C9E97_RS10910;product=MerR family transcriptional regulator;protein_id=WP_000826515.1;transl_table=11
NZ_PYKA01000077.1	RefSeq	gene	2296	2658	.	-	.	ID=gene-C9E97_RS10915;Name=C9E97_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10915;old_locus_tag=C9E97_11165
NZ_PYKA01000077.1	Protein Homology	CDS	2296	2658	.	-	0	ID=cds-WP_000472034.1;Parent=gene-C9E97_RS10915;Dbxref=GenBank:WP_000472034.1;Name=WP_000472034.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461352.1;locus_tag=C9E97_RS10915;product=MerR family transcriptional regulator;protein_id=WP_000472034.1;transl_table=11
NZ_PYKA01000077.1	RefSeq	gene	2880	2955	.	+	.	ID=gene-C9E97_RS10920;Name=C9E97_RS10920;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS10920;old_locus_tag=C9E97_11175
NZ_PYKA01000077.1	tRNAscan-SE	tRNA	2880	2955	.	+	.	ID=rna-C9E97_RS10920;Parent=gene-C9E97_RS10920;anticodon=(pos:2913..2915);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS10920;product=tRNA-Ala
NZ_PYKA01000077.1	tRNAscan-SE	exon	2880	2955	.	+	.	ID=exon-C9E97_RS10920-1;Parent=rna-C9E97_RS10920;anticodon=(pos:2913..2915);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS10920;product=tRNA-Ala
##sequence-region NZ_PYKA01000067.1 1 2595
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000067.1	RefSeq	region	1	2595	.	+	.	ID=NZ_PYKA01000067.1:1..2595;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000067.1	RefSeq	gene	1	116	.	+	.	ID=gene-C9E97_RS10270;Name=C9E97_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10270;old_locus_tag=C9E97_10490;partial=true;start_range=.,1
NZ_PYKA01000067.1	Protein Homology	CDS	1	116	.	+	2	ID=cds-WP_167850514.1;Parent=gene-C9E97_RS10270;Dbxref=GenBank:WP_167850514.1;Name=WP_167850514.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543393.1;locus_tag=C9E97_RS10270;partial=true;product=integrase core domain-containing protein;protein_id=WP_167850514.1;start_range=.,1;transl_table=11
NZ_PYKA01000067.1	RefSeq	gene	695	907	.	+	.	ID=gene-C9E97_RS10275;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=C9E97_RS10275;old_locus_tag=C9E97_10495
NZ_PYKA01000067.1	Protein Homology	CDS	695	907	.	+	0	ID=cds-WP_000208509.1;Parent=gene-C9E97_RS10275;Dbxref=GenBank:WP_000208509.1;Name=WP_000208509.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460947.1;locus_tag=C9E97_RS10275;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000208509.1;transl_table=11
NZ_PYKA01000067.1	RefSeq	gene	918	1106	.	+	.	ID=gene-C9E97_RS10280;Name=C9E97_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10280;old_locus_tag=C9E97_10500
NZ_PYKA01000067.1	Protein Homology	CDS	918	1106	.	+	0	ID=cds-WP_024131109.1;Parent=gene-C9E97_RS10280;Dbxref=GenBank:WP_024131109.1;Name=WP_024131109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=C9E97_RS10280;product=hypothetical protein;protein_id=WP_024131109.1;transl_table=11
NZ_PYKA01000067.1	RefSeq	gene	1364	2560	.	-	.	ID=gene-C9E97_RS10285;Name=ompS1;gbkey=Gene;gene=ompS1;gene_biotype=protein_coding;locus_tag=C9E97_RS10285;old_locus_tag=C9E97_10505
NZ_PYKA01000067.1	Protein Homology	CDS	1364	2560	.	-	0	ID=cds-WP_001080660.1;Parent=gene-C9E97_RS10285;Dbxref=GenBank:WP_001080660.1;Name=WP_001080660.1;gbkey=CDS;gene=ompS1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460946.1;locus_tag=C9E97_RS10285;product=porin OmpS1;protein_id=WP_001080660.1;transl_table=11
##sequence-region NZ_PYKA01000064.1 1 2540
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000064.1	RefSeq	region	1	2540	.	+	.	ID=NZ_PYKA01000064.1:1..2540;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000064.1	RefSeq	gene	1	2317	.	-	.	ID=gene-C9E97_RS09515;Name=C9E97_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09515;old_locus_tag=C9E97_09715;partial=true;start_range=.,1
NZ_PYKA01000064.1	Protein Homology	CDS	1	2317	.	-	0	ID=cds-WP_167850513.1;Parent=gene-C9E97_RS09515;Dbxref=GenBank:WP_167850513.1;Name=WP_167850513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835909.1;locus_tag=C9E97_RS09515;partial=true;product=autotransporter-associated beta strand repeat-containing protein;protein_id=WP_167850513.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKA01000130.1 1 2461
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000130.1	RefSeq	region	1	2461	.	+	.	ID=NZ_PYKA01000130.1:1..2461;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000130.1	RefSeq	gene	1	2461	.	-	.	ID=gene-C9E97_RS21140;Name=adhE;end_range=2461,.;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=C9E97_RS21140;old_locus_tag=C9E97_21635;partial=true;start_range=.,1
NZ_PYKA01000130.1	Protein Homology	CDS	1	2461	.	-	2	ID=cds-WP_135369212.1;Parent=gene-C9E97_RS21140;Dbxref=GenBank:WP_135369212.1;Name=WP_135369212.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;end_range=2461,.;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=C9E97_RS21140;partial=true;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_135369212.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKA01000050.1 1 2310
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000050.1	RefSeq	region	1	2310	.	+	.	ID=NZ_PYKA01000050.1:1..2310;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000050.1	RefSeq	gene	1	2310	.	+	.	ID=gene-C9E97_RS07080;Name=C9E97_RS07080;end_range=2310,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07080;old_locus_tag=C9E97_07255;partial=true;start_range=.,1
NZ_PYKA01000050.1	Protein Homology	CDS	1	2310	.	+	2	ID=cds-WP_210115373.1;Parent=gene-C9E97_RS07080;Dbxref=GenBank:WP_210115373.1;Name=WP_210115373.1;end_range=2310,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044775.1;locus_tag=C9E97_RS07080;partial=true;product=autotransporter-associated beta strand repeat-containing protein;protein_id=WP_210115373.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKA01000100.1 1 2201
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000100.1	RefSeq	region	1	2201	.	+	.	ID=NZ_PYKA01000100.1:1..2201;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000100.1	RefSeq	pseudogene	266	484	.	+	.	ID=gene-C9E97_RS13855;Name=C9E97_RS13855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS13855;old_locus_tag=C9E97_14155;partial=true;pseudo=true;start_range=.,266
NZ_PYKA01000100.1	Protein Homology	CDS	266	484	.	+	0	ID=cds-C9E97_RS13855;Parent=gene-C9E97_RS13855;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1;locus_tag=C9E97_RS13855;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,266;transl_table=11
NZ_PYKA01000100.1	RefSeq	gene	557	1084	.	-	.	ID=gene-C9E97_RS13860;Name=C9E97_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13860;old_locus_tag=C9E97_14160
NZ_PYKA01000100.1	Protein Homology	CDS	557	1084	.	-	0	ID=cds-WP_000971655.1;Parent=gene-C9E97_RS13860;Dbxref=GenBank:WP_000971655.1;Name=WP_000971655.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461826.1;locus_tag=C9E97_RS13860;product=GNAT family N-acetyltransferase;protein_id=WP_000971655.1;transl_table=11
NZ_PYKA01000100.1	RefSeq	gene	1081	1371	.	-	.	ID=gene-C9E97_RS13865;Name=C9E97_RS13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13865;old_locus_tag=C9E97_14165
NZ_PYKA01000100.1	Protein Homology	CDS	1081	1371	.	-	0	ID=cds-WP_000855694.1;Parent=gene-C9E97_RS13865;Dbxref=GenBank:WP_000855694.1;Name=WP_000855694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461825.1;locus_tag=C9E97_RS13865;product=DUF1778 domain-containing protein;protein_id=WP_000855694.1;transl_table=11
NZ_PYKA01000100.1	RefSeq	pseudogene	1641	1830	.	-	.	ID=gene-C9E97_RS13870;Name=C9E97_RS13870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS13870;old_locus_tag=C9E97_14170;partial=true;pseudo=true;start_range=.,1641
NZ_PYKA01000100.1	Protein Homology	CDS	1641	1830	.	-	0	ID=cds-C9E97_RS13870;Parent=gene-C9E97_RS13870;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=C9E97_RS13870;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1641;transl_table=11
NZ_PYKA01000100.1	RefSeq	pseudogene	2071	2201	.	+	.	ID=gene-C9E97_RS23810;Name=C9E97_RS23810;end_range=2201,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23810;partial=true;pseudo=true
NZ_PYKA01000100.1	Protein Homology	CDS	2071	2201	.	+	0	ID=cds-C9E97_RS23810;Parent=gene-C9E97_RS23810;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2201,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461824.1;locus_tag=C9E97_RS23810;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKA01000124.1 1 99893
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000124.1	RefSeq	region	1	99893	.	+	.	ID=NZ_PYKA01000124.1:1..99893;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000124.1	RefSeq	gene	1	320	.	+	.	ID=gene-C9E97_RS19900;Name=C9E97_RS19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19900;old_locus_tag=C9E97_20370;partial=true;start_range=.,1
NZ_PYKA01000124.1	Protein Homology	CDS	1	320	.	+	2	ID=cds-WP_072210623.1;Parent=gene-C9E97_RS19900;Dbxref=GenBank:WP_072210623.1;Name=WP_072210623.1;Ontology_term=GO:0006814,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=C9E97_RS19900;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_072210623.1;start_range=.,1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	455	2074	.	+	.	ID=gene-C9E97_RS19905;Name=citA;gbkey=Gene;gene=citA;gene_biotype=protein_coding;locus_tag=C9E97_RS19905;old_locus_tag=C9E97_20375
NZ_PYKA01000124.1	Protein Homology	CDS	455	2074	.	+	0	ID=cds-WP_023194337.1;Parent=gene-C9E97_RS19905;Dbxref=GenBank:WP_023194337.1;Name=WP_023194337.1;gbkey=CDS;gene=citA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459058.1;locus_tag=C9E97_RS19905;product=citrate sensor histidine kinase CitA;protein_id=WP_023194337.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	2076	2762	.	+	.	ID=gene-C9E97_RS19910;Name=citB;gbkey=Gene;gene=citB;gene_biotype=protein_coding;locus_tag=C9E97_RS19910;old_locus_tag=C9E97_20380
NZ_PYKA01000124.1	Protein Homology	CDS	2076	2762	.	+	0	ID=cds-WP_000377406.1;Parent=gene-C9E97_RS19910;Dbxref=GenBank:WP_000377406.1;Name=WP_000377406.1;gbkey=CDS;gene=citB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459057.1;locus_tag=C9E97_RS19910;product=citrate response regulator transcription factor CitB;protein_id=WP_000377406.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	2784	3704	.	-	.	ID=gene-C9E97_RS19915;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=C9E97_RS19915;old_locus_tag=C9E97_20385
NZ_PYKA01000124.1	Protein Homology	CDS	2784	3704	.	-	0	ID=cds-WP_023257308.1;Parent=gene-C9E97_RS19915;Dbxref=GenBank:WP_023257308.1;Name=WP_023257308.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459056.1;locus_tag=C9E97_RS19915;product=ribonucleoside hydrolase RihC;protein_id=WP_023257308.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	3720	4922	.	-	.	ID=gene-C9E97_RS19920;Name=C9E97_RS19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19920;old_locus_tag=C9E97_20390
NZ_PYKA01000124.1	Protein Homology	CDS	3720	4922	.	-	0	ID=cds-WP_135369522.1;Parent=gene-C9E97_RS19920;Dbxref=GenBank:WP_135369522.1;Name=WP_135369522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459055.1;locus_tag=C9E97_RS19920;product=XAC2610-related protein;protein_id=WP_135369522.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	5122	6072	.	-	.	ID=gene-C9E97_RS19925;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=C9E97_RS19925;old_locus_tag=C9E97_20395
NZ_PYKA01000124.1	Protein Homology	CDS	5122	6072	.	-	0	ID=cds-WP_001166422.1;Parent=gene-C9E97_RS19925;Dbxref=GenBank:WP_001166422.1;Name=WP_001166422.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=C9E97_RS19925;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166422.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	6075	6524	.	-	.	ID=gene-C9E97_RS19930;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=C9E97_RS19930;old_locus_tag=C9E97_20400
NZ_PYKA01000124.1	Protein Homology	CDS	6075	6524	.	-	0	ID=cds-WP_000047269.1;Parent=gene-C9E97_RS19930;Dbxref=GenBank:WP_000047269.1;Name=WP_000047269.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459053.1;locus_tag=C9E97_RS19930;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000047269.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	6679	7179	.	-	.	ID=gene-C9E97_RS19935;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=C9E97_RS19935;old_locus_tag=C9E97_20405
NZ_PYKA01000124.1	Protein Homology	CDS	6679	7179	.	-	0	ID=cds-WP_000042739.1;Parent=gene-C9E97_RS19935;Dbxref=GenBank:WP_000042739.1;Name=WP_000042739.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459052.1;locus_tag=C9E97_RS19935;product=signal peptidase II;protein_id=WP_000042739.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	7179	10013	.	-	.	ID=gene-C9E97_RS19940;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=C9E97_RS19940;old_locus_tag=C9E97_20410
NZ_PYKA01000124.1	Protein Homology	CDS	7179	10013	.	-	0	ID=cds-WP_001674865.1;Parent=gene-C9E97_RS19940;Dbxref=GenBank:WP_001674865.1;Name=WP_001674865.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459051.1;locus_tag=C9E97_RS19940;product=isoleucine--tRNA ligase;protein_id=WP_001674865.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	10058	10996	.	-	.	ID=gene-C9E97_RS19945;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=C9E97_RS19945;old_locus_tag=C9E97_20415
NZ_PYKA01000124.1	Protein Homology	CDS	10058	10996	.	-	0	ID=cds-WP_000767311.1;Parent=gene-C9E97_RS19945;Dbxref=GenBank:WP_000767311.1;Name=WP_000767311.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459050.1;locus_tag=C9E97_RS19945;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000767311.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	11004	11219	.	-	.	ID=gene-C9E97_RS19950;Name=C9E97_RS19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19950;old_locus_tag=C9E97_20420
NZ_PYKA01000124.1	Protein Homology	CDS	11004	11219	.	-	0	ID=cds-WP_001575565.1;Parent=gene-C9E97_RS19950;Dbxref=GenBank:WP_001575565.1;Name=WP_001575565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459049.1;locus_tag=C9E97_RS19950;product=YaaY family protein;protein_id=WP_001575565.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	11325	11588	.	+	.	ID=gene-C9E97_RS19955;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=C9E97_RS19955;old_locus_tag=C9E97_20425
NZ_PYKA01000124.1	Protein Homology	CDS	11325	11588	.	+	0	ID=cds-WP_001518655.1;Parent=gene-C9E97_RS19955;Dbxref=GenBank:WP_001518655.1;Name=WP_001518655.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=C9E97_RS19955;product=30S ribosomal protein S20;protein_id=WP_001518655.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	12044	13417	.	+	.	ID=gene-C9E97_RS19960;Name=C9E97_RS19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19960;old_locus_tag=C9E97_20430
NZ_PYKA01000124.1	Protein Homology	CDS	12044	13417	.	+	0	ID=cds-WP_000099989.1;Parent=gene-C9E97_RS19960;Dbxref=GenBank:WP_000099989.1;Name=WP_000099989.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459047.1;locus_tag=C9E97_RS19960;product=MFS transporter;protein_id=WP_000099989.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	13457	15496	.	+	.	ID=gene-C9E97_RS19965;Name=C9E97_RS19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19965;old_locus_tag=C9E97_20435
NZ_PYKA01000124.1	Protein Homology	CDS	13457	15496	.	+	0	ID=cds-WP_135369521.1;Parent=gene-C9E97_RS19965;Dbxref=GenBank:WP_135369521.1;Name=WP_135369521.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459046.1;locus_tag=C9E97_RS19965;product=glycoside hydrolase family 31 protein;protein_id=WP_135369521.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	15551	16450	.	-	.	ID=gene-C9E97_RS19970;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=C9E97_RS19970;old_locus_tag=C9E97_20440
NZ_PYKA01000124.1	Protein Homology	CDS	15551	16450	.	-	0	ID=cds-WP_000062872.1;Parent=gene-C9E97_RS19970;Dbxref=GenBank:WP_000062872.1;Name=WP_000062872.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459045.1;locus_tag=C9E97_RS19970;product=transcriptional activator NhaR;protein_id=WP_000062872.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	16512	17678	.	-	.	ID=gene-C9E97_RS19975;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=C9E97_RS19975;old_locus_tag=C9E97_20445
NZ_PYKA01000124.1	Protein Homology	CDS	16512	17678	.	-	0	ID=cds-WP_000681340.1;Parent=gene-C9E97_RS19975;Dbxref=GenBank:WP_000681340.1;Name=WP_000681340.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459044.1;locus_tag=C9E97_RS19975;product=Na+/H+ antiporter NhaA;protein_id=WP_000681340.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	pseudogene	17841	18068	.	-	.	ID=gene-C9E97_RS19980;Name=C9E97_RS19980;end_range=18068,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS19980;old_locus_tag=C9E97_20450;partial=true;pseudo=true
NZ_PYKA01000124.1	Protein Homology	CDS	17841	18068	.	-	0	ID=cds-C9E97_RS19980;Parent=gene-C9E97_RS19980;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=18068,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459043.1;locus_tag=C9E97_RS19980;partial=true;product=aryl-sulfate sulfotransferase;pseudo=true;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	17990	18247	.	-	.	ID=gene-C9E97_RS19985;Name=C9E97_RS19985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19985;old_locus_tag=C9E97_20455
NZ_PYKA01000124.1	Protein Homology	CDS	17990	18247	.	-	0	ID=cds-WP_135369520.1;Parent=gene-C9E97_RS19985;Dbxref=GenBank:WP_135369520.1;Name=WP_135369520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528979.1;locus_tag=C9E97_RS19985;product=aryl sulfotransferase;protein_id=WP_135369520.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	18366	19619	.	-	.	ID=gene-C9E97_RS19990;Name=C9E97_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19990;old_locus_tag=C9E97_20460
NZ_PYKA01000124.1	Protein Homology	CDS	18366	19619	.	-	0	ID=cds-WP_000457885.1;Parent=gene-C9E97_RS19990;Dbxref=GenBank:WP_000457885.1;Name=WP_000457885.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457886.1;locus_tag=C9E97_RS19990;product=IS1/IS1595 family N-terminal zinc-binding domain-containing protein;protein_id=WP_000457885.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	19637	20833	.	-	.	ID=gene-C9E97_RS19995;Name=C9E97_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19995;old_locus_tag=C9E97_20465
NZ_PYKA01000124.1	Protein Homology	CDS	19637	20833	.	-	0	ID=cds-WP_001189145.1;Parent=gene-C9E97_RS19995;Dbxref=GenBank:WP_001189145.1;Name=WP_001189145.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519625.1;locus_tag=C9E97_RS19995;product=anaerobic sulfatase maturase;protein_id=WP_001189145.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	20937	22430	.	-	.	ID=gene-C9E97_RS20000;Name=C9E97_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20000;old_locus_tag=C9E97_20470
NZ_PYKA01000124.1	Protein Homology	CDS	20937	22430	.	-	0	ID=cds-WP_000754366.1;Parent=gene-C9E97_RS20000;Dbxref=GenBank:WP_000754366.1;Name=WP_000754366.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459040.1;locus_tag=C9E97_RS20000;product=sulfatase family protein;protein_id=WP_000754366.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	22451	23215	.	-	.	ID=gene-C9E97_RS20005;Name=C9E97_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20005;old_locus_tag=C9E97_20475
NZ_PYKA01000124.1	Protein Homology	CDS	22451	23215	.	-	0	ID=cds-WP_000052612.1;Parent=gene-C9E97_RS20005;Dbxref=GenBank:WP_000052612.1;Name=WP_000052612.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052612.1;locus_tag=C9E97_RS20005;product=outer membrane protein OmpK;protein_id=WP_000052612.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	pseudogene	23656	24052	.	+	.	ID=gene-C9E97_RS24010;Name=C9E97_RS24010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS24010;old_locus_tag=C9E97_20480;partial=true;pseudo=true;start_range=.,23656
NZ_PYKA01000124.1	Protein Homology	CDS	23656	24052	.	+	0	ID=cds-C9E97_RS24010;Parent=gene-C9E97_RS24010;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009166,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015633260.1;locus_tag=C9E97_RS24010;partial=true;product=5'-nucleotidase C-terminal domain-containing protein;pseudo=true;start_range=.,23656;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	24190	24381	.	-	.	ID=gene-C9E97_RS20015;Name=C9E97_RS20015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20015;old_locus_tag=C9E97_20485
NZ_PYKA01000124.1	GeneMarkS-2+	CDS	24190	24381	.	-	0	ID=cds-WP_012218477.1;Parent=gene-C9E97_RS20015;Dbxref=GenBank:WP_012218477.1;Name=WP_012218477.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E97_RS20015;product=hypothetical protein;protein_id=WP_012218477.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	25129	25578	.	+	.	ID=gene-C9E97_RS20020;Name=C9E97_RS20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20020;old_locus_tag=C9E97_20490
NZ_PYKA01000124.1	Protein Homology	CDS	25129	25578	.	+	0	ID=cds-WP_135369545.1;Parent=gene-C9E97_RS20020;Dbxref=GenBank:WP_135369545.1;Name=WP_135369545.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459034.1;locus_tag=C9E97_RS20020;product=winged helix-turn-helix domain-containing protein;protein_id=WP_135369545.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	25678	25965	.	-	.	ID=gene-C9E97_RS20025;Name=C9E97_RS20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20025;old_locus_tag=C9E97_20495
NZ_PYKA01000124.1	Protein Homology	CDS	25678	25965	.	-	0	ID=cds-WP_000839831.1;Parent=gene-C9E97_RS20025;Dbxref=GenBank:WP_000839831.1;Name=WP_000839831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000839835.1;locus_tag=C9E97_RS20025;product=hypothetical protein;protein_id=WP_000839831.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	26004	26849	.	-	.	ID=gene-C9E97_RS20030;Name=C9E97_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20030;old_locus_tag=C9E97_20500
NZ_PYKA01000124.1	Protein Homology	CDS	26004	26849	.	-	0	ID=cds-WP_000291393.1;Parent=gene-C9E97_RS20030;Dbxref=GenBank:WP_000291393.1;Name=WP_000291393.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459033.1;locus_tag=C9E97_RS20030;product=DsbA family protein;protein_id=WP_000291393.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	26914	27645	.	-	.	ID=gene-C9E97_RS20035;Name=bcfG;gbkey=Gene;gene=bcfG;gene_biotype=protein_coding;locus_tag=C9E97_RS20035;old_locus_tag=C9E97_20505
NZ_PYKA01000124.1	Protein Homology	CDS	26914	27645	.	-	0	ID=cds-WP_135369546.1;Parent=gene-C9E97_RS20035;Dbxref=GenBank:WP_135369546.1;Name=WP_135369546.1;gbkey=CDS;gene=bcfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459032.1;locus_tag=C9E97_RS20035;product=fimbrial chaperone BcfG;protein_id=WP_135369546.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	27611	28129	.	-	.	ID=gene-C9E97_RS20040;Name=C9E97_RS20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20040;old_locus_tag=C9E97_20510
NZ_PYKA01000124.1	Protein Homology	CDS	27611	28129	.	-	0	ID=cds-WP_001243232.1;Parent=gene-C9E97_RS20040;Dbxref=GenBank:WP_001243232.1;Name=WP_001243232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459031.1;locus_tag=C9E97_RS20040;product=fimbrial protein BcfF;protein_id=WP_001243232.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	28145	28690	.	-	.	ID=gene-C9E97_RS20045;Name=C9E97_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20045;old_locus_tag=C9E97_20515
NZ_PYKA01000124.1	Protein Homology	CDS	28145	28690	.	-	0	ID=cds-WP_001082038.1;Parent=gene-C9E97_RS20045;Dbxref=GenBank:WP_001082038.1;Name=WP_001082038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459030.1;locus_tag=C9E97_RS20045;product=fimbrial protein BcfE;protein_id=WP_001082038.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	28691	29698	.	-	.	ID=gene-C9E97_RS20050;Name=C9E97_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20050;old_locus_tag=C9E97_20520
NZ_PYKA01000124.1	Protein Homology	CDS	28691	29698	.	-	0	ID=cds-WP_000701245.1;Parent=gene-C9E97_RS20050;Dbxref=GenBank:WP_000701245.1;Name=WP_000701245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459029.1;locus_tag=C9E97_RS20050;product=fimbrial protein BcfD;protein_id=WP_000701245.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	29699	32320	.	-	.	ID=gene-C9E97_RS20055;Name=bcfC;gbkey=Gene;gene=bcfC;gene_biotype=protein_coding;locus_tag=C9E97_RS20055;old_locus_tag=C9E97_20525
NZ_PYKA01000124.1	Protein Homology	CDS	29699	32320	.	-	0	ID=cds-WP_001245865.1;Parent=gene-C9E97_RS20055;Dbxref=GenBank:WP_001245865.1;Name=WP_001245865.1;gbkey=CDS;gene=bcfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459028.1;locus_tag=C9E97_RS20055;product=fimbrial usher BcfC;protein_id=WP_001245865.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	32325	33011	.	-	.	ID=gene-C9E97_RS20060;Name=bcfB;gbkey=Gene;gene=bcfB;gene_biotype=protein_coding;locus_tag=C9E97_RS20060;old_locus_tag=C9E97_20530
NZ_PYKA01000124.1	Protein Homology	CDS	32325	33011	.	-	0	ID=cds-WP_000742551.1;Parent=gene-C9E97_RS20060;Dbxref=GenBank:WP_000742551.1;Name=WP_000742551.1;gbkey=CDS;gene=bcfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459027.1;locus_tag=C9E97_RS20060;product=fimbrial biogenesis chaperone BcfB;protein_id=WP_000742551.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	33112	33654	.	-	.	ID=gene-C9E97_RS20065;Name=C9E97_RS20065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20065;old_locus_tag=C9E97_20535
NZ_PYKA01000124.1	Protein Homology	CDS	33112	33654	.	-	0	ID=cds-WP_000743357.1;Parent=gene-C9E97_RS20065;Dbxref=GenBank:WP_000743357.1;Name=WP_000743357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459026.1;locus_tag=C9E97_RS20065;product=fimbrial protein BcfA;protein_id=WP_000743357.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	34084	34788	.	-	.	ID=gene-C9E97_RS20070;Name=C9E97_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20070;old_locus_tag=C9E97_20540
NZ_PYKA01000124.1	Protein Homology	CDS	34084	34788	.	-	0	ID=cds-WP_023242936.1;Parent=gene-C9E97_RS20070;Dbxref=GenBank:WP_023242936.1;Name=WP_023242936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459025.1;locus_tag=C9E97_RS20070;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_023242936.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	35069	38065	.	-	.	ID=gene-C9E97_RS20075;Name=C9E97_RS20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20075;old_locus_tag=C9E97_20545
NZ_PYKA01000124.1	Protein Homology	CDS	35069	38065	.	-	0	ID=cds-WP_050068122.1;Parent=gene-C9E97_RS20075;Dbxref=GenBank:WP_050068122.1;Name=WP_050068122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459024.1;locus_tag=C9E97_RS20075;product=hypothetical protein;protein_id=WP_050068122.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	38158	40257	.	-	.	ID=gene-C9E97_RS20080;Name=C9E97_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20080;old_locus_tag=C9E97_20550
NZ_PYKA01000124.1	Protein Homology	CDS	38158	40257	.	-	0	ID=cds-WP_135369547.1;Parent=gene-C9E97_RS20080;Dbxref=GenBank:WP_135369547.1;Name=WP_135369547.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459023.1;locus_tag=C9E97_RS20080;product=glycosyl hydrolase family 18 protein;protein_id=WP_135369547.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	40638	41081	.	+	.	ID=gene-C9E97_RS20085;Name=C9E97_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20085;old_locus_tag=C9E97_20555
NZ_PYKA01000124.1	Protein Homology	CDS	40638	41081	.	+	0	ID=cds-WP_000860681.1;Parent=gene-C9E97_RS20085;Dbxref=GenBank:WP_000860681.1;Name=WP_000860681.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459022.1;locus_tag=C9E97_RS20085;product=winged helix-turn-helix domain-containing protein;protein_id=WP_000860681.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	41098	41631	.	+	.	ID=gene-C9E97_RS20090;Name=C9E97_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20090;old_locus_tag=C9E97_20560
NZ_PYKA01000124.1	Protein Homology	CDS	41098	41631	.	+	0	ID=cds-WP_001068132.1;Parent=gene-C9E97_RS20090;Dbxref=GenBank:WP_001068132.1;Name=WP_001068132.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459021.1;locus_tag=C9E97_RS20090;product=glycoside hydrolase family 108 protein;protein_id=WP_001068132.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	41692	42036	.	-	.	ID=gene-C9E97_RS20095;Name=C9E97_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20095;old_locus_tag=C9E97_20565
NZ_PYKA01000124.1	Protein Homology	CDS	41692	42036	.	-	0	ID=cds-WP_000026889.1;Parent=gene-C9E97_RS20095;Dbxref=GenBank:WP_000026889.1;Name=WP_000026889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459020.1;locus_tag=C9E97_RS20095;product=phage holin family protein;protein_id=WP_000026889.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	42163	43110	.	-	.	ID=gene-C9E97_RS20100;Name=C9E97_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20100;old_locus_tag=C9E97_20570
NZ_PYKA01000124.1	Protein Homology	CDS	42163	43110	.	-	0	ID=cds-WP_000534907.1;Parent=gene-C9E97_RS20100;Dbxref=GenBank:WP_000534907.1;Name=WP_000534907.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459019.1;locus_tag=C9E97_RS20100;product=LysR family transcriptional regulator;protein_id=WP_000534907.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	43390	44529	.	-	.	ID=gene-C9E97_RS20105;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=C9E97_RS20105;old_locus_tag=C9E97_20575
NZ_PYKA01000124.1	Protein Homology	CDS	43390	44529	.	-	0	ID=cds-WP_001119009.1;Parent=gene-C9E97_RS20105;Dbxref=GenBank:WP_001119009.1;Name=WP_001119009.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459018.1;locus_tag=C9E97_RS20105;product=molecular chaperone DnaJ;protein_id=WP_001119009.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	44615	46531	.	-	.	ID=gene-C9E97_RS20110;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=C9E97_RS20110;old_locus_tag=C9E97_20580
NZ_PYKA01000124.1	Protein Homology	CDS	44615	46531	.	-	0	ID=cds-WP_000516126.1;Parent=gene-C9E97_RS20110;Dbxref=GenBank:WP_000516126.1;Name=WP_000516126.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=C9E97_RS20110;product=molecular chaperone DnaK;protein_id=WP_000516126.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	46879	47283	.	+	.	ID=gene-C9E97_RS20115;Name=C9E97_RS20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20115;old_locus_tag=C9E97_20585
NZ_PYKA01000124.1	Protein Homology	CDS	46879	47283	.	+	0	ID=cds-WP_001258086.1;Parent=gene-C9E97_RS20115;Dbxref=GenBank:WP_001258086.1;Name=WP_001258086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459016.1;locus_tag=C9E97_RS20115;product=DUF2541 family protein;protein_id=WP_001258086.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	47319	48032	.	+	.	ID=gene-C9E97_RS20120;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=C9E97_RS20120;old_locus_tag=C9E97_20590
NZ_PYKA01000124.1	Protein Homology	CDS	47319	48032	.	+	0	ID=cds-WP_001103477.1;Parent=gene-C9E97_RS20120;Dbxref=GenBank:WP_001103477.1;Name=WP_001103477.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459015.1;locus_tag=C9E97_RS20120;product=acidic protein MsyB;protein_id=WP_001103477.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	48182	48748	.	+	.	ID=gene-C9E97_RS20125;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=C9E97_RS20125;old_locus_tag=C9E97_20595
NZ_PYKA01000124.1	Protein Homology	CDS	48182	48748	.	+	0	ID=cds-WP_000528525.1;Parent=gene-C9E97_RS20125;Dbxref=GenBank:WP_000528525.1;Name=WP_000528525.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459014.1;locus_tag=C9E97_RS20125;product=acetate uptake transporter;protein_id=WP_000528525.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	48805	49395	.	-	.	ID=gene-C9E97_RS20130;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=C9E97_RS20130;old_locus_tag=C9E97_20600
NZ_PYKA01000124.1	Protein Homology	CDS	48805	49395	.	-	0	ID=cds-WP_000380373.1;Parent=gene-C9E97_RS20130;Dbxref=GenBank:WP_000380373.1;Name=WP_000380373.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380375.1;locus_tag=C9E97_RS20130;product=molybdopterin adenylyltransferase;protein_id=WP_000380373.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	49506	50459	.	-	.	ID=gene-C9E97_RS20135;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=C9E97_RS20135;old_locus_tag=C9E97_20605
NZ_PYKA01000124.1	Protein Homology	CDS	49506	50459	.	-	0	ID=cds-WP_000130175.1;Parent=gene-C9E97_RS20135;Dbxref=GenBank:WP_000130175.1;Name=WP_000130175.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459012.1;locus_tag=C9E97_RS20135;product=transaldolase;protein_id=WP_000130175.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	50728	52158	.	+	.	ID=gene-C9E97_RS20140;Name=C9E97_RS20140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20140;old_locus_tag=C9E97_20610
NZ_PYKA01000124.1	Protein Homology	CDS	50728	52158	.	+	0	ID=cds-WP_050068120.1;Parent=gene-C9E97_RS20140;Dbxref=GenBank:WP_050068120.1;Name=WP_050068120.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459011.1;locus_tag=C9E97_RS20140;product=alanine/glycine:cation symporter family protein;protein_id=WP_050068120.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	52237	53010	.	+	.	ID=gene-C9E97_RS20145;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=C9E97_RS20145;old_locus_tag=C9E97_20615
NZ_PYKA01000124.1	Protein Homology	CDS	52237	53010	.	+	0	ID=cds-WP_000906175.1;Parent=gene-C9E97_RS20145;Dbxref=GenBank:WP_000906175.1;Name=WP_000906175.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459010.1;locus_tag=C9E97_RS20145;product=peroxide stress protein YaaA;protein_id=WP_000906175.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	53104	54390	.	-	.	ID=gene-C9E97_RS20150;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=C9E97_RS20150;old_locus_tag=C9E97_20620
NZ_PYKA01000124.1	Protein Homology	CDS	53104	54390	.	-	0	ID=cds-WP_000781110.1;Parent=gene-C9E97_RS20150;Dbxref=GenBank:WP_000781110.1;Name=WP_000781110.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459009.1;locus_tag=C9E97_RS20150;product=threonine synthase;protein_id=WP_000781110.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	54394	55323	.	-	.	ID=gene-C9E97_RS20155;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=C9E97_RS20155;old_locus_tag=C9E97_20625
NZ_PYKA01000124.1	Protein Homology	CDS	54394	55323	.	-	0	ID=cds-WP_000241685.1;Parent=gene-C9E97_RS20155;Dbxref=GenBank:WP_000241685.1;Name=WP_000241685.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459008.1;locus_tag=C9E97_RS20155;product=homoserine kinase;protein_id=WP_000241685.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	55325	57787	.	-	.	ID=gene-C9E97_RS20160;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=C9E97_RS20160;old_locus_tag=C9E97_20630
NZ_PYKA01000124.1	Protein Homology	CDS	55325	57787	.	-	0	ID=cds-WP_001264677.1;Parent=gene-C9E97_RS20160;Dbxref=GenBank:WP_001264677.1;Name=WP_001264677.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=C9E97_RS20160;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_001264677.1;transl_table=11
NZ_PYKA01000124.1	cmsearch	sequence_feature	57814	57934	.	-	.	ID=id-NZ_PYKA01000124.1:57814..57934;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PYKA01000124.1	RefSeq	gene	57870	57935	.	-	.	ID=gene-C9E97_RS20165;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=C9E97_RS20165;old_locus_tag=C9E97_20635
NZ_PYKA01000124.1	Protein Homology	CDS	57870	57935	.	-	0	ID=cds-WP_001575544.1;Parent=gene-C9E97_RS20165;Dbxref=GenBank:WP_001575544.1;Name=WP_001575544.1;Ontology_term=GO:0009088,GO:0031554,GO:0031556;gbkey=CDS;gene=thrL;go_process=threonine biosynthetic process|0009088||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459006.1;locus_tag=C9E97_RS20165;product=thr operon leader peptide;protein_id=WP_001575544.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	58157	58834	.	-	.	ID=gene-C9E97_RS20170;Name=C9E97_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20170;old_locus_tag=C9E97_20640
NZ_PYKA01000124.1	Protein Homology	CDS	58157	58834	.	-	0	ID=cds-WP_135369338.1;Parent=gene-C9E97_RS20170;Dbxref=GenBank:WP_135369338.1;Name=WP_135369338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266778.1;locus_tag=C9E97_RS20170;product=tRNA/rRNA methyltransferase;protein_id=WP_135369338.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	59234	59374	.	-	.	ID=gene-C9E97_RS20175;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=C9E97_RS20175;old_locus_tag=C9E97_20645
NZ_PYKA01000124.1	Protein Homology	CDS	59234	59374	.	-	0	ID=cds-WP_001541509.1;Parent=gene-C9E97_RS20175;Dbxref=GenBank:WP_001541509.1;Name=WP_001541509.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463455.1;locus_tag=C9E97_RS20175;product=protein YjjY;protein_id=WP_001541509.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	59470	60186	.	+	.	ID=gene-C9E97_RS20180;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=C9E97_RS20180;old_locus_tag=C9E97_20650
NZ_PYKA01000124.1	Protein Homology	CDS	59470	60186	.	+	0	ID=cds-WP_001194359.1;Parent=gene-C9E97_RS20180;Dbxref=GenBank:WP_001194359.1;Name=WP_001194359.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=C9E97_RS20180;product=two-component system response regulator ArcA;protein_id=WP_001194359.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	60453	60767	.	+	.	ID=gene-C9E97_RS20185;Name=C9E97_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20185;old_locus_tag=C9E97_20655
NZ_PYKA01000124.1	Protein Homology	CDS	60453	60767	.	+	0	ID=cds-WP_135369339.1;Parent=gene-C9E97_RS20185;Dbxref=GenBank:WP_135369339.1;Name=WP_135369339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463453.1;locus_tag=C9E97_RS20185;product=hypothetical protein;protein_id=WP_135369339.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	61152	61823	.	+	.	ID=gene-C9E97_RS20190;Name=C9E97_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20190;old_locus_tag=C9E97_20660
NZ_PYKA01000124.1	Protein Homology	CDS	61152	61823	.	+	0	ID=cds-WP_000811635.1;Parent=gene-C9E97_RS20190;Dbxref=GenBank:WP_000811635.1;Name=WP_000811635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463452.1;locus_tag=C9E97_RS20190;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000811635.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	62162	62707	.	+	.	ID=gene-C9E97_RS20195;Name=C9E97_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20195;old_locus_tag=C9E97_20665
NZ_PYKA01000124.1	Protein Homology	CDS	62162	62707	.	+	0	ID=cds-WP_000482239.1;Parent=gene-C9E97_RS20195;Dbxref=GenBank:WP_000482239.1;Name=WP_000482239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463451.1;locus_tag=C9E97_RS20195;product=fimbrial protein;protein_id=WP_000482239.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	62778	63461	.	+	.	ID=gene-C9E97_RS20200;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=C9E97_RS20200;old_locus_tag=C9E97_20670
NZ_PYKA01000124.1	Protein Homology	CDS	62778	63461	.	+	0	ID=cds-WP_000680523.1;Parent=gene-C9E97_RS20200;Dbxref=GenBank:WP_000680523.1;Name=WP_000680523.1;gbkey=CDS;gene=sthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463450.1;locus_tag=C9E97_RS20200;product=fimbrial biogenesis chaperone SthA;protein_id=WP_000680523.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	63507	66044	.	+	.	ID=gene-C9E97_RS20205;Name=C9E97_RS20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20205;old_locus_tag=C9E97_20675
NZ_PYKA01000124.1	Protein Homology	CDS	63507	66044	.	+	0	ID=cds-WP_001160707.1;Parent=gene-C9E97_RS20205;Dbxref=GenBank:WP_001160707.1;Name=WP_001160707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=C9E97_RS20205;product=fimbrial outer membrane usher protein;protein_id=WP_001160707.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	66062	66619	.	+	.	ID=gene-C9E97_RS20210;Name=C9E97_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20210;old_locus_tag=C9E97_20680
NZ_PYKA01000124.1	Protein Homology	CDS	66062	66619	.	+	0	ID=cds-WP_001056984.1;Parent=gene-C9E97_RS20210;Dbxref=GenBank:WP_001056984.1;Name=WP_001056984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463448.1;locus_tag=C9E97_RS20210;product=fimbrial protein;protein_id=WP_001056984.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	66660	67745	.	+	.	ID=gene-C9E97_RS20215;Name=sthE;gbkey=Gene;gene=sthE;gene_biotype=protein_coding;locus_tag=C9E97_RS20215;old_locus_tag=C9E97_20685
NZ_PYKA01000124.1	Protein Homology	CDS	66660	67745	.	+	0	ID=cds-WP_135369561.1;Parent=gene-C9E97_RS20215;Dbxref=GenBank:WP_135369561.1;Name=WP_135369561.1;gbkey=CDS;gene=sthE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463447.1;locus_tag=C9E97_RS20215;product=fimbrial major subunit SthE;protein_id=WP_135369561.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	67803	69152	.	-	.	ID=gene-C9E97_RS20220;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=C9E97_RS20220;old_locus_tag=C9E97_20690
NZ_PYKA01000124.1	Protein Homology	CDS	67803	69152	.	-	0	ID=cds-WP_000920394.1;Parent=gene-C9E97_RS20220;Dbxref=GenBank:WP_000920394.1;Name=WP_000920394.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463446.1;locus_tag=C9E97_RS20220;product=cell envelope integrity protein CreD;protein_id=WP_000920394.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	69210	70634	.	-	.	ID=gene-C9E97_RS20225;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=C9E97_RS20225;old_locus_tag=C9E97_20695
NZ_PYKA01000124.1	Protein Homology	CDS	69210	70634	.	-	0	ID=cds-WP_023232163.1;Parent=gene-C9E97_RS20225;Dbxref=GenBank:WP_023232163.1;Name=WP_023232163.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463445.1;locus_tag=C9E97_RS20225;product=two-component system sensor histidine kinase CreC;protein_id=WP_023232163.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	70634	71323	.	-	.	ID=gene-C9E97_RS20230;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=C9E97_RS20230;old_locus_tag=C9E97_20700
NZ_PYKA01000124.1	Protein Homology	CDS	70634	71323	.	-	0	ID=cds-WP_001187046.1;Parent=gene-C9E97_RS20230;Dbxref=GenBank:WP_001187046.1;Name=WP_001187046.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463444.1;locus_tag=C9E97_RS20230;product=two-component system response regulator CreB;protein_id=WP_001187046.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	71336	71809	.	-	.	ID=gene-C9E97_RS20235;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=C9E97_RS20235;old_locus_tag=C9E97_20705
NZ_PYKA01000124.1	Protein Homology	CDS	71336	71809	.	-	0	ID=cds-WP_000875811.1;Parent=gene-C9E97_RS20235;Dbxref=GenBank:WP_000875811.1;Name=WP_000875811.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463443.1;locus_tag=C9E97_RS20235;product=protein CreA;protein_id=WP_000875811.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	72021	72890	.	+	.	ID=gene-C9E97_RS20240;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=C9E97_RS20240;old_locus_tag=C9E97_20710
NZ_PYKA01000124.1	Protein Homology	CDS	72021	72890	.	+	0	ID=cds-WP_000371685.1;Parent=gene-C9E97_RS20240;Dbxref=GenBank:WP_000371685.1;Name=WP_000371685.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463442.1;locus_tag=C9E97_RS20240;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_000371685.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	72887	73534	.	-	.	ID=gene-C9E97_RS20245;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=C9E97_RS20245;old_locus_tag=C9E97_20715
NZ_PYKA01000124.1	Protein Homology	CDS	72887	73534	.	-	0	ID=cds-WP_000942363.1;Parent=gene-C9E97_RS20245;Dbxref=GenBank:WP_000942363.1;Name=WP_000942363.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463441.1;locus_tag=C9E97_RS20245;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_000942363.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	73583	74098	.	+	.	ID=gene-C9E97_RS20250;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=C9E97_RS20250;old_locus_tag=C9E97_20720
NZ_PYKA01000124.1	Protein Homology	CDS	73583	74098	.	+	0	ID=cds-WP_000554310.1;Parent=gene-C9E97_RS20250;Dbxref=GenBank:WP_000554310.1;Name=WP_000554310.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463440.1;locus_tag=C9E97_RS20250;product=inosine/xanthosine triphosphatase;protein_id=WP_000554310.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	74200	74526	.	-	.	ID=gene-C9E97_RS20260;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=C9E97_RS20260;old_locus_tag=C9E97_20730
NZ_PYKA01000124.1	Protein Homology	CDS	74200	74526	.	-	0	ID=cds-WP_000192003.1;Parent=gene-C9E97_RS20260;Dbxref=GenBank:WP_000192003.1;Name=WP_000192003.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463439.1;locus_tag=C9E97_RS20260;product=trp operon repressor;protein_id=WP_000192003.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	74584	76521	.	-	.	ID=gene-C9E97_RS20265;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=C9E97_RS20265;old_locus_tag=C9E97_20735
NZ_PYKA01000124.1	Protein Homology	CDS	74584	76521	.	-	0	ID=cds-WP_000373267.1;Parent=gene-C9E97_RS20265;Dbxref=GenBank:WP_000373267.1;Name=WP_000373267.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155637.1;locus_tag=C9E97_RS20265;product=murein transglycosylase;protein_id=WP_000373267.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	76730	78397	.	+	.	ID=gene-C9E97_RS20270;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=C9E97_RS20270;old_locus_tag=C9E97_20745
NZ_PYKA01000124.1	Protein Homology	CDS	76730	78397	.	+	0	ID=cds-WP_000046770.1;Parent=gene-C9E97_RS20270;Dbxref=GenBank:WP_000046770.1;Name=WP_000046770.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=C9E97_RS20270;product=energy-dependent translational throttle protein EttA;protein_id=WP_000046770.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	78515	79747	.	-	.	ID=gene-C9E97_RS20275;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=C9E97_RS20275;old_locus_tag=C9E97_20750
NZ_PYKA01000124.1	Protein Homology	CDS	78515	79747	.	-	0	ID=cds-WP_023195063.1;Parent=gene-C9E97_RS20275;Dbxref=GenBank:WP_023195063.1;Name=WP_023195063.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=C9E97_RS20275;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_023195063.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	79898	81280	.	-	.	ID=gene-C9E97_RS20280;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=C9E97_RS20280;old_locus_tag=C9E97_20755
NZ_PYKA01000124.1	Protein Homology	CDS	79898	81280	.	-	0	ID=cds-WP_001029710.1;Parent=gene-C9E97_RS20280;Dbxref=GenBank:WP_001029710.1;Name=WP_001029710.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=C9E97_RS20280;product=DNA repair protein RadA;protein_id=WP_001029710.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	81364	82332	.	-	.	ID=gene-C9E97_RS20285;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=C9E97_RS20285;old_locus_tag=C9E97_20760
NZ_PYKA01000124.1	Protein Homology	CDS	81364	82332	.	-	0	ID=cds-WP_001132983.1;Parent=gene-C9E97_RS20285;Dbxref=GenBank:WP_001132983.1;Name=WP_001132983.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463434.1;locus_tag=C9E97_RS20285;product=phosphoserine phosphatase;protein_id=WP_001132983.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	82449	83093	.	+	.	ID=gene-C9E97_RS20295;Name=C9E97_RS20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20295;old_locus_tag=C9E97_20770
NZ_PYKA01000124.1	Protein Homology	CDS	82449	83093	.	+	0	ID=cds-WP_000090067.1;Parent=gene-C9E97_RS20295;Dbxref=GenBank:WP_000090067.1;Name=WP_000090067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463433.2;locus_tag=C9E97_RS20295;product=YtjB family periplasmic protein;protein_id=WP_000090067.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	83127	84143	.	+	.	ID=gene-C9E97_RS20300;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=C9E97_RS20300;old_locus_tag=C9E97_20775
NZ_PYKA01000124.1	Protein Homology	CDS	83127	84143	.	+	0	ID=cds-WP_061376692.1;Parent=gene-C9E97_RS20300;Dbxref=GenBank:WP_061376692.1;Name=WP_061376692.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463432.1;locus_tag=C9E97_RS20300;product=lipoate--protein ligase LplA;protein_id=WP_061376692.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	pseudogene	84228	84720	.	-	.	ID=gene-C9E97_RS20310;Name=C9E97_RS20310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS20310;old_locus_tag=C9E97_20780;pseudo=true
NZ_PYKA01000124.1	Protein Homology	CDS	84228	84720	.	-	0	ID=cds-C9E97_RS20310;Parent=gene-C9E97_RS20310;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204888.1;locus_tag=C9E97_RS20310;product=REP-associated tyrosine transposase;pseudo=true;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	84927	85646	.	-	.	ID=gene-C9E97_RS20315;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=C9E97_RS20315;old_locus_tag=C9E97_20785
NZ_PYKA01000124.1	Protein Homology	CDS	84927	85646	.	-	0	ID=cds-WP_000224864.1;Parent=gene-C9E97_RS20315;Dbxref=GenBank:WP_000224864.1;Name=WP_000224864.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463426.1;locus_tag=C9E97_RS20315;product=purine-nucleoside phosphorylase;protein_id=WP_000224864.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	85856	87079	.	-	.	ID=gene-C9E97_RS20320;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=C9E97_RS20320;old_locus_tag=C9E97_20790
NZ_PYKA01000124.1	Protein Homology	CDS	85856	87079	.	-	0	ID=cds-WP_000816454.1;Parent=gene-C9E97_RS20320;Dbxref=GenBank:WP_000816454.1;Name=WP_000816454.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463425.1;locus_tag=C9E97_RS20320;product=phosphopentomutase;protein_id=WP_000816454.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	87131	88453	.	-	.	ID=gene-C9E97_RS20325;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=C9E97_RS20325;old_locus_tag=C9E97_20795
NZ_PYKA01000124.1	Protein Homology	CDS	87131	88453	.	-	0	ID=cds-WP_000477838.1;Parent=gene-C9E97_RS20325;Dbxref=GenBank:WP_000477838.1;Name=WP_000477838.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=C9E97_RS20325;product=thymidine phosphorylase;protein_id=WP_000477838.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	88577	89356	.	-	.	ID=gene-C9E97_RS20330;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=C9E97_RS20330;old_locus_tag=C9E97_20800
NZ_PYKA01000124.1	Protein Homology	CDS	88577	89356	.	-	0	ID=cds-WP_001519713.1;Parent=gene-C9E97_RS20330;Dbxref=GenBank:WP_001519713.1;Name=WP_001519713.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=C9E97_RS20330;product=deoxyribose-phosphate aldolase;protein_id=WP_001519713.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	89616	91166	.	+	.	ID=gene-C9E97_RS20335;Name=C9E97_RS20335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20335;old_locus_tag=C9E97_20805
NZ_PYKA01000124.1	Protein Homology	CDS	89616	91166	.	+	0	ID=cds-WP_135369562.1;Parent=gene-C9E97_RS20335;Dbxref=GenBank:WP_135369562.1;Name=WP_135369562.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463422.1;locus_tag=C9E97_RS20335;product=YjjI family glycine radical enzyme;protein_id=WP_135369562.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	91138	92001	.	+	.	ID=gene-C9E97_RS20340;Name=C9E97_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20340;old_locus_tag=C9E97_20810
NZ_PYKA01000124.1	Protein Homology	CDS	91138	92001	.	+	0	ID=cds-WP_001064944.1;Parent=gene-C9E97_RS20340;Dbxref=GenBank:WP_001064944.1;Name=WP_001064944.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463421.1;locus_tag=C9E97_RS20340;product=YjjW family glycine radical enzyme activase;protein_id=WP_001064944.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	92034	92807	.	-	.	ID=gene-C9E97_RS20345;Name=C9E97_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20345;old_locus_tag=C9E97_20815
NZ_PYKA01000124.1	Protein Homology	CDS	92034	92807	.	-	0	ID=cds-WP_135369563.1;Parent=gene-C9E97_RS20345;Dbxref=GenBank:WP_135369563.1;Name=WP_135369563.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463420.1;locus_tag=C9E97_RS20345;product=metal-dependent hydrolase;protein_id=WP_135369563.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	92804	93877	.	-	.	ID=gene-C9E97_RS20350;Name=C9E97_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20350;old_locus_tag=C9E97_20820
NZ_PYKA01000124.1	Protein Homology	CDS	92804	93877	.	-	0	ID=cds-WP_000531540.1;Parent=gene-C9E97_RS20350;Dbxref=GenBank:WP_000531540.1;Name=WP_000531540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463419.1;locus_tag=C9E97_RS20350;product=patatin-like phospholipase family protein;protein_id=WP_000531540.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	94001	94162	.	-	.	ID=gene-C9E97_RS20355;Name=C9E97_RS20355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20355;old_locus_tag=C9E97_20825
NZ_PYKA01000124.1	Protein Homology	CDS	94001	94162	.	-	0	ID=cds-WP_000490276.1;Parent=gene-C9E97_RS20355;Dbxref=GenBank:WP_000490276.1;Name=WP_000490276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=C9E97_RS20355;product=DUF1328 domain-containing protein;protein_id=WP_000490276.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	94291	94908	.	-	.	ID=gene-C9E97_RS20360;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=C9E97_RS20360;old_locus_tag=C9E97_20830
NZ_PYKA01000124.1	Protein Homology	CDS	94291	94908	.	-	0	ID=cds-WP_000178963.1;Parent=gene-C9E97_RS20360;Dbxref=GenBank:WP_000178963.1;Name=WP_000178963.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463417.1;locus_tag=C9E97_RS20360;product=molecular chaperone OsmY;protein_id=WP_000178963.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	95310	96899	.	-	.	ID=gene-C9E97_RS20365;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=C9E97_RS20365;old_locus_tag=C9E97_20835
NZ_PYKA01000124.1	Protein Homology	CDS	95310	96899	.	-	0	ID=cds-WP_000175966.1;Parent=gene-C9E97_RS20365;Dbxref=GenBank:WP_000175966.1;Name=WP_000175966.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=C9E97_RS20365;product=peptide chain release factor 3;protein_id=WP_000175966.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	96991	97668	.	-	.	ID=gene-C9E97_RS20370;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=C9E97_RS20370;old_locus_tag=C9E97_20840
NZ_PYKA01000124.1	Protein Homology	CDS	96991	97668	.	-	0	ID=cds-WP_000870686.1;Parent=gene-C9E97_RS20370;Dbxref=GenBank:WP_000870686.1;Name=WP_000870686.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=C9E97_RS20370;product=pyrimidine 5'-nucleotidase;protein_id=WP_000870686.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	97690	98136	.	-	.	ID=gene-C9E97_RS20375;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=C9E97_RS20375;old_locus_tag=C9E97_20845
NZ_PYKA01000124.1	Protein Homology	CDS	97690	98136	.	-	0	ID=cds-WP_001092435.1;Parent=gene-C9E97_RS20375;Dbxref=GenBank:WP_001092435.1;Name=WP_001092435.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463414.1;locus_tag=C9E97_RS20375;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001092435.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	98081	98518	.	-	.	ID=gene-C9E97_RS20380;Name=C9E97_RS20380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20380;old_locus_tag=C9E97_20850
NZ_PYKA01000124.1	Protein Homology	CDS	98081	98518	.	-	0	ID=cds-WP_000203998.1;Parent=gene-C9E97_RS20380;Dbxref=GenBank:WP_000203998.1;Name=WP_000203998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463413.1;locus_tag=C9E97_RS20380;product=DNA polymerase III subunit psi;protein_id=WP_000203998.1;transl_table=11
NZ_PYKA01000124.1	RefSeq	gene	98621	99649	.	+	.	ID=gene-C9E97_RS20385;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=C9E97_RS20385;old_locus_tag=C9E97_20855
NZ_PYKA01000124.1	Protein Homology	CDS	98621	99649	.	+	0	ID=cds-WP_001272271.1;Parent=gene-C9E97_RS20385;Dbxref=GenBank:WP_001272271.1;Name=WP_001272271.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=C9E97_RS20385;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_001272271.1;transl_table=11
##sequence-region NZ_PYKA01000031.1 1 2110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000031.1	RefSeq	region	1	2110	.	+	.	ID=NZ_PYKA01000031.1:1..2110;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000031.1	RefSeq	gene	107	1027	.	-	.	ID=gene-C9E97_RS03790;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=C9E97_RS03790;old_locus_tag=C9E97_03900
NZ_PYKA01000031.1	Protein Homology	CDS	107	1027	.	-	0	ID=cds-WP_135369558.1;Parent=gene-C9E97_RS03790;Dbxref=GenBank:WP_135369558.1;Name=WP_135369558.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461994.1;locus_tag=C9E97_RS03790;product=agmatinase;protein_id=WP_135369558.1;transl_table=11
NZ_PYKA01000031.1	RefSeq	gene	1232	2110	.	-	.	ID=gene-C9E97_RS03795;Name=C9E97_RS03795;end_range=2110,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03795;old_locus_tag=C9E97_03905;partial=true
NZ_PYKA01000031.1	Protein Homology	CDS	1232	2110	.	-	0	ID=cds-WP_245304072.1;Parent=gene-C9E97_RS03795;Dbxref=GenBank:WP_245304072.1;Name=WP_245304072.1;end_range=2110,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461995.3;locus_tag=C9E97_RS03795;partial=true;product=alpha/beta fold hydrolase;protein_id=WP_245304072.1;transl_table=11
##sequence-region NZ_PYKA01000108.1 1 1749
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000108.1	RefSeq	region	1	1749	.	+	.	ID=NZ_PYKA01000108.1:1..1749;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000108.1	RefSeq	gene	1	1725	.	+	.	ID=gene-C9E97_RS14845;Name=C9E97_RS14845;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9E97_RS14845;old_locus_tag=C9E97_15175;partial=true;start_range=.,1
NZ_PYKA01000108.1	cmsearch	rRNA	1	1725	.	+	.	ID=rna-C9E97_RS14845;Parent=gene-C9E97_RS14845;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS14845;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_PYKA01000108.1	cmsearch	exon	1	1725	.	+	.	ID=exon-C9E97_RS14845-1;Parent=rna-C9E97_RS14845;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS14845;partial=true;product=23S ribosomal RNA;start_range=.,1
##sequence-region NZ_PYKA01000056.1 1 1736
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000056.1	RefSeq	region	1	1736	.	+	.	ID=NZ_PYKA01000056.1:1..1736;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000056.1	RefSeq	gene	146	1687	.	+	.	ID=gene-C9E97_RS07605;Name=C9E97_RS07605;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9E97_RS07605;old_locus_tag=C9E97_07780
NZ_PYKA01000056.1	cmsearch	rRNA	146	1687	.	+	.	ID=rna-C9E97_RS07605;Parent=gene-C9E97_RS07605;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS07605;product=16S ribosomal RNA
NZ_PYKA01000056.1	cmsearch	exon	146	1687	.	+	.	ID=exon-C9E97_RS07605-1;Parent=rna-C9E97_RS07605;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS07605;product=16S ribosomal RNA
##sequence-region NZ_PYKA01000141.1 1 1590
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000141.1	RefSeq	region	1	1590	.	+	.	ID=NZ_PYKA01000141.1:1..1590;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000141.1	RefSeq	gene	49	240	.	+	.	ID=gene-C9E97_RS23410;Name=C9E97_RS23410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23410;old_locus_tag=C9E97_23955
NZ_PYKA01000141.1	Protein Homology	CDS	49	240	.	+	0	ID=cds-WP_077942161.1;Parent=gene-C9E97_RS23410;Dbxref=GenBank:WP_077942161.1;Name=WP_077942161.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000994230.1;locus_tag=C9E97_RS23410;product=SymE family type I addiction module toxin;protein_id=WP_077942161.1;transl_table=11
NZ_PYKA01000141.1	RefSeq	gene	279	779	.	-	.	ID=gene-C9E97_RS23415;Name=C9E97_RS23415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23415;old_locus_tag=C9E97_23960
NZ_PYKA01000141.1	Protein Homology	CDS	279	779	.	-	0	ID=cds-WP_080110572.1;Parent=gene-C9E97_RS23415;Dbxref=GenBank:WP_080110572.1;Name=WP_080110572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232789.1;locus_tag=C9E97_RS23415;product=hypothetical protein;protein_id=WP_080110572.1;transl_table=11
NZ_PYKA01000141.1	RefSeq	pseudogene	1063	1234	.	-	.	ID=gene-C9E97_RS24150;Name=C9E97_RS24150;end_range=1234,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS24150;partial=true;pseudo=true;start_range=.,1063
NZ_PYKA01000141.1	Protein Homology	CDS	1063	1234	.	-	0	ID=cds-C9E97_RS24150;Parent=gene-C9E97_RS24150;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1234,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000503212.1;locus_tag=C9E97_RS24150;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,1063;transl_table=11
NZ_PYKA01000141.1	RefSeq	pseudogene	1372	1590	.	-	.	ID=gene-C9E97_RS23620;Name=C9E97_RS23620;end_range=1590,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23620;old_locus_tag=C9E97_23965;partial=true;pseudo=true
NZ_PYKA01000141.1	Protein Homology	CDS	1372	1590	.	-	0	ID=cds-C9E97_RS23620;Parent=gene-C9E97_RS23620;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1590,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000171103.1;locus_tag=C9E97_RS23620;partial=true;product=type IV secretion protein Rhs;pseudo=true;transl_table=11
##sequence-region NZ_PYKA01000054.1 1 1277
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000054.1	RefSeq	region	1	1277	.	+	.	ID=NZ_PYKA01000054.1:1..1277;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000054.1	RefSeq	gene	57	998	.	+	.	ID=gene-C9E97_RS07465;Name=C9E97_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07465;old_locus_tag=C9E97_07640
NZ_PYKA01000054.1	Protein Homology	CDS	57	998	.	+	0	ID=cds-WP_001537910.1;Parent=gene-C9E97_RS07465;Dbxref=GenBank:WP_001537910.1;Name=WP_001537910.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537910.1;locus_tag=C9E97_RS07465;product=LysR family transcriptional regulator;protein_id=WP_001537910.1;transl_table=11
##sequence-region NZ_PYKA01000073.1 1 1225
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000073.1	RefSeq	region	1	1225	.	+	.	ID=NZ_PYKA01000073.1:1..1225;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000073.1	RefSeq	gene	220	1206	.	+	.	ID=gene-C9E97_RS10755;Name=C9E97_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10755;old_locus_tag=C9E97_11000
NZ_PYKA01000073.1	Protein Homology	CDS	220	1206	.	+	0	ID=cds-WP_058107667.1;Parent=gene-C9E97_RS10755;Dbxref=GenBank:WP_058107667.1;Name=WP_058107667.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000337539.1;locus_tag=C9E97_RS10755;product=IS110 family transposase;protein_id=WP_058107667.1;transl_table=11
##sequence-region NZ_PYKA01000072.1 1 1111
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000072.1	RefSeq	region	1	1111	.	+	.	ID=NZ_PYKA01000072.1:1..1111;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000072.1	RefSeq	gene	1	950	.	-	.	ID=gene-C9E97_RS10745;Name=C9E97_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10745;old_locus_tag=C9E97_10990;partial=true;start_range=.,1
NZ_PYKA01000072.1	Protein Homology	CDS	1	950	.	-	0	ID=cds-WP_135490134.1;Parent=gene-C9E97_RS10745;Dbxref=GenBank:WP_135490134.1;Name=WP_135490134.1;Ontology_term=GO:0006814,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=C9E97_RS10745;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_135490134.1;start_range=.,1;transl_table=11
NZ_PYKA01000072.1	RefSeq	gene	963	1111	.	-	.	ID=gene-C9E97_RS10750;Name=C9E97_RS10750;end_range=1111,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10750;old_locus_tag=C9E97_10995;partial=true
NZ_PYKA01000072.1	Protein Homology	CDS	963	1111	.	-	2	ID=cds-WP_023893864.1;Parent=gene-C9E97_RS10750;Dbxref=GenBank:WP_023893864.1;Name=WP_023893864.1;end_range=1111,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9E97_RS10750;partial=true;product=biotin/lipoyl-containing protein;protein_id=WP_023893864.1;transl_table=11
##sequence-region NZ_PYKA01000015.1 1 1103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000015.1	RefSeq	region	1	1103	.	+	.	ID=NZ_PYKA01000015.1:1..1103;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000015.1	RefSeq	pseudogene	1	273	.	+	.	ID=gene-C9E97_RS00975;Name=rfbV;gbkey=Gene;gene=rfbV;gene_biotype=pseudogene;locus_tag=C9E97_RS00975;old_locus_tag=C9E97_00990;partial=true;pseudo=true;start_range=.,1
NZ_PYKA01000015.1	Protein Homology	CDS	1	273	.	+	0	ID=cds-C9E97_RS00975;Parent=gene-C9E97_RS00975;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=rfbV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461032.1;locus_tag=C9E97_RS00975;partial=true;product=abequosyltransferase RfbV;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKA01000015.1	RefSeq	gene	594	1103	.	+	.	ID=gene-C9E97_RS00980;Name=C9E97_RS00980;end_range=1103,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00980;old_locus_tag=C9E97_00995;partial=true
NZ_PYKA01000015.1	Protein Homology	CDS	594	1103	.	+	0	ID=cds-WP_140029992.1;Parent=gene-C9E97_RS00980;Dbxref=GenBank:WP_140029992.1;Name=WP_140029992.1;end_range=1103,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461031.1;locus_tag=C9E97_RS00980;partial=true;product=glycosyltransferase;protein_id=WP_140029992.1;transl_table=11
##sequence-region NZ_PYKA01000018.1 1 1096
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000018.1	RefSeq	region	1	1096	.	+	.	ID=NZ_PYKA01000018.1:1..1096;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000018.1	RefSeq	gene	372	1019	.	+	.	ID=gene-C9E97_RS01205;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=C9E97_RS01205;old_locus_tag=C9E97_01225
NZ_PYKA01000018.1	Protein Homology	CDS	372	1019	.	+	0	ID=cds-WP_001115498.1;Parent=gene-C9E97_RS01205;Dbxref=GenBank:WP_001115498.1;Name=WP_001115498.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461189.1;locus_tag=C9E97_RS01205;product=nitrate/nitrite response regulator protein NarP;protein_id=WP_001115498.1;transl_table=11
##sequence-region NZ_PYKA01000089.1 1 1043
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000089.1	RefSeq	region	1	1043	.	+	.	ID=NZ_PYKA01000089.1:1..1043;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000089.1	RefSeq	gene	1	1043	.	-	.	ID=gene-C9E97_RS12150;Name=tuf;end_range=1043,.;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=C9E97_RS12150;old_locus_tag=C9E97_12435;partial=true;start_range=.,1
NZ_PYKA01000089.1	Protein Homology	CDS	1	1043	.	-	0	ID=cds-WP_016740776.1;Parent=gene-C9E97_RS12150;Dbxref=GenBank:WP_016740776.1;Name=WP_016740776.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;end_range=1043,.;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=C9E97_RS12150;partial=true;product=elongation factor Tu;protein_id=WP_016740776.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKA01000136.1 1 98263
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000136.1	RefSeq	region	1	98263	.	+	.	ID=NZ_PYKA01000136.1:1..98263;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000136.1	RefSeq	gene	42	797	.	+	.	ID=gene-C9E97_RS22395;Name=C9E97_RS22395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22395;old_locus_tag=C9E97_22925
NZ_PYKA01000136.1	Protein Homology	CDS	42	797	.	+	0	ID=cds-WP_000724553.1;Parent=gene-C9E97_RS22395;Dbxref=GenBank:WP_000724553.1;Name=WP_000724553.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462434.1;locus_tag=C9E97_RS22395;product=IclR family transcriptional regulator;protein_id=WP_000724553.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	841	1746	.	-	.	ID=gene-C9E97_RS22400;Name=C9E97_RS22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22400;old_locus_tag=C9E97_22930
NZ_PYKA01000136.1	Protein Homology	CDS	841	1746	.	-	0	ID=cds-WP_000192193.1;Parent=gene-C9E97_RS22400;Dbxref=GenBank:WP_000192193.1;Name=WP_000192193.1;Ontology_term=GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462433.1;locus_tag=C9E97_RS22400;product=dihydrodipicolinate synthase family protein;protein_id=WP_000192193.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	1790	3505	.	-	.	ID=gene-C9E97_RS22405;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=C9E97_RS22405;old_locus_tag=C9E97_22935
NZ_PYKA01000136.1	Protein Homology	CDS	1790	3505	.	-	0	ID=cds-WP_000078497.1;Parent=gene-C9E97_RS22405;Dbxref=GenBank:WP_000078497.1;Name=WP_000078497.1;Ontology_term=GO:0009097,GO:0009099,GO:0000287,GO:0004160,GO:0051536;gbkey=CDS;gene=ilvD;go_function=magnesium ion binding|0000287||IEA,dihydroxy-acid dehydratase activity|0004160||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,L-valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462432.1;locus_tag=C9E97_RS22405;product=dihydroxy-acid dehydratase;protein_id=WP_000078497.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	3502	4836	.	-	.	ID=gene-C9E97_RS22410;Name=C9E97_RS22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22410;old_locus_tag=C9E97_22940
NZ_PYKA01000136.1	Protein Homology	CDS	3502	4836	.	-	0	ID=cds-WP_001518078.1;Parent=gene-C9E97_RS22410;Dbxref=GenBank:WP_001518078.1;Name=WP_001518078.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001653833.1;locus_tag=C9E97_RS22410;product=MFS transporter;protein_id=WP_001518078.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	5174	6283	.	+	.	ID=gene-C9E97_RS22415;Name=C9E97_RS22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22415;old_locus_tag=C9E97_22945
NZ_PYKA01000136.1	Protein Homology	CDS	5174	6283	.	+	0	ID=cds-WP_000258846.1;Parent=gene-C9E97_RS22415;Dbxref=GenBank:WP_000258846.1;Name=WP_000258846.1;Ontology_term=GO:0008270,GO:0008888,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,glycerol dehydrogenase (NAD+) activity|0008888||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462431.1;locus_tag=C9E97_RS22415;product=glycerol dehydrogenase;protein_id=WP_000258846.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	6441	7937	.	+	.	ID=gene-C9E97_RS22420;Name=C9E97_RS22420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22420;old_locus_tag=C9E97_22950
NZ_PYKA01000136.1	Protein Homology	CDS	6441	7937	.	+	0	ID=cds-WP_240776462.1;Parent=gene-C9E97_RS22420;Dbxref=GenBank:WP_240776462.1;Name=WP_240776462.1;Ontology_term=GO:0006817,GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000786181.1;locus_tag=C9E97_RS22420;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_240776462.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	7947	8492	.	+	.	ID=gene-C9E97_RS22425;Name=C9E97_RS22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22425;old_locus_tag=C9E97_22955
NZ_PYKA01000136.1	Protein Homology	CDS	7947	8492	.	+	0	ID=cds-WP_023193670.1;Parent=gene-C9E97_RS22425;Dbxref=GenBank:WP_023193670.1;Name=WP_023193670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462429.1;locus_tag=C9E97_RS22425;product=hypothetical protein;protein_id=WP_023193670.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	8539	10047	.	-	.	ID=gene-C9E97_RS22430;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=C9E97_RS22430;old_locus_tag=C9E97_22960
NZ_PYKA01000136.1	Protein Homology	CDS	8539	10047	.	-	0	ID=cds-WP_000448180.1;Parent=gene-C9E97_RS22430;Dbxref=GenBank:WP_000448180.1;Name=WP_000448180.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462428.1;locus_tag=C9E97_RS22430;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_000448180.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	10246	10572	.	+	.	ID=gene-C9E97_RS22435;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=C9E97_RS22435;old_locus_tag=C9E97_22965
NZ_PYKA01000136.1	Protein Homology	CDS	10246	10572	.	+	0	ID=cds-WP_000434523.1;Parent=gene-C9E97_RS22435;Dbxref=GenBank:WP_000434523.1;Name=WP_000434523.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462427.1;locus_tag=C9E97_RS22435;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_000434523.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	10648	11478	.	+	.	ID=gene-C9E97_RS22440;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=C9E97_RS22440;old_locus_tag=C9E97_22970
NZ_PYKA01000136.1	Protein Homology	CDS	10648	11478	.	+	0	ID=cds-WP_135369726.1;Parent=gene-C9E97_RS22440;Dbxref=GenBank:WP_135369726.1;Name=WP_135369726.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462426.1;locus_tag=C9E97_RS22440;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_135369726.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	11572	12330	.	+	.	ID=gene-C9E97_RS22445;Name=C9E97_RS22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22445;old_locus_tag=C9E97_22975
NZ_PYKA01000136.1	Protein Homology	CDS	11572	12330	.	+	0	ID=cds-WP_000815085.1;Parent=gene-C9E97_RS22445;Dbxref=GenBank:WP_000815085.1;Name=WP_000815085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=C9E97_RS22445;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_000815085.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	12327	13910	.	-	.	ID=gene-C9E97_RS22450;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=C9E97_RS22450;old_locus_tag=C9E97_22980
NZ_PYKA01000136.1	Protein Homology	CDS	12327	13910	.	-	0	ID=cds-WP_001232871.1;Parent=gene-C9E97_RS22450;Dbxref=GenBank:WP_001232871.1;Name=WP_001232871.1;Ontology_term=GO:0006355,GO:0003700,GO:0005524,GO:0008134;gbkey=CDS;gene=rtcR;go_function=DNA-binding transcription factor activity|0003700||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462424.1;locus_tag=C9E97_RS22450;product=RNA repair transcriptional activator RtcR;protein_id=WP_001232871.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	14100	15653	.	+	.	ID=gene-C9E97_RS22455;Name=C9E97_RS22455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22455;old_locus_tag=C9E97_22985
NZ_PYKA01000136.1	Protein Homology	CDS	14100	15653	.	+	0	ID=cds-WP_135369367.1;Parent=gene-C9E97_RS22455;Dbxref=GenBank:WP_135369367.1;Name=WP_135369367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462423.1;locus_tag=C9E97_RS22455;product=vWA domain-containing protein;protein_id=WP_135369367.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	15999	17213	.	+	.	ID=gene-C9E97_RS22460;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;locus_tag=C9E97_RS22460;old_locus_tag=C9E97_22990
NZ_PYKA01000136.1	Protein Homology	CDS	15999	17213	.	+	0	ID=cds-WP_001105526.1;Parent=gene-C9E97_RS22460;Dbxref=GenBank:WP_001105526.1;Name=WP_001105526.1;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417879.1;locus_tag=C9E97_RS22460;product=RNA-splicing ligase RtcB;protein_id=WP_001105526.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	17217	18251	.	+	.	ID=gene-C9E97_RS22465;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=protein_coding;locus_tag=C9E97_RS22465;old_locus_tag=C9E97_22995
NZ_PYKA01000136.1	Protein Homology	CDS	17217	18251	.	+	0	ID=cds-WP_135369366.1;Parent=gene-C9E97_RS22465;Dbxref=GenBank:WP_135369366.1;Name=WP_135369366.1;Ontology_term=GO:0006396,GO:0003963;gbkey=CDS;gene=rtcA;go_function=RNA-3'-phosphate cyclase activity|0003963||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101029.1;locus_tag=C9E97_RS22465;product=RNA 3'-terminal phosphate cyclase;protein_id=WP_135369366.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	18248	18808	.	+	.	ID=gene-C9E97_RS22470;Name=C9E97_RS22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22470;old_locus_tag=C9E97_23000
NZ_PYKA01000136.1	Protein Homology	CDS	18248	18808	.	+	0	ID=cds-WP_000220926.1;Parent=gene-C9E97_RS22470;Dbxref=GenBank:WP_000220926.1;Name=WP_000220926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001650910.1;locus_tag=C9E97_RS22470;product=hypothetical protein;protein_id=WP_000220926.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	18950	21655	.	-	.	ID=gene-C9E97_RS22475;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=C9E97_RS22475;old_locus_tag=C9E97_23005
NZ_PYKA01000136.1	Protein Homology	CDS	18950	21655	.	-	0	ID=cds-WP_000907030.1;Parent=gene-C9E97_RS22475;Dbxref=GenBank:WP_000907030.1;Name=WP_000907030.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=C9E97_RS22475;product=HTH-type transcriptional regulator MalT;protein_id=WP_000907030.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	22249	24642	.	+	.	ID=gene-C9E97_RS22480;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=C9E97_RS22480;old_locus_tag=C9E97_23010
NZ_PYKA01000136.1	Protein Homology	CDS	22249	24642	.	+	0	ID=cds-WP_079834618.1;Parent=gene-C9E97_RS22480;Dbxref=GenBank:WP_079834618.1;Name=WP_079834618.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462417.1;locus_tag=C9E97_RS22480;product=maltodextrin phosphorylase;protein_id=WP_079834618.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	24652	26730	.	+	.	ID=gene-C9E97_RS22485;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=C9E97_RS22485;old_locus_tag=C9E97_23015
NZ_PYKA01000136.1	Protein Homology	CDS	24652	26730	.	+	0	ID=cds-WP_020838978.1;Parent=gene-C9E97_RS22485;Dbxref=GenBank:WP_020838978.1;Name=WP_020838978.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462416.1;locus_tag=C9E97_RS22485;product=4-alpha-glucanotransferase;protein_id=WP_020838978.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	26849	28165	.	-	.	ID=gene-C9E97_RS22490;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=C9E97_RS22490;old_locus_tag=C9E97_23020
NZ_PYKA01000136.1	Protein Homology	CDS	26849	28165	.	-	0	ID=cds-WP_001131741.1;Parent=gene-C9E97_RS22490;Dbxref=GenBank:WP_001131741.1;Name=WP_001131741.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462415.1;locus_tag=C9E97_RS22490;product=gluconate transporter;protein_id=WP_001131741.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	28542	29117	.	-	.	ID=gene-C9E97_RS22495;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=C9E97_RS22495;old_locus_tag=C9E97_23025
NZ_PYKA01000136.1	Protein Homology	CDS	28542	29117	.	-	0	ID=cds-WP_000619387.1;Parent=gene-C9E97_RS22495;Dbxref=GenBank:WP_000619387.1;Name=WP_000619387.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=C9E97_RS22495;product=Fe-S biogenesis protein NfuA;protein_id=WP_000619387.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	29176	29859	.	-	.	ID=gene-C9E97_RS22500;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=C9E97_RS22500;old_locus_tag=C9E97_23030
NZ_PYKA01000136.1	Protein Homology	CDS	29176	29859	.	-	0	ID=cds-WP_000958733.1;Parent=gene-C9E97_RS22500;Dbxref=GenBank:WP_000958733.1;Name=WP_000958733.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462413.1;locus_tag=C9E97_RS22500;product=DNA utilization protein GntX;protein_id=WP_000958733.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	29897	30667	.	+	.	ID=gene-C9E97_RS22505;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=C9E97_RS22505;old_locus_tag=C9E97_23035
NZ_PYKA01000136.1	Protein Homology	CDS	29897	30667	.	+	0	ID=cds-WP_000998144.1;Parent=gene-C9E97_RS22505;Dbxref=GenBank:WP_000998144.1;Name=WP_000998144.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462412.1;locus_tag=C9E97_RS22505;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_000998144.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	30703	31629	.	-	.	ID=gene-C9E97_RS22510;Name=C9E97_RS22510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22510;old_locus_tag=C9E97_23040
NZ_PYKA01000136.1	Protein Homology	CDS	30703	31629	.	-	0	ID=cds-WP_023244632.1;Parent=gene-C9E97_RS22510;Dbxref=GenBank:WP_023244632.1;Name=WP_023244632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462411.1;locus_tag=C9E97_RS22510;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_023244632.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	31864	32100	.	-	.	ID=gene-C9E97_RS22515;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=C9E97_RS22515;old_locus_tag=C9E97_23045
NZ_PYKA01000136.1	Protein Homology	CDS	31864	32100	.	-	0	ID=cds-WP_000157589.1;Parent=gene-C9E97_RS22515;Dbxref=GenBank:WP_000157589.1;Name=WP_000157589.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462410.1;locus_tag=C9E97_RS22515;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_000157589.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	32113	34431	.	-	.	ID=gene-C9E97_RS22520;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=C9E97_RS22520;old_locus_tag=C9E97_23050
NZ_PYKA01000136.1	Protein Homology	CDS	32113	34431	.	-	0	ID=cds-WP_000736983.1;Parent=gene-C9E97_RS22520;Dbxref=GenBank:WP_000736983.1;Name=WP_000736983.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462409.1;locus_tag=C9E97_RS22520;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_000736983.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	34450	34677	.	-	.	ID=gene-C9E97_RS22525;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=C9E97_RS22525;old_locus_tag=C9E97_23055
NZ_PYKA01000136.1	Protein Homology	CDS	34450	34677	.	-	0	ID=cds-WP_001160955.1;Parent=gene-C9E97_RS22525;Dbxref=GenBank:WP_001160955.1;Name=WP_001160955.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462408.1;locus_tag=C9E97_RS22525;product=ferrous iron transporter A;protein_id=WP_001160955.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	35114	37423	.	-	.	ID=gene-C9E97_RS22530;Name=C9E97_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22530;old_locus_tag=C9E97_23065
NZ_PYKA01000136.1	Protein Homology	CDS	35114	37423	.	-	0	ID=cds-WP_135369365.1;Parent=gene-C9E97_RS22530;Dbxref=GenBank:WP_135369365.1;Name=WP_135369365.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312276.2;locus_tag=C9E97_RS22530;product=Tex family protein;protein_id=WP_135369365.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	37522	37995	.	-	.	ID=gene-C9E97_RS22535;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=C9E97_RS22535;old_locus_tag=C9E97_23070
NZ_PYKA01000136.1	Protein Homology	CDS	37522	37995	.	-	0	ID=cds-WP_135369364.1;Parent=gene-C9E97_RS22535;Dbxref=GenBank:WP_135369364.1;Name=WP_135369364.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=C9E97_RS22535;product=transcription elongation factor GreB;protein_id=WP_135369364.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	38221	38940	.	+	.	ID=gene-C9E97_RS22540;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=C9E97_RS22540;old_locus_tag=C9E97_23075
NZ_PYKA01000136.1	Protein Homology	CDS	38221	38940	.	+	0	ID=cds-WP_001157751.1;Parent=gene-C9E97_RS22540;Dbxref=GenBank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007374840.1;locus_tag=C9E97_RS22540;product=osmolarity response regulator transcription factor OmpR;protein_id=WP_001157751.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	38937	40289	.	+	.	ID=gene-C9E97_RS22545;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=C9E97_RS22545;old_locus_tag=C9E97_23080
NZ_PYKA01000136.1	Protein Homology	CDS	38937	40289	.	+	0	ID=cds-WP_001253818.1;Parent=gene-C9E97_RS22545;Dbxref=GenBank:WP_001253818.1;Name=WP_001253818.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462404.1;locus_tag=C9E97_RS22545;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_001253818.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	40364	41983	.	-	.	ID=gene-C9E97_RS22550;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=C9E97_RS22550;old_locus_tag=C9E97_23085
NZ_PYKA01000136.1	Protein Homology	CDS	40364	41983	.	-	0	ID=cds-WP_001265689.1;Parent=gene-C9E97_RS22550;Dbxref=GenBank:WP_001265689.1;Name=WP_001265689.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462403.2;locus_tag=C9E97_RS22550;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_001265689.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	42363	44072	.	+	.	ID=gene-C9E97_RS22555;Name=C9E97_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22555;old_locus_tag=C9E97_23090
NZ_PYKA01000136.1	Protein Homology	CDS	42363	44072	.	+	0	ID=cds-WP_135369363.1;Parent=gene-C9E97_RS22555;Dbxref=GenBank:WP_135369363.1;Name=WP_135369363.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462402.1;locus_tag=C9E97_RS22555;product=DUF4153 domain-containing protein;protein_id=WP_135369363.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	44183	45061	.	-	.	ID=gene-C9E97_RS22560;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=C9E97_RS22560;old_locus_tag=C9E97_23095
NZ_PYKA01000136.1	Protein Homology	CDS	44183	45061	.	-	0	ID=cds-WP_001135571.1;Parent=gene-C9E97_RS22560;Dbxref=GenBank:WP_001135571.1;Name=WP_001135571.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=C9E97_RS22560;product=Hsp33 family molecular chaperone HslO;protein_id=WP_001135571.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	45086	45487	.	-	.	ID=gene-C9E97_RS22565;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=C9E97_RS22565;old_locus_tag=C9E97_23100
NZ_PYKA01000136.1	Protein Homology	CDS	45086	45487	.	-	0	ID=cds-WP_001620580.1;Parent=gene-C9E97_RS22565;Dbxref=GenBank:WP_001620580.1;Name=WP_001620580.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462400.1;locus_tag=C9E97_RS22565;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_001620580.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	45498	46166	.	-	.	ID=gene-C9E97_RS22570;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=C9E97_RS22570;old_locus_tag=C9E97_23105
NZ_PYKA01000136.1	Protein Homology	CDS	45498	46166	.	-	0	ID=cds-WP_135369362.1;Parent=gene-C9E97_RS22570;Dbxref=GenBank:WP_135369362.1;Name=WP_135369362.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462399.1;locus_tag=C9E97_RS22570;product=GMP/IMP nucleotidase;protein_id=WP_135369362.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	46231	48363	.	-	.	ID=gene-C9E97_RS22575;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=C9E97_RS22575;old_locus_tag=C9E97_23110
NZ_PYKA01000136.1	Protein Homology	CDS	46231	48363	.	-	0	ID=cds-WP_021000848.1;Parent=gene-C9E97_RS22575;Dbxref=GenBank:WP_021000848.1;Name=WP_021000848.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462398.1;locus_tag=C9E97_RS22575;product=intracellular growth attenuator protein IgaA;protein_id=WP_021000848.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	48686	49249	.	+	.	ID=gene-C9E97_RS22580;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=C9E97_RS22580;old_locus_tag=C9E97_23115
NZ_PYKA01000136.1	Protein Homology	CDS	48686	49249	.	+	0	ID=cds-WP_000045725.1;Parent=gene-C9E97_RS22580;Dbxref=GenBank:WP_000045725.1;Name=WP_000045725.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000045725.1;locus_tag=C9E97_RS22580;product=ADP compounds hydrolase NudE;protein_id=WP_000045725.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	49345	51897	.	-	.	ID=gene-C9E97_RS22585;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=C9E97_RS22585;old_locus_tag=C9E97_23120
NZ_PYKA01000136.1	Protein Homology	CDS	49345	51897	.	-	0	ID=cds-WP_000673819.1;Parent=gene-C9E97_RS22585;Dbxref=GenBank:WP_000673819.1;Name=WP_000673819.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=C9E97_RS22585;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_000673819.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	52018	52797	.	+	.	ID=gene-C9E97_RS22590;Name=C9E97_RS22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22590;old_locus_tag=C9E97_23125
NZ_PYKA01000136.1	Protein Homology	CDS	52018	52797	.	+	0	ID=cds-WP_135369361.1;Parent=gene-C9E97_RS22590;Dbxref=GenBank:WP_135369361.1;Name=WP_135369361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462395.1;locus_tag=C9E97_RS22590;product=DNA utilization protein HofM;protein_id=WP_135369361.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	52797	53336	.	+	.	ID=gene-C9E97_RS22595;Name=C9E97_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22595;old_locus_tag=C9E97_23130
NZ_PYKA01000136.1	Protein Homology	CDS	52797	53336	.	+	0	ID=cds-WP_000951390.1;Parent=gene-C9E97_RS22595;Dbxref=GenBank:WP_000951390.1;Name=WP_000951390.1;Ontology_term=GO:0043107,GO:0043683;gbkey=CDS;go_process=type IV pilus-dependent motility|0043107||IEA,type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462394.1;locus_tag=C9E97_RS22595;product=PilN domain-containing protein;protein_id=WP_000951390.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	53320	53793	.	+	.	ID=gene-C9E97_RS22600;Name=C9E97_RS22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22600;old_locus_tag=C9E97_23135
NZ_PYKA01000136.1	Protein Homology	CDS	53320	53793	.	+	0	ID=cds-WP_023209906.1;Parent=gene-C9E97_RS22600;Dbxref=GenBank:WP_023209906.1;Name=WP_023209906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462393.1;locus_tag=C9E97_RS22600;product=hypothetical protein;protein_id=WP_023209906.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	53783	54184	.	+	.	ID=gene-C9E97_RS22605;Name=C9E97_RS22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22605;old_locus_tag=C9E97_23140
NZ_PYKA01000136.1	Protein Homology	CDS	53783	54184	.	+	0	ID=cds-WP_000648140.1;Parent=gene-C9E97_RS22605;Dbxref=GenBank:WP_000648140.1;Name=WP_000648140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462392.1;locus_tag=C9E97_RS22605;product=HofP DNA utilization family protein;protein_id=WP_000648140.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	54099	55337	.	+	.	ID=gene-C9E97_RS22610;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=C9E97_RS22610;old_locus_tag=C9E97_23145
NZ_PYKA01000136.1	Protein Homology	CDS	54099	55337	.	+	0	ID=cds-WP_135369360.1;Parent=gene-C9E97_RS22610;Dbxref=GenBank:WP_135369360.1;Name=WP_135369360.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462391.1;locus_tag=C9E97_RS22610;product=DNA uptake porin HofQ;protein_id=WP_135369360.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	55802	56323	.	+	.	ID=gene-C9E97_RS22620;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=C9E97_RS22620;old_locus_tag=C9E97_23155
NZ_PYKA01000136.1	Protein Homology	CDS	55802	56323	.	+	0	ID=cds-WP_000818621.1;Parent=gene-C9E97_RS22620;Dbxref=GenBank:WP_000818621.1;Name=WP_000818621.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=C9E97_RS22620;product=shikimate kinase AroK;protein_id=WP_000818621.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	56380	57468	.	+	.	ID=gene-C9E97_RS22625;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=C9E97_RS22625;old_locus_tag=C9E97_23160
NZ_PYKA01000136.1	Protein Homology	CDS	56380	57468	.	+	0	ID=cds-WP_135369359.1;Parent=gene-C9E97_RS22625;Dbxref=GenBank:WP_135369359.1;Name=WP_135369359.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462389.1;locus_tag=C9E97_RS22625;product=3-dehydroquinate synthase;protein_id=WP_135369359.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	57566	58843	.	+	.	ID=gene-C9E97_RS22630;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=C9E97_RS22630;old_locus_tag=C9E97_23165
NZ_PYKA01000136.1	Protein Homology	CDS	57566	58843	.	+	0	ID=cds-WP_135369358.1;Parent=gene-C9E97_RS22630;Dbxref=GenBank:WP_135369358.1;Name=WP_135369358.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462388.1;locus_tag=C9E97_RS22630;product=cell division protein DamX;protein_id=WP_135369358.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	59024	59860	.	+	.	ID=gene-C9E97_RS22635;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=C9E97_RS22635;old_locus_tag=C9E97_23170
NZ_PYKA01000136.1	Protein Homology	CDS	59024	59860	.	+	0	ID=cds-WP_000742132.1;Parent=gene-C9E97_RS22635;Dbxref=GenBank:WP_000742132.1;Name=WP_000742132.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462387.1;locus_tag=C9E97_RS22635;product=adenine-specific DNA-methyltransferase;protein_id=WP_000742132.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	59878	60555	.	+	.	ID=gene-C9E97_RS22640;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=C9E97_RS22640;old_locus_tag=C9E97_23175
NZ_PYKA01000136.1	Protein Homology	CDS	59878	60555	.	+	0	ID=cds-WP_000816287.1;Parent=gene-C9E97_RS22640;Dbxref=GenBank:WP_000816287.1;Name=WP_000816287.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462386.1;locus_tag=C9E97_RS22640;product=ribulose-phosphate 3-epimerase;protein_id=WP_000816287.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	60548	61306	.	+	.	ID=gene-C9E97_RS22645;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=C9E97_RS22645;old_locus_tag=C9E97_23180
NZ_PYKA01000136.1	Protein Homology	CDS	60548	61306	.	+	0	ID=cds-WP_135369357.1;Parent=gene-C9E97_RS22645;Dbxref=GenBank:WP_135369357.1;Name=WP_135369357.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462385.1;locus_tag=C9E97_RS22645;product=phosphoglycolate phosphatase;protein_id=WP_135369357.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	61299	62303	.	+	.	ID=gene-C9E97_RS22650;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=C9E97_RS22650;old_locus_tag=C9E97_23185
NZ_PYKA01000136.1	Protein Homology	CDS	61299	62303	.	+	0	ID=cds-WP_000165562.1;Parent=gene-C9E97_RS22650;Dbxref=GenBank:WP_000165562.1;Name=WP_000165562.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462384.1;locus_tag=C9E97_RS22650;product=tryptophan--tRNA ligase;protein_id=WP_000165562.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	62448	62618	.	-	.	ID=gene-C9E97_RS22655;Name=C9E97_RS22655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22655;old_locus_tag=C9E97_23190
NZ_PYKA01000136.1	Protein Homology	CDS	62448	62618	.	-	0	ID=cds-WP_000472323.1;Parent=gene-C9E97_RS22655;Dbxref=GenBank:WP_000472323.1;Name=WP_000472323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462383.1;locus_tag=C9E97_RS22655;product=YhfL family protein;protein_id=WP_000472323.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	62811	68540	.	-	.	ID=gene-C9E97_RS22660;Name=C9E97_RS22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22660;old_locus_tag=C9E97_23195
NZ_PYKA01000136.1	Protein Homology	CDS	62811	68540	.	-	0	ID=cds-WP_432431257.1;Parent=gene-C9E97_RS22660;Dbxref=GenBank:WP_432431257.1;Name=WP_432431257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001663097.1;locus_tag=C9E97_RS22660;product=autotransporter adhesin BigA;protein_id=WP_432431257.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	68869	70242	.	-	.	ID=gene-C9E97_RS22665;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=C9E97_RS22665;old_locus_tag=C9E97_23200
NZ_PYKA01000136.1	Protein Homology	CDS	68869	70242	.	-	0	ID=cds-WP_000349897.1;Parent=gene-C9E97_RS22665;Dbxref=GenBank:WP_000349897.1;Name=WP_000349897.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462380.1;locus_tag=C9E97_RS22665;product=siroheme synthase CysG;protein_id=WP_000349897.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	70254	71063	.	-	.	ID=gene-C9E97_RS22670;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=C9E97_RS22670;old_locus_tag=C9E97_23205
NZ_PYKA01000136.1	Protein Homology	CDS	70254	71063	.	-	0	ID=cds-WP_000493576.1;Parent=gene-C9E97_RS22670;Dbxref=GenBank:WP_000493576.1;Name=WP_000493576.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462379.1;locus_tag=C9E97_RS22670;product=nitrite transporter NirC;protein_id=WP_000493576.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	71247	71573	.	-	.	ID=gene-C9E97_RS22675;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=C9E97_RS22675;old_locus_tag=C9E97_23210
NZ_PYKA01000136.1	Protein Homology	CDS	71247	71573	.	-	0	ID=cds-WP_135369146.1;Parent=gene-C9E97_RS22675;Dbxref=GenBank:WP_135369146.1;Name=WP_135369146.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462378.1;locus_tag=C9E97_RS22675;product=nitrite reductase small subunit NirD;protein_id=WP_135369146.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	71570	74113	.	-	.	ID=gene-C9E97_RS22680;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=C9E97_RS22680;old_locus_tag=C9E97_23215
NZ_PYKA01000136.1	Protein Homology	CDS	71570	74113	.	-	0	ID=cds-WP_000049247.1;Parent=gene-C9E97_RS22680;Dbxref=GenBank:WP_000049247.1;Name=WP_000049247.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=C9E97_RS22680;product=NADPH-nitrite reductase large subunit;protein_id=WP_000049247.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	74430	75611	.	-	.	ID=gene-C9E97_RS22685;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=C9E97_RS22685;old_locus_tag=C9E97_23220
NZ_PYKA01000136.1	Protein Homology	CDS	74430	75611	.	-	0	ID=cds-WP_000185211.1;Parent=gene-C9E97_RS22685;Dbxref=GenBank:WP_000185211.1;Name=WP_000185211.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462376.1;locus_tag=C9E97_RS22685;product=MFS transporter TsgA;protein_id=WP_000185211.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	75888	76460	.	+	.	ID=gene-C9E97_RS22690;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=C9E97_RS22690;old_locus_tag=C9E97_23225
NZ_PYKA01000136.1	Protein Homology	CDS	75888	76460	.	+	0	ID=cds-WP_000920482.1;Parent=gene-C9E97_RS22690;Dbxref=GenBank:WP_000920482.1;Name=WP_000920482.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462375.1;locus_tag=C9E97_RS22690;product=peptidylprolyl isomerase A;protein_id=WP_000920482.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	76569	76736	.	+	.	ID=gene-C9E97_RS22695;Name=C9E97_RS22695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22695;old_locus_tag=C9E97_23230
NZ_PYKA01000136.1	Protein Homology	CDS	76569	76736	.	+	0	ID=cds-WP_001620545.1;Parent=gene-C9E97_RS22695;Dbxref=GenBank:WP_001620545.1;Name=WP_001620545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462374.1;locus_tag=C9E97_RS22695;product=YhfG family protein;protein_id=WP_001620545.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	76726	77328	.	+	.	ID=gene-C9E97_RS22700;Name=C9E97_RS22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22700;old_locus_tag=C9E97_23235
NZ_PYKA01000136.1	Protein Homology	CDS	76726	77328	.	+	0	ID=cds-WP_135369145.1;Parent=gene-C9E97_RS22700;Dbxref=GenBank:WP_135369145.1;Name=WP_135369145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462373.1;locus_tag=C9E97_RS22700;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_135369145.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	77360	77923	.	+	.	ID=gene-C9E97_RS22705;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=C9E97_RS22705;old_locus_tag=C9E97_23240
NZ_PYKA01000136.1	Protein Homology	CDS	77360	77923	.	+	0	ID=cds-WP_000601878.1;Parent=gene-C9E97_RS22705;Dbxref=GenBank:WP_000601878.1;Name=WP_000601878.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462372.1;locus_tag=C9E97_RS22705;product=aminodeoxychorismate synthase component 2;protein_id=WP_000601878.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	78009	79226	.	+	.	ID=gene-C9E97_RS22710;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=C9E97_RS22710;old_locus_tag=C9E97_23245
NZ_PYKA01000136.1	Protein Homology	CDS	78009	79226	.	+	0	ID=cds-WP_000190023.1;Parent=gene-C9E97_RS22710;Dbxref=GenBank:WP_000190023.1;Name=WP_000190023.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462371.1;locus_tag=C9E97_RS22710;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_000190023.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	79269	81356	.	-	.	ID=gene-C9E97_RS22715;Name=C9E97_RS22715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22715;old_locus_tag=C9E97_23250
NZ_PYKA01000136.1	Protein Homology	CDS	79269	81356	.	-	0	ID=cds-WP_000269311.1;Parent=gene-C9E97_RS22715;Dbxref=GenBank:WP_000269311.1;Name=WP_000269311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462370.1;locus_tag=C9E97_RS22715;product=YccS/YhfK family putative transporter;protein_id=WP_000269311.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	81405	82037	.	-	.	ID=gene-C9E97_RS22720;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=C9E97_RS22720;old_locus_tag=C9E97_23255
NZ_PYKA01000136.1	Protein Homology	CDS	81405	82037	.	-	0	ID=cds-WP_000242758.1;Parent=gene-C9E97_RS22720;Dbxref=GenBank:WP_000242758.1;Name=WP_000242758.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=C9E97_RS22720;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242758.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	82345	82749	.	+	.	ID=gene-C9E97_RS22725;Name=C9E97_RS22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22725;old_locus_tag=C9E97_23260
NZ_PYKA01000136.1	Protein Homology	CDS	82345	82749	.	+	0	ID=cds-WP_001148919.1;Parent=gene-C9E97_RS22725;Dbxref=GenBank:WP_001148919.1;Name=WP_001148919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462368.1;locus_tag=C9E97_RS22725;product=OsmC family protein;protein_id=WP_001148919.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	82845	83714	.	-	.	ID=gene-C9E97_RS22730;Name=C9E97_RS22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22730;old_locus_tag=C9E97_23265
NZ_PYKA01000136.1	Protein Homology	CDS	82845	83714	.	-	0	ID=cds-WP_001274690.1;Parent=gene-C9E97_RS22730;Dbxref=GenBank:WP_001274690.1;Name=WP_001274690.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462367.1;locus_tag=C9E97_RS22730;product=phosphoribulokinase;protein_id=WP_001274690.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	83766	83984	.	-	.	ID=gene-C9E97_RS22735;Name=C9E97_RS22735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22735;old_locus_tag=C9E97_23270
NZ_PYKA01000136.1	Protein Homology	CDS	83766	83984	.	-	0	ID=cds-WP_000586568.1;Parent=gene-C9E97_RS22735;Dbxref=GenBank:WP_000586568.1;Name=WP_000586568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=C9E97_RS22735;product=YheU family protein;protein_id=WP_000586568.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	83981	85048	.	-	.	ID=gene-C9E97_RS22740;Name=C9E97_RS22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22740;old_locus_tag=C9E97_23275
NZ_PYKA01000136.1	Protein Homology	CDS	83981	85048	.	-	0	ID=cds-WP_001214109.1;Parent=gene-C9E97_RS22740;Dbxref=GenBank:WP_001214109.1;Name=WP_001214109.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462365.1;locus_tag=C9E97_RS22740;product=hydrolase;protein_id=WP_001214109.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	85246	85557	.	+	.	ID=gene-C9E97_RS22745;Name=C9E97_RS22745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22745;old_locus_tag=C9E97_23280
NZ_PYKA01000136.1	Protein Homology	CDS	85246	85557	.	+	0	ID=cds-WP_000047689.1;Parent=gene-C9E97_RS22745;Dbxref=GenBank:WP_000047689.1;Name=WP_000047689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462364.1;locus_tag=C9E97_RS22745;product=monooxygenase;protein_id=WP_000047689.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	85559	85780	.	-	.	ID=gene-C9E97_RS22750;Name=C9E97_RS22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22750;old_locus_tag=C9E97_23285
NZ_PYKA01000136.1	Protein Homology	CDS	85559	85780	.	-	0	ID=cds-WP_001582875.1;Parent=gene-C9E97_RS22750;Dbxref=GenBank:WP_001582875.1;Name=WP_001582875.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054026.1;locus_tag=C9E97_RS22750;product=helix-turn-helix domain-containing protein;protein_id=WP_001582875.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	85819	87726	.	-	.	ID=gene-C9E97_RS22755;Name=C9E97_RS22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22755;old_locus_tag=C9E97_23290
NZ_PYKA01000136.1	Protein Homology	CDS	85819	87726	.	-	0	ID=cds-WP_000634764.1;Parent=gene-C9E97_RS22755;Dbxref=GenBank:WP_000634764.1;Name=WP_000634764.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462363.1;locus_tag=C9E97_RS22755;product=ABC transporter ATP-binding protein;protein_id=WP_000634764.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	87992	88543	.	+	.	ID=gene-C9E97_RS22760;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=C9E97_RS22760;old_locus_tag=C9E97_23295
NZ_PYKA01000136.1	Protein Homology	CDS	87992	88543	.	+	0	ID=cds-WP_000081820.1;Parent=gene-C9E97_RS22760;Dbxref=GenBank:WP_000081820.1;Name=WP_000081820.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462362.1;locus_tag=C9E97_RS22760;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_000081820.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	88543	90348	.	+	.	ID=gene-C9E97_RS22765;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=C9E97_RS22765;old_locus_tag=C9E97_23300
NZ_PYKA01000136.1	Protein Homology	CDS	88543	90348	.	+	0	ID=cds-WP_000398133.1;Parent=gene-C9E97_RS22765;Dbxref=GenBank:WP_000398133.1;Name=WP_000398133.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462361.1;locus_tag=C9E97_RS22765;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_000398133.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	90359	90559	.	+	.	ID=gene-C9E97_RS22770;Name=C9E97_RS22770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22770;old_locus_tag=C9E97_23305
NZ_PYKA01000136.1	Protein Homology	CDS	90359	90559	.	+	0	ID=cds-WP_001007735.1;Parent=gene-C9E97_RS22770;Dbxref=GenBank:WP_001007735.1;Name=WP_001007735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462360.1;locus_tag=C9E97_RS22770;product=YheV family putative zinc ribbon protein;protein_id=WP_001007735.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	90654	91244	.	+	.	ID=gene-C9E97_RS22775;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=C9E97_RS22775;old_locus_tag=C9E97_23310
NZ_PYKA01000136.1	Protein Homology	CDS	90654	91244	.	+	0	ID=cds-WP_000861341.1;Parent=gene-C9E97_RS22775;Dbxref=GenBank:WP_000861341.1;Name=WP_000861341.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462359.1;locus_tag=C9E97_RS22775;product=peptidylprolyl isomerase;protein_id=WP_000861341.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	91433	91651	.	-	.	ID=gene-C9E97_RS22780;Name=C9E97_RS22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22780;old_locus_tag=C9E97_23320
NZ_PYKA01000136.1	Protein Homology	CDS	91433	91651	.	-	0	ID=cds-WP_001152701.1;Parent=gene-C9E97_RS22780;Dbxref=GenBank:WP_001152701.1;Name=WP_001152701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462358.1;locus_tag=C9E97_RS22780;product=protein SlyX;protein_id=WP_001152701.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	91871	92689	.	+	.	ID=gene-C9E97_RS22785;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=C9E97_RS22785;old_locus_tag=C9E97_23325
NZ_PYKA01000136.1	Protein Homology	CDS	91871	92689	.	+	0	ID=cds-WP_000838222.1;Parent=gene-C9E97_RS22785;Dbxref=GenBank:WP_000838222.1;Name=WP_000838222.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462357.1;locus_tag=C9E97_RS22785;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000838222.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	92966	93688	.	+	.	ID=gene-C9E97_RS22790;Name=C9E97_RS22790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22790;old_locus_tag=C9E97_23330
NZ_PYKA01000136.1	Protein Homology	CDS	92966	93688	.	+	0	ID=cds-WP_000091471.1;Parent=gene-C9E97_RS22790;Dbxref=GenBank:WP_000091471.1;Name=WP_000091471.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462356.1;locus_tag=C9E97_RS22790;product=helix-turn-helix transcriptional regulator;protein_id=WP_000091471.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	93688	94074	.	+	.	ID=gene-C9E97_RS22795;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=C9E97_RS22795;old_locus_tag=C9E97_23335
NZ_PYKA01000136.1	Protein Homology	CDS	93688	94074	.	+	0	ID=cds-WP_001268011.1;Parent=gene-C9E97_RS22795;Dbxref=GenBank:WP_001268011.1;Name=WP_001268011.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462355.1;locus_tag=C9E97_RS22795;product=sulfurtransferase complex subunit TusD;protein_id=WP_001268011.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	94074	94430	.	+	.	ID=gene-C9E97_RS22800;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=C9E97_RS22800;old_locus_tag=C9E97_23340
NZ_PYKA01000136.1	Protein Homology	CDS	94074	94430	.	+	0	ID=cds-WP_023250746.1;Parent=gene-C9E97_RS22800;Dbxref=GenBank:WP_023250746.1;Name=WP_023250746.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462354.1;locus_tag=C9E97_RS22800;product=sulfurtransferase complex subunit TusC;protein_id=WP_023250746.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	94438	94725	.	+	.	ID=gene-C9E97_RS22805;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=C9E97_RS22805;old_locus_tag=C9E97_23345
NZ_PYKA01000136.1	Protein Homology	CDS	94438	94725	.	+	0	ID=cds-WP_000903398.1;Parent=gene-C9E97_RS22805;Dbxref=GenBank:WP_000903398.1;Name=WP_000903398.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462353.1;locus_tag=C9E97_RS22805;product=sulfurtransferase complex subunit TusB;protein_id=WP_000903398.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	94851	95225	.	+	.	ID=gene-C9E97_RS22810;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=C9E97_RS22810;old_locus_tag=C9E97_23350
NZ_PYKA01000136.1	Protein Homology	CDS	94851	95225	.	+	0	ID=cds-WP_000246815.1;Parent=gene-C9E97_RS22810;Dbxref=GenBank:WP_000246815.1;Name=WP_000246815.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=C9E97_RS22810;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	95321	95791	.	+	.	ID=gene-C9E97_RS22815;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=C9E97_RS22815;old_locus_tag=C9E97_23355
NZ_PYKA01000136.1	Protein Homology	CDS	95321	95791	.	+	0	ID=cds-WP_001138043.1;Parent=gene-C9E97_RS22815;Dbxref=GenBank:WP_001138043.1;Name=WP_001138043.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=C9E97_RS22815;product=30S ribosomal protein S7;protein_id=WP_001138043.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	95888	98002	.	+	.	ID=gene-C9E97_RS22820;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=C9E97_RS22820;old_locus_tag=C9E97_23360
NZ_PYKA01000136.1	Protein Homology	CDS	95888	98002	.	+	0	ID=cds-WP_000124693.1;Parent=gene-C9E97_RS22820;Dbxref=GenBank:WP_000124693.1;Name=WP_000124693.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=C9E97_RS22820;product=elongation factor G;protein_id=WP_000124693.1;transl_table=11
NZ_PYKA01000136.1	RefSeq	gene	98074	98263	.	+	.	ID=gene-C9E97_RS22825;Name=C9E97_RS22825;end_range=98263,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22825;old_locus_tag=C9E97_23365;partial=true
NZ_PYKA01000136.1	Protein Homology	CDS	98074	98263	.	+	0	ID=cds-WP_021498352.1;Parent=gene-C9E97_RS22825;Dbxref=GenBank:WP_021498352.1;Name=WP_021498352.1;Ontology_term=GO:0003924,GO:0005525;end_range=98263,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=C9E97_RS22825;partial=true;product=GTP-binding protein;protein_id=WP_021498352.1;transl_table=11
##sequence-region NZ_PYKA01000027.1 1 842
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000027.1	RefSeq	region	1	842	.	+	.	ID=NZ_PYKA01000027.1:1..842;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000027.1	RefSeq	pseudogene	1	842	.	+	.	ID=gene-C9E97_RS03305;Name=C9E97_RS03305;end_range=842,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS03305;old_locus_tag=C9E97_03410;partial=true;pseudo=true;start_range=.,1
NZ_PYKA01000027.1	Protein Homology	CDS	1	842	.	+	0	ID=cds-C9E97_RS03305;Parent=gene-C9E97_RS03305;Note=catalyzes the formation of pyruvate from oxaloacetate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=842,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9E97_RS03305;partial=true;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKA01000074.1 1 722
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000074.1	RefSeq	region	1	722	.	+	.	ID=NZ_PYKA01000074.1:1..722;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000074.1	RefSeq	pseudogene	1	722	.	+	.	ID=gene-C9E97_RS10760;Name=C9E97_RS10760;end_range=722,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS10760;old_locus_tag=C9E97_11005;partial=true;pseudo=true;start_range=.,1
NZ_PYKA01000074.1	Protein Homology	CDS	1	722	.	+	0	ID=cds-C9E97_RS10760;Parent=gene-C9E97_RS10760;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=722,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461178.1;locus_tag=C9E97_RS10760;partial=true;product=phage tail protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKA01000017.1 1 662
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000017.1	RefSeq	region	1	662	.	+	.	ID=NZ_PYKA01000017.1:1..662;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000017.1	RefSeq	gene	1	540	.	-	.	ID=gene-C9E97_RS01195;Name=C9E97_RS01195;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9E97_RS01195;old_locus_tag=C9E97_01215;partial=true;start_range=.,1
NZ_PYKA01000017.1	cmsearch	rRNA	1	540	.	-	.	ID=rna-C9E97_RS01195;Parent=gene-C9E97_RS01195;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS01195;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_PYKA01000017.1	cmsearch	exon	1	540	.	-	.	ID=exon-C9E97_RS01195-1;Parent=rna-C9E97_RS01195;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS01195;partial=true;product=23S ribosomal RNA;start_range=.,1
##sequence-region NZ_PYKA01000040.1 1 617
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000040.1	RefSeq	region	1	617	.	+	.	ID=NZ_PYKA01000040.1:1..617;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000040.1	RefSeq	gene	1	617	.	+	.	ID=gene-C9E97_RS04960;Name=C9E97_RS04960;end_range=617,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9E97_RS04960;old_locus_tag=C9E97_05090;partial=true;start_range=.,1
NZ_PYKA01000040.1	cmsearch	rRNA	1	617	.	+	.	ID=rna-C9E97_RS04960;Parent=gene-C9E97_RS04960;Dbxref=RFAM:RF02541;end_range=617,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS04960;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_PYKA01000040.1	cmsearch	exon	1	617	.	+	.	ID=exon-C9E97_RS04960-1;Parent=rna-C9E97_RS04960;Dbxref=RFAM:RF02541;end_range=617,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS04960;partial=true;product=23S ribosomal RNA;start_range=.,1
##sequence-region NZ_PYKA01000011.1 1 592
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000011.1	RefSeq	region	1	592	.	+	.	ID=NZ_PYKA01000011.1:1..592;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000011.1	RefSeq	gene	1	592	.	-	.	ID=gene-C9E97_RS00395;Name=C9E97_RS00395;end_range=592,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00395;old_locus_tag=C9E97_00405;partial=true;start_range=.,1
NZ_PYKA01000011.1	Protein Homology	CDS	1	592	.	-	0	ID=cds-WP_210115370.1;Parent=gene-C9E97_RS00395;Dbxref=GenBank:WP_210115370.1;Name=WP_210115370.1;end_range=592,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835061.1;locus_tag=C9E97_RS00395;partial=true;product=autotransporter-associated beta strand repeat-containing protein;protein_id=WP_210115370.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKA01000101.1 1 591
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000101.1	RefSeq	region	1	591	.	+	.	ID=NZ_PYKA01000101.1:1..591;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000101.1	RefSeq	gene	1	209	.	+	.	ID=gene-C9E97_RS13875;Name=C9E97_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13875;old_locus_tag=C9E97_14175;partial=true;start_range=.,1
NZ_PYKA01000101.1	Protein Homology	CDS	1	209	.	+	2	ID=cds-WP_079785584.1;Parent=gene-C9E97_RS13875;Dbxref=GenBank:WP_079785584.1;Name=WP_079785584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459746.1;locus_tag=C9E97_RS13875;partial=true;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_079785584.1;start_range=.,1;transl_table=11
NZ_PYKA01000101.1	RefSeq	pseudogene	225	591	.	+	.	ID=gene-C9E97_RS13880;Name=C9E97_RS13880;end_range=591,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS13880;old_locus_tag=C9E97_14180;partial=true;pseudo=true
NZ_PYKA01000101.1	Protein Homology	CDS	225	591	.	+	0	ID=cds-C9E97_RS13880;Parent=gene-C9E97_RS13880;Note=catalyzes the formation of pyruvate from oxaloacetate%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=591,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9E97_RS13880;partial=true;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;pseudo=true;transl_table=11
##sequence-region NZ_PYKA01000069.1 1 522
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000069.1	RefSeq	region	1	522	.	+	.	ID=NZ_PYKA01000069.1:1..522;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000069.1	RefSeq	gene	1	522	.	-	.	ID=gene-C9E97_RS10310;Name=C9E97_RS10310;end_range=522,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10310;old_locus_tag=C9E97_10530;partial=true;start_range=.,1
NZ_PYKA01000069.1	Protein Homology	CDS	1	522	.	-	2	ID=cds-WP_210115374.1;Parent=gene-C9E97_RS10310;Dbxref=GenBank:WP_210115374.1;Name=WP_210115374.1;end_range=522,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044775.1;locus_tag=C9E97_RS10310;partial=true;product=autotransporter-associated beta strand repeat-containing protein;protein_id=WP_210115374.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKA01000092.1 1 493
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000092.1	RefSeq	region	1	493	.	+	.	ID=NZ_PYKA01000092.1:1..493;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000092.1	RefSeq	gene	1	69	.	-	.	ID=gene-C9E97_RS12280;Name=C9E97_RS12280;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E97_RS12280;old_locus_tag=C9E97_12565;partial=true;start_range=.,1
NZ_PYKA01000092.1	cmsearch	ncRNA	1	69	.	-	.	ID=rna-C9E97_RS12280;Parent=gene-C9E97_RS12280;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS12280;partial=true;product=RtT sRNA;start_range=.,1
NZ_PYKA01000092.1	cmsearch	exon	1	69	.	-	.	ID=exon-C9E97_RS12280-1;Parent=rna-C9E97_RS12280;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS12280;partial=true;product=RtT sRNA;start_range=.,1
NZ_PYKA01000092.1	RefSeq	gene	113	197	.	-	.	ID=gene-C9E97_RS12285;Name=C9E97_RS12285;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS12285;old_locus_tag=C9E97_12570
NZ_PYKA01000092.1	tRNAscan-SE	tRNA	113	197	.	-	.	ID=rna-C9E97_RS12285;Parent=gene-C9E97_RS12285;anticodon=(pos:complement(161..163));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS12285;product=tRNA-Tyr
NZ_PYKA01000092.1	tRNAscan-SE	exon	113	197	.	-	.	ID=exon-C9E97_RS12285-1;Parent=rna-C9E97_RS12285;anticodon=(pos:complement(161..163));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS12285;product=tRNA-Tyr
NZ_PYKA01000092.1	RefSeq	gene	232	363	.	-	.	ID=gene-C9E97_RS12290;Name=C9E97_RS12290;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E97_RS12290;old_locus_tag=C9E97_12575
NZ_PYKA01000092.1	cmsearch	ncRNA	232	363	.	-	.	ID=rna-C9E97_RS12290;Parent=gene-C9E97_RS12290;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS12290;product=RtT sRNA
NZ_PYKA01000092.1	cmsearch	exon	232	363	.	-	.	ID=exon-C9E97_RS12290-1;Parent=rna-C9E97_RS12290;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS12290;product=RtT sRNA
NZ_PYKA01000092.1	RefSeq	gene	408	492	.	-	.	ID=gene-C9E97_RS12295;Name=C9E97_RS12295;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS12295;old_locus_tag=C9E97_12580
NZ_PYKA01000092.1	tRNAscan-SE	tRNA	408	492	.	-	.	ID=rna-C9E97_RS12295;Parent=gene-C9E97_RS12295;anticodon=(pos:complement(456..458));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS12295;product=tRNA-Tyr
NZ_PYKA01000092.1	tRNAscan-SE	exon	408	492	.	-	.	ID=exon-C9E97_RS12295-1;Parent=rna-C9E97_RS12295;anticodon=(pos:complement(456..458));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS12295;product=tRNA-Tyr
##sequence-region NZ_PYKA01000008.1 1 454
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000008.1	RefSeq	region	1	454	.	+	.	ID=NZ_PYKA01000008.1:1..454;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000008.1	RefSeq	gene	76	152	.	+	.	ID=gene-C9E97_RS00310;Name=C9E97_RS00310;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS00310;old_locus_tag=C9E97_00320
NZ_PYKA01000008.1	tRNAscan-SE	tRNA	76	152	.	+	.	ID=rna-C9E97_RS00310;Parent=gene-C9E97_RS00310;anticodon=(pos:110..112);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS00310;product=tRNA-Ile
NZ_PYKA01000008.1	tRNAscan-SE	exon	76	152	.	+	.	ID=exon-C9E97_RS00310-1;Parent=rna-C9E97_RS00310;anticodon=(pos:110..112);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS00310;product=tRNA-Ile
NZ_PYKA01000008.1	RefSeq	gene	264	339	.	+	.	ID=gene-C9E97_RS00315;Name=C9E97_RS00315;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS00315;old_locus_tag=C9E97_00325
NZ_PYKA01000008.1	tRNAscan-SE	tRNA	264	339	.	+	.	ID=rna-C9E97_RS00315;Parent=gene-C9E97_RS00315;anticodon=(pos:297..299);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS00315;product=tRNA-Ala
NZ_PYKA01000008.1	tRNAscan-SE	exon	264	339	.	+	.	ID=exon-C9E97_RS00315-1;Parent=rna-C9E97_RS00315;anticodon=(pos:297..299);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS00315;product=tRNA-Ala
##sequence-region NZ_PYKA01000042.1 1 97799
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000042.1	RefSeq	region	1	97799	.	+	.	ID=NZ_PYKA01000042.1:1..97799;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000042.1	RefSeq	gene	1	2411	.	-	.	ID=gene-C9E97_RS05280;Name=C9E97_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05280;old_locus_tag=C9E97_05410;partial=true;start_range=.,1
NZ_PYKA01000042.1	Protein Homology	CDS	1	2411	.	-	0	ID=cds-WP_135495705.1;Parent=gene-C9E97_RS05280;Dbxref=GenBank:WP_135495705.1;Name=WP_135495705.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=C9E97_RS05280;partial=true;product=nitrate reductase subunit alpha;protein_id=WP_135495705.1;start_range=.,1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	2503	3891	.	-	.	ID=gene-C9E97_RS05285;Name=C9E97_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05285;old_locus_tag=C9E97_05420
NZ_PYKA01000042.1	Protein Homology	CDS	2503	3891	.	-	0	ID=cds-WP_000198250.1;Parent=gene-C9E97_RS05285;Dbxref=GenBank:WP_000198250.1;Name=WP_000198250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460535.1;locus_tag=C9E97_RS05285;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_000198250.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	4106	4684	.	-	.	ID=gene-C9E97_RS05290;Name=C9E97_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05290;old_locus_tag=C9E97_05425
NZ_PYKA01000042.1	Protein Homology	CDS	4106	4684	.	-	0	ID=cds-WP_000121037.1;Parent=gene-C9E97_RS05290;Dbxref=GenBank:WP_000121037.1;Name=WP_000121037.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460534.1;locus_tag=C9E97_RS05290;product=TetR family transcriptional regulator;protein_id=WP_000121037.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	4802	6289	.	+	.	ID=gene-C9E97_RS05295;Name=smvA;gbkey=Gene;gene=smvA;gene_biotype=protein_coding;locus_tag=C9E97_RS05295;old_locus_tag=C9E97_05430
NZ_PYKA01000042.1	Protein Homology	CDS	4802	6289	.	+	0	ID=cds-WP_000489740.1;Parent=gene-C9E97_RS05295;Dbxref=GenBank:WP_000489740.1;Name=WP_000489740.1;gbkey=CDS;gene=smvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460533.1;locus_tag=C9E97_RS05295;product=methyl viologen efflux MFS transporter SmvA;protein_id=WP_000489740.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	6314	6694	.	-	.	ID=gene-C9E97_RS05300;Name=C9E97_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05300;old_locus_tag=C9E97_05435
NZ_PYKA01000042.1	Protein Homology	CDS	6314	6694	.	-	0	ID=cds-WP_014343841.1;Parent=gene-C9E97_RS05300;Dbxref=GenBank:WP_014343841.1;Name=WP_014343841.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460532.3;locus_tag=C9E97_RS05300;product=GFA family protein;protein_id=WP_014343841.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	6838	7926	.	-	.	ID=gene-C9E97_RS05305;Name=ompD;gbkey=Gene;gene=ompD;gene_biotype=protein_coding;locus_tag=C9E97_RS05305;old_locus_tag=C9E97_05440
NZ_PYKA01000042.1	Protein Homology	CDS	6838	7926	.	-	0	ID=cds-WP_000769035.1;Parent=gene-C9E97_RS05305;Dbxref=GenBank:WP_000769035.1;Name=WP_000769035.1;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=C9E97_RS05305;product=porin OmpD;protein_id=WP_000769035.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	8451	9332	.	-	.	ID=gene-C9E97_RS05315;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=C9E97_RS05315;old_locus_tag=C9E97_05450
NZ_PYKA01000042.1	Protein Homology	CDS	8451	9332	.	-	0	ID=cds-WP_063809242.1;Parent=gene-C9E97_RS05315;Dbxref=GenBank:WP_063809242.1;Name=WP_063809242.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203799.1;locus_tag=C9E97_RS05315;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WP_063809242.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	9610	12657	.	+	.	ID=gene-C9E97_RS05325;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=C9E97_RS05325;old_locus_tag=C9E97_05460
NZ_PYKA01000042.1	Protein Homology	CDS	9610	12657	.	+	0	ID=cds-WP_077684034.1;Parent=gene-C9E97_RS05325;Dbxref=GenBank:WP_077684034.1;Name=WP_077684034.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=C9E97_RS05325;product=formate dehydrogenase-N subunit alpha;protein_id=WP_077684034.1;transl_except=(pos:10195..10197%2Caa:Sec);transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	12671	13555	.	+	.	ID=gene-C9E97_RS05330;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=C9E97_RS05330;old_locus_tag=C9E97_05465
NZ_PYKA01000042.1	Protein Homology	CDS	12671	13555	.	+	0	ID=cds-WP_000061599.1;Parent=gene-C9E97_RS05330;Dbxref=GenBank:WP_000061599.1;Name=WP_000061599.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460528.1;locus_tag=C9E97_RS05330;product=formate dehydrogenase subunit beta;protein_id=WP_000061599.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	13548	14204	.	+	.	ID=gene-C9E97_RS05335;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=C9E97_RS05335;old_locus_tag=C9E97_05470
NZ_PYKA01000042.1	Protein Homology	CDS	13548	14204	.	+	0	ID=cds-WP_000045657.1;Parent=gene-C9E97_RS05335;Dbxref=GenBank:WP_000045657.1;Name=WP_000045657.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460527.1;locus_tag=C9E97_RS05335;product=formate dehydrogenase-N subunit gamma;protein_id=WP_000045657.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	14295	15305	.	-	.	ID=gene-C9E97_RS05340;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=C9E97_RS05340;old_locus_tag=C9E97_05475
NZ_PYKA01000042.1	Protein Homology	CDS	14295	15305	.	-	0	ID=cds-WP_000642447.1;Parent=gene-C9E97_RS05340;Dbxref=GenBank:WP_000642447.1;Name=WP_000642447.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460526.1;locus_tag=C9E97_RS05340;product=alcohol dehydrogenase AdhP;protein_id=WP_000642447.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	15591	17288	.	-	.	ID=gene-C9E97_RS05345;Name=C9E97_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05345;old_locus_tag=C9E97_05480
NZ_PYKA01000042.1	Protein Homology	CDS	15591	17288	.	-	0	ID=cds-WP_000450511.1;Parent=gene-C9E97_RS05345;Dbxref=GenBank:WP_000450511.1;Name=WP_000450511.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=C9E97_RS05345;product=NAD-dependent malic enzyme;protein_id=WP_000450511.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	17465	17608	.	-	.	ID=gene-C9E97_RS05350;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=C9E97_RS05350;old_locus_tag=C9E97_05485
NZ_PYKA01000042.1	Protein Homology	CDS	17465	17608	.	-	0	ID=cds-WP_000841559.1;Parent=gene-C9E97_RS05350;Dbxref=GenBank:WP_000841559.1;Name=WP_000841559.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460524.1;locus_tag=C9E97_RS05350;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841559.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	17703	17918	.	-	.	ID=gene-C9E97_RS05355;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=C9E97_RS05355;old_locus_tag=C9E97_05490
NZ_PYKA01000042.1	Protein Homology	CDS	17703	17918	.	-	0	ID=cds-WP_000495700.1;Parent=gene-C9E97_RS05355;Dbxref=GenBank:WP_000495700.1;Name=WP_000495700.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460523.1;locus_tag=C9E97_RS05355;product=biofilm-dependent modulation protein;protein_id=WP_000495700.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	18430	18861	.	+	.	ID=gene-C9E97_RS05360;Name=C9E97_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05360;old_locus_tag=C9E97_05495
NZ_PYKA01000042.1	Protein Homology	CDS	18430	18861	.	+	0	ID=cds-WP_135369541.1;Parent=gene-C9E97_RS05360;Dbxref=GenBank:WP_135369541.1;Name=WP_135369541.1;Ontology_term=GO:0006972,GO:0006979,GO:0033194,GO:0004601,GO:0051920,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=peroxidase activity|0004601||IEA,peroxiredoxin activity|0051920||IEA;go_process=hyperosmotic response|0006972||IEA,response to oxidative stress|0006979||IEA,response to hydroperoxide|0033194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460522.1;locus_tag=C9E97_RS05360;product=OsmC family protein;protein_id=WP_135369541.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	19212	19541	.	+	.	ID=gene-C9E97_RS05365;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=C9E97_RS05365;old_locus_tag=C9E97_05500
NZ_PYKA01000042.1	Protein Homology	CDS	19212	19541	.	+	0	ID=cds-WP_001032161.1;Parent=gene-C9E97_RS05365;Dbxref=GenBank:WP_001032161.1;Name=WP_001032161.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460521.1;locus_tag=C9E97_RS05365;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001032161.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	19684	20469	.	+	.	ID=gene-C9E97_RS05370;Name=C9E97_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05370;old_locus_tag=C9E97_05505
NZ_PYKA01000042.1	Protein Homology	CDS	19684	20469	.	+	0	ID=cds-WP_000698598.1;Parent=gene-C9E97_RS05370;Dbxref=GenBank:WP_000698598.1;Name=WP_000698598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460520.1;locus_tag=C9E97_RS05370;product=OBAP family protein;protein_id=WP_000698598.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	20598	22382	.	+	.	ID=gene-C9E97_RS05375;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=C9E97_RS05375;old_locus_tag=C9E97_05510
NZ_PYKA01000042.1	Protein Homology	CDS	20598	22382	.	+	0	ID=cds-WP_135369540.1;Parent=gene-C9E97_RS05375;Dbxref=GenBank:WP_135369540.1;Name=WP_135369540.1;Ontology_term=GO:0005992,GO:0033942;gbkey=CDS;gene=treZ;go_function=4-alpha-D-(1->4)-alpha-D-glucanotrehalose trehalohydrolase activity|0033942||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460519.1;locus_tag=C9E97_RS05375;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_135369540.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	22379	24907	.	+	.	ID=gene-C9E97_RS05380;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=C9E97_RS05380;old_locus_tag=C9E97_05515
NZ_PYKA01000042.1	Protein Homology	CDS	22379	24907	.	+	0	ID=cds-WP_135369539.1;Parent=gene-C9E97_RS05380;Dbxref=GenBank:WP_135369539.1;Name=WP_135369539.1;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=C9E97_RS05380;product=malto-oligosyltrehalose synthase;protein_id=WP_135369539.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	24964	27039	.	+	.	ID=gene-C9E97_RS05385;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=C9E97_RS05385;old_locus_tag=C9E97_05520
NZ_PYKA01000042.1	Protein Homology	CDS	24964	27039	.	+	0	ID=cds-WP_135369538.1;Parent=gene-C9E97_RS05385;Dbxref=GenBank:WP_135369538.1;Name=WP_135369538.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460517.1;locus_tag=C9E97_RS05385;product=glycogen debranching protein GlgX;protein_id=WP_135369538.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	27153	28355	.	-	.	ID=gene-C9E97_RS05390;Name=C9E97_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05390;old_locus_tag=C9E97_05525
NZ_PYKA01000042.1	Protein Homology	CDS	27153	28355	.	-	0	ID=cds-WP_135369537.1;Parent=gene-C9E97_RS05390;Dbxref=GenBank:WP_135369537.1;Name=WP_135369537.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460516.1;locus_tag=C9E97_RS05390;product=MalY/PatB family protein;protein_id=WP_135369537.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	28368	29819	.	-	.	ID=gene-C9E97_RS05395;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=C9E97_RS05395;old_locus_tag=C9E97_05530
NZ_PYKA01000042.1	Protein Homology	CDS	28368	29819	.	-	0	ID=cds-WP_017441347.1;Parent=gene-C9E97_RS05395;Dbxref=GenBank:WP_017441347.1;Name=WP_017441347.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460515.1;locus_tag=C9E97_RS05395;product=Na+/H+ antiporter NhaC;protein_id=WP_017441347.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	29963	30970	.	-	.	ID=gene-C9E97_RS05400;Name=C9E97_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05400;old_locus_tag=C9E97_05535
NZ_PYKA01000042.1	Protein Homology	CDS	29963	30970	.	-	0	ID=cds-WP_053445268.1;Parent=gene-C9E97_RS05400;Dbxref=GenBank:WP_053445268.1;Name=WP_053445268.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460514.1;locus_tag=C9E97_RS05400;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_053445268.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	31228	32694	.	+	.	ID=gene-C9E97_RS05405;Name=C9E97_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05405;old_locus_tag=C9E97_05540
NZ_PYKA01000042.1	Protein Homology	CDS	31228	32694	.	+	0	ID=cds-WP_135369536.1;Parent=gene-C9E97_RS05405;Dbxref=GenBank:WP_135369536.1;Name=WP_135369536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460513.1;locus_tag=C9E97_RS05405;product=hypothetical protein;protein_id=WP_135369536.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	32843	33769	.	-	.	ID=gene-C9E97_RS05410;Name=C9E97_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05410;old_locus_tag=C9E97_05545
NZ_PYKA01000042.1	Protein Homology	CDS	32843	33769	.	-	0	ID=cds-WP_135369535.1;Parent=gene-C9E97_RS05410;Dbxref=GenBank:WP_135369535.1;Name=WP_135369535.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004961030.1;locus_tag=C9E97_RS05410;product=LysR family transcriptional regulator;protein_id=WP_135369535.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	34210	34332	.	+	.	ID=gene-C9E97_RS24035;Name=C9E97_RS24035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS24035
NZ_PYKA01000042.1	Protein Homology	CDS	34210	34332	.	+	0	ID=cds-WP_431194533.1;Parent=gene-C9E97_RS24035;Dbxref=GenBank:WP_431194533.1;Name=WP_431194533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000415762.1;locus_tag=C9E97_RS24035;product=DUF29 family protein;protein_id=WP_431194533.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	34777	35064	.	-	.	ID=gene-C9E97_RS05425;Name=C9E97_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05425;old_locus_tag=C9E97_05560
NZ_PYKA01000042.1	Protein Homology	CDS	34777	35064	.	-	0	ID=cds-WP_135369534.1;Parent=gene-C9E97_RS05425;Dbxref=GenBank:WP_135369534.1;Name=WP_135369534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253166.1;locus_tag=C9E97_RS05425;product=DUF1493 family protein;protein_id=WP_135369534.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	pseudogene	35188	35385	.	+	.	ID=gene-C9E97_RS05430;Name=C9E97_RS05430;end_range=35385,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS05430;old_locus_tag=C9E97_05565;partial=true;pseudo=true;start_range=.,35188
NZ_PYKA01000042.1	Protein Homology	CDS	35188	35385	.	+	0	ID=cds-C9E97_RS05430;Parent=gene-C9E97_RS05430;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=35385,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001567368.1;locus_tag=C9E97_RS05430;partial=true;product=ISNCY family transposase;pseudo=true;start_range=.,35188;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	35548	36603	.	-	.	ID=gene-C9E97_RS05435;Name=C9E97_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05435;old_locus_tag=C9E97_05570
NZ_PYKA01000042.1	Protein Homology	CDS	35548	36603	.	-	0	ID=cds-WP_064043641.1;Parent=gene-C9E97_RS05435;Dbxref=GenBank:WP_064043641.1;Name=WP_064043641.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028222.6;locus_tag=C9E97_RS05435;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_064043641.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	36700	37482	.	-	.	ID=gene-C9E97_RS05440;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=C9E97_RS05440;old_locus_tag=C9E97_05575
NZ_PYKA01000042.1	Protein Homology	CDS	36700	37482	.	-	0	ID=cds-WP_135369533.1;Parent=gene-C9E97_RS05440;Dbxref=GenBank:WP_135369533.1;Name=WP_135369533.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: protein motif:HMM:NF001490.0;locus_tag=C9E97_RS05440;product=5'/3'-nucleotidase SurE;protein_id=WP_135369533.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	37552	37824	.	-	.	ID=gene-C9E97_RS05445;Name=C9E97_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05445;old_locus_tag=C9E97_05580
NZ_PYKA01000042.1	Protein Homology	CDS	37552	37824	.	-	0	ID=cds-WP_023218031.1;Parent=gene-C9E97_RS05445;Dbxref=GenBank:WP_023218031.1;Name=WP_023218031.1;Ontology_term=GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101670.1;locus_tag=C9E97_RS05445;product=HPr family phosphocarrier protein;protein_id=WP_023218031.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	37866	38705	.	-	.	ID=gene-C9E97_RS05450;Name=C9E97_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05450;old_locus_tag=C9E97_05585
NZ_PYKA01000042.1	Protein Homology	CDS	37866	38705	.	-	0	ID=cds-WP_023218030.1;Parent=gene-C9E97_RS05450;Dbxref=GenBank:WP_023218030.1;Name=WP_023218030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462679.1;locus_tag=C9E97_RS05450;product=class II aldolase;protein_id=WP_023218030.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	38711	39454	.	-	.	ID=gene-C9E97_RS05455;Name=C9E97_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05455;old_locus_tag=C9E97_05590
NZ_PYKA01000042.1	Protein Homology	CDS	38711	39454	.	-	0	ID=cds-WP_023218029.1;Parent=gene-C9E97_RS05455;Dbxref=GenBank:WP_023218029.1;Name=WP_023218029.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020232695.1;locus_tag=C9E97_RS05455;product=GntR family transcriptional regulator;protein_id=WP_023218029.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	39641	40675	.	-	.	ID=gene-C9E97_RS05460;Name=C9E97_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05460;old_locus_tag=C9E97_05595
NZ_PYKA01000042.1	Protein Homology	CDS	39641	40675	.	-	0	ID=cds-WP_023218028.1;Parent=gene-C9E97_RS05460;Dbxref=GenBank:WP_023218028.1;Name=WP_023218028.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028222.6;locus_tag=C9E97_RS05460;product=zinc-dependent dehydrogenase;protein_id=WP_023218028.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	40675	42186	.	-	.	ID=gene-C9E97_RS05465;Name=C9E97_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05465;old_locus_tag=C9E97_05600
NZ_PYKA01000042.1	Protein Homology	CDS	40675	42186	.	-	0	ID=cds-WP_023231843.1;Parent=gene-C9E97_RS05465;Dbxref=GenBank:WP_023231843.1;Name=WP_023231843.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:NF012589.6;locus_tag=C9E97_RS05465;product=FGGY-family carbohydrate kinase;protein_id=WP_023231843.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	42264	43658	.	-	.	ID=gene-C9E97_RS05470;Name=C9E97_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05470;old_locus_tag=C9E97_05605
NZ_PYKA01000042.1	Protein Homology	CDS	42264	43658	.	-	0	ID=cds-WP_024147325.1;Parent=gene-C9E97_RS05470;Dbxref=GenBank:WP_024147325.1;Name=WP_024147325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001304938.1;locus_tag=C9E97_RS05470;product=PTS galactitol transporter subunit IIC;protein_id=WP_024147325.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	43667	43948	.	-	.	ID=gene-C9E97_RS05475;Name=C9E97_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05475;old_locus_tag=C9E97_05610
NZ_PYKA01000042.1	Protein Homology	CDS	43667	43948	.	-	0	ID=cds-WP_135369532.1;Parent=gene-C9E97_RS05475;Dbxref=GenBank:WP_135369532.1;Name=WP_135369532.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: protein motif:HMM:NF014368.6;locus_tag=C9E97_RS05475;product=PTS sugar transporter subunit IIB;protein_id=WP_135369532.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	44008	44472	.	-	.	ID=gene-C9E97_RS05480;Name=C9E97_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05480;old_locus_tag=C9E97_05615
NZ_PYKA01000042.1	Protein Homology	CDS	44008	44472	.	-	0	ID=cds-WP_072275481.1;Parent=gene-C9E97_RS05480;Dbxref=GenBank:WP_072275481.1;Name=WP_072275481.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:NF012579.6;locus_tag=C9E97_RS05480;product=PTS sugar transporter subunit IIA;protein_id=WP_072275481.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	45104	45352	.	+	.	ID=gene-C9E97_RS05485;Name=C9E97_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05485;old_locus_tag=C9E97_05620
NZ_PYKA01000042.1	Protein Homology	CDS	45104	45352	.	+	0	ID=cds-WP_000885424.1;Parent=gene-C9E97_RS05485;Dbxref=GenBank:WP_000885424.1;Name=WP_000885424.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460511.1;locus_tag=C9E97_RS05485;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_000885424.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	45342	45626	.	+	.	ID=gene-C9E97_RS05490;Name=C9E97_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05490;old_locus_tag=C9E97_05625
NZ_PYKA01000042.1	Protein Homology	CDS	45342	45626	.	+	0	ID=cds-WP_000221343.1;Parent=gene-C9E97_RS05490;Dbxref=GenBank:WP_000221343.1;Name=WP_000221343.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460510.1;locus_tag=C9E97_RS05490;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_000221343.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	45797	46186	.	+	.	ID=gene-C9E97_RS05495;Name=C9E97_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05495;old_locus_tag=C9E97_05630
NZ_PYKA01000042.1	Protein Homology	CDS	45797	46186	.	+	0	ID=cds-WP_001652798.1;Parent=gene-C9E97_RS05495;Dbxref=GenBank:WP_001652798.1;Name=WP_001652798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460509.1;locus_tag=C9E97_RS05495;product=RidA family protein;protein_id=WP_001652798.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	46234	47313	.	-	.	ID=gene-C9E97_RS05500;Name=C9E97_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05500;old_locus_tag=C9E97_05635
NZ_PYKA01000042.1	Protein Homology	CDS	46234	47313	.	-	0	ID=cds-WP_079973832.1;Parent=gene-C9E97_RS05500;Dbxref=GenBank:WP_079973832.1;Name=WP_079973832.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000954687.1;locus_tag=C9E97_RS05500;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_079973832.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	47506	47994	.	-	.	ID=gene-C9E97_RS05505;Name=C9E97_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05505;old_locus_tag=C9E97_05640
NZ_PYKA01000042.1	Protein Homology	CDS	47506	47994	.	-	0	ID=cds-WP_001293637.1;Parent=gene-C9E97_RS05505;Dbxref=GenBank:WP_001293637.1;Name=WP_001293637.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460507.1;locus_tag=C9E97_RS05505;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_001293637.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	48039	49547	.	+	.	ID=gene-C9E97_RS05510;Name=C9E97_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05510;old_locus_tag=C9E97_05645
NZ_PYKA01000042.1	Protein Homology	CDS	48039	49547	.	+	0	ID=cds-WP_135369105.1;Parent=gene-C9E97_RS05510;Dbxref=GenBank:WP_135369105.1;Name=WP_135369105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460506.1;locus_tag=C9E97_RS05510;product=FAD-dependent oxidoreductase;protein_id=WP_135369105.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	49537	50778	.	+	.	ID=gene-C9E97_RS05515;Name=C9E97_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05515;old_locus_tag=C9E97_05650
NZ_PYKA01000042.1	Protein Homology	CDS	49537	50778	.	+	0	ID=cds-WP_135369106.1;Parent=gene-C9E97_RS05515;Dbxref=GenBank:WP_135369106.1;Name=WP_135369106.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460505.1;locus_tag=C9E97_RS05515;product=MFS transporter;protein_id=WP_135369106.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	50848	52404	.	+	.	ID=gene-C9E97_RS05520;Name=C9E97_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05520;old_locus_tag=C9E97_05655
NZ_PYKA01000042.1	Protein Homology	CDS	50848	52404	.	+	0	ID=cds-WP_135369107.1;Parent=gene-C9E97_RS05520;Dbxref=GenBank:WP_135369107.1;Name=WP_135369107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460504.1;locus_tag=C9E97_RS05520;product=PhoPQ-activated pathogenicity-related family protein;protein_id=WP_135369107.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	52581	53867	.	+	.	ID=gene-C9E97_RS05525;Name=C9E97_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05525;old_locus_tag=C9E97_05660
NZ_PYKA01000042.1	Protein Homology	CDS	52581	53867	.	+	0	ID=cds-WP_000824240.1;Parent=gene-C9E97_RS05525;Dbxref=GenBank:WP_000824240.1;Name=WP_000824240.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460503.1;locus_tag=C9E97_RS05525;product=MFS transporter;protein_id=WP_000824240.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	53842	54867	.	+	.	ID=gene-C9E97_RS05530;Name=C9E97_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05530;old_locus_tag=C9E97_05665
NZ_PYKA01000042.1	Protein Homology	CDS	53842	54867	.	+	0	ID=cds-WP_000864928.1;Parent=gene-C9E97_RS05530;Dbxref=GenBank:WP_000864928.1;Name=WP_000864928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460502.1;locus_tag=C9E97_RS05530;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_000864928.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	54926	55717	.	-	.	ID=gene-C9E97_RS05535;Name=C9E97_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05535;old_locus_tag=C9E97_05670
NZ_PYKA01000042.1	Protein Homology	CDS	54926	55717	.	-	0	ID=cds-WP_001518759.1;Parent=gene-C9E97_RS05535;Dbxref=GenBank:WP_001518759.1;Name=WP_001518759.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460501.1;locus_tag=C9E97_RS05535;product=FadR/GntR family transcriptional regulator;protein_id=WP_001518759.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	55763	56854	.	-	.	ID=gene-C9E97_RS05540;Name=C9E97_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05540;old_locus_tag=C9E97_05675
NZ_PYKA01000042.1	Protein Homology	CDS	55763	56854	.	-	0	ID=cds-WP_000981375.1;Parent=gene-C9E97_RS05540;Dbxref=GenBank:WP_000981375.1;Name=WP_000981375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460500.1;locus_tag=C9E97_RS05540;product=choloylglycine hydrolase family protein;protein_id=WP_000981375.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	57283	58386	.	+	.	ID=gene-C9E97_RS05545;Name=C9E97_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05545;old_locus_tag=C9E97_05680
NZ_PYKA01000042.1	Protein Homology	CDS	57283	58386	.	+	0	ID=cds-WP_001194448.1;Parent=gene-C9E97_RS05545;Dbxref=GenBank:WP_001194448.1;Name=WP_001194448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460499.1;locus_tag=C9E97_RS05545;product=hydrogenase small subunit;protein_id=WP_001194448.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	58389	60191	.	+	.	ID=gene-C9E97_RS05550;Name=C9E97_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05550;old_locus_tag=C9E97_05685
NZ_PYKA01000042.1	Protein Homology	CDS	58389	60191	.	+	0	ID=cds-WP_000331200.1;Parent=gene-C9E97_RS05550;Dbxref=GenBank:WP_000331200.1;Name=WP_000331200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=C9E97_RS05550;product=nickel-dependent hydrogenase large subunit;protein_id=WP_000331200.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	60142	60885	.	+	.	ID=gene-C9E97_RS05555;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=C9E97_RS05555;old_locus_tag=C9E97_05690
NZ_PYKA01000042.1	Protein Homology	CDS	60142	60885	.	+	0	ID=cds-WP_000924456.1;Parent=gene-C9E97_RS05555;Dbxref=GenBank:WP_000924456.1;Name=WP_000924456.1;Ontology_term=GO:0022904,GO:0005506,GO:0009055,GO:0016020;gbkey=CDS;gene=cybH;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460497.1;locus_tag=C9E97_RS05555;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=WP_000924456.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	60891	61499	.	+	.	ID=gene-C9E97_RS05560;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=C9E97_RS05560;old_locus_tag=C9E97_05695
NZ_PYKA01000042.1	Protein Homology	CDS	60891	61499	.	+	0	ID=cds-WP_000852664.1;Parent=gene-C9E97_RS05560;Dbxref=GenBank:WP_000852664.1;Name=WP_000852664.1;Ontology_term=GO:0051604,GO:0004190,GO:0046872,GO:0009375;gbkey=CDS;gene=hybD;go_component=ferredoxin hydrogenase complex|0009375||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA,metal ion binding|0046872||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460496.1;locus_tag=C9E97_RS05560;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_000852664.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	61499	61798	.	+	.	ID=gene-C9E97_RS05565;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=C9E97_RS05565;old_locus_tag=C9E97_05700
NZ_PYKA01000042.1	Protein Homology	CDS	61499	61798	.	+	0	ID=cds-WP_000334902.1;Parent=gene-C9E97_RS05565;Dbxref=GenBank:WP_000334902.1;Name=WP_000334902.1;Ontology_term=GO:0065003,GO:0016530,GO:0051082;gbkey=CDS;gene=hypC;go_function=metallochaperone activity|0016530||IEA,unfolded protein binding|0051082||IEA;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460495.1;locus_tag=C9E97_RS05565;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WP_000334902.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	61795	62205	.	+	.	ID=gene-C9E97_RS05570;Name=C9E97_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05570;old_locus_tag=C9E97_05705
NZ_PYKA01000042.1	Protein Homology	CDS	61795	62205	.	+	0	ID=cds-WP_000155986.1;Parent=gene-C9E97_RS05570;Dbxref=GenBank:WP_000155986.1;Name=WP_000155986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460494.1;locus_tag=C9E97_RS05570;product=hydrogenase;protein_id=WP_000155986.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	62223	63284	.	+	.	ID=gene-C9E97_RS05575;Name=C9E97_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05575;old_locus_tag=C9E97_05710
NZ_PYKA01000042.1	Protein Homology	CDS	62223	63284	.	+	0	ID=cds-WP_001016756.1;Parent=gene-C9E97_RS05575;Dbxref=GenBank:WP_001016756.1;Name=WP_001016756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460493.1;locus_tag=C9E97_RS05575;product=hydrogenase expression/formation C-terminal domain-containing protein;protein_id=WP_001016756.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	63272	64159	.	+	.	ID=gene-C9E97_RS05580;Name=C9E97_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05580;old_locus_tag=C9E97_05715
NZ_PYKA01000042.1	Protein Homology	CDS	63272	64159	.	+	0	ID=cds-WP_080081369.1;Parent=gene-C9E97_RS05580;Dbxref=GenBank:WP_080081369.1;Name=WP_080081369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460492.1;locus_tag=C9E97_RS05580;product=ATP/GTP-binding protein;protein_id=WP_080081369.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	64172	64513	.	+	.	ID=gene-C9E97_RS05585;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=C9E97_RS05585;old_locus_tag=C9E97_05720
NZ_PYKA01000042.1	Protein Homology	CDS	64172	64513	.	+	0	ID=cds-WP_000544772.1;Parent=gene-C9E97_RS05585;Dbxref=GenBank:WP_000544772.1;Name=WP_000544772.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460491.1;locus_tag=C9E97_RS05585;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544772.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	64654	65772	.	-	.	ID=gene-C9E97_RS05590;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=C9E97_RS05590;old_locus_tag=C9E97_05725
NZ_PYKA01000042.1	Protein Homology	CDS	64654	65772	.	-	0	ID=cds-WP_000758336.1;Parent=gene-C9E97_RS05590;Dbxref=GenBank:WP_000758336.1;Name=WP_000758336.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460490.1;locus_tag=C9E97_RS05590;product=porin OmpC;protein_id=WP_000758336.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	66489	67031	.	+	.	ID=gene-C9E97_RS05595;Name=C9E97_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05595;old_locus_tag=C9E97_05730
NZ_PYKA01000042.1	Protein Homology	CDS	66489	67031	.	+	0	ID=cds-WP_050067591.1;Parent=gene-C9E97_RS05595;Dbxref=GenBank:WP_050067591.1;Name=WP_050067591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460488.1;locus_tag=C9E97_RS05595;product=YybH family protein;protein_id=WP_050067591.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	67087	68001	.	-	.	ID=gene-C9E97_RS05600;Name=C9E97_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05600;old_locus_tag=C9E97_05735
NZ_PYKA01000042.1	Protein Homology	CDS	67087	68001	.	-	0	ID=cds-WP_023204287.1;Parent=gene-C9E97_RS05600;Dbxref=GenBank:WP_023204287.1;Name=WP_023204287.1;Ontology_term=GO:0005254;gbkey=CDS;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=C9E97_RS05600;product=bestrophin family protein;protein_id=WP_023204287.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	68258	68617	.	-	.	ID=gene-C9E97_RS05605;Name=C9E97_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05605;old_locus_tag=C9E97_05740
NZ_PYKA01000042.1	Protein Homology	CDS	68258	68617	.	-	0	ID=cds-WP_000992451.1;Parent=gene-C9E97_RS05605;Dbxref=GenBank:WP_000992451.1;Name=WP_000992451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460486.1;locus_tag=C9E97_RS05605;product=DUF4186 domain-containing protein;protein_id=WP_000992451.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	68617	69543	.	-	.	ID=gene-C9E97_RS05610;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=C9E97_RS05610;old_locus_tag=C9E97_05745
NZ_PYKA01000042.1	Protein Homology	CDS	68617	69543	.	-	0	ID=cds-WP_000090081.1;Parent=gene-C9E97_RS05610;Dbxref=GenBank:WP_000090081.1;Name=WP_000090081.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=C9E97_RS05610;product=glutaminase B;protein_id=WP_000090081.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	69616	71004	.	-	.	ID=gene-C9E97_RS05615;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=C9E97_RS05615;old_locus_tag=C9E97_05750
NZ_PYKA01000042.1	Protein Homology	CDS	69616	71004	.	-	0	ID=cds-WP_000178413.1;Parent=gene-C9E97_RS05615;Dbxref=GenBank:WP_000178413.1;Name=WP_000178413.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460484.1;locus_tag=C9E97_RS05615;product=succinate-semialdehyde dehydrogenase;protein_id=WP_000178413.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	71107	71979	.	+	.	ID=gene-C9E97_RS05620;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=C9E97_RS05620;old_locus_tag=C9E97_05755
NZ_PYKA01000042.1	Protein Homology	CDS	71107	71979	.	+	0	ID=cds-WP_135369109.1;Parent=gene-C9E97_RS05620;Dbxref=GenBank:WP_135369109.1;Name=WP_135369109.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460483.1;locus_tag=C9E97_RS05620;product=putrescine utilization regulator PtrR;protein_id=WP_135369109.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	72095	73285	.	+	.	ID=gene-C9E97_RS05625;Name=C9E97_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05625;old_locus_tag=C9E97_05760
NZ_PYKA01000042.1	Protein Homology	CDS	72095	73285	.	+	0	ID=cds-WP_000154617.1;Parent=gene-C9E97_RS05625;Dbxref=GenBank:WP_000154617.1;Name=WP_000154617.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460482.1;locus_tag=C9E97_RS05625;product=sugar transporter;protein_id=WP_000154617.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	73332	73997	.	-	.	ID=gene-C9E97_RS05630;Name=C9E97_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05630;old_locus_tag=C9E97_05765
NZ_PYKA01000042.1	Protein Homology	CDS	73332	73997	.	-	0	ID=cds-WP_000968968.1;Parent=gene-C9E97_RS05630;Dbxref=GenBank:WP_000968968.1;Name=WP_000968968.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460481.1;locus_tag=C9E97_RS05630;product=MarC family NAAT transporter;protein_id=WP_000968968.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	74256	74690	.	+	.	ID=gene-C9E97_RS05635;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=C9E97_RS05635;old_locus_tag=C9E97_05770
NZ_PYKA01000042.1	Protein Homology	CDS	74256	74690	.	+	0	ID=cds-WP_000843434.1;Parent=gene-C9E97_RS05635;Dbxref=GenBank:WP_000843434.1;Name=WP_000843434.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460480.1;locus_tag=C9E97_RS05635;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_000843434.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	74710	75093	.	+	.	ID=gene-C9E97_RS05640;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=C9E97_RS05640;old_locus_tag=C9E97_05775
NZ_PYKA01000042.1	Protein Homology	CDS	74710	75093	.	+	0	ID=cds-WP_000091194.1;Parent=gene-C9E97_RS05640;Dbxref=GenBank:WP_000091194.1;Name=WP_000091194.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091194.1;locus_tag=C9E97_RS05640;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_000091194.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	75122	75337	.	+	.	ID=gene-C9E97_RS05645;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=C9E97_RS05645;old_locus_tag=C9E97_05780
NZ_PYKA01000042.1	Protein Homology	CDS	75122	75337	.	+	0	ID=cds-WP_000783049.1;Parent=gene-C9E97_RS05645;Dbxref=GenBank:WP_000783049.1;Name=WP_000783049.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460478.1;locus_tag=C9E97_RS05645;product=multiple antibiotic resistance protein MarB;protein_id=WP_000783049.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	75456	76358	.	-	.	ID=gene-C9E97_RS05650;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=C9E97_RS05650;old_locus_tag=C9E97_05785
NZ_PYKA01000042.1	Protein Homology	CDS	75456	76358	.	-	0	ID=cds-WP_135369110.1;Parent=gene-C9E97_RS05650;Dbxref=GenBank:WP_135369110.1;Name=WP_135369110.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460477.1;locus_tag=C9E97_RS05650;product=O-acetylserine/cysteine exporter;protein_id=WP_135369110.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	76586	77773	.	+	.	ID=gene-C9E97_RS05655;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=C9E97_RS05655;old_locus_tag=C9E97_05790
NZ_PYKA01000042.1	Protein Homology	CDS	76586	77773	.	+	0	ID=cds-WP_001068056.1;Parent=gene-C9E97_RS05655;Dbxref=GenBank:WP_001068056.1;Name=WP_001068056.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460476.1;locus_tag=C9E97_RS05655;product=efflux MFS transporter YdeE;protein_id=WP_001068056.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	78021	78116	.	+	.	ID=gene-C9E97_RS05660;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=C9E97_RS05660;old_locus_tag=C9E97_05795
NZ_PYKA01000042.1	Protein Homology	CDS	78021	78116	.	+	0	ID=cds-WP_000901531.1;Parent=gene-C9E97_RS05660;Dbxref=GenBank:WP_000901531.1;Name=WP_000901531.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=C9E97_RS05660;product=protein MgtS;protein_id=WP_000901531.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	78464	78856	.	-	.	ID=gene-C9E97_RS05665;Name=C9E97_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05665;old_locus_tag=C9E97_05800
NZ_PYKA01000042.1	Protein Homology	CDS	78464	78856	.	-	0	ID=cds-WP_000776351.1;Parent=gene-C9E97_RS05665;Dbxref=GenBank:WP_000776351.1;Name=WP_000776351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460475.1;locus_tag=C9E97_RS05665;product=YdeI family stress tolerance OB fold protein;protein_id=WP_000776351.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	79282	79809	.	+	.	ID=gene-C9E97_RS05670;Name=C9E97_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05670;old_locus_tag=C9E97_05805
NZ_PYKA01000042.1	Protein Homology	CDS	79282	79809	.	+	0	ID=cds-WP_001235357.1;Parent=gene-C9E97_RS05670;Dbxref=GenBank:WP_001235357.1;Name=WP_001235357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460474.1;locus_tag=C9E97_RS05670;product=2-oxo-tetronate isomerase;protein_id=WP_001235357.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	79929	80111	.	-	.	ID=gene-C9E97_RS05675;Name=C9E97_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05675;old_locus_tag=C9E97_05810
NZ_PYKA01000042.1	Protein Homology	CDS	79929	80111	.	-	0	ID=cds-WP_000807642.1;Parent=gene-C9E97_RS05675;Dbxref=GenBank:WP_000807642.1;Name=WP_000807642.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460473.1;locus_tag=C9E97_RS05675;product=general stress protein;protein_id=WP_000807642.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	80456	82498	.	-	.	ID=gene-C9E97_RS05685;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=C9E97_RS05685;old_locus_tag=C9E97_05820
NZ_PYKA01000042.1	Protein Homology	CDS	80456	82498	.	-	0	ID=cds-WP_000106261.1;Parent=gene-C9E97_RS05685;Dbxref=GenBank:WP_000106261.1;Name=WP_000106261.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460472.1;locus_tag=C9E97_RS05685;product=peptidyl-dipeptidase Dcp;protein_id=WP_000106261.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	82637	83383	.	+	.	ID=gene-C9E97_RS05690;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=C9E97_RS05690;old_locus_tag=C9E97_05825
NZ_PYKA01000042.1	Protein Homology	CDS	82637	83383	.	+	0	ID=cds-WP_135369111.1;Parent=gene-C9E97_RS05690;Dbxref=GenBank:WP_135369111.1;Name=WP_135369111.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460471.1;locus_tag=C9E97_RS05690;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_135369111.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	83513	84199	.	+	.	ID=gene-C9E97_RS05695;Name=C9E97_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05695;old_locus_tag=C9E97_05830
NZ_PYKA01000042.1	Protein Homology	CDS	83513	84199	.	+	0	ID=cds-WP_000215563.1;Parent=gene-C9E97_RS05695;Dbxref=GenBank:WP_000215563.1;Name=WP_000215563.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460470.1;locus_tag=C9E97_RS05695;product=GntR family transcriptional regulator;protein_id=WP_000215563.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	84380	84583	.	+	.	ID=gene-C9E97_RS05700;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=C9E97_RS05700;old_locus_tag=C9E97_05835
NZ_PYKA01000042.1	Protein Homology	CDS	84380	84583	.	+	0	ID=cds-WP_000989267.1;Parent=gene-C9E97_RS05700;Dbxref=GenBank:WP_000989267.1;Name=WP_000989267.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460469.1;locus_tag=C9E97_RS05700;product=putative selenium delivery protein YdfZ;protein_id=WP_000989267.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	84650	86116	.	-	.	ID=gene-C9E97_RS05705;Name=C9E97_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05705;old_locus_tag=C9E97_05840
NZ_PYKA01000042.1	Protein Homology	CDS	84650	86116	.	-	0	ID=cds-WP_017465703.1;Parent=gene-C9E97_RS05705;Dbxref=GenBank:WP_017465703.1;Name=WP_017465703.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460468.1;locus_tag=C9E97_RS05705;product=mannitol dehydrogenase family protein;protein_id=WP_017465703.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	86260	87639	.	-	.	ID=gene-C9E97_RS05710;Name=C9E97_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05710;old_locus_tag=C9E97_05845
NZ_PYKA01000042.1	Protein Homology	CDS	86260	87639	.	-	0	ID=cds-WP_023224957.1;Parent=gene-C9E97_RS05710;Dbxref=GenBank:WP_023224957.1;Name=WP_023224957.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210164.1;locus_tag=C9E97_RS05710;product=MFS transporter;protein_id=WP_023224957.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	87693	88712	.	-	.	ID=gene-C9E97_RS05715;Name=C9E97_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05715;old_locus_tag=C9E97_05850
NZ_PYKA01000042.1	Protein Homology	CDS	87693	88712	.	-	0	ID=cds-WP_135369112.1;Parent=gene-C9E97_RS05715;Dbxref=GenBank:WP_135369112.1;Name=WP_135369112.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460466.1;locus_tag=C9E97_RS05715;product=Zn-dependent oxidoreductase;protein_id=WP_135369112.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	88723	89937	.	-	.	ID=gene-C9E97_RS05720;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=C9E97_RS05720;old_locus_tag=C9E97_05855
NZ_PYKA01000042.1	Protein Homology	CDS	88723	89937	.	-	0	ID=cds-WP_135369113.1;Parent=gene-C9E97_RS05720;Dbxref=GenBank:WP_135369113.1;Name=WP_135369113.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=C9E97_RS05720;product=starvation-sensing protein RspA;protein_id=WP_135369113.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	90059	90385	.	-	.	ID=gene-C9E97_RS05725;Name=C9E97_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05725;old_locus_tag=C9E97_05860
NZ_PYKA01000042.1	Protein Homology	CDS	90059	90385	.	-	0	ID=cds-WP_000921389.1;Parent=gene-C9E97_RS05725;Dbxref=GenBank:WP_000921389.1;Name=WP_000921389.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460464.1;locus_tag=C9E97_RS05725;product=YnfA family protein;protein_id=WP_000921389.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	90537	90878	.	+	.	ID=gene-C9E97_RS05730;Name=C9E97_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05730;old_locus_tag=C9E97_05865
NZ_PYKA01000042.1	Protein Homology	CDS	90537	90878	.	+	0	ID=cds-WP_001066440.1;Parent=gene-C9E97_RS05730;Dbxref=GenBank:WP_001066440.1;Name=WP_001066440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460463.1;locus_tag=C9E97_RS05730;product=DUF1283 family protein;protein_id=WP_001066440.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	90914	91474	.	+	.	ID=gene-C9E97_RS05735;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=C9E97_RS05735;old_locus_tag=C9E97_05870
NZ_PYKA01000042.1	Protein Homology	CDS	90914	91474	.	+	0	ID=cds-WP_000199997.1;Parent=gene-C9E97_RS05735;Dbxref=GenBank:WP_000199997.1;Name=WP_000199997.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460462.1;locus_tag=C9E97_RS05735;product=spermidine N1-acetyltransferase;protein_id=WP_000199997.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	pseudogene	91515	92224	.	-	.	ID=gene-C9E97_RS05740;Name=C9E97_RS05740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS05740;old_locus_tag=C9E97_05875;pseudo=true
NZ_PYKA01000042.1	Protein Homology	CDS	91515	92224	.	-	0	ID=cds-C9E97_RS05740;Parent=gene-C9E97_RS05740;Note=frameshifted;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465701.1;locus_tag=C9E97_RS05740;product=YnfC family lipoprotein;pseudo=true;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	92328	92636	.	+	.	ID=gene-C9E97_RS05745;Name=C9E97_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05745;old_locus_tag=C9E97_05880
NZ_PYKA01000042.1	Protein Homology	CDS	92328	92636	.	+	0	ID=cds-WP_000975516.1;Parent=gene-C9E97_RS05745;Dbxref=GenBank:WP_000975516.1;Name=WP_000975516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460460.1;locus_tag=C9E97_RS05745;product=DUF1161 domain-containing protein;protein_id=WP_000975516.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	92793	95231	.	+	.	ID=gene-C9E97_RS05750;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=protein_coding;locus_tag=C9E97_RS05750;old_locus_tag=C9E97_05885
NZ_PYKA01000042.1	Protein Homology	CDS	92793	95231	.	+	0	ID=cds-WP_023227484.1;Parent=gene-C9E97_RS05750;Dbxref=GenBank:WP_023227484.1;Name=WP_023227484.1;gbkey=CDS;gene=ynfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006788576.1;locus_tag=C9E97_RS05750;product=selenate/tellurate reductase subunit YnfE;protein_id=WP_023227484.1;transl_table=11
NZ_PYKA01000042.1	RefSeq	gene	95330	97765	.	+	.	ID=gene-C9E97_RS05755;Name=ynfF;gbkey=Gene;gene=ynfF;gene_biotype=protein_coding;locus_tag=C9E97_RS05755;old_locus_tag=C9E97_05890
NZ_PYKA01000042.1	Protein Homology	CDS	95330	97765	.	+	0	ID=cds-WP_000705276.1;Parent=gene-C9E97_RS05755;Dbxref=GenBank:WP_000705276.1;Name=WP_000705276.1;gbkey=CDS;gene=ynfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460458.1;locus_tag=C9E97_RS05755;product=selenate/tellurate reductase subunit YnfF;protein_id=WP_000705276.1;transl_table=11
##sequence-region NZ_PYKA01000033.1 1 385
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000033.1	RefSeq	region	1	385	.	+	.	ID=NZ_PYKA01000033.1:1..385;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000033.1	RefSeq	gene	1	385	.	+	.	ID=gene-C9E97_RS03885;Name=C9E97_RS03885;end_range=385,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03885;old_locus_tag=C9E97_04000;partial=true;start_range=.,1
NZ_PYKA01000033.1	Protein Homology	CDS	1	385	.	+	2	ID=cds-WP_135495701.1;Parent=gene-C9E97_RS03885;Dbxref=GenBank:WP_135495701.1;Name=WP_135495701.1;end_range=385,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9E97_RS03885;partial=true;product=biotin/lipoyl-containing protein;protein_id=WP_135495701.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKA01000006.1 1 379
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000006.1	RefSeq	region	1	379	.	+	.	ID=NZ_PYKA01000006.1:1..379;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000006.1	RefSeq	gene	1	379	.	-	.	ID=gene-C9E97_RS00300;Name=C9E97_RS00300;end_range=379,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00300;old_locus_tag=C9E97_00310;partial=true;start_range=.,1
NZ_PYKA01000006.1	Protein Homology	CDS	1	379	.	-	2	ID=cds-WP_348631008.1;Parent=gene-C9E97_RS00300;Dbxref=GenBank:WP_348631008.1;Name=WP_348631008.1;end_range=379,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9E97_RS00300;partial=true;product=biotin/lipoyl-containing protein;protein_id=WP_348631008.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKA01000125.1 1 378
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000125.1	RefSeq	region	1	378	.	+	.	ID=NZ_PYKA01000125.1:1..378;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000125.1	RefSeq	gene	1	378	.	-	.	ID=gene-C9E97_RS20390;Name=C9E97_RS20390;end_range=378,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20390;old_locus_tag=C9E97_20860;partial=true;start_range=.,1
NZ_PYKA01000125.1	Protein Homology	CDS	1	378	.	-	0	ID=cds-WP_210115375.1;Parent=gene-C9E97_RS20390;Dbxref=GenBank:WP_210115375.1;Name=WP_210115375.1;end_range=378,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747458.1;locus_tag=C9E97_RS20390;partial=true;product=autotransporter-associated beta strand repeat-containing protein;protein_id=WP_210115375.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKA01000090.1 1 345
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000090.1	RefSeq	region	1	345	.	+	.	ID=NZ_PYKA01000090.1:1..345;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000090.1	RefSeq	gene	1	290	.	-	.	ID=gene-C9E97_RS12155;Name=C9E97_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12155;old_locus_tag=C9E97_12440;partial=true;start_range=.,1
NZ_PYKA01000090.1	Protein Homology	CDS	1	290	.	-	0	ID=cds-WP_135495725.1;Parent=gene-C9E97_RS12155;Dbxref=GenBank:WP_135495725.1;Name=WP_135495725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001170054.1;locus_tag=C9E97_RS12155;partial=true;product=hypothetical protein;protein_id=WP_135495725.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKA01000082.1 1 293
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000082.1	RefSeq	region	1	293	.	+	.	ID=NZ_PYKA01000082.1:1..293;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000082.1	RefSeq	gene	92	167	.	+	.	ID=gene-C9E97_RS11475;Name=C9E97_RS11475;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS11475;old_locus_tag=C9E97_11740
NZ_PYKA01000082.1	tRNAscan-SE	tRNA	92	167	.	+	.	ID=rna-C9E97_RS11475;Parent=gene-C9E97_RS11475;anticodon=(pos:126..128);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS11475;product=tRNA-Glu
NZ_PYKA01000082.1	tRNAscan-SE	exon	92	167	.	+	.	ID=exon-C9E97_RS11475-1;Parent=rna-C9E97_RS11475;anticodon=(pos:126..128);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS11475;product=tRNA-Glu
##sequence-region NZ_PYKA01000085.1 1 260
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000085.1	RefSeq	region	1	260	.	+	.	ID=NZ_PYKA01000085.1:1..260;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000085.1	RefSeq	gene	1	260	.	+	.	ID=gene-C9E97_RS11830;Name=C9E97_RS11830;end_range=260,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11830;old_locus_tag=C9E97_12100;partial=true;start_range=.,1
NZ_PYKA01000085.1	Protein Homology	CDS	1	260	.	+	0	ID=cds-WP_024156505.1;Parent=gene-C9E97_RS11830;Dbxref=GenBank:WP_024156505.1;Name=WP_024156505.1;Ontology_term=GO:0015074;end_range=260,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011369065.1;locus_tag=C9E97_RS11830;partial=true;product=integrase core domain-containing protein;protein_id=WP_024156505.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKA01000025.1 1 253
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000025.1	RefSeq	region	1	253	.	+	.	ID=NZ_PYKA01000025.1:1..253;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000025.1	RefSeq	pseudogene	1	253	.	+	.	ID=gene-C9E97_RS03265;Name=C9E97_RS03265;end_range=253,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS03265;old_locus_tag=C9E97_03360;partial=true;pseudo=true;start_range=.,1
NZ_PYKA01000025.1	Protein Homology	CDS	1	253	.	+	0	ID=cds-C9E97_RS03265;Parent=gene-C9E97_RS03265;Note=catalyzes the formation of pyruvate from oxaloacetate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=253,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9E97_RS03265;partial=true;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PYKA01000080.1 1 253
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000080.1	RefSeq	region	1	253	.	+	.	ID=NZ_PYKA01000080.1:1..253;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000080.1	RefSeq	gene	1	253	.	-	.	ID=gene-C9E97_RS11370;Name=C9E97_RS11370;end_range=253,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11370;old_locus_tag=C9E97_11635;partial=true;start_range=.,1
NZ_PYKA01000080.1	Protein Homology	CDS	1	253	.	-	0	ID=cds-WP_135495722.1;Parent=gene-C9E97_RS11370;Dbxref=GenBank:WP_135495722.1;Name=WP_135495722.1;end_range=253,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044774.1;locus_tag=C9E97_RS11370;partial=true;product=autotransporter-associated beta strand repeat-containing protein;protein_id=WP_135495722.1;start_range=.,1;transl_table=11
##sequence-region NZ_PYKA01000066.1 1 90156
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000066.1	RefSeq	region	1	90156	.	+	.	ID=NZ_PYKA01000066.1:1..90156;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000066.1	RefSeq	gene	79	954	.	+	.	ID=gene-C9E97_RS09940;Name=C9E97_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09940;old_locus_tag=C9E97_10150
NZ_PYKA01000066.1	Protein Homology	CDS	79	954	.	+	0	ID=cds-WP_000921674.1;Parent=gene-C9E97_RS09940;Dbxref=GenBank:WP_000921674.1;Name=WP_000921674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463180.1;locus_tag=C9E97_RS09940;product=AraC family transcriptional regulator;protein_id=WP_000921674.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	951	1238	.	+	.	ID=gene-C9E97_RS09945;Name=rtsB;gbkey=Gene;gene=rtsB;gene_biotype=protein_coding;locus_tag=C9E97_RS09945;old_locus_tag=C9E97_10155
NZ_PYKA01000066.1	Protein Homology	CDS	951	1238	.	+	0	ID=cds-WP_001269916.1;Parent=gene-C9E97_RS09945;Dbxref=GenBank:WP_001269916.1;Name=WP_001269916.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rtsB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463179.3;locus_tag=C9E97_RS09945;product=transcriptional regulator RtsB;protein_id=WP_001269916.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	1231	1413	.	-	.	ID=gene-C9E97_RS23725;Name=C9E97_RS23725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23725;old_locus_tag=C9E97_10160
NZ_PYKA01000066.1	Protein Homology	CDS	1231	1413	.	-	0	ID=cds-WP_001527266.1;Parent=gene-C9E97_RS23725;Dbxref=GenBank:WP_001527266.1;Name=WP_001527266.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.6;locus_tag=C9E97_RS23725;product=ATP-binding cassette domain-containing protein;protein_id=WP_001527266.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	pseudogene	1433	1532	.	+	.	ID=gene-C9E97_RS23730;Name=C9E97_RS23730;end_range=1532,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23730;partial=true;pseudo=true
NZ_PYKA01000066.1	Protein Homology	CDS	1433	1532	.	+	0	ID=cds-C9E97_RS23730;Parent=gene-C9E97_RS23730;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1532,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463178.1;locus_tag=C9E97_RS23730;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKA01000066.1	RefSeq	pseudogene	1640	1774	.	+	.	ID=gene-C9E97_RS23735;Name=C9E97_RS23735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23735;partial=true;pseudo=true;start_range=.,1640
NZ_PYKA01000066.1	Protein Homology	CDS	1640	1774	.	+	0	ID=cds-C9E97_RS23735;Parent=gene-C9E97_RS23735;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=C9E97_RS23735;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1640;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	2068	2973	.	-	.	ID=gene-C9E97_RS09960;Name=C9E97_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09960;old_locus_tag=C9E97_10170
NZ_PYKA01000066.1	Protein Homology	CDS	2068	2973	.	-	0	ID=cds-WP_001268195.1;Parent=gene-C9E97_RS09960;Dbxref=GenBank:WP_001268195.1;Name=WP_001268195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463175.1;locus_tag=C9E97_RS09960;product=SdiA-regulated domain-containing protein;protein_id=WP_001268195.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	3277	4677	.	+	.	ID=gene-C9E97_RS09965;Name=C9E97_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09965;old_locus_tag=C9E97_10175
NZ_PYKA01000066.1	Protein Homology	CDS	3277	4677	.	+	0	ID=cds-WP_135369340.1;Parent=gene-C9E97_RS09965;Dbxref=GenBank:WP_135369340.1;Name=WP_135369340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463174.1;locus_tag=C9E97_RS09965;product=DUF7594 domain-containing protein;protein_id=WP_135369340.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	4761	5354	.	-	.	ID=gene-C9E97_RS09970;Name=C9E97_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09970;old_locus_tag=C9E97_10180
NZ_PYKA01000066.1	Protein Homology	CDS	4761	5354	.	-	0	ID=cds-WP_001519164.1;Parent=gene-C9E97_RS09970;Dbxref=GenBank:WP_001519164.1;Name=WP_001519164.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001629474.1;locus_tag=C9E97_RS09970;product=TorD/DmsD family molecular chaperone;protein_id=WP_001519164.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	5430	6203	.	-	.	ID=gene-C9E97_RS09975;Name=C9E97_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09975;old_locus_tag=C9E97_10185
NZ_PYKA01000066.1	Protein Homology	CDS	5430	6203	.	-	0	ID=cds-WP_000544929.1;Parent=gene-C9E97_RS09975;Dbxref=GenBank:WP_000544929.1;Name=WP_000544929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463172.1;locus_tag=C9E97_RS09975;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000544929.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	6196	6822	.	-	.	ID=gene-C9E97_RS09980;Name=C9E97_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09980;old_locus_tag=C9E97_10190
NZ_PYKA01000066.1	Protein Homology	CDS	6196	6822	.	-	0	ID=cds-WP_000816143.1;Parent=gene-C9E97_RS09980;Dbxref=GenBank:WP_000816143.1;Name=WP_000816143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463171.1;locus_tag=C9E97_RS09980;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_000816143.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	6836	9265	.	-	.	ID=gene-C9E97_RS09985;Name=C9E97_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09985;old_locus_tag=C9E97_10195
NZ_PYKA01000066.1	Protein Homology	CDS	6836	9265	.	-	0	ID=cds-WP_000403480.1;Parent=gene-C9E97_RS09985;Dbxref=GenBank:WP_000403480.1;Name=WP_000403480.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403483.1;locus_tag=C9E97_RS09985;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_000403480.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	9640	11271	.	+	.	ID=gene-C9E97_RS09990;Name=C9E97_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09990;old_locus_tag=C9E97_10200
NZ_PYKA01000066.1	Protein Homology	CDS	9640	11271	.	+	0	ID=cds-WP_048591426.1;Parent=gene-C9E97_RS09990;Dbxref=GenBank:WP_048591426.1;Name=WP_048591426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463169.1;locus_tag=C9E97_RS09990;product=sensor histidine kinase;protein_id=WP_048591426.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	11268	11987	.	+	.	ID=gene-C9E97_RS09995;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=C9E97_RS09995;old_locus_tag=C9E97_10205
NZ_PYKA01000066.1	Protein Homology	CDS	11268	11987	.	+	0	ID=cds-WP_000611307.1;Parent=gene-C9E97_RS09995;Dbxref=GenBank:WP_000611307.1;Name=WP_000611307.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463168.1;locus_tag=C9E97_RS09995;product=two-component system response regulator DcuR;protein_id=WP_000611307.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	12304	12570	.	+	.	ID=gene-C9E97_RS10000;Name=C9E97_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10000;old_locus_tag=C9E97_10210
NZ_PYKA01000066.1	Protein Homology	CDS	12304	12570	.	+	0	ID=cds-WP_024137308.1;Parent=gene-C9E97_RS10000;Dbxref=GenBank:WP_024137308.1;Name=WP_024137308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463167.1;locus_tag=C9E97_RS10000;product=hypothetical protein;protein_id=WP_024137308.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	12717	14057	.	+	.	ID=gene-C9E97_RS10005;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=C9E97_RS10005;old_locus_tag=C9E97_10215
NZ_PYKA01000066.1	Protein Homology	CDS	12717	14057	.	+	0	ID=cds-WP_000899149.1;Parent=gene-C9E97_RS10005;Dbxref=GenBank:WP_000899149.1;Name=WP_000899149.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463166.1;locus_tag=C9E97_RS10005;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_000899149.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	14153	15799	.	+	.	ID=gene-C9E97_RS10010;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=C9E97_RS10010;old_locus_tag=C9E97_10220
NZ_PYKA01000066.1	Protein Homology	CDS	14153	15799	.	+	0	ID=cds-WP_052895238.1;Parent=gene-C9E97_RS10010;Dbxref=GenBank:WP_052895238.1;Name=WP_052895238.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463165.1;locus_tag=C9E97_RS10010;product=class I fumarate hydratase FumA;protein_id=WP_052895238.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	15888	17318	.	-	.	ID=gene-C9E97_RS10015;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=C9E97_RS10015;old_locus_tag=C9E97_10225
NZ_PYKA01000066.1	Protein Homology	CDS	15888	17318	.	-	0	ID=cds-WP_079802101.1;Parent=gene-C9E97_RS10015;Dbxref=GenBank:WP_079802101.1;Name=WP_079802101.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463164.1;locus_tag=C9E97_RS10015;product=melibiose:sodium transporter MelB;protein_id=WP_079802101.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	17402	18757	.	-	.	ID=gene-C9E97_RS10020;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=C9E97_RS10020;old_locus_tag=C9E97_10230
NZ_PYKA01000066.1	Protein Homology	CDS	17402	18757	.	-	0	ID=cds-WP_020437593.1;Parent=gene-C9E97_RS10020;Dbxref=GenBank:WP_020437593.1;Name=WP_020437593.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463163.1;locus_tag=C9E97_RS10020;product=alpha-galactosidase;protein_id=WP_020437593.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	19026	19958	.	+	.	ID=gene-C9E97_RS10025;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=C9E97_RS10025;old_locus_tag=C9E97_10235
NZ_PYKA01000066.1	Protein Homology	CDS	19026	19958	.	+	0	ID=cds-WP_000106992.1;Parent=gene-C9E97_RS10025;Dbxref=GenBank:WP_000106992.1;Name=WP_000106992.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463162.1;locus_tag=C9E97_RS10025;product=transcriptional regulator MelR;protein_id=WP_000106992.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	20191	22458	.	+	.	ID=gene-C9E97_RS10030;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=C9E97_RS10030;old_locus_tag=C9E97_10240
NZ_PYKA01000066.1	Protein Homology	CDS	20191	22458	.	+	0	ID=cds-WP_001542850.1;Parent=gene-C9E97_RS10030;Dbxref=GenBank:WP_001542850.1;Name=WP_001542850.1;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709824.2;locus_tag=C9E97_RS10030;product=arginine decarboxylase;protein_id=WP_001542850.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	22755	23516	.	+	.	ID=gene-C9E97_RS10035;Name=C9E97_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10035;old_locus_tag=C9E97_10245
NZ_PYKA01000066.1	Protein Homology	CDS	22755	23516	.	+	0	ID=cds-WP_023259223.1;Parent=gene-C9E97_RS10035;Dbxref=GenBank:WP_023259223.1;Name=WP_023259223.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463160.1;locus_tag=C9E97_RS10035;product=AraC family transcriptional regulator;protein_id=WP_023259223.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	23656	24993	.	+	.	ID=gene-C9E97_RS10040;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=C9E97_RS10040;old_locus_tag=C9E97_10250
NZ_PYKA01000066.1	Protein Homology	CDS	23656	24993	.	+	0	ID=cds-WP_000093130.1;Parent=gene-C9E97_RS10040;Dbxref=GenBank:WP_000093130.1;Name=WP_000093130.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463159.1;locus_tag=C9E97_RS10040;product=arginine/agmatine antiporter;protein_id=WP_000093130.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	25127	26770	.	+	.	ID=gene-C9E97_RS10045;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=C9E97_RS10045;old_locus_tag=C9E97_10255
NZ_PYKA01000066.1	Protein Homology	CDS	25127	26770	.	+	0	ID=cds-WP_000919290.1;Parent=gene-C9E97_RS10045;Dbxref=GenBank:WP_000919290.1;Name=WP_000919290.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463158.1;locus_tag=C9E97_RS10045;product=phosphoethanolamine transferase EptA;protein_id=WP_000919290.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	26767	27435	.	+	.	ID=gene-C9E97_RS10050;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=C9E97_RS10050;old_locus_tag=C9E97_10260
NZ_PYKA01000066.1	Protein Homology	CDS	26767	27435	.	+	0	ID=cds-WP_000697899.1;Parent=gene-C9E97_RS10050;Dbxref=GenBank:WP_000697899.1;Name=WP_000697899.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463157.1;locus_tag=C9E97_RS10050;product=two-component system response regulator PmrA;protein_id=WP_000697899.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	27445	28515	.	+	.	ID=gene-C9E97_RS10055;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=C9E97_RS10055;old_locus_tag=C9E97_10265
NZ_PYKA01000066.1	Protein Homology	CDS	27445	28515	.	+	0	ID=cds-WP_001212189.1;Parent=gene-C9E97_RS10055;Dbxref=GenBank:WP_001212189.1;Name=WP_001212189.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463156.1;locus_tag=C9E97_RS10055;product=two-component system sensor histidine kinase PmrB;protein_id=WP_001212189.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	28523	28612	.	-	.	ID=gene-C9E97_RS10060;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=C9E97_RS10060;old_locus_tag=C9E97_10270
NZ_PYKA01000066.1	Protein Homology	CDS	28523	28612	.	-	0	ID=cds-WP_000844399.1;Parent=gene-C9E97_RS10060;Dbxref=GenBank:WP_000844399.1;Name=WP_000844399.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844399.1;locus_tag=C9E97_RS10060;product=LpxT activity modulator PmrR;protein_id=WP_000844399.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	28682	30184	.	-	.	ID=gene-C9E97_RS10065;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=C9E97_RS10065;old_locus_tag=C9E97_10275
NZ_PYKA01000066.1	Protein Homology	CDS	28682	30184	.	-	0	ID=cds-WP_000919710.1;Parent=gene-C9E97_RS10065;Dbxref=GenBank:WP_000919710.1;Name=WP_000919710.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463155.1;locus_tag=C9E97_RS10065;product=glycine betaine/L-proline transporter ProP;protein_id=WP_000919710.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	30652	30987	.	+	.	ID=gene-C9E97_RS10070;Name=C9E97_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10070;old_locus_tag=C9E97_10280
NZ_PYKA01000066.1	Protein Homology	CDS	30652	30987	.	+	0	ID=cds-WP_000056482.1;Parent=gene-C9E97_RS10070;Dbxref=GenBank:WP_000056482.1;Name=WP_000056482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463154.1;locus_tag=C9E97_RS10070;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_000056482.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	31107	31550	.	+	.	ID=gene-C9E97_RS10075;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=C9E97_RS10075;old_locus_tag=C9E97_10285
NZ_PYKA01000066.1	Protein Homology	CDS	31107	31550	.	+	0	ID=cds-WP_001131305.1;Parent=gene-C9E97_RS10075;Dbxref=GenBank:WP_001131305.1;Name=WP_001131305.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463153.1;locus_tag=C9E97_RS10075;product=VOC family metalloprotein YjdN;protein_id=WP_001131305.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	31680	32129	.	-	.	ID=gene-C9E97_RS10080;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;gene_synonym=alsI;locus_tag=C9E97_RS10080;old_locus_tag=C9E97_10290
NZ_PYKA01000066.1	Protein Homology	CDS	31680	32129	.	-	0	ID=cds-WP_057935359.1;Parent=gene-C9E97_RS10080;Dbxref=GenBank:WP_057935359.1;Name=WP_057935359.1;gbkey=CDS;gene=rpiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418514.1;locus_tag=C9E97_RS10080;product=bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase RpiB;protein_id=WP_057935359.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	32489	33379	.	+	.	ID=gene-C9E97_RS10085;Name=C9E97_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10085;old_locus_tag=C9E97_10295
NZ_PYKA01000066.1	Protein Homology	CDS	32489	33379	.	+	0	ID=cds-WP_031605717.1;Parent=gene-C9E97_RS10085;Dbxref=GenBank:WP_031605717.1;Name=WP_031605717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418513.4;locus_tag=C9E97_RS10085;product=MurR/RpiR family transcriptional regulator;protein_id=WP_031605717.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	33442	34383	.	+	.	ID=gene-C9E97_RS10090;Name=alsB;gbkey=Gene;gene=alsB;gene_biotype=protein_coding;locus_tag=C9E97_RS10090;old_locus_tag=C9E97_10300
NZ_PYKA01000066.1	Protein Homology	CDS	33442	34383	.	+	0	ID=cds-WP_135369150.1;Parent=gene-C9E97_RS10090;Dbxref=GenBank:WP_135369150.1;Name=WP_135369150.1;gbkey=CDS;gene=alsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418512.1;locus_tag=C9E97_RS10090;product=D-allose transporter substrate-binding protein;protein_id=WP_135369150.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	34503	36035	.	+	.	ID=gene-C9E97_RS10095;Name=alsA;gbkey=Gene;gene=alsA;gene_biotype=protein_coding;locus_tag=C9E97_RS10095;old_locus_tag=C9E97_10305
NZ_PYKA01000066.1	Protein Homology	CDS	34503	36035	.	+	0	ID=cds-WP_031605714.1;Parent=gene-C9E97_RS10095;Dbxref=GenBank:WP_031605714.1;Name=WP_031605714.1;gbkey=CDS;gene=alsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418511.1;locus_tag=C9E97_RS10095;product=D-allose ABC transporter ATP-binding protein AlsA;protein_id=WP_031605714.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	36014	36994	.	+	.	ID=gene-C9E97_RS10100;Name=alsC;gbkey=Gene;gene=alsC;gene_biotype=protein_coding;locus_tag=C9E97_RS10100;old_locus_tag=C9E97_10310
NZ_PYKA01000066.1	Protein Homology	CDS	36014	36994	.	+	0	ID=cds-WP_031605713.1;Parent=gene-C9E97_RS10100;Dbxref=GenBank:WP_031605713.1;Name=WP_031605713.1;gbkey=CDS;gene=alsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418510.1;locus_tag=C9E97_RS10100;product=D-allose ABC transporter permease;protein_id=WP_031605713.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	37005	37700	.	+	.	ID=gene-C9E97_RS10105;Name=alsE;gbkey=Gene;gene=alsE;gene_biotype=protein_coding;locus_tag=C9E97_RS10105;old_locus_tag=C9E97_10315
NZ_PYKA01000066.1	Protein Homology	CDS	37005	37700	.	+	0	ID=cds-WP_031605712.1;Parent=gene-C9E97_RS10105;Dbxref=GenBank:WP_031605712.1;Name=WP_031605712.1;gbkey=CDS;gene=alsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418509.1;locus_tag=C9E97_RS10105;product=D-allulose 6-phosphate 3-epimerase;protein_id=WP_031605712.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	37684	38589	.	+	.	ID=gene-C9E97_RS10110;Name=alsK;gbkey=Gene;gene=alsK;gene_biotype=protein_coding;locus_tag=C9E97_RS10110;old_locus_tag=C9E97_10320
NZ_PYKA01000066.1	Protein Homology	CDS	37684	38589	.	+	0	ID=cds-WP_031605711.1;Parent=gene-C9E97_RS10110;Dbxref=GenBank:WP_031605711.1;Name=WP_031605711.1;Ontology_term=GO:0019316,GO:0019200;gbkey=CDS;gene=alsK;go_function=carbohydrate kinase activity|0019200||IEA;go_process=D-allose catabolic process|0019316||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012907525.1;locus_tag=C9E97_RS10110;product=allose kinase;protein_id=WP_031605711.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	38767	39675	.	+	.	ID=gene-C9E97_RS10115;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=C9E97_RS10115;old_locus_tag=C9E97_10325
NZ_PYKA01000066.1	Protein Homology	CDS	38767	39675	.	+	0	ID=cds-WP_000457024.1;Parent=gene-C9E97_RS10115;Dbxref=GenBank:WP_000457024.1;Name=WP_000457024.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463151.1;locus_tag=C9E97_RS10115;product=lipid A hydroxylase LpxO;protein_id=WP_000457024.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	40030	42177	.	+	.	ID=gene-C9E97_RS10120;Name=C9E97_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10120;old_locus_tag=C9E97_10330
NZ_PYKA01000066.1	Protein Homology	CDS	40030	42177	.	+	0	ID=cds-WP_011233236.1;Parent=gene-C9E97_RS10120;Dbxref=GenBank:WP_011233236.1;Name=WP_011233236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=C9E97_RS10120;product=formate dehydrogenase H subunit alpha%2C selenocysteine-containing;protein_id=WP_011233236.1;transl_except=(pos:40447..40449%2Caa:Sec);transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	42354	43043	.	+	.	ID=gene-C9E97_RS10125;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=C9E97_RS10125;old_locus_tag=C9E97_10335
NZ_PYKA01000066.1	Protein Homology	CDS	42354	43043	.	+	0	ID=cds-WP_000771454.1;Parent=gene-C9E97_RS10125;Dbxref=GenBank:WP_000771454.1;Name=WP_000771454.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463149.1;locus_tag=C9E97_RS10125;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WP_000771454.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	43201	44511	.	-	.	ID=gene-C9E97_RS10135;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=C9E97_RS10135;old_locus_tag=C9E97_10340
NZ_PYKA01000066.1	Protein Homology	CDS	43201	44511	.	-	0	ID=cds-WP_000793278.1;Parent=gene-C9E97_RS10135;Dbxref=GenBank:WP_000793278.1;Name=WP_000793278.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463148.1;locus_tag=C9E97_RS10135;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_000793278.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	44856	45476	.	-	.	ID=gene-C9E97_RS10140;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=C9E97_RS10140;old_locus_tag=C9E97_10345
NZ_PYKA01000066.1	Protein Homology	CDS	44856	45476	.	-	0	ID=cds-WP_023260312.1;Parent=gene-C9E97_RS10140;Dbxref=GenBank:WP_023260312.1;Name=WP_023260312.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463147.1;locus_tag=C9E97_RS10140;product=heme lyase NrfEFG subunit NrfG;protein_id=WP_023260312.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	45473	47695	.	-	.	ID=gene-C9E97_RS10145;Name=nrfEF;gbkey=Gene;gene=nrfEF;gene_biotype=protein_coding;locus_tag=C9E97_RS10145;old_locus_tag=C9E97_10350
NZ_PYKA01000066.1	Protein Homology	CDS	45473	47695	.	-	0	ID=cds-WP_135369151.1;Parent=gene-C9E97_RS10145;Dbxref=GenBank:WP_135369151.1;Name=WP_135369151.1;gbkey=CDS;gene=nrfEF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=C9E97_RS10145;product=heme lyase NrfEFG subunit NrfEF;protein_id=WP_135369151.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	47688	48644	.	-	.	ID=gene-C9E97_RS10150;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=C9E97_RS10150;old_locus_tag=C9E97_10355
NZ_PYKA01000066.1	Protein Homology	CDS	47688	48644	.	-	0	ID=cds-WP_050068059.1;Parent=gene-C9E97_RS10150;Dbxref=GenBank:WP_050068059.1;Name=WP_050068059.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463145.1;locus_tag=C9E97_RS10150;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_050068059.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	48641	49312	.	-	.	ID=gene-C9E97_RS10155;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=C9E97_RS10155;old_locus_tag=C9E97_10360
NZ_PYKA01000066.1	Protein Homology	CDS	48641	49312	.	-	0	ID=cds-WP_001278025.1;Parent=gene-C9E97_RS10155;Dbxref=GenBank:WP_001278025.1;Name=WP_001278025.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463144.1;locus_tag=C9E97_RS10155;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_001278025.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	49309	49875	.	-	.	ID=gene-C9E97_RS10160;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=C9E97_RS10160;old_locus_tag=C9E97_10365
NZ_PYKA01000066.1	Protein Homology	CDS	49309	49875	.	-	0	ID=cds-WP_000115065.1;Parent=gene-C9E97_RS10160;Dbxref=GenBank:WP_000115065.1;Name=WP_000115065.1;Ontology_term=GO:0008152,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=C9E97_RS10160;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_000115065.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	49902	51356	.	-	.	ID=gene-C9E97_RS10165;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=C9E97_RS10165;old_locus_tag=C9E97_10370
NZ_PYKA01000066.1	Protein Homology	CDS	49902	51356	.	-	0	ID=cds-WP_135369152.1;Parent=gene-C9E97_RS10165;Dbxref=GenBank:WP_135369152.1;Name=WP_135369152.1;Ontology_term=GO:0008152,GO:0005509,GO:0020037,GO:0042279,GO:0042597;gbkey=CDS;gene=nrfA;go_component=periplasmic space|0042597||IEA;go_function=calcium ion binding|0005509||IEA,heme binding|0020037||IEA,nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463142.1;locus_tag=C9E97_RS10165;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_135369152.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	51788	53746	.	+	.	ID=gene-C9E97_RS10170;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=C9E97_RS10170;old_locus_tag=C9E97_10380
NZ_PYKA01000066.1	Protein Homology	CDS	51788	53746	.	+	0	ID=cds-WP_000083874.1;Parent=gene-C9E97_RS10170;Dbxref=GenBank:WP_000083874.1;Name=WP_000083874.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463140.1;locus_tag=C9E97_RS10170;product=acetate--CoA ligase;protein_id=WP_000083874.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	53986	54300	.	+	.	ID=gene-C9E97_RS10175;Name=C9E97_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10175;old_locus_tag=C9E97_10390
NZ_PYKA01000066.1	Protein Homology	CDS	53986	54300	.	+	0	ID=cds-WP_000999620.1;Parent=gene-C9E97_RS10175;Dbxref=GenBank:WP_000999620.1;Name=WP_000999620.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463139.1;locus_tag=C9E97_RS10175;product=DUF485 domain-containing protein;protein_id=WP_000999620.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	54297	55946	.	+	.	ID=gene-C9E97_RS10180;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=C9E97_RS10180;old_locus_tag=C9E97_10395
NZ_PYKA01000066.1	Protein Homology	CDS	54297	55946	.	+	0	ID=cds-WP_000832536.1;Parent=gene-C9E97_RS10180;Dbxref=GenBank:WP_000832536.1;Name=WP_000832536.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463138.1;locus_tag=C9E97_RS10180;product=cation/acetate symporter ActP;protein_id=WP_000832536.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	55985	56674	.	-	.	ID=gene-C9E97_RS10185;Name=C9E97_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10185;old_locus_tag=C9E97_10400
NZ_PYKA01000066.1	Protein Homology	CDS	55985	56674	.	-	0	ID=cds-WP_001067096.1;Parent=gene-C9E97_RS10185;Dbxref=GenBank:WP_001067096.1;Name=WP_001067096.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463137.1;locus_tag=C9E97_RS10185;product=LrgB family protein;protein_id=WP_001067096.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	56667	57077	.	-	.	ID=gene-C9E97_RS10190;Name=C9E97_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10190;old_locus_tag=C9E97_10405
NZ_PYKA01000066.1	Protein Homology	CDS	56667	57077	.	-	0	ID=cds-WP_000257347.1;Parent=gene-C9E97_RS10190;Dbxref=GenBank:WP_000257347.1;Name=WP_000257347.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463136.1;locus_tag=C9E97_RS10190;product=CidA/LrgA family protein;protein_id=WP_000257347.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	57181	58068	.	+	.	ID=gene-C9E97_RS10195;Name=C9E97_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10195;old_locus_tag=C9E97_10410
NZ_PYKA01000066.1	Protein Homology	CDS	57181	58068	.	+	0	ID=cds-WP_000354963.1;Parent=gene-C9E97_RS10195;Dbxref=GenBank:WP_000354963.1;Name=WP_000354963.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463135.1;locus_tag=C9E97_RS10195;product=LysR family transcriptional regulator;protein_id=WP_000354963.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	58163	59809	.	-	.	ID=gene-C9E97_RS10200;Name=C9E97_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10200;old_locus_tag=C9E97_10415
NZ_PYKA01000066.1	Protein Homology	CDS	58163	59809	.	-	0	ID=cds-WP_000402189.1;Parent=gene-C9E97_RS10200;Dbxref=GenBank:WP_000402189.1;Name=WP_000402189.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463134.1;locus_tag=C9E97_RS10200;product=Na+/H+ antiporter;protein_id=WP_000402189.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	59959	61308	.	-	.	ID=gene-C9E97_RS10210;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=C9E97_RS10210;old_locus_tag=C9E97_10425
NZ_PYKA01000066.1	Protein Homology	CDS	59959	61308	.	-	0	ID=cds-WP_023236904.1;Parent=gene-C9E97_RS10210;Dbxref=GenBank:WP_023236904.1;Name=WP_023236904.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=C9E97_RS10210;product=guanine/hypoxanthine transporter GhxP;protein_id=WP_023236904.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	61655	62323	.	-	.	ID=gene-C9E97_RS10215;Name=C9E97_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10215;old_locus_tag=C9E97_10435
NZ_PYKA01000066.1	Protein Homology	CDS	61655	62323	.	-	0	ID=cds-WP_135369153.1;Parent=gene-C9E97_RS10215;Dbxref=GenBank:WP_135369153.1;Name=WP_135369153.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463132.1;locus_tag=C9E97_RS10215;product=glutathione S-transferase family protein;protein_id=WP_135369153.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	62616	63074	.	-	.	ID=gene-C9E97_RS10220;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=C9E97_RS10220;old_locus_tag=C9E97_10440
NZ_PYKA01000066.1	Protein Homology	CDS	62616	63074	.	-	0	ID=cds-WP_000412686.1;Parent=gene-C9E97_RS10220;Dbxref=GenBank:WP_000412686.1;Name=WP_000412686.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463131.1;locus_tag=C9E97_RS10220;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412686.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	63161	63484	.	+	.	ID=gene-C9E97_RS10225;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=C9E97_RS10225;old_locus_tag=C9E97_10445
NZ_PYKA01000066.1	Protein Homology	CDS	63161	63484	.	+	0	ID=cds-WP_000019483.1;Parent=gene-C9E97_RS10225;Dbxref=GenBank:WP_000019483.1;Name=WP_000019483.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463130.1;locus_tag=C9E97_RS10225;product=superoxide response transcriptional regulator SoxS;protein_id=WP_000019483.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	63472	65073	.	-	.	ID=gene-C9E97_RS10230;Name=C9E97_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10230;old_locus_tag=C9E97_10450
NZ_PYKA01000066.1	Protein Homology	CDS	63472	65073	.	-	0	ID=cds-WP_020437586.1;Parent=gene-C9E97_RS10230;Dbxref=GenBank:WP_020437586.1;Name=WP_020437586.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463129.1;locus_tag=C9E97_RS10230;product=EAL domain-containing protein;protein_id=WP_020437586.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	65635	65916	.	+	.	ID=gene-C9E97_RS10235;Name=C9E97_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10235;old_locus_tag=C9E97_10455
NZ_PYKA01000066.1	Protein Homology	CDS	65635	65916	.	+	0	ID=cds-WP_000719058.1;Parent=gene-C9E97_RS10235;Dbxref=GenBank:WP_000719058.1;Name=WP_000719058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463128.1;locus_tag=C9E97_RS10235;product=YjcB family protein;protein_id=WP_000719058.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	66194	68260	.	-	.	ID=gene-C9E97_RS10240;Name=siiF;gbkey=Gene;gene=siiF;gene_biotype=protein_coding;locus_tag=C9E97_RS10240;old_locus_tag=C9E97_10460
NZ_PYKA01000066.1	Protein Homology	CDS	66194	68260	.	-	0	ID=cds-WP_000358582.1;Parent=gene-C9E97_RS10240;Dbxref=GenBank:WP_000358582.1;Name=WP_000358582.1;gbkey=CDS;gene=siiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463127.1;locus_tag=C9E97_RS10240;product=SPI-4 type I secretion system protein SiiF;protein_id=WP_000358582.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	68300	84988	.	-	.	ID=gene-C9E97_RS10245;Name=siiE;gbkey=Gene;gene=siiE;gene_biotype=protein_coding;locus_tag=C9E97_RS10245;old_locus_tag=C9E97_10465
NZ_PYKA01000066.1	Protein Homology	CDS	68300	84988	.	-	0	ID=cds-WP_135369218.1;Parent=gene-C9E97_RS10245;Dbxref=GenBank:WP_135369218.1;Name=WP_135369218.1;gbkey=CDS;gene=siiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=C9E97_RS10245;product=non-fimbrial adhesin SiiE;protein_id=WP_135369218.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	85005	86282	.	-	.	ID=gene-C9E97_RS10250;Name=siiD;gbkey=Gene;gene=siiD;gene_biotype=protein_coding;locus_tag=C9E97_RS10250;old_locus_tag=C9E97_10470
NZ_PYKA01000066.1	Protein Homology	CDS	85005	86282	.	-	0	ID=cds-WP_001081935.1;Parent=gene-C9E97_RS10250;Dbxref=GenBank:WP_001081935.1;Name=WP_001081935.1;gbkey=CDS;gene=siiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463125.1;locus_tag=C9E97_RS10250;product=SPI-4 type I secretion system protein SiiD;protein_id=WP_001081935.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	86279	87598	.	-	.	ID=gene-C9E97_RS10255;Name=siiC;gbkey=Gene;gene=siiC;gene_biotype=protein_coding;locus_tag=C9E97_RS10255;old_locus_tag=C9E97_10475
NZ_PYKA01000066.1	Protein Homology	CDS	86279	87598	.	-	0	ID=cds-WP_135369219.1;Parent=gene-C9E97_RS10255;Dbxref=GenBank:WP_135369219.1;Name=WP_135369219.1;gbkey=CDS;gene=siiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463124.1;locus_tag=C9E97_RS10255;product=SPI-4 type I secretion system protein SiiC;protein_id=WP_135369219.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	87588	88976	.	-	.	ID=gene-C9E97_RS10260;Name=C9E97_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10260;old_locus_tag=C9E97_10480
NZ_PYKA01000066.1	Protein Homology	CDS	87588	88976	.	-	0	ID=cds-WP_135369220.1;Parent=gene-C9E97_RS10260;Dbxref=GenBank:WP_135369220.1;Name=WP_135369220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463123.1;locus_tag=C9E97_RS10260;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_135369220.1;transl_table=11
NZ_PYKA01000066.1	RefSeq	gene	88973	89605	.	-	.	ID=gene-C9E97_RS10265;Name=siiA;gbkey=Gene;gene=siiA;gene_biotype=protein_coding;locus_tag=C9E97_RS10265;old_locus_tag=C9E97_10485
NZ_PYKA01000066.1	Protein Homology	CDS	88973	89605	.	-	0	ID=cds-WP_000389232.1;Parent=gene-C9E97_RS10265;Dbxref=GenBank:WP_000389232.1;Name=WP_000389232.1;gbkey=CDS;gene=siiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463122.1;locus_tag=C9E97_RS10265;product=SPI-4 type I secretion system auxiliary protein SiiA;protein_id=WP_000389232.1;transl_table=11
##sequence-region NZ_PYKA01000001.1 1 253
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000001.1	RefSeq	region	1	253	.	+	.	ID=NZ_PYKA01000001.1:1..253;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000001.1	RefSeq	gene	82	168	.	+	.	ID=gene-C9E97_RS00005;Name=C9E97_RS00005;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS00005;old_locus_tag=C9E97_00005
NZ_PYKA01000001.1	tRNAscan-SE	tRNA	82	168	.	+	.	ID=rna-C9E97_RS00005;Parent=gene-C9E97_RS00005;anticodon=(pos:116..118);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS00005;product=tRNA-Leu
NZ_PYKA01000001.1	tRNAscan-SE	exon	82	168	.	+	.	ID=exon-C9E97_RS00005-1;Parent=rna-C9E97_RS00005;anticodon=(pos:116..118);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS00005;product=tRNA-Leu
##sequence-region NZ_PYKA01000010.1 1 251
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000010.1	RefSeq	region	1	251	.	+	.	ID=NZ_PYKA01000010.1:1..251;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
##sequence-region NZ_PYKA01000007.1 1 249
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000007.1	RefSeq	region	1	249	.	+	.	ID=NZ_PYKA01000007.1:1..249;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000007.1	RefSeq	gene	1	152	.	+	.	ID=gene-C9E97_RS00305;Name=C9E97_RS00305;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E97_RS00305;old_locus_tag=C9E97_00315;partial=true;start_range=.,1
NZ_PYKA01000007.1	cmsearch	ncRNA	1	152	.	+	.	ID=rna-C9E97_RS00305;Parent=gene-C9E97_RS00305;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS00305;partial=true;product=RtT sRNA;start_range=.,1
NZ_PYKA01000007.1	cmsearch	exon	1	152	.	+	.	ID=exon-C9E97_RS00305-1;Parent=rna-C9E97_RS00305;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS00305;partial=true;product=RtT sRNA;start_range=.,1
##sequence-region NZ_PYKA01000002.1 1 237
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000002.1	RefSeq	region	1	237	.	+	.	ID=NZ_PYKA01000002.1:1..237;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
##sequence-region NZ_PYKA01000049.1 1 224
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000049.1	RefSeq	region	1	224	.	+	.	ID=NZ_PYKA01000049.1:1..224;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
##sequence-region NZ_PYKA01000102.1 1 223
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000102.1	RefSeq	region	1	223	.	+	.	ID=NZ_PYKA01000102.1:1..223;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000102.1	RefSeq	gene	1	223	.	-	.	ID=gene-C9E97_RS13885;Name=C9E97_RS13885;end_range=223,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9E97_RS13885;old_locus_tag=C9E97_14185;partial=true;start_range=.,1
NZ_PYKA01000102.1	cmsearch	rRNA	1	223	.	-	.	ID=rna-C9E97_RS13885;Parent=gene-C9E97_RS13885;Dbxref=RFAM:RF02541;end_range=223,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS13885;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_PYKA01000102.1	cmsearch	exon	1	223	.	-	.	ID=exon-C9E97_RS13885-1;Parent=rna-C9E97_RS13885;Dbxref=RFAM:RF02541;end_range=223,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS13885;partial=true;product=23S ribosomal RNA;start_range=.,1
##sequence-region NZ_PYKA01000039.1 1 203
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000039.1	RefSeq	region	1	203	.	+	.	ID=NZ_PYKA01000039.1:1..203;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
##sequence-region NZ_PYKA01000059.1 1 83954
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000059.1	RefSeq	region	1	83954	.	+	.	ID=NZ_PYKA01000059.1:1..83954;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000059.1	RefSeq	gene	1	715	.	-	.	ID=gene-C9E97_RS08670;Name=C9E97_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08670;old_locus_tag=C9E97_08870;partial=true;start_range=.,1
NZ_PYKA01000059.1	Protein Homology	CDS	1	715	.	-	0	ID=cds-WP_135495714.1;Parent=gene-C9E97_RS08670;Dbxref=GenBank:WP_135495714.1;Name=WP_135495714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016161606.1;locus_tag=C9E97_RS08670;partial=true;product=hypothetical protein;protein_id=WP_135495714.1;start_range=.,1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	712	2004	.	-	.	ID=gene-C9E97_RS08675;Name=C9E97_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08675;old_locus_tag=C9E97_08875
NZ_PYKA01000059.1	Protein Homology	CDS	712	2004	.	-	0	ID=cds-WP_135369423.1;Parent=gene-C9E97_RS08675;Dbxref=GenBank:WP_135369423.1;Name=WP_135369423.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258717.1;locus_tag=C9E97_RS08675;product=tyrosine-type recombinase/integrase;protein_id=WP_135369423.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	2179	2250	.	-	.	ID=gene-C9E97_RS08680;Name=C9E97_RS08680;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS08680;old_locus_tag=C9E97_08880
NZ_PYKA01000059.1	tRNAscan-SE	tRNA	2179	2250	.	-	.	ID=rna-C9E97_RS08680;Parent=gene-C9E97_RS08680;anticodon=(pos:complement(2215..2217));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS08680;product=tRNA-Arg
NZ_PYKA01000059.1	tRNAscan-SE	exon	2179	2250	.	-	.	ID=exon-C9E97_RS08680-1;Parent=rna-C9E97_RS08680;anticodon=(pos:complement(2215..2217));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS08680;product=tRNA-Arg
NZ_PYKA01000059.1	RefSeq	gene	2326	3267	.	-	.	ID=gene-C9E97_RS08685;Name=C9E97_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08685;old_locus_tag=C9E97_08885
NZ_PYKA01000059.1	Protein Homology	CDS	2326	3267	.	-	0	ID=cds-WP_000377772.1;Parent=gene-C9E97_RS08685;Dbxref=GenBank:WP_000377772.1;Name=WP_000377772.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461335.1;locus_tag=C9E97_RS08685;product=formate/nitrite transporter family protein;protein_id=WP_000377772.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	3556	4311	.	+	.	ID=gene-C9E97_RS08690;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=C9E97_RS08690;old_locus_tag=C9E97_08890
NZ_PYKA01000059.1	Protein Homology	CDS	3556	4311	.	+	0	ID=cds-WP_000776787.1;Parent=gene-C9E97_RS08690;Dbxref=GenBank:WP_000776787.1;Name=WP_000776787.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461334.1;locus_tag=C9E97_RS08690;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_000776787.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	4372	5679	.	-	.	ID=gene-C9E97_RS08695;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=C9E97_RS08695;old_locus_tag=C9E97_08895
NZ_PYKA01000059.1	Protein Homology	CDS	4372	5679	.	-	0	ID=cds-WP_001518618.1;Parent=gene-C9E97_RS08695;Dbxref=GenBank:WP_001518618.1;Name=WP_001518618.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=C9E97_RS08695;product=long-chain fatty acid transporter FadL;protein_id=WP_001518618.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	6050	6334	.	+	.	ID=gene-C9E97_RS08700;Name=C9E97_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08700;old_locus_tag=C9E97_08900
NZ_PYKA01000059.1	Protein Homology	CDS	6050	6334	.	+	0	ID=cds-WP_000030904.1;Parent=gene-C9E97_RS08700;Dbxref=GenBank:WP_000030904.1;Name=WP_000030904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=C9E97_RS08700;product=YfcZ/YiiS family protein;protein_id=WP_000030904.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	6512	7822	.	+	.	ID=gene-C9E97_RS08705;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=C9E97_RS08705;old_locus_tag=C9E97_08905
NZ_PYKA01000059.1	Protein Homology	CDS	6512	7822	.	+	0	ID=cds-WP_135369422.1;Parent=gene-C9E97_RS08705;Dbxref=GenBank:WP_135369422.1;Name=WP_135369422.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadI;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461331.2;locus_tag=C9E97_RS08705;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_135369422.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	7822	9969	.	+	.	ID=gene-C9E97_RS08710;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=C9E97_RS08710;old_locus_tag=C9E97_08910
NZ_PYKA01000059.1	Protein Homology	CDS	7822	9969	.	+	0	ID=cds-WP_135369421.1;Parent=gene-C9E97_RS08710;Dbxref=GenBank:WP_135369421.1;Name=WP_135369421.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461330.1;locus_tag=C9E97_RS08710;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_135369421.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	10178	10663	.	+	.	ID=gene-C9E97_RS08715;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=C9E97_RS08715;old_locus_tag=C9E97_08915
NZ_PYKA01000059.1	Protein Homology	CDS	10178	10663	.	+	0	ID=cds-WP_001195800.1;Parent=gene-C9E97_RS08715;Dbxref=GenBank:WP_001195800.1;Name=WP_001195800.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=C9E97_RS08715;product=phosphohistidine phosphatase SixA;protein_id=WP_001195800.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	10763	11314	.	-	.	ID=gene-C9E97_RS08720;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=C9E97_RS08720;old_locus_tag=C9E97_08920
NZ_PYKA01000059.1	Protein Homology	CDS	10763	11314	.	-	0	ID=cds-WP_000730794.1;Parent=gene-C9E97_RS08720;Dbxref=GenBank:WP_000730794.1;Name=WP_000730794.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461328.1;locus_tag=C9E97_RS08720;product=endonuclease SmrB;protein_id=WP_000730794.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	11480	12412	.	+	.	ID=gene-C9E97_RS08725;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=C9E97_RS08725;old_locus_tag=C9E97_08925
NZ_PYKA01000059.1	Protein Homology	CDS	11480	12412	.	+	0	ID=cds-WP_001542329.1;Parent=gene-C9E97_RS08725;Dbxref=GenBank:WP_001542329.1;Name=WP_001542329.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=C9E97_RS08725;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_001542329.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	12448	13533	.	+	.	ID=gene-C9E97_RS08730;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=C9E97_RS08730;old_locus_tag=C9E97_08930
NZ_PYKA01000059.1	Protein Homology	CDS	12448	13533	.	+	0	ID=cds-WP_000918457.1;Parent=gene-C9E97_RS08730;Dbxref=GenBank:WP_000918457.1;Name=WP_000918457.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=C9E97_RS08730;product=chorismate synthase;protein_id=WP_000918457.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	13537	14361	.	+	.	ID=gene-C9E97_RS08735;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=C9E97_RS08735;old_locus_tag=C9E97_08935
NZ_PYKA01000059.1	Protein Homology	CDS	13537	14361	.	+	0	ID=cds-WP_000750428.1;Parent=gene-C9E97_RS08735;Dbxref=GenBank:WP_000750428.1;Name=WP_000750428.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461325.1;locus_tag=C9E97_RS08735;product=penicillin-insensitive murein endopeptidase;protein_id=WP_000750428.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	14361	15170	.	+	.	ID=gene-C9E97_RS08740;Name=C9E97_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08740;old_locus_tag=C9E97_08940
NZ_PYKA01000059.1	Protein Homology	CDS	14361	15170	.	+	0	ID=cds-WP_000368599.1;Parent=gene-C9E97_RS08740;Dbxref=GenBank:WP_000368599.1;Name=WP_000368599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461324.1;locus_tag=C9E97_RS08740;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000368599.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	15170	15718	.	+	.	ID=gene-C9E97_RS08745;Name=C9E97_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08745;old_locus_tag=C9E97_08945
NZ_PYKA01000059.1	Protein Homology	CDS	15170	15718	.	+	0	ID=cds-WP_001066345.1;Parent=gene-C9E97_RS08745;Dbxref=GenBank:WP_001066345.1;Name=WP_001066345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461323.1;locus_tag=C9E97_RS08745;product=elongation factor P hydroxylase;protein_id=WP_001066345.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	15751	16026	.	+	.	ID=gene-C9E97_RS08750;Name=C9E97_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08750;old_locus_tag=C9E97_08950
NZ_PYKA01000059.1	Protein Homology	CDS	15751	16026	.	+	0	ID=cds-WP_000559749.1;Parent=gene-C9E97_RS08750;Dbxref=GenBank:WP_000559749.1;Name=WP_000559749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461322.1;locus_tag=C9E97_RS08750;product=YfcL family protein;protein_id=WP_000559749.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	16078	18078	.	-	.	ID=gene-C9E97_RS08755;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=C9E97_RS08755;old_locus_tag=C9E97_08955
NZ_PYKA01000059.1	Protein Homology	CDS	16078	18078	.	-	0	ID=cds-WP_167850512.1;Parent=gene-C9E97_RS08755;Dbxref=GenBank:WP_167850512.1;Name=WP_167850512.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540542.1;locus_tag=C9E97_RS08755;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_167850512.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	18238	19452	.	+	.	ID=gene-C9E97_RS08760;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=C9E97_RS08760;old_locus_tag=C9E97_08960
NZ_PYKA01000059.1	Protein Homology	CDS	18238	19452	.	+	0	ID=cds-WP_000817159.1;Parent=gene-C9E97_RS08760;Dbxref=GenBank:WP_000817159.1;Name=WP_000817159.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461320.1;locus_tag=C9E97_RS08760;product=beta-ketoacyl-ACP synthase I;protein_id=WP_000817159.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	19550	20206	.	+	.	ID=gene-C9E97_RS08765;Name=C9E97_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08765;old_locus_tag=C9E97_08965
NZ_PYKA01000059.1	Protein Homology	CDS	19550	20206	.	+	0	ID=cds-WP_001142900.1;Parent=gene-C9E97_RS08765;Dbxref=GenBank:WP_001142900.1;Name=WP_001142900.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461319.1;locus_tag=C9E97_RS08765;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_001142900.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	20273	20791	.	-	.	ID=gene-C9E97_RS08770;Name=C9E97_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08770;old_locus_tag=C9E97_08970
NZ_PYKA01000059.1	Protein Homology	CDS	20273	20791	.	-	0	ID=cds-WP_000847542.1;Parent=gene-C9E97_RS08770;Dbxref=GenBank:WP_000847542.1;Name=WP_000847542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461318.1;locus_tag=C9E97_RS08770;product=YbjP/YqhG family protein;protein_id=WP_000847542.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	20791	21159	.	-	.	ID=gene-C9E97_RS08775;Name=C9E97_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08775;old_locus_tag=C9E97_08975
NZ_PYKA01000059.1	Protein Homology	CDS	20791	21159	.	-	0	ID=cds-WP_000118257.1;Parent=gene-C9E97_RS08775;Dbxref=GenBank:WP_000118257.1;Name=WP_000118257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461317.1;locus_tag=C9E97_RS08775;product=NlpC/P60 family protein;protein_id=WP_000118257.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	21328	21576	.	-	.	ID=gene-C9E97_RS08780;Name=C9E97_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08780;old_locus_tag=C9E97_08980
NZ_PYKA01000059.1	Protein Homology	CDS	21328	21576	.	-	0	ID=cds-WP_000433426.1;Parent=gene-C9E97_RS08780;Dbxref=GenBank:WP_000433426.1;Name=WP_000433426.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461316.1;locus_tag=C9E97_RS08780;product=helix-turn-helix domain-containing protein;protein_id=WP_000433426.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	21749	22123	.	+	.	ID=gene-C9E97_RS08785;Name=C9E97_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08785;old_locus_tag=C9E97_08985
NZ_PYKA01000059.1	Protein Homology	CDS	21749	22123	.	+	0	ID=cds-WP_001051266.1;Parent=gene-C9E97_RS08785;Dbxref=GenBank:WP_001051266.1;Name=WP_001051266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461315.1;locus_tag=C9E97_RS08785;product=hypothetical protein;protein_id=WP_001051266.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	22302	23480	.	+	.	ID=gene-C9E97_RS08790;Name=C9E97_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08790;old_locus_tag=C9E97_08990
NZ_PYKA01000059.1	Protein Homology	CDS	22302	23480	.	+	0	ID=cds-WP_000127720.1;Parent=gene-C9E97_RS08790;Dbxref=GenBank:WP_000127720.1;Name=WP_000127720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461314.1;locus_tag=C9E97_RS08790;product=MFS transporter;protein_id=WP_000127720.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	23477	24478	.	-	.	ID=gene-C9E97_RS08795;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=C9E97_RS08795;old_locus_tag=C9E97_08995
NZ_PYKA01000059.1	Protein Homology	CDS	23477	24478	.	-	0	ID=cds-WP_000553395.1;Parent=gene-C9E97_RS08795;Dbxref=GenBank:WP_000553395.1;Name=WP_000553395.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461313.1;locus_tag=C9E97_RS08795;product=flagella biosynthesis regulator Flk;protein_id=WP_000553395.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	24582	25718	.	+	.	ID=gene-C9E97_RS08800;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=C9E97_RS08800;old_locus_tag=C9E97_09000
NZ_PYKA01000059.1	Protein Homology	CDS	24582	25718	.	+	0	ID=cds-WP_000699176.1;Parent=gene-C9E97_RS08800;Dbxref=GenBank:WP_000699176.1;Name=WP_000699176.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461312.1;locus_tag=C9E97_RS08800;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_000699176.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	25786	26799	.	+	.	ID=gene-C9E97_RS08805;Name=C9E97_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08805;old_locus_tag=C9E97_09005
NZ_PYKA01000059.1	Protein Homology	CDS	25786	26799	.	+	0	ID=cds-WP_001289138.1;Parent=gene-C9E97_RS08805;Dbxref=GenBank:WP_001289138.1;Name=WP_001289138.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461311.1;locus_tag=C9E97_RS08805;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_001289138.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	26799	27611	.	+	.	ID=gene-C9E97_RS08810;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=C9E97_RS08810;old_locus_tag=C9E97_09010
NZ_PYKA01000059.1	Protein Homology	CDS	26799	27611	.	+	0	ID=cds-WP_000016631.1;Parent=gene-C9E97_RS08810;Dbxref=GenBank:WP_000016631.1;Name=WP_000016631.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461310.1;locus_tag=C9E97_RS08810;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_000016631.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	27660	28319	.	+	.	ID=gene-C9E97_RS08815;Name=C9E97_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08815;old_locus_tag=C9E97_09015
NZ_PYKA01000059.1	Protein Homology	CDS	27660	28319	.	+	0	ID=cds-WP_000364318.1;Parent=gene-C9E97_RS08815;Dbxref=GenBank:WP_000364318.1;Name=WP_000364318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461309.1;locus_tag=C9E97_RS08815;product=DedA family protein;protein_id=WP_000364318.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	28469	29383	.	+	.	ID=gene-C9E97_RS08820;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=C9E97_RS08820;old_locus_tag=C9E97_09020
NZ_PYKA01000059.1	Protein Homology	CDS	28469	29383	.	+	0	ID=cds-WP_000118383.1;Parent=gene-C9E97_RS08820;Dbxref=GenBank:WP_000118383.1;Name=WP_000118383.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461308.1;locus_tag=C9E97_RS08820;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_000118383.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	29451	30719	.	+	.	ID=gene-C9E97_RS08825;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=C9E97_RS08825;old_locus_tag=C9E97_09025
NZ_PYKA01000059.1	Protein Homology	CDS	29451	30719	.	+	0	ID=cds-WP_000792289.1;Parent=gene-C9E97_RS08825;Dbxref=GenBank:WP_000792289.1;Name=WP_000792289.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461307.1;locus_tag=C9E97_RS08825;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_000792289.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	30709	31383	.	+	.	ID=gene-C9E97_RS08830;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=C9E97_RS08830;old_locus_tag=C9E97_09030
NZ_PYKA01000059.1	Protein Homology	CDS	30709	31383	.	+	0	ID=cds-WP_000157035.1;Parent=gene-C9E97_RS08830;Dbxref=GenBank:WP_000157035.1;Name=WP_000157035.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461306.1;locus_tag=C9E97_RS08830;product=cell division protein DedD;protein_id=WP_000157035.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	31694	32182	.	+	.	ID=gene-C9E97_RS08835;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=C9E97_RS08835;old_locus_tag=C9E97_09035
NZ_PYKA01000059.1	Protein Homology	CDS	31694	32182	.	+	0	ID=cds-WP_000262102.1;Parent=gene-C9E97_RS08835;Dbxref=GenBank:WP_000262102.1;Name=WP_000262102.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461305.1;locus_tag=C9E97_RS08835;product=colicin V production protein;protein_id=WP_000262102.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	32220	33737	.	+	.	ID=gene-C9E97_RS08840;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=C9E97_RS08840;old_locus_tag=C9E97_09040
NZ_PYKA01000059.1	Protein Homology	CDS	32220	33737	.	+	0	ID=cds-WP_000334205.1;Parent=gene-C9E97_RS08840;Dbxref=GenBank:WP_000334205.1;Name=WP_000334205.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=C9E97_RS08840;product=amidophosphoribosyltransferase;protein_id=WP_000334205.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	33773	35200	.	-	.	ID=gene-C9E97_RS08845;Name=C9E97_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08845;old_locus_tag=C9E97_09045
NZ_PYKA01000059.1	Protein Homology	CDS	33773	35200	.	-	0	ID=cds-WP_000168922.1;Parent=gene-C9E97_RS08845;Dbxref=GenBank:WP_000168922.1;Name=WP_000168922.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461303.1;locus_tag=C9E97_RS08845;product=sigma-54 interaction domain-containing protein;protein_id=WP_000168922.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	35411	36808	.	+	.	ID=gene-C9E97_RS08850;Name=C9E97_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08850;old_locus_tag=C9E97_09050
NZ_PYKA01000059.1	Protein Homology	CDS	35411	36808	.	+	0	ID=cds-WP_000132305.1;Parent=gene-C9E97_RS08850;Dbxref=GenBank:WP_000132305.1;Name=WP_000132305.1;Ontology_term=GO:0016831,GO:0030170;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461302.1;locus_tag=C9E97_RS08850;product=diaminopimelate decarboxylase family protein;protein_id=WP_000132305.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	36899	38320	.	+	.	ID=gene-C9E97_RS08855;Name=C9E97_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08855;old_locus_tag=C9E97_09055
NZ_PYKA01000059.1	Protein Homology	CDS	36899	38320	.	+	0	ID=cds-WP_000072512.1;Parent=gene-C9E97_RS08855;Dbxref=GenBank:WP_000072512.1;Name=WP_000072512.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461301.1;locus_tag=C9E97_RS08855;product=APC family permease;protein_id=WP_000072512.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	38322	39425	.	+	.	ID=gene-C9E97_RS08860;Name=C9E97_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08860;old_locus_tag=C9E97_09060
NZ_PYKA01000059.1	Protein Homology	CDS	38322	39425	.	+	0	ID=cds-WP_000281907.1;Parent=gene-C9E97_RS08860;Dbxref=GenBank:WP_000281907.1;Name=WP_000281907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461300.1;locus_tag=C9E97_RS08860;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=WP_000281907.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	39489	40895	.	+	.	ID=gene-C9E97_RS08865;Name=C9E97_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08865;old_locus_tag=C9E97_09065
NZ_PYKA01000059.1	Protein Homology	CDS	39489	40895	.	+	0	ID=cds-WP_000380356.1;Parent=gene-C9E97_RS08865;Dbxref=GenBank:WP_000380356.1;Name=WP_000380356.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461299.1;locus_tag=C9E97_RS08865;product=amino acid permease;protein_id=WP_000380356.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	40922	41491	.	+	.	ID=gene-C9E97_RS08870;Name=C9E97_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08870;old_locus_tag=C9E97_09070
NZ_PYKA01000059.1	Protein Homology	CDS	40922	41491	.	+	0	ID=cds-WP_050067770.1;Parent=gene-C9E97_RS08870;Dbxref=GenBank:WP_050067770.1;Name=WP_050067770.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461298.1;locus_tag=C9E97_RS08870;product=UbiX family flavin prenyltransferase;protein_id=WP_050067770.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	41781	42563	.	+	.	ID=gene-C9E97_RS08875;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=C9E97_RS08875;old_locus_tag=C9E97_09075
NZ_PYKA01000059.1	Protein Homology	CDS	41781	42563	.	+	0	ID=cds-WP_000754423.1;Parent=gene-C9E97_RS08875;Dbxref=GenBank:WP_000754423.1;Name=WP_000754423.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461297.1;locus_tag=C9E97_RS08875;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_000754423.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	42801	43583	.	+	.	ID=gene-C9E97_RS08880;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=C9E97_RS08880;old_locus_tag=C9E97_09080
NZ_PYKA01000059.1	Protein Homology	CDS	42801	43583	.	+	0	ID=cds-WP_000731868.1;Parent=gene-C9E97_RS08880;Dbxref=GenBank:WP_000731868.1;Name=WP_000731868.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461296.1;locus_tag=C9E97_RS08880;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_000731868.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	43764	44450	.	+	.	ID=gene-C9E97_RS08885;Name=C9E97_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08885;old_locus_tag=C9E97_09085
NZ_PYKA01000059.1	Protein Homology	CDS	43764	44450	.	+	0	ID=cds-WP_000965498.1;Parent=gene-C9E97_RS08885;Dbxref=GenBank:WP_000965498.1;Name=WP_000965498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=C9E97_RS08885;product=histidine ABC transporter permease HisQ;protein_id=WP_000965498.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	44447	45154	.	+	.	ID=gene-C9E97_RS08890;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=C9E97_RS08890;old_locus_tag=C9E97_09090
NZ_PYKA01000059.1	Protein Homology	CDS	44447	45154	.	+	0	ID=cds-WP_000569771.1;Parent=gene-C9E97_RS08890;Dbxref=GenBank:WP_000569771.1;Name=WP_000569771.1;gbkey=CDS;gene=hisM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461294.1;locus_tag=C9E97_RS08890;product=histidine ABC transporter permease HisM;protein_id=WP_000569771.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	45168	45941	.	+	.	ID=gene-C9E97_RS08895;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=C9E97_RS08895;old_locus_tag=C9E97_09095
NZ_PYKA01000059.1	Protein Homology	CDS	45168	45941	.	+	0	ID=cds-WP_001293591.1;Parent=gene-C9E97_RS08895;Dbxref=GenBank:WP_001293591.1;Name=WP_001293591.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=C9E97_RS08895;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_001293591.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	45993	46886	.	-	.	ID=gene-C9E97_RS08900;Name=C9E97_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08900;old_locus_tag=C9E97_09100
NZ_PYKA01000059.1	Protein Homology	CDS	45993	46886	.	-	0	ID=cds-WP_001166274.1;Parent=gene-C9E97_RS08900;Dbxref=GenBank:WP_001166274.1;Name=WP_001166274.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461292.1;locus_tag=C9E97_RS08900;product=TIGR01777 family oxidoreductase;protein_id=WP_001166274.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	47012	47659	.	-	.	ID=gene-C9E97_RS08905;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=C9E97_RS08905;old_locus_tag=C9E97_09105
NZ_PYKA01000059.1	Protein Homology	CDS	47012	47659	.	-	0	ID=cds-WP_000566563.1;Parent=gene-C9E97_RS08905;Dbxref=GenBank:WP_000566563.1;Name=WP_000566563.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461291.1;locus_tag=C9E97_RS08905;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_000566563.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	47802	48446	.	+	.	ID=gene-C9E97_RS08910;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=C9E97_RS08910;old_locus_tag=C9E97_09110
NZ_PYKA01000059.1	Protein Homology	CDS	47802	48446	.	+	0	ID=cds-WP_000043012.1;Parent=gene-C9E97_RS08910;Dbxref=GenBank:WP_000043012.1;Name=WP_000043012.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461290.1;locus_tag=C9E97_RS08910;product=glutathione transferase;protein_id=WP_000043012.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	48502	49053	.	+	.	ID=gene-C9E97_RS08915;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=C9E97_RS08915;old_locus_tag=C9E97_09115
NZ_PYKA01000059.1	Protein Homology	CDS	48502	49053	.	+	0	ID=cds-WP_000772458.1;Parent=gene-C9E97_RS08915;Dbxref=GenBank:WP_000772458.1;Name=WP_000772458.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461289.1;locus_tag=C9E97_RS08915;product=phosphodiesterase;protein_id=WP_000772458.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	49110	49664	.	+	.	ID=gene-C9E97_RS08920;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=C9E97_RS08920;old_locus_tag=C9E97_09120
NZ_PYKA01000059.1	Protein Homology	CDS	49110	49664	.	+	0	ID=cds-WP_000230215.1;Parent=gene-C9E97_RS08920;Dbxref=GenBank:WP_000230215.1;Name=WP_000230215.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461288.1;locus_tag=C9E97_RS08920;product=NUDIX hydrolase YfcD;protein_id=WP_000230215.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	49670	50689	.	-	.	ID=gene-C9E97_RS08925;Name=C9E97_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08925;old_locus_tag=C9E97_09125
NZ_PYKA01000059.1	Protein Homology	CDS	49670	50689	.	-	0	ID=cds-WP_000026949.1;Parent=gene-C9E97_RS08925;Dbxref=GenBank:WP_000026949.1;Name=WP_000026949.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=C9E97_RS08925;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000026949.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	50942	51385	.	+	.	ID=gene-C9E97_RS08935;Name=C9E97_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08935;old_locus_tag=C9E97_09135
NZ_PYKA01000059.1	Protein Homology	CDS	50942	51385	.	+	0	ID=cds-WP_000901813.1;Parent=gene-C9E97_RS08935;Dbxref=GenBank:WP_000901813.1;Name=WP_000901813.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461286.1;locus_tag=C9E97_RS08935;product=PTS sugar transporter subunit IIA;protein_id=WP_000901813.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	51466	51738	.	+	.	ID=gene-C9E97_RS08940;Name=C9E97_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08940;old_locus_tag=C9E97_09140
NZ_PYKA01000059.1	Protein Homology	CDS	51466	51738	.	+	0	ID=cds-WP_000699818.1;Parent=gene-C9E97_RS08940;Dbxref=GenBank:WP_000699818.1;Name=WP_000699818.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461285.1;locus_tag=C9E97_RS08940;product=PTS sugar transporter subunit IIB;protein_id=WP_000699818.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	51759	53150	.	+	.	ID=gene-C9E97_RS08945;Name=C9E97_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08945;old_locus_tag=C9E97_09145
NZ_PYKA01000059.1	Protein Homology	CDS	51759	53150	.	+	0	ID=cds-WP_001518515.1;Parent=gene-C9E97_RS08945;Dbxref=GenBank:WP_001518515.1;Name=WP_001518515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461284.3;locus_tag=C9E97_RS08945;product=PTS ascorbate transporter subunit IIC;protein_id=WP_001518515.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	53147	53977	.	+	.	ID=gene-C9E97_RS08950;Name=C9E97_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08950;old_locus_tag=C9E97_09150
NZ_PYKA01000059.1	Protein Homology	CDS	53147	53977	.	+	0	ID=cds-WP_001103265.1;Parent=gene-C9E97_RS08950;Dbxref=GenBank:WP_001103265.1;Name=WP_001103265.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=C9E97_RS08950;product=transketolase;protein_id=WP_001103265.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	53970	54923	.	+	.	ID=gene-C9E97_RS08955;Name=C9E97_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08955;old_locus_tag=C9E97_09155
NZ_PYKA01000059.1	Protein Homology	CDS	53970	54923	.	+	0	ID=cds-WP_000593018.1;Parent=gene-C9E97_RS08955;Dbxref=GenBank:WP_000593018.1;Name=WP_000593018.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461282.1;locus_tag=C9E97_RS08955;product=transketolase family protein;protein_id=WP_000593018.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	54972	56492	.	-	.	ID=gene-C9E97_RS08960;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=C9E97_RS08960;old_locus_tag=C9E97_09160
NZ_PYKA01000059.1	Protein Homology	CDS	54972	56492	.	-	0	ID=cds-WP_000117932.1;Parent=gene-C9E97_RS08960;Dbxref=GenBank:WP_000117932.1;Name=WP_000117932.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461281.1;locus_tag=C9E97_RS08960;product=putative basic amino acid antiporter YfcC;protein_id=WP_000117932.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	56710	58854	.	-	.	ID=gene-C9E97_RS08965;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=C9E97_RS08965;old_locus_tag=C9E97_09165
NZ_PYKA01000059.1	Protein Homology	CDS	56710	58854	.	-	0	ID=cds-WP_000086692.1;Parent=gene-C9E97_RS08965;Dbxref=GenBank:WP_000086692.1;Name=WP_000086692.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461280.1;locus_tag=C9E97_RS08965;product=phosphate acetyltransferase;protein_id=WP_000086692.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	58931	60133	.	-	.	ID=gene-C9E97_RS08970;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=C9E97_RS08970;old_locus_tag=C9E97_09170
NZ_PYKA01000059.1	Protein Homology	CDS	58931	60133	.	-	0	ID=cds-WP_000095689.1;Parent=gene-C9E97_RS08970;Dbxref=GenBank:WP_000095689.1;Name=WP_000095689.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=C9E97_RS08970;product=acetate kinase;protein_id=WP_000095689.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	60473	60928	.	+	.	ID=gene-C9E97_RS08980;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=C9E97_RS08980;old_locus_tag=C9E97_09175
NZ_PYKA01000059.1	Protein Homology	CDS	60473	60928	.	+	0	ID=cds-WP_000106617.1;Parent=gene-C9E97_RS08980;Dbxref=GenBank:WP_000106617.1;Name=WP_000106617.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=C9E97_RS08980;product=terminus macrodomain insulation protein YfbV;protein_id=WP_000106617.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	61011	61505	.	+	.	ID=gene-C9E97_RS08985;Name=C9E97_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08985;old_locus_tag=C9E97_09180
NZ_PYKA01000059.1	Protein Homology	CDS	61011	61505	.	+	0	ID=cds-WP_000426135.1;Parent=gene-C9E97_RS08985;Dbxref=GenBank:WP_000426135.1;Name=WP_000426135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=C9E97_RS08985;product=YfbU family protein;protein_id=WP_000426135.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	61498	62175	.	+	.	ID=gene-C9E97_RS08990;Name=C9E97_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08990;old_locus_tag=C9E97_09185
NZ_PYKA01000059.1	Protein Homology	CDS	61498	62175	.	+	0	ID=cds-WP_001555201.1;Parent=gene-C9E97_RS08990;Dbxref=GenBank:WP_001555201.1;Name=WP_001555201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461276.3;locus_tag=C9E97_RS08990;product=sugar phosphatase;protein_id=WP_001555201.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	62252	64078	.	+	.	ID=gene-C9E97_RS08995;Name=C9E97_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08995;old_locus_tag=C9E97_09190
NZ_PYKA01000059.1	Protein Homology	CDS	62252	64078	.	+	0	ID=cds-WP_001012857.1;Parent=gene-C9E97_RS08995;Dbxref=GenBank:WP_001012857.1;Name=WP_001012857.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=C9E97_RS08995;product=SLC13 family permease;protein_id=WP_001012857.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	64170	64769	.	-	.	ID=gene-C9E97_RS09005;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=C9E97_RS09005;old_locus_tag=C9E97_09195
NZ_PYKA01000059.1	Protein Homology	CDS	64170	64769	.	-	0	ID=cds-WP_000813882.1;Parent=gene-C9E97_RS09005;Dbxref=GenBank:WP_000813882.1;Name=WP_000813882.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461274.1;locus_tag=C9E97_RS09005;product=5'-deoxynucleotidase;protein_id=WP_000813882.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	64863	66077	.	-	.	ID=gene-C9E97_RS09010;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=C9E97_RS09010;old_locus_tag=C9E97_09200
NZ_PYKA01000059.1	Protein Homology	CDS	64863	66077	.	-	0	ID=cds-WP_000074540.1;Parent=gene-C9E97_RS09010;Dbxref=GenBank:WP_000074540.1;Name=WP_000074540.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461273.1;locus_tag=C9E97_RS09010;product=alanine transaminase AlaA;protein_id=WP_000074540.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	67010	67948	.	+	.	ID=gene-C9E97_RS09020;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=C9E97_RS09020;old_locus_tag=C9E97_09210
NZ_PYKA01000059.1	Protein Homology	CDS	67010	67948	.	+	0	ID=cds-WP_000606288.1;Parent=gene-C9E97_RS09020;Dbxref=GenBank:WP_000606288.1;Name=WP_000606288.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461272.1;locus_tag=C9E97_RS09020;product=transcriptional regulator LrhA;protein_id=WP_000606288.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	68028	68180	.	+	.	ID=gene-C9E97_RS09025;Name=C9E97_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09025;old_locus_tag=C9E97_09215
NZ_PYKA01000059.1	Protein Homology	CDS	68028	68180	.	+	0	ID=cds-WP_001522276.1;Parent=gene-C9E97_RS09025;Dbxref=GenBank:WP_001522276.1;Name=WP_001522276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461271.1;locus_tag=C9E97_RS09025;product=STM2329 family putative cytoplasmic protein;protein_id=WP_001522276.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	68575	69018	.	+	.	ID=gene-C9E97_RS09030;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=C9E97_RS09030;old_locus_tag=C9E97_09220
NZ_PYKA01000059.1	Protein Homology	CDS	68575	69018	.	+	0	ID=cds-WP_000062993.1;Parent=gene-C9E97_RS09030;Dbxref=GenBank:WP_000062993.1;Name=WP_000062993.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461270.1;locus_tag=C9E97_RS09030;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_000062993.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	69034	69696	.	+	.	ID=gene-C9E97_RS09035;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=C9E97_RS09035;old_locus_tag=C9E97_09225
NZ_PYKA01000059.1	Protein Homology	CDS	69034	69696	.	+	0	ID=cds-WP_000386728.1;Parent=gene-C9E97_RS09035;Dbxref=GenBank:WP_000386728.1;Name=WP_000386728.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461269.1;locus_tag=C9E97_RS09035;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_000386728.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	69783	71585	.	+	.	ID=gene-C9E97_RS09040;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=C9E97_RS09040;old_locus_tag=C9E97_09230
NZ_PYKA01000059.1	Protein Homology	CDS	69783	71585	.	+	0	ID=cds-WP_000247855.1;Parent=gene-C9E97_RS09040;Dbxref=GenBank:WP_000247855.1;Name=WP_000247855.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461268.1;locus_tag=C9E97_RS09040;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_000247855.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	71588	72088	.	+	.	ID=gene-C9E97_RS09045;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=C9E97_RS09045;old_locus_tag=C9E97_09235
NZ_PYKA01000059.1	Protein Homology	CDS	71588	72088	.	+	0	ID=cds-WP_000545038.1;Parent=gene-C9E97_RS09045;Dbxref=GenBank:WP_000545038.1;Name=WP_000545038.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461267.1;locus_tag=C9E97_RS09045;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_000545038.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	72085	73422	.	+	.	ID=gene-C9E97_RS09050;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=C9E97_RS09050;old_locus_tag=C9E97_09240
NZ_PYKA01000059.1	Protein Homology	CDS	72085	73422	.	+	0	ID=cds-WP_000800048.1;Parent=gene-C9E97_RS09050;Dbxref=GenBank:WP_000800048.1;Name=WP_000800048.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461266.1;locus_tag=C9E97_RS09050;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_000800048.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	73453	76179	.	+	.	ID=gene-C9E97_RS09055;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=C9E97_RS09055;old_locus_tag=C9E97_09245
NZ_PYKA01000059.1	Protein Homology	CDS	73453	76179	.	+	0	ID=cds-WP_001728014.1;Parent=gene-C9E97_RS09055;Dbxref=GenBank:WP_001728014.1;Name=WP_001728014.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=C9E97_RS09055;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_001728014.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	76176	77153	.	+	.	ID=gene-C9E97_RS09060;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=C9E97_RS09060;old_locus_tag=C9E97_09250
NZ_PYKA01000059.1	Protein Homology	CDS	76176	77153	.	+	0	ID=cds-WP_000118515.1;Parent=gene-C9E97_RS09060;Dbxref=GenBank:WP_000118515.1;Name=WP_000118515.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=C9E97_RS09060;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_000118515.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	77168	77710	.	+	.	ID=gene-C9E97_RS09065;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=C9E97_RS09065;old_locus_tag=C9E97_09255
NZ_PYKA01000059.1	Protein Homology	CDS	77168	77710	.	+	0	ID=cds-WP_000172747.1;Parent=gene-C9E97_RS09065;Dbxref=GenBank:WP_000172747.1;Name=WP_000172747.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=C9E97_RS09065;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_000172747.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	77721	78275	.	+	.	ID=gene-C9E97_RS09070;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=C9E97_RS09070;old_locus_tag=C9E97_09260
NZ_PYKA01000059.1	Protein Homology	CDS	77721	78275	.	+	0	ID=cds-WP_000393522.1;Parent=gene-C9E97_RS09070;Dbxref=GenBank:WP_000393522.1;Name=WP_000393522.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461262.1;locus_tag=C9E97_RS09070;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_000393522.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	78272	78574	.	+	.	ID=gene-C9E97_RS09075;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=C9E97_RS09075;old_locus_tag=C9E97_09265
NZ_PYKA01000059.1	Protein Homology	CDS	78272	78574	.	+	0	ID=cds-WP_000612687.1;Parent=gene-C9E97_RS09075;Dbxref=GenBank:WP_000612687.1;Name=WP_000612687.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=C9E97_RS09075;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_000612687.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	78571	80412	.	+	.	ID=gene-C9E97_RS09080;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=C9E97_RS09080;old_locus_tag=C9E97_09270
NZ_PYKA01000059.1	Protein Homology	CDS	78571	80412	.	+	0	ID=cds-WP_086805608.1;Parent=gene-C9E97_RS09080;Dbxref=GenBank:WP_086805608.1;Name=WP_086805608.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=C9E97_RS09080;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_086805608.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	80489	82018	.	+	.	ID=gene-C9E97_RS09085;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=C9E97_RS09085;old_locus_tag=C9E97_09275
NZ_PYKA01000059.1	Protein Homology	CDS	80489	82018	.	+	0	ID=cds-WP_000926428.1;Parent=gene-C9E97_RS09085;Dbxref=GenBank:WP_000926428.1;Name=WP_000926428.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=C9E97_RS09085;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_000926428.1;transl_table=11
NZ_PYKA01000059.1	RefSeq	gene	82025	83482	.	+	.	ID=gene-C9E97_RS09090;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=C9E97_RS09090;old_locus_tag=C9E97_09280
NZ_PYKA01000059.1	Protein Homology	CDS	82025	83482	.	+	0	ID=cds-WP_000156667.1;Parent=gene-C9E97_RS09090;Dbxref=GenBank:WP_000156667.1;Name=WP_000156667.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=C9E97_RS09090;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_000156667.1;transl_table=11
##sequence-region NZ_PYKA01000113.1 1 80861
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000113.1	RefSeq	region	1	80861	.	+	.	ID=NZ_PYKA01000113.1:1..80861;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000113.1	RefSeq	gene	446	757	.	+	.	ID=gene-C9E97_RS16750;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=C9E97_RS16750;old_locus_tag=C9E97_17110
NZ_PYKA01000113.1	Protein Homology	CDS	446	757	.	+	0	ID=cds-WP_076707646.1;Parent=gene-C9E97_RS16750;Dbxref=GenBank:WP_076707646.1;Name=WP_076707646.1;Ontology_term=GO:0051301;gbkey=CDS;gene=drpB;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000107428.1;locus_tag=C9E97_RS16750;product=cell division protein DrpB;protein_id=WP_076707646.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	837	1532	.	+	.	ID=gene-C9E97_RS16755;Name=C9E97_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16755;old_locus_tag=C9E97_17115
NZ_PYKA01000113.1	Protein Homology	CDS	837	1532	.	+	0	ID=cds-WP_000377042.1;Parent=gene-C9E97_RS16755;Dbxref=GenBank:WP_000377042.1;Name=WP_000377042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460944.1;locus_tag=C9E97_RS16755;product=phosphohydrolase;protein_id=WP_000377042.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	1606	3036	.	+	.	ID=gene-C9E97_RS16760;Name=C9E97_RS16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16760;old_locus_tag=C9E97_17120
NZ_PYKA01000113.1	Protein Homology	CDS	1606	3036	.	+	0	ID=cds-WP_001157315.1;Parent=gene-C9E97_RS16760;Dbxref=GenBank:WP_001157315.1;Name=WP_001157315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460943.1;locus_tag=C9E97_RS16760;product=DNA cytosine methyltransferase;protein_id=WP_001157315.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	3017	3487	.	+	.	ID=gene-C9E97_RS16765;Name=C9E97_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16765;old_locus_tag=C9E97_17125
NZ_PYKA01000113.1	Protein Homology	CDS	3017	3487	.	+	0	ID=cds-WP_000785978.1;Parent=gene-C9E97_RS16765;Dbxref=GenBank:WP_000785978.1;Name=WP_000785978.1;Ontology_term=GO:0006298,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460942.1;locus_tag=C9E97_RS16765;product=very short patch repair endonuclease;protein_id=WP_000785978.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	3476	4396	.	-	.	ID=gene-C9E97_RS16770;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=C9E97_RS16770;old_locus_tag=C9E97_17130
NZ_PYKA01000113.1	Protein Homology	CDS	3476	4396	.	-	0	ID=cds-WP_001212263.1;Parent=gene-C9E97_RS16770;Dbxref=GenBank:WP_001212263.1;Name=WP_001212263.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460941.1;locus_tag=C9E97_RS16770;product=drug/metabolite exporter YedA;protein_id=WP_001212263.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	4566	5483	.	+	.	ID=gene-C9E97_RS16775;Name=C9E97_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16775;old_locus_tag=C9E97_17135
NZ_PYKA01000113.1	Protein Homology	CDS	4566	5483	.	+	0	ID=cds-WP_085920526.1;Parent=gene-C9E97_RS16775;Dbxref=GenBank:WP_085920526.1;Name=WP_085920526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=C9E97_RS16775;product=DUF808 domain-containing protein;protein_id=WP_085920526.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	5560	5745	.	+	.	ID=gene-C9E97_RS16780;Name=C9E97_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16780;old_locus_tag=C9E97_17140
NZ_PYKA01000113.1	Protein Homology	CDS	5560	5745	.	+	0	ID=cds-WP_001521741.1;Parent=gene-C9E97_RS16780;Dbxref=GenBank:WP_001521741.1;Name=WP_001521741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549490.1;locus_tag=C9E97_RS16780;product=YodC family protein;protein_id=WP_001521741.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	5910	7622	.	+	.	ID=gene-C9E97_RS16785;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=C9E97_RS16785;old_locus_tag=C9E97_17145
NZ_PYKA01000113.1	Protein Homology	CDS	5910	7622	.	+	0	ID=cds-WP_135369693.1;Parent=gene-C9E97_RS16785;Dbxref=GenBank:WP_135369693.1;Name=WP_135369693.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460938.1;locus_tag=C9E97_RS16785;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_135369693.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	7601	8416	.	-	.	ID=gene-C9E97_RS16790;Name=C9E97_RS16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16790;old_locus_tag=C9E97_17150
NZ_PYKA01000113.1	Protein Homology	CDS	7601	8416	.	-	0	ID=cds-WP_000948786.1;Parent=gene-C9E97_RS16790;Dbxref=GenBank:WP_000948786.1;Name=WP_000948786.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460937.1;locus_tag=C9E97_RS16790;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WP_000948786.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	8726	8953	.	-	.	ID=gene-C9E97_RS16795;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=C9E97_RS16795;old_locus_tag=C9E97_17155
NZ_PYKA01000113.1	Protein Homology	CDS	8726	8953	.	-	0	ID=cds-WP_000844798.1;Parent=gene-C9E97_RS16795;Dbxref=GenBank:WP_000844798.1;Name=WP_000844798.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460936.1;locus_tag=C9E97_RS16795;product=YodD family peroxide/acid resistance protein;protein_id=WP_000844798.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	9082	9276	.	+	.	ID=gene-C9E97_RS16800;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=C9E97_RS16800;old_locus_tag=C9E97_17160
NZ_PYKA01000113.1	Protein Homology	CDS	9082	9276	.	+	0	ID=cds-WP_000867218.1;Parent=gene-C9E97_RS16800;Dbxref=GenBank:WP_000867218.1;Name=WP_000867218.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736680.1;locus_tag=C9E97_RS16800;product=protein DsrB;protein_id=WP_000867218.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	9315	9938	.	-	.	ID=gene-C9E97_RS16805;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=C9E97_RS16805;old_locus_tag=C9E97_17165
NZ_PYKA01000113.1	Protein Homology	CDS	9315	9938	.	-	0	ID=cds-WP_000103971.1;Parent=gene-C9E97_RS16805;Dbxref=GenBank:WP_000103971.1;Name=WP_000103971.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460935.1;locus_tag=C9E97_RS16805;product=transcriptional regulator RcsA;protein_id=WP_000103971.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	10220	11014	.	-	.	ID=gene-C9E97_RS16810;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=C9E97_RS16810;old_locus_tag=C9E97_17170
NZ_PYKA01000113.1	Protein Homology	CDS	10220	11014	.	-	0	ID=cds-WP_000616953.1;Parent=gene-C9E97_RS16810;Dbxref=GenBank:WP_000616953.1;Name=WP_000616953.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460934.1;locus_tag=C9E97_RS16810;product=flagellar biosynthetic protein FliR;protein_id=WP_000616953.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	11023	11292	.	-	.	ID=gene-C9E97_RS16815;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=C9E97_RS16815;old_locus_tag=C9E97_17175
NZ_PYKA01000113.1	Protein Homology	CDS	11023	11292	.	-	0	ID=cds-WP_000187355.1;Parent=gene-C9E97_RS16815;Dbxref=GenBank:WP_000187355.1;Name=WP_000187355.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=C9E97_RS16815;product=flagellar biosynthesis protein FliQ;protein_id=WP_000187355.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	11302	12039	.	-	.	ID=gene-C9E97_RS16820;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=C9E97_RS16820;old_locus_tag=C9E97_17180
NZ_PYKA01000113.1	Protein Homology	CDS	11302	12039	.	-	0	ID=cds-WP_001253414.1;Parent=gene-C9E97_RS16820;Dbxref=GenBank:WP_001253414.1;Name=WP_001253414.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460932.1;locus_tag=C9E97_RS16820;product=flagellar type III secretion system pore protein FliP;protein_id=WP_001253414.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	12039	12416	.	-	.	ID=gene-C9E97_RS16825;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=C9E97_RS16825;old_locus_tag=C9E97_17185
NZ_PYKA01000113.1	Protein Homology	CDS	12039	12416	.	-	0	ID=cds-WP_000978276.1;Parent=gene-C9E97_RS16825;Dbxref=GenBank:WP_000978276.1;Name=WP_000978276.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460931.3;locus_tag=C9E97_RS16825;product=flagellar biosynthetic protein FliO;protein_id=WP_000978276.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	12416	12829	.	-	.	ID=gene-C9E97_RS16830;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=C9E97_RS16830;old_locus_tag=C9E97_17190
NZ_PYKA01000113.1	Protein Homology	CDS	12416	12829	.	-	0	ID=cds-WP_001282115.1;Parent=gene-C9E97_RS16830;Dbxref=GenBank:WP_001282115.1;Name=WP_001282115.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460930.1;locus_tag=C9E97_RS16830;product=flagellar motor switch protein FliN;protein_id=WP_001282115.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	12826	13830	.	-	.	ID=gene-C9E97_RS16835;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=C9E97_RS16835;old_locus_tag=C9E97_17195
NZ_PYKA01000113.1	Protein Homology	CDS	12826	13830	.	-	0	ID=cds-WP_000502811.1;Parent=gene-C9E97_RS16835;Dbxref=GenBank:WP_000502811.1;Name=WP_000502811.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=C9E97_RS16835;product=flagellar motor switch protein FliM;protein_id=WP_000502811.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	13835	14302	.	-	.	ID=gene-C9E97_RS16840;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=C9E97_RS16840;old_locus_tag=C9E97_17200
NZ_PYKA01000113.1	Protein Homology	CDS	13835	14302	.	-	0	ID=cds-WP_000132169.1;Parent=gene-C9E97_RS16840;Dbxref=GenBank:WP_000132169.1;Name=WP_000132169.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460928.1;locus_tag=C9E97_RS16840;product=flagellar basal body-associated protein FliL;protein_id=WP_000132169.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	14407	15630	.	-	.	ID=gene-C9E97_RS16845;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=C9E97_RS16845;old_locus_tag=C9E97_17205
NZ_PYKA01000113.1	Protein Homology	CDS	14407	15630	.	-	0	ID=cds-WP_000631673.1;Parent=gene-C9E97_RS16845;Dbxref=GenBank:WP_000631673.1;Name=WP_000631673.1;Ontology_term=GO:0044780,GO:0009424;gbkey=CDS;gene=fliK;go_component=bacterial-type flagellum hook|0009424||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460927.1;locus_tag=C9E97_RS16845;product=flagellar hook length control protein FliK;protein_id=WP_000631673.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	15627	16070	.	-	.	ID=gene-C9E97_RS16850;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=C9E97_RS16850;old_locus_tag=C9E97_17210
NZ_PYKA01000113.1	Protein Homology	CDS	15627	16070	.	-	0	ID=cds-WP_000046981.1;Parent=gene-C9E97_RS16850;Dbxref=GenBank:WP_000046981.1;Name=WP_000046981.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460926.1;locus_tag=C9E97_RS16850;product=flagellar export protein FliJ;protein_id=WP_000046981.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	16092	17462	.	-	.	ID=gene-C9E97_RS16855;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=C9E97_RS16855;old_locus_tag=C9E97_17215
NZ_PYKA01000113.1	Protein Homology	CDS	16092	17462	.	-	0	ID=cds-WP_000213257.1;Parent=gene-C9E97_RS16855;Dbxref=GenBank:WP_000213257.1;Name=WP_000213257.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460925.1;locus_tag=C9E97_RS16855;product=flagellar protein export ATPase FliI;protein_id=WP_000213257.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	17462	18169	.	-	.	ID=gene-C9E97_RS16860;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=C9E97_RS16860;old_locus_tag=C9E97_17220
NZ_PYKA01000113.1	Protein Homology	CDS	17462	18169	.	-	0	ID=cds-WP_000064158.1;Parent=gene-C9E97_RS16860;Dbxref=GenBank:WP_000064158.1;Name=WP_000064158.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460924.1;locus_tag=C9E97_RS16860;product=flagellar assembly protein FliH;protein_id=WP_000064158.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	18162	19157	.	-	.	ID=gene-C9E97_RS16865;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=C9E97_RS16865;old_locus_tag=C9E97_17225
NZ_PYKA01000113.1	Protein Homology	CDS	18162	19157	.	-	0	ID=cds-WP_000067735.1;Parent=gene-C9E97_RS16865;Dbxref=GenBank:WP_000067735.1;Name=WP_000067735.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460923.1;locus_tag=C9E97_RS16865;product=flagellar motor switch protein FliG;protein_id=WP_000067735.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	19150	20838	.	-	.	ID=gene-C9E97_RS16870;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=C9E97_RS16870;old_locus_tag=C9E97_17230
NZ_PYKA01000113.1	Protein Homology	CDS	19150	20838	.	-	0	ID=cds-WP_079960389.1;Parent=gene-C9E97_RS16870;Dbxref=GenBank:WP_079960389.1;Name=WP_079960389.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460922.1;locus_tag=C9E97_RS16870;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_079960389.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	21055	21369	.	+	.	ID=gene-C9E97_RS16875;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=C9E97_RS16875;old_locus_tag=C9E97_17235
NZ_PYKA01000113.1	Protein Homology	CDS	21055	21369	.	+	0	ID=cds-WP_000719037.1;Parent=gene-C9E97_RS16875;Dbxref=GenBank:WP_000719037.1;Name=WP_000719037.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460921.1;locus_tag=C9E97_RS16875;product=flagellar hook-basal body complex protein FliE;protein_id=WP_000719037.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	21490	21876	.	-	.	ID=gene-C9E97_RS16880;Name=C9E97_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16880;old_locus_tag=C9E97_17240
NZ_PYKA01000113.1	Protein Homology	CDS	21490	21876	.	-	0	ID=cds-WP_001629111.1;Parent=gene-C9E97_RS16880;Dbxref=GenBank:WP_001629111.1;Name=WP_001629111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448379.1;locus_tag=C9E97_RS16880;product=hypothetical protein;protein_id=WP_001629111.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	22141	22374	.	-	.	ID=gene-C9E97_RS16885;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=C9E97_RS16885;old_locus_tag=C9E97_17245
NZ_PYKA01000113.1	Protein Homology	CDS	22141	22374	.	-	0	ID=cds-WP_000790504.1;Parent=gene-C9E97_RS16885;Dbxref=GenBank:WP_000790504.1;Name=WP_000790504.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=C9E97_RS16885;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_000790504.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	22371	23576	.	-	.	ID=gene-C9E97_RS16890;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=C9E97_RS16890;old_locus_tag=C9E97_17250
NZ_PYKA01000113.1	Protein Homology	CDS	22371	23576	.	-	0	ID=cds-WP_001519382.1;Parent=gene-C9E97_RS16890;Dbxref=GenBank:WP_001519382.1;Name=WP_001519382.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156840.1;locus_tag=C9E97_RS16890;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_001519382.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	23762	24175	.	+	.	ID=gene-C9E97_RS16895;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=C9E97_RS16895;old_locus_tag=C9E97_17255
NZ_PYKA01000113.1	Protein Homology	CDS	23762	24175	.	+	0	ID=cds-WP_000754694.1;Parent=gene-C9E97_RS16895;Dbxref=GenBank:WP_000754694.1;Name=WP_000754694.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754699.1;locus_tag=C9E97_RS16895;product=lipoprotein YedD;protein_id=WP_000754694.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	24215	25699	.	-	.	ID=gene-C9E97_RS16900;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=C9E97_RS16900;old_locus_tag=C9E97_17260
NZ_PYKA01000113.1	Protein Homology	CDS	24215	25699	.	-	0	ID=cds-WP_135369692.1;Parent=gene-C9E97_RS16900;Dbxref=GenBank:WP_135369692.1;Name=WP_135369692.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460916.1;locus_tag=C9E97_RS16900;product=alpha-amylase;protein_id=WP_135369692.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	25771	26139	.	-	.	ID=gene-C9E97_RS16905;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=C9E97_RS16905;old_locus_tag=C9E97_17265
NZ_PYKA01000113.1	Protein Homology	CDS	25771	26139	.	-	0	ID=cds-WP_000204899.1;Parent=gene-C9E97_RS16905;Dbxref=GenBank:WP_000204899.1;Name=WP_000204899.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460915.1;locus_tag=C9E97_RS16905;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_000204899.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	26139	26546	.	-	.	ID=gene-C9E97_RS16910;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=C9E97_RS16910;old_locus_tag=C9E97_17270
NZ_PYKA01000113.1	Protein Homology	CDS	26139	26546	.	-	0	ID=cds-WP_000287764.1;Parent=gene-C9E97_RS16910;Dbxref=GenBank:WP_000287764.1;Name=WP_000287764.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460914.1;locus_tag=C9E97_RS16910;product=flagellar export chaperone FliS;protein_id=WP_000287764.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	26561	27964	.	-	.	ID=gene-C9E97_RS16915;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=C9E97_RS16915;old_locus_tag=C9E97_17275
NZ_PYKA01000113.1	Protein Homology	CDS	26561	27964	.	-	0	ID=cds-WP_031605229.1;Parent=gene-C9E97_RS16915;Dbxref=GenBank:WP_031605229.1;Name=WP_031605229.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460913.1;locus_tag=C9E97_RS16915;product=flagellar filament capping protein FliD;protein_id=WP_031605229.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	27981	28202	.	+	.	ID=gene-C9E97_RS23515;Name=C9E97_RS23515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23515;old_locus_tag=C9E97_17280
NZ_PYKA01000113.1	GeneMarkS-2+	CDS	27981	28202	.	+	0	ID=cds-WP_023234688.1;Parent=gene-C9E97_RS23515;Dbxref=GenBank:WP_023234688.1;Name=WP_023234688.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E97_RS23515;product=hypothetical protein;protein_id=WP_023234688.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	28220	29485	.	+	.	ID=gene-C9E97_RS16920;Name=C9E97_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16920;old_locus_tag=C9E97_17285
NZ_PYKA01000113.1	Protein Homology	CDS	28220	29485	.	+	0	ID=cds-WP_135369691.1;Parent=gene-C9E97_RS16920;Dbxref=GenBank:WP_135369691.1;Name=WP_135369691.1;Ontology_term=GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002953542.1;locus_tag=C9E97_RS16920;product=FliC/FljB family flagellin;protein_id=WP_135369691.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	29564	30769	.	+	.	ID=gene-C9E97_RS16925;Name=fliB;gbkey=Gene;gene=fliB;gene_biotype=protein_coding;locus_tag=C9E97_RS16925;old_locus_tag=C9E97_17290
NZ_PYKA01000113.1	Protein Homology	CDS	29564	30769	.	+	0	ID=cds-WP_135369690.1;Parent=gene-C9E97_RS16925;Dbxref=GenBank:WP_135369690.1;Name=WP_135369690.1;gbkey=CDS;gene=fliB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460911.1;locus_tag=C9E97_RS16925;product=flagellin lysine-N-methylase;protein_id=WP_135369690.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	30966	31685	.	+	.	ID=gene-C9E97_RS16930;Name=C9E97_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16930;old_locus_tag=C9E97_17295
NZ_PYKA01000113.1	Protein Homology	CDS	30966	31685	.	+	0	ID=cds-WP_001087453.1;Parent=gene-C9E97_RS16930;Dbxref=GenBank:WP_001087453.1;Name=WP_001087453.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460909.1;locus_tag=C9E97_RS16930;product=RNA polymerase sigma factor FliA;protein_id=WP_001087453.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	31744	32295	.	+	.	ID=gene-C9E97_RS16935;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=C9E97_RS16935;old_locus_tag=C9E97_17300
NZ_PYKA01000113.1	Protein Homology	CDS	31744	32295	.	+	0	ID=cds-WP_000218080.1;Parent=gene-C9E97_RS16935;Dbxref=GenBank:WP_000218080.1;Name=WP_000218080.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460908.1;locus_tag=C9E97_RS16935;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_000218080.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	32442	33242	.	+	.	ID=gene-C9E97_RS16940;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=C9E97_RS16940;old_locus_tag=C9E97_17305
NZ_PYKA01000113.1	Protein Homology	CDS	32442	33242	.	+	0	ID=cds-WP_000761628.1;Parent=gene-C9E97_RS16940;Dbxref=GenBank:WP_000761628.1;Name=WP_000761628.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460907.1;locus_tag=C9E97_RS16940;product=cystine ABC transporter substrate-binding protein;protein_id=WP_000761628.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	33396	34382	.	+	.	ID=gene-C9E97_RS16945;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=C9E97_RS16945;old_locus_tag=C9E97_17310
NZ_PYKA01000113.1	Protein Homology	CDS	33396	34382	.	+	0	ID=cds-WP_001128188.1;Parent=gene-C9E97_RS16945;Dbxref=GenBank:WP_001128188.1;Name=WP_001128188.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460906.1;locus_tag=C9E97_RS16945;product=D-cysteine desulfhydrase;protein_id=WP_001128188.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	34403	35071	.	+	.	ID=gene-C9E97_RS16950;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=C9E97_RS16950;old_locus_tag=C9E97_17315
NZ_PYKA01000113.1	Protein Homology	CDS	34403	35071	.	+	0	ID=cds-WP_001158238.1;Parent=gene-C9E97_RS16950;Dbxref=GenBank:WP_001158238.1;Name=WP_001158238.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460905.1;locus_tag=C9E97_RS16950;product=cystine ABC transporter permease;protein_id=WP_001158238.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	35068	35820	.	+	.	ID=gene-C9E97_RS16955;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=C9E97_RS16955;old_locus_tag=C9E97_17320
NZ_PYKA01000113.1	Protein Homology	CDS	35068	35820	.	+	0	ID=cds-WP_001273024.1;Parent=gene-C9E97_RS16955;Dbxref=GenBank:WP_001273024.1;Name=WP_001273024.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460904.1;locus_tag=C9E97_RS16955;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=WP_001273024.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	36053	36775	.	+	.	ID=gene-C9E97_RS16960;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=C9E97_RS16960;old_locus_tag=C9E97_17325
NZ_PYKA01000113.1	Protein Homology	CDS	36053	36775	.	+	0	ID=cds-WP_001157172.1;Parent=gene-C9E97_RS16960;Dbxref=GenBank:WP_001157172.1;Name=WP_001157172.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460903.1;locus_tag=C9E97_RS16960;product=transcriptional regulator SdiA;protein_id=WP_001157172.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	36842	37066	.	-	.	ID=gene-C9E97_RS16965;Name=C9E97_RS16965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16965;old_locus_tag=C9E97_17330
NZ_PYKA01000113.1	Protein Homology	CDS	36842	37066	.	-	0	ID=cds-WP_000106483.1;Parent=gene-C9E97_RS16965;Dbxref=GenBank:WP_000106483.1;Name=WP_000106483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460902.1;locus_tag=C9E97_RS16965;product=DUF2594 family protein;protein_id=WP_000106483.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	37063	37218	.	-	.	ID=gene-C9E97_RS16970;Name=C9E97_RS16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16970;old_locus_tag=C9E97_17335
NZ_PYKA01000113.1	Protein Homology	CDS	37063	37218	.	-	0	ID=cds-WP_000546186.1;Parent=gene-C9E97_RS16970;Dbxref=GenBank:WP_000546186.1;Name=WP_000546186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448360.1;locus_tag=C9E97_RS16970;product=hypothetical protein;protein_id=WP_000546186.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	37530	38186	.	+	.	ID=gene-C9E97_RS16975;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=C9E97_RS16975;old_locus_tag=C9E97_17340
NZ_PYKA01000113.1	Protein Homology	CDS	37530	38186	.	+	0	ID=cds-WP_000611323.1;Parent=gene-C9E97_RS16975;Dbxref=GenBank:WP_000611323.1;Name=WP_000611323.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460900.1;locus_tag=C9E97_RS16975;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_000611323.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	38183	40015	.	+	.	ID=gene-C9E97_RS16980;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=C9E97_RS16980;old_locus_tag=C9E97_17345
NZ_PYKA01000113.1	Protein Homology	CDS	38183	40015	.	+	0	ID=cds-WP_001289468.1;Parent=gene-C9E97_RS16980;Dbxref=GenBank:WP_001289468.1;Name=WP_001289468.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460899.1;locus_tag=C9E97_RS16980;product=excinuclease ABC subunit UvrC;protein_id=WP_001289468.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	40072	40620	.	+	.	ID=gene-C9E97_RS16985;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=C9E97_RS16985;old_locus_tag=C9E97_17350
NZ_PYKA01000113.1	Protein Homology	CDS	40072	40620	.	+	0	ID=cds-WP_001160192.1;Parent=gene-C9E97_RS16985;Dbxref=GenBank:WP_001160192.1;Name=WP_001160192.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460898.1;locus_tag=C9E97_RS16985;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_001160192.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	40772	40847	.	+	.	ID=gene-C9E97_RS16990;Name=C9E97_RS16990;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS16990;old_locus_tag=C9E97_17355
NZ_PYKA01000113.1	tRNAscan-SE	tRNA	40772	40847	.	+	.	ID=rna-C9E97_RS16990;Parent=gene-C9E97_RS16990;anticodon=(pos:40805..40807);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS16990;product=tRNA-Gly
NZ_PYKA01000113.1	tRNAscan-SE	exon	40772	40847	.	+	.	ID=exon-C9E97_RS16990-1;Parent=rna-C9E97_RS16990;anticodon=(pos:40805..40807);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS16990;product=tRNA-Gly
NZ_PYKA01000113.1	RefSeq	gene	40899	40972	.	+	.	ID=gene-C9E97_RS16995;Name=C9E97_RS16995;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS16995;old_locus_tag=C9E97_17360
NZ_PYKA01000113.1	tRNAscan-SE	tRNA	40899	40972	.	+	.	ID=rna-C9E97_RS16995;Parent=gene-C9E97_RS16995;anticodon=(pos:40931..40933);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS16995;product=tRNA-Cys
NZ_PYKA01000113.1	tRNAscan-SE	exon	40899	40972	.	+	.	ID=exon-C9E97_RS16995-1;Parent=rna-C9E97_RS16995;anticodon=(pos:40931..40933);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS16995;product=tRNA-Cys
NZ_PYKA01000113.1	RefSeq	gene	40984	41070	.	+	.	ID=gene-C9E97_RS17000;Name=C9E97_RS17000;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS17000;old_locus_tag=C9E97_17365
NZ_PYKA01000113.1	tRNAscan-SE	tRNA	40984	41070	.	+	.	ID=rna-C9E97_RS17000;Parent=gene-C9E97_RS17000;anticodon=(pos:41018..41020);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS17000;product=tRNA-Leu
NZ_PYKA01000113.1	tRNAscan-SE	exon	40984	41070	.	+	.	ID=exon-C9E97_RS17000-1;Parent=rna-C9E97_RS17000;anticodon=(pos:41018..41020);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS17000;product=tRNA-Leu
NZ_PYKA01000113.1	RefSeq	gene	41321	41653	.	+	.	ID=gene-C9E97_RS17005;Name=C9E97_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17005;old_locus_tag=C9E97_17370
NZ_PYKA01000113.1	Protein Homology	CDS	41321	41653	.	+	0	ID=cds-WP_023139758.1;Parent=gene-C9E97_RS17005;Dbxref=GenBank:WP_023139758.1;Name=WP_023139758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460897.1;locus_tag=C9E97_RS17005;product=hypothetical protein;protein_id=WP_023139758.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	41867	43306	.	+	.	ID=gene-C9E97_RS17010;Name=C9E97_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17010;old_locus_tag=C9E97_17375
NZ_PYKA01000113.1	Protein Homology	CDS	41867	43306	.	+	0	ID=cds-WP_135369689.1;Parent=gene-C9E97_RS17010;Dbxref=GenBank:WP_135369689.1;Name=WP_135369689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460896.1;locus_tag=C9E97_RS17010;product=SH3 domain-containing C40 family peptidase;protein_id=WP_135369689.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	43519	43845	.	+	.	ID=gene-C9E97_RS17015;Name=C9E97_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17015;old_locus_tag=C9E97_17380
NZ_PYKA01000113.1	Protein Homology	CDS	43519	43845	.	+	0	ID=cds-WP_000240837.1;Parent=gene-C9E97_RS17015;Dbxref=GenBank:WP_000240837.1;Name=WP_000240837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460895.1;locus_tag=C9E97_RS17015;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000240837.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	44084	44749	.	+	.	ID=gene-C9E97_RS17020;Name=C9E97_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17020;old_locus_tag=C9E97_17385
NZ_PYKA01000113.1	Protein Homology	CDS	44084	44749	.	+	0	ID=cds-WP_000781521.1;Parent=gene-C9E97_RS17020;Dbxref=GenBank:WP_000781521.1;Name=WP_000781521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460894.1;locus_tag=C9E97_RS17020;product=YecA family protein;protein_id=WP_000781521.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	44824	46035	.	-	.	ID=gene-C9E97_RS17025;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=C9E97_RS17025;old_locus_tag=C9E97_17390
NZ_PYKA01000113.1	Protein Homology	CDS	44824	46035	.	-	0	ID=cds-WP_023204702.1;Parent=gene-C9E97_RS17025;Dbxref=GenBank:WP_023204702.1;Name=WP_023204702.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460893.1;locus_tag=C9E97_RS17025;product=tyrosine transporter TyrP;protein_id=WP_023204702.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	46262	46501	.	+	.	ID=gene-C9E97_RS17030;Name=C9E97_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17030;old_locus_tag=C9E97_17395
NZ_PYKA01000113.1	Protein Homology	CDS	46262	46501	.	+	0	ID=cds-WP_000377238.1;Parent=gene-C9E97_RS17030;Dbxref=GenBank:WP_000377238.1;Name=WP_000377238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460892.1;locus_tag=C9E97_RS17030;product=YecH family metal-binding protein;protein_id=WP_000377238.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	46547	47044	.	-	.	ID=gene-C9E97_RS17035;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=C9E97_RS17035;old_locus_tag=C9E97_17400
NZ_PYKA01000113.1	Protein Homology	CDS	46547	47044	.	-	0	ID=cds-WP_000920611.1;Parent=gene-C9E97_RS17035;Dbxref=GenBank:WP_000920611.1;Name=WP_000920611.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920608.1;locus_tag=C9E97_RS17035;product=non-heme ferritin;protein_id=WP_000920611.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	47284	47619	.	-	.	ID=gene-C9E97_RS17040;Name=C9E97_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17040;old_locus_tag=C9E97_17405
NZ_PYKA01000113.1	Protein Homology	CDS	47284	47619	.	-	0	ID=cds-WP_023258287.1;Parent=gene-C9E97_RS17040;Dbxref=GenBank:WP_023258287.1;Name=WP_023258287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460890.1;locus_tag=C9E97_RS17040;product=YecR-like lipofamily protein;protein_id=WP_023258287.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	47875	48513	.	+	.	ID=gene-C9E97_RS17045;Name=C9E97_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17045;old_locus_tag=C9E97_17410
NZ_PYKA01000113.1	Protein Homology	CDS	47875	48513	.	+	0	ID=cds-WP_000684804.1;Parent=gene-C9E97_RS17045;Dbxref=GenBank:WP_000684804.1;Name=WP_000684804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460889.1;locus_tag=C9E97_RS17045;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_000684804.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	48692	49195	.	-	.	ID=gene-C9E97_RS17050;Name=C9E97_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17050;old_locus_tag=C9E97_17415
NZ_PYKA01000113.1	Protein Homology	CDS	48692	49195	.	-	0	ID=cds-WP_000741707.1;Parent=gene-C9E97_RS17050;Dbxref=GenBank:WP_000741707.1;Name=WP_000741707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460888.1;locus_tag=C9E97_RS17050;product=non-heme ferritin-like protein;protein_id=WP_000741707.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	49746	50303	.	+	.	ID=gene-C9E97_RS17055;Name=C9E97_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17055;old_locus_tag=C9E97_17420
NZ_PYKA01000113.1	Protein Homology	CDS	49746	50303	.	+	0	ID=cds-WP_000754796.1;Parent=gene-C9E97_RS17055;Dbxref=GenBank:WP_000754796.1;Name=WP_000754796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460887.1;locus_tag=C9E97_RS17055;product=DJ-1/PfpI family protein;protein_id=WP_000754796.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	pseudogene	50415	50595	.	+	.	ID=gene-C9E97_RS17060;Name=araH;gbkey=Gene;gene=araH;gene_biotype=pseudogene;locus_tag=C9E97_RS17060;old_locus_tag=C9E97_17425;partial=true;pseudo=true;start_range=.,50415
NZ_PYKA01000113.1	Protein Homology	CDS	50415	50595	.	+	0	ID=cds-C9E97_RS17060;Parent=gene-C9E97_RS17060;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707790.1;locus_tag=C9E97_RS17060;partial=true;product=L-arabinose ABC transporter permease AraH;pseudo=true;start_range=.,50415;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	50818	51621	.	+	.	ID=gene-C9E97_RS17065;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=C9E97_RS17065;old_locus_tag=C9E97_17430
NZ_PYKA01000113.1	Protein Homology	CDS	50818	51621	.	+	0	ID=cds-WP_000840114.1;Parent=gene-C9E97_RS17065;Dbxref=GenBank:WP_000840114.1;Name=WP_000840114.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460886.1;locus_tag=C9E97_RS17065;product=trehalose-phosphatase;protein_id=WP_000840114.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	51596	53017	.	+	.	ID=gene-C9E97_RS17070;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=C9E97_RS17070;old_locus_tag=C9E97_17435
NZ_PYKA01000113.1	Protein Homology	CDS	51596	53017	.	+	0	ID=cds-WP_000089042.1;Parent=gene-C9E97_RS17070;Dbxref=GenBank:WP_000089042.1;Name=WP_000089042.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460885.1;locus_tag=C9E97_RS17070;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_000089042.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	53035	53463	.	-	.	ID=gene-C9E97_RS17075;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=C9E97_RS17075;old_locus_tag=C9E97_17440
NZ_PYKA01000113.1	Protein Homology	CDS	53035	53463	.	-	0	ID=cds-WP_000122606.1;Parent=gene-C9E97_RS17075;Dbxref=GenBank:WP_000122606.1;Name=WP_000122606.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460884.1;locus_tag=C9E97_RS17075;product=universal stress protein UspC;protein_id=WP_000122606.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	53460	53576	.	-	.	ID=gene-C9E97_RS17080;Name=C9E97_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17080;old_locus_tag=C9E97_17445
NZ_PYKA01000113.1	Protein Homology	CDS	53460	53576	.	-	0	ID=cds-WP_031609601.1;Parent=gene-C9E97_RS17080;Dbxref=GenBank:WP_031609601.1;Name=WP_031609601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448342.1;locus_tag=C9E97_RS17080;product=hypothetical protein;protein_id=WP_031609601.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	54259	54600	.	+	.	ID=gene-C9E97_RS17085;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=C9E97_RS17085;old_locus_tag=C9E97_17450
NZ_PYKA01000113.1	Protein Homology	CDS	54259	54600	.	+	0	ID=cds-WP_001518146.1;Parent=gene-C9E97_RS17085;Dbxref=GenBank:WP_001518146.1;Name=WP_001518146.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310629.2;locus_tag=C9E97_RS17085;product=flagellar transcriptional regulator FlhD;protein_id=WP_001518146.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	54597	55181	.	+	.	ID=gene-C9E97_RS17090;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=C9E97_RS17090;old_locus_tag=C9E97_17455
NZ_PYKA01000113.1	Protein Homology	CDS	54597	55181	.	+	0	ID=cds-WP_000605987.1;Parent=gene-C9E97_RS17090;Dbxref=GenBank:WP_000605987.1;Name=WP_000605987.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460881.3;locus_tag=C9E97_RS17090;product=flagellar transcriptional regulator FlhC;protein_id=WP_000605987.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	55306	56193	.	+	.	ID=gene-C9E97_RS17095;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=C9E97_RS17095;old_locus_tag=C9E97_17460
NZ_PYKA01000113.1	Protein Homology	CDS	55306	56193	.	+	0	ID=cds-WP_000906312.1;Parent=gene-C9E97_RS17095;Dbxref=GenBank:WP_000906312.1;Name=WP_000906312.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460880.1;locus_tag=C9E97_RS17095;product=flagellar motor stator protein MotA;protein_id=WP_000906312.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	56190	57119	.	+	.	ID=gene-C9E97_RS17100;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=C9E97_RS17100;old_locus_tag=C9E97_17465
NZ_PYKA01000113.1	Protein Homology	CDS	56190	57119	.	+	0	ID=cds-WP_000795653.1;Parent=gene-C9E97_RS17100;Dbxref=GenBank:WP_000795653.1;Name=WP_000795653.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460879.1;locus_tag=C9E97_RS17100;product=flagellar motor protein MotB;protein_id=WP_000795653.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	57124	59139	.	+	.	ID=gene-C9E97_RS17105;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=C9E97_RS17105;old_locus_tag=C9E97_17470
NZ_PYKA01000113.1	Protein Homology	CDS	57124	59139	.	+	0	ID=cds-WP_135419979.1;Parent=gene-C9E97_RS17105;Dbxref=GenBank:WP_135419979.1;Name=WP_135419979.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460878.1;locus_tag=C9E97_RS17105;product=chemotaxis protein CheA;protein_id=WP_135419979.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	59160	59663	.	+	.	ID=gene-C9E97_RS17110;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=C9E97_RS17110;old_locus_tag=C9E97_17475
NZ_PYKA01000113.1	Protein Homology	CDS	59160	59663	.	+	0	ID=cds-WP_000147295.1;Parent=gene-C9E97_RS17110;Dbxref=GenBank:WP_000147295.1;Name=WP_000147295.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460877.1;locus_tag=C9E97_RS17110;product=chemotaxis protein CheW;protein_id=WP_000147295.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	59900	61561	.	+	.	ID=gene-C9E97_RS17115;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=C9E97_RS17115;old_locus_tag=C9E97_17480
NZ_PYKA01000113.1	Protein Homology	CDS	59900	61561	.	+	0	ID=cds-WP_000483277.1;Parent=gene-C9E97_RS17115;Dbxref=GenBank:WP_000483277.1;Name=WP_000483277.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460876.1;locus_tag=C9E97_RS17115;product=methyl-accepting chemotaxis protein II;protein_id=WP_000483277.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	61722	62588	.	+	.	ID=gene-C9E97_RS17120;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=C9E97_RS17120;old_locus_tag=C9E97_17485
NZ_PYKA01000113.1	Protein Homology	CDS	61722	62588	.	+	0	ID=cds-WP_000204362.1;Parent=gene-C9E97_RS17120;Dbxref=GenBank:WP_000204362.1;Name=WP_000204362.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460875.1;locus_tag=C9E97_RS17120;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_000204362.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	62585	63634	.	+	.	ID=gene-C9E97_RS17125;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=C9E97_RS17125;old_locus_tag=C9E97_17490
NZ_PYKA01000113.1	Protein Homology	CDS	62585	63634	.	+	0	ID=cds-WP_000036392.1;Parent=gene-C9E97_RS17125;Dbxref=GenBank:WP_000036392.1;Name=WP_000036392.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=C9E97_RS17125;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WP_000036392.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	63652	64041	.	+	.	ID=gene-C9E97_RS17130;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=C9E97_RS17130;old_locus_tag=C9E97_17495
NZ_PYKA01000113.1	Protein Homology	CDS	63652	64041	.	+	0	ID=cds-WP_000763861.1;Parent=gene-C9E97_RS17130;Dbxref=GenBank:WP_000763861.1;Name=WP_000763861.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=C9E97_RS17130;product=chemotaxis response regulator CheY;protein_id=WP_000763861.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	64052	64696	.	+	.	ID=gene-C9E97_RS17135;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=C9E97_RS17135;old_locus_tag=C9E97_17500
NZ_PYKA01000113.1	Protein Homology	CDS	64052	64696	.	+	0	ID=cds-WP_000983586.1;Parent=gene-C9E97_RS17135;Dbxref=GenBank:WP_000983586.1;Name=WP_000983586.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460872.1;locus_tag=C9E97_RS17135;product=protein phosphatase CheZ;protein_id=WP_000983586.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	64890	66041	.	+	.	ID=gene-C9E97_RS17140;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=C9E97_RS17140;old_locus_tag=C9E97_17505
NZ_PYKA01000113.1	Protein Homology	CDS	64890	66041	.	+	0	ID=cds-WP_000797081.1;Parent=gene-C9E97_RS17140;Dbxref=GenBank:WP_000797081.1;Name=WP_000797081.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460871.1;locus_tag=C9E97_RS17140;product=flagellar biosynthesis protein FlhB;protein_id=WP_000797081.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	66034	68112	.	+	.	ID=gene-C9E97_RS17145;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=C9E97_RS17145;old_locus_tag=C9E97_17510
NZ_PYKA01000113.1	Protein Homology	CDS	66034	68112	.	+	0	ID=cds-WP_000002392.1;Parent=gene-C9E97_RS17145;Dbxref=GenBank:WP_000002392.1;Name=WP_000002392.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460870.1;locus_tag=C9E97_RS17145;product=flagellar biosynthesis protein FlhA;protein_id=WP_000002392.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	68112	68504	.	+	.	ID=gene-C9E97_RS17150;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=C9E97_RS17150;old_locus_tag=C9E97_17515
NZ_PYKA01000113.1	Protein Homology	CDS	68112	68504	.	+	0	ID=cds-WP_001233620.1;Parent=gene-C9E97_RS17150;Dbxref=GenBank:WP_001233620.1;Name=WP_001233620.1;Ontology_term=GO:0044781;gbkey=CDS;gene=flhE;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460869.1;locus_tag=C9E97_RS17150;product=flagellar protein FlhE;protein_id=WP_001233620.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	68741	69880	.	+	.	ID=gene-C9E97_RS17155;Name=C9E97_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17155;old_locus_tag=C9E97_17520
NZ_PYKA01000113.1	Protein Homology	CDS	68741	69880	.	+	0	ID=cds-WP_000989908.1;Parent=gene-C9E97_RS17155;Dbxref=GenBank:WP_000989908.1;Name=WP_000989908.1;Ontology_term=GO:0005975,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=C9E97_RS17155;product=glycoside hydrolase family 88/105 protein;protein_id=WP_000989908.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	69934	71805	.	-	.	ID=gene-C9E97_RS17160;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=C9E97_RS17160;old_locus_tag=C9E97_17525
NZ_PYKA01000113.1	Protein Homology	CDS	69934	71805	.	-	0	ID=cds-WP_050067675.1;Parent=gene-C9E97_RS17160;Dbxref=GenBank:WP_050067675.1;Name=WP_050067675.1;Ontology_term=GO:0009252,GO:0003824,GO:0008658,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=catalytic activity|0003824||IEA,penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460867.1;locus_tag=C9E97_RS17160;product=penicillin-binding protein 2;protein_id=WP_050067675.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	71994	73727	.	-	.	ID=gene-C9E97_RS17165;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=C9E97_RS17165;old_locus_tag=C9E97_17530
NZ_PYKA01000113.1	Protein Homology	CDS	71994	73727	.	-	0	ID=cds-WP_001025363.1;Parent=gene-C9E97_RS17165;Dbxref=GenBank:WP_001025363.1;Name=WP_001025363.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=C9E97_RS17165;product=arginine--tRNA ligase;protein_id=WP_001025363.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	73964	74533	.	+	.	ID=gene-C9E97_RS17170;Name=C9E97_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17170;old_locus_tag=C9E97_17535
NZ_PYKA01000113.1	Protein Homology	CDS	73964	74533	.	+	0	ID=cds-WP_000024796.1;Parent=gene-C9E97_RS17170;Dbxref=GenBank:WP_000024796.1;Name=WP_000024796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460865.1;locus_tag=C9E97_RS17170;product=VOC family protein;protein_id=WP_000024796.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	74553	75299	.	+	.	ID=gene-C9E97_RS17175;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=C9E97_RS17175;old_locus_tag=C9E97_17540
NZ_PYKA01000113.1	Protein Homology	CDS	74553	75299	.	+	0	ID=cds-WP_001185780.1;Parent=gene-C9E97_RS17175;Dbxref=GenBank:WP_001185780.1;Name=WP_001185780.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460864.1;locus_tag=C9E97_RS17175;product=copper homeostasis protein CutC;protein_id=WP_001185780.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	75535	76506	.	-	.	ID=gene-C9E97_RS17180;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=C9E97_RS17180;old_locus_tag=C9E97_17545
NZ_PYKA01000113.1	Protein Homology	CDS	75535	76506	.	-	0	ID=cds-WP_031605237.1;Parent=gene-C9E97_RS17180;Dbxref=GenBank:WP_031605237.1;Name=WP_031605237.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460863.1;locus_tag=C9E97_RS17180;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_031605237.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	76503	77246	.	-	.	ID=gene-C9E97_RS17185;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=C9E97_RS17185;old_locus_tag=C9E97_17550
NZ_PYKA01000113.1	Protein Homology	CDS	76503	77246	.	-	0	ID=cds-WP_000019607.1;Parent=gene-C9E97_RS17185;Dbxref=GenBank:WP_000019607.1;Name=WP_000019607.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460862.1;locus_tag=C9E97_RS17185;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_000019607.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	77287	77682	.	-	.	ID=gene-C9E97_RS17190;Name=C9E97_RS17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17190;old_locus_tag=C9E97_17555
NZ_PYKA01000113.1	Protein Homology	CDS	77287	77682	.	-	0	ID=cds-WP_000252975.1;Parent=gene-C9E97_RS17190;Dbxref=GenBank:WP_000252975.1;Name=WP_000252975.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460861.1;locus_tag=C9E97_RS17190;product=MAPEG family protein;protein_id=WP_000252975.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	pseudogene	77735	77830	.	-	.	ID=gene-C9E97_RS23865;Name=C9E97_RS23865;end_range=77830,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23865;partial=true;pseudo=true
NZ_PYKA01000113.1	Protein Homology	CDS	77735	77830	.	-	0	ID=cds-C9E97_RS23865;Parent=gene-C9E97_RS23865;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=77830,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460860.1;locus_tag=C9E97_RS23865;partial=true;product=DUF72 domain-containing protein;pseudo=true;transl_table=11
NZ_PYKA01000113.1	RefSeq	pseudogene	77793	79870	.	+	.	ID=gene-C9E97_RS17195;Name=C9E97_RS17195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS17195;old_locus_tag=C9E97_17560;pseudo=true
NZ_PYKA01000113.1	Protein Homology	CDS	77793	79870	.	+	0	ID=cds-C9E97_RS17195;Parent=gene-C9E97_RS17195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460024.1;locus_tag=C9E97_RS17195;product=phage tail protein;pseudo=true;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	79870	80454	.	+	.	ID=gene-C9E97_RS17200;Name=C9E97_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17200;old_locus_tag=C9E97_17565
NZ_PYKA01000113.1	Protein Homology	CDS	79870	80454	.	+	0	ID=cds-WP_135369337.1;Parent=gene-C9E97_RS17200;Dbxref=GenBank:WP_135369337.1;Name=WP_135369337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461522.1;locus_tag=C9E97_RS17200;product=tail fiber assembly protein;protein_id=WP_135369337.1;transl_table=11
NZ_PYKA01000113.1	RefSeq	gene	80551	80751	.	-	.	ID=gene-C9E97_RS17205;Name=pagK;gbkey=Gene;gene=pagK;gene_biotype=protein_coding;gene_synonym=pagK1;locus_tag=C9E97_RS17205;old_locus_tag=C9E97_17570
NZ_PYKA01000113.1	Protein Homology	CDS	80551	80751	.	-	0	ID=cds-WP_033578003.1;Parent=gene-C9E97_RS17205;Dbxref=GenBank:WP_033578003.1;Name=WP_033578003.1;gbkey=CDS;gene=pagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460822.1;locus_tag=C9E97_RS17205;product=vesicle-borne virulence factor PagK;protein_id=WP_033578003.1;transl_table=11
##sequence-region NZ_PYKA01000132.1 1 75638
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000132.1	RefSeq	region	1	75638	.	+	.	ID=NZ_PYKA01000132.1:1..75638;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000132.1	RefSeq	gene	98	2236	.	-	.	ID=gene-C9E97_RS21190;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=C9E97_RS21190;old_locus_tag=C9E97_21690
NZ_PYKA01000132.1	Protein Homology	CDS	98	2236	.	-	0	ID=cds-WP_000187818.1;Parent=gene-C9E97_RS21190;Dbxref=GenBank:WP_000187818.1;Name=WP_000187818.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463313.1;locus_tag=C9E97_RS21190;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_000187818.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	2645	4297	.	-	.	ID=gene-C9E97_RS21195;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=C9E97_RS21195;old_locus_tag=C9E97_21695
NZ_PYKA01000132.1	Protein Homology	CDS	2645	4297	.	-	0	ID=cds-WP_135369780.1;Parent=gene-C9E97_RS21195;Dbxref=GenBank:WP_135369780.1;Name=WP_135369780.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463314.1;locus_tag=C9E97_RS21195;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_135369780.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	4347	5765	.	-	.	ID=gene-C9E97_RS21200;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=C9E97_RS21200;old_locus_tag=C9E97_21700
NZ_PYKA01000132.1	Protein Homology	CDS	4347	5765	.	-	0	ID=cds-WP_000048817.1;Parent=gene-C9E97_RS21200;Dbxref=GenBank:WP_000048817.1;Name=WP_000048817.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224799.1;locus_tag=C9E97_RS21200;product=PTS trehalose transporter subunit IIBC;protein_id=WP_000048817.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	5903	6850	.	-	.	ID=gene-C9E97_RS21205;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=C9E97_RS21205;old_locus_tag=C9E97_21705
NZ_PYKA01000132.1	Protein Homology	CDS	5903	6850	.	-	0	ID=cds-WP_001181297.1;Parent=gene-C9E97_RS21205;Dbxref=GenBank:WP_001181297.1;Name=WP_001181297.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463315.1;locus_tag=C9E97_RS21205;product=trehalose operon repressor TreR;protein_id=WP_001181297.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	7040	7093	.	+	.	ID=gene-C9E97_RS24135;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=C9E97_RS24135
NZ_PYKA01000132.1	Protein Homology	CDS	7040	7093	.	+	0	ID=cds-WP_099374030.1;Parent=gene-C9E97_RS24135;Dbxref=GenBank:WP_099374030.1;Name=WP_099374030.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: protein motif:HMM:NF028369.6;locus_tag=C9E97_RS24135;product=mgtA regulatory leader peptide MgtL;protein_id=WP_099374030.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	7234	9942	.	+	.	ID=gene-C9E97_RS21215;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=C9E97_RS21215;old_locus_tag=C9E97_21710
NZ_PYKA01000132.1	Protein Homology	CDS	7234	9942	.	+	0	ID=cds-WP_135369781.1;Parent=gene-C9E97_RS21215;Dbxref=GenBank:WP_135369781.1;Name=WP_135369781.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=C9E97_RS21215;product=magnesium-translocating P-type ATPase;protein_id=WP_135369781.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	10031	10417	.	-	.	ID=gene-C9E97_RS21220;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=C9E97_RS21220;old_locus_tag=C9E97_21715
NZ_PYKA01000132.1	Protein Homology	CDS	10031	10417	.	-	0	ID=cds-WP_000047544.1;Parent=gene-C9E97_RS21220;Dbxref=GenBank:WP_000047544.1;Name=WP_000047544.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463318.1;locus_tag=C9E97_RS21220;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_000047544.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	10494	10955	.	-	.	ID=gene-C9E97_RS21225;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=C9E97_RS21225;old_locus_tag=C9E97_21720
NZ_PYKA01000132.1	Protein Homology	CDS	10494	10955	.	-	0	ID=cds-WP_000148570.1;Parent=gene-C9E97_RS21225;Dbxref=GenBank:WP_000148570.1;Name=WP_000148570.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=C9E97_RS21225;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_000148570.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	10968	11903	.	-	.	ID=gene-C9E97_RS21230;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=C9E97_RS21230;old_locus_tag=C9E97_21725
NZ_PYKA01000132.1	Protein Homology	CDS	10968	11903	.	-	0	ID=cds-WP_000013055.1;Parent=gene-C9E97_RS21230;Dbxref=GenBank:WP_000013055.1;Name=WP_000013055.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463320.1;locus_tag=C9E97_RS21230;product=aspartate carbamoyltransferase;protein_id=WP_000013055.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	11939	12040	.	-	.	ID=gene-C9E97_RS21235;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=C9E97_RS21235;old_locus_tag=C9E97_21730
NZ_PYKA01000132.1	Protein Homology	CDS	11939	12040	.	-	0	ID=cds-WP_000249504.1;Parent=gene-C9E97_RS21235;Dbxref=GenBank:WP_000249504.1;Name=WP_000249504.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=C9E97_RS21235;product=pyr operon leader peptide;protein_id=WP_000249504.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	12020	12160	.	+	.	ID=gene-C9E97_RS21240;Name=C9E97_RS21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21240;old_locus_tag=C9E97_21735
NZ_PYKA01000132.1	Protein Homology	CDS	12020	12160	.	+	0	ID=cds-WP_001541415.1;Parent=gene-C9E97_RS21240;Dbxref=GenBank:WP_001541415.1;Name=WP_001541415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453732.1;locus_tag=C9E97_RS21240;product=hypothetical protein;protein_id=WP_001541415.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	12130	12618	.	-	.	ID=gene-C9E97_RS21245;Name=C9E97_RS21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21245;old_locus_tag=C9E97_21740
NZ_PYKA01000132.1	Protein Homology	CDS	12130	12618	.	-	0	ID=cds-WP_000666051.1;Parent=gene-C9E97_RS21245;Dbxref=GenBank:WP_000666051.1;Name=WP_000666051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463323.1;locus_tag=C9E97_RS21245;product=arginine repressor;protein_id=WP_000666051.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	12805	14208	.	-	.	ID=gene-C9E97_RS21250;Name=C9E97_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21250;old_locus_tag=C9E97_21745
NZ_PYKA01000132.1	Protein Homology	CDS	12805	14208	.	-	0	ID=cds-WP_000514424.1;Parent=gene-C9E97_RS21250;Dbxref=GenBank:WP_000514424.1;Name=WP_000514424.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463324.1;locus_tag=C9E97_RS21250;product=YfcC family protein;protein_id=WP_000514424.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	14264	15268	.	-	.	ID=gene-C9E97_RS21255;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=C9E97_RS21255;old_locus_tag=C9E97_21750
NZ_PYKA01000132.1	Protein Homology	CDS	14264	15268	.	-	0	ID=cds-WP_000237031.1;Parent=gene-C9E97_RS21255;Dbxref=GenBank:WP_000237031.1;Name=WP_000237031.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463325.1;locus_tag=C9E97_RS21255;product=ornithine carbamoyltransferase;protein_id=WP_000237031.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	15380	16312	.	-	.	ID=gene-C9E97_RS21260;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=C9E97_RS21260;old_locus_tag=C9E97_21755
NZ_PYKA01000132.1	Protein Homology	CDS	15380	16312	.	-	0	ID=cds-WP_000428751.1;Parent=gene-C9E97_RS21260;Dbxref=GenBank:WP_000428751.1;Name=WP_000428751.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463326.1;locus_tag=C9E97_RS21260;product=carbamate kinase;protein_id=WP_000428751.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	16323	17543	.	-	.	ID=gene-C9E97_RS21265;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=C9E97_RS21265;old_locus_tag=C9E97_21760
NZ_PYKA01000132.1	Protein Homology	CDS	16323	17543	.	-	0	ID=cds-WP_000410846.1;Parent=gene-C9E97_RS21265;Dbxref=GenBank:WP_000410846.1;Name=WP_000410846.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463327.1;locus_tag=C9E97_RS21265;product=arginine deiminase;protein_id=WP_000410846.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	18219	18671	.	+	.	ID=gene-C9E97_RS21275;Name=C9E97_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21275;old_locus_tag=C9E97_21775
NZ_PYKA01000132.1	Protein Homology	CDS	18219	18671	.	+	0	ID=cds-WP_000583455.1;Parent=gene-C9E97_RS21275;Dbxref=GenBank:WP_000583455.1;Name=WP_000583455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463328.1;locus_tag=C9E97_RS21275;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000583455.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	18745	19749	.	-	.	ID=gene-C9E97_RS21280;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=C9E97_RS21280;old_locus_tag=C9E97_21780
NZ_PYKA01000132.1	Protein Homology	CDS	18745	19749	.	-	0	ID=cds-WP_000103041.1;Parent=gene-C9E97_RS21280;Dbxref=GenBank:WP_000103041.1;Name=WP_000103041.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463329.1;locus_tag=C9E97_RS21280;product=ornithine carbamoyltransferase;protein_id=WP_000103041.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	19915	20331	.	+	.	ID=gene-C9E97_RS21285;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=C9E97_RS21285;old_locus_tag=C9E97_21785
NZ_PYKA01000132.1	Protein Homology	CDS	19915	20331	.	+	0	ID=cds-WP_000002940.1;Parent=gene-C9E97_RS21285;Dbxref=GenBank:WP_000002940.1;Name=WP_000002940.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463330.1;locus_tag=C9E97_RS21285;product=ribonuclease E inhibitor RraB;protein_id=WP_000002940.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	20343	21155	.	+	.	ID=gene-C9E97_RS21290;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=C9E97_RS21290;old_locus_tag=C9E97_21790
NZ_PYKA01000132.1	Protein Homology	CDS	20343	21155	.	+	0	ID=cds-WP_000218459.1;Parent=gene-C9E97_RS21290;Dbxref=GenBank:WP_000218459.1;Name=WP_000218459.1;Ontology_term=GO:0006400,GO:0004497,GO:0045301,GO:0046872;gbkey=CDS;gene=miaE;go_function=monooxygenase activity|0004497||IEA,tRNA 2-(methylsulfanyl)-N(6)-isopentenyladenosine(37) hydroxylase activity|0045301||IEA,metal ion binding|0046872||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463331.1;locus_tag=C9E97_RS21290;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=WP_000218459.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	21389	21877	.	-	.	ID=gene-C9E97_RS21295;Name=C9E97_RS21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21295;old_locus_tag=C9E97_21795
NZ_PYKA01000132.1	Protein Homology	CDS	21389	21877	.	-	0	ID=cds-WP_000826193.1;Parent=gene-C9E97_RS21295;Dbxref=GenBank:WP_000826193.1;Name=WP_000826193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463332.1;locus_tag=C9E97_RS21295;product=DUF3617 domain-containing protein;protein_id=WP_000826193.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	21984	22487	.	-	.	ID=gene-C9E97_RS21300;Name=C9E97_RS21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21300;old_locus_tag=C9E97_21800
NZ_PYKA01000132.1	Protein Homology	CDS	21984	22487	.	-	0	ID=cds-WP_001519079.1;Parent=gene-C9E97_RS21300;Dbxref=GenBank:WP_001519079.1;Name=WP_001519079.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463333.1;locus_tag=C9E97_RS21300;product=GNAT family N-acetyltransferase;protein_id=WP_001519079.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	22682	23869	.	+	.	ID=gene-C9E97_RS21305;Name=C9E97_RS21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21305;old_locus_tag=C9E97_21805
NZ_PYKA01000132.1	Protein Homology	CDS	22682	23869	.	+	0	ID=cds-WP_001066975.1;Parent=gene-C9E97_RS21305;Dbxref=GenBank:WP_001066975.1;Name=WP_001066975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463334.1;locus_tag=C9E97_RS21305;product=YjgN family protein;protein_id=WP_001066975.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	24011	26866	.	-	.	ID=gene-C9E97_RS21310;Name=C9E97_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21310;old_locus_tag=C9E97_21810
NZ_PYKA01000132.1	Protein Homology	CDS	24011	26866	.	-	0	ID=cds-WP_135369496.1;Parent=gene-C9E97_RS21310;Dbxref=GenBank:WP_135369496.1;Name=WP_135369496.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=C9E97_RS21310;product=valine--tRNA ligase;protein_id=WP_135369496.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	26866	27309	.	-	.	ID=gene-C9E97_RS21315;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=C9E97_RS21315;old_locus_tag=C9E97_21815
NZ_PYKA01000132.1	Protein Homology	CDS	26866	27309	.	-	0	ID=cds-WP_001523689.1;Parent=gene-C9E97_RS21315;Dbxref=GenBank:WP_001523689.1;Name=WP_001523689.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=C9E97_RS21315;product=DNA polymerase III subunit chi;protein_id=WP_001523689.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	27446	28957	.	-	.	ID=gene-C9E97_RS21320;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=C9E97_RS21320;old_locus_tag=C9E97_21820
NZ_PYKA01000132.1	Protein Homology	CDS	27446	28957	.	-	0	ID=cds-WP_000397158.1;Parent=gene-C9E97_RS21320;Dbxref=GenBank:WP_000397158.1;Name=WP_000397158.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463337.1;locus_tag=C9E97_RS21320;product=leucyl aminopeptidase;protein_id=WP_000397158.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	29238	29288	.	+	.	ID=gene-C9E97_RS23900;Name=C9E97_RS23900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23900
NZ_PYKA01000132.1	Protein Homology	CDS	29238	29288	.	+	0	ID=cds-WP_212724070.1;Parent=gene-C9E97_RS23900;Dbxref=GenBank:WP_212724070.1;Name=WP_212724070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=C9E97_RS23900;product=hypothetical protein;protein_id=WP_212724070.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	29352	30452	.	+	.	ID=gene-C9E97_RS21330;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=C9E97_RS21330;old_locus_tag=C9E97_21835
NZ_PYKA01000132.1	Protein Homology	CDS	29352	30452	.	+	0	ID=cds-WP_000584132.1;Parent=gene-C9E97_RS21330;Dbxref=GenBank:WP_000584132.1;Name=WP_000584132.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463339.1;locus_tag=C9E97_RS21330;product=LPS export ABC transporter permease LptF;protein_id=WP_000584132.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	30452	31534	.	+	.	ID=gene-C9E97_RS21335;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=C9E97_RS21335;old_locus_tag=C9E97_21840
NZ_PYKA01000132.1	Protein Homology	CDS	30452	31534	.	+	0	ID=cds-WP_001182242.1;Parent=gene-C9E97_RS21335;Dbxref=GenBank:WP_001182242.1;Name=WP_001182242.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463340.1;locus_tag=C9E97_RS21335;product=LPS export ABC transporter permease LptG;protein_id=WP_001182242.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	31752	32750	.	-	.	ID=gene-C9E97_RS21340;Name=idnR;gbkey=Gene;gene=idnR;gene_biotype=protein_coding;gene_synonym=gntH,yjgS;locus_tag=C9E97_RS21340;old_locus_tag=C9E97_21845
NZ_PYKA01000132.1	Protein Homology	CDS	31752	32750	.	-	0	ID=cds-WP_001244065.1;Parent=gene-C9E97_RS21340;Dbxref=GenBank:WP_001244065.1;Name=WP_001244065.1;Ontology_term=GO:0006355,GO:0019521,GO:0003700;gbkey=CDS;gene=idnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463341.1;locus_tag=C9E97_RS21340;product=DNA-binding transcriptional regulator IdnR;protein_id=WP_001244065.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	32814	34133	.	-	.	ID=gene-C9E97_RS21345;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=protein_coding;locus_tag=C9E97_RS21345;old_locus_tag=C9E97_21850
NZ_PYKA01000132.1	Protein Homology	CDS	32814	34133	.	-	0	ID=cds-WP_001128352.1;Parent=gene-C9E97_RS21345;Dbxref=GenBank:WP_001128352.1;Name=WP_001128352.1;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=C9E97_RS21345;product=gnt-II system L-idonate transporter;protein_id=WP_001128352.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	34195	34959	.	-	.	ID=gene-C9E97_RS21350;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=C9E97_RS21350;old_locus_tag=C9E97_21855
NZ_PYKA01000132.1	Protein Homology	CDS	34195	34959	.	-	0	ID=cds-WP_000998688.1;Parent=gene-C9E97_RS21350;Dbxref=GenBank:WP_000998688.1;Name=WP_000998688.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463343.1;locus_tag=C9E97_RS21350;product=gluconate 5-dehydrogenase;protein_id=WP_000998688.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	34984	36015	.	-	.	ID=gene-C9E97_RS21355;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=C9E97_RS21355;old_locus_tag=C9E97_21860
NZ_PYKA01000132.1	Protein Homology	CDS	34984	36015	.	-	0	ID=cds-WP_000453351.1;Parent=gene-C9E97_RS21355;Dbxref=GenBank:WP_000453351.1;Name=WP_000453351.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463344.1;locus_tag=C9E97_RS21355;product=L-idonate 5-dehydrogenase;protein_id=WP_000453351.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	36232	36762	.	+	.	ID=gene-C9E97_RS21360;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=C9E97_RS21360;old_locus_tag=C9E97_21865
NZ_PYKA01000132.1	Protein Homology	CDS	36232	36762	.	+	0	ID=cds-WP_000896756.1;Parent=gene-C9E97_RS21360;Dbxref=GenBank:WP_000896756.1;Name=WP_000896756.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463345.1;locus_tag=C9E97_RS21360;product=gluconokinase;protein_id=WP_000896756.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	36790	37809	.	-	.	ID=gene-C9E97_RS21365;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=C9E97_RS21365;old_locus_tag=C9E97_21870
NZ_PYKA01000132.1	Protein Homology	CDS	36790	37809	.	-	0	ID=cds-WP_000152563.1;Parent=gene-C9E97_RS21365;Dbxref=GenBank:WP_000152563.1;Name=WP_000152563.1;Ontology_term=GO:0006631,GO:0008106,GO:0016616;gbkey=CDS;gene=ahr;go_function=alcohol dehydrogenase (NADP+) activity|0008106||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463346.1;locus_tag=C9E97_RS21365;product=NADPH-dependent aldehyde reductase Ahr;protein_id=WP_000152563.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	38032	38116	.	+	.	ID=gene-C9E97_RS21370;Name=C9E97_RS21370;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS21370;old_locus_tag=C9E97_21875
NZ_PYKA01000132.1	tRNAscan-SE	tRNA	38032	38116	.	+	.	ID=rna-C9E97_RS21370;Parent=gene-C9E97_RS21370;anticodon=(pos:38066..38068);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS21370;product=tRNA-Leu
NZ_PYKA01000132.1	tRNAscan-SE	exon	38032	38116	.	+	.	ID=exon-C9E97_RS21370-1;Parent=rna-C9E97_RS21370;anticodon=(pos:38066..38068);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS21370;product=tRNA-Leu
NZ_PYKA01000132.1	RefSeq	pseudogene	38335	38621	.	+	.	ID=gene-C9E97_RS21375;Name=C9E97_RS21375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS21375;old_locus_tag=C9E97_21880;pseudo=true
NZ_PYKA01000132.1	Protein Homology	CDS	38335	38621	.	+	0	ID=cds-C9E97_RS21375;Parent=gene-C9E97_RS21375;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463347.1;locus_tag=C9E97_RS21375;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	38618	38932	.	-	.	ID=gene-C9E97_RS21380;Name=C9E97_RS21380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21380;old_locus_tag=C9E97_21885
NZ_PYKA01000132.1	Protein Homology	CDS	38618	38932	.	-	0	ID=cds-WP_058653112.1;Parent=gene-C9E97_RS21380;Dbxref=GenBank:WP_058653112.1;Name=WP_058653112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000936735.1;locus_tag=C9E97_RS21380;product=hypothetical protein;protein_id=WP_058653112.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	39093	39872	.	+	.	ID=gene-C9E97_RS21385;Name=C9E97_RS21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21385;old_locus_tag=C9E97_21890
NZ_PYKA01000132.1	Protein Homology	CDS	39093	39872	.	+	0	ID=cds-WP_058653113.1;Parent=gene-C9E97_RS21385;Dbxref=GenBank:WP_058653113.1;Name=WP_058653113.1;Ontology_term=GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012737308.1;locus_tag=C9E97_RS21385;product=HNH endonuclease;protein_id=WP_058653113.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	40490	43348	.	+	.	ID=gene-C9E97_RS21390;Name=C9E97_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21390;old_locus_tag=C9E97_21895
NZ_PYKA01000132.1	Protein Homology	CDS	40490	43348	.	+	0	ID=cds-WP_001041499.1;Parent=gene-C9E97_RS21390;Dbxref=GenBank:WP_001041499.1;Name=WP_001041499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313288.2;locus_tag=C9E97_RS21390;product=DEAD/DEAH box helicase;protein_id=WP_001041499.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	43351	48291	.	+	.	ID=gene-C9E97_RS21395;Name=C9E97_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21395;old_locus_tag=C9E97_21900
NZ_PYKA01000132.1	Protein Homology	CDS	43351	48291	.	+	0	ID=cds-WP_135369495.1;Parent=gene-C9E97_RS21395;Dbxref=GenBank:WP_135369495.1;Name=WP_135369495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001229651.1;locus_tag=C9E97_RS21395;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_135369495.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	48291	54632	.	+	.	ID=gene-C9E97_RS21400;Name=C9E97_RS21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21400;old_locus_tag=C9E97_21905
NZ_PYKA01000132.1	Protein Homology	CDS	48291	54632	.	+	0	ID=cds-WP_135369494.1;Parent=gene-C9E97_RS21400;Dbxref=GenBank:WP_135369494.1;Name=WP_135369494.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313290.1;locus_tag=C9E97_RS21400;product=DEAD/DEAH box helicase;protein_id=WP_135369494.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	54629	56746	.	+	.	ID=gene-C9E97_RS21405;Name=C9E97_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21405;old_locus_tag=C9E97_21910
NZ_PYKA01000132.1	Protein Homology	CDS	54629	56746	.	+	0	ID=cds-WP_058653117.1;Parent=gene-C9E97_RS21405;Dbxref=GenBank:WP_058653117.1;Name=WP_058653117.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155072.1;locus_tag=C9E97_RS21405;product=ATP-dependent helicase;protein_id=WP_058653117.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	56888	57055	.	-	.	ID=gene-C9E97_RS23525;Name=C9E97_RS23525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23525
NZ_PYKA01000132.1	GeneMarkS-2+	CDS	56888	57055	.	-	0	ID=cds-WP_162798837.1;Parent=gene-C9E97_RS23525;Dbxref=GenBank:WP_162798837.1;Name=WP_162798837.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E97_RS23525;product=hypothetical protein;protein_id=WP_162798837.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	57179	57601	.	+	.	ID=gene-C9E97_RS21410;Name=C9E97_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21410;old_locus_tag=C9E97_21915
NZ_PYKA01000132.1	Protein Homology	CDS	57179	57601	.	+	0	ID=cds-WP_058653118.1;Parent=gene-C9E97_RS21410;Dbxref=GenBank:WP_058653118.1;Name=WP_058653118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000941934.1;locus_tag=C9E97_RS21410;product=fosfomycin resistance glutathione transferase FosA7.7;protein_id=WP_058653118.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	57954	58829	.	+	.	ID=gene-C9E97_RS21415;Name=C9E97_RS21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21415;old_locus_tag=C9E97_21920
NZ_PYKA01000132.1	Protein Homology	CDS	57954	58829	.	+	0	ID=cds-WP_000199884.1;Parent=gene-C9E97_RS21415;Dbxref=GenBank:WP_000199884.1;Name=WP_000199884.1;Ontology_term=GO:0009307,GO:0015666;gbkey=CDS;go_function=restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465694.1;locus_tag=C9E97_RS21415;product=phosphorothioated DNA-binding restriction endonuclease;protein_id=WP_000199884.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	59306	60022	.	-	.	ID=gene-C9E97_RS21420;Name=C9E97_RS21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21420;old_locus_tag=C9E97_21925
NZ_PYKA01000132.1	Protein Homology	CDS	59306	60022	.	-	0	ID=cds-WP_000532939.1;Parent=gene-C9E97_RS21420;Dbxref=GenBank:WP_000532939.1;Name=WP_000532939.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416490.1;locus_tag=C9E97_RS21420;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000532939.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	60582	62213	.	-	.	ID=gene-C9E97_RS21430;Name=C9E97_RS21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21430;old_locus_tag=C9E97_21935
NZ_PYKA01000132.1	Protein Homology	CDS	60582	62213	.	-	0	ID=cds-WP_135369135.1;Parent=gene-C9E97_RS21430;Dbxref=GenBank:WP_135369135.1;Name=WP_135369135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=C9E97_RS21430;product=class I SAM-dependent methyltransferase;protein_id=WP_135369135.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	62218	62475	.	-	.	ID=gene-C9E97_RS21435;Name=C9E97_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21435;old_locus_tag=C9E97_21940
NZ_PYKA01000132.1	Protein Homology	CDS	62218	62475	.	-	0	ID=cds-WP_001054380.1;Parent=gene-C9E97_RS21435;Dbxref=GenBank:WP_001054380.1;Name=WP_001054380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463360.1;locus_tag=C9E97_RS21435;product=YjhX family toxin;protein_id=WP_001054380.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	62964	63572	.	+	.	ID=gene-C9E97_RS21445;Name=C9E97_RS21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21445;old_locus_tag=C9E97_21955
NZ_PYKA01000132.1	Protein Homology	CDS	62964	63572	.	+	0	ID=cds-WP_000864865.1;Parent=gene-C9E97_RS21445;Dbxref=GenBank:WP_000864865.1;Name=WP_000864865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463361.1;locus_tag=C9E97_RS21445;product=DUF1062 domain-containing protein;protein_id=WP_000864865.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	63824	64819	.	+	.	ID=gene-C9E97_RS21450;Name=C9E97_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21450;old_locus_tag=C9E97_21960
NZ_PYKA01000132.1	Protein Homology	CDS	63824	64819	.	+	0	ID=cds-WP_001240360.1;Parent=gene-C9E97_RS21450;Dbxref=GenBank:WP_001240360.1;Name=WP_001240360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001240361.1;locus_tag=C9E97_RS21450;product=membrane protein;protein_id=WP_001240360.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	65095	66006	.	+	.	ID=gene-C9E97_RS21455;Name=C9E97_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21455;old_locus_tag=C9E97_21965
NZ_PYKA01000132.1	Protein Homology	CDS	65095	66006	.	+	0	ID=cds-WP_000556778.1;Parent=gene-C9E97_RS21455;Dbxref=GenBank:WP_000556778.1;Name=WP_000556778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463363.1;locus_tag=C9E97_RS21455;product=STM4504/CBY_0614 family protein;protein_id=WP_000556778.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	66211	66672	.	+	.	ID=gene-C9E97_RS21460;Name=C9E97_RS21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21460;old_locus_tag=C9E97_21970
NZ_PYKA01000132.1	Protein Homology	CDS	66211	66672	.	+	0	ID=cds-WP_001654330.1;Parent=gene-C9E97_RS21460;Dbxref=GenBank:WP_001654330.1;Name=WP_001654330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463364.1;locus_tag=C9E97_RS21460;product=DUF302 domain-containing protein;protein_id=WP_001654330.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	66669	67343	.	-	.	ID=gene-C9E97_RS21465;Name=C9E97_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21465;old_locus_tag=C9E97_21975
NZ_PYKA01000132.1	Protein Homology	CDS	66669	67343	.	-	0	ID=cds-WP_135369136.1;Parent=gene-C9E97_RS21465;Dbxref=GenBank:WP_135369136.1;Name=WP_135369136.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463365.1;locus_tag=C9E97_RS21465;product=dienelactone hydrolase family protein;protein_id=WP_135369136.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	67693	68466	.	+	.	ID=gene-C9E97_RS21470;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=C9E97_RS21470;old_locus_tag=C9E97_21985
NZ_PYKA01000132.1	Protein Homology	CDS	67693	68466	.	+	0	ID=cds-WP_000841654.1;Parent=gene-C9E97_RS21470;Dbxref=GenBank:WP_000841654.1;Name=WP_000841654.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463366.1;locus_tag=C9E97_RS21470;product=Uxu operon transcriptional regulator;protein_id=WP_000841654.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	68467	69480	.	-	.	ID=gene-C9E97_RS21475;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=C9E97_RS21475;old_locus_tag=C9E97_21990
NZ_PYKA01000132.1	Protein Homology	CDS	68467	69480	.	-	0	ID=cds-WP_135369137.1;Parent=gene-C9E97_RS21475;Dbxref=GenBank:WP_135369137.1;Name=WP_135369137.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463367.1;locus_tag=C9E97_RS21475;product=tryptophan--tRNA ligase;protein_id=WP_135369137.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	70198	70728	.	+	.	ID=gene-C9E97_RS21480;Name=C9E97_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21480;old_locus_tag=C9E97_21995
NZ_PYKA01000132.1	Protein Homology	CDS	70198	70728	.	+	0	ID=cds-WP_000907671.1;Parent=gene-C9E97_RS21480;Dbxref=GenBank:WP_000907671.1;Name=WP_000907671.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463368.3;locus_tag=C9E97_RS21480;product=Hcp family type VI secretion system effector;protein_id=WP_000907671.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	70967	71701	.	+	.	ID=gene-C9E97_RS21485;Name=C9E97_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21485;old_locus_tag=C9E97_22005
NZ_PYKA01000132.1	Protein Homology	CDS	70967	71701	.	+	0	ID=cds-WP_000683251.1;Parent=gene-C9E97_RS21485;Dbxref=GenBank:WP_000683251.1;Name=WP_000683251.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463369.1;locus_tag=C9E97_RS21485;product=aspartate/glutamate racemase family protein;protein_id=WP_000683251.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	71707	72615	.	-	.	ID=gene-C9E97_RS21490;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=C9E97_RS21490;old_locus_tag=C9E97_22010
NZ_PYKA01000132.1	Protein Homology	CDS	71707	72615	.	-	0	ID=cds-WP_000383509.1;Parent=gene-C9E97_RS21490;Dbxref=GenBank:WP_000383509.1;Name=WP_000383509.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463370.1;locus_tag=C9E97_RS21490;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_000383509.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	72734	73906	.	-	.	ID=gene-C9E97_RS21495;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=C9E97_RS21495;old_locus_tag=C9E97_22015
NZ_PYKA01000132.1	Protein Homology	CDS	72734	73906	.	-	0	ID=cds-WP_001113051.1;Parent=gene-C9E97_RS21495;Dbxref=GenBank:WP_001113051.1;Name=WP_001113051.1;Ontology_term=GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463371.1;locus_tag=C9E97_RS21495;product=beta-aspartyl-peptidase;protein_id=WP_001113051.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	73919	74380	.	-	.	ID=gene-C9E97_RS21500;Name=C9E97_RS21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21500;old_locus_tag=C9E97_22020
NZ_PYKA01000132.1	Protein Homology	CDS	73919	74380	.	-	0	ID=cds-WP_000211979.1;Parent=gene-C9E97_RS21500;Dbxref=GenBank:WP_000211979.1;Name=WP_000211979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463372.1;locus_tag=C9E97_RS21500;product=YjiG family protein;protein_id=WP_000211979.1;transl_table=11
NZ_PYKA01000132.1	RefSeq	gene	74377	75048	.	-	.	ID=gene-C9E97_RS21505;Name=C9E97_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21505;old_locus_tag=C9E97_22025
NZ_PYKA01000132.1	Protein Homology	CDS	74377	75048	.	-	0	ID=cds-WP_000068752.1;Parent=gene-C9E97_RS21505;Dbxref=GenBank:WP_000068752.1;Name=WP_000068752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418750.2;locus_tag=C9E97_RS21505;product=nucleoside recognition domain-containing protein;protein_id=WP_000068752.1;transl_table=11
##sequence-region NZ_PYKA01000065.1 1 75296
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000065.1	RefSeq	region	1	75296	.	+	.	ID=NZ_PYKA01000065.1:1..75296;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000065.1	RefSeq	pseudogene	1	202	.	+	.	ID=gene-C9E97_RS09520;Name=C9E97_RS09520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS09520;old_locus_tag=C9E97_09720;partial=true;pseudo=true;start_range=.,1
NZ_PYKA01000065.1	Protein Homology	CDS	1	202	.	+	1	ID=cds-C9E97_RS09520;Parent=gene-C9E97_RS09520;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461824.1;locus_tag=C9E97_RS09520;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	475	822	.	-	.	ID=gene-C9E97_RS09525;Name=C9E97_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09525;old_locus_tag=C9E97_09725
NZ_PYKA01000065.1	Protein Homology	CDS	475	822	.	-	0	ID=cds-WP_135369355.1;Parent=gene-C9E97_RS09525;Dbxref=GenBank:WP_135369355.1;Name=WP_135369355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461823.1;locus_tag=C9E97_RS09525;product=DUF1493 family protein;protein_id=WP_135369355.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	pseudogene	807	1256	.	-	.	ID=gene-C9E97_RS09530;Name=C9E97_RS09530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS09530;old_locus_tag=C9E97_09730;pseudo=true
NZ_PYKA01000065.1	Protein Homology	CDS	807	1256	.	-	0	ID=cds-C9E97_RS09530;Parent=gene-C9E97_RS09530;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461822.1;locus_tag=C9E97_RS09530;product=STM2901 family protein;pseudo=true;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	1688	2131	.	-	.	ID=gene-C9E97_RS09535;Name=invH;gbkey=Gene;gene=invH;gene_biotype=protein_coding;locus_tag=C9E97_RS09535;old_locus_tag=C9E97_09735
NZ_PYKA01000065.1	Protein Homology	CDS	1688	2131	.	-	0	ID=cds-WP_000715096.1;Parent=gene-C9E97_RS09535;Dbxref=GenBank:WP_000715096.1;Name=WP_000715096.1;gbkey=CDS;gene=invH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461821.1;locus_tag=C9E97_RS09535;product=SPI-1 type III secretion system invasion lipoprotein InvH;protein_id=WP_000715096.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	2588	3238	.	+	.	ID=gene-C9E97_RS09540;Name=invF;gbkey=Gene;gene=invF;gene_biotype=protein_coding;locus_tag=C9E97_RS09540;old_locus_tag=C9E97_09740
NZ_PYKA01000065.1	Protein Homology	CDS	2588	3238	.	+	0	ID=cds-WP_001674874.1;Parent=gene-C9E97_RS09540;Dbxref=GenBank:WP_001674874.1;Name=WP_001674874.1;gbkey=CDS;gene=invF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461820.1;locus_tag=C9E97_RS09540;product=type III secretion system transcriptional activator InvF;protein_id=WP_001674874.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	3235	4923	.	+	.	ID=gene-C9E97_RS09545;Name=invG;gbkey=Gene;gene=invG;gene_biotype=protein_coding;locus_tag=C9E97_RS09545;old_locus_tag=C9E97_09745
NZ_PYKA01000065.1	Protein Homology	CDS	3235	4923	.	+	0	ID=cds-WP_000848102.1;Parent=gene-C9E97_RS09545;Dbxref=GenBank:WP_000848102.1;Name=WP_000848102.1;gbkey=CDS;gene=invG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461819.1;locus_tag=C9E97_RS09545;product=type III secretion system outer membrane ring protein InvG;protein_id=WP_000848102.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	4920	6038	.	+	.	ID=gene-C9E97_RS09550;Name=invE;gbkey=Gene;gene=invE;gene_biotype=protein_coding;locus_tag=C9E97_RS09550;old_locus_tag=C9E97_09750
NZ_PYKA01000065.1	Protein Homology	CDS	4920	6038	.	+	0	ID=cds-WP_000612171.1;Parent=gene-C9E97_RS09550;Dbxref=GenBank:WP_000612171.1;Name=WP_000612171.1;gbkey=CDS;gene=invE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461818.1;locus_tag=C9E97_RS09550;product=type III secretion system gatekeeper InvE;protein_id=WP_000612171.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	6063	8120	.	+	.	ID=gene-C9E97_RS09555;Name=invA;gbkey=Gene;gene=invA;gene_biotype=protein_coding;locus_tag=C9E97_RS09555;old_locus_tag=C9E97_09755
NZ_PYKA01000065.1	Protein Homology	CDS	6063	8120	.	+	0	ID=cds-WP_000927219.1;Parent=gene-C9E97_RS09555;Dbxref=GenBank:WP_000927219.1;Name=WP_000927219.1;gbkey=CDS;gene=invA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461817.1;locus_tag=C9E97_RS09555;product=type III secretion system export apparatus protein InvA;protein_id=WP_000927219.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	8144	8551	.	+	.	ID=gene-C9E97_RS09560;Name=spaK;gbkey=Gene;gene=spaK;gene_biotype=protein_coding;locus_tag=C9E97_RS09560;old_locus_tag=C9E97_09760
NZ_PYKA01000065.1	Protein Homology	CDS	8144	8551	.	+	0	ID=cds-WP_001164066.1;Parent=gene-C9E97_RS09560;Dbxref=GenBank:WP_001164066.1;Name=WP_001164066.1;gbkey=CDS;gene=spaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461816.1;locus_tag=C9E97_RS09560;product=SPI-1 type III secretion system chaperone SpaK;protein_id=WP_001164066.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	8548	9843	.	+	.	ID=gene-C9E97_RS09565;Name=invC;gbkey=Gene;gene=invC;gene_biotype=protein_coding;locus_tag=C9E97_RS09565;old_locus_tag=C9E97_09765
NZ_PYKA01000065.1	Protein Homology	CDS	8548	9843	.	+	0	ID=cds-WP_000856766.1;Parent=gene-C9E97_RS09565;Dbxref=GenBank:WP_000856766.1;Name=WP_000856766.1;gbkey=CDS;gene=invC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461815.1;locus_tag=C9E97_RS09565;product=SctN family type III secretion system ATPase InvC;protein_id=WP_000856766.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	9821	10264	.	+	.	ID=gene-C9E97_RS09570;Name=spaM;gbkey=Gene;gene=spaM;gene_biotype=protein_coding;locus_tag=C9E97_RS09570;old_locus_tag=C9E97_09770
NZ_PYKA01000065.1	Protein Homology	CDS	9821	10264	.	+	0	ID=cds-WP_000555884.1;Parent=gene-C9E97_RS09570;Dbxref=GenBank:WP_000555884.1;Name=WP_000555884.1;gbkey=CDS;gene=spaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461814.1;locus_tag=C9E97_RS09570;product=SPI-1 type III secretion system protein SpaM;protein_id=WP_000555884.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	10264	11274	.	+	.	ID=gene-C9E97_RS09575;Name=spaN;gbkey=Gene;gene=spaN;gene_biotype=protein_coding;locus_tag=C9E97_RS09575;old_locus_tag=C9E97_09775
NZ_PYKA01000065.1	Protein Homology	CDS	10264	11274	.	+	0	ID=cds-WP_000503107.1;Parent=gene-C9E97_RS09575;Dbxref=GenBank:WP_000503107.1;Name=WP_000503107.1;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461813.1;locus_tag=C9E97_RS09575;product=SPI-1 type III secretion system protein SpaN;protein_id=WP_000503107.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	11274	12185	.	+	.	ID=gene-C9E97_RS09580;Name=spaO;gbkey=Gene;gene=spaO;gene_biotype=protein_coding;locus_tag=C9E97_RS09580;old_locus_tag=C9E97_09780
NZ_PYKA01000065.1	Protein Homology	CDS	11274	12185	.	+	0	ID=cds-WP_000058741.1;Parent=gene-C9E97_RS09580;Dbxref=GenBank:WP_000058741.1;Name=WP_000058741.1;gbkey=CDS;gene=spaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461812.1;locus_tag=C9E97_RS09580;product=SPI-1 type III secretion system protein SpaO;protein_id=WP_000058741.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	12175	12849	.	+	.	ID=gene-C9E97_RS09585;Name=spaP;gbkey=Gene;gene=spaP;gene_biotype=protein_coding;locus_tag=C9E97_RS09585;old_locus_tag=C9E97_09785
NZ_PYKA01000065.1	Protein Homology	CDS	12175	12849	.	+	0	ID=cds-WP_135369354.1;Parent=gene-C9E97_RS09585;Dbxref=GenBank:WP_135369354.1;Name=WP_135369354.1;gbkey=CDS;gene=spaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461811.1;locus_tag=C9E97_RS09585;product=SPI-1 type III secretion system export apparatus protein SpaP;protein_id=WP_135369354.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	12875	13135	.	+	.	ID=gene-C9E97_RS09590;Name=spaQ;gbkey=Gene;gene=spaQ;gene_biotype=protein_coding;locus_tag=C9E97_RS09590;old_locus_tag=C9E97_09790
NZ_PYKA01000065.1	Protein Homology	CDS	12875	13135	.	+	0	ID=cds-WP_000342503.1;Parent=gene-C9E97_RS09590;Dbxref=GenBank:WP_000342503.1;Name=WP_000342503.1;gbkey=CDS;gene=spaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461810.1;locus_tag=C9E97_RS09590;product=SPI-1 type III secretion system export apparatus protein SpaQ;protein_id=WP_000342503.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	13139	13930	.	+	.	ID=gene-C9E97_RS09595;Name=spaR;gbkey=Gene;gene=spaR;gene_biotype=protein_coding;locus_tag=C9E97_RS09595;old_locus_tag=C9E97_09795
NZ_PYKA01000065.1	Protein Homology	CDS	13139	13930	.	+	0	ID=cds-WP_000498965.1;Parent=gene-C9E97_RS09595;Dbxref=GenBank:WP_000498965.1;Name=WP_000498965.1;gbkey=CDS;gene=spaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461809.1;locus_tag=C9E97_RS09595;product=SPI-1 type III secretion system export apparatus protein SpaR;protein_id=WP_000498965.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	13917	14987	.	+	.	ID=gene-C9E97_RS09600;Name=spaS;gbkey=Gene;gene=spaS;gene_biotype=protein_coding;locus_tag=C9E97_RS09600;old_locus_tag=C9E97_09800
NZ_PYKA01000065.1	Protein Homology	CDS	13917	14987	.	+	0	ID=cds-WP_000097721.1;Parent=gene-C9E97_RS09600;Dbxref=GenBank:WP_000097721.1;Name=WP_000097721.1;gbkey=CDS;gene=spaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461808.1;locus_tag=C9E97_RS09600;product=SPI-1 type III secretion system export apparatus protein SpaS;protein_id=WP_000097721.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	15125	15622	.	+	.	ID=gene-C9E97_RS09605;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=C9E97_RS09605;old_locus_tag=C9E97_09805
NZ_PYKA01000065.1	Protein Homology	CDS	15125	15622	.	+	0	ID=cds-WP_000386309.1;Parent=gene-C9E97_RS09605;Dbxref=GenBank:WP_000386309.1;Name=WP_000386309.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461807.1;locus_tag=C9E97_RS09605;product=SycD/LcrH family type III secretion system chaperone SicA;protein_id=WP_000386309.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	15625	17406	.	+	.	ID=gene-C9E97_RS09610;Name=sipB;gbkey=Gene;gene=sipB;gene_biotype=protein_coding;locus_tag=C9E97_RS09610;old_locus_tag=C9E97_09810
NZ_PYKA01000065.1	Protein Homology	CDS	15625	17406	.	+	0	ID=cds-WP_000245782.1;Parent=gene-C9E97_RS09610;Dbxref=GenBank:WP_000245782.1;Name=WP_000245782.1;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461806.1;locus_tag=C9E97_RS09610;product=SPI-1 type III secretion system needle tip complex protein SipB;protein_id=WP_000245782.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	17434	18663	.	+	.	ID=gene-C9E97_RS09615;Name=sipC;gbkey=Gene;gene=sipC;gene_biotype=protein_coding;locus_tag=C9E97_RS09615;old_locus_tag=C9E97_09815
NZ_PYKA01000065.1	Protein Homology	CDS	17434	18663	.	+	0	ID=cds-WP_000909019.1;Parent=gene-C9E97_RS09615;Dbxref=GenBank:WP_000909019.1;Name=WP_000909019.1;gbkey=CDS;gene=sipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461805.1;locus_tag=C9E97_RS09615;product=SPI-1 type III secretion system needle tip complex protein SipC;protein_id=WP_000909019.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	18734	19765	.	+	.	ID=gene-C9E97_RS09620;Name=sipD;gbkey=Gene;gene=sipD;gene_biotype=protein_coding;locus_tag=C9E97_RS09620;old_locus_tag=C9E97_09820
NZ_PYKA01000065.1	Protein Homology	CDS	18734	19765	.	+	0	ID=cds-WP_023231968.1;Parent=gene-C9E97_RS09620;Dbxref=GenBank:WP_023231968.1;Name=WP_023231968.1;gbkey=CDS;gene=sipD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461804.1;locus_tag=C9E97_RS09620;product=SPI-1 type III secretion system needle tip complex protein SipD;protein_id=WP_023231968.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	19784	21841	.	+	.	ID=gene-C9E97_RS09625;Name=sipA;gbkey=Gene;gene=sipA;gene_biotype=protein_coding;locus_tag=C9E97_RS09625;old_locus_tag=C9E97_09825
NZ_PYKA01000065.1	Protein Homology	CDS	19784	21841	.	+	0	ID=cds-WP_135369353.1;Parent=gene-C9E97_RS09625;Dbxref=GenBank:WP_135369353.1;Name=WP_135369353.1;gbkey=CDS;gene=sipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461803.1;locus_tag=C9E97_RS09625;product=SPI-1 type III secretion system effector SipA;protein_id=WP_135369353.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	21860	22108	.	+	.	ID=gene-C9E97_RS09630;Name=C9E97_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09630;old_locus_tag=C9E97_09830
NZ_PYKA01000065.1	Protein Homology	CDS	21860	22108	.	+	0	ID=cds-WP_001055579.1;Parent=gene-C9E97_RS09630;Dbxref=GenBank:WP_001055579.1;Name=WP_001055579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461802.1;locus_tag=C9E97_RS09630;product=acyl carrier protein;protein_id=WP_001055579.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	22152	22412	.	+	.	ID=gene-C9E97_RS09635;Name=C9E97_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09635;old_locus_tag=C9E97_09835
NZ_PYKA01000065.1	Protein Homology	CDS	22152	22412	.	+	0	ID=cds-WP_000692249.1;Parent=gene-C9E97_RS09635;Dbxref=GenBank:WP_000692249.1;Name=WP_000692249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449260.1;locus_tag=C9E97_RS09635;product=hypothetical protein;protein_id=WP_000692249.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	22439	22831	.	+	.	ID=gene-C9E97_RS09640;Name=sicP;gbkey=Gene;gene=sicP;gene_biotype=protein_coding;locus_tag=C9E97_RS09640;old_locus_tag=C9E97_09840
NZ_PYKA01000065.1	Protein Homology	CDS	22439	22831	.	+	0	ID=cds-WP_001748715.1;Parent=gene-C9E97_RS09640;Dbxref=GenBank:WP_001748715.1;Name=WP_001748715.1;gbkey=CDS;gene=sicP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461800.1;locus_tag=C9E97_RS09640;product=chaperone SicP;protein_id=WP_001748715.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	22818	24449	.	+	.	ID=gene-C9E97_RS09645;Name=sptP;gbkey=Gene;gene=sptP;gene_biotype=protein_coding;locus_tag=C9E97_RS09645;old_locus_tag=C9E97_09845
NZ_PYKA01000065.1	Protein Homology	CDS	22818	24449	.	+	0	ID=cds-WP_135369352.1;Parent=gene-C9E97_RS09645;Dbxref=GenBank:WP_135369352.1;Name=WP_135369352.1;gbkey=CDS;gene=sptP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461799.1;locus_tag=C9E97_RS09645;product=SPI-1 type III secretion system effector GTPase-activating protein SptP;protein_id=WP_135369352.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	24503	24985	.	-	.	ID=gene-C9E97_RS09650;Name=iagB;gbkey=Gene;gene=iagB;gene_biotype=protein_coding;locus_tag=C9E97_RS09650;old_locus_tag=C9E97_09850
NZ_PYKA01000065.1	Protein Homology	CDS	24503	24985	.	-	0	ID=cds-WP_000558930.1;Parent=gene-C9E97_RS09650;Dbxref=GenBank:WP_000558930.1;Name=WP_000558930.1;gbkey=CDS;gene=iagB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461798.1;locus_tag=C9E97_RS09650;product=SPI-1 type III secretion system invasion protein IagB;protein_id=WP_000558930.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	25003	26664	.	-	.	ID=gene-C9E97_RS09655;Name=hilA;gbkey=Gene;gene=hilA;gene_biotype=protein_coding;locus_tag=C9E97_RS09655;old_locus_tag=C9E97_09855
NZ_PYKA01000065.1	Protein Homology	CDS	25003	26664	.	-	0	ID=cds-WP_001120085.1;Parent=gene-C9E97_RS09655;Dbxref=GenBank:WP_001120085.1;Name=WP_001120085.1;gbkey=CDS;gene=hilA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461797.1;locus_tag=C9E97_RS09655;product=transcriptional regulator HilA;protein_id=WP_001120085.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	27753	28682	.	-	.	ID=gene-C9E97_RS09660;Name=hilD;gbkey=Gene;gene=hilD;gene_biotype=protein_coding;locus_tag=C9E97_RS09660;old_locus_tag=C9E97_09860
NZ_PYKA01000065.1	Protein Homology	CDS	27753	28682	.	-	0	ID=cds-WP_000432702.1;Parent=gene-C9E97_RS09660;Dbxref=GenBank:WP_000432702.1;Name=WP_000432702.1;gbkey=CDS;gene=hilD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461796.1;locus_tag=C9E97_RS09660;product=transcriptional regulator HilD;protein_id=WP_000432702.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	28998	30176	.	+	.	ID=gene-C9E97_RS09665;Name=prgH;gbkey=Gene;gene=prgH;gene_biotype=protein_coding;locus_tag=C9E97_RS09665;old_locus_tag=C9E97_09865
NZ_PYKA01000065.1	Protein Homology	CDS	28998	30176	.	+	0	ID=cds-WP_000450192.1;Parent=gene-C9E97_RS09665;Dbxref=GenBank:WP_000450192.1;Name=WP_000450192.1;gbkey=CDS;gene=prgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461795.1;locus_tag=C9E97_RS09665;product=type III secretion system inner membrane ring protein PrgH;protein_id=WP_000450192.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	30201	30443	.	+	.	ID=gene-C9E97_RS09670;Name=prgI;gbkey=Gene;gene=prgI;gene_biotype=protein_coding;locus_tag=C9E97_RS09670;old_locus_tag=C9E97_09870
NZ_PYKA01000065.1	Protein Homology	CDS	30201	30443	.	+	0	ID=cds-WP_000235229.1;Parent=gene-C9E97_RS09670;Dbxref=GenBank:WP_000235229.1;Name=WP_000235229.1;gbkey=CDS;gene=prgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461794.1;locus_tag=C9E97_RS09670;product=type III secretion system needle filament protein PrgI;protein_id=WP_000235229.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	30462	30767	.	+	.	ID=gene-C9E97_RS09675;Name=prgJ;gbkey=Gene;gene=prgJ;gene_biotype=protein_coding;locus_tag=C9E97_RS09675;old_locus_tag=C9E97_09875
NZ_PYKA01000065.1	Protein Homology	CDS	30462	30767	.	+	0	ID=cds-WP_000020431.1;Parent=gene-C9E97_RS09675;Dbxref=GenBank:WP_000020431.1;Name=WP_000020431.1;gbkey=CDS;gene=prgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461793.1;locus_tag=C9E97_RS09675;product=type III secretion system inner rod protein PrgJ;protein_id=WP_000020431.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	30764	31522	.	+	.	ID=gene-C9E97_RS09680;Name=prgK;gbkey=Gene;gene=prgK;gene_biotype=protein_coding;locus_tag=C9E97_RS09680;old_locus_tag=C9E97_09880
NZ_PYKA01000065.1	Protein Homology	CDS	30764	31522	.	+	0	ID=cds-WP_000621238.1;Parent=gene-C9E97_RS09680;Dbxref=GenBank:WP_000621238.1;Name=WP_000621238.1;gbkey=CDS;gene=prgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461792.1;locus_tag=C9E97_RS09680;product=type III secretion system inner membrane ring lipoprotein PrgK;protein_id=WP_000621238.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	31494	32093	.	+	.	ID=gene-C9E97_RS09685;Name=orgA;gbkey=Gene;gene=orgA;gene_biotype=protein_coding;locus_tag=C9E97_RS09685;old_locus_tag=C9E97_09885
NZ_PYKA01000065.1	Protein Homology	CDS	31494	32093	.	+	0	ID=cds-WP_001591231.1;Parent=gene-C9E97_RS09685;Dbxref=GenBank:WP_001591231.1;Name=WP_001591231.1;gbkey=CDS;gene=orgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461791.1;locus_tag=C9E97_RS09685;product=oxygen-regulated invasion protein OrgA;protein_id=WP_001591231.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	32050	32730	.	+	.	ID=gene-C9E97_RS09690;Name=orgB;gbkey=Gene;gene=orgB;gene_biotype=protein_coding;locus_tag=C9E97_RS09690;old_locus_tag=C9E97_09890
NZ_PYKA01000065.1	Protein Homology	CDS	32050	32730	.	+	0	ID=cds-WP_000916654.1;Parent=gene-C9E97_RS09690;Dbxref=GenBank:WP_000916654.1;Name=WP_000916654.1;gbkey=CDS;gene=orgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461790.1;locus_tag=C9E97_RS09690;product=type III secretion system linker protein OrgB;protein_id=WP_000916654.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	32727	33179	.	+	.	ID=gene-C9E97_RS09695;Name=C9E97_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09695;old_locus_tag=C9E97_09895
NZ_PYKA01000065.1	Protein Homology	CDS	32727	33179	.	+	0	ID=cds-WP_000612179.1;Parent=gene-C9E97_RS09695;Dbxref=GenBank:WP_000612179.1;Name=WP_000612179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461789.1;locus_tag=C9E97_RS09695;product=type III secretion system effector protein OrgC;protein_id=WP_000612179.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	33524	34411	.	+	.	ID=gene-C9E97_RS09700;Name=hilC;gbkey=Gene;gene=hilC;gene_biotype=protein_coding;locus_tag=C9E97_RS09700;old_locus_tag=C9E97_09900
NZ_PYKA01000065.1	Protein Homology	CDS	33524	34411	.	+	0	ID=cds-WP_000243998.1;Parent=gene-C9E97_RS09700;Dbxref=GenBank:WP_000243998.1;Name=WP_000243998.1;gbkey=CDS;gene=hilC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461788.1;locus_tag=C9E97_RS09700;product=invasion transcriptional regulator HilC;protein_id=WP_000243998.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	34796	35551	.	+	.	ID=gene-C9E97_RS09705;Name=sprB;gbkey=Gene;gene=sprB;gene_biotype=protein_coding;locus_tag=C9E97_RS09705;old_locus_tag=C9E97_09910
NZ_PYKA01000065.1	Protein Homology	CDS	34796	35551	.	+	0	ID=cds-WP_076735875.1;Parent=gene-C9E97_RS09705;Dbxref=GenBank:WP_076735875.1;Name=WP_076735875.1;gbkey=CDS;gene=sprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461787.1;locus_tag=C9E97_RS09705;product=transcriptional regulator SprB;protein_id=WP_076735875.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	35831	36679	.	-	.	ID=gene-C9E97_RS09715;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=C9E97_RS09715;old_locus_tag=C9E97_09920
NZ_PYKA01000065.1	Protein Homology	CDS	35831	36679	.	-	0	ID=cds-WP_000480208.1;Parent=gene-C9E97_RS09715;Dbxref=GenBank:WP_000480208.1;Name=WP_000480208.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461785.1;locus_tag=C9E97_RS09715;product=iron/manganese ABC transporter permease subunit SitD;protein_id=WP_000480208.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	36670	37530	.	-	.	ID=gene-C9E97_RS09720;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=C9E97_RS09720;old_locus_tag=C9E97_09925
NZ_PYKA01000065.1	Protein Homology	CDS	36670	37530	.	-	0	ID=cds-WP_001104336.1;Parent=gene-C9E97_RS09720;Dbxref=GenBank:WP_001104336.1;Name=WP_001104336.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461784.1;locus_tag=C9E97_RS09720;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WP_001104336.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	37527	38348	.	-	.	ID=gene-C9E97_RS09725;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=C9E97_RS09725;old_locus_tag=C9E97_09930
NZ_PYKA01000065.1	Protein Homology	CDS	37527	38348	.	-	0	ID=cds-WP_023181876.1;Parent=gene-C9E97_RS09725;Dbxref=GenBank:WP_023181876.1;Name=WP_023181876.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461783.1;locus_tag=C9E97_RS09725;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=WP_023181876.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	38345	39262	.	-	.	ID=gene-C9E97_RS09730;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=C9E97_RS09730;old_locus_tag=C9E97_09935
NZ_PYKA01000065.1	Protein Homology	CDS	38345	39262	.	-	0	ID=cds-WP_000182930.1;Parent=gene-C9E97_RS09730;Dbxref=GenBank:WP_000182930.1;Name=WP_000182930.1;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461782.1;locus_tag=C9E97_RS09730;product=iron/manganese ABC transporter substrate-binding protein SitA;protein_id=WP_000182930.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	39444	39788	.	+	.	ID=gene-C9E97_RS09735;Name=C9E97_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09735;old_locus_tag=C9E97_09940
NZ_PYKA01000065.1	Protein Homology	CDS	39444	39788	.	+	0	ID=cds-WP_001117944.1;Parent=gene-C9E97_RS09735;Dbxref=GenBank:WP_001117944.1;Name=WP_001117944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461781.1;locus_tag=C9E97_RS09735;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_001117944.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	39850	41928	.	-	.	ID=gene-C9E97_RS09740;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=C9E97_RS09740;old_locus_tag=C9E97_09945
NZ_PYKA01000065.1	Protein Homology	CDS	39850	41928	.	-	0	ID=cds-WP_000122692.1;Parent=gene-C9E97_RS09740;Dbxref=GenBank:WP_000122692.1;Name=WP_000122692.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461780.1;locus_tag=C9E97_RS09740;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_000122692.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	42147	43157	.	-	.	ID=gene-C9E97_RS09745;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=C9E97_RS09745;old_locus_tag=C9E97_09950
NZ_PYKA01000065.1	Protein Homology	CDS	42147	43157	.	-	0	ID=cds-WP_001059953.1;Parent=gene-C9E97_RS09745;Dbxref=GenBank:WP_001059953.1;Name=WP_001059953.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=C9E97_RS09745;product=hydrogenase expression/formation protein HypE;protein_id=WP_001059953.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	43154	44275	.	-	.	ID=gene-C9E97_RS09750;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=C9E97_RS09750;old_locus_tag=C9E97_09955
NZ_PYKA01000065.1	Protein Homology	CDS	43154	44275	.	-	0	ID=cds-WP_001212962.1;Parent=gene-C9E97_RS09750;Dbxref=GenBank:WP_001212962.1;Name=WP_001212962.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461778.2;locus_tag=C9E97_RS09750;product=hydrogenase formation protein HypD;protein_id=WP_001212962.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	44275	44547	.	-	.	ID=gene-C9E97_RS09755;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=C9E97_RS09755;old_locus_tag=C9E97_09960
NZ_PYKA01000065.1	Protein Homology	CDS	44275	44547	.	-	0	ID=cds-WP_000334871.1;Parent=gene-C9E97_RS09755;Dbxref=GenBank:WP_000334871.1;Name=WP_000334871.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461777.1;locus_tag=C9E97_RS09755;product=hydrogenase 3 maturation protein HypC;protein_id=WP_000334871.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	44538	45410	.	-	.	ID=gene-C9E97_RS09760;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=C9E97_RS09760;old_locus_tag=C9E97_09965
NZ_PYKA01000065.1	Protein Homology	CDS	44538	45410	.	-	0	ID=cds-WP_000337646.1;Parent=gene-C9E97_RS09760;Dbxref=GenBank:WP_000337646.1;Name=WP_000337646.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461776.1;locus_tag=C9E97_RS09760;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_000337646.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	45479	45835	.	-	.	ID=gene-C9E97_RS09765;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=C9E97_RS09765;old_locus_tag=C9E97_09970
NZ_PYKA01000065.1	Protein Homology	CDS	45479	45835	.	-	0	ID=cds-WP_000544461.1;Parent=gene-C9E97_RS09765;Dbxref=GenBank:WP_000544461.1;Name=WP_000544461.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461775.1;locus_tag=C9E97_RS09765;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544461.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	46045	46506	.	+	.	ID=gene-C9E97_RS09775;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=C9E97_RS09775;old_locus_tag=C9E97_09980
NZ_PYKA01000065.1	Protein Homology	CDS	46045	46506	.	+	0	ID=cds-WP_000158075.1;Parent=gene-C9E97_RS09775;Dbxref=GenBank:WP_000158075.1;Name=WP_000158075.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461774.1;locus_tag=C9E97_RS09775;product=formate hydrogenlyase regulator HycA;protein_id=WP_000158075.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	46652	47260	.	+	.	ID=gene-C9E97_RS09780;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=C9E97_RS09780;old_locus_tag=C9E97_09985
NZ_PYKA01000065.1	Protein Homology	CDS	46652	47260	.	+	0	ID=cds-WP_001079164.1;Parent=gene-C9E97_RS09780;Dbxref=GenBank:WP_001079164.1;Name=WP_001079164.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461773.1;locus_tag=C9E97_RS09780;product=formate hydrogenlyase subunit HycB;protein_id=WP_001079164.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	47260	49086	.	+	.	ID=gene-C9E97_RS09785;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=C9E97_RS09785;old_locus_tag=C9E97_09990
NZ_PYKA01000065.1	Protein Homology	CDS	47260	49086	.	+	0	ID=cds-WP_021294304.1;Parent=gene-C9E97_RS09785;Dbxref=GenBank:WP_021294304.1;Name=WP_021294304.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461772.2;locus_tag=C9E97_RS09785;product=formate hydrogenlyase subunit 3;protein_id=WP_021294304.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	49089	50012	.	+	.	ID=gene-C9E97_RS09790;Name=C9E97_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09790;old_locus_tag=C9E97_09995
NZ_PYKA01000065.1	Protein Homology	CDS	49089	50012	.	+	0	ID=cds-WP_000110570.1;Parent=gene-C9E97_RS09790;Dbxref=GenBank:WP_000110570.1;Name=WP_000110570.1;Ontology_term=GO:0022900,GO:0016491,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=oxidoreductase activity|0016491||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461771.1;locus_tag=C9E97_RS09790;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_000110570.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	50030	51739	.	+	.	ID=gene-C9E97_RS09795;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=C9E97_RS09795;old_locus_tag=C9E97_10000
NZ_PYKA01000065.1	Protein Homology	CDS	50030	51739	.	+	0	ID=cds-WP_001288155.1;Parent=gene-C9E97_RS09795;Dbxref=GenBank:WP_001288155.1;Name=WP_001288155.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=C9E97_RS09795;product=formate hydrogenlyase subunit HycE;protein_id=WP_001288155.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	51749	52291	.	+	.	ID=gene-C9E97_RS09800;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=C9E97_RS09800;old_locus_tag=C9E97_10005
NZ_PYKA01000065.1	Protein Homology	CDS	51749	52291	.	+	0	ID=cds-WP_000493773.1;Parent=gene-C9E97_RS09800;Dbxref=GenBank:WP_000493773.1;Name=WP_000493773.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461769.1;locus_tag=C9E97_RS09800;product=formate hydrogenlyase subunit HycF;protein_id=WP_000493773.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	52291	53058	.	+	.	ID=gene-C9E97_RS09805;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=C9E97_RS09805;old_locus_tag=C9E97_10010
NZ_PYKA01000065.1	Protein Homology	CDS	52291	53058	.	+	0	ID=cds-WP_000067419.1;Parent=gene-C9E97_RS09805;Dbxref=GenBank:WP_000067419.1;Name=WP_000067419.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461768.1;locus_tag=C9E97_RS09805;product=formate hydrogenlyase subunit HycG;protein_id=WP_000067419.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	53055	53465	.	+	.	ID=gene-C9E97_RS09810;Name=C9E97_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09810;old_locus_tag=C9E97_10015
NZ_PYKA01000065.1	Protein Homology	CDS	53055	53465	.	+	0	ID=cds-WP_000003726.1;Parent=gene-C9E97_RS09810;Dbxref=GenBank:WP_000003726.1;Name=WP_000003726.1;Ontology_term=GO:0065003;gbkey=CDS;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461767.1;locus_tag=C9E97_RS09810;product=formate hydrogenlyase maturation HycH family protein;protein_id=WP_000003726.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	53458	53928	.	+	.	ID=gene-C9E97_RS09815;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=C9E97_RS09815;old_locus_tag=C9E97_10020
NZ_PYKA01000065.1	Protein Homology	CDS	53458	53928	.	+	0	ID=cds-WP_000132984.1;Parent=gene-C9E97_RS09815;Dbxref=GenBank:WP_000132984.1;Name=WP_000132984.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461766.1;locus_tag=C9E97_RS09815;product=hydrogenase maturation peptidase HycI;protein_id=WP_000132984.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	53955	54764	.	+	.	ID=gene-C9E97_RS09820;Name=C9E97_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09820;old_locus_tag=C9E97_10025
NZ_PYKA01000065.1	Protein Homology	CDS	53955	54764	.	+	0	ID=cds-WP_135369734.1;Parent=gene-C9E97_RS09820;Dbxref=GenBank:WP_135369734.1;Name=WP_135369734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461765.1;locus_tag=C9E97_RS09820;product=hypothetical protein;protein_id=WP_135369734.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	54965	55510	.	+	.	ID=gene-C9E97_RS09825;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=C9E97_RS09825;old_locus_tag=C9E97_10030
NZ_PYKA01000065.1	Protein Homology	CDS	54965	55510	.	+	0	ID=cds-WP_001078791.1;Parent=gene-C9E97_RS09825;Dbxref=GenBank:WP_001078791.1;Name=WP_001078791.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461764.1;locus_tag=C9E97_RS09825;product=electron transport protein HydN;protein_id=WP_001078791.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	55656	57896	.	+	.	ID=gene-C9E97_RS09830;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=C9E97_RS09830;old_locus_tag=C9E97_10035
NZ_PYKA01000065.1	Protein Homology	CDS	55656	57896	.	+	0	ID=cds-WP_135369733.1;Parent=gene-C9E97_RS09830;Dbxref=GenBank:WP_135369733.1;Name=WP_135369733.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461763.1;locus_tag=C9E97_RS09830;product=carbamoyltransferase HypF;protein_id=WP_135369733.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	57993	59126	.	-	.	ID=gene-C9E97_RS09835;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=C9E97_RS09835;old_locus_tag=C9E97_10040
NZ_PYKA01000065.1	Protein Homology	CDS	57993	59126	.	-	0	ID=cds-WP_000086336.1;Parent=gene-C9E97_RS09835;Dbxref=GenBank:WP_000086336.1;Name=WP_000086336.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461762.1;locus_tag=C9E97_RS09835;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_000086336.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	59123	60562	.	-	.	ID=gene-C9E97_RS09840;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=C9E97_RS09840;old_locus_tag=C9E97_10045
NZ_PYKA01000065.1	Protein Homology	CDS	59123	60562	.	-	0	ID=cds-WP_061380583.1;Parent=gene-C9E97_RS09840;Dbxref=GenBank:WP_061380583.1;Name=WP_061380583.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461761.1;locus_tag=C9E97_RS09840;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_061380583.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	60748	62268	.	+	.	ID=gene-C9E97_RS09845;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=C9E97_RS09845;old_locus_tag=C9E97_10050
NZ_PYKA01000065.1	Protein Homology	CDS	60748	62268	.	+	0	ID=cds-WP_020899131.1;Parent=gene-C9E97_RS09845;Dbxref=GenBank:WP_020899131.1;Name=WP_020899131.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461760.1;locus_tag=C9E97_RS09845;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_020899131.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	62265	63230	.	-	.	ID=gene-C9E97_RS09850;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=C9E97_RS09850;old_locus_tag=C9E97_10055
NZ_PYKA01000065.1	Protein Homology	CDS	62265	63230	.	-	0	ID=cds-WP_001278206.1;Parent=gene-C9E97_RS09850;Dbxref=GenBank:WP_001278206.1;Name=WP_001278206.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=C9E97_RS09850;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_001278206.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	63223	63996	.	-	.	ID=gene-C9E97_RS09855;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=C9E97_RS09855;old_locus_tag=C9E97_10060
NZ_PYKA01000065.1	Protein Homology	CDS	63223	63996	.	-	0	ID=cds-WP_000804536.1;Parent=gene-C9E97_RS09855;Dbxref=GenBank:WP_000804536.1;Name=WP_000804536.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461758.1;locus_tag=C9E97_RS09855;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_000804536.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	64194	64553	.	-	.	ID=gene-C9E97_RS09860;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=C9E97_RS09860;old_locus_tag=C9E97_10065
NZ_PYKA01000065.1	Protein Homology	CDS	64194	64553	.	-	0	ID=cds-WP_000255198.1;Parent=gene-C9E97_RS09860;Dbxref=GenBank:WP_000255198.1;Name=WP_000255198.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461757.1;locus_tag=C9E97_RS09860;product=transcriptional regulator GutM;protein_id=WP_000255198.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	64629	65408	.	-	.	ID=gene-C9E97_RS09865;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=C9E97_RS09865;old_locus_tag=C9E97_10070
NZ_PYKA01000065.1	Protein Homology	CDS	64629	65408	.	-	0	ID=cds-WP_001077372.1;Parent=gene-C9E97_RS09865;Dbxref=GenBank:WP_001077372.1;Name=WP_001077372.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461756.1;locus_tag=C9E97_RS09865;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_001077372.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	65420	65782	.	-	.	ID=gene-C9E97_RS09870;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=C9E97_RS09870;old_locus_tag=C9E97_10075
NZ_PYKA01000065.1	Protein Homology	CDS	65420	65782	.	-	0	ID=cds-WP_000111553.1;Parent=gene-C9E97_RS09870;Dbxref=GenBank:WP_000111553.1;Name=WP_000111553.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461755.1;locus_tag=C9E97_RS09870;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_000111553.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	65794	66765	.	-	.	ID=gene-C9E97_RS09875;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=C9E97_RS09875;old_locus_tag=C9E97_10080
NZ_PYKA01000065.1	Protein Homology	CDS	65794	66765	.	-	0	ID=cds-WP_000199039.1;Parent=gene-C9E97_RS09875;Dbxref=GenBank:WP_000199039.1;Name=WP_000199039.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461754.1;locus_tag=C9E97_RS09875;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_000199039.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	66762	67325	.	-	.	ID=gene-C9E97_RS09880;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=C9E97_RS09880;old_locus_tag=C9E97_10085
NZ_PYKA01000065.1	Protein Homology	CDS	66762	67325	.	-	0	ID=cds-WP_000573335.1;Parent=gene-C9E97_RS09880;Dbxref=GenBank:WP_000573335.1;Name=WP_000573335.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461753.1;locus_tag=C9E97_RS09880;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000573335.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	67578	68657	.	+	.	ID=gene-C9E97_RS09885;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=C9E97_RS09885;old_locus_tag=C9E97_10090
NZ_PYKA01000065.1	Protein Homology	CDS	67578	68657	.	+	0	ID=cds-WP_000476828.1;Parent=gene-C9E97_RS09885;Dbxref=GenBank:WP_000476828.1;Name=WP_000476828.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461752.1;locus_tag=C9E97_RS09885;product=lytic murein transglycosylase B;protein_id=WP_000476828.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	68694	68939	.	-	.	ID=gene-C9E97_RS23720;Name=C9E97_RS23720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23720;old_locus_tag=C9E97_10095
NZ_PYKA01000065.1	Protein Homology	CDS	68694	68939	.	-	0	ID=cds-WP_021000688.1;Parent=gene-C9E97_RS23720;Dbxref=GenBank:WP_021000688.1;Name=WP_021000688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053775.1;locus_tag=C9E97_RS23720;product=hypothetical protein;protein_id=WP_021000688.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	69135	69632	.	+	.	ID=gene-C9E97_RS09895;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=C9E97_RS09895;old_locus_tag=C9E97_10100
NZ_PYKA01000065.1	Protein Homology	CDS	69135	69632	.	+	0	ID=cds-WP_010835022.1;Parent=gene-C9E97_RS09895;Dbxref=GenBank:WP_010835022.1;Name=WP_010835022.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461751.1;locus_tag=C9E97_RS09895;product=nicotinamide-nucleotide amidase;protein_id=WP_010835022.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	69717	70778	.	+	.	ID=gene-C9E97_RS09900;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=C9E97_RS09900;old_locus_tag=C9E97_10105
NZ_PYKA01000065.1	Protein Homology	CDS	69717	70778	.	+	0	ID=cds-WP_000963150.1;Parent=gene-C9E97_RS09900;Dbxref=GenBank:WP_000963150.1;Name=WP_000963150.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461750.1;locus_tag=C9E97_RS09900;product=recombinase RecA;protein_id=WP_000963150.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	70895	71395	.	+	.	ID=gene-C9E97_RS09905;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=C9E97_RS09905;old_locus_tag=C9E97_10110
NZ_PYKA01000065.1	Protein Homology	CDS	70895	71395	.	+	0	ID=cds-WP_001294863.1;Parent=gene-C9E97_RS09905;Dbxref=GenBank:WP_001294863.1;Name=WP_001294863.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461749.1;locus_tag=C9E97_RS09905;product=recombination regulator RecX;protein_id=WP_001294863.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	71631	74261	.	+	.	ID=gene-C9E97_RS09915;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=C9E97_RS09915;old_locus_tag=C9E97_10120
NZ_PYKA01000065.1	Protein Homology	CDS	71631	74261	.	+	0	ID=cds-WP_061380580.1;Parent=gene-C9E97_RS09915;Dbxref=GenBank:WP_061380580.1;Name=WP_061380580.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461748.1;locus_tag=C9E97_RS09915;product=alanine--tRNA ligase;protein_id=WP_061380580.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	74496	74681	.	+	.	ID=gene-C9E97_RS09920;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=C9E97_RS09920;old_locus_tag=C9E97_10125
NZ_PYKA01000065.1	Protein Homology	CDS	74496	74681	.	+	0	ID=cds-WP_000906486.1;Parent=gene-C9E97_RS09920;Dbxref=GenBank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=C9E97_RS09920;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11
NZ_PYKA01000065.1	RefSeq	gene	74985	75077	.	+	.	ID=gene-C9E97_RS09925;Name=C9E97_RS09925;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS09925;old_locus_tag=C9E97_10135
NZ_PYKA01000065.1	tRNAscan-SE	tRNA	74985	75077	.	+	.	ID=rna-C9E97_RS09925;Parent=gene-C9E97_RS09925;anticodon=(pos:75019..75021);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS09925;product=tRNA-Ser
NZ_PYKA01000065.1	tRNAscan-SE	exon	74985	75077	.	+	.	ID=exon-C9E97_RS09925-1;Parent=rna-C9E97_RS09925;anticodon=(pos:75019..75021);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS09925;product=tRNA-Ser
NZ_PYKA01000065.1	RefSeq	gene	75081	75157	.	+	.	ID=gene-C9E97_RS09930;Name=C9E97_RS09930;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS09930;old_locus_tag=C9E97_10140
NZ_PYKA01000065.1	tRNAscan-SE	tRNA	75081	75157	.	+	.	ID=rna-C9E97_RS09930;Parent=gene-C9E97_RS09930;anticodon=(pos:75115..75117);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS09930;product=tRNA-Arg
NZ_PYKA01000065.1	tRNAscan-SE	exon	75081	75157	.	+	.	ID=exon-C9E97_RS09930-1;Parent=rna-C9E97_RS09930;anticodon=(pos:75115..75117);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS09930;product=tRNA-Arg
NZ_PYKA01000065.1	RefSeq	gene	75219	75295	.	+	.	ID=gene-C9E97_RS09935;Name=C9E97_RS09935;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS09935;old_locus_tag=C9E97_10145
NZ_PYKA01000065.1	tRNAscan-SE	tRNA	75219	75295	.	+	.	ID=rna-C9E97_RS09935;Parent=gene-C9E97_RS09935;anticodon=(pos:75253..75255);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS09935;product=tRNA-Arg
NZ_PYKA01000065.1	tRNAscan-SE	exon	75219	75295	.	+	.	ID=exon-C9E97_RS09935-1;Parent=rna-C9E97_RS09935;anticodon=(pos:75253..75255);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS09935;product=tRNA-Arg
##sequence-region NZ_PYKA01000112.1 1 73706
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000112.1	RefSeq	region	1	73706	.	+	.	ID=NZ_PYKA01000112.1:1..73706;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000112.1	RefSeq	gene	181	1941	.	-	.	ID=gene-C9E97_RS16425;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=C9E97_RS16425;old_locus_tag=C9E97_16790
NZ_PYKA01000112.1	Protein Homology	CDS	181	1941	.	-	0	ID=cds-WP_135369410.1;Parent=gene-C9E97_RS16425;Dbxref=GenBank:WP_135369410.1;Name=WP_135369410.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=C9E97_RS16425;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_135369410.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	2078	2770	.	+	.	ID=gene-C9E97_RS16430;Name=C9E97_RS16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16430;old_locus_tag=C9E97_16795
NZ_PYKA01000112.1	Protein Homology	CDS	2078	2770	.	+	0	ID=cds-WP_000642866.1;Parent=gene-C9E97_RS16430;Dbxref=GenBank:WP_000642866.1;Name=WP_000642866.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459951.1;locus_tag=C9E97_RS16430;product=DUF421 domain-containing protein;protein_id=WP_000642866.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	2956	4044	.	+	.	ID=gene-C9E97_RS16435;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=C9E97_RS16435;old_locus_tag=C9E97_16800
NZ_PYKA01000112.1	Protein Homology	CDS	2956	4044	.	+	0	ID=cds-WP_024797293.1;Parent=gene-C9E97_RS16435;Dbxref=GenBank:WP_024797293.1;Name=WP_024797293.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459952.1;locus_tag=C9E97_RS16435;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_024797293.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	4115	5398	.	+	.	ID=gene-C9E97_RS16440;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=C9E97_RS16440;old_locus_tag=C9E97_16805
NZ_PYKA01000112.1	Protein Homology	CDS	4115	5398	.	+	0	ID=cds-WP_135369411.1;Parent=gene-C9E97_RS16440;Dbxref=GenBank:WP_135369411.1;Name=WP_135369411.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459953.1;locus_tag=C9E97_RS16440;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_135369411.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	5541	6302	.	+	.	ID=gene-C9E97_RS16445;Name=C9E97_RS16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16445;old_locus_tag=C9E97_16810
NZ_PYKA01000112.1	Protein Homology	CDS	5541	6302	.	+	0	ID=cds-WP_135369650.1;Parent=gene-C9E97_RS16445;Dbxref=GenBank:WP_135369650.1;Name=WP_135369650.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459954.1;locus_tag=C9E97_RS16445;product=M48 family metallopeptidase;protein_id=WP_135369650.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	6475	7158	.	+	.	ID=gene-C9E97_RS16450;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=C9E97_RS16450;old_locus_tag=C9E97_16815
NZ_PYKA01000112.1	Protein Homology	CDS	6475	7158	.	+	0	ID=cds-WP_000125007.1;Parent=gene-C9E97_RS16450;Dbxref=GenBank:WP_000125007.1;Name=WP_000125007.1;Ontology_term=GO:0015949,GO:0004127,GO:0005524;gbkey=CDS;gene=cmk;go_function=(d)CMP kinase activity|0004127||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=C9E97_RS16450;product=(d)CMP kinase;protein_id=WP_000125007.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	7272	8945	.	+	.	ID=gene-C9E97_RS16455;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=C9E97_RS16455;old_locus_tag=C9E97_16820
NZ_PYKA01000112.1	Protein Homology	CDS	7272	8945	.	+	0	ID=cds-WP_000140324.1;Parent=gene-C9E97_RS16455;Dbxref=GenBank:WP_000140324.1;Name=WP_000140324.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=C9E97_RS16455;product=30S ribosomal protein S1;protein_id=WP_000140324.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	9101	9385	.	+	.	ID=gene-C9E97_RS16460;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=C9E97_RS16460;old_locus_tag=C9E97_16825
NZ_PYKA01000112.1	Protein Homology	CDS	9101	9385	.	+	0	ID=cds-WP_000167332.1;Parent=gene-C9E97_RS16460;Dbxref=GenBank:WP_000167332.1;Name=WP_000167332.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=C9E97_RS16460;product=integration host factor subunit beta;protein_id=WP_000167332.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	9615	11879	.	+	.	ID=gene-C9E97_RS16465;Name=C9E97_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16465;old_locus_tag=C9E97_16830
NZ_PYKA01000112.1	Protein Homology	CDS	9615	11879	.	+	0	ID=cds-WP_135369651.1;Parent=gene-C9E97_RS16465;Dbxref=GenBank:WP_135369651.1;Name=WP_135369651.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459958.1;locus_tag=C9E97_RS16465;product=ComEC family protein;protein_id=WP_135369651.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	11916	13664	.	+	.	ID=gene-C9E97_RS16470;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=C9E97_RS16470;old_locus_tag=C9E97_16835
NZ_PYKA01000112.1	Protein Homology	CDS	11916	13664	.	+	0	ID=cds-WP_000551246.1;Parent=gene-C9E97_RS16470;Dbxref=GenBank:WP_000551246.1;Name=WP_000551246.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459959.1;locus_tag=C9E97_RS16470;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_000551246.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	13661	14638	.	+	.	ID=gene-C9E97_RS16475;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=C9E97_RS16475;old_locus_tag=C9E97_16840
NZ_PYKA01000112.1	Protein Homology	CDS	13661	14638	.	+	0	ID=cds-WP_023243866.1;Parent=gene-C9E97_RS16475;Dbxref=GenBank:WP_023243866.1;Name=WP_023243866.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459960.1;locus_tag=C9E97_RS16475;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_023243866.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	14682	15914	.	+	.	ID=gene-C9E97_RS16480;Name=C9E97_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16480;old_locus_tag=C9E97_16845
NZ_PYKA01000112.1	Protein Homology	CDS	14682	15914	.	+	0	ID=cds-WP_135369652.1;Parent=gene-C9E97_RS16480;Dbxref=GenBank:WP_135369652.1;Name=WP_135369652.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459961.1;locus_tag=C9E97_RS16480;product=winged helix-turn-helix domain-containing protein;protein_id=WP_135369652.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	15966	16148	.	+	.	ID=gene-C9E97_RS16485;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=C9E97_RS16485;old_locus_tag=C9E97_16850
NZ_PYKA01000112.1	Protein Homology	CDS	15966	16148	.	+	0	ID=cds-WP_000350061.1;Parent=gene-C9E97_RS16485;Dbxref=GenBank:WP_000350061.1;Name=WP_000350061.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459962.1;locus_tag=C9E97_RS16485;product=protein YcaR;protein_id=WP_000350061.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	16145	16891	.	+	.	ID=gene-C9E97_RS16490;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=C9E97_RS16490;old_locus_tag=C9E97_16855
NZ_PYKA01000112.1	Protein Homology	CDS	16145	16891	.	+	0	ID=cds-WP_079841760.1;Parent=gene-C9E97_RS16490;Dbxref=GenBank:WP_079841760.1;Name=WP_079841760.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459963.1;locus_tag=C9E97_RS16490;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_079841760.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	17102	17995	.	+	.	ID=gene-C9E97_RS16500;Name=C9E97_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16500;old_locus_tag=C9E97_16860
NZ_PYKA01000112.1	Protein Homology	CDS	17102	17995	.	+	0	ID=cds-WP_000436894.1;Parent=gene-C9E97_RS16500;Dbxref=GenBank:WP_000436894.1;Name=WP_000436894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459964.1;locus_tag=C9E97_RS16500;product=YcbJ family phosphotransferase;protein_id=WP_000436894.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	17975	18751	.	-	.	ID=gene-C9E97_RS16505;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=C9E97_RS16505;old_locus_tag=C9E97_16865
NZ_PYKA01000112.1	Protein Homology	CDS	17975	18751	.	-	0	ID=cds-WP_000899554.1;Parent=gene-C9E97_RS16505;Dbxref=GenBank:WP_000899554.1;Name=WP_000899554.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459965.1;locus_tag=C9E97_RS16505;product=envelope biogenesis factor ElyC;protein_id=WP_000899554.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	18887	19690	.	+	.	ID=gene-C9E97_RS16510;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=C9E97_RS16510;old_locus_tag=C9E97_16870
NZ_PYKA01000112.1	Protein Homology	CDS	18887	19690	.	+	0	ID=cds-WP_001154025.1;Parent=gene-C9E97_RS16510;Dbxref=GenBank:WP_001154025.1;Name=WP_001154025.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459966.1;locus_tag=C9E97_RS16510;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_001154025.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	19683	21005	.	+	.	ID=gene-C9E97_RS16515;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=C9E97_RS16515;old_locus_tag=C9E97_16875
NZ_PYKA01000112.1	Protein Homology	CDS	19683	21005	.	+	0	ID=cds-WP_001288828.1;Parent=gene-C9E97_RS16515;Dbxref=GenBank:WP_001288828.1;Name=WP_001288828.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=C9E97_RS16515;product=chromosome partition protein MukF;protein_id=WP_001288828.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	20986	21690	.	+	.	ID=gene-C9E97_RS16520;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=C9E97_RS16520;old_locus_tag=C9E97_16880
NZ_PYKA01000112.1	Protein Homology	CDS	20986	21690	.	+	0	ID=cds-WP_000060025.1;Parent=gene-C9E97_RS16520;Dbxref=GenBank:WP_000060025.1;Name=WP_000060025.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=C9E97_RS16520;product=chromosome partition protein MukE;protein_id=WP_000060025.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	21690	26156	.	+	.	ID=gene-C9E97_RS16525;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=C9E97_RS16525;old_locus_tag=C9E97_16885
NZ_PYKA01000112.1	Protein Homology	CDS	21690	26156	.	+	0	ID=cds-WP_000572733.1;Parent=gene-C9E97_RS16525;Dbxref=GenBank:WP_000572733.1;Name=WP_000572733.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459969.1;locus_tag=C9E97_RS16525;product=chromosome partition protein MukB;protein_id=WP_000572733.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	26501	28348	.	+	.	ID=gene-C9E97_RS16530;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=C9E97_RS16530;old_locus_tag=C9E97_16890
NZ_PYKA01000112.1	Protein Homology	CDS	26501	28348	.	+	0	ID=cds-WP_135369653.1;Parent=gene-C9E97_RS16530;Dbxref=GenBank:WP_135369653.1;Name=WP_135369653.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459970.1;locus_tag=C9E97_RS16530;product=L%2CD-transpeptidase;protein_id=WP_135369653.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	28608	29156	.	+	.	ID=gene-C9E97_RS16535;Name=C9E97_RS16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16535;old_locus_tag=C9E97_16900
NZ_PYKA01000112.1	Protein Homology	CDS	28608	29156	.	+	0	ID=cds-WP_001748323.1;Parent=gene-C9E97_RS16535;Dbxref=GenBank:WP_001748323.1;Name=WP_001748323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459971.1;locus_tag=C9E97_RS16535;product=YcbK family protein;protein_id=WP_001748323.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	29184	29831	.	+	.	ID=gene-C9E97_RS16540;Name=C9E97_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16540;old_locus_tag=C9E97_16905
NZ_PYKA01000112.1	Protein Homology	CDS	29184	29831	.	+	0	ID=cds-WP_001109471.1;Parent=gene-C9E97_RS16540;Dbxref=GenBank:WP_001109471.1;Name=WP_001109471.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=C9E97_RS16540;product=MBL fold metallo-hydrolase;protein_id=WP_001109471.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	29893	31083	.	-	.	ID=gene-C9E97_RS16545;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=C9E97_RS16545;old_locus_tag=C9E97_16910
NZ_PYKA01000112.1	Protein Homology	CDS	29893	31083	.	-	0	ID=cds-WP_000462653.1;Parent=gene-C9E97_RS16545;Dbxref=GenBank:WP_000462653.1;Name=WP_000462653.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=C9E97_RS16545;product=aspartate transaminase;protein_id=WP_000462653.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	31268	32359	.	-	.	ID=gene-C9E97_RS16550;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=C9E97_RS16550;old_locus_tag=C9E97_16915
NZ_PYKA01000112.1	Protein Homology	CDS	31268	32359	.	-	0	ID=cds-WP_000977709.1;Parent=gene-C9E97_RS16550;Dbxref=GenBank:WP_000977709.1;Name=WP_000977709.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459974.1;locus_tag=C9E97_RS16550;product=porin OmpF;protein_id=WP_000977709.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	32965	34365	.	-	.	ID=gene-C9E97_RS16555;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=C9E97_RS16555;old_locus_tag=C9E97_16920
NZ_PYKA01000112.1	Protein Homology	CDS	32965	34365	.	-	0	ID=cds-WP_000117870.1;Parent=gene-C9E97_RS16555;Dbxref=GenBank:WP_000117870.1;Name=WP_000117870.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=C9E97_RS16555;product=asparagine--tRNA ligase;protein_id=WP_000117870.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	34566	35027	.	-	.	ID=gene-C9E97_RS16560;Name=C9E97_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16560;old_locus_tag=C9E97_16925
NZ_PYKA01000112.1	Protein Homology	CDS	34566	35027	.	-	0	ID=cds-WP_000762342.1;Parent=gene-C9E97_RS16560;Dbxref=GenBank:WP_000762342.1;Name=WP_000762342.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459976.1;locus_tag=C9E97_RS16560;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_000762342.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	35344	36558	.	+	.	ID=gene-C9E97_RS16570;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=C9E97_RS16570;old_locus_tag=C9E97_16935
NZ_PYKA01000112.1	Protein Homology	CDS	35344	36558	.	+	0	ID=cds-WP_000544848.1;Parent=gene-C9E97_RS16570;Dbxref=GenBank:WP_000544848.1;Name=WP_000544848.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459977.1;locus_tag=C9E97_RS16570;product=diaminopropionate ammonia-lyase;protein_id=WP_000544848.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	36804	38237	.	+	.	ID=gene-C9E97_RS16575;Name=C9E97_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16575;old_locus_tag=C9E97_16940
NZ_PYKA01000112.1	Protein Homology	CDS	36804	38237	.	+	0	ID=cds-WP_000893197.1;Parent=gene-C9E97_RS16575;Dbxref=GenBank:WP_000893197.1;Name=WP_000893197.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524705.1;locus_tag=C9E97_RS16575;product=alanine/glycine:cation symporter family protein;protein_id=WP_000893197.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	38318	39520	.	-	.	ID=gene-C9E97_RS16580;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=C9E97_RS16580;old_locus_tag=C9E97_16945
NZ_PYKA01000112.1	Protein Homology	CDS	38318	39520	.	-	0	ID=cds-WP_000191404.1;Parent=gene-C9E97_RS16580;Dbxref=GenBank:WP_000191404.1;Name=WP_000191404.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459979.1;locus_tag=C9E97_RS16580;product=nicotinate phosphoribosyltransferase;protein_id=WP_000191404.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	39787	42399	.	+	.	ID=gene-C9E97_RS16585;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=C9E97_RS16585;old_locus_tag=C9E97_16950
NZ_PYKA01000112.1	Protein Homology	CDS	39787	42399	.	+	0	ID=cds-WP_135369160.1;Parent=gene-C9E97_RS16585;Dbxref=GenBank:WP_135369160.1;Name=WP_135369160.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=C9E97_RS16585;product=aminopeptidase N;protein_id=WP_135369160.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	42607	43617	.	+	.	ID=gene-C9E97_RS16590;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=C9E97_RS16590;old_locus_tag=C9E97_16955
NZ_PYKA01000112.1	Protein Homology	CDS	42607	43617	.	+	0	ID=cds-WP_000291723.1;Parent=gene-C9E97_RS16590;Dbxref=GenBank:WP_000291723.1;Name=WP_000291723.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460032.1;locus_tag=C9E97_RS16590;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_000291723.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	43783	44325	.	+	.	ID=gene-C9E97_RS16595;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=C9E97_RS16595;old_locus_tag=C9E97_16960
NZ_PYKA01000112.1	Protein Homology	CDS	43783	44325	.	+	0	ID=cds-WP_135369159.1;Parent=gene-C9E97_RS16595;Dbxref=GenBank:WP_135369159.1;Name=WP_135369159.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460033.1;locus_tag=C9E97_RS16595;product=cell division protein ZapC;protein_id=WP_135369159.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	44322	45431	.	-	.	ID=gene-C9E97_RS16600;Name=C9E97_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16600;old_locus_tag=C9E97_16965
NZ_PYKA01000112.1	Protein Homology	CDS	44322	45431	.	-	0	ID=cds-WP_000224073.1;Parent=gene-C9E97_RS16600;Dbxref=GenBank:WP_000224073.1;Name=WP_000224073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460034.1;locus_tag=C9E97_RS16600;product=YcbX family protein;protein_id=WP_000224073.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	45530	47638	.	+	.	ID=gene-C9E97_RS16605;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=C9E97_RS16605;old_locus_tag=C9E97_16970
NZ_PYKA01000112.1	Protein Homology	CDS	45530	47638	.	+	0	ID=cds-WP_001086481.1;Parent=gene-C9E97_RS16605;Dbxref=GenBank:WP_001086481.1;Name=WP_001086481.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460035.1;locus_tag=C9E97_RS16605;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_001086481.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	47651	49558	.	+	.	ID=gene-C9E97_RS16610;Name=C9E97_RS16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16610;old_locus_tag=C9E97_16975
NZ_PYKA01000112.1	Protein Homology	CDS	47651	49558	.	+	0	ID=cds-WP_000053044.1;Parent=gene-C9E97_RS16610;Dbxref=GenBank:WP_000053044.1;Name=WP_000053044.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=C9E97_RS16610;product=ABC transporter ATP-binding protein;protein_id=WP_000053044.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	49573	50826	.	+	.	ID=gene-C9E97_RS16615;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=C9E97_RS16615;old_locus_tag=C9E97_16980
NZ_PYKA01000112.1	Protein Homology	CDS	49573	50826	.	+	0	ID=cds-WP_000333152.1;Parent=gene-C9E97_RS16615;Dbxref=GenBank:WP_000333152.1;Name=WP_000333152.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460037.1;locus_tag=C9E97_RS16615;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_000333152.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	50831	52471	.	+	.	ID=gene-C9E97_RS16620;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=C9E97_RS16620;old_locus_tag=C9E97_16985
NZ_PYKA01000112.1	Protein Homology	CDS	50831	52471	.	+	0	ID=cds-WP_000433414.1;Parent=gene-C9E97_RS16620;Dbxref=GenBank:WP_000433414.1;Name=WP_000433414.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460038.1;locus_tag=C9E97_RS16620;product=intermembrane transport protein PqiB;protein_id=WP_000433414.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	52468	53031	.	+	.	ID=gene-C9E97_RS16625;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=C9E97_RS16625;old_locus_tag=C9E97_16990
NZ_PYKA01000112.1	Protein Homology	CDS	52468	53031	.	+	0	ID=cds-WP_000759136.1;Parent=gene-C9E97_RS16625;Dbxref=GenBank:WP_000759136.1;Name=WP_000759136.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460039.1;locus_tag=C9E97_RS16625;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_000759136.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	53287	53454	.	+	.	ID=gene-C9E97_RS16630;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=C9E97_RS16630;old_locus_tag=C9E97_16995
NZ_PYKA01000112.1	Protein Homology	CDS	53287	53454	.	+	0	ID=cds-WP_001537784.1;Parent=gene-C9E97_RS16630;Dbxref=GenBank:WP_001537784.1;Name=WP_001537784.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=C9E97_RS16630;product=ribosome modulation factor;protein_id=WP_001537784.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	53554	54072	.	-	.	ID=gene-C9E97_RS16635;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=C9E97_RS16635;old_locus_tag=C9E97_17000
NZ_PYKA01000112.1	Protein Homology	CDS	53554	54072	.	-	0	ID=cds-WP_000227928.1;Parent=gene-C9E97_RS16635;Dbxref=GenBank:WP_000227928.1;Name=WP_000227928.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=C9E97_RS16635;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_000227928.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	54141	55901	.	-	.	ID=gene-C9E97_RS16640;Name=C9E97_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16640;old_locus_tag=C9E97_17005
NZ_PYKA01000112.1	Protein Homology	CDS	54141	55901	.	-	0	ID=cds-WP_000156448.1;Parent=gene-C9E97_RS16640;Dbxref=GenBank:WP_000156448.1;Name=WP_000156448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460042.1;locus_tag=C9E97_RS16640;product=AAA family ATPase;protein_id=WP_000156448.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	56087	56539	.	+	.	ID=gene-C9E97_RS16645;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=C9E97_RS16645;old_locus_tag=C9E97_17010
NZ_PYKA01000112.1	Protein Homology	CDS	56087	56539	.	+	0	ID=cds-WP_000877172.1;Parent=gene-C9E97_RS16645;Dbxref=GenBank:WP_000877172.1;Name=WP_000877172.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460043.1;locus_tag=C9E97_RS16645;product=macrodomain Ter protein MatP;protein_id=WP_000877172.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	56611	57663	.	-	.	ID=gene-C9E97_RS16650;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=C9E97_RS16650;old_locus_tag=C9E97_17015
NZ_PYKA01000112.1	Protein Homology	CDS	56611	57663	.	-	0	ID=cds-WP_001670727.1;Parent=gene-C9E97_RS16650;Dbxref=GenBank:WP_001670727.1;Name=WP_001670727.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460044.1;locus_tag=C9E97_RS16650;product=porin OmpA;protein_id=WP_001670727.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	58020	58529	.	-	.	ID=gene-C9E97_RS16655;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=C9E97_RS16655;old_locus_tag=C9E97_17020
NZ_PYKA01000112.1	Protein Homology	CDS	58020	58529	.	-	0	ID=cds-WP_000288732.1;Parent=gene-C9E97_RS16655;Dbxref=GenBank:WP_000288732.1;Name=WP_000288732.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460045.1;locus_tag=C9E97_RS16655;product=SOS-induced cell division inhibitor SulA;protein_id=WP_000288732.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	58746	59351	.	+	.	ID=gene-C9E97_RS16660;Name=C9E97_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16660;old_locus_tag=C9E97_17025
NZ_PYKA01000112.1	Protein Homology	CDS	58746	59351	.	+	0	ID=cds-WP_001202375.1;Parent=gene-C9E97_RS16660;Dbxref=GenBank:WP_001202375.1;Name=WP_001202375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460046.1;locus_tag=C9E97_RS16660;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_001202375.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	59338	61491	.	-	.	ID=gene-C9E97_RS16665;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=C9E97_RS16665;old_locus_tag=C9E97_17030
NZ_PYKA01000112.1	Protein Homology	CDS	59338	61491	.	-	0	ID=cds-WP_000950876.1;Parent=gene-C9E97_RS16665;Dbxref=GenBank:WP_000950876.1;Name=WP_000950876.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460047.1;locus_tag=C9E97_RS16665;product=YccS family putative transporter;protein_id=WP_000950876.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	61510	61956	.	-	.	ID=gene-C9E97_RS16670;Name=C9E97_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16670;old_locus_tag=C9E97_17035
NZ_PYKA01000112.1	Protein Homology	CDS	61510	61956	.	-	0	ID=cds-WP_001261222.1;Parent=gene-C9E97_RS16670;Dbxref=GenBank:WP_001261222.1;Name=WP_001261222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460048.1;locus_tag=C9E97_RS16670;product=YccF domain-containing protein;protein_id=WP_001261222.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	62080	64134	.	+	.	ID=gene-C9E97_RS16675;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=C9E97_RS16675;old_locus_tag=C9E97_17040
NZ_PYKA01000112.1	Protein Homology	CDS	62080	64134	.	+	0	ID=cds-WP_135369158.1;Parent=gene-C9E97_RS16675;Dbxref=GenBank:WP_135369158.1;Name=WP_135369158.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460049.1;locus_tag=C9E97_RS16675;product=DNA helicase IV;protein_id=WP_135369158.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	64170	64628	.	-	.	ID=gene-C9E97_RS16680;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=C9E97_RS16680;old_locus_tag=C9E97_17045
NZ_PYKA01000112.1	Protein Homology	CDS	64170	64628	.	-	0	ID=cds-WP_000424187.1;Parent=gene-C9E97_RS16680;Dbxref=GenBank:WP_000424187.1;Name=WP_000424187.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460050.1;locus_tag=C9E97_RS16680;product=methylglyoxal synthase;protein_id=WP_000424187.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	64723	65385	.	-	.	ID=gene-C9E97_RS16685;Name=C9E97_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16685;old_locus_tag=C9E97_17050
NZ_PYKA01000112.1	Protein Homology	CDS	64723	65385	.	-	0	ID=cds-WP_000847719.1;Parent=gene-C9E97_RS16685;Dbxref=GenBank:WP_000847719.1;Name=WP_000847719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460051.1;locus_tag=C9E97_RS16685;product=DUF2057 family protein;protein_id=WP_000847719.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	65559	65972	.	+	.	ID=gene-C9E97_RS16690;Name=C9E97_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16690;old_locus_tag=C9E97_17055
NZ_PYKA01000112.1	Protein Homology	CDS	65559	65972	.	+	0	ID=cds-WP_001537782.1;Parent=gene-C9E97_RS16690;Dbxref=GenBank:WP_001537782.1;Name=WP_001537782.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=C9E97_RS16690;product=CoA-binding protein;protein_id=WP_001537782.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	66017	66334	.	-	.	ID=gene-C9E97_RS16695;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=C9E97_RS16695;old_locus_tag=C9E97_17060
NZ_PYKA01000112.1	Protein Homology	CDS	66017	66334	.	-	0	ID=cds-WP_000561983.1;Parent=gene-C9E97_RS16695;Dbxref=GenBank:WP_000561983.1;Name=WP_000561983.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=C9E97_RS16695;product=heat shock protein HspQ;protein_id=WP_000561983.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	66392	67603	.	-	.	ID=gene-C9E97_RS16700;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=C9E97_RS16700;old_locus_tag=C9E97_17065
NZ_PYKA01000112.1	Protein Homology	CDS	66392	67603	.	-	0	ID=cds-WP_135369157.1;Parent=gene-C9E97_RS16700;Dbxref=GenBank:WP_135369157.1;Name=WP_135369157.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=C9E97_RS16700;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_135369157.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	67818	68366	.	+	.	ID=gene-C9E97_RS16705;Name=C9E97_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16705;old_locus_tag=C9E97_17070
NZ_PYKA01000112.1	Protein Homology	CDS	67818	68366	.	+	0	ID=cds-WP_000859416.1;Parent=gene-C9E97_RS16705;Dbxref=GenBank:WP_000859416.1;Name=WP_000859416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460055.1;locus_tag=C9E97_RS16705;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_000859416.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	68392	69171	.	+	.	ID=gene-C9E97_RS16710;Name=C9E97_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16710;old_locus_tag=C9E97_17075
NZ_PYKA01000112.1	Protein Homology	CDS	68392	69171	.	+	0	ID=cds-WP_135369156.1;Parent=gene-C9E97_RS16710;Dbxref=GenBank:WP_135369156.1;Name=WP_135369156.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=C9E97_RS16710;product=helix-turn-helix transcriptional regulator;protein_id=WP_135369156.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	69220	69501	.	+	.	ID=gene-C9E97_RS16715;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=C9E97_RS16715;old_locus_tag=C9E97_17080
NZ_PYKA01000112.1	Protein Homology	CDS	69220	69501	.	+	0	ID=cds-WP_135369155.1;Parent=gene-C9E97_RS16715;Dbxref=GenBank:WP_135369155.1;Name=WP_135369155.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460057.1;locus_tag=C9E97_RS16715;product=acylphosphatase;protein_id=WP_135369155.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	69498	69827	.	-	.	ID=gene-C9E97_RS16720;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=C9E97_RS16720;old_locus_tag=C9E97_17085
NZ_PYKA01000112.1	Protein Homology	CDS	69498	69827	.	-	0	ID=cds-WP_000904446.1;Parent=gene-C9E97_RS16720;Dbxref=GenBank:WP_000904446.1;Name=WP_000904446.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460058.1;locus_tag=C9E97_RS16720;product=sulfurtransferase TusE;protein_id=WP_000904446.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	69914	70573	.	-	.	ID=gene-C9E97_RS16725;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=C9E97_RS16725;old_locus_tag=C9E97_17090
NZ_PYKA01000112.1	Protein Homology	CDS	69914	70573	.	-	0	ID=cds-WP_000374046.1;Parent=gene-C9E97_RS16725;Dbxref=GenBank:WP_000374046.1;Name=WP_000374046.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=C9E97_RS16725;product=FtsH protease modulator YccA;protein_id=WP_000374046.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	70968	71055	.	+	.	ID=gene-C9E97_RS16730;Name=C9E97_RS16730;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS16730;old_locus_tag=C9E97_17095
NZ_PYKA01000112.1	tRNAscan-SE	tRNA	70968	71055	.	+	.	ID=rna-C9E97_RS16730;Parent=gene-C9E97_RS16730;anticodon=(pos:71002..71004);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS16730;product=tRNA-Ser
NZ_PYKA01000112.1	tRNAscan-SE	exon	70968	71055	.	+	.	ID=exon-C9E97_RS16730-1;Parent=rna-C9E97_RS16730;anticodon=(pos:71002..71004);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS16730;product=tRNA-Ser
NZ_PYKA01000112.1	RefSeq	gene	71192	71872	.	-	.	ID=gene-C9E97_RS16735;Name=pipA;gbkey=Gene;gene=pipA;gene_biotype=protein_coding;locus_tag=C9E97_RS16735;old_locus_tag=C9E97_17100
NZ_PYKA01000112.1	Protein Homology	CDS	71192	71872	.	-	0	ID=cds-WP_000938180.1;Parent=gene-C9E97_RS16735;Dbxref=GenBank:WP_000938180.1;Name=WP_000938180.1;gbkey=CDS;gene=pipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460060.1;locus_tag=C9E97_RS16735;product=type III secretion system effector protease PipA;protein_id=WP_000938180.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	72095	72970	.	-	.	ID=gene-C9E97_RS16740;Name=pipB;gbkey=Gene;gene=pipB;gene_biotype=protein_coding;locus_tag=C9E97_RS16740;old_locus_tag=C9E97_17105
NZ_PYKA01000112.1	Protein Homology	CDS	72095	72970	.	-	0	ID=cds-WP_001587007.1;Parent=gene-C9E97_RS16740;Dbxref=GenBank:WP_001587007.1;Name=WP_001587007.1;gbkey=CDS;gene=pipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460061.1;locus_tag=C9E97_RS16740;product=SPI-2 type III secretion system effector PipB;protein_id=WP_001587007.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	gene	73361	73585	.	-	.	ID=gene-C9E97_RS24085;Name=C9E97_RS24085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS24085
NZ_PYKA01000112.1	Protein Homology	CDS	73361	73585	.	-	0	ID=cds-WP_135369342.1;Parent=gene-C9E97_RS24085;Dbxref=GenBank:WP_135369342.1;Name=WP_135369342.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026627.6;locus_tag=C9E97_RS24085;product=PagK family vesicle-borne virulence factor;protein_id=WP_135369342.1;transl_table=11
NZ_PYKA01000112.1	RefSeq	pseudogene	73621	73706	.	+	.	ID=gene-C9E97_RS23860;Name=C9E97_RS23860;end_range=73706,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23860;partial=true;pseudo=true
NZ_PYKA01000112.1	Protein Homology	CDS	73621	73706	.	+	0	ID=cds-C9E97_RS23860;Parent=gene-C9E97_RS23860;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=73706,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=C9E97_RS23860;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKA01000118.1 1 73618
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000118.1	RefSeq	region	1	73618	.	+	.	ID=NZ_PYKA01000118.1:1..73618;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000118.1	RefSeq	pseudogene	1	140	.	-	.	ID=gene-C9E97_RS23520;Name=C9E97_RS23520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23520;partial=true;pseudo=true;start_range=.,1
NZ_PYKA01000118.1	Protein Homology	CDS	1	140	.	-	0	ID=cds-C9E97_RS23520;Parent=gene-C9E97_RS23520;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=C9E97_RS23520;partial=true;product=aldehyde dehydrogenase family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	617	1264	.	+	.	ID=gene-C9E97_RS18325;Name=C9E97_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18325;old_locus_tag=C9E97_18725
NZ_PYKA01000118.1	Protein Homology	CDS	617	1264	.	+	0	ID=cds-WP_000615840.1;Parent=gene-C9E97_RS18325;Dbxref=GenBank:WP_000615840.1;Name=WP_000615840.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460707.1;locus_tag=C9E97_RS18325;product=YchE family NAAT transporter;protein_id=WP_000615840.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	2028	3659	.	+	.	ID=gene-C9E97_RS18335;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=C9E97_RS18335;old_locus_tag=C9E97_18735
NZ_PYKA01000118.1	Protein Homology	CDS	2028	3659	.	+	0	ID=cds-WP_001521098.1;Parent=gene-C9E97_RS18335;Dbxref=GenBank:WP_001521098.1;Name=WP_001521098.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001672805.1;locus_tag=C9E97_RS18335;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_001521098.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	3781	4701	.	+	.	ID=gene-C9E97_RS18340;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=C9E97_RS18340;old_locus_tag=C9E97_18740
NZ_PYKA01000118.1	Protein Homology	CDS	3781	4701	.	+	0	ID=cds-WP_000911097.1;Parent=gene-C9E97_RS18340;Dbxref=GenBank:WP_000911097.1;Name=WP_000911097.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=C9E97_RS18340;product=oligopeptide ABC transporter permease OppB;protein_id=WP_000911097.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	4716	5624	.	+	.	ID=gene-C9E97_RS18345;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=C9E97_RS18345;old_locus_tag=C9E97_18745
NZ_PYKA01000118.1	Protein Homology	CDS	4716	5624	.	+	0	ID=cds-WP_000979653.1;Parent=gene-C9E97_RS18345;Dbxref=GenBank:WP_000979653.1;Name=WP_000979653.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=C9E97_RS18345;product=oligopeptide ABC transporter permease OppC;protein_id=WP_000979653.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	5636	6643	.	+	.	ID=gene-C9E97_RS18350;Name=C9E97_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18350;old_locus_tag=C9E97_18750
NZ_PYKA01000118.1	Protein Homology	CDS	5636	6643	.	+	0	ID=cds-WP_000058857.1;Parent=gene-C9E97_RS18350;Dbxref=GenBank:WP_000058857.1;Name=WP_000058857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460702.1;locus_tag=C9E97_RS18350;product=ABC transporter ATP-binding protein;protein_id=WP_000058857.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	6640	7644	.	+	.	ID=gene-C9E97_RS18355;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=C9E97_RS18355;old_locus_tag=C9E97_18755
NZ_PYKA01000118.1	Protein Homology	CDS	6640	7644	.	+	0	ID=cds-WP_000994699.1;Parent=gene-C9E97_RS18355;Dbxref=GenBank:WP_000994699.1;Name=WP_000994699.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=C9E97_RS18355;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_000994699.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	7692	8528	.	+	.	ID=gene-C9E97_RS18360;Name=C9E97_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18360;old_locus_tag=C9E97_18760
NZ_PYKA01000118.1	Protein Homology	CDS	7692	8528	.	+	0	ID=cds-WP_000059071.1;Parent=gene-C9E97_RS18360;Dbxref=GenBank:WP_000059071.1;Name=WP_000059071.1;Ontology_term=GO:0006811,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460700.1;locus_tag=C9E97_RS18360;product=ion transporter;protein_id=WP_000059071.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	8576	8905	.	-	.	ID=gene-C9E97_RS18365;Name=C9E97_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18365;old_locus_tag=C9E97_18765
NZ_PYKA01000118.1	Protein Homology	CDS	8576	8905	.	-	0	ID=cds-WP_000425070.1;Parent=gene-C9E97_RS18365;Dbxref=GenBank:WP_000425070.1;Name=WP_000425070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448158.1;locus_tag=C9E97_RS18365;product=HI1450 family dsDNA-mimic protein;protein_id=WP_000425070.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	8939	10399	.	-	.	ID=gene-C9E97_RS18370;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=C9E97_RS18370;old_locus_tag=C9E97_18770
NZ_PYKA01000118.1	Protein Homology	CDS	8939	10399	.	-	0	ID=cds-WP_000206886.1;Parent=gene-C9E97_RS18370;Dbxref=GenBank:WP_000206886.1;Name=WP_000206886.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=C9E97_RS18370;product=cardiolipin synthase;protein_id=WP_000206886.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	10542	10715	.	+	.	ID=gene-C9E97_RS18375;Name=C9E97_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18375
NZ_PYKA01000118.1	Protein Homology	CDS	10542	10715	.	+	0	ID=cds-WP_001531561.1;Parent=gene-C9E97_RS18375;Dbxref=GenBank:WP_001531561.1;Name=WP_001531561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=C9E97_RS18375;product=YciY family protein;protein_id=WP_001531561.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	10759	11055	.	-	.	ID=gene-C9E97_RS18380;Name=C9E97_RS18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18380;old_locus_tag=C9E97_18775
NZ_PYKA01000118.1	Protein Homology	CDS	10759	11055	.	-	0	ID=cds-WP_000967605.1;Parent=gene-C9E97_RS18380;Dbxref=GenBank:WP_000967605.1;Name=WP_000967605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460697.1;locus_tag=C9E97_RS18380;product=YciI family protein;protein_id=WP_000967605.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	11279	12001	.	+	.	ID=gene-C9E97_RS18385;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=C9E97_RS18385;old_locus_tag=C9E97_18780
NZ_PYKA01000118.1	Protein Homology	CDS	11279	12001	.	+	0	ID=cds-WP_001531563.1;Parent=gene-C9E97_RS18385;Dbxref=GenBank:WP_001531563.1;Name=WP_001531563.1;Ontology_term=GO:0015891,GO:0055085,GO:0015343,GO:0030288;gbkey=CDS;gene=tonB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460696.1;locus_tag=C9E97_RS18385;product=TonB system transport protein TonB;protein_id=WP_001531563.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	12061	12462	.	-	.	ID=gene-C9E97_RS18390;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=C9E97_RS18390;old_locus_tag=C9E97_18785
NZ_PYKA01000118.1	Protein Homology	CDS	12061	12462	.	-	0	ID=cds-WP_000210317.1;Parent=gene-C9E97_RS18390;Dbxref=GenBank:WP_000210317.1;Name=WP_000210317.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460695.1;locus_tag=C9E97_RS18390;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000210317.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	12623	13162	.	-	.	ID=gene-C9E97_RS18395;Name=C9E97_RS18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18395;old_locus_tag=C9E97_18790
NZ_PYKA01000118.1	Protein Homology	CDS	12623	13162	.	-	0	ID=cds-WP_000808682.1;Parent=gene-C9E97_RS18395;Dbxref=GenBank:WP_000808682.1;Name=WP_000808682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460694.1;locus_tag=C9E97_RS18395;product=septation protein A;protein_id=WP_000808682.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	13219	13962	.	-	.	ID=gene-C9E97_RS18400;Name=C9E97_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18400;old_locus_tag=C9E97_18795
NZ_PYKA01000118.1	Protein Homology	CDS	13219	13962	.	-	0	ID=cds-WP_000028507.1;Parent=gene-C9E97_RS18400;Dbxref=GenBank:WP_000028507.1;Name=WP_000028507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460693.1;locus_tag=C9E97_RS18400;product=YciC family protein;protein_id=WP_000028507.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	13988	14392	.	-	.	ID=gene-C9E97_RS18405;Name=C9E97_RS18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18405;old_locus_tag=C9E97_18800
NZ_PYKA01000118.1	Protein Homology	CDS	13988	14392	.	-	0	ID=cds-WP_135369061.1;Parent=gene-C9E97_RS18405;Dbxref=GenBank:WP_135369061.1;Name=WP_135369061.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=C9E97_RS18405;product=YkgJ family cysteine cluster protein;protein_id=WP_135369061.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	14729	15367	.	+	.	ID=gene-C9E97_RS18410;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=C9E97_RS18410;old_locus_tag=C9E97_18805
NZ_PYKA01000118.1	Protein Homology	CDS	14729	15367	.	+	0	ID=cds-WP_000714799.1;Parent=gene-C9E97_RS18410;Dbxref=GenBank:WP_000714799.1;Name=WP_000714799.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460691.1;locus_tag=C9E97_RS18410;product=outer membrane protein OmpW;protein_id=WP_000714799.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	15449	16327	.	-	.	ID=gene-C9E97_RS18415;Name=C9E97_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18415;old_locus_tag=C9E97_18810
NZ_PYKA01000118.1	Protein Homology	CDS	15449	16327	.	-	0	ID=cds-WP_000488354.1;Parent=gene-C9E97_RS18415;Dbxref=GenBank:WP_000488354.1;Name=WP_000488354.1;Ontology_term=GO:0004096,GO:0046872;gbkey=CDS;go_function=catalase activity|0004096||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460690.1;locus_tag=C9E97_RS18415;product=manganese catalase family protein;protein_id=WP_000488354.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	16347	16853	.	-	.	ID=gene-C9E97_RS18420;Name=C9E97_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18420;old_locus_tag=C9E97_18815
NZ_PYKA01000118.1	Protein Homology	CDS	16347	16853	.	-	0	ID=cds-WP_001109977.1;Parent=gene-C9E97_RS18420;Dbxref=GenBank:WP_001109977.1;Name=WP_001109977.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460689.1;locus_tag=C9E97_RS18420;product=ferritin-like domain-containing protein;protein_id=WP_001109977.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	16927	17430	.	-	.	ID=gene-C9E97_RS18425;Name=C9E97_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18425;old_locus_tag=C9E97_18820
NZ_PYKA01000118.1	Protein Homology	CDS	16927	17430	.	-	0	ID=cds-WP_023219046.1;Parent=gene-C9E97_RS18425;Dbxref=GenBank:WP_023219046.1;Name=WP_023219046.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460688.1;locus_tag=C9E97_RS18425;product=ferritin-like domain-containing protein;protein_id=WP_023219046.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	17520	17702	.	-	.	ID=gene-C9E97_RS18430;Name=C9E97_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18430;old_locus_tag=C9E97_18825
NZ_PYKA01000118.1	Protein Homology	CDS	17520	17702	.	-	0	ID=cds-WP_000807657.1;Parent=gene-C9E97_RS18430;Dbxref=GenBank:WP_000807657.1;Name=WP_000807657.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460687.1;locus_tag=C9E97_RS18430;product=general stress protein;protein_id=WP_000807657.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	18182	18988	.	-	.	ID=gene-C9E97_RS18435;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=C9E97_RS18435;old_locus_tag=C9E97_18830
NZ_PYKA01000118.1	Protein Homology	CDS	18182	18988	.	-	0	ID=cds-WP_058145069.1;Parent=gene-C9E97_RS18435;Dbxref=GenBank:WP_058145069.1;Name=WP_058145069.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460686.1;locus_tag=C9E97_RS18435;product=tryptophan synthase subunit alpha;protein_id=WP_058145069.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	18988	20181	.	-	.	ID=gene-C9E97_RS18440;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=C9E97_RS18440;old_locus_tag=C9E97_18835
NZ_PYKA01000118.1	Protein Homology	CDS	18988	20181	.	-	0	ID=cds-WP_000209485.1;Parent=gene-C9E97_RS18440;Dbxref=GenBank:WP_000209485.1;Name=WP_000209485.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460685.1;locus_tag=C9E97_RS18440;product=tryptophan synthase subunit beta;protein_id=WP_000209485.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	20191	21549	.	-	.	ID=gene-C9E97_RS18445;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=C9E97_RS18445;old_locus_tag=C9E97_18840
NZ_PYKA01000118.1	Protein Homology	CDS	20191	21549	.	-	0	ID=cds-WP_023200821.1;Parent=gene-C9E97_RS18445;Dbxref=GenBank:WP_023200821.1;Name=WP_023200821.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460684.1;locus_tag=C9E97_RS18445;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_023200821.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	21553	23148	.	-	.	ID=gene-C9E97_RS18450;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=C9E97_RS18450;old_locus_tag=C9E97_18845
NZ_PYKA01000118.1	Protein Homology	CDS	21553	23148	.	-	0	ID=cds-WP_000763489.1;Parent=gene-C9E97_RS18450;Dbxref=GenBank:WP_000763489.1;Name=WP_000763489.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=C9E97_RS18450;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_000763489.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	23148	24710	.	-	.	ID=gene-C9E97_RS18455;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=C9E97_RS18455;old_locus_tag=C9E97_18850
NZ_PYKA01000118.1	Protein Homology	CDS	23148	24710	.	-	0	ID=cds-WP_135369654.1;Parent=gene-C9E97_RS18455;Dbxref=GenBank:WP_135369654.1;Name=WP_135369654.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460682.1;locus_tag=C9E97_RS18455;product=anthranilate synthase component I;protein_id=WP_135369654.1;transl_table=11
NZ_PYKA01000118.1	cmsearch	sequence_feature	24733	24828	.	-	.	ID=id-NZ_PYKA01000118.1:24733..24828;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PYKA01000118.1	RefSeq	gene	24805	24849	.	-	.	ID=gene-C9E97_RS18460;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=C9E97_RS18460;old_locus_tag=C9E97_18855
NZ_PYKA01000118.1	Protein Homology	CDS	24805	24849	.	-	0	ID=cds-WP_010989026.1;Parent=gene-C9E97_RS18460;Dbxref=GenBank:WP_010989026.1;Name=WP_010989026.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448140.1;locus_tag=C9E97_RS18460;product=trp operon leader peptide;protein_id=WP_010989026.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	24971	25852	.	+	.	ID=gene-C9E97_RS18465;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=C9E97_RS18465;old_locus_tag=C9E97_18860
NZ_PYKA01000118.1	Protein Homology	CDS	24971	25852	.	+	0	ID=cds-WP_061372244.1;Parent=gene-C9E97_RS18465;Dbxref=GenBank:WP_061372244.1;Name=WP_061372244.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460680.1;locus_tag=C9E97_RS18465;product=RNase RNM;protein_id=WP_061372244.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	25860	26480	.	+	.	ID=gene-C9E97_RS18470;Name=C9E97_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18470;old_locus_tag=C9E97_18865
NZ_PYKA01000118.1	Protein Homology	CDS	25860	26480	.	+	0	ID=cds-WP_000077250.1;Parent=gene-C9E97_RS18470;Dbxref=GenBank:WP_000077250.1;Name=WP_000077250.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=C9E97_RS18470;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_000077250.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	26581	27456	.	+	.	ID=gene-C9E97_RS18475;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=C9E97_RS18475;old_locus_tag=C9E97_18870
NZ_PYKA01000118.1	Protein Homology	CDS	26581	27456	.	+	0	ID=cds-WP_001291233.1;Parent=gene-C9E97_RS18475;Dbxref=GenBank:WP_001291233.1;Name=WP_001291233.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=C9E97_RS18475;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_001291233.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	27543	28133	.	-	.	ID=gene-C9E97_RS18480;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=C9E97_RS18480;old_locus_tag=C9E97_18875
NZ_PYKA01000118.1	Protein Homology	CDS	27543	28133	.	-	0	ID=cds-WP_001278865.1;Parent=gene-C9E97_RS18480;Dbxref=GenBank:WP_001278865.1;Name=WP_001278865.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460677.1;locus_tag=C9E97_RS18480;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_001278865.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	28130	28891	.	-	.	ID=gene-C9E97_RS18485;Name=C9E97_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18485;old_locus_tag=C9E97_18880
NZ_PYKA01000118.1	Protein Homology	CDS	28130	28891	.	-	0	ID=cds-WP_000559310.1;Parent=gene-C9E97_RS18485;Dbxref=GenBank:WP_000559310.1;Name=WP_000559310.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460676.1;locus_tag=C9E97_RS18485;product=YciK family oxidoreductase;protein_id=WP_000559310.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	29129	30175	.	+	.	ID=gene-C9E97_RS18490;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=C9E97_RS18490;old_locus_tag=C9E97_18885
NZ_PYKA01000118.1	Protein Homology	CDS	29129	30175	.	+	0	ID=cds-WP_000422084.1;Parent=gene-C9E97_RS18490;Dbxref=GenBank:WP_000422084.1;Name=WP_000422084.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460675.1;locus_tag=C9E97_RS18490;product=protease SohB;protein_id=WP_000422084.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	30217	30468	.	-	.	ID=gene-C9E97_RS18495;Name=C9E97_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18495;old_locus_tag=C9E97_18890
NZ_PYKA01000118.1	Protein Homology	CDS	30217	30468	.	-	0	ID=cds-WP_000548616.1;Parent=gene-C9E97_RS18495;Dbxref=GenBank:WP_000548616.1;Name=WP_000548616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460674.1;locus_tag=C9E97_RS18495;product=YciN family protein;protein_id=WP_000548616.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	30871	33468	.	+	.	ID=gene-C9E97_RS18500;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=C9E97_RS18500;old_locus_tag=C9E97_18900
NZ_PYKA01000118.1	Protein Homology	CDS	30871	33468	.	+	0	ID=cds-WP_000513593.1;Parent=gene-C9E97_RS18500;Dbxref=GenBank:WP_000513593.1;Name=WP_000513593.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=C9E97_RS18500;product=type I DNA topoisomerase;protein_id=WP_000513593.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	33879	34853	.	+	.	ID=gene-C9E97_RS18505;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=C9E97_RS18505;old_locus_tag=C9E97_18905
NZ_PYKA01000118.1	Protein Homology	CDS	33879	34853	.	+	0	ID=cds-WP_000776233.1;Parent=gene-C9E97_RS18505;Dbxref=GenBank:WP_000776233.1;Name=WP_000776233.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=C9E97_RS18505;product=HTH-type transcriptional regulator CysB;protein_id=WP_000776233.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	35134	35274	.	+	.	ID=gene-C9E97_RS18510;Name=C9E97_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18510;old_locus_tag=C9E97_18910
NZ_PYKA01000118.1	Protein Homology	CDS	35134	35274	.	+	0	ID=cds-WP_213083417.1;Parent=gene-C9E97_RS18510;Dbxref=GenBank:WP_213083417.1;Name=WP_213083417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=C9E97_RS18510;product=YmiA family putative membrane protein;protein_id=WP_213083417.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	35275	35445	.	+	.	ID=gene-C9E97_RS18515;Name=C9E97_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18515;old_locus_tag=C9E97_18915
NZ_PYKA01000118.1	Protein Homology	CDS	35275	35445	.	+	0	ID=cds-WP_000029027.1;Parent=gene-C9E97_RS18515;Dbxref=GenBank:WP_000029027.1;Name=WP_000029027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000029022.1;locus_tag=C9E97_RS18515;product=hypothetical protein;protein_id=WP_000029027.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	35555	35647	.	+	.	ID=gene-C9E97_RS23870;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=C9E97_RS23870
NZ_PYKA01000118.1	Protein Homology	CDS	35555	35647	.	+	0	ID=cds-WP_223148964.1;Parent=gene-C9E97_RS23870;Dbxref=GenBank:WP_223148964.1;Name=WP_223148964.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_226998799.1;locus_tag=C9E97_RS23870;product=small membrane protein YmiC;protein_id=WP_223148964.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	35830	38505	.	+	.	ID=gene-C9E97_RS18520;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=C9E97_RS18520;old_locus_tag=C9E97_18920
NZ_PYKA01000118.1	Protein Homology	CDS	35830	38505	.	+	0	ID=cds-WP_135369655.1;Parent=gene-C9E97_RS18520;Dbxref=GenBank:WP_135369655.1;Name=WP_135369655.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=C9E97_RS18520;product=aconitate hydratase AcnA;protein_id=WP_135369655.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	38561	39151	.	-	.	ID=gene-C9E97_RS18525;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=C9E97_RS18525;old_locus_tag=C9E97_18925
NZ_PYKA01000118.1	Protein Homology	CDS	38561	39151	.	-	0	ID=cds-WP_001176284.1;Parent=gene-C9E97_RS18525;Dbxref=GenBank:WP_001176284.1;Name=WP_001176284.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460670.1;locus_tag=C9E97_RS18525;product=GTP cyclohydrolase II;protein_id=WP_001176284.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	39347	40111	.	+	.	ID=gene-C9E97_RS18530;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=C9E97_RS18530;old_locus_tag=C9E97_18930
NZ_PYKA01000118.1	Protein Homology	CDS	39347	40111	.	+	0	ID=cds-WP_000948636.1;Parent=gene-C9E97_RS18530;Dbxref=GenBank:WP_000948636.1;Name=WP_000948636.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460669.1;locus_tag=C9E97_RS18530;product=phosphatidylglycerophosphatase B;protein_id=WP_000948636.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	40261	40569	.	+	.	ID=gene-C9E97_RS18535;Name=C9E97_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18535;old_locus_tag=C9E97_18940
NZ_PYKA01000118.1	Protein Homology	CDS	40261	40569	.	+	0	ID=cds-WP_000876301.1;Parent=gene-C9E97_RS18535;Dbxref=GenBank:WP_000876301.1;Name=WP_000876301.1;Ontology_term=GO:0008653,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460668.1;locus_tag=C9E97_RS18535;product=LapA family protein;protein_id=WP_000876301.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	40576	41745	.	+	.	ID=gene-C9E97_RS18540;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=C9E97_RS18540;old_locus_tag=C9E97_18945
NZ_PYKA01000118.1	Protein Homology	CDS	40576	41745	.	+	0	ID=cds-WP_000891378.1;Parent=gene-C9E97_RS18540;Dbxref=GenBank:WP_000891378.1;Name=WP_000891378.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=C9E97_RS18540;product=lipopolysaccharide assembly protein LapB;protein_id=WP_000891378.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	41936	42673	.	+	.	ID=gene-C9E97_RS18545;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=C9E97_RS18545;old_locus_tag=C9E97_18955
NZ_PYKA01000118.1	Protein Homology	CDS	41936	42673	.	+	0	ID=cds-WP_001537903.1;Parent=gene-C9E97_RS18545;Dbxref=GenBank:WP_001537903.1;Name=WP_001537903.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460666.1;locus_tag=C9E97_RS18545;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_001537903.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	42673	42999	.	+	.	ID=gene-C9E97_RS18550;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=C9E97_RS18550;old_locus_tag=C9E97_18960
NZ_PYKA01000118.1	Protein Homology	CDS	42673	42999	.	+	0	ID=cds-WP_001285199.1;Parent=gene-C9E97_RS18550;Dbxref=GenBank:WP_001285199.1;Name=WP_001285199.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460665.1;locus_tag=C9E97_RS18550;product=stress response translation initiation inhibitor YciH;protein_id=WP_001285199.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	43119	43337	.	-	.	ID=gene-C9E97_RS18555;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=C9E97_RS18555;old_locus_tag=C9E97_18965
NZ_PYKA01000118.1	Protein Homology	CDS	43119	43337	.	-	0	ID=cds-WP_000481166.1;Parent=gene-C9E97_RS18555;Dbxref=GenBank:WP_000481166.1;Name=WP_000481166.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=C9E97_RS18555;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_000481166.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	43596	44348	.	-	.	ID=gene-C9E97_RS18560;Name=C9E97_RS18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18560;old_locus_tag=C9E97_18970
NZ_PYKA01000118.1	Protein Homology	CDS	43596	44348	.	-	0	ID=cds-WP_001088594.1;Parent=gene-C9E97_RS18560;Dbxref=GenBank:WP_001088594.1;Name=WP_001088594.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460663.1;locus_tag=C9E97_RS18560;product=DNA-binding transcriptional regulator YciT;protein_id=WP_001088594.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	44435	44614	.	-	.	ID=gene-C9E97_RS18565;Name=C9E97_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18565;old_locus_tag=C9E97_18975
NZ_PYKA01000118.1	Protein Homology	CDS	44435	44614	.	-	0	ID=cds-WP_001279854.1;Parent=gene-C9E97_RS18565;Dbxref=GenBank:WP_001279854.1;Name=WP_001279854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279854.1;locus_tag=C9E97_RS18565;product=YciZ family protein;protein_id=WP_001279854.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	44736	46718	.	-	.	ID=gene-C9E97_RS18570;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=C9E97_RS18570;old_locus_tag=C9E97_18980
NZ_PYKA01000118.1	Protein Homology	CDS	44736	46718	.	-	0	ID=cds-WP_135369656.1;Parent=gene-C9E97_RS18570;Dbxref=GenBank:WP_135369656.1;Name=WP_135369656.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=C9E97_RS18570;product=cyclic di-GMP phosphodiesterase;protein_id=WP_135369656.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	46980	48914	.	-	.	ID=gene-C9E97_RS18575;Name=C9E97_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18575;old_locus_tag=C9E97_18990
NZ_PYKA01000118.1	Protein Homology	CDS	46980	48914	.	-	0	ID=cds-WP_135369657.1;Parent=gene-C9E97_RS18575;Dbxref=GenBank:WP_135369657.1;Name=WP_135369657.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460661.1;locus_tag=C9E97_RS18575;product=exoribonuclease II;protein_id=WP_135369657.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	pseudogene	49159	50136	.	-	.	ID=gene-C9E97_RS18580;Name=C9E97_RS18580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS18580;old_locus_tag=C9E97_18995;partial=true;pseudo=true;start_range=.,49159
NZ_PYKA01000118.1	Protein Homology	CDS	49159	50136	.	-	0	ID=cds-C9E97_RS18580;Parent=gene-C9E97_RS18580;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460660.1;locus_tag=C9E97_RS18580;partial=true;product=carboxymuconolactone decarboxylase family protein;pseudo=true;start_range=.,49159;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	50336	51124	.	-	.	ID=gene-C9E97_RS18585;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=C9E97_RS18585;old_locus_tag=C9E97_19000
NZ_PYKA01000118.1	Protein Homology	CDS	50336	51124	.	-	0	ID=cds-WP_000506501.1;Parent=gene-C9E97_RS18585;Dbxref=GenBank:WP_000506501.1;Name=WP_000506501.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=C9E97_RS18585;product=enoyl-ACP reductase FabI;protein_id=WP_000506501.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	51242	51541	.	-	.	ID=gene-C9E97_RS18590;Name=C9E97_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18590;old_locus_tag=C9E97_19005
NZ_PYKA01000118.1	Protein Homology	CDS	51242	51541	.	-	0	ID=cds-WP_129397197.1;Parent=gene-C9E97_RS18590;Dbxref=GenBank:WP_129397197.1;Name=WP_129397197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460658.1;locus_tag=C9E97_RS18590;product=hypothetical protein;protein_id=WP_129397197.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	51516	51695	.	-	.	ID=gene-C9E97_RS18595;Name=C9E97_RS18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18595;old_locus_tag=C9E97_19010
NZ_PYKA01000118.1	Protein Homology	CDS	51516	51695	.	-	0	ID=cds-WP_010989024.1;Parent=gene-C9E97_RS18595;Dbxref=GenBank:WP_010989024.1;Name=WP_010989024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460657.1;locus_tag=C9E97_RS18595;product=hypothetical protein;protein_id=WP_010989024.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	51730	53103	.	+	.	ID=gene-C9E97_RS18600;Name=steC;gbkey=Gene;gene=steC;gene_biotype=protein_coding;locus_tag=C9E97_RS18600;old_locus_tag=C9E97_19015
NZ_PYKA01000118.1	Protein Homology	CDS	51730	53103	.	+	0	ID=cds-WP_135420207.1;Parent=gene-C9E97_RS18600;Dbxref=GenBank:WP_135420207.1;Name=WP_135420207.1;gbkey=CDS;gene=steC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460656.1;locus_tag=C9E97_RS18600;product=SPI-2 type III secretion system effector kinase SteC;protein_id=WP_135420207.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	53568	54275	.	+	.	ID=gene-C9E97_RS18605;Name=C9E97_RS18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18605;old_locus_tag=C9E97_19020
NZ_PYKA01000118.1	Protein Homology	CDS	53568	54275	.	+	0	ID=cds-WP_135369775.1;Parent=gene-C9E97_RS18605;Dbxref=GenBank:WP_135369775.1;Name=WP_135369775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748430.1;locus_tag=C9E97_RS18605;product=EAL domain-containing protein;protein_id=WP_135369775.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	54291	55097	.	-	.	ID=gene-C9E97_RS18610;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=C9E97_RS18610;old_locus_tag=C9E97_19025
NZ_PYKA01000118.1	Protein Homology	CDS	54291	55097	.	-	0	ID=cds-WP_000230462.1;Parent=gene-C9E97_RS18610;Dbxref=GenBank:WP_000230462.1;Name=WP_000230462.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460654.1;locus_tag=C9E97_RS18610;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_000230462.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	55099	56091	.	-	.	ID=gene-C9E97_RS18615;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=C9E97_RS18615;old_locus_tag=C9E97_19030
NZ_PYKA01000118.1	Protein Homology	CDS	55099	56091	.	-	0	ID=cds-WP_001128869.1;Parent=gene-C9E97_RS18615;Dbxref=GenBank:WP_001128869.1;Name=WP_001128869.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460653.1;locus_tag=C9E97_RS18615;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_001128869.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	56091	56981	.	-	.	ID=gene-C9E97_RS18620;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=C9E97_RS18620;old_locus_tag=C9E97_19035
NZ_PYKA01000118.1	Protein Homology	CDS	56091	56981	.	-	0	ID=cds-WP_135369774.1;Parent=gene-C9E97_RS18620;Dbxref=GenBank:WP_135369774.1;Name=WP_135369774.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460652.1;locus_tag=C9E97_RS18620;product=peptide ABC transporter permease SapC;protein_id=WP_135369774.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	56968	57933	.	-	.	ID=gene-C9E97_RS18625;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=C9E97_RS18625;old_locus_tag=C9E97_19040
NZ_PYKA01000118.1	Protein Homology	CDS	56968	57933	.	-	0	ID=cds-WP_000583298.1;Parent=gene-C9E97_RS18625;Dbxref=GenBank:WP_000583298.1;Name=WP_000583298.1;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=C9E97_RS18625;product=peptide ABC transporter permease SapB;protein_id=WP_000583298.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	57930	59579	.	-	.	ID=gene-C9E97_RS18630;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=C9E97_RS18630;old_locus_tag=C9E97_19045
NZ_PYKA01000118.1	Protein Homology	CDS	57930	59579	.	-	0	ID=cds-WP_135369773.1;Parent=gene-C9E97_RS18630;Dbxref=GenBank:WP_135369773.1;Name=WP_135369773.1;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=C9E97_RS18630;product=peptide ABC transporter substrate-binding protein SapA;protein_id=WP_135369773.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	59691	60671	.	-	.	ID=gene-C9E97_RS18635;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=C9E97_RS18635;old_locus_tag=C9E97_19050
NZ_PYKA01000118.1	Protein Homology	CDS	59691	60671	.	-	0	ID=cds-WP_000807306.1;Parent=gene-C9E97_RS18635;Dbxref=GenBank:WP_000807306.1;Name=WP_000807306.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460649.1;locus_tag=C9E97_RS18635;product=phage shock protein operon transcriptional activator;protein_id=WP_000807306.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	60842	61510	.	+	.	ID=gene-C9E97_RS18640;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=C9E97_RS18640;old_locus_tag=C9E97_19055
NZ_PYKA01000118.1	Protein Homology	CDS	60842	61510	.	+	0	ID=cds-WP_000511000.1;Parent=gene-C9E97_RS18640;Dbxref=GenBank:WP_000511000.1;Name=WP_000511000.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460648.1;locus_tag=C9E97_RS18640;product=phage shock protein PspA;protein_id=WP_000511000.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	61570	61794	.	+	.	ID=gene-C9E97_RS18645;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=C9E97_RS18645;old_locus_tag=C9E97_19060
NZ_PYKA01000118.1	Protein Homology	CDS	61570	61794	.	+	0	ID=cds-WP_001274953.1;Parent=gene-C9E97_RS18645;Dbxref=GenBank:WP_001274953.1;Name=WP_001274953.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460647.1;locus_tag=C9E97_RS18645;product=envelope stress response membrane protein PspB;protein_id=WP_001274953.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	61794	62153	.	+	.	ID=gene-C9E97_RS18650;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=C9E97_RS18650;old_locus_tag=C9E97_19065
NZ_PYKA01000118.1	Protein Homology	CDS	61794	62153	.	+	0	ID=cds-WP_000508938.1;Parent=gene-C9E97_RS18650;Dbxref=GenBank:WP_000508938.1;Name=WP_000508938.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460646.1;locus_tag=C9E97_RS18650;product=envelope stress response membrane protein PspC;protein_id=WP_000508938.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	62176	62394	.	+	.	ID=gene-C9E97_RS18655;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=C9E97_RS18655;old_locus_tag=C9E97_19070
NZ_PYKA01000118.1	Protein Homology	CDS	62176	62394	.	+	0	ID=cds-WP_001097607.1;Parent=gene-C9E97_RS18655;Dbxref=GenBank:WP_001097607.1;Name=WP_001097607.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460645.1;locus_tag=C9E97_RS18655;product=phage shock protein PspD;protein_id=WP_001097607.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	62470	62784	.	+	.	ID=gene-C9E97_RS18660;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=C9E97_RS18660;old_locus_tag=C9E97_19075
NZ_PYKA01000118.1	Protein Homology	CDS	62470	62784	.	+	0	ID=cds-WP_000913428.1;Parent=gene-C9E97_RS18660;Dbxref=GenBank:WP_000913428.1;Name=WP_000913428.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460644.1;locus_tag=C9E97_RS18660;product=thiosulfate sulfurtransferase PspE;protein_id=WP_000913428.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	62933	64330	.	+	.	ID=gene-C9E97_RS18665;Name=C9E97_RS18665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18665;old_locus_tag=C9E97_19080
NZ_PYKA01000118.1	Protein Homology	CDS	62933	64330	.	+	0	ID=cds-WP_050067638.1;Parent=gene-C9E97_RS18665;Dbxref=GenBank:WP_050067638.1;Name=WP_050067638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=C9E97_RS18665;product=YcjX family protein;protein_id=WP_050067638.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	64327	65388	.	+	.	ID=gene-C9E97_RS18670;Name=C9E97_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18670;old_locus_tag=C9E97_19085
NZ_PYKA01000118.1	Protein Homology	CDS	64327	65388	.	+	0	ID=cds-WP_126479039.1;Parent=gene-C9E97_RS18670;Dbxref=GenBank:WP_126479039.1;Name=WP_126479039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460642.1;locus_tag=C9E97_RS18670;product=YcjF family protein;protein_id=WP_126479039.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	65536	67077	.	+	.	ID=gene-C9E97_RS18675;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=C9E97_RS18675;old_locus_tag=C9E97_19090
NZ_PYKA01000118.1	Protein Homology	CDS	65536	67077	.	+	0	ID=cds-WP_135369772.1;Parent=gene-C9E97_RS18675;Dbxref=GenBank:WP_135369772.1;Name=WP_135369772.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460641.1;locus_tag=C9E97_RS18675;product=transcriptional regulator TyrR;protein_id=WP_135369772.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	67167	67673	.	-	.	ID=gene-C9E97_RS18680;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=C9E97_RS18680;old_locus_tag=C9E97_19095
NZ_PYKA01000118.1	Protein Homology	CDS	67167	67673	.	-	0	ID=cds-WP_000084401.1;Parent=gene-C9E97_RS18680;Dbxref=GenBank:WP_000084401.1;Name=WP_000084401.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460640.1;locus_tag=C9E97_RS18680;product=thiol peroxidase;protein_id=WP_000084401.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	67789	68754	.	+	.	ID=gene-C9E97_RS18685;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=C9E97_RS18685;old_locus_tag=C9E97_19100
NZ_PYKA01000118.1	Protein Homology	CDS	67789	68754	.	+	0	ID=cds-WP_080222203.1;Parent=gene-C9E97_RS18685;Dbxref=GenBank:WP_080222203.1;Name=WP_080222203.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460639.1;locus_tag=C9E97_RS18685;product=L-Ala-D/L-Glu epimerase;protein_id=WP_080222203.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	68729	69457	.	-	.	ID=gene-C9E97_RS18690;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=C9E97_RS18690;old_locus_tag=C9E97_19105
NZ_PYKA01000118.1	Protein Homology	CDS	68729	69457	.	-	0	ID=cds-WP_000219108.1;Parent=gene-C9E97_RS18690;Dbxref=GenBank:WP_000219108.1;Name=WP_000219108.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460638.1;locus_tag=C9E97_RS18690;product=murein tripeptide amidase MpaA;protein_id=WP_000219108.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	69647	71260	.	+	.	ID=gene-C9E97_RS18695;Name=C9E97_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18695;old_locus_tag=C9E97_19110
NZ_PYKA01000118.1	Protein Homology	CDS	69647	71260	.	+	0	ID=cds-WP_001216563.1;Parent=gene-C9E97_RS18695;Dbxref=GenBank:WP_001216563.1;Name=WP_001216563.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460637.1;locus_tag=C9E97_RS18695;product=peptide ABC transporter substrate-binding protein;protein_id=WP_001216563.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	71480	71824	.	-	.	ID=gene-C9E97_RS18700;Name=C9E97_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18700;old_locus_tag=C9E97_19115
NZ_PYKA01000118.1	Protein Homology	CDS	71480	71824	.	-	0	ID=cds-WP_000950635.1;Parent=gene-C9E97_RS18700;Dbxref=GenBank:WP_000950635.1;Name=WP_000950635.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007712977.1;locus_tag=C9E97_RS18700;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000950635.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	71859	72140	.	-	.	ID=gene-C9E97_RS18705;Name=C9E97_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18705;old_locus_tag=C9E97_19120
NZ_PYKA01000118.1	Protein Homology	CDS	71859	72140	.	-	0	ID=cds-WP_000323820.1;Parent=gene-C9E97_RS18705;Dbxref=GenBank:WP_000323820.1;Name=WP_000323820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706353.1;locus_tag=C9E97_RS18705;product=hypothetical protein;protein_id=WP_000323820.1;transl_table=11
NZ_PYKA01000118.1	RefSeq	gene	72493	73416	.	-	.	ID=gene-C9E97_RS18715;Name=C9E97_RS18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18715;old_locus_tag=C9E97_19130
NZ_PYKA01000118.1	Protein Homology	CDS	72493	73416	.	-	0	ID=cds-WP_001257182.1;Parent=gene-C9E97_RS18715;Dbxref=GenBank:WP_001257182.1;Name=WP_001257182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257182.1;locus_tag=C9E97_RS18715;product=LysR substrate-binding domain-containing protein;protein_id=WP_001257182.1;transl_table=11
##sequence-region NZ_PYKA01000109.1 1 258101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000109.1	RefSeq	region	1	258101	.	+	.	ID=NZ_PYKA01000109.1:1..258101;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000109.1	RefSeq	gene	32	649	.	+	.	ID=gene-C9E97_RS14850;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=C9E97_RS14850;old_locus_tag=C9E97_15180
NZ_PYKA01000109.1	Protein Homology	CDS	32	649	.	+	0	ID=cds-WP_000213069.1;Parent=gene-C9E97_RS14850;Dbxref=GenBank:WP_000213069.1;Name=WP_000213069.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=C9E97_RS14850;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_000213069.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	651	1505	.	+	.	ID=gene-C9E97_RS14855;Name=C9E97_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14855;old_locus_tag=C9E97_15185
NZ_PYKA01000109.1	Protein Homology	CDS	651	1505	.	+	0	ID=cds-WP_135369114.1;Parent=gene-C9E97_RS14855;Dbxref=GenBank:WP_135369114.1;Name=WP_135369114.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460456.1;locus_tag=C9E97_RS14855;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_135369114.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	1548	2162	.	+	.	ID=gene-C9E97_RS14860;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=C9E97_RS14860;old_locus_tag=C9E97_15190
NZ_PYKA01000109.1	Protein Homology	CDS	1548	2162	.	+	0	ID=cds-WP_000206562.1;Parent=gene-C9E97_RS14860;Dbxref=GenBank:WP_000206562.1;Name=WP_000206562.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460455.1;locus_tag=C9E97_RS14860;product=Tat proofreading chaperone DmsD;protein_id=WP_000206562.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	2467	3177	.	+	.	ID=gene-C9E97_RS14865;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=C9E97_RS14865;old_locus_tag=C9E97_15195
NZ_PYKA01000109.1	Protein Homology	CDS	2467	3177	.	+	0	ID=cds-WP_135369115.1;Parent=gene-C9E97_RS14865;Dbxref=GenBank:WP_135369115.1;Name=WP_135369115.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460454.1;locus_tag=C9E97_RS14865;product=osmoprotectant ABC transporter permease OsmY;protein_id=WP_135369115.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	3206	4108	.	+	.	ID=gene-C9E97_RS14870;Name=osmX;gbkey=Gene;gene=osmX;gene_biotype=protein_coding;locus_tag=C9E97_RS14870;old_locus_tag=C9E97_15200
NZ_PYKA01000109.1	Protein Homology	CDS	3206	4108	.	+	0	ID=cds-WP_001211193.1;Parent=gene-C9E97_RS14870;Dbxref=GenBank:WP_001211193.1;Name=WP_001211193.1;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460453.1;locus_tag=C9E97_RS14870;product=osmoprotectant ABC transporter substrate-binding protein OsmX;protein_id=WP_001211193.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	4118	4765	.	+	.	ID=gene-C9E97_RS14875;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=C9E97_RS14875;old_locus_tag=C9E97_15205
NZ_PYKA01000109.1	Protein Homology	CDS	4118	4765	.	+	0	ID=cds-WP_000379677.1;Parent=gene-C9E97_RS14875;Dbxref=GenBank:WP_000379677.1;Name=WP_000379677.1;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460452.1;locus_tag=C9E97_RS14875;product=osmoprotectant ABC transporter permease OsmW;protein_id=WP_000379677.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	4765	5913	.	+	.	ID=gene-C9E97_RS14880;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=C9E97_RS14880;old_locus_tag=C9E97_15210
NZ_PYKA01000109.1	Protein Homology	CDS	4765	5913	.	+	0	ID=cds-WP_000593088.1;Parent=gene-C9E97_RS14880;Dbxref=GenBank:WP_000593088.1;Name=WP_000593088.1;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460451.1;locus_tag=C9E97_RS14880;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=WP_000593088.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	6049	7338	.	+	.	ID=gene-C9E97_RS14885;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=C9E97_RS14885;old_locus_tag=C9E97_15215
NZ_PYKA01000109.1	Protein Homology	CDS	6049	7338	.	+	0	ID=cds-WP_023228317.1;Parent=gene-C9E97_RS14885;Dbxref=GenBank:WP_023228317.1;Name=WP_023228317.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460450.3;locus_tag=C9E97_RS14885;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_023228317.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	7294	7989	.	-	.	ID=gene-C9E97_RS14890;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=C9E97_RS14890;old_locus_tag=C9E97_15220
NZ_PYKA01000109.1	Protein Homology	CDS	7294	7989	.	-	0	ID=cds-WP_000919233.1;Parent=gene-C9E97_RS14890;Dbxref=GenBank:WP_000919233.1;Name=WP_000919233.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=C9E97_RS14890;product=dethiobiotin synthase;protein_id=WP_000919233.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	8115	9335	.	-	.	ID=gene-C9E97_RS14895;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=C9E97_RS14895;old_locus_tag=C9E97_15225
NZ_PYKA01000109.1	Protein Homology	CDS	8115	9335	.	-	0	ID=cds-WP_000225087.1;Parent=gene-C9E97_RS14895;Dbxref=GenBank:WP_000225087.1;Name=WP_000225087.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460448.1;locus_tag=C9E97_RS14895;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_000225087.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	9463	10362	.	-	.	ID=gene-C9E97_RS14900;Name=C9E97_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14900;old_locus_tag=C9E97_15235
NZ_PYKA01000109.1	Protein Homology	CDS	9463	10362	.	-	0	ID=cds-WP_001019577.1;Parent=gene-C9E97_RS14900;Dbxref=GenBank:WP_001019577.1;Name=WP_001019577.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460447.1;locus_tag=C9E97_RS14900;product=LysR family transcriptional regulator;protein_id=WP_001019577.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	10482	11735	.	+	.	ID=gene-C9E97_RS14905;Name=C9E97_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14905;old_locus_tag=C9E97_15240
NZ_PYKA01000109.1	Protein Homology	CDS	10482	11735	.	+	0	ID=cds-WP_000091796.1;Parent=gene-C9E97_RS14905;Dbxref=GenBank:WP_000091796.1;Name=WP_000091796.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460446.1;locus_tag=C9E97_RS14905;product=MFS transporter;protein_id=WP_000091796.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	11802	11894	.	-	.	ID=gene-C9E97_RS23585;Name=C9E97_RS23585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23585
NZ_PYKA01000109.1	Protein Homology	CDS	11802	11894	.	-	0	ID=cds-WP_001068154.1;Parent=gene-C9E97_RS23585;Dbxref=GenBank:WP_001068154.1;Name=WP_001068154.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=C9E97_RS23585;product=KPN_01571 family protein;protein_id=WP_001068154.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	12130	12378	.	+	.	ID=gene-C9E97_RS14910;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=C9E97_RS14910;old_locus_tag=C9E97_15245
NZ_PYKA01000109.1	Protein Homology	CDS	12130	12378	.	+	0	ID=cds-WP_047606675.1;Parent=gene-C9E97_RS14910;Dbxref=GenBank:WP_047606675.1;Name=WP_047606675.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001698353.1;locus_tag=C9E97_RS14910;product=acid resistance repetitive basic protein Asr;protein_id=WP_047606675.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	12647	13468	.	+	.	ID=gene-C9E97_RS14915;Name=C9E97_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14915;old_locus_tag=C9E97_15250
NZ_PYKA01000109.1	Protein Homology	CDS	12647	13468	.	+	0	ID=cds-WP_000549649.1;Parent=gene-C9E97_RS14915;Dbxref=GenBank:WP_000549649.1;Name=WP_000549649.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460444.1;locus_tag=C9E97_RS14915;product=trypsin-like serine peptidase;protein_id=WP_000549649.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	13503	13832	.	-	.	ID=gene-C9E97_RS14920;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=C9E97_RS14920;old_locus_tag=C9E97_15255
NZ_PYKA01000109.1	Protein Homology	CDS	13503	13832	.	-	0	ID=cds-WP_135369116.1;Parent=gene-C9E97_RS14920;Dbxref=GenBank:WP_135369116.1;Name=WP_135369116.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460443.1;locus_tag=C9E97_RS14920;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_135369116.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	13819	14181	.	-	.	ID=gene-C9E97_RS14925;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=C9E97_RS14925;old_locus_tag=C9E97_15260
NZ_PYKA01000109.1	Protein Homology	CDS	13819	14181	.	-	0	ID=cds-WP_000500278.1;Parent=gene-C9E97_RS14925;Dbxref=GenBank:WP_000500278.1;Name=WP_000500278.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460442.1;locus_tag=C9E97_RS14925;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_000500278.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	14293	14463	.	-	.	ID=gene-C9E97_RS24070;Name=C9E97_RS24070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS24070;old_locus_tag=C9E97_15265
NZ_PYKA01000109.1	Protein Homology	CDS	14293	14463	.	-	0	ID=cds-WP_001539987.1;Parent=gene-C9E97_RS24070;Dbxref=GenBank:WP_001539987.1;Name=WP_001539987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334396.1;locus_tag=C9E97_RS24070;product=hypothetical protein;protein_id=WP_001539987.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	14599	15633	.	+	.	ID=gene-C9E97_RS14935;Name=C9E97_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14935;old_locus_tag=C9E97_15270
NZ_PYKA01000109.1	Protein Homology	CDS	14599	15633	.	+	0	ID=cds-WP_001118268.1;Parent=gene-C9E97_RS14935;Dbxref=GenBank:WP_001118268.1;Name=WP_001118268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460441.1;locus_tag=C9E97_RS14935;product=AI-2E family transporter;protein_id=WP_001118268.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	15808	17196	.	-	.	ID=gene-C9E97_RS14940;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=C9E97_RS14940;old_locus_tag=C9E97_15275
NZ_PYKA01000109.1	Protein Homology	CDS	15808	17196	.	-	0	ID=cds-WP_000014056.1;Parent=gene-C9E97_RS14940;Dbxref=GenBank:WP_000014056.1;Name=WP_000014056.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=C9E97_RS14940;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_000014056.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	17207	18736	.	-	.	ID=gene-C9E97_RS14945;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=C9E97_RS14945;old_locus_tag=C9E97_15280
NZ_PYKA01000109.1	Protein Homology	CDS	17207	18736	.	-	0	ID=cds-WP_001219360.1;Parent=gene-C9E97_RS14945;Dbxref=GenBank:WP_001219360.1;Name=WP_001219360.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460439.1;locus_tag=C9E97_RS14945;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_001219360.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	19263	20207	.	+	.	ID=gene-C9E97_RS14950;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=C9E97_RS14950;old_locus_tag=C9E97_15285
NZ_PYKA01000109.1	Protein Homology	CDS	19263	20207	.	+	0	ID=cds-WP_000769294.1;Parent=gene-C9E97_RS14950;Dbxref=GenBank:WP_000769294.1;Name=WP_000769294.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460438.1;locus_tag=C9E97_RS14950;product=DUF1471 family protein YdgH;protein_id=WP_000769294.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	20506	21888	.	+	.	ID=gene-C9E97_RS14955;Name=C9E97_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14955;old_locus_tag=C9E97_15290
NZ_PYKA01000109.1	Protein Homology	CDS	20506	21888	.	+	0	ID=cds-WP_000412353.1;Parent=gene-C9E97_RS14955;Dbxref=GenBank:WP_000412353.1;Name=WP_000412353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460437.1;locus_tag=C9E97_RS14955;product=amino acid permease;protein_id=WP_000412353.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	21950	22285	.	-	.	ID=gene-C9E97_RS14960;Name=C9E97_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14960;old_locus_tag=C9E97_15295
NZ_PYKA01000109.1	Protein Homology	CDS	21950	22285	.	-	0	ID=cds-WP_000524877.1;Parent=gene-C9E97_RS14960;Dbxref=GenBank:WP_000524877.1;Name=WP_000524877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460436.1;locus_tag=C9E97_RS14960;product=GlpM family protein;protein_id=WP_000524877.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	22412	23143	.	+	.	ID=gene-C9E97_RS14965;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=C9E97_RS14965;old_locus_tag=C9E97_15300
NZ_PYKA01000109.1	Protein Homology	CDS	22412	23143	.	+	0	ID=cds-WP_001080048.1;Parent=gene-C9E97_RS14965;Dbxref=GenBank:WP_001080048.1;Name=WP_001080048.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460435.1;locus_tag=C9E97_RS14965;product=two-component system response regulator RstA;protein_id=WP_001080048.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	23623	24774	.	+	.	ID=gene-C9E97_RS14975;Name=ompS2;gbkey=Gene;gene=ompS2;gene_biotype=protein_coding;locus_tag=C9E97_RS14975;old_locus_tag=C9E97_15310
NZ_PYKA01000109.1	Protein Homology	CDS	23623	24774	.	+	0	ID=cds-WP_000824313.1;Parent=gene-C9E97_RS14975;Dbxref=GenBank:WP_000824313.1;Name=WP_000824313.1;gbkey=CDS;gene=ompS2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460434.1;locus_tag=C9E97_RS14975;product=porin OmpS2;protein_id=WP_000824313.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	24927	26633	.	+	.	ID=gene-C9E97_RS14980;Name=C9E97_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14980;old_locus_tag=C9E97_15315
NZ_PYKA01000109.1	Protein Homology	CDS	24927	26633	.	+	0	ID=cds-WP_135369663.1;Parent=gene-C9E97_RS14980;Dbxref=GenBank:WP_135369663.1;Name=WP_135369663.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460433.1;locus_tag=C9E97_RS14980;product=amidohydrolase;protein_id=WP_135369663.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	26744	28045	.	+	.	ID=gene-C9E97_RS14985;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=C9E97_RS14985;old_locus_tag=C9E97_15320
NZ_PYKA01000109.1	Protein Homology	CDS	26744	28045	.	+	0	ID=cds-WP_094897398.1;Parent=gene-C9E97_RS14985;Dbxref=GenBank:WP_094897398.1;Name=WP_094897398.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460432.1;locus_tag=C9E97_RS14985;product=two-component system sensor histidine kinase RstB;protein_id=WP_094897398.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	28121	29050	.	+	.	ID=gene-C9E97_RS14990;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=C9E97_RS14990;old_locus_tag=C9E97_15325
NZ_PYKA01000109.1	Protein Homology	CDS	28121	29050	.	+	0	ID=cds-WP_135369666.1;Parent=gene-C9E97_RS14990;Dbxref=GenBank:WP_135369666.1;Name=WP_135369666.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460431.1;locus_tag=C9E97_RS14990;product=DNA replication terminus site-binding protein;protein_id=WP_135369666.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	29047	30450	.	-	.	ID=gene-C9E97_RS14995;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=C9E97_RS14995;old_locus_tag=C9E97_15330
NZ_PYKA01000109.1	Protein Homology	CDS	29047	30450	.	-	0	ID=cds-WP_023259073.1;Parent=gene-C9E97_RS14995;Dbxref=GenBank:WP_023259073.1;Name=WP_023259073.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460430.1;locus_tag=C9E97_RS14995;product=class II fumarate hydratase;protein_id=WP_023259073.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	30618	32264	.	-	.	ID=gene-C9E97_RS15000;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=C9E97_RS15000;old_locus_tag=C9E97_15335
NZ_PYKA01000109.1	Protein Homology	CDS	30618	32264	.	-	0	ID=cds-WP_000066609.1;Parent=gene-C9E97_RS15000;Dbxref=GenBank:WP_000066609.1;Name=WP_000066609.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=C9E97_RS15000;product=class I fumarate hydratase;protein_id=WP_000066609.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	32464	33639	.	+	.	ID=gene-C9E97_RS15005;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=C9E97_RS15005;old_locus_tag=C9E97_15340
NZ_PYKA01000109.1	Protein Homology	CDS	32464	33639	.	+	0	ID=cds-WP_001170618.1;Parent=gene-C9E97_RS15005;Dbxref=GenBank:WP_001170618.1;Name=WP_001170618.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460428.1;locus_tag=C9E97_RS15005;product=mannose-6-phosphate isomerase;protein_id=WP_001170618.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	33742	35250	.	+	.	ID=gene-C9E97_RS15010;Name=C9E97_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15010;old_locus_tag=C9E97_15345
NZ_PYKA01000109.1	Protein Homology	CDS	33742	35250	.	+	0	ID=cds-WP_135369664.1;Parent=gene-C9E97_RS15010;Dbxref=GenBank:WP_135369664.1;Name=WP_135369664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460427.1;locus_tag=C9E97_RS15010;product=YdgA family protein;protein_id=WP_135369664.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	pseudogene	35308	35910	.	-	.	ID=gene-C9E97_RS15015;Name=malI;end_range=35910,.;gbkey=Gene;gene=malI;gene_biotype=pseudogene;locus_tag=C9E97_RS15015;old_locus_tag=C9E97_15350;partial=true;pseudo=true
NZ_PYKA01000109.1	Protein Homology	CDS	35308	35910	.	-	0	ID=cds-C9E97_RS15015;Parent=gene-C9E97_RS15015;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677;end_range=35910,.;gbkey=CDS;gene=malI;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416137.1;locus_tag=C9E97_RS15015;partial=true;product=Mal regulon transcriptional regulator MalI;pseudo=true;transl_table=11
NZ_PYKA01000109.1	RefSeq	pseudogene	35929	36303	.	+	.	ID=gene-C9E97_RS15020;Name=C9E97_RS15020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS15020;old_locus_tag=C9E97_15355;partial=true;pseudo=true;start_range=.,35929
NZ_PYKA01000109.1	Protein Homology	CDS	35929	36303	.	+	0	ID=cds-C9E97_RS15020;Parent=gene-C9E97_RS15020;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310357.1;locus_tag=C9E97_RS15020;partial=true;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;pseudo=true;start_range=.,35929;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	36521	37522	.	+	.	ID=gene-C9E97_RS15025;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=C9E97_RS15025;old_locus_tag=C9E97_15360
NZ_PYKA01000109.1	Protein Homology	CDS	36521	37522	.	+	0	ID=cds-WP_001649586.1;Parent=gene-C9E97_RS15025;Dbxref=GenBank:WP_001649586.1;Name=WP_001649586.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460426.1;locus_tag=C9E97_RS15025;product=adenosine deaminase;protein_id=WP_001649586.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	37596	38636	.	-	.	ID=gene-C9E97_RS15030;Name=C9E97_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15030;old_locus_tag=C9E97_15365
NZ_PYKA01000109.1	Protein Homology	CDS	37596	38636	.	-	0	ID=cds-WP_000998242.1;Parent=gene-C9E97_RS15030;Dbxref=GenBank:WP_000998242.1;Name=WP_000998242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=C9E97_RS15030;product=oxidoreductase;protein_id=WP_000998242.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	38844	38969	.	+	.	ID=gene-C9E97_RS15035;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=C9E97_RS15035;old_locus_tag=C9E97_15370
NZ_PYKA01000109.1	Protein Homology	CDS	38844	38969	.	+	0	ID=cds-WP_001708800.1;Parent=gene-C9E97_RS15035;Dbxref=GenBank:WP_001708800.1;Name=WP_001708800.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=C9E97_RS15035;product=division septum protein Blr;protein_id=WP_001708800.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	39267	39482	.	+	.	ID=gene-C9E97_RS15040;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=C9E97_RS15040;old_locus_tag=C9E97_15375
NZ_PYKA01000109.1	Protein Homology	CDS	39267	39482	.	+	0	ID=cds-WP_000217946.1;Parent=gene-C9E97_RS15040;Dbxref=GenBank:WP_000217946.1;Name=WP_000217946.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460424.3;locus_tag=C9E97_RS15040;product=transcription modulator YdgT;protein_id=WP_000217946.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	39571	40011	.	+	.	ID=gene-C9E97_RS15045;Name=C9E97_RS15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15045;old_locus_tag=C9E97_15380
NZ_PYKA01000109.1	Protein Homology	CDS	39571	40011	.	+	0	ID=cds-WP_000214061.1;Parent=gene-C9E97_RS15045;Dbxref=GenBank:WP_000214061.1;Name=WP_000214061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460423.1;locus_tag=C9E97_RS15045;product=DUF2569 domain-containing protein;protein_id=WP_000214061.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	40088	40669	.	+	.	ID=gene-C9E97_RS15050;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=C9E97_RS15050;old_locus_tag=C9E97_15385
NZ_PYKA01000109.1	Protein Homology	CDS	40088	40669	.	+	0	ID=cds-WP_000133179.1;Parent=gene-C9E97_RS15050;Dbxref=GenBank:WP_000133179.1;Name=WP_000133179.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=C9E97_RS15050;product=electron transport complex subunit RsxA;protein_id=WP_000133179.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	40669	41247	.	+	.	ID=gene-C9E97_RS15055;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=C9E97_RS15055;old_locus_tag=C9E97_15390
NZ_PYKA01000109.1	Protein Homology	CDS	40669	41247	.	+	0	ID=cds-WP_001092597.1;Parent=gene-C9E97_RS15055;Dbxref=GenBank:WP_001092597.1;Name=WP_001092597.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460421.1;locus_tag=C9E97_RS15055;product=electron transport complex subunit RsxB;protein_id=WP_001092597.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	41240	43261	.	+	.	ID=gene-C9E97_RS15060;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=C9E97_RS15060;old_locus_tag=C9E97_15395
NZ_PYKA01000109.1	Protein Homology	CDS	41240	43261	.	+	0	ID=cds-WP_135495730.1;Parent=gene-C9E97_RS15060;Dbxref=GenBank:WP_135495730.1;Name=WP_135495730.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539956.1;locus_tag=C9E97_RS15060;product=electron transport complex subunit RsxC;protein_id=WP_135495730.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	43262	44320	.	+	.	ID=gene-C9E97_RS15065;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=C9E97_RS15065;old_locus_tag=C9E97_15400
NZ_PYKA01000109.1	Protein Homology	CDS	43262	44320	.	+	0	ID=cds-WP_000231891.1;Parent=gene-C9E97_RS15065;Dbxref=GenBank:WP_000231891.1;Name=WP_000231891.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460419.1;locus_tag=C9E97_RS15065;product=electron transport complex subunit RsxD;protein_id=WP_000231891.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	44324	44944	.	+	.	ID=gene-C9E97_RS15070;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=C9E97_RS15070;old_locus_tag=C9E97_15405
NZ_PYKA01000109.1	Protein Homology	CDS	44324	44944	.	+	0	ID=cds-WP_000920822.1;Parent=gene-C9E97_RS15070;Dbxref=GenBank:WP_000920822.1;Name=WP_000920822.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460418.1;locus_tag=C9E97_RS15070;product=electron transport complex subunit RsxG;protein_id=WP_000920822.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	44947	45639	.	+	.	ID=gene-C9E97_RS15075;Name=C9E97_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15075;old_locus_tag=C9E97_15410
NZ_PYKA01000109.1	Protein Homology	CDS	44947	45639	.	+	0	ID=cds-WP_001289628.1;Parent=gene-C9E97_RS15075;Dbxref=GenBank:WP_001289628.1;Name=WP_001289628.1;Ontology_term=GO:0022900;gbkey=CDS;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460417.1;locus_tag=C9E97_RS15075;product=electron transport complex subunit E;protein_id=WP_001289628.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	45639	46274	.	+	.	ID=gene-C9E97_RS15080;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=C9E97_RS15080;old_locus_tag=C9E97_15415
NZ_PYKA01000109.1	Protein Homology	CDS	45639	46274	.	+	0	ID=cds-WP_001030318.1;Parent=gene-C9E97_RS15080;Dbxref=GenBank:WP_001030318.1;Name=WP_001030318.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=C9E97_RS15080;product=endonuclease III;protein_id=WP_001030318.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	46876	48381	.	+	.	ID=gene-C9E97_RS15085;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=C9E97_RS15085;old_locus_tag=C9E97_15420
NZ_PYKA01000109.1	Protein Homology	CDS	46876	48381	.	+	0	ID=cds-WP_000100911.1;Parent=gene-C9E97_RS15085;Dbxref=GenBank:WP_000100911.1;Name=WP_000100911.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460415.1;locus_tag=C9E97_RS15085;product=dipeptide/tripeptide permease DtpA;protein_id=WP_000100911.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	48486	49091	.	+	.	ID=gene-C9E97_RS15090;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=C9E97_RS15090;old_locus_tag=C9E97_15425
NZ_PYKA01000109.1	Protein Homology	CDS	48486	49091	.	+	0	ID=cds-WP_000765727.1;Parent=gene-C9E97_RS15090;Dbxref=GenBank:WP_000765727.1;Name=WP_000765727.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460414.1;locus_tag=C9E97_RS15090;product=glutathione transferase GstA;protein_id=WP_000765727.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	49150	50010	.	-	.	ID=gene-C9E97_RS15095;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=C9E97_RS15095;old_locus_tag=C9E97_15430
NZ_PYKA01000109.1	Protein Homology	CDS	49150	50010	.	-	0	ID=cds-WP_000789736.1;Parent=gene-C9E97_RS15095;Dbxref=GenBank:WP_000789736.1;Name=WP_000789736.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460413.1;locus_tag=C9E97_RS15095;product=pyridoxal kinase PdxY;protein_id=WP_000789736.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	50070	51344	.	-	.	ID=gene-C9E97_RS15100;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=C9E97_RS15100;old_locus_tag=C9E97_15435
NZ_PYKA01000109.1	Protein Homology	CDS	50070	51344	.	-	0	ID=cds-WP_000168626.1;Parent=gene-C9E97_RS15100;Dbxref=GenBank:WP_000168626.1;Name=WP_000168626.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=C9E97_RS15100;product=tyrosine--tRNA ligase;protein_id=WP_000168626.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	51471	52127	.	-	.	ID=gene-C9E97_RS15105;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=C9E97_RS15105;old_locus_tag=C9E97_15440
NZ_PYKA01000109.1	Protein Homology	CDS	51471	52127	.	-	0	ID=cds-WP_001282334.1;Parent=gene-C9E97_RS15105;Dbxref=GenBank:WP_001282334.1;Name=WP_001282334.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=C9E97_RS15105;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282334.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	52186	52515	.	-	.	ID=gene-C9E97_RS15110;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=C9E97_RS15110;old_locus_tag=C9E97_15445
NZ_PYKA01000109.1	Protein Homology	CDS	52186	52515	.	-	0	ID=cds-WP_001132086.1;Parent=gene-C9E97_RS15110;Dbxref=GenBank:WP_001132086.1;Name=WP_001132086.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460410.1;locus_tag=C9E97_RS15110;product=C-type lysozyme inhibitor;protein_id=WP_001132086.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	52603	53724	.	-	.	ID=gene-C9E97_RS15115;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=C9E97_RS15115;old_locus_tag=C9E97_15450
NZ_PYKA01000109.1	Protein Homology	CDS	52603	53724	.	-	0	ID=cds-WP_000835021.1;Parent=gene-C9E97_RS15115;Dbxref=GenBank:WP_000835021.1;Name=WP_000835021.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460409.1;locus_tag=C9E97_RS15115;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_000835021.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	53997	54464	.	+	.	ID=gene-C9E97_RS15120;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=C9E97_RS15120;old_locus_tag=C9E97_15455
NZ_PYKA01000109.1	Protein Homology	CDS	53997	54464	.	+	0	ID=cds-WP_000597179.1;Parent=gene-C9E97_RS15120;Dbxref=GenBank:WP_000597179.1;Name=WP_000597179.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460408.1;locus_tag=C9E97_RS15120;product=outer membrane lipoprotein SlyB;protein_id=WP_000597179.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	54512	54952	.	-	.	ID=gene-C9E97_RS15125;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=C9E97_RS15125;old_locus_tag=C9E97_15460
NZ_PYKA01000109.1	Protein Homology	CDS	54512	54952	.	-	0	ID=cds-WP_000764551.1;Parent=gene-C9E97_RS15125;Dbxref=GenBank:WP_000764551.1;Name=WP_000764551.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=C9E97_RS15125;product=transcriptional regulator SlyA;protein_id=WP_000764551.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	55147	55383	.	+	.	ID=gene-C9E97_RS15130;Name=C9E97_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15130;old_locus_tag=C9E97_15465
NZ_PYKA01000109.1	Protein Homology	CDS	55147	55383	.	+	0	ID=cds-WP_000649755.1;Parent=gene-C9E97_RS15130;Dbxref=GenBank:WP_000649755.1;Name=WP_000649755.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460406.1;locus_tag=C9E97_RS15130;product=DUF1656 domain-containing protein;protein_id=WP_000649755.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	55386	56246	.	+	.	ID=gene-C9E97_RS15135;Name=C9E97_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15135;old_locus_tag=C9E97_15470
NZ_PYKA01000109.1	Protein Homology	CDS	55386	56246	.	+	0	ID=cds-WP_206188111.1;Parent=gene-C9E97_RS15135;Dbxref=GenBank:WP_206188111.1;Name=WP_206188111.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218841.1;locus_tag=C9E97_RS15135;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_206188111.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	56246	58285	.	+	.	ID=gene-C9E97_RS15140;Name=C9E97_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15140;old_locus_tag=C9E97_15475
NZ_PYKA01000109.1	Protein Homology	CDS	56246	58285	.	+	0	ID=cds-WP_000777625.1;Parent=gene-C9E97_RS15140;Dbxref=GenBank:WP_000777625.1;Name=WP_000777625.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460404.1;locus_tag=C9E97_RS15140;product=FUSC family protein;protein_id=WP_000777625.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	58261	58782	.	-	.	ID=gene-C9E97_RS15145;Name=sodC2;gbkey=Gene;gene=sodC2;gene_biotype=protein_coding;gene_synonym=sodCII;locus_tag=C9E97_RS15145;old_locus_tag=C9E97_15480
NZ_PYKA01000109.1	Protein Homology	CDS	58261	58782	.	-	0	ID=cds-WP_000826820.1;Parent=gene-C9E97_RS15145;Dbxref=GenBank:WP_000826820.1;Name=WP_000826820.1;gbkey=CDS;gene=sodC2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460403.1;locus_tag=C9E97_RS15145;product=superoxide dismutase [Cu-Zn] SodC2;protein_id=WP_000826820.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	58862	59758	.	-	.	ID=gene-C9E97_RS15150;Name=C9E97_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15150;old_locus_tag=C9E97_15485
NZ_PYKA01000109.1	Protein Homology	CDS	58862	59758	.	-	0	ID=cds-WP_000250721.1;Parent=gene-C9E97_RS15150;Dbxref=GenBank:WP_000250721.1;Name=WP_000250721.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460402.1;locus_tag=C9E97_RS15150;product=aldo/keto reductase;protein_id=WP_000250721.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	59809	60048	.	-	.	ID=gene-C9E97_RS15155;Name=C9E97_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15155;old_locus_tag=C9E97_15490
NZ_PYKA01000109.1	Protein Homology	CDS	59809	60048	.	-	0	ID=cds-WP_001538148.1;Parent=gene-C9E97_RS15155;Dbxref=GenBank:WP_001538148.1;Name=WP_001538148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460401.1;locus_tag=C9E97_RS15155;product=DUF1289 domain-containing protein;protein_id=WP_001538148.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	60151	60750	.	+	.	ID=gene-C9E97_RS15160;Name=C9E97_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15160;old_locus_tag=C9E97_15495
NZ_PYKA01000109.1	Protein Homology	CDS	60151	60750	.	+	0	ID=cds-WP_001660120.1;Parent=gene-C9E97_RS15160;Dbxref=GenBank:WP_001660120.1;Name=WP_001660120.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460400.1;locus_tag=C9E97_RS15160;product=TetR/AcrR family transcriptional regulator;protein_id=WP_001660120.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	60809	61906	.	+	.	ID=gene-C9E97_RS15165;Name=C9E97_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15165;old_locus_tag=C9E97_15500
NZ_PYKA01000109.1	Protein Homology	CDS	60809	61906	.	+	0	ID=cds-WP_135369644.1;Parent=gene-C9E97_RS15165;Dbxref=GenBank:WP_135369644.1;Name=WP_135369644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460399.1;locus_tag=C9E97_RS15165;product=alkene reductase;protein_id=WP_135369644.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	61975	62382	.	+	.	ID=gene-C9E97_RS15170;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=C9E97_RS15170;old_locus_tag=C9E97_15505
NZ_PYKA01000109.1	Protein Homology	CDS	61975	62382	.	+	0	ID=cds-WP_001237787.1;Parent=gene-C9E97_RS15170;Dbxref=GenBank:WP_001237787.1;Name=WP_001237787.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=C9E97_RS15170;product=lactoylglutathione lyase;protein_id=WP_001237787.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	62483	63130	.	+	.	ID=gene-C9E97_RS15175;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=C9E97_RS15175;old_locus_tag=C9E97_15510
NZ_PYKA01000109.1	Protein Homology	CDS	62483	63130	.	+	0	ID=cds-WP_001282267.1;Parent=gene-C9E97_RS15175;Dbxref=GenBank:WP_001282267.1;Name=WP_001282267.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460397.1;locus_tag=C9E97_RS15175;product=ribonuclease T;protein_id=WP_001282267.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	63208	63555	.	-	.	ID=gene-C9E97_RS15185;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=C9E97_RS15185;old_locus_tag=C9E97_15520
NZ_PYKA01000109.1	Protein Homology	CDS	63208	63555	.	-	0	ID=cds-WP_000108176.1;Parent=gene-C9E97_RS15185;Dbxref=GenBank:WP_000108176.1;Name=WP_000108176.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460396.1;locus_tag=C9E97_RS15185;product=monothiol glutaredoxin 4;protein_id=WP_000108176.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	63890	64711	.	+	.	ID=gene-C9E97_RS15190;Name=C9E97_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15190;old_locus_tag=C9E97_15525
NZ_PYKA01000109.1	Protein Homology	CDS	63890	64711	.	+	0	ID=cds-WP_206188112.1;Parent=gene-C9E97_RS15190;Dbxref=GenBank:WP_206188112.1;Name=WP_206188112.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310391.1;locus_tag=C9E97_RS15190;product=C40 family peptidase;protein_id=WP_206188112.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	64838	65419	.	+	.	ID=gene-C9E97_RS15195;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=C9E97_RS15195;old_locus_tag=C9E97_15530
NZ_PYKA01000109.1	Protein Homology	CDS	64838	65419	.	+	0	ID=cds-WP_135369642.1;Parent=gene-C9E97_RS15195;Dbxref=GenBank:WP_135369642.1;Name=WP_135369642.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460394.1;locus_tag=C9E97_RS15195;product=superoxide dismutase [Fe];protein_id=WP_135369642.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	65502	65591	.	-	.	ID=gene-C9E97_RS15200;Name=C9E97_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15200;old_locus_tag=C9E97_15535
NZ_PYKA01000109.1	Protein Homology	CDS	65502	65591	.	-	0	ID=cds-WP_000102277.1;Parent=gene-C9E97_RS15200;Dbxref=GenBank:WP_000102277.1;Name=WP_000102277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=C9E97_RS15200;product=YnhF family membrane protein;protein_id=WP_000102277.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	65887	66912	.	+	.	ID=gene-C9E97_RS15205;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=C9E97_RS15205;old_locus_tag=C9E97_15545
NZ_PYKA01000109.1	Protein Homology	CDS	65887	66912	.	+	0	ID=cds-WP_000190993.1;Parent=gene-C9E97_RS15205;Dbxref=GenBank:WP_000190993.1;Name=WP_000190993.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=C9E97_RS15205;product=HTH-type transcriptional repressor PurR;protein_id=WP_000190993.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	66909	67841	.	-	.	ID=gene-C9E97_RS15210;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=C9E97_RS15210;old_locus_tag=C9E97_15550
NZ_PYKA01000109.1	Protein Homology	CDS	66909	67841	.	-	0	ID=cds-WP_000269523.1;Parent=gene-C9E97_RS15210;Dbxref=GenBank:WP_000269523.1;Name=WP_000269523.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=C9E97_RS15210;product=DNA-binding transcriptional activator PunR;protein_id=WP_000269523.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	67954	69159	.	+	.	ID=gene-C9E97_RS15215;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=C9E97_RS15215;old_locus_tag=C9E97_15555
NZ_PYKA01000109.1	Protein Homology	CDS	67954	69159	.	+	0	ID=cds-WP_001182316.1;Parent=gene-C9E97_RS15215;Dbxref=GenBank:WP_001182316.1;Name=WP_001182316.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460391.1;locus_tag=C9E97_RS15215;product=purine nucleoside transporter PunC;protein_id=WP_001182316.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	69449	70597	.	+	.	ID=gene-C9E97_RS15220;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=C9E97_RS15220;old_locus_tag=C9E97_15560
NZ_PYKA01000109.1	Protein Homology	CDS	69449	70597	.	+	0	ID=cds-WP_000098878.1;Parent=gene-C9E97_RS15220;Dbxref=GenBank:WP_000098878.1;Name=WP_000098878.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460390.1;locus_tag=C9E97_RS15220;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_000098878.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	70639	71280	.	-	.	ID=gene-C9E97_RS15225;Name=C9E97_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15225;old_locus_tag=C9E97_15565
NZ_PYKA01000109.1	Protein Homology	CDS	70639	71280	.	-	0	ID=cds-WP_135369641.1;Parent=gene-C9E97_RS15225;Dbxref=GenBank:WP_135369641.1;Name=WP_135369641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460389.1;locus_tag=C9E97_RS15225;product=riboflavin synthase subunit alpha;protein_id=WP_135369641.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	71497	72870	.	+	.	ID=gene-C9E97_RS15230;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=C9E97_RS15230;old_locus_tag=C9E97_15570
NZ_PYKA01000109.1	Protein Homology	CDS	71497	72870	.	+	0	ID=cds-WP_001175077.1;Parent=gene-C9E97_RS15230;Dbxref=GenBank:WP_001175077.1;Name=WP_001175077.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460388.2;locus_tag=C9E97_RS15230;product=multidrug efflux MATE transporter MdtK;protein_id=WP_001175077.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	73022	73098	.	+	.	ID=gene-C9E97_RS15235;Name=C9E97_RS15235;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS15235;old_locus_tag=C9E97_15575
NZ_PYKA01000109.1	tRNAscan-SE	tRNA	73022	73098	.	+	.	ID=rna-C9E97_RS15235;Parent=gene-C9E97_RS15235;anticodon=(pos:73056..73058);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS15235;product=tRNA-Val
NZ_PYKA01000109.1	tRNAscan-SE	exon	73022	73098	.	+	.	ID=exon-C9E97_RS15235-1;Parent=rna-C9E97_RS15235;anticodon=(pos:73056..73058);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS15235;product=tRNA-Val
NZ_PYKA01000109.1	RefSeq	gene	73109	73185	.	+	.	ID=gene-C9E97_RS15240;Name=C9E97_RS15240;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS15240;old_locus_tag=C9E97_15580
NZ_PYKA01000109.1	tRNAscan-SE	tRNA	73109	73185	.	+	.	ID=rna-C9E97_RS15240;Parent=gene-C9E97_RS15240;anticodon=(pos:73143..73145);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS15240;product=tRNA-Val
NZ_PYKA01000109.1	tRNAscan-SE	exon	73109	73185	.	+	.	ID=exon-C9E97_RS15240-1;Parent=rna-C9E97_RS15240;anticodon=(pos:73143..73145);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS15240;product=tRNA-Val
NZ_PYKA01000109.1	RefSeq	gene	73342	74400	.	-	.	ID=gene-C9E97_RS15245;Name=ssaU;gbkey=Gene;gene=ssaU;gene_biotype=protein_coding;locus_tag=C9E97_RS15245;old_locus_tag=C9E97_15585
NZ_PYKA01000109.1	Protein Homology	CDS	73342	74400	.	-	0	ID=cds-WP_001291715.1;Parent=gene-C9E97_RS15245;Dbxref=GenBank:WP_001291715.1;Name=WP_001291715.1;gbkey=CDS;gene=ssaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460387.1;locus_tag=C9E97_RS15245;product=SPI-2 type III secretion system apparatus protein SsaU;protein_id=WP_001291715.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	74397	75176	.	-	.	ID=gene-C9E97_RS15250;Name=ssaT;gbkey=Gene;gene=ssaT;gene_biotype=protein_coding;locus_tag=C9E97_RS15250;old_locus_tag=C9E97_15590
NZ_PYKA01000109.1	Protein Homology	CDS	74397	75176	.	-	0	ID=cds-WP_000068762.1;Parent=gene-C9E97_RS15250;Dbxref=GenBank:WP_000068762.1;Name=WP_000068762.1;gbkey=CDS;gene=ssaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460386.1;locus_tag=C9E97_RS15250;product=SPI-2 type III secretion system apparatus protein SsaT;protein_id=WP_000068762.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	75177	75443	.	-	.	ID=gene-C9E97_RS15255;Name=ssas;gbkey=Gene;gene=ssas;gene_biotype=protein_coding;locus_tag=C9E97_RS15255;old_locus_tag=C9E97_15595
NZ_PYKA01000109.1	Protein Homology	CDS	75177	75443	.	-	0	ID=cds-WP_000999982.1;Parent=gene-C9E97_RS15255;Dbxref=GenBank:WP_000999982.1;Name=WP_000999982.1;gbkey=CDS;gene=ssas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460385.1;locus_tag=C9E97_RS15255;product=SPI-2 type III secretion system apparatus protein SsaS;protein_id=WP_000999982.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	75440	76087	.	-	.	ID=gene-C9E97_RS15260;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;locus_tag=C9E97_RS15260;old_locus_tag=C9E97_15600
NZ_PYKA01000109.1	Protein Homology	CDS	75440	76087	.	-	0	ID=cds-WP_000056367.1;Parent=gene-C9E97_RS15260;Dbxref=GenBank:WP_000056367.1;Name=WP_000056367.1;gbkey=CDS;gene=ssaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460384.1;locus_tag=C9E97_RS15260;product=SPI-2 type III secretion system export apparatus protein SsaR;protein_id=WP_000056367.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	76155	77123	.	-	.	ID=gene-C9E97_RS15265;Name=ssaQ;gbkey=Gene;gene=ssaQ;gene_biotype=protein_coding;locus_tag=C9E97_RS15265;old_locus_tag=C9E97_15605
NZ_PYKA01000109.1	Protein Homology	CDS	76155	77123	.	-	0	ID=cds-WP_135369640.1;Parent=gene-C9E97_RS15265;Dbxref=GenBank:WP_135369640.1;Name=WP_135369640.1;gbkey=CDS;gene=ssaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460383.1;locus_tag=C9E97_RS15265;product=SPI-2 type III secretion system cytoplasmic ring protein SsaQ;protein_id=WP_135369640.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	77104	77478	.	-	.	ID=gene-C9E97_RS15270;Name=ssaP;gbkey=Gene;gene=ssaP;gene_biotype=protein_coding;locus_tag=C9E97_RS15270;old_locus_tag=C9E97_15610
NZ_PYKA01000109.1	Protein Homology	CDS	77104	77478	.	-	0	ID=cds-WP_076735671.1;Parent=gene-C9E97_RS15270;Dbxref=GenBank:WP_076735671.1;Name=WP_076735671.1;gbkey=CDS;gene=ssaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460382.1;locus_tag=C9E97_RS15270;product=SPI-2 type III secretion system apparatus protein SsaP;protein_id=WP_076735671.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	77459	77836	.	-	.	ID=gene-C9E97_RS15275;Name=ssaO;gbkey=Gene;gene=ssaO;gene_biotype=protein_coding;locus_tag=C9E97_RS15275;old_locus_tag=C9E97_15615
NZ_PYKA01000109.1	Protein Homology	CDS	77459	77836	.	-	0	ID=cds-WP_135369639.1;Parent=gene-C9E97_RS15275;Dbxref=GenBank:WP_135369639.1;Name=WP_135369639.1;gbkey=CDS;gene=ssaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460381.1;locus_tag=C9E97_RS15275;product=SPI-2 type III secretion system apparatus protein SsaO;protein_id=WP_135369639.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	77839	79140	.	-	.	ID=gene-C9E97_RS15280;Name=ssaN;gbkey=Gene;gene=ssaN;gene_biotype=protein_coding;locus_tag=C9E97_RS15280;old_locus_tag=C9E97_15620
NZ_PYKA01000109.1	Protein Homology	CDS	77839	79140	.	-	0	ID=cds-WP_000787210.1;Parent=gene-C9E97_RS15280;Dbxref=GenBank:WP_000787210.1;Name=WP_000787210.1;gbkey=CDS;gene=ssaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460380.1;locus_tag=C9E97_RS15280;product=SctN family type III secretion system ATPase SsaN;protein_id=WP_000787210.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	79130	81175	.	-	.	ID=gene-C9E97_RS15285;Name=ssaV;gbkey=Gene;gene=ssaV;gene_biotype=protein_coding;locus_tag=C9E97_RS15285;old_locus_tag=C9E97_15625
NZ_PYKA01000109.1	Protein Homology	CDS	79130	81175	.	-	0	ID=cds-WP_001258221.1;Parent=gene-C9E97_RS15285;Dbxref=GenBank:WP_001258221.1;Name=WP_001258221.1;gbkey=CDS;gene=ssaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460379.1;locus_tag=C9E97_RS15285;product=SPI-2 type III secretion system apparatus protein SsaV;protein_id=WP_001258221.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	81160	81528	.	-	.	ID=gene-C9E97_RS15290;Name=ssaM;gbkey=Gene;gene=ssaM;gene_biotype=protein_coding;locus_tag=C9E97_RS15290;old_locus_tag=C9E97_15630
NZ_PYKA01000109.1	Protein Homology	CDS	81160	81528	.	-	0	ID=cds-WP_000383700.1;Parent=gene-C9E97_RS15290;Dbxref=GenBank:WP_000383700.1;Name=WP_000383700.1;gbkey=CDS;gene=ssaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460378.1;locus_tag=C9E97_RS15290;product=SPI-2 type III secretion system apparatus protein SsaM;protein_id=WP_000383700.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	81586	82602	.	-	.	ID=gene-C9E97_RS15295;Name=ssaL;gbkey=Gene;gene=ssaL;gene_biotype=protein_coding;locus_tag=C9E97_RS15295;old_locus_tag=C9E97_15635
NZ_PYKA01000109.1	Protein Homology	CDS	81586	82602	.	-	0	ID=cds-WP_135369638.1;Parent=gene-C9E97_RS15295;Dbxref=GenBank:WP_135369638.1;Name=WP_135369638.1;gbkey=CDS;gene=ssaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460377.1;locus_tag=C9E97_RS15295;product=SPI-2 type III secretion system apparatus protein SsaL;protein_id=WP_135369638.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	82568	83242	.	-	.	ID=gene-C9E97_RS15300;Name=ssaK;gbkey=Gene;gene=ssaK;gene_biotype=protein_coding;locus_tag=C9E97_RS15300;old_locus_tag=C9E97_15640
NZ_PYKA01000109.1	Protein Homology	CDS	82568	83242	.	-	0	ID=cds-WP_135369637.1;Parent=gene-C9E97_RS15300;Dbxref=GenBank:WP_135369637.1;Name=WP_135369637.1;gbkey=CDS;gene=ssaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460376.1;locus_tag=C9E97_RS15300;product=SPI-2 type III secretion system apparatus protein SsaK;protein_id=WP_135369637.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	83239	83787	.	-	.	ID=gene-C9E97_RS15305;Name=C9E97_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15305;old_locus_tag=C9E97_15645
NZ_PYKA01000109.1	Protein Homology	CDS	83239	83787	.	-	0	ID=cds-WP_001531605.1;Parent=gene-C9E97_RS15305;Dbxref=GenBank:WP_001531605.1;Name=WP_001531605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460375.1;locus_tag=C9E97_RS15305;product=type III secretion system domain-containing protein;protein_id=WP_001531605.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	83805	84554	.	-	.	ID=gene-C9E97_RS15310;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=protein_coding;locus_tag=C9E97_RS15310;old_locus_tag=C9E97_15650
NZ_PYKA01000109.1	Protein Homology	CDS	83805	84554	.	-	0	ID=cds-WP_023258851.1;Parent=gene-C9E97_RS15310;Dbxref=GenBank:WP_023258851.1;Name=WP_023258851.1;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460374.1;locus_tag=C9E97_RS15310;product=SPI-2 type III secretion system apparatus lipoprotein SsaJ;protein_id=WP_023258851.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	84551	84799	.	-	.	ID=gene-C9E97_RS15315;Name=ssaI;gbkey=Gene;gene=ssaI;gene_biotype=protein_coding;locus_tag=C9E97_RS15315;old_locus_tag=C9E97_15655
NZ_PYKA01000109.1	Protein Homology	CDS	84551	84799	.	-	0	ID=cds-WP_001562742.1;Parent=gene-C9E97_RS15315;Dbxref=GenBank:WP_001562742.1;Name=WP_001562742.1;gbkey=CDS;gene=ssaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562742.1;locus_tag=C9E97_RS15315;product=SctI family type III secretion system inner rod subunit SsaI;protein_id=WP_001562742.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	84811	85101	.	-	.	ID=gene-C9E97_RS15320;Name=C9E97_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15320;old_locus_tag=C9E97_15660
NZ_PYKA01000109.1	Protein Homology	CDS	84811	85101	.	-	0	ID=cds-WP_000444713.1;Parent=gene-C9E97_RS15320;Dbxref=GenBank:WP_000444713.1;Name=WP_000444713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531123.1;locus_tag=C9E97_RS15320;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=WP_000444713.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	85079	85294	.	-	.	ID=gene-C9E97_RS15325;Name=ssaG;gbkey=Gene;gene=ssaG;gene_biotype=protein_coding;locus_tag=C9E97_RS15325;old_locus_tag=C9E97_15665
NZ_PYKA01000109.1	Protein Homology	CDS	85079	85294	.	-	0	ID=cds-WP_000350226.1;Parent=gene-C9E97_RS15325;Dbxref=GenBank:WP_000350226.1;Name=WP_000350226.1;gbkey=CDS;gene=ssaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460371.1;locus_tag=C9E97_RS15325;product=type III secretion system needle filament protein SsaG;protein_id=WP_000350226.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	85388	86077	.	-	.	ID=gene-C9E97_RS15330;Name=sseG;gbkey=Gene;gene=sseG;gene_biotype=protein_coding;locus_tag=C9E97_RS15330;old_locus_tag=C9E97_15670
NZ_PYKA01000109.1	Protein Homology	CDS	85388	86077	.	-	0	ID=cds-WP_135369636.1;Parent=gene-C9E97_RS15330;Dbxref=GenBank:WP_135369636.1;Name=WP_135369636.1;Note=SseG%2C from Salmonella pathogenicity island 2%2C is a type III secretion system (T3SS) effector protein.;gbkey=CDS;gene=sseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460370.1;locus_tag=C9E97_RS15330;product=pathogenicity island 2 effector protein SseG;protein_id=WP_135369636.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	86074	86856	.	-	.	ID=gene-C9E97_RS15335;Name=sseF;gbkey=Gene;gene=sseF;gene_biotype=protein_coding;locus_tag=C9E97_RS15335;old_locus_tag=C9E97_15675
NZ_PYKA01000109.1	Protein Homology	CDS	86074	86856	.	-	0	ID=cds-WP_031605377.1;Parent=gene-C9E97_RS15335;Dbxref=GenBank:WP_031605377.1;Name=WP_031605377.1;gbkey=CDS;gene=sseF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460369.1;locus_tag=C9E97_RS15335;product=type III secretion systems effector SseF;protein_id=WP_031605377.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	86872	87306	.	-	.	ID=gene-C9E97_RS15340;Name=sscB;gbkey=Gene;gene=sscB;gene_biotype=protein_coding;locus_tag=C9E97_RS15340;old_locus_tag=C9E97_15680
NZ_PYKA01000109.1	Protein Homology	CDS	86872	87306	.	-	0	ID=cds-WP_000979963.1;Parent=gene-C9E97_RS15340;Dbxref=GenBank:WP_000979963.1;Name=WP_000979963.1;gbkey=CDS;gene=sscB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460368.1;locus_tag=C9E97_RS15340;product=SycD/LcrH family type III secretion system chaperone SscB;protein_id=WP_000979963.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	87358	87774	.	-	.	ID=gene-C9E97_RS15345;Name=sseE;gbkey=Gene;gene=sseE;gene_biotype=protein_coding;locus_tag=C9E97_RS15345;old_locus_tag=C9E97_15685
NZ_PYKA01000109.1	Protein Homology	CDS	87358	87774	.	-	0	ID=cds-WP_000249606.1;Parent=gene-C9E97_RS15345;Dbxref=GenBank:WP_000249606.1;Name=WP_000249606.1;gbkey=CDS;gene=sseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460367.1;locus_tag=C9E97_RS15345;product=LcrR family type III secretion system chaperone SseE;protein_id=WP_000249606.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	87777	88364	.	-	.	ID=gene-C9E97_RS15350;Name=sseD;gbkey=Gene;gene=sseD;gene_biotype=protein_coding;locus_tag=C9E97_RS15350;old_locus_tag=C9E97_15690
NZ_PYKA01000109.1	Protein Homology	CDS	87777	88364	.	-	0	ID=cds-WP_135369511.1;Parent=gene-C9E97_RS15350;Dbxref=GenBank:WP_135369511.1;Name=WP_135369511.1;gbkey=CDS;gene=sseD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460366.1;locus_tag=C9E97_RS15350;product=SPI-2 type III secretion system translocon protein SseD;protein_id=WP_135369511.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	88380	89834	.	-	.	ID=gene-C9E97_RS15355;Name=sseC;gbkey=Gene;gene=sseC;gene_biotype=protein_coding;locus_tag=C9E97_RS15355;old_locus_tag=C9E97_15695
NZ_PYKA01000109.1	Protein Homology	CDS	88380	89834	.	-	0	ID=cds-WP_135369512.1;Parent=gene-C9E97_RS15355;Dbxref=GenBank:WP_135369512.1;Name=WP_135369512.1;gbkey=CDS;gene=sseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460365.1;locus_tag=C9E97_RS15355;product=SPI-2 type III secretion system translocon protein SseC;protein_id=WP_135369512.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	89837	90310	.	-	.	ID=gene-C9E97_RS15360;Name=sscA;gbkey=Gene;gene=sscA;gene_biotype=protein_coding;locus_tag=C9E97_RS15360;old_locus_tag=C9E97_15700
NZ_PYKA01000109.1	Protein Homology	CDS	89837	90310	.	-	0	ID=cds-WP_000711023.1;Parent=gene-C9E97_RS15360;Dbxref=GenBank:WP_000711023.1;Name=WP_000711023.1;gbkey=CDS;gene=sscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460364.1;locus_tag=C9E97_RS15360;product=SycD/LcrH family type III secretion system chaperone SscA;protein_id=WP_000711023.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	90307	90897	.	-	.	ID=gene-C9E97_RS15365;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=C9E97_RS15365;old_locus_tag=C9E97_15705
NZ_PYKA01000109.1	Protein Homology	CDS	90307	90897	.	-	0	ID=cds-WP_000094419.1;Parent=gene-C9E97_RS15365;Dbxref=GenBank:WP_000094419.1;Name=WP_000094419.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460363.1;locus_tag=C9E97_RS15365;product=SPI-2 type III secretion system translocon protein SseB;protein_id=WP_000094419.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	90904	91230	.	-	.	ID=gene-C9E97_RS15370;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=C9E97_RS15370;old_locus_tag=C9E97_15710
NZ_PYKA01000109.1	Protein Homology	CDS	90904	91230	.	-	0	ID=cds-WP_000972855.1;Parent=gene-C9E97_RS15370;Dbxref=GenBank:WP_000972855.1;Name=WP_000972855.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460362.1;locus_tag=C9E97_RS15370;product=SPI-2 type III secretion system chaperone SseA;protein_id=WP_000972855.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	91494	91736	.	-	.	ID=gene-C9E97_RS15375;Name=ssaE;gbkey=Gene;gene=ssaE;gene_biotype=protein_coding;locus_tag=C9E97_RS15375;old_locus_tag=C9E97_15715
NZ_PYKA01000109.1	Protein Homology	CDS	91494	91736	.	-	0	ID=cds-WP_080217535.1;Parent=gene-C9E97_RS15375;Dbxref=GenBank:WP_080217535.1;Name=WP_080217535.1;gbkey=CDS;gene=ssaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460361.1;locus_tag=C9E97_RS15375;product=YscE family type III secretion system co-chaperone SsaE;protein_id=WP_080217535.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	91744	92955	.	-	.	ID=gene-C9E97_RS15380;Name=ssaD;gbkey=Gene;gene=ssaD;gene_biotype=protein_coding;locus_tag=C9E97_RS15380;old_locus_tag=C9E97_15720
NZ_PYKA01000109.1	Protein Homology	CDS	91744	92955	.	-	0	ID=cds-WP_135369513.1;Parent=gene-C9E97_RS15380;Dbxref=GenBank:WP_135369513.1;Name=WP_135369513.1;gbkey=CDS;gene=ssaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460360.1;locus_tag=C9E97_RS15380;product=SctD family type III secretion system inner membrane ring subunit SsaD;protein_id=WP_135369513.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	92936	94429	.	-	.	ID=gene-C9E97_RS15385;Name=spiA;gbkey=Gene;gene=spiA;gene_biotype=protein_coding;locus_tag=C9E97_RS15385;old_locus_tag=C9E97_15725
NZ_PYKA01000109.1	Protein Homology	CDS	92936	94429	.	-	0	ID=cds-WP_000261287.1;Parent=gene-C9E97_RS15385;Dbxref=GenBank:WP_000261287.1;Name=WP_000261287.1;gbkey=CDS;gene=spiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460359.1;locus_tag=C9E97_RS15385;product=SPI-2 type III secretion system protein SpiA;protein_id=WP_000261287.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	94431	94832	.	-	.	ID=gene-C9E97_RS15390;Name=spiC;gbkey=Gene;gene=spiC;gene_biotype=protein_coding;locus_tag=C9E97_RS15390;old_locus_tag=C9E97_15730
NZ_PYKA01000109.1	Protein Homology	CDS	94431	94832	.	-	0	ID=cds-WP_001588845.1;Parent=gene-C9E97_RS15390;Dbxref=GenBank:WP_001588845.1;Name=WP_001588845.1;gbkey=CDS;gene=spiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460358.1;locus_tag=C9E97_RS15390;product=SPI-2 type III secretion system protein SpiC;protein_id=WP_001588845.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	95233	97995	.	+	.	ID=gene-C9E97_RS15395;Name=C9E97_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15395;old_locus_tag=C9E97_15735
NZ_PYKA01000109.1	Protein Homology	CDS	95233	97995	.	+	0	ID=cds-WP_135369762.1;Parent=gene-C9E97_RS15395;Dbxref=GenBank:WP_135369762.1;Name=WP_135369762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460357.1;locus_tag=C9E97_RS15395;product=two component system sensor kinase;protein_id=WP_135369762.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	98026	98664	.	+	.	ID=gene-C9E97_RS15400;Name=C9E97_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15400;old_locus_tag=C9E97_15740
NZ_PYKA01000109.1	Protein Homology	CDS	98026	98664	.	+	0	ID=cds-WP_023234474.1;Parent=gene-C9E97_RS15400;Dbxref=GenBank:WP_023234474.1;Name=WP_023234474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460356.1;locus_tag=C9E97_RS15400;product=two component system response regulator;protein_id=WP_023234474.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	98843	99571	.	+	.	ID=gene-C9E97_RS15405;Name=C9E97_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15405;old_locus_tag=C9E97_15745
NZ_PYKA01000109.1	Protein Homology	CDS	98843	99571	.	+	0	ID=cds-WP_000122318.1;Parent=gene-C9E97_RS15405;Dbxref=GenBank:WP_000122318.1;Name=WP_000122318.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460355.1;locus_tag=C9E97_RS15405;product=MerR family transcriptional regulator;protein_id=WP_000122318.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	99743	100702	.	+	.	ID=gene-C9E97_RS15410;Name=mlrB;gbkey=Gene;gene=mlrB;gene_biotype=protein_coding;locus_tag=C9E97_RS15410;old_locus_tag=C9E97_15750
NZ_PYKA01000109.1	Protein Homology	CDS	99743	100702	.	+	0	ID=cds-WP_020839382.1;Parent=gene-C9E97_RS15410;Dbxref=GenBank:WP_020839382.1;Name=WP_020839382.1;gbkey=CDS;gene=mlrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460354.1;locus_tag=C9E97_RS15410;product=transcriptional regulator MlrB;protein_id=WP_020839382.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	100798	101010	.	-	.	ID=gene-C9E97_RS15415;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=C9E97_RS15415;old_locus_tag=C9E97_15755
NZ_PYKA01000109.1	Protein Homology	CDS	100798	101010	.	-	0	ID=cds-WP_000165779.1;Parent=gene-C9E97_RS15415;Dbxref=GenBank:WP_000165779.1;Name=WP_000165779.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460353.1;locus_tag=C9E97_RS15415;product=fumarate hydratase FumD;protein_id=WP_000165779.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	101108	101728	.	-	.	ID=gene-C9E97_RS15420;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=C9E97_RS15420;old_locus_tag=C9E97_15760
NZ_PYKA01000109.1	Protein Homology	CDS	101108	101728	.	-	0	ID=cds-WP_135369763.1;Parent=gene-C9E97_RS15420;Dbxref=GenBank:WP_135369763.1;Name=WP_135369763.1;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460352.3;locus_tag=C9E97_RS15420;product=tetrathionate respiration response regulator TtrR;protein_id=WP_135369763.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	101703	103481	.	-	.	ID=gene-C9E97_RS15425;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=C9E97_RS15425;old_locus_tag=C9E97_15765
NZ_PYKA01000109.1	Protein Homology	CDS	101703	103481	.	-	0	ID=cds-WP_135369764.1;Parent=gene-C9E97_RS15425;Dbxref=GenBank:WP_135369764.1;Name=WP_135369764.1;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=C9E97_RS15425;product=tetrathionate respiration histidine kinase TtrS;protein_id=WP_135369764.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	103663	104397	.	+	.	ID=gene-C9E97_RS15430;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=protein_coding;locus_tag=C9E97_RS15430;old_locus_tag=C9E97_15770
NZ_PYKA01000109.1	Protein Homology	CDS	103663	104397	.	+	0	ID=cds-WP_001523928.1;Parent=gene-C9E97_RS15430;Dbxref=GenBank:WP_001523928.1;Name=WP_001523928.1;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518945.1;locus_tag=C9E97_RS15430;product=tetrathionate reductase subunit TtrB;protein_id=WP_001523928.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	104398	105420	.	+	.	ID=gene-C9E97_RS15435;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=protein_coding;locus_tag=C9E97_RS15435;old_locus_tag=C9E97_15775
NZ_PYKA01000109.1	Protein Homology	CDS	104398	105420	.	+	0	ID=cds-WP_000149760.1;Parent=gene-C9E97_RS15435;Dbxref=GenBank:WP_000149760.1;Name=WP_000149760.1;gbkey=CDS;gene=ttrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460349.1;locus_tag=C9E97_RS15435;product=tetrathionate reductase subunit TtrC;protein_id=WP_000149760.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	105413	108475	.	+	.	ID=gene-C9E97_RS15440;Name=ttrA;gbkey=Gene;gene=ttrA;gene_biotype=protein_coding;locus_tag=C9E97_RS15440;old_locus_tag=C9E97_15780
NZ_PYKA01000109.1	Protein Homology	CDS	105413	108475	.	+	0	ID=cds-WP_058653057.1;Parent=gene-C9E97_RS15440;Dbxref=GenBank:WP_058653057.1;Name=WP_058653057.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;gene=ttrA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460348.1;locus_tag=C9E97_RS15440;product=tetrathionate reductase subunit TtrA;protein_id=WP_058653057.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	108798	110024	.	+	.	ID=gene-C9E97_RS15445;Name=C9E97_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15445;old_locus_tag=C9E97_15785
NZ_PYKA01000109.1	Protein Homology	CDS	108798	110024	.	+	0	ID=cds-WP_000471815.1;Parent=gene-C9E97_RS15445;Dbxref=GenBank:WP_000471815.1;Name=WP_000471815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460347.1;locus_tag=C9E97_RS15445;product=PfkB family carbohydrate kinase;protein_id=WP_000471815.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	110036	110773	.	+	.	ID=gene-C9E97_RS15450;Name=C9E97_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15450;old_locus_tag=C9E97_15790
NZ_PYKA01000109.1	Protein Homology	CDS	110036	110773	.	+	0	ID=cds-WP_000697187.1;Parent=gene-C9E97_RS15450;Dbxref=GenBank:WP_000697187.1;Name=WP_000697187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460346.1;locus_tag=C9E97_RS15450;product=glutamine amidotransferase;protein_id=WP_000697187.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	110832	111725	.	+	.	ID=gene-C9E97_RS15455;Name=C9E97_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15455;old_locus_tag=C9E97_15795
NZ_PYKA01000109.1	Protein Homology	CDS	110832	111725	.	+	0	ID=cds-WP_001000508.1;Parent=gene-C9E97_RS15455;Dbxref=GenBank:WP_001000508.1;Name=WP_001000508.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460345.1;locus_tag=C9E97_RS15455;product=proline iminopeptidase-family hydrolase;protein_id=WP_001000508.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	111747	113090	.	+	.	ID=gene-C9E97_RS15460;Name=C9E97_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15460;old_locus_tag=C9E97_15800
NZ_PYKA01000109.1	Protein Homology	CDS	111747	113090	.	+	0	ID=cds-WP_000756093.1;Parent=gene-C9E97_RS15460;Dbxref=GenBank:WP_000756093.1;Name=WP_000756093.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460344.1;locus_tag=C9E97_RS15460;product=APC family permease;protein_id=WP_000756093.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	113254	113484	.	+	.	ID=gene-C9E97_RS24075;Name=C9E97_RS24075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS24075
NZ_PYKA01000109.1	Protein Homology	CDS	113254	113484	.	+	0	ID=cds-WP_418143684.1;Parent=gene-C9E97_RS24075;Dbxref=GenBank:WP_418143684.1;Name=WP_418143684.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049534.1;locus_tag=C9E97_RS24075;product=hypothetical protein;protein_id=WP_418143684.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	113492	114904	.	+	.	ID=gene-C9E97_RS15465;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=C9E97_RS15465;old_locus_tag=C9E97_15810
NZ_PYKA01000109.1	Protein Homology	CDS	113492	114904	.	+	0	ID=cds-WP_000751447.1;Parent=gene-C9E97_RS15465;Dbxref=GenBank:WP_000751447.1;Name=WP_000751447.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=C9E97_RS15465;product=pyruvate kinase PykF;protein_id=WP_000751447.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	115215	115451	.	+	.	ID=gene-C9E97_RS15470;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=C9E97_RS15470;old_locus_tag=C9E97_15815
NZ_PYKA01000109.1	Protein Homology	CDS	115215	115451	.	+	0	ID=cds-WP_001082307.1;Parent=gene-C9E97_RS15470;Dbxref=GenBank:WP_001082307.1;Name=WP_001082307.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460342.1;locus_tag=C9E97_RS15470;product=murein lipoprotein Lpp;protein_id=WP_001082307.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	115534	115773	.	+	.	ID=gene-C9E97_RS15475;Name=C9E97_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15475;old_locus_tag=C9E97_15820
NZ_PYKA01000109.1	Protein Homology	CDS	115534	115773	.	+	0	ID=cds-WP_045720667.1;Parent=gene-C9E97_RS15475;Dbxref=GenBank:WP_045720667.1;Name=WP_045720667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082333.1;locus_tag=C9E97_RS15475;product=major outer membrane lipoprotein;protein_id=WP_045720667.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	115857	116096	.	+	.	ID=gene-C9E97_RS15480;Name=C9E97_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15480;old_locus_tag=C9E97_15825
NZ_PYKA01000109.1	Protein Homology	CDS	115857	116096	.	+	0	ID=cds-WP_017465453.1;Parent=gene-C9E97_RS15480;Dbxref=GenBank:WP_017465453.1;Name=WP_017465453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460341.1;locus_tag=C9E97_RS15480;product=major outer membrane lipoprotein;protein_id=WP_017465453.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	116163	117164	.	-	.	ID=gene-C9E97_RS15485;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;locus_tag=C9E97_RS15485;old_locus_tag=C9E97_15830
NZ_PYKA01000109.1	Protein Homology	CDS	116163	117164	.	-	0	ID=cds-WP_000817059.1;Parent=gene-C9E97_RS15485;Dbxref=GenBank:WP_000817059.1;Name=WP_000817059.1;Ontology_term=GO:0009252,GO:0018104,GO:0016757,GO:0071972;gbkey=CDS;gene=ldtE;go_function=glycosyltransferase activity|0016757||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460340.1;locus_tag=C9E97_RS15485;product=L%2CD-transpeptidase LdtE;protein_id=WP_000817059.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	117319	117735	.	-	.	ID=gene-C9E97_RS15490;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=C9E97_RS15490;old_locus_tag=C9E97_15835
NZ_PYKA01000109.1	Protein Homology	CDS	117319	117735	.	-	0	ID=cds-WP_000729470.1;Parent=gene-C9E97_RS15490;Dbxref=GenBank:WP_000729470.1;Name=WP_000729470.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460339.1;locus_tag=C9E97_RS15490;product=cysteine desulfuration protein SufE;protein_id=WP_000729470.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	117748	118968	.	-	.	ID=gene-C9E97_RS15495;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=C9E97_RS15495;old_locus_tag=C9E97_15840
NZ_PYKA01000109.1	Protein Homology	CDS	117748	118968	.	-	0	ID=cds-WP_000143859.1;Parent=gene-C9E97_RS15495;Dbxref=GenBank:WP_000143859.1;Name=WP_000143859.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460338.1;locus_tag=C9E97_RS15495;product=cysteine desulfurase SufS;protein_id=WP_000143859.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	118965	120236	.	-	.	ID=gene-C9E97_RS15500;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=C9E97_RS15500;old_locus_tag=C9E97_15845
NZ_PYKA01000109.1	Protein Homology	CDS	118965	120236	.	-	0	ID=cds-WP_135369765.1;Parent=gene-C9E97_RS15500;Dbxref=GenBank:WP_135369765.1;Name=WP_135369765.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460337.1;locus_tag=C9E97_RS15500;product=Fe-S cluster assembly protein SufD;protein_id=WP_135369765.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	120211	120957	.	-	.	ID=gene-C9E97_RS15505;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=C9E97_RS15505;old_locus_tag=C9E97_15850
NZ_PYKA01000109.1	Protein Homology	CDS	120211	120957	.	-	0	ID=cds-WP_000948902.1;Parent=gene-C9E97_RS15505;Dbxref=GenBank:WP_000948902.1;Name=WP_000948902.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=C9E97_RS15505;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_000948902.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	120974	122461	.	-	.	ID=gene-C9E97_RS15510;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=C9E97_RS15510;old_locus_tag=C9E97_15855
NZ_PYKA01000109.1	Protein Homology	CDS	120974	122461	.	-	0	ID=cds-WP_000089383.1;Parent=gene-C9E97_RS15510;Dbxref=GenBank:WP_000089383.1;Name=WP_000089383.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=C9E97_RS15510;product=Fe-S cluster assembly protein SufB;protein_id=WP_000089383.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	122470	122838	.	-	.	ID=gene-C9E97_RS15515;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=C9E97_RS15515;old_locus_tag=C9E97_15860
NZ_PYKA01000109.1	Protein Homology	CDS	122470	122838	.	-	0	ID=cds-WP_000418970.1;Parent=gene-C9E97_RS15515;Dbxref=GenBank:WP_000418970.1;Name=WP_000418970.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460334.1;locus_tag=C9E97_RS15515;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_000418970.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	123265	124611	.	+	.	ID=gene-C9E97_RS15520;Name=C9E97_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15520;old_locus_tag=C9E97_15865
NZ_PYKA01000109.1	Protein Homology	CDS	123265	124611	.	+	0	ID=cds-WP_079802032.1;Parent=gene-C9E97_RS15520;Dbxref=GenBank:WP_079802032.1;Name=WP_079802032.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460333.1;locus_tag=C9E97_RS15520;product=L-cystine transporter;protein_id=WP_079802032.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	124899	125087	.	-	.	ID=gene-C9E97_RS15525;Name=C9E97_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15525;old_locus_tag=C9E97_15870
NZ_PYKA01000109.1	Protein Homology	CDS	124899	125087	.	-	0	ID=cds-WP_001537749.1;Parent=gene-C9E97_RS15525;Dbxref=GenBank:WP_001537749.1;Name=WP_001537749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=C9E97_RS15525;product=YdiH family protein;protein_id=WP_001537749.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	125186	125596	.	-	.	ID=gene-C9E97_RS15530;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=C9E97_RS15530;old_locus_tag=C9E97_15875
NZ_PYKA01000109.1	Protein Homology	CDS	125186	125596	.	-	0	ID=cds-WP_000637930.1;Parent=gene-C9E97_RS15530;Dbxref=GenBank:WP_000637930.1;Name=WP_000637930.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460331.1;locus_tag=C9E97_RS15530;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637930.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	125593	128649	.	-	.	ID=gene-C9E97_RS15535;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=C9E97_RS15535;old_locus_tag=C9E97_15880
NZ_PYKA01000109.1	Protein Homology	CDS	125593	128649	.	-	0	ID=cds-WP_000612923.1;Parent=gene-C9E97_RS15535;Dbxref=GenBank:WP_000612923.1;Name=WP_000612923.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460330.1;locus_tag=C9E97_RS15535;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_000612923.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	128914	130032	.	+	.	ID=gene-C9E97_RS15540;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=C9E97_RS15540;old_locus_tag=C9E97_15885
NZ_PYKA01000109.1	Protein Homology	CDS	128914	130032	.	+	0	ID=cds-WP_000248615.1;Parent=gene-C9E97_RS15540;Dbxref=GenBank:WP_000248615.1;Name=WP_000248615.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460329.1;locus_tag=C9E97_RS15540;product=AI-2E family transporter YdiK;protein_id=WP_000248615.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	130215	130322	.	+	.	ID=gene-C9E97_RS15545;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=C9E97_RS15545;old_locus_tag=C9E97_15890
NZ_PYKA01000109.1	cmsearch	antisense_RNA	130215	130322	.	+	.	ID=rna-C9E97_RS15545;Parent=gene-C9E97_RS15545;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS15545;product=antisense sRNA RprA
NZ_PYKA01000109.1	cmsearch	exon	130215	130322	.	+	.	ID=exon-C9E97_RS15545-1;Parent=rna-C9E97_RS15545;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS15545;product=antisense sRNA RprA
NZ_PYKA01000109.1	RefSeq	gene	130490	130849	.	+	.	ID=gene-C9E97_RS15550;Name=C9E97_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15550;old_locus_tag=C9E97_15895
NZ_PYKA01000109.1	Protein Homology	CDS	130490	130849	.	+	0	ID=cds-WP_023237082.1;Parent=gene-C9E97_RS15550;Dbxref=GenBank:WP_023237082.1;Name=WP_023237082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460328.1;locus_tag=C9E97_RS15550;product=YdiL family protein;protein_id=WP_023237082.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	130990	132201	.	+	.	ID=gene-C9E97_RS15555;Name=C9E97_RS15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15555;old_locus_tag=C9E97_15900
NZ_PYKA01000109.1	Protein Homology	CDS	130990	132201	.	+	0	ID=cds-WP_135369766.1;Parent=gene-C9E97_RS15555;Dbxref=GenBank:WP_135369766.1;Name=WP_135369766.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460327.1;locus_tag=C9E97_RS15555;product=MFS transporter;protein_id=WP_135369766.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	132714	133949	.	+	.	ID=gene-C9E97_RS15565;Name=C9E97_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15565;old_locus_tag=C9E97_15905
NZ_PYKA01000109.1	Protein Homology	CDS	132714	133949	.	+	0	ID=cds-WP_000081211.1;Parent=gene-C9E97_RS15565;Dbxref=GenBank:WP_000081211.1;Name=WP_000081211.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460326.1;locus_tag=C9E97_RS15565;product=MFS transporter;protein_id=WP_000081211.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	134016	134882	.	+	.	ID=gene-C9E97_RS15570;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=C9E97_RS15570;old_locus_tag=C9E97_15910
NZ_PYKA01000109.1	Protein Homology	CDS	134016	134882	.	+	0	ID=cds-WP_000383488.1;Parent=gene-C9E97_RS15570;Dbxref=GenBank:WP_000383488.1;Name=WP_000383488.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460325.1;locus_tag=C9E97_RS15570;product=quinate/shikimate dehydrogenase;protein_id=WP_000383488.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	134927	135685	.	+	.	ID=gene-C9E97_RS15575;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=C9E97_RS15575;old_locus_tag=C9E97_15915
NZ_PYKA01000109.1	Protein Homology	CDS	134927	135685	.	+	0	ID=cds-WP_000860221.1;Parent=gene-C9E97_RS15575;Dbxref=GenBank:WP_000860221.1;Name=WP_000860221.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460324.1;locus_tag=C9E97_RS15575;product=type I 3-dehydroquinate dehydratase;protein_id=WP_000860221.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	135839	137434	.	+	.	ID=gene-C9E97_RS15580;Name=C9E97_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15580;old_locus_tag=C9E97_15920
NZ_PYKA01000109.1	Protein Homology	CDS	135839	137434	.	+	0	ID=cds-WP_000700599.1;Parent=gene-C9E97_RS15580;Dbxref=GenBank:WP_000700599.1;Name=WP_000700599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=C9E97_RS15580;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_000700599.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	137448	138599	.	+	.	ID=gene-C9E97_RS15585;Name=C9E97_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15585;old_locus_tag=C9E97_15925
NZ_PYKA01000109.1	Protein Homology	CDS	137448	138599	.	+	0	ID=cds-WP_000347819.1;Parent=gene-C9E97_RS15585;Dbxref=GenBank:WP_000347819.1;Name=WP_000347819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460322.1;locus_tag=C9E97_RS15585;product=acyl-CoA dehydrogenase;protein_id=WP_000347819.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	138675	139565	.	-	.	ID=gene-C9E97_RS15590;Name=C9E97_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15590;old_locus_tag=C9E97_15930
NZ_PYKA01000109.1	Protein Homology	CDS	138675	139565	.	-	0	ID=cds-WP_000284832.1;Parent=gene-C9E97_RS15590;Dbxref=GenBank:WP_000284832.1;Name=WP_000284832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460321.1;locus_tag=C9E97_RS15590;product=AraC family transcriptional regulator;protein_id=WP_000284832.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	140028	140792	.	+	.	ID=gene-C9E97_RS15595;Name=C9E97_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15595;old_locus_tag=C9E97_15935
NZ_PYKA01000109.1	Protein Homology	CDS	140028	140792	.	+	0	ID=cds-WP_135369767.1;Parent=gene-C9E97_RS15595;Dbxref=GenBank:WP_135369767.1;Name=WP_135369767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460320.1;locus_tag=C9E97_RS15595;product=electron transfer flavoprotein;protein_id=WP_135369767.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	140814	141749	.	+	.	ID=gene-C9E97_RS15600;Name=C9E97_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15600;old_locus_tag=C9E97_15940
NZ_PYKA01000109.1	Protein Homology	CDS	140814	141749	.	+	0	ID=cds-WP_001015883.1;Parent=gene-C9E97_RS15600;Dbxref=GenBank:WP_001015883.1;Name=WP_001015883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460319.1;locus_tag=C9E97_RS15600;product=electron transfer flavoprotein subunit alpha;protein_id=WP_001015883.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	141806	143092	.	+	.	ID=gene-C9E97_RS15605;Name=C9E97_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15605;old_locus_tag=C9E97_15945
NZ_PYKA01000109.1	Protein Homology	CDS	141806	143092	.	+	0	ID=cds-WP_001278565.1;Parent=gene-C9E97_RS15605;Dbxref=GenBank:WP_001278565.1;Name=WP_001278565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460318.1;locus_tag=C9E97_RS15605;product=FAD-dependent oxidoreductase;protein_id=WP_001278565.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	143089	143382	.	+	.	ID=gene-C9E97_RS15610;Name=C9E97_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15610;old_locus_tag=C9E97_15950
NZ_PYKA01000109.1	Protein Homology	CDS	143089	143382	.	+	0	ID=cds-WP_000093359.1;Parent=gene-C9E97_RS15610;Dbxref=GenBank:WP_000093359.1;Name=WP_000093359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460317.1;locus_tag=C9E97_RS15610;product=ferredoxin family protein;protein_id=WP_000093359.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	143620	145260	.	+	.	ID=gene-C9E97_RS15615;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=C9E97_RS15615;old_locus_tag=C9E97_15955
NZ_PYKA01000109.1	Protein Homology	CDS	143620	145260	.	+	0	ID=cds-WP_135369768.1;Parent=gene-C9E97_RS15615;Dbxref=GenBank:WP_135369768.1;Name=WP_135369768.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460316.1;locus_tag=C9E97_RS15615;product=medium-chain fatty-acid--CoA ligase;protein_id=WP_135369768.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	145302	147680	.	-	.	ID=gene-C9E97_RS15620;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=C9E97_RS15620;old_locus_tag=C9E97_15960
NZ_PYKA01000109.1	Protein Homology	CDS	145302	147680	.	-	0	ID=cds-WP_000069340.1;Parent=gene-C9E97_RS15620;Dbxref=GenBank:WP_000069340.1;Name=WP_000069340.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460315.1;locus_tag=C9E97_RS15620;product=phosphoenolpyruvate synthase;protein_id=WP_000069340.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	148017	148850	.	+	.	ID=gene-C9E97_RS15625;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=C9E97_RS15625;old_locus_tag=C9E97_15965
NZ_PYKA01000109.1	Protein Homology	CDS	148017	148850	.	+	0	ID=cds-WP_000370992.1;Parent=gene-C9E97_RS15625;Dbxref=GenBank:WP_000370992.1;Name=WP_000370992.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460314.1;locus_tag=C9E97_RS15625;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_000370992.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	149006	150052	.	+	.	ID=gene-C9E97_RS15630;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=C9E97_RS15630;old_locus_tag=C9E97_15970
NZ_PYKA01000109.1	Protein Homology	CDS	149006	150052	.	+	0	ID=cds-WP_001082196.1;Parent=gene-C9E97_RS15630;Dbxref=GenBank:WP_001082196.1;Name=WP_001082196.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460313.1;locus_tag=C9E97_RS15630;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_001082196.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	150209	150400	.	+	.	ID=gene-C9E97_RS15635;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=C9E97_RS15635;old_locus_tag=C9E97_15975
NZ_PYKA01000109.1	Protein Homology	CDS	150209	150400	.	+	0	ID=cds-WP_000089115.1;Parent=gene-C9E97_RS15635;Dbxref=GenBank:WP_000089115.1;Name=WP_000089115.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460312.1;locus_tag=C9E97_RS15635;product=hemin uptake protein HemP;protein_id=WP_000089115.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	150435	151877	.	-	.	ID=gene-C9E97_RS15640;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=C9E97_RS15640;old_locus_tag=C9E97_15980
NZ_PYKA01000109.1	Protein Homology	CDS	150435	151877	.	-	0	ID=cds-WP_135369769.1;Parent=gene-C9E97_RS15640;Dbxref=GenBank:WP_135369769.1;Name=WP_135369769.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460311.1;locus_tag=C9E97_RS15640;product=protein adenylyltransferase SelO;protein_id=WP_135369769.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	151939	152649	.	-	.	ID=gene-C9E97_RS15645;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=C9E97_RS15645;old_locus_tag=C9E97_15985
NZ_PYKA01000109.1	Protein Homology	CDS	151939	152649	.	-	0	ID=cds-WP_048485288.1;Parent=gene-C9E97_RS15645;Dbxref=GenBank:WP_048485288.1;Name=WP_048485288.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460310.1;locus_tag=C9E97_RS15645;product=anti-FlhDC factor YdiV;protein_id=WP_048485288.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	152963	153427	.	-	.	ID=gene-C9E97_RS15650;Name=C9E97_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15650;old_locus_tag=C9E97_15990
NZ_PYKA01000109.1	Protein Homology	CDS	152963	153427	.	-	0	ID=cds-WP_001213258.1;Parent=gene-C9E97_RS15650;Dbxref=GenBank:WP_001213258.1;Name=WP_001213258.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460309.1;locus_tag=C9E97_RS15650;product=C40 family peptidase;protein_id=WP_001213258.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	153504	154253	.	-	.	ID=gene-C9E97_RS15655;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=C9E97_RS15655;old_locus_tag=C9E97_15995
NZ_PYKA01000109.1	Protein Homology	CDS	153504	154253	.	-	0	ID=cds-WP_000080607.1;Parent=gene-C9E97_RS15655;Dbxref=GenBank:WP_000080607.1;Name=WP_000080607.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460308.1;locus_tag=C9E97_RS15655;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_000080607.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	154253	154804	.	-	.	ID=gene-C9E97_RS15660;Name=C9E97_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15660;old_locus_tag=C9E97_16000
NZ_PYKA01000109.1	Protein Homology	CDS	154253	154804	.	-	0	ID=cds-WP_094889204.1;Parent=gene-C9E97_RS15660;Dbxref=GenBank:WP_094889204.1;Name=WP_094889204.1;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460307.1;locus_tag=C9E97_RS15660;product=glutathione peroxidase;protein_id=WP_094889204.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	154896	155876	.	-	.	ID=gene-C9E97_RS15665;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=C9E97_RS15665;old_locus_tag=C9E97_16005
NZ_PYKA01000109.1	Protein Homology	CDS	154896	155876	.	-	0	ID=cds-WP_000954982.1;Parent=gene-C9E97_RS15665;Dbxref=GenBank:WP_000954982.1;Name=WP_000954982.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460306.1;locus_tag=C9E97_RS15665;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_000954982.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	156079	156378	.	-	.	ID=gene-C9E97_RS15670;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=C9E97_RS15670;old_locus_tag=C9E97_16010
NZ_PYKA01000109.1	Protein Homology	CDS	156079	156378	.	-	0	ID=cds-WP_001229266.1;Parent=gene-C9E97_RS15670;Dbxref=GenBank:WP_001229266.1;Name=WP_001229266.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=C9E97_RS15670;product=integration host factor subunit alpha;protein_id=WP_001229266.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	156383	158770	.	-	.	ID=gene-C9E97_RS15675;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=C9E97_RS15675;old_locus_tag=C9E97_16015
NZ_PYKA01000109.1	Protein Homology	CDS	156383	158770	.	-	0	ID=cds-WP_000672402.1;Parent=gene-C9E97_RS15675;Dbxref=GenBank:WP_000672402.1;Name=WP_000672402.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=C9E97_RS15675;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_000672402.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	158786	159769	.	-	.	ID=gene-C9E97_RS15680;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=C9E97_RS15680;old_locus_tag=C9E97_16020
NZ_PYKA01000109.1	Protein Homology	CDS	158786	159769	.	-	0	ID=cds-WP_000018570.1;Parent=gene-C9E97_RS15680;Dbxref=GenBank:WP_000018570.1;Name=WP_000018570.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=C9E97_RS15680;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_000018570.1;transl_table=11
NZ_PYKA01000109.1	cmsearch	sequence_feature	159832	159955	.	-	.	ID=id-NZ_PYKA01000109.1:159832..159955;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PYKA01000109.1	RefSeq	gene	159906	159950	.	-	.	ID=gene-C9E97_RS15685;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=C9E97_RS15685;old_locus_tag=C9E97_16025
NZ_PYKA01000109.1	Protein Homology	CDS	159906	159950	.	-	0	ID=cds-WP_001386830.1;Parent=gene-C9E97_RS15685;Dbxref=GenBank:WP_001386830.1;Name=WP_001386830.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=C9E97_RS15685;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	160071	160427	.	-	.	ID=gene-C9E97_RS15690;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=C9E97_RS15690;old_locus_tag=C9E97_16030
NZ_PYKA01000109.1	Protein Homology	CDS	160071	160427	.	-	0	ID=cds-WP_000124850.1;Parent=gene-C9E97_RS15690;Dbxref=GenBank:WP_000124850.1;Name=WP_000124850.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=C9E97_RS15690;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	160478	160675	.	-	.	ID=gene-C9E97_RS15695;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=C9E97_RS15695;old_locus_tag=C9E97_16035
NZ_PYKA01000109.1	Protein Homology	CDS	160478	160675	.	-	0	ID=cds-WP_001124225.1;Parent=gene-C9E97_RS15695;Dbxref=GenBank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=C9E97_RS15695;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	160771	161313	.	-	.	ID=gene-C9E97_RS15700;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=C9E97_RS15700;old_locus_tag=C9E97_16040
NZ_PYKA01000109.1	Protein Homology	CDS	160771	161313	.	-	0	ID=cds-WP_001574431.1;Parent=gene-C9E97_RS15700;Dbxref=GenBank:WP_001574431.1;Name=WP_001574431.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=C9E97_RS15700;product=translation initiation factor IF-3;protein_id=WP_001574431.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	161317	163245	.	-	.	ID=gene-C9E97_RS15705;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=C9E97_RS15705;old_locus_tag=C9E97_16045
NZ_PYKA01000109.1	Protein Homology	CDS	161317	163245	.	-	0	ID=cds-WP_001144226.1;Parent=gene-C9E97_RS15705;Dbxref=GenBank:WP_001144226.1;Name=WP_001144226.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=C9E97_RS15705;product=threonine--tRNA ligase;protein_id=WP_001144226.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	164136	165359	.	+	.	ID=gene-C9E97_RS15715;Name=rfc;gbkey=Gene;gene=rfc;gene_biotype=protein_coding;locus_tag=C9E97_RS15715;old_locus_tag=C9E97_16055
NZ_PYKA01000109.1	Protein Homology	CDS	164136	165359	.	+	0	ID=cds-WP_053445631.1;Parent=gene-C9E97_RS15715;Dbxref=GenBank:WP_053445631.1;Name=WP_053445631.1;gbkey=CDS;gene=rfc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460298.1;locus_tag=C9E97_RS15715;product=O-antigen polymerase Rfc;protein_id=WP_053445631.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	pseudogene	165666	165871	.	-	.	ID=gene-C9E97_RS15720;Name=C9E97_RS15720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS15720;old_locus_tag=C9E97_16060;pseudo=true
NZ_PYKA01000109.1	Protein Homology	CDS	165666	165871	.	-	0	ID=cds-C9E97_RS15720;Parent=gene-C9E97_RS15720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447756.1;locus_tag=C9E97_RS15720;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	166044	166898	.	-	.	ID=gene-C9E97_RS15725;Name=C9E97_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15725;old_locus_tag=C9E97_16065
NZ_PYKA01000109.1	Protein Homology	CDS	166044	166898	.	-	0	ID=cds-WP_001044093.1;Parent=gene-C9E97_RS15725;Dbxref=GenBank:WP_001044093.1;Name=WP_001044093.1;Ontology_term=GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=C9E97_RS15725;product=DNA/RNA non-specific endonuclease;protein_id=WP_001044093.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	166895	167209	.	-	.	ID=gene-C9E97_RS15730;Name=C9E97_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15730;old_locus_tag=C9E97_16070
NZ_PYKA01000109.1	Protein Homology	CDS	166895	167209	.	-	0	ID=cds-WP_000916613.1;Parent=gene-C9E97_RS15730;Dbxref=GenBank:WP_000916613.1;Name=WP_000916613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460295.1;locus_tag=C9E97_RS15730;product=hypothetical protein;protein_id=WP_000916613.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	167352	168311	.	+	.	ID=gene-C9E97_RS15735;Name=C9E97_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15735;old_locus_tag=C9E97_16075
NZ_PYKA01000109.1	Protein Homology	CDS	167352	168311	.	+	0	ID=cds-WP_001046434.1;Parent=gene-C9E97_RS15735;Dbxref=GenBank:WP_001046434.1;Name=WP_001046434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460294.1;locus_tag=C9E97_RS15735;product=lipid A deacylase LpxR family protein;protein_id=WP_001046434.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	168360	169118	.	-	.	ID=gene-C9E97_RS15740;Name=C9E97_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15740;old_locus_tag=C9E97_16080
NZ_PYKA01000109.1	Protein Homology	CDS	168360	169118	.	-	0	ID=cds-WP_000770981.1;Parent=gene-C9E97_RS15740;Dbxref=GenBank:WP_000770981.1;Name=WP_000770981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460293.1;locus_tag=C9E97_RS15740;product=DUF481 domain-containing protein;protein_id=WP_000770981.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	169407	170339	.	+	.	ID=gene-C9E97_RS15745;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=C9E97_RS15745;old_locus_tag=C9E97_16085
NZ_PYKA01000109.1	Protein Homology	CDS	169407	170339	.	+	0	ID=cds-WP_000251707.1;Parent=gene-C9E97_RS15745;Dbxref=GenBank:WP_000251707.1;Name=WP_000251707.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460292.1;locus_tag=C9E97_RS15745;product=6-phosphofructokinase II;protein_id=WP_000251707.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	170436	170726	.	+	.	ID=gene-C9E97_RS15750;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=C9E97_RS15750;old_locus_tag=C9E97_16090
NZ_PYKA01000109.1	Protein Homology	CDS	170436	170726	.	+	0	ID=cds-WP_000146133.1;Parent=gene-C9E97_RS15750;Dbxref=GenBank:WP_000146133.1;Name=WP_000146133.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460291.1;locus_tag=C9E97_RS15750;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000146133.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	170833	171693	.	+	.	ID=gene-C9E97_RS15755;Name=C9E97_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15755;old_locus_tag=C9E97_16095
NZ_PYKA01000109.1	Protein Homology	CDS	170833	171693	.	+	0	ID=cds-WP_000267686.1;Parent=gene-C9E97_RS15755;Dbxref=GenBank:WP_000267686.1;Name=WP_000267686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460290.1;locus_tag=C9E97_RS15755;product=fructosamine kinase family protein;protein_id=WP_000267686.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	171736	172272	.	-	.	ID=gene-C9E97_RS15760;Name=C9E97_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15760;old_locus_tag=C9E97_16100
NZ_PYKA01000109.1	Protein Homology	CDS	171736	172272	.	-	0	ID=cds-WP_000222158.1;Parent=gene-C9E97_RS15760;Dbxref=GenBank:WP_000222158.1;Name=WP_000222158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460289.1;locus_tag=C9E97_RS15760;product=YniB family protein;protein_id=WP_000222158.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	172421	173089	.	+	.	ID=gene-C9E97_RS15765;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=C9E97_RS15765;old_locus_tag=C9E97_16105
NZ_PYKA01000109.1	Protein Homology	CDS	172421	173089	.	+	0	ID=cds-WP_000106848.1;Parent=gene-C9E97_RS15765;Dbxref=GenBank:WP_000106848.1;Name=WP_000106848.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460288.1;locus_tag=C9E97_RS15765;product=hexitol phosphatase HxpB;protein_id=WP_000106848.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	173227	173826	.	+	.	ID=gene-C9E97_RS15770;Name=C9E97_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15770;old_locus_tag=C9E97_16110
NZ_PYKA01000109.1	Protein Homology	CDS	173227	173826	.	+	0	ID=cds-WP_000505804.1;Parent=gene-C9E97_RS15770;Dbxref=GenBank:WP_000505804.1;Name=WP_000505804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460287.3;locus_tag=C9E97_RS15770;product=metal-dependent hydrolase;protein_id=WP_000505804.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	173963	175354	.	+	.	ID=gene-C9E97_RS15775;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=C9E97_RS15775;old_locus_tag=C9E97_16115
NZ_PYKA01000109.1	Protein Homology	CDS	173963	175354	.	+	0	ID=cds-WP_001010662.1;Parent=gene-C9E97_RS15775;Dbxref=GenBank:WP_001010662.1;Name=WP_001010662.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=C9E97_RS15775;product=cystine/sulfocysteine:cation symporter;protein_id=WP_001010662.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	175457	175699	.	-	.	ID=gene-C9E97_RS15780;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=C9E97_RS15780;old_locus_tag=C9E97_16120
NZ_PYKA01000109.1	Protein Homology	CDS	175457	175699	.	-	0	ID=cds-WP_000977510.1;Parent=gene-C9E97_RS15780;Dbxref=GenBank:WP_000977510.1;Name=WP_000977510.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460285.1;locus_tag=C9E97_RS15780;product=cell division activator CedA;protein_id=WP_000977510.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	176064	178316	.	+	.	ID=gene-C9E97_RS15785;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=C9E97_RS15785;old_locus_tag=C9E97_16125
NZ_PYKA01000109.1	Protein Homology	CDS	176064	178316	.	+	0	ID=cds-WP_050068362.1;Parent=gene-C9E97_RS15785;Dbxref=GenBank:WP_050068362.1;Name=WP_050068362.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=C9E97_RS15785;product=catalase HPII;protein_id=WP_050068362.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	178360	179118	.	-	.	ID=gene-C9E97_RS15790;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=C9E97_RS15790;old_locus_tag=C9E97_16130
NZ_PYKA01000109.1	Protein Homology	CDS	178360	179118	.	-	0	ID=cds-WP_135369226.1;Parent=gene-C9E97_RS15790;Dbxref=GenBank:WP_135369226.1;Name=WP_135369226.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460283.1;locus_tag=C9E97_RS15790;product=chitin disaccharide deacetylase;protein_id=WP_135369226.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	179131	180486	.	-	.	ID=gene-C9E97_RS15795;Name=C9E97_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15795;old_locus_tag=C9E97_16135
NZ_PYKA01000109.1	Protein Homology	CDS	179131	180486	.	-	0	ID=cds-WP_050068361.1;Parent=gene-C9E97_RS15795;Dbxref=GenBank:WP_050068361.1;Name=WP_050068361.1;Ontology_term=GO:0005975,GO:0008706,GO:0046872;gbkey=CDS;go_function=6-phospho-beta-glucosidase activity|0008706||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460282.1;locus_tag=C9E97_RS15795;product=6-phospho-beta-glucosidase;protein_id=WP_050068361.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	180611	181453	.	-	.	ID=gene-C9E97_RS15800;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=C9E97_RS15800;old_locus_tag=C9E97_16140
NZ_PYKA01000109.1	Protein Homology	CDS	180611	181453	.	-	0	ID=cds-WP_000983393.1;Parent=gene-C9E97_RS15800;Dbxref=GenBank:WP_000983393.1;Name=WP_000983393.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460281.1;locus_tag=C9E97_RS15800;product=transcriptional regulator ChbR;protein_id=WP_000983393.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	181464	181811	.	-	.	ID=gene-C9E97_RS15805;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=C9E97_RS15805;old_locus_tag=C9E97_16145
NZ_PYKA01000109.1	Protein Homology	CDS	181464	181811	.	-	0	ID=cds-WP_000459883.1;Parent=gene-C9E97_RS15805;Dbxref=GenBank:WP_000459883.1;Name=WP_000459883.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460280.1;locus_tag=C9E97_RS15805;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_000459883.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	181862	183220	.	-	.	ID=gene-C9E97_RS15810;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=C9E97_RS15810;old_locus_tag=C9E97_16150
NZ_PYKA01000109.1	Protein Homology	CDS	181862	183220	.	-	0	ID=cds-WP_000073064.1;Parent=gene-C9E97_RS15810;Dbxref=GenBank:WP_000073064.1;Name=WP_000073064.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=C9E97_RS15810;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_000073064.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	183303	183623	.	-	.	ID=gene-C9E97_RS15815;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=C9E97_RS15815;old_locus_tag=C9E97_16155
NZ_PYKA01000109.1	Protein Homology	CDS	183303	183623	.	-	0	ID=cds-WP_000412161.1;Parent=gene-C9E97_RS15815;Dbxref=GenBank:WP_000412161.1;Name=WP_000412161.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460278.1;locus_tag=C9E97_RS15815;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_000412161.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	183924	184265	.	-	.	ID=gene-C9E97_RS15825;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=C9E97_RS15825;old_locus_tag=C9E97_16165
NZ_PYKA01000109.1	Protein Homology	CDS	183924	184265	.	-	0	ID=cds-WP_001039301.1;Parent=gene-C9E97_RS15825;Dbxref=GenBank:WP_001039301.1;Name=WP_001039301.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460277.1;locus_tag=C9E97_RS15825;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_001039301.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	184484	185311	.	+	.	ID=gene-C9E97_RS15830;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=C9E97_RS15830;old_locus_tag=C9E97_16170
NZ_PYKA01000109.1	Protein Homology	CDS	184484	185311	.	+	0	ID=cds-WP_000174981.1;Parent=gene-C9E97_RS15830;Dbxref=GenBank:WP_000174981.1;Name=WP_000174981.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460276.1;locus_tag=C9E97_RS15830;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_000174981.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	185432	186313	.	+	.	ID=gene-C9E97_RS15835;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=C9E97_RS15835;old_locus_tag=C9E97_16175
NZ_PYKA01000109.1	Protein Homology	CDS	185432	186313	.	+	0	ID=cds-WP_001518228.1;Parent=gene-C9E97_RS15835;Dbxref=GenBank:WP_001518228.1;Name=WP_001518228.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233065.1;locus_tag=C9E97_RS15835;product=excinuclease Cho;protein_id=WP_001518228.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	186388	186873	.	-	.	ID=gene-C9E97_RS15840;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=C9E97_RS15840;old_locus_tag=C9E97_16180
NZ_PYKA01000109.1	Protein Homology	CDS	186388	186873	.	-	0	ID=cds-WP_001229001.1;Parent=gene-C9E97_RS15840;Dbxref=GenBank:WP_001229001.1;Name=WP_001229001.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460274.1;locus_tag=C9E97_RS15840;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_001229001.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	187209	188177	.	-	.	ID=gene-C9E97_RS15845;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=C9E97_RS15845;old_locus_tag=C9E97_16190
NZ_PYKA01000109.1	Protein Homology	CDS	187209	188177	.	-	0	ID=cds-WP_050068360.1;Parent=gene-C9E97_RS15845;Dbxref=GenBank:WP_050068360.1;Name=WP_050068360.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460273.1;locus_tag=C9E97_RS15845;product=succinylglutamate desuccinylase;protein_id=WP_050068360.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	188170	189513	.	-	.	ID=gene-C9E97_RS15850;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=C9E97_RS15850;old_locus_tag=C9E97_16195
NZ_PYKA01000109.1	Protein Homology	CDS	188170	189513	.	-	0	ID=cds-WP_050068359.1;Parent=gene-C9E97_RS15850;Dbxref=GenBank:WP_050068359.1;Name=WP_050068359.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460272.1;locus_tag=C9E97_RS15850;product=N-succinylarginine dihydrolase;protein_id=WP_050068359.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	189510	190988	.	-	.	ID=gene-C9E97_RS15855;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=C9E97_RS15855;old_locus_tag=C9E97_16200
NZ_PYKA01000109.1	Protein Homology	CDS	189510	190988	.	-	0	ID=cds-WP_050068358.1;Parent=gene-C9E97_RS15855;Dbxref=GenBank:WP_050068358.1;Name=WP_050068358.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460271.1;locus_tag=C9E97_RS15855;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_050068358.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	190985	192019	.	-	.	ID=gene-C9E97_RS15860;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=C9E97_RS15860;old_locus_tag=C9E97_16205
NZ_PYKA01000109.1	Protein Homology	CDS	190985	192019	.	-	0	ID=cds-WP_001263889.1;Parent=gene-C9E97_RS15860;Dbxref=GenBank:WP_001263889.1;Name=WP_001263889.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460270.1;locus_tag=C9E97_RS15860;product=arginine N-succinyltransferase;protein_id=WP_001263889.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	192010	193236	.	-	.	ID=gene-C9E97_RS15865;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;locus_tag=C9E97_RS15865;old_locus_tag=C9E97_16210
NZ_PYKA01000109.1	Protein Homology	CDS	192010	193236	.	-	0	ID=cds-WP_023226924.1;Parent=gene-C9E97_RS15865;Dbxref=GenBank:WP_023226924.1;Name=WP_023226924.1;gbkey=CDS;gene=astC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460269.1;locus_tag=C9E97_RS15865;product=succinylornithine/acetylornithine transaminase;protein_id=WP_023226924.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	193682	194488	.	+	.	ID=gene-C9E97_RS15870;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=C9E97_RS15870;old_locus_tag=C9E97_16220
NZ_PYKA01000109.1	Protein Homology	CDS	193682	194488	.	+	0	ID=cds-WP_000673954.1;Parent=gene-C9E97_RS15870;Dbxref=GenBank:WP_000673954.1;Name=WP_000673954.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460268.1;locus_tag=C9E97_RS15870;product=exodeoxyribonuclease III;protein_id=WP_000673954.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	194561	194977	.	+	.	ID=gene-C9E97_RS15875;Name=C9E97_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15875;old_locus_tag=C9E97_16225
NZ_PYKA01000109.1	Protein Homology	CDS	194561	194977	.	+	0	ID=cds-WP_000592135.1;Parent=gene-C9E97_RS15875;Dbxref=GenBank:WP_000592135.1;Name=WP_000592135.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460267.1;locus_tag=C9E97_RS15875;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WP_000592135.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	194937	195212	.	-	.	ID=gene-C9E97_RS15880;Name=C9E97_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15880;old_locus_tag=C9E97_16230
NZ_PYKA01000109.1	Protein Homology	CDS	194937	195212	.	-	0	ID=cds-WP_050068357.1;Parent=gene-C9E97_RS15880;Dbxref=GenBank:WP_050068357.1;Name=WP_050068357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465441.1;locus_tag=C9E97_RS15880;product=YnjH family protein;protein_id=WP_050068357.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	195451	196794	.	+	.	ID=gene-C9E97_RS15885;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=C9E97_RS15885;old_locus_tag=C9E97_16235
NZ_PYKA01000109.1	Protein Homology	CDS	195451	196794	.	+	0	ID=cds-WP_000372865.1;Parent=gene-C9E97_RS15885;Dbxref=GenBank:WP_000372865.1;Name=WP_000372865.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460265.1;locus_tag=C9E97_RS15885;product=NADP-specific glutamate dehydrogenase;protein_id=WP_000372865.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	196824	198773	.	-	.	ID=gene-C9E97_RS15890;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=C9E97_RS15890;old_locus_tag=C9E97_16240
NZ_PYKA01000109.1	Protein Homology	CDS	196824	198773	.	-	0	ID=cds-WP_001235863.1;Parent=gene-C9E97_RS15890;Dbxref=GenBank:WP_001235863.1;Name=WP_001235863.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460264.1;locus_tag=C9E97_RS15890;product=DNA topoisomerase III;protein_id=WP_001235863.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	198778	199821	.	-	.	ID=gene-C9E97_RS15895;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=C9E97_RS15895;old_locus_tag=C9E97_16245
NZ_PYKA01000109.1	Protein Homology	CDS	198778	199821	.	-	0	ID=cds-WP_001294900.1;Parent=gene-C9E97_RS15895;Dbxref=GenBank:WP_001294900.1;Name=WP_001294900.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460263.1;locus_tag=C9E97_RS15895;product=selenide%2C water dikinase SelD;protein_id=WP_001294900.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	199939	200490	.	-	.	ID=gene-C9E97_RS15900;Name=C9E97_RS15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15900;old_locus_tag=C9E97_16250
NZ_PYKA01000109.1	Protein Homology	CDS	199939	200490	.	-	0	ID=cds-WP_000339313.1;Parent=gene-C9E97_RS15900;Dbxref=GenBank:WP_000339313.1;Name=WP_000339313.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460262.1;locus_tag=C9E97_RS15900;product=NAD(P)H nitroreductase;protein_id=WP_000339313.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	200664	202520	.	+	.	ID=gene-C9E97_RS15905;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=C9E97_RS15905;old_locus_tag=C9E97_16255
NZ_PYKA01000109.1	Protein Homology	CDS	200664	202520	.	+	0	ID=cds-WP_050068356.1;Parent=gene-C9E97_RS15905;Dbxref=GenBank:WP_050068356.1;Name=WP_050068356.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460261.1;locus_tag=C9E97_RS15905;product=signal peptide peptidase SppA;protein_id=WP_050068356.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	202616	203632	.	+	.	ID=gene-C9E97_RS15910;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=C9E97_RS15910;old_locus_tag=C9E97_16260
NZ_PYKA01000109.1	Protein Homology	CDS	202616	203632	.	+	0	ID=cds-WP_001170136.1;Parent=gene-C9E97_RS15910;Dbxref=GenBank:WP_001170136.1;Name=WP_001170136.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460260.1;locus_tag=C9E97_RS15910;product=asparaginase;protein_id=WP_001170136.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	203659	204315	.	+	.	ID=gene-C9E97_RS15915;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=C9E97_RS15915;old_locus_tag=C9E97_16265
NZ_PYKA01000109.1	Protein Homology	CDS	203659	204315	.	+	0	ID=cds-WP_000184707.1;Parent=gene-C9E97_RS15915;Dbxref=GenBank:WP_000184707.1;Name=WP_000184707.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460259.1;locus_tag=C9E97_RS15915;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_000184707.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	204418	205776	.	-	.	ID=gene-C9E97_RS15920;Name=C9E97_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15920;old_locus_tag=C9E97_16270
NZ_PYKA01000109.1	Protein Homology	CDS	204418	205776	.	-	0	ID=cds-WP_057935504.1;Parent=gene-C9E97_RS15920;Dbxref=GenBank:WP_057935504.1;Name=WP_057935504.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000389924.1;locus_tag=C9E97_RS15920;product=MFS transporter;protein_id=WP_057935504.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	205912	206670	.	-	.	ID=gene-C9E97_RS15925;Name=C9E97_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15925;old_locus_tag=C9E97_16275
NZ_PYKA01000109.1	Protein Homology	CDS	205912	206670	.	-	0	ID=cds-WP_079902888.1;Parent=gene-C9E97_RS15925;Dbxref=GenBank:WP_079902888.1;Name=WP_079902888.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226392.1;locus_tag=C9E97_RS15925;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_079902888.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	206800	207783	.	-	.	ID=gene-C9E97_RS15930;Name=ydjG;gbkey=Gene;gene=ydjG;gene_biotype=protein_coding;locus_tag=C9E97_RS15930;old_locus_tag=C9E97_16280
NZ_PYKA01000109.1	Protein Homology	CDS	206800	207783	.	-	0	ID=cds-WP_000782142.1;Parent=gene-C9E97_RS15930;Dbxref=GenBank:WP_000782142.1;Name=WP_000782142.1;Ontology_term=GO:0019170;gbkey=CDS;gene=ydjG;go_function=methylglyoxal reductase (NADH) activity|0019170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000782140.1;locus_tag=C9E97_RS15930;product=NADH-dependent methylglyoxal reductase;protein_id=WP_000782142.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	207793	208740	.	-	.	ID=gene-C9E97_RS15935;Name=C9E97_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15935;old_locus_tag=C9E97_16285
NZ_PYKA01000109.1	Protein Homology	CDS	207793	208740	.	-	0	ID=cds-WP_000343332.1;Parent=gene-C9E97_RS15935;Dbxref=GenBank:WP_000343332.1;Name=WP_000343332.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416286.4;locus_tag=C9E97_RS15935;product=sugar kinase;protein_id=WP_000343332.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	208745	209581	.	-	.	ID=gene-C9E97_RS15940;Name=C9E97_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15940;old_locus_tag=C9E97_16290
NZ_PYKA01000109.1	Protein Homology	CDS	208745	209581	.	-	0	ID=cds-WP_000878867.1;Parent=gene-C9E97_RS15940;Dbxref=GenBank:WP_000878867.1;Name=WP_000878867.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416287.1;locus_tag=C9E97_RS15940;product=ketose-bisphosphate aldolase;protein_id=WP_000878867.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	209603	210646	.	-	.	ID=gene-C9E97_RS15945;Name=C9E97_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15945;old_locus_tag=C9E97_16295
NZ_PYKA01000109.1	Protein Homology	CDS	209603	210646	.	-	0	ID=cds-WP_000798074.1;Parent=gene-C9E97_RS15945;Dbxref=GenBank:WP_000798074.1;Name=WP_000798074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416288.1;locus_tag=C9E97_RS15945;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_000798074.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	210657	212036	.	-	.	ID=gene-C9E97_RS15950;Name=C9E97_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15950;old_locus_tag=C9E97_16300
NZ_PYKA01000109.1	Protein Homology	CDS	210657	212036	.	-	0	ID=cds-WP_057935506.1;Parent=gene-C9E97_RS15950;Dbxref=GenBank:WP_057935506.1;Name=WP_057935506.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=C9E97_RS15950;product=MFS transporter;protein_id=WP_057935506.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	212063	213139	.	-	.	ID=gene-C9E97_RS15955;Name=C9E97_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15955;old_locus_tag=C9E97_16305
NZ_PYKA01000109.1	Protein Homology	CDS	212063	213139	.	-	0	ID=cds-WP_001728100.1;Parent=gene-C9E97_RS15955;Dbxref=GenBank:WP_001728100.1;Name=WP_001728100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310512.1;locus_tag=C9E97_RS15955;product=zinc-binding dehydrogenase;protein_id=WP_001728100.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	pseudogene	213432	213931	.	+	.	ID=gene-C9E97_RS23840;Name=C9E97_RS23840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23840;partial=true;pseudo=true;start_range=.,213432
NZ_PYKA01000109.1	Protein Homology	CDS	213432	213931	.	+	0	ID=cds-C9E97_RS23840;Parent=gene-C9E97_RS23840;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228952.1;locus_tag=C9E97_RS23840;partial=true;product=glycosyl hydrolase family 18 protein;pseudo=true;start_range=.,213432;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	214041	214319	.	-	.	ID=gene-C9E97_RS15960;Name=C9E97_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15960;old_locus_tag=C9E97_16310
NZ_PYKA01000109.1	Protein Homology	CDS	214041	214319	.	-	0	ID=cds-WP_001046864.1;Parent=gene-C9E97_RS15960;Dbxref=GenBank:WP_001046864.1;Name=WP_001046864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460258.1;locus_tag=C9E97_RS15960;product=YeaC family protein;protein_id=WP_001046864.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	214361	214774	.	-	.	ID=gene-C9E97_RS15965;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=C9E97_RS15965;old_locus_tag=C9E97_16315
NZ_PYKA01000109.1	Protein Homology	CDS	214361	214774	.	-	0	ID=cds-WP_001519539.1;Parent=gene-C9E97_RS15965;Dbxref=GenBank:WP_001519539.1;Name=WP_001519539.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=C9E97_RS15965;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_001519539.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	215116	216111	.	+	.	ID=gene-C9E97_RS15970;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=C9E97_RS15970;old_locus_tag=C9E97_16320
NZ_PYKA01000109.1	Protein Homology	CDS	215116	216111	.	+	0	ID=cds-WP_000153505.1;Parent=gene-C9E97_RS15970;Dbxref=GenBank:WP_000153505.1;Name=WP_000153505.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=C9E97_RS15970;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153505.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	216446	217330	.	+	.	ID=gene-C9E97_RS15980;Name=C9E97_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15980;old_locus_tag=C9E97_16330
NZ_PYKA01000109.1	Protein Homology	CDS	216446	217330	.	+	0	ID=cds-WP_000608662.1;Parent=gene-C9E97_RS15980;Dbxref=GenBank:WP_000608662.1;Name=WP_000608662.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=C9E97_RS15980;product=D-hexose-6-phosphate mutarotase;protein_id=WP_000608662.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	217429	218286	.	-	.	ID=gene-C9E97_RS15985;Name=C9E97_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15985;old_locus_tag=C9E97_16335
NZ_PYKA01000109.1	Protein Homology	CDS	217429	218286	.	-	0	ID=cds-WP_000843751.1;Parent=gene-C9E97_RS15985;Dbxref=GenBank:WP_000843751.1;Name=WP_000843751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460254.1;locus_tag=C9E97_RS15985;product=aldo/keto reductase;protein_id=WP_000843751.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	218383	219579	.	-	.	ID=gene-C9E97_RS15990;Name=C9E97_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15990;old_locus_tag=C9E97_16340
NZ_PYKA01000109.1	Protein Homology	CDS	218383	219579	.	-	0	ID=cds-WP_079802047.1;Parent=gene-C9E97_RS15990;Dbxref=GenBank:WP_079802047.1;Name=WP_079802047.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460253.1;locus_tag=C9E97_RS15990;product=anaerobic sulfatase maturase;protein_id=WP_079802047.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	219869	220615	.	-	.	ID=gene-C9E97_RS15995;Name=C9E97_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS15995;old_locus_tag=C9E97_16345
NZ_PYKA01000109.1	Protein Homology	CDS	219869	220615	.	-	0	ID=cds-WP_000163762.1;Parent=gene-C9E97_RS15995;Dbxref=GenBank:WP_000163762.1;Name=WP_000163762.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460252.1;locus_tag=C9E97_RS15995;product=MipA/OmpV family protein;protein_id=WP_000163762.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	221041	222975	.	+	.	ID=gene-C9E97_RS16000;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=C9E97_RS16000;old_locus_tag=C9E97_16350
NZ_PYKA01000109.1	Protein Homology	CDS	221041	222975	.	+	0	ID=cds-WP_001518010.1;Parent=gene-C9E97_RS16000;Dbxref=GenBank:WP_001518010.1;Name=WP_001518010.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=C9E97_RS16000;product=protein kinase YeaG;protein_id=WP_001518010.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	223098	224384	.	+	.	ID=gene-C9E97_RS16005;Name=C9E97_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16005;old_locus_tag=C9E97_16355
NZ_PYKA01000109.1	Protein Homology	CDS	223098	224384	.	+	0	ID=cds-WP_023244288.1;Parent=gene-C9E97_RS16005;Dbxref=GenBank:WP_023244288.1;Name=WP_023244288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460250.1;locus_tag=C9E97_RS16005;product=YeaH/YhbH family protein;protein_id=WP_023244288.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	224537	224797	.	-	.	ID=gene-C9E97_RS16010;Name=C9E97_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16010;old_locus_tag=C9E97_16360
NZ_PYKA01000109.1	GeneMarkS-2+	CDS	224537	224797	.	-	0	ID=cds-WP_146713048.1;Parent=gene-C9E97_RS16010;Dbxref=GenBank:WP_146713048.1;Name=WP_146713048.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E97_RS16010;product=hypothetical protein;protein_id=WP_146713048.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	225054	226547	.	+	.	ID=gene-C9E97_RS16015;Name=dgcJ;gbkey=Gene;gene=dgcJ;gene_biotype=protein_coding;locus_tag=C9E97_RS16015;old_locus_tag=C9E97_16365
NZ_PYKA01000109.1	Protein Homology	CDS	225054	226547	.	+	0	ID=cds-WP_001048658.1;Parent=gene-C9E97_RS16015;Dbxref=GenBank:WP_001048658.1;Name=WP_001048658.1;Ontology_term=GO:0043709,GO:1902201,GO:0052621;gbkey=CDS;gene=dgcJ;go_function=diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA,negative regulation of bacterial-type flagellum-dependent cell motility|1902201||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460249.1;locus_tag=C9E97_RS16015;product=diguanylate cyclase DgcJ;protein_id=WP_001048658.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	226597	227115	.	+	.	ID=gene-C9E97_RS16020;Name=C9E97_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16020;old_locus_tag=C9E97_16370
NZ_PYKA01000109.1	Protein Homology	CDS	226597	227115	.	+	0	ID=cds-WP_010989016.1;Parent=gene-C9E97_RS16020;Dbxref=GenBank:WP_010989016.1;Name=WP_010989016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460248.1;locus_tag=C9E97_RS16020;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_010989016.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	227260	227367	.	-	.	ID=gene-C9E97_RS16025;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=C9E97_RS16025;old_locus_tag=C9E97_16380
NZ_PYKA01000109.1	Protein Homology	CDS	227260	227367	.	-	0	ID=cds-WP_000272239.1;Parent=gene-C9E97_RS16025;Dbxref=GenBank:WP_000272239.1;Name=WP_000272239.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460247.1;locus_tag=C9E97_RS16025;product=small membrane protein YoaI;protein_id=WP_000272239.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	227573	228019	.	+	.	ID=gene-C9E97_RS16030;Name=C9E97_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16030;old_locus_tag=C9E97_16385
NZ_PYKA01000109.1	Protein Homology	CDS	227573	228019	.	+	0	ID=cds-WP_000460698.1;Parent=gene-C9E97_RS16030;Dbxref=GenBank:WP_000460698.1;Name=WP_000460698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460246.2;locus_tag=C9E97_RS16030;product=DUF441 domain-containing protein;protein_id=WP_000460698.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	227999	228793	.	-	.	ID=gene-C9E97_RS16035;Name=C9E97_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16035;old_locus_tag=C9E97_16390
NZ_PYKA01000109.1	Protein Homology	CDS	227999	228793	.	-	0	ID=cds-WP_000579793.1;Parent=gene-C9E97_RS16035;Dbxref=GenBank:WP_000579793.1;Name=WP_000579793.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460245.1;locus_tag=C9E97_RS16035;product=AraC family transcriptional regulator;protein_id=WP_000579793.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	228894	230078	.	+	.	ID=gene-C9E97_RS16040;Name=C9E97_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16040;old_locus_tag=C9E97_16395
NZ_PYKA01000109.1	Protein Homology	CDS	228894	230078	.	+	0	ID=cds-WP_000205341.1;Parent=gene-C9E97_RS16040;Dbxref=GenBank:WP_000205341.1;Name=WP_000205341.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460244.1;locus_tag=C9E97_RS16040;product=CynX/NimT family MFS transporter;protein_id=WP_000205341.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	230199	230546	.	+	.	ID=gene-C9E97_RS16045;Name=C9E97_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16045;old_locus_tag=C9E97_16400
NZ_PYKA01000109.1	Protein Homology	CDS	230199	230546	.	+	0	ID=cds-WP_001222532.1;Parent=gene-C9E97_RS16045;Dbxref=GenBank:WP_001222532.1;Name=WP_001222532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460243.1;locus_tag=C9E97_RS16045;product=DUF488 domain-containing protein;protein_id=WP_001222532.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	230532	230843	.	-	.	ID=gene-C9E97_RS16050;Name=C9E97_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16050;old_locus_tag=C9E97_16405
NZ_PYKA01000109.1	Protein Homology	CDS	230532	230843	.	-	0	ID=cds-WP_000487126.1;Parent=gene-C9E97_RS16050;Dbxref=GenBank:WP_000487126.1;Name=WP_000487126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460242.1;locus_tag=C9E97_RS16050;product=hypothetical protein;protein_id=WP_000487126.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	230912	231163	.	-	.	ID=gene-C9E97_RS16055;Name=C9E97_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16055;old_locus_tag=C9E97_16410
NZ_PYKA01000109.1	Protein Homology	CDS	230912	231163	.	-	0	ID=cds-WP_000673492.1;Parent=gene-C9E97_RS16055;Dbxref=GenBank:WP_000673492.1;Name=WP_000673492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460241.1;locus_tag=C9E97_RS16055;product=putative hemolysin;protein_id=WP_000673492.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	231359	231457	.	+	.	ID=gene-C9E97_RS16060;Name=C9E97_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16060;old_locus_tag=C9E97_16415
NZ_PYKA01000109.1	Protein Homology	CDS	231359	231457	.	+	0	ID=cds-WP_001589065.1;Parent=gene-C9E97_RS16060;Dbxref=GenBank:WP_001589065.1;Name=WP_001589065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=C9E97_RS16060;product=YoaK family small membrane protein;protein_id=WP_001589065.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	231596	231844	.	-	.	ID=gene-C9E97_RS16065;Name=C9E97_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16065;old_locus_tag=C9E97_16420
NZ_PYKA01000109.1	Protein Homology	CDS	231596	231844	.	-	0	ID=cds-WP_000512149.1;Parent=gene-C9E97_RS16065;Dbxref=GenBank:WP_000512149.1;Name=WP_000512149.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460240.1;locus_tag=C9E97_RS16065;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000512149.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	232158	232799	.	-	.	ID=gene-C9E97_RS16075;Name=C9E97_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16075;old_locus_tag=C9E97_16430
NZ_PYKA01000109.1	Protein Homology	CDS	232158	232799	.	-	0	ID=cds-WP_001576139.1;Parent=gene-C9E97_RS16075;Dbxref=GenBank:WP_001576139.1;Name=WP_001576139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460239.1;locus_tag=C9E97_RS16075;product=hypothetical protein;protein_id=WP_001576139.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	233029	233211	.	-	.	ID=gene-C9E97_RS16080;Name=C9E97_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16080;old_locus_tag=C9E97_16435
NZ_PYKA01000109.1	Protein Homology	CDS	233029	233211	.	-	0	ID=cds-WP_000513733.1;Parent=gene-C9E97_RS16080;Dbxref=GenBank:WP_000513733.1;Name=WP_000513733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460238.1;locus_tag=C9E97_RS16080;product=DUF1869 domain-containing protein;protein_id=WP_000513733.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	233214	233576	.	-	.	ID=gene-C9E97_RS16085;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=C9E97_RS16085;old_locus_tag=C9E97_16440
NZ_PYKA01000109.1	Protein Homology	CDS	233214	233576	.	-	0	ID=cds-WP_001248993.1;Parent=gene-C9E97_RS16085;Dbxref=GenBank:WP_001248993.1;Name=WP_001248993.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460237.1;locus_tag=C9E97_RS16085;product=DUF1971 domain-containing protein YeaR;protein_id=WP_001248993.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	233749	234387	.	-	.	ID=gene-C9E97_RS16090;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=C9E97_RS16090;old_locus_tag=C9E97_16450
NZ_PYKA01000109.1	Protein Homology	CDS	233749	234387	.	-	0	ID=cds-WP_000457190.1;Parent=gene-C9E97_RS16090;Dbxref=GenBank:WP_000457190.1;Name=WP_000457190.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460236.1;locus_tag=C9E97_RS16090;product=leucine efflux protein LeuE;protein_id=WP_000457190.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	234584	235129	.	-	.	ID=gene-C9E97_RS16095;Name=C9E97_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16095;old_locus_tag=C9E97_16455
NZ_PYKA01000109.1	Protein Homology	CDS	234584	235129	.	-	0	ID=cds-WP_023258191.1;Parent=gene-C9E97_RS16095;Dbxref=GenBank:WP_023258191.1;Name=WP_023258191.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460235.1;locus_tag=C9E97_RS16095;product=chorismate mutase;protein_id=WP_023258191.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	pseudogene	235212	235366	.	+	.	ID=gene-C9E97_RS23845;Name=C9E97_RS23845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23845;pseudo=true
NZ_PYKA01000109.1	Protein Homology	CDS	235212	235366	.	+	0	ID=cds-C9E97_RS23845;Parent=gene-C9E97_RS23845;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460234.1;locus_tag=C9E97_RS23845;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	235445	235693	.	+	.	ID=gene-C9E97_RS16100;Name=C9E97_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16100;old_locus_tag=C9E97_16460
NZ_PYKA01000109.1	Protein Homology	CDS	235445	235693	.	+	0	ID=cds-WP_000208086.1;Parent=gene-C9E97_RS16100;Dbxref=GenBank:WP_000208086.1;Name=WP_000208086.1;Ontology_term=GO:0071468,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460233.1;locus_tag=C9E97_RS16100;product=biofilm/acid-resistance regulator YmgB/AriR;protein_id=WP_000208086.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	235948	236796	.	-	.	ID=gene-C9E97_RS16105;Name=C9E97_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16105;old_locus_tag=C9E97_16465
NZ_PYKA01000109.1	Protein Homology	CDS	235948	236796	.	-	0	ID=cds-WP_000190263.1;Parent=gene-C9E97_RS16105;Dbxref=GenBank:WP_000190263.1;Name=WP_000190263.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460232.1;locus_tag=C9E97_RS16105;product=MerR family transcriptional regulator;protein_id=WP_000190263.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	236865	237458	.	-	.	ID=gene-C9E97_RS16110;Name=C9E97_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16110;old_locus_tag=C9E97_16470
NZ_PYKA01000109.1	Protein Homology	CDS	236865	237458	.	-	0	ID=cds-WP_001576140.1;Parent=gene-C9E97_RS16110;Dbxref=GenBank:WP_001576140.1;Name=WP_001576140.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460231.1;locus_tag=C9E97_RS16110;product=helix-turn-helix domain-containing protein;protein_id=WP_001576140.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	237603	238391	.	-	.	ID=gene-C9E97_RS16115;Name=aadA;gbkey=Gene;gene=aadA;gene_biotype=protein_coding;locus_tag=C9E97_RS16115;old_locus_tag=C9E97_16475
NZ_PYKA01000109.1	Protein Homology	CDS	237603	238391	.	-	0	ID=cds-WP_135369593.1;Parent=gene-C9E97_RS16115;Dbxref=GenBank:WP_135369593.1;Name=WP_135369593.1;gbkey=CDS;gene=aadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460230.1;locus_tag=C9E97_RS16115;product=cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9);protein_id=WP_135369593.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	238500	239147	.	-	.	ID=gene-C9E97_RS16120;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=C9E97_RS16120;old_locus_tag=C9E97_16480
NZ_PYKA01000109.1	Protein Homology	CDS	238500	239147	.	-	0	ID=cds-WP_001574476.1;Parent=gene-C9E97_RS16120;Dbxref=GenBank:WP_001574476.1;Name=WP_001574476.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460229.3;locus_tag=C9E97_RS16120;product=metal-binding protein ZinT;protein_id=WP_001574476.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	239259	239335	.	-	.	ID=gene-C9E97_RS16125;Name=C9E97_RS16125;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS16125;old_locus_tag=C9E97_16485
NZ_PYKA01000109.1	tRNAscan-SE	tRNA	239259	239335	.	-	.	ID=rna-C9E97_RS16125;Parent=gene-C9E97_RS16125;anticodon=(pos:complement(239299..239301));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS16125;product=tRNA-Arg
NZ_PYKA01000109.1	tRNAscan-SE	exon	239259	239335	.	-	.	ID=exon-C9E97_RS16125-1;Parent=rna-C9E97_RS16125;anticodon=(pos:complement(239299..239301));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS16125;product=tRNA-Arg
NZ_PYKA01000109.1	RefSeq	gene	239344	239670	.	-	.	ID=gene-C9E97_RS16130;Name=C9E97_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16130;old_locus_tag=C9E97_16490
NZ_PYKA01000109.1	Protein Homology	CDS	239344	239670	.	-	0	ID=cds-WP_001183699.1;Parent=gene-C9E97_RS16130;Dbxref=GenBank:WP_001183699.1;Name=WP_001183699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460228.1;locus_tag=C9E97_RS16130;product=four-helix bundle copper-binding protein;protein_id=WP_001183699.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	239864	240997	.	+	.	ID=gene-C9E97_RS16135;Name=C9E97_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16135;old_locus_tag=C9E97_16495
NZ_PYKA01000109.1	Protein Homology	CDS	239864	240997	.	+	0	ID=cds-WP_050068351.1;Parent=gene-C9E97_RS16135;Dbxref=GenBank:WP_050068351.1;Name=WP_050068351.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460227.1;locus_tag=C9E97_RS16135;product=mechanosensitive ion channel family protein;protein_id=WP_050068351.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	241079	241669	.	-	.	ID=gene-C9E97_RS16140;Name=C9E97_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16140;old_locus_tag=C9E97_16500
NZ_PYKA01000109.1	Protein Homology	CDS	241079	241669	.	-	0	ID=cds-WP_050068350.1;Parent=gene-C9E97_RS16140;Dbxref=GenBank:WP_050068350.1;Name=WP_050068350.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460226.1;locus_tag=C9E97_RS16140;product=ATP-binding cassette domain-containing protein;protein_id=WP_050068350.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	241663	242460	.	-	.	ID=gene-C9E97_RS16145;Name=C9E97_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16145;old_locus_tag=C9E97_16505
NZ_PYKA01000109.1	Protein Homology	CDS	241663	242460	.	-	0	ID=cds-WP_135369592.1;Parent=gene-C9E97_RS16145;Dbxref=GenBank:WP_135369592.1;Name=WP_135369592.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460225.1;locus_tag=C9E97_RS16145;product=ATP-binding cassette domain-containing protein;protein_id=WP_135369592.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	242454	243266	.	-	.	ID=gene-C9E97_RS16150;Name=C9E97_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16150;old_locus_tag=C9E97_16510
NZ_PYKA01000109.1	Protein Homology	CDS	242454	243266	.	-	0	ID=cds-WP_000966644.1;Parent=gene-C9E97_RS16150;Dbxref=GenBank:WP_000966644.1;Name=WP_000966644.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460224.1;locus_tag=C9E97_RS16150;product=ABC transporter permease;protein_id=WP_000966644.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	243256	244230	.	-	.	ID=gene-C9E97_RS16155;Name=C9E97_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16155;old_locus_tag=C9E97_16515
NZ_PYKA01000109.1	Protein Homology	CDS	243256	244230	.	-	0	ID=cds-WP_001748353.1;Parent=gene-C9E97_RS16155;Dbxref=GenBank:WP_001748353.1;Name=WP_001748353.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460223.1;locus_tag=C9E97_RS16155;product=ABC transporter permease;protein_id=WP_001748353.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	244230	245864	.	-	.	ID=gene-C9E97_RS16160;Name=C9E97_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16160;old_locus_tag=C9E97_16520
NZ_PYKA01000109.1	Protein Homology	CDS	244230	245864	.	-	0	ID=cds-WP_077942330.1;Parent=gene-C9E97_RS16160;Dbxref=GenBank:WP_077942330.1;Name=WP_077942330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460222.1;locus_tag=C9E97_RS16160;product=ABC transporter substrate-binding protein;protein_id=WP_077942330.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	246546	246860	.	+	.	ID=gene-C9E97_RS16165;Name=C9E97_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16165;old_locus_tag=C9E97_16525
NZ_PYKA01000109.1	Protein Homology	CDS	246546	246860	.	+	0	ID=cds-WP_000182479.1;Parent=gene-C9E97_RS16165;Dbxref=GenBank:WP_000182479.1;Name=WP_000182479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460221.1;locus_tag=C9E97_RS16165;product=TRL-like family protein;protein_id=WP_000182479.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	247009	247539	.	+	.	ID=gene-C9E97_RS16170;Name=C9E97_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16170;old_locus_tag=C9E97_16530
NZ_PYKA01000109.1	Protein Homology	CDS	247009	247539	.	+	0	ID=cds-WP_000929980.1;Parent=gene-C9E97_RS16170;Dbxref=GenBank:WP_000929980.1;Name=WP_000929980.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460220.1;locus_tag=C9E97_RS16170;product=cytochrome b;protein_id=WP_000929980.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	247621	248664	.	-	.	ID=gene-C9E97_RS16175;Name=C9E97_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16175;old_locus_tag=C9E97_16535
NZ_PYKA01000109.1	Protein Homology	CDS	247621	248664	.	-	0	ID=cds-WP_135369591.1;Parent=gene-C9E97_RS16175;Dbxref=GenBank:WP_135369591.1;Name=WP_135369591.1;Ontology_term=GO:0005975,GO:0004308,GO:0016997;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA,alpha-sialidase activity|0016997||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460219.1;locus_tag=C9E97_RS16175;product=sialidase family protein;protein_id=WP_135369591.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	249003	249470	.	-	.	ID=gene-C9E97_RS16180;Name=C9E97_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16180;old_locus_tag=C9E97_16540
NZ_PYKA01000109.1	Protein Homology	CDS	249003	249470	.	-	0	ID=cds-WP_001218120.1;Parent=gene-C9E97_RS16180;Dbxref=GenBank:WP_001218120.1;Name=WP_001218120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460218.1;locus_tag=C9E97_RS16180;product=Hsp20 family protein;protein_id=WP_001218120.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	249622	249894	.	-	.	ID=gene-C9E97_RS16185;Name=C9E97_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16185;old_locus_tag=C9E97_16545
NZ_PYKA01000109.1	Protein Homology	CDS	249622	249894	.	-	0	ID=cds-WP_135369590.1;Parent=gene-C9E97_RS16185;Dbxref=GenBank:WP_135369590.1;Name=WP_135369590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460217.1;locus_tag=C9E97_RS16185;product=hypothetical protein;protein_id=WP_135369590.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	250597	250941	.	+	.	ID=gene-C9E97_RS16195;Name=C9E97_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16195;old_locus_tag=C9E97_16555
NZ_PYKA01000109.1	Protein Homology	CDS	250597	250941	.	+	0	ID=cds-WP_000977725.1;Parent=gene-C9E97_RS16195;Dbxref=GenBank:WP_000977725.1;Name=WP_000977725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460216.1;locus_tag=C9E97_RS16195;product=c-type lysozyme inhibitor;protein_id=WP_000977725.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	251696	251772	.	-	.	ID=gene-C9E97_RS16200;Name=C9E97_RS16200;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS16200;old_locus_tag=C9E97_16560
NZ_PYKA01000109.1	tRNAscan-SE	tRNA	251696	251772	.	-	.	ID=rna-C9E97_RS16200;Parent=gene-C9E97_RS16200;anticodon=(pos:complement(251736..251738));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS16200;product=tRNA-Arg
NZ_PYKA01000109.1	tRNAscan-SE	exon	251696	251772	.	-	.	ID=exon-C9E97_RS16200-1;Parent=rna-C9E97_RS16200;anticodon=(pos:complement(251736..251738));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS16200;product=tRNA-Arg
NZ_PYKA01000109.1	RefSeq	gene	252163	252720	.	-	.	ID=gene-C9E97_RS16205;Name=pagC;gbkey=Gene;gene=pagC;gene_biotype=protein_coding;locus_tag=C9E97_RS16205;old_locus_tag=C9E97_16565
NZ_PYKA01000109.1	Protein Homology	CDS	252163	252720	.	-	0	ID=cds-WP_023226910.1;Parent=gene-C9E97_RS16205;Dbxref=GenBank:WP_023226910.1;Name=WP_023226910.1;gbkey=CDS;gene=pagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460215.1;locus_tag=C9E97_RS16205;product=virulence membrane protein PagC;protein_id=WP_023226910.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	253526	253789	.	+	.	ID=gene-C9E97_RS16215;Name=pagD;gbkey=Gene;gene=pagD;gene_biotype=protein_coding;locus_tag=C9E97_RS16215;old_locus_tag=C9E97_16575
NZ_PYKA01000109.1	Protein Homology	CDS	253526	253789	.	+	0	ID=cds-WP_024148167.1;Parent=gene-C9E97_RS16215;Dbxref=GenBank:WP_024148167.1;Name=WP_024148167.1;gbkey=CDS;gene=pagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460214.1;locus_tag=C9E97_RS16215;product=virulence protein PagD;protein_id=WP_024148167.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	253921	254133	.	+	.	ID=gene-C9E97_RS16220;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=protein_coding;locus_tag=C9E97_RS16220;old_locus_tag=C9E97_16580
NZ_PYKA01000109.1	Protein Homology	CDS	253921	254133	.	+	0	ID=cds-WP_001537306.1;Parent=gene-C9E97_RS16220;Dbxref=GenBank:WP_001537306.1;Name=WP_001537306.1;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460213.1;locus_tag=C9E97_RS16220;product=cold shock-like protein CspF;protein_id=WP_001537306.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	254550	255071	.	+	.	ID=gene-C9E97_RS16225;Name=C9E97_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16225;old_locus_tag=C9E97_16585
NZ_PYKA01000109.1	Protein Homology	CDS	254550	255071	.	+	0	ID=cds-WP_001589112.1;Parent=gene-C9E97_RS16225;Dbxref=GenBank:WP_001589112.1;Name=WP_001589112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460212.1;locus_tag=C9E97_RS16225;product=RICIN domain-containing protein;protein_id=WP_001589112.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	255252	255491	.	+	.	ID=gene-C9E97_RS16230;Name=msgA;gbkey=Gene;gene=msgA;gene_biotype=protein_coding;locus_tag=C9E97_RS16230;old_locus_tag=C9E97_16590
NZ_PYKA01000109.1	Protein Homology	CDS	255252	255491	.	+	0	ID=cds-WP_000497451.1;Parent=gene-C9E97_RS16230;Dbxref=GenBank:WP_000497451.1;Name=WP_000497451.1;gbkey=CDS;gene=msgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460211.1;locus_tag=C9E97_RS16230;product=virulence protein MsgA;protein_id=WP_000497451.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	255981	256769	.	+	.	ID=gene-C9E97_RS16235;Name=envF;gbkey=Gene;gene=envF;gene_biotype=protein_coding;locus_tag=C9E97_RS16235;old_locus_tag=C9E97_16600
NZ_PYKA01000109.1	Protein Homology	CDS	255981	256769	.	+	0	ID=cds-WP_039590712.1;Parent=gene-C9E97_RS16235;Dbxref=GenBank:WP_039590712.1;Name=WP_039590712.1;gbkey=CDS;gene=envF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460210.1;locus_tag=C9E97_RS16235;product=putative envelope lipoprotein EnvF;protein_id=WP_039590712.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	gene	257091	257303	.	+	.	ID=gene-C9E97_RS23850;Name=C9E97_RS23850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23850;old_locus_tag=C9E97_16605
NZ_PYKA01000109.1	Protein Homology	CDS	257091	257303	.	+	0	ID=cds-WP_135369589.1;Parent=gene-C9E97_RS23850;Dbxref=GenBank:WP_135369589.1;Name=WP_135369589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000787630.1;locus_tag=C9E97_RS23850;product=hypothetical protein;protein_id=WP_135369589.1;transl_table=11
NZ_PYKA01000109.1	RefSeq	pseudogene	257954	258101	.	+	.	ID=gene-C9E97_RS23855;Name=C9E97_RS23855;end_range=258101,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23855;partial=true;pseudo=true
NZ_PYKA01000109.1	Protein Homology	CDS	257954	258101	.	+	0	ID=cds-C9E97_RS23855;Parent=gene-C9E97_RS23855;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=258101,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539657.1;locus_tag=C9E97_RS23855;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKA01000024.1 1 65554
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000024.1	RefSeq	region	1	65554	.	+	.	ID=NZ_PYKA01000024.1:1..65554;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000024.1	RefSeq	gene	36	410	.	+	.	ID=gene-C9E97_RS02985;Name=C9E97_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02985;old_locus_tag=C9E97_03075
NZ_PYKA01000024.1	Protein Homology	CDS	36	410	.	+	0	ID=cds-WP_057935550.1;Parent=gene-C9E97_RS02985;Dbxref=GenBank:WP_057935550.1;Name=WP_057935550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001213035.1;locus_tag=C9E97_RS02985;product=sel1 repeat family protein;protein_id=WP_057935550.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	779	1156	.	+	.	ID=gene-C9E97_RS02990;Name=C9E97_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02990;old_locus_tag=C9E97_03080
NZ_PYKA01000024.1	Protein Homology	CDS	779	1156	.	+	0	ID=cds-WP_061380351.1;Parent=gene-C9E97_RS02990;Dbxref=GenBank:WP_061380351.1;Name=WP_061380351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000357876.1;locus_tag=C9E97_RS02990;product=hypothetical protein;protein_id=WP_061380351.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	1351	1848	.	+	.	ID=gene-C9E97_RS02995;Name=C9E97_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02995;old_locus_tag=C9E97_03085
NZ_PYKA01000024.1	Protein Homology	CDS	1351	1848	.	+	0	ID=cds-WP_057935541.1;Parent=gene-C9E97_RS02995;Dbxref=GenBank:WP_057935541.1;Name=WP_057935541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000037626.1;locus_tag=C9E97_RS02995;product=hypothetical protein;protein_id=WP_057935541.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	pseudogene	1987	2187	.	+	.	ID=gene-C9E97_RS03000;Name=C9E97_RS03000;end_range=2187,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS03000;old_locus_tag=C9E97_03090;partial=true;pseudo=true
NZ_PYKA01000024.1	Protein Homology	CDS	1987	2187	.	+	0	ID=cds-C9E97_RS03000;Parent=gene-C9E97_RS03000;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2187,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=C9E97_RS03000;partial=true;product=IS1-like element transposase;pseudo=true;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	2360	3040	.	+	.	ID=gene-C9E97_RS03005;Name=C9E97_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03005;old_locus_tag=C9E97_03095
NZ_PYKA01000024.1	Protein Homology	CDS	2360	3040	.	+	0	ID=cds-WP_431194531.1;Parent=gene-C9E97_RS03005;Dbxref=GenBank:WP_431194531.1;Name=WP_431194531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001805504.1;locus_tag=C9E97_RS03005;product=hypothetical protein;protein_id=WP_431194531.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	3171	3890	.	-	.	ID=gene-C9E97_RS03010;Name=C9E97_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03010;old_locus_tag=C9E97_03100
NZ_PYKA01000024.1	Protein Homology	CDS	3171	3890	.	-	0	ID=cds-WP_135369542.1;Parent=gene-C9E97_RS03010;Dbxref=GenBank:WP_135369542.1;Name=WP_135369542.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586683.1;locus_tag=C9E97_RS03010;product=tetratricopeptide repeat protein;protein_id=WP_135369542.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	3895	6006	.	-	.	ID=gene-C9E97_RS03015;Name=C9E97_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03015;old_locus_tag=C9E97_03105
NZ_PYKA01000024.1	Protein Homology	CDS	3895	6006	.	-	0	ID=cds-WP_135369543.1;Parent=gene-C9E97_RS03015;Dbxref=GenBank:WP_135369543.1;Name=WP_135369543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=C9E97_RS03015;product=DUF4034 domain-containing protein;protein_id=WP_135369543.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	6017	6733	.	-	.	ID=gene-C9E97_RS03020;Name=C9E97_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03020;old_locus_tag=C9E97_03110
NZ_PYKA01000024.1	Protein Homology	CDS	6017	6733	.	-	0	ID=cds-WP_000498587.1;Parent=gene-C9E97_RS03020;Dbxref=GenBank:WP_000498587.1;Name=WP_000498587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461078.1;locus_tag=C9E97_RS03020;product=DUF1266 domain-containing protein;protein_id=WP_000498587.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	6733	7935	.	-	.	ID=gene-C9E97_RS03025;Name=C9E97_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03025;old_locus_tag=C9E97_03115
NZ_PYKA01000024.1	Protein Homology	CDS	6733	7935	.	-	0	ID=cds-WP_167850417.1;Parent=gene-C9E97_RS03025;Dbxref=GenBank:WP_167850417.1;Name=WP_167850417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141078.1;locus_tag=C9E97_RS03025;product=PcfJ domain-containing protein;protein_id=WP_167850417.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	8204	8926	.	-	.	ID=gene-C9E97_RS03035;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=C9E97_RS03035;old_locus_tag=C9E97_03125
NZ_PYKA01000024.1	Protein Homology	CDS	8204	8926	.	-	0	ID=cds-WP_000137854.1;Parent=gene-C9E97_RS03035;Dbxref=GenBank:WP_000137854.1;Name=WP_000137854.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461076.1;locus_tag=C9E97_RS03035;product=two-component system response regulator BaeR;protein_id=WP_000137854.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	8923	10326	.	-	.	ID=gene-C9E97_RS03040;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=C9E97_RS03040;old_locus_tag=C9E97_03130
NZ_PYKA01000024.1	Protein Homology	CDS	8923	10326	.	-	0	ID=cds-WP_000870081.1;Parent=gene-C9E97_RS03040;Dbxref=GenBank:WP_000870081.1;Name=WP_000870081.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461075.1;locus_tag=C9E97_RS03040;product=two-component system sensor histidine kinase BaeS;protein_id=WP_000870081.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	10326	11738	.	-	.	ID=gene-C9E97_RS03045;Name=C9E97_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03045;old_locus_tag=C9E97_03135
NZ_PYKA01000024.1	Protein Homology	CDS	10326	11738	.	-	0	ID=cds-WP_000137818.1;Parent=gene-C9E97_RS03045;Dbxref=GenBank:WP_000137818.1;Name=WP_000137818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461074.1;locus_tag=C9E97_RS03045;product=MFS transporter;protein_id=WP_000137818.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	11735	14815	.	-	.	ID=gene-C9E97_RS03050;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=C9E97_RS03050;old_locus_tag=C9E97_03140
NZ_PYKA01000024.1	Protein Homology	CDS	11735	14815	.	-	0	ID=cds-WP_135420195.1;Parent=gene-C9E97_RS03050;Dbxref=GenBank:WP_135420195.1;Name=WP_135420195.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461073.1;locus_tag=C9E97_RS03050;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_135420195.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	14816	17938	.	-	.	ID=gene-C9E97_RS03055;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=C9E97_RS03055;old_locus_tag=C9E97_03145
NZ_PYKA01000024.1	Protein Homology	CDS	14816	17938	.	-	0	ID=cds-WP_001197797.1;Parent=gene-C9E97_RS03055;Dbxref=GenBank:WP_001197797.1;Name=WP_001197797.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461072.1;locus_tag=C9E97_RS03055;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WP_001197797.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	17938	19179	.	-	.	ID=gene-C9E97_RS03060;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=C9E97_RS03060;old_locus_tag=C9E97_03150
NZ_PYKA01000024.1	Protein Homology	CDS	17938	19179	.	-	0	ID=cds-WP_135369371.1;Parent=gene-C9E97_RS03060;Dbxref=GenBank:WP_135369371.1;Name=WP_135369371.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461071.1;locus_tag=C9E97_RS03060;product=multidrug efflux RND transporter subunit MdtA;protein_id=WP_135369371.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	19462	19521	.	+	.	ID=gene-C9E97_RS03065;Name=C9E97_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03065
NZ_PYKA01000024.1	Protein Homology	CDS	19462	19521	.	+	0	ID=cds-WP_105887528.1;Parent=gene-C9E97_RS03065;Dbxref=GenBank:WP_105887528.1;Name=WP_105887528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=C9E97_RS03065;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_105887528.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	19620	20972	.	-	.	ID=gene-C9E97_RS03070;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=C9E97_RS03070;old_locus_tag=C9E97_03155
NZ_PYKA01000024.1	Protein Homology	CDS	19620	20972	.	-	0	ID=cds-WP_079954417.1;Parent=gene-C9E97_RS03070;Dbxref=GenBank:WP_079954417.1;Name=WP_079954417.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461070.1;locus_tag=C9E97_RS03070;product=molecular chaperone;protein_id=WP_079954417.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	21106	21975	.	+	.	ID=gene-C9E97_RS03075;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=C9E97_RS03075;old_locus_tag=C9E97_03165
NZ_PYKA01000024.1	Protein Homology	CDS	21106	21975	.	+	0	ID=cds-WP_135369372.1;Parent=gene-C9E97_RS03075;Dbxref=GenBank:WP_135369372.1;Name=WP_135369372.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461069.1;locus_tag=C9E97_RS03075;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_135369372.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	21943	24933	.	-	.	ID=gene-C9E97_RS03080;Name=C9E97_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03080;old_locus_tag=C9E97_03170
NZ_PYKA01000024.1	Protein Homology	CDS	21943	24933	.	-	0	ID=cds-WP_135369373.1;Parent=gene-C9E97_RS03080;Dbxref=GenBank:WP_135369373.1;Name=WP_135369373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461068.1;locus_tag=C9E97_RS03080;product=MASE1 domain-containing protein;protein_id=WP_135369373.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	25264	25905	.	+	.	ID=gene-C9E97_RS03085;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=C9E97_RS03085;old_locus_tag=C9E97_03175
NZ_PYKA01000024.1	Protein Homology	CDS	25264	25905	.	+	0	ID=cds-WP_000132082.1;Parent=gene-C9E97_RS03085;Dbxref=GenBank:WP_000132082.1;Name=WP_000132082.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461067.1;locus_tag=C9E97_RS03085;product=uridine kinase;protein_id=WP_000132082.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	25996	26577	.	+	.	ID=gene-C9E97_RS03090;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=C9E97_RS03090;old_locus_tag=C9E97_03180
NZ_PYKA01000024.1	Protein Homology	CDS	25996	26577	.	+	0	ID=cds-WP_001234783.1;Parent=gene-C9E97_RS03090;Dbxref=GenBank:WP_001234783.1;Name=WP_001234783.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=C9E97_RS03090;product=dCTP deaminase;protein_id=WP_001234783.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	26616	28472	.	+	.	ID=gene-C9E97_RS03095;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=C9E97_RS03095;old_locus_tag=C9E97_03185
NZ_PYKA01000024.1	Protein Homology	CDS	26616	28472	.	+	0	ID=cds-WP_135369374.1;Parent=gene-C9E97_RS03095;Dbxref=GenBank:WP_135369374.1;Name=WP_135369374.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461065.1;locus_tag=C9E97_RS03095;product=outer membrane assembly protein AsmA;protein_id=WP_135369374.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	28558	30138	.	-	.	ID=gene-C9E97_RS03100;Name=C9E97_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03100;old_locus_tag=C9E97_03190
NZ_PYKA01000024.1	Protein Homology	CDS	28558	30138	.	-	0	ID=cds-WP_000454713.1;Parent=gene-C9E97_RS03100;Dbxref=GenBank:WP_000454713.1;Name=WP_000454713.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461064.1;locus_tag=C9E97_RS03100;product=TerC family protein;protein_id=WP_000454713.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	30813	31952	.	+	.	ID=gene-C9E97_RS03105;Name=C9E97_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03105;old_locus_tag=C9E97_03200
NZ_PYKA01000024.1	Protein Homology	CDS	30813	31952	.	+	0	ID=cds-WP_000978077.1;Parent=gene-C9E97_RS03105;Dbxref=GenBank:WP_000978077.1;Name=WP_000978077.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=C9E97_RS03105;product=polysaccharide export protein;protein_id=WP_000978077.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	31958	32407	.	+	.	ID=gene-C9E97_RS03110;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=C9E97_RS03110;old_locus_tag=C9E97_03205
NZ_PYKA01000024.1	Protein Homology	CDS	31958	32407	.	+	0	ID=cds-WP_000482224.1;Parent=gene-C9E97_RS03110;Dbxref=GenBank:WP_000482224.1;Name=WP_000482224.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461062.1;locus_tag=C9E97_RS03110;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_000482224.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	32404	34563	.	+	.	ID=gene-C9E97_RS03115;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=C9E97_RS03115;old_locus_tag=C9E97_03210
NZ_PYKA01000024.1	Protein Homology	CDS	32404	34563	.	+	0	ID=cds-WP_135369705.1;Parent=gene-C9E97_RS03115;Dbxref=GenBank:WP_135369705.1;Name=WP_135369705.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461061.1;locus_tag=C9E97_RS03115;product=tyrosine-protein kinase Wzc;protein_id=WP_135369705.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	34650	35492	.	+	.	ID=gene-C9E97_RS03120;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=C9E97_RS03120;old_locus_tag=C9E97_03215
NZ_PYKA01000024.1	Protein Homology	CDS	34650	35492	.	+	0	ID=cds-WP_000205695.1;Parent=gene-C9E97_RS03120;Dbxref=GenBank:WP_000205695.1;Name=WP_000205695.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=C9E97_RS03120;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WP_000205695.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	35495	35983	.	+	.	ID=gene-C9E97_RS03125;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=C9E97_RS03125;old_locus_tag=C9E97_03220
NZ_PYKA01000024.1	Protein Homology	CDS	35495	35983	.	+	0	ID=cds-WP_000888725.1;Parent=gene-C9E97_RS03125;Dbxref=GenBank:WP_000888725.1;Name=WP_000888725.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461059.1;locus_tag=C9E97_RS03125;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WP_000888725.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	35980	37197	.	+	.	ID=gene-C9E97_RS03130;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=C9E97_RS03130;old_locus_tag=C9E97_03225
NZ_PYKA01000024.1	Protein Homology	CDS	35980	37197	.	+	0	ID=cds-WP_023261720.1;Parent=gene-C9E97_RS03130;Dbxref=GenBank:WP_023261720.1;Name=WP_023261720.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461058.1;locus_tag=C9E97_RS03130;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WP_023261720.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	37172	38386	.	+	.	ID=gene-C9E97_RS03135;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=C9E97_RS03135;old_locus_tag=C9E97_03230
NZ_PYKA01000024.1	Protein Homology	CDS	37172	38386	.	+	0	ID=cds-WP_000091403.1;Parent=gene-C9E97_RS03135;Dbxref=GenBank:WP_000091403.1;Name=WP_000091403.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461057.1;locus_tag=C9E97_RS03135;product=colanic acid polymerase WcaD;protein_id=WP_000091403.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	38399	39145	.	+	.	ID=gene-C9E97_RS03140;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=C9E97_RS03140;old_locus_tag=C9E97_03235
NZ_PYKA01000024.1	Protein Homology	CDS	38399	39145	.	+	0	ID=cds-WP_135369706.1;Parent=gene-C9E97_RS03140;Dbxref=GenBank:WP_135369706.1;Name=WP_135369706.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461056.1;locus_tag=C9E97_RS03140;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WP_135369706.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	39161	39715	.	+	.	ID=gene-C9E97_RS03145;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=C9E97_RS03145;old_locus_tag=C9E97_03240
NZ_PYKA01000024.1	Protein Homology	CDS	39161	39715	.	+	0	ID=cds-WP_001153601.1;Parent=gene-C9E97_RS03145;Dbxref=GenBank:WP_001153601.1;Name=WP_001153601.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461055.1;locus_tag=C9E97_RS03145;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WP_001153601.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	39739	40860	.	+	.	ID=gene-C9E97_RS03150;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=C9E97_RS03150;old_locus_tag=C9E97_03245
NZ_PYKA01000024.1	Protein Homology	CDS	39739	40860	.	+	0	ID=cds-WP_000048160.1;Parent=gene-C9E97_RS03150;Dbxref=GenBank:WP_000048160.1;Name=WP_000048160.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=C9E97_RS03150;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_000048160.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	40863	41828	.	+	.	ID=gene-C9E97_RS03155;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=C9E97_RS03155;old_locus_tag=C9E97_03250
NZ_PYKA01000024.1	Protein Homology	CDS	40863	41828	.	+	0	ID=cds-WP_001041701.1;Parent=gene-C9E97_RS03155;Dbxref=GenBank:WP_001041701.1;Name=WP_001041701.1;Ontology_term=GO:0042351,GO:0016853,GO:0050577;gbkey=CDS;gene=fcl;go_function=isomerase activity|0016853||IEA,GDP-L-fucose synthase activity|0050577||IEA;go_process='de novo' GDP-L-fucose biosynthetic process|0042351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461053.1;locus_tag=C9E97_RS03155;product=GDP-L-fucose synthase;protein_id=WP_001041701.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	41831	42304	.	+	.	ID=gene-C9E97_RS03160;Name=C9E97_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03160;old_locus_tag=C9E97_03255
NZ_PYKA01000024.1	Protein Homology	CDS	41831	42304	.	+	0	ID=cds-WP_001669238.1;Parent=gene-C9E97_RS03160;Dbxref=GenBank:WP_001669238.1;Name=WP_001669238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526160.1;locus_tag=C9E97_RS03160;product=GDP-mannose mannosyl hydrolase;protein_id=WP_001669238.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	42301	43524	.	+	.	ID=gene-C9E97_RS03165;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=C9E97_RS03165;old_locus_tag=C9E97_03260
NZ_PYKA01000024.1	Protein Homology	CDS	42301	43524	.	+	0	ID=cds-WP_135369707.1;Parent=gene-C9E97_RS03165;Dbxref=GenBank:WP_135369707.1;Name=WP_135369707.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461051.1;locus_tag=C9E97_RS03165;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WP_135369707.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	43521	44963	.	+	.	ID=gene-C9E97_RS03170;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=C9E97_RS03170;old_locus_tag=C9E97_03265
NZ_PYKA01000024.1	Protein Homology	CDS	43521	44963	.	+	0	ID=cds-WP_000605946.1;Parent=gene-C9E97_RS03170;Dbxref=GenBank:WP_000605946.1;Name=WP_000605946.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461050.3;locus_tag=C9E97_RS03170;product=mannose-1-phosphate guanyltransferase;protein_id=WP_000605946.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	45074	46444	.	+	.	ID=gene-C9E97_RS03175;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=C9E97_RS03175;old_locus_tag=C9E97_03270
NZ_PYKA01000024.1	Protein Homology	CDS	45074	46444	.	+	0	ID=cds-WP_080184650.1;Parent=gene-C9E97_RS03175;Dbxref=GenBank:WP_080184650.1;Name=WP_080184650.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=C9E97_RS03175;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WP_080184650.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	46498	47892	.	+	.	ID=gene-C9E97_RS03180;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=C9E97_RS03180;old_locus_tag=C9E97_03275
NZ_PYKA01000024.1	Protein Homology	CDS	46498	47892	.	+	0	ID=cds-WP_135369708.1;Parent=gene-C9E97_RS03180;Dbxref=GenBank:WP_135369708.1;Name=WP_135369708.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461048.1;locus_tag=C9E97_RS03180;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_135369708.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	47994	49472	.	+	.	ID=gene-C9E97_RS03185;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=C9E97_RS03185;old_locus_tag=C9E97_03280
NZ_PYKA01000024.1	Protein Homology	CDS	47994	49472	.	+	0	ID=cds-WP_023139021.1;Parent=gene-C9E97_RS03185;Dbxref=GenBank:WP_023139021.1;Name=WP_023139021.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461047.1;locus_tag=C9E97_RS03185;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=WP_023139021.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	49494	50774	.	+	.	ID=gene-C9E97_RS03190;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=C9E97_RS03190;old_locus_tag=C9E97_03285
NZ_PYKA01000024.1	Protein Homology	CDS	49494	50774	.	+	0	ID=cds-WP_020839236.1;Parent=gene-C9E97_RS03190;Dbxref=GenBank:WP_020839236.1;Name=WP_020839236.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=C9E97_RS03190;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_020839236.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	50771	51991	.	+	.	ID=gene-C9E97_RS03195;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=C9E97_RS03195;old_locus_tag=C9E97_03290
NZ_PYKA01000024.1	Protein Homology	CDS	50771	51991	.	+	0	ID=cds-WP_135369709.1;Parent=gene-C9E97_RS03195;Dbxref=GenBank:WP_135369709.1;Name=WP_135369709.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461045.1;locus_tag=C9E97_RS03195;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WP_135369709.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	52002	53405	.	+	.	ID=gene-C9E97_RS03200;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=C9E97_RS03200;old_locus_tag=C9E97_03295
NZ_PYKA01000024.1	Protein Homology	CDS	52002	53405	.	+	0	ID=cds-WP_135369710.1;Parent=gene-C9E97_RS03200;Dbxref=GenBank:WP_135369710.1;Name=WP_135369710.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461044.1;locus_tag=C9E97_RS03200;product=colanic acid biosynthesis protein WcaM;protein_id=WP_135369710.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	53583	54476	.	+	.	ID=gene-C9E97_RS03205;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=C9E97_RS03205;old_locus_tag=C9E97_03300
NZ_PYKA01000024.1	Protein Homology	CDS	53583	54476	.	+	0	ID=cds-WP_000981469.1;Parent=gene-C9E97_RS03205;Dbxref=GenBank:WP_000981469.1;Name=WP_000981469.1;Ontology_term=GO:0006011,GO:0030234;gbkey=CDS;gene=galF;go_function=enzyme regulator activity|0030234||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461043.1;locus_tag=C9E97_RS03205;product=GalU regulator GalF;protein_id=WP_000981469.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	54853	55938	.	+	.	ID=gene-C9E97_RS03210;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=C9E97_RS03210;old_locus_tag=C9E97_03305
NZ_PYKA01000024.1	Protein Homology	CDS	54853	55938	.	+	0	ID=cds-WP_000697846.1;Parent=gene-C9E97_RS03210;Dbxref=GenBank:WP_000697846.1;Name=WP_000697846.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461042.1;locus_tag=C9E97_RS03210;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_000697846.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	55938	56837	.	+	.	ID=gene-C9E97_RS03215;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=C9E97_RS03215;old_locus_tag=C9E97_03310
NZ_PYKA01000024.1	Protein Homology	CDS	55938	56837	.	+	0	ID=cds-WP_001023664.1;Parent=gene-C9E97_RS03215;Dbxref=GenBank:WP_001023664.1;Name=WP_001023664.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461041.1;locus_tag=C9E97_RS03215;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_001023664.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	56885	57763	.	+	.	ID=gene-C9E97_RS03220;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=C9E97_RS03220;old_locus_tag=C9E97_03315
NZ_PYKA01000024.1	Protein Homology	CDS	56885	57763	.	+	0	ID=cds-WP_000857535.1;Parent=gene-C9E97_RS03220;Dbxref=GenBank:WP_000857535.1;Name=WP_000857535.1;Ontology_term=GO:0000271,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461040.1;locus_tag=C9E97_RS03220;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_000857535.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	57764	58315	.	+	.	ID=gene-C9E97_RS03225;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=C9E97_RS03225;old_locus_tag=C9E97_03320
NZ_PYKA01000024.1	Protein Homology	CDS	57764	58315	.	+	0	ID=cds-WP_000973710.1;Parent=gene-C9E97_RS03225;Dbxref=GenBank:WP_000973710.1;Name=WP_000973710.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461039.1;locus_tag=C9E97_RS03225;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_000973710.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	58321	59313	.	+	.	ID=gene-C9E97_RS03230;Name=C9E97_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03230;old_locus_tag=C9E97_03325
NZ_PYKA01000024.1	Protein Homology	CDS	58321	59313	.	+	0	ID=cds-WP_000018226.1;Parent=gene-C9E97_RS03230;Dbxref=GenBank:WP_000018226.1;Name=WP_000018226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461038.1;locus_tag=C9E97_RS03230;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;protein_id=WP_000018226.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	59310	60083	.	+	.	ID=gene-C9E97_RS03235;Name=rfbF;gbkey=Gene;gene=rfbF;gene_biotype=protein_coding;locus_tag=C9E97_RS03235;old_locus_tag=C9E97_03330
NZ_PYKA01000024.1	Protein Homology	CDS	59310	60083	.	+	0	ID=cds-WP_000648784.1;Parent=gene-C9E97_RS03235;Dbxref=GenBank:WP_000648784.1;Name=WP_000648784.1;Ontology_term=GO:0009243,GO:0047343;gbkey=CDS;gene=rfbF;go_function=glucose-1-phosphate cytidylyltransferase activity|0047343||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461037.1;locus_tag=C9E97_RS03235;product=glucose-1-phosphate cytidylyltransferase;protein_id=WP_000648784.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	60088	61167	.	+	.	ID=gene-C9E97_RS03240;Name=rfbG;gbkey=Gene;gene=rfbG;gene_biotype=protein_coding;locus_tag=C9E97_RS03240;old_locus_tag=C9E97_03335
NZ_PYKA01000024.1	Protein Homology	CDS	60088	61167	.	+	0	ID=cds-WP_000565903.1;Parent=gene-C9E97_RS03240;Dbxref=GenBank:WP_000565903.1;Name=WP_000565903.1;Ontology_term=GO:0009243,GO:0047733;gbkey=CDS;gene=rfbG;go_function=CDP-glucose 4%2C6-dehydratase activity|0047733||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461036.1;locus_tag=C9E97_RS03240;product=CDP-glucose 4%2C6-dehydratase;protein_id=WP_000565903.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	61194	62507	.	+	.	ID=gene-C9E97_RS03245;Name=rfbH;gbkey=Gene;gene=rfbH;gene_biotype=protein_coding;locus_tag=C9E97_RS03245;old_locus_tag=C9E97_03340
NZ_PYKA01000024.1	Protein Homology	CDS	61194	62507	.	+	0	ID=cds-WP_000126349.1;Parent=gene-C9E97_RS03245;Dbxref=GenBank:WP_000126349.1;Name=WP_000126349.1;Ontology_term=GO:0003824;gbkey=CDS;gene=rfbH;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461035.1;locus_tag=C9E97_RS03245;product=lipopolysaccharide biosynthesis protein RfbH;protein_id=WP_000126349.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	62535	63434	.	+	.	ID=gene-C9E97_RS03250;Name=rfbJ;gbkey=Gene;gene=rfbJ;gene_biotype=protein_coding;locus_tag=C9E97_RS03250;old_locus_tag=C9E97_03345
NZ_PYKA01000024.1	Protein Homology	CDS	62535	63434	.	+	0	ID=cds-WP_000143399.1;Parent=gene-C9E97_RS03250;Dbxref=GenBank:WP_000143399.1;Name=WP_000143399.1;gbkey=CDS;gene=rfbJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461034.1;locus_tag=C9E97_RS03250;product=CDP-abequose synthase;protein_id=WP_000143399.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	63516	64808	.	+	.	ID=gene-C9E97_RS03255;Name=C9E97_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03255;old_locus_tag=C9E97_03350
NZ_PYKA01000024.1	Protein Homology	CDS	63516	64808	.	+	0	ID=cds-WP_080110891.1;Parent=gene-C9E97_RS03255;Dbxref=GenBank:WP_080110891.1;Name=WP_080110891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461033.1;locus_tag=C9E97_RS03255;product=MATE family efflux transporter;protein_id=WP_080110891.1;transl_table=11
NZ_PYKA01000024.1	RefSeq	gene	64813	65554	.	+	.	ID=gene-C9E97_RS03260;Name=rfbV;end_range=65554,.;gbkey=Gene;gene=rfbV;gene_biotype=protein_coding;locus_tag=C9E97_RS03260;old_locus_tag=C9E97_03355;partial=true
NZ_PYKA01000024.1	Protein Homology	CDS	64813	65554	.	+	0	ID=cds-WP_135495695.1;Parent=gene-C9E97_RS03260;Dbxref=GenBank:WP_135495695.1;Name=WP_135495695.1;end_range=65554,.;gbkey=CDS;gene=rfbV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461032.1;locus_tag=C9E97_RS03260;partial=true;product=abequosyltransferase RfbV;protein_id=WP_135495695.1;transl_table=11
##sequence-region NZ_PYKA01000122.1 1 62381
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000122.1	RefSeq	region	1	62381	.	+	.	ID=NZ_PYKA01000122.1:1..62381;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000122.1	RefSeq	gene	245	1168	.	-	.	ID=gene-C9E97_RS19555;Name=C9E97_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19555;old_locus_tag=C9E97_20010
NZ_PYKA01000122.1	Protein Homology	CDS	245	1168	.	-	0	ID=cds-WP_000540891.1;Parent=gene-C9E97_RS19555;Dbxref=GenBank:WP_000540891.1;Name=WP_000540891.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462047.1;locus_tag=C9E97_RS19555;product=polysaccharide deacetylase family protein;protein_id=WP_000540891.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	1207	2085	.	-	.	ID=gene-C9E97_RS19560;Name=C9E97_RS19560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19560;old_locus_tag=C9E97_20015
NZ_PYKA01000122.1	Protein Homology	CDS	1207	2085	.	-	0	ID=cds-WP_031604978.1;Parent=gene-C9E97_RS19560;Dbxref=GenBank:WP_031604978.1;Name=WP_031604978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462048.1;locus_tag=C9E97_RS19560;product=carbon-nitrogen hydrolase family protein;protein_id=WP_031604978.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	2481	3785	.	-	.	ID=gene-C9E97_RS19565;Name=C9E97_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19565;old_locus_tag=C9E97_20020
NZ_PYKA01000122.1	Protein Homology	CDS	2481	3785	.	-	0	ID=cds-WP_000784371.1;Parent=gene-C9E97_RS19565;Dbxref=GenBank:WP_000784371.1;Name=WP_000784371.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462049.1;locus_tag=C9E97_RS19565;product=MFS transporter;protein_id=WP_000784371.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	4190	5374	.	+	.	ID=gene-C9E97_RS19570;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=C9E97_RS19570;old_locus_tag=C9E97_20025
NZ_PYKA01000122.1	Protein Homology	CDS	4190	5374	.	+	0	ID=cds-WP_000815487.1;Parent=gene-C9E97_RS19570;Dbxref=GenBank:WP_000815487.1;Name=WP_000815487.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462050.1;locus_tag=C9E97_RS19570;product=mannonate dehydratase;protein_id=WP_000815487.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	5485	6957	.	+	.	ID=gene-C9E97_RS19575;Name=C9E97_RS19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19575;old_locus_tag=C9E97_20030
NZ_PYKA01000122.1	Protein Homology	CDS	5485	6957	.	+	0	ID=cds-WP_000437127.1;Parent=gene-C9E97_RS19575;Dbxref=GenBank:WP_000437127.1;Name=WP_000437127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462051.1;locus_tag=C9E97_RS19575;product=fructuronate reductase;protein_id=WP_000437127.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	6969	8381	.	+	.	ID=gene-C9E97_RS19580;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=C9E97_RS19580;old_locus_tag=C9E97_20035
NZ_PYKA01000122.1	Protein Homology	CDS	6969	8381	.	+	0	ID=cds-WP_135369177.1;Parent=gene-C9E97_RS19580;Dbxref=GenBank:WP_135369177.1;Name=WP_135369177.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462052.1;locus_tag=C9E97_RS19580;product=glucuronate isomerase;protein_id=WP_135369177.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	8681	9739	.	-	.	ID=gene-C9E97_RS19585;Name=C9E97_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19585;old_locus_tag=C9E97_20040
NZ_PYKA01000122.1	Protein Homology	CDS	8681	9739	.	-	0	ID=cds-WP_135369176.1;Parent=gene-C9E97_RS19585;Dbxref=GenBank:WP_135369176.1;Name=WP_135369176.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA,zinc ion binding|0008270||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462053.1;locus_tag=C9E97_RS19585;product=methyl-accepting chemotaxis protein;protein_id=WP_135369176.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	10409	12265	.	-	.	ID=gene-C9E97_RS19595;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=C9E97_RS19595;old_locus_tag=C9E97_20050
NZ_PYKA01000122.1	Protein Homology	CDS	10409	12265	.	-	0	ID=cds-WP_000033690.1;Parent=gene-C9E97_RS19595;Dbxref=GenBank:WP_000033690.1;Name=WP_000033690.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462054.1;locus_tag=C9E97_RS19595;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_000033690.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	12492	13358	.	+	.	ID=gene-C9E97_RS19600;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=C9E97_RS19600;old_locus_tag=C9E97_20055
NZ_PYKA01000122.1	Protein Homology	CDS	12492	13358	.	+	0	ID=cds-WP_023207094.1;Parent=gene-C9E97_RS19600;Dbxref=GenBank:WP_023207094.1;Name=WP_023207094.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462055.1;locus_tag=C9E97_RS19600;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_023207094.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	13426	14136	.	-	.	ID=gene-C9E97_RS19605;Name=C9E97_RS19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19605;old_locus_tag=C9E97_20060
NZ_PYKA01000122.1	Protein Homology	CDS	13426	14136	.	-	0	ID=cds-WP_001626693.1;Parent=gene-C9E97_RS19605;Dbxref=GenBank:WP_001626693.1;Name=WP_001626693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462056.1;locus_tag=C9E97_RS19605;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_001626693.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	14136	15188	.	-	.	ID=gene-C9E97_RS19610;Name=C9E97_RS19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19610;old_locus_tag=C9E97_20065
NZ_PYKA01000122.1	Protein Homology	CDS	14136	15188	.	-	0	ID=cds-WP_023244900.1;Parent=gene-C9E97_RS19610;Dbxref=GenBank:WP_023244900.1;Name=WP_023244900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462057.1;locus_tag=C9E97_RS19610;product=ABC transporter substrate-binding protein;protein_id=WP_023244900.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	15264	15512	.	-	.	ID=gene-C9E97_RS19615;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=C9E97_RS19615;old_locus_tag=C9E97_20070
NZ_PYKA01000122.1	Protein Homology	CDS	15264	15512	.	-	0	ID=cds-WP_000334887.1;Parent=gene-C9E97_RS19615;Dbxref=GenBank:WP_000334887.1;Name=WP_000334887.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462058.1;locus_tag=C9E97_RS19615;product=hydrogenase maturation factor HybG;protein_id=WP_000334887.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	15540	15881	.	-	.	ID=gene-C9E97_RS19620;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=C9E97_RS19620;old_locus_tag=C9E97_20075
NZ_PYKA01000122.1	Protein Homology	CDS	15540	15881	.	-	0	ID=cds-WP_000544946.1;Parent=gene-C9E97_RS19620;Dbxref=GenBank:WP_000544946.1;Name=WP_000544946.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462059.1;locus_tag=C9E97_RS19620;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544946.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	15874	16362	.	-	.	ID=gene-C9E97_RS19625;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=C9E97_RS19625;old_locus_tag=C9E97_20080
NZ_PYKA01000122.1	Protein Homology	CDS	15874	16362	.	-	0	ID=cds-WP_000004951.1;Parent=gene-C9E97_RS19625;Dbxref=GenBank:WP_000004951.1;Name=WP_000004951.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462060.1;locus_tag=C9E97_RS19625;product=hydrogenase-2 assembly chaperone;protein_id=WP_000004951.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	16355	16849	.	-	.	ID=gene-C9E97_RS19630;Name=C9E97_RS19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19630;old_locus_tag=C9E97_20085
NZ_PYKA01000122.1	Protein Homology	CDS	16355	16849	.	-	0	ID=cds-WP_001221960.1;Parent=gene-C9E97_RS19630;Dbxref=GenBank:WP_001221960.1;Name=WP_001221960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462061.1;locus_tag=C9E97_RS19630;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_001221960.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	16849	18552	.	-	.	ID=gene-C9E97_RS19635;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=C9E97_RS19635;old_locus_tag=C9E97_20090
NZ_PYKA01000122.1	Protein Homology	CDS	16849	18552	.	-	0	ID=cds-WP_000083044.1;Parent=gene-C9E97_RS19635;Dbxref=GenBank:WP_000083044.1;Name=WP_000083044.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462062.1;locus_tag=C9E97_RS19635;product=hydrogenase 2 large subunit;protein_id=WP_000083044.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	18549	19727	.	-	.	ID=gene-C9E97_RS19640;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=C9E97_RS19640;old_locus_tag=C9E97_20095
NZ_PYKA01000122.1	Protein Homology	CDS	18549	19727	.	-	0	ID=cds-WP_000017678.1;Parent=gene-C9E97_RS19640;Dbxref=GenBank:WP_000017678.1;Name=WP_000017678.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462063.1;locus_tag=C9E97_RS19640;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_000017678.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	19717	20703	.	-	.	ID=gene-C9E97_RS19645;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=C9E97_RS19645;old_locus_tag=C9E97_20100
NZ_PYKA01000122.1	Protein Homology	CDS	19717	20703	.	-	0	ID=cds-WP_001081721.1;Parent=gene-C9E97_RS19645;Dbxref=GenBank:WP_001081721.1;Name=WP_001081721.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462064.1;locus_tag=C9E97_RS19645;product=hydrogenase 2 operon protein HybA;protein_id=WP_001081721.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	20706	21824	.	-	.	ID=gene-C9E97_RS19650;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=C9E97_RS19650;old_locus_tag=C9E97_20105
NZ_PYKA01000122.1	Protein Homology	CDS	20706	21824	.	-	0	ID=cds-WP_000145429.1;Parent=gene-C9E97_RS19650;Dbxref=GenBank:WP_000145429.1;Name=WP_000145429.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462065.1;locus_tag=C9E97_RS19650;product=hydrogenase 2 small subunit;protein_id=WP_000145429.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	22014	22301	.	-	.	ID=gene-C9E97_RS19655;Name=C9E97_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19655;old_locus_tag=C9E97_20115
NZ_PYKA01000122.1	Protein Homology	CDS	22014	22301	.	-	0	ID=cds-WP_001059119.1;Parent=gene-C9E97_RS19655;Dbxref=GenBank:WP_001059119.1;Name=WP_001059119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462066.1;locus_tag=C9E97_RS19655;product=DUF2623 family protein;protein_id=WP_001059119.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	22386	24029	.	-	.	ID=gene-C9E97_RS19660;Name=C9E97_RS19660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19660;old_locus_tag=C9E97_20120
NZ_PYKA01000122.1	Protein Homology	CDS	22386	24029	.	-	0	ID=cds-WP_001238434.1;Parent=gene-C9E97_RS19660;Dbxref=GenBank:WP_001238434.1;Name=WP_001238434.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=C9E97_RS19660;product=methyl-accepting chemotaxis protein;protein_id=WP_001238434.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	24336	24830	.	-	.	ID=gene-C9E97_RS19665;Name=C9E97_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19665;old_locus_tag=C9E97_20125
NZ_PYKA01000122.1	Protein Homology	CDS	24336	24830	.	-	0	ID=cds-WP_000439335.1;Parent=gene-C9E97_RS19665;Dbxref=GenBank:WP_000439335.1;Name=WP_000439335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462068.1;locus_tag=C9E97_RS19665;product=TIGR00645 family protein;protein_id=WP_000439335.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	25048	25551	.	-	.	ID=gene-C9E97_RS19670;Name=C9E97_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19670;old_locus_tag=C9E97_20130
NZ_PYKA01000122.1	Protein Homology	CDS	25048	25551	.	-	0	ID=cds-WP_001650708.1;Parent=gene-C9E97_RS19670;Dbxref=GenBank:WP_001650708.1;Name=WP_001650708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441059.1;locus_tag=C9E97_RS19670;product=ESA_00282 family adhesion-associated protein;protein_id=WP_001650708.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	25655	26065	.	+	.	ID=gene-C9E97_RS19675;Name=C9E97_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19675;old_locus_tag=C9E97_20135
NZ_PYKA01000122.1	Protein Homology	CDS	25655	26065	.	+	0	ID=cds-WP_023221306.1;Parent=gene-C9E97_RS19675;Dbxref=GenBank:WP_023221306.1;Name=WP_023221306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462070.1;locus_tag=C9E97_RS19675;product=hypothetical protein;protein_id=WP_023221306.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	26052	26456	.	+	.	ID=gene-C9E97_RS19680;Name=C9E97_RS19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19680;old_locus_tag=C9E97_20140
NZ_PYKA01000122.1	Protein Homology	CDS	26052	26456	.	+	0	ID=cds-WP_021294050.1;Parent=gene-C9E97_RS19680;Dbxref=GenBank:WP_021294050.1;Name=WP_021294050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462071.1;locus_tag=C9E97_RS19680;product=hypothetical protein;protein_id=WP_021294050.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	26580	27464	.	+	.	ID=gene-C9E97_RS19685;Name=C9E97_RS19685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19685;old_locus_tag=C9E97_20145
NZ_PYKA01000122.1	Protein Homology	CDS	26580	27464	.	+	0	ID=cds-WP_000019032.1;Parent=gene-C9E97_RS19685;Dbxref=GenBank:WP_000019032.1;Name=WP_000019032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462072.1;locus_tag=C9E97_RS19685;product=SDR family oxidoreductase;protein_id=WP_000019032.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	27577	28002	.	-	.	ID=gene-C9E97_RS19690;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=C9E97_RS19690;old_locus_tag=C9E97_20150
NZ_PYKA01000122.1	Protein Homology	CDS	27577	28002	.	-	0	ID=cds-WP_001251476.1;Parent=gene-C9E97_RS19690;Dbxref=GenBank:WP_001251476.1;Name=WP_001251476.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462073.1;locus_tag=C9E97_RS19690;product=TonB system transport protein ExbD;protein_id=WP_001251476.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	28009	28743	.	-	.	ID=gene-C9E97_RS19695;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=C9E97_RS19695;old_locus_tag=C9E97_20155
NZ_PYKA01000122.1	Protein Homology	CDS	28009	28743	.	-	0	ID=cds-WP_000527859.1;Parent=gene-C9E97_RS19695;Dbxref=GenBank:WP_000527859.1;Name=WP_000527859.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462074.1;locus_tag=C9E97_RS19695;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_000527859.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	28995	30182	.	+	.	ID=gene-C9E97_RS19700;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=C9E97_RS19700;old_locus_tag=C9E97_20165
NZ_PYKA01000122.1	Protein Homology	CDS	28995	30182	.	+	0	ID=cds-WP_000130270.1;Parent=gene-C9E97_RS19700;Dbxref=GenBank:WP_000130270.1;Name=WP_000130270.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462076.1;locus_tag=C9E97_RS19700;product=cystathionine beta-lyase;protein_id=WP_000130270.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	30322	30981	.	+	.	ID=gene-C9E97_RS19705;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=C9E97_RS19705;old_locus_tag=C9E97_20170
NZ_PYKA01000122.1	Protein Homology	CDS	30322	30981	.	+	0	ID=cds-WP_000268444.1;Parent=gene-C9E97_RS19705;Dbxref=GenBank:WP_000268444.1;Name=WP_000268444.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462077.1;locus_tag=C9E97_RS19705;product=DedA family general envelope maintenance protein YghB;protein_id=WP_000268444.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	31045	31944	.	-	.	ID=gene-C9E97_RS19710;Name=C9E97_RS19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19710;old_locus_tag=C9E97_20175
NZ_PYKA01000122.1	Protein Homology	CDS	31045	31944	.	-	0	ID=cds-WP_001078198.1;Parent=gene-C9E97_RS19710;Dbxref=GenBank:WP_001078198.1;Name=WP_001078198.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=C9E97_RS19710;product=AraC family transcriptional regulator;protein_id=WP_001078198.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	32137	33300	.	+	.	ID=gene-C9E97_RS19715;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=C9E97_RS19715;old_locus_tag=C9E97_20180
NZ_PYKA01000122.1	Protein Homology	CDS	32137	33300	.	+	0	ID=cds-WP_001058720.1;Parent=gene-C9E97_RS19715;Dbxref=GenBank:WP_001058720.1;Name=WP_001058720.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462079.1;locus_tag=C9E97_RS19715;product=alcohol dehydrogenase;protein_id=WP_001058720.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	33406	34233	.	+	.	ID=gene-C9E97_RS19720;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=C9E97_RS19720;old_locus_tag=C9E97_20185
NZ_PYKA01000122.1	Protein Homology	CDS	33406	34233	.	+	0	ID=cds-WP_023203797.1;Parent=gene-C9E97_RS19720;Dbxref=GenBank:WP_023203797.1;Name=WP_023203797.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=C9E97_RS19720;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_023203797.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	pseudogene	34399	35884	.	+	.	ID=gene-C9E97_RS19725;Name=C9E97_RS19725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS19725;old_locus_tag=C9E97_20190;pseudo=true
NZ_PYKA01000122.1	Protein Homology	CDS	34399	35884	.	+	0	ID=cds-C9E97_RS19725;Parent=gene-C9E97_RS19725;Note=frameshifted;Ontology_term=GO:0006820,GO:0008509,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462081.3;locus_tag=C9E97_RS19725;product=DASS family sodium-coupled anion symporter;pseudo=true;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	35929	36384	.	+	.	ID=gene-C9E97_RS19730;Name=C9E97_RS19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19730;old_locus_tag=C9E97_20195
NZ_PYKA01000122.1	Protein Homology	CDS	35929	36384	.	+	0	ID=cds-WP_000128242.1;Parent=gene-C9E97_RS19730;Dbxref=GenBank:WP_000128242.1;Name=WP_000128242.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462082.1;locus_tag=C9E97_RS19730;product=HIT family protein;protein_id=WP_000128242.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	36542	36736	.	-	.	ID=gene-C9E97_RS19740;Name=C9E97_RS19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19740;old_locus_tag=C9E97_20200
NZ_PYKA01000122.1	GeneMarkS-2+	CDS	36542	36736	.	-	0	ID=cds-WP_000525382.1;Parent=gene-C9E97_RS19740;Dbxref=GenBank:WP_000525382.1;Name=WP_000525382.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E97_RS19740;product=hypothetical protein;protein_id=WP_000525382.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	36939	39110	.	-	.	ID=gene-C9E97_RS19745;Name=C9E97_RS19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19745;old_locus_tag=C9E97_20205
NZ_PYKA01000122.1	Protein Homology	CDS	36939	39110	.	-	0	ID=cds-WP_135369102.1;Parent=gene-C9E97_RS19745;Dbxref=GenBank:WP_135369102.1;Name=WP_135369102.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462083.1;locus_tag=C9E97_RS19745;product=YgiQ family radical SAM protein;protein_id=WP_135369102.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	39599	40582	.	+	.	ID=gene-C9E97_RS19750;Name=C9E97_RS19750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19750;old_locus_tag=C9E97_20210
NZ_PYKA01000122.1	Protein Homology	CDS	39599	40582	.	+	0	ID=cds-WP_000799370.1;Parent=gene-C9E97_RS19750;Dbxref=GenBank:WP_000799370.1;Name=WP_000799370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462084.1;locus_tag=C9E97_RS19750;product=TRAP transporter substrate-binding protein;protein_id=WP_000799370.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	40624	41106	.	+	.	ID=gene-C9E97_RS19755;Name=C9E97_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19755;old_locus_tag=C9E97_20215
NZ_PYKA01000122.1	Protein Homology	CDS	40624	41106	.	+	0	ID=cds-WP_001221828.1;Parent=gene-C9E97_RS19755;Dbxref=GenBank:WP_001221828.1;Name=WP_001221828.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462085.1;locus_tag=C9E97_RS19755;product=TRAP transporter small permease;protein_id=WP_001221828.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	41117	42424	.	+	.	ID=gene-C9E97_RS19760;Name=C9E97_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19760;old_locus_tag=C9E97_20220
NZ_PYKA01000122.1	Protein Homology	CDS	41117	42424	.	+	0	ID=cds-WP_135369101.1;Parent=gene-C9E97_RS19760;Dbxref=GenBank:WP_135369101.1;Name=WP_135369101.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462086.1;locus_tag=C9E97_RS19760;product=TRAP transporter large permease;protein_id=WP_135369101.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	42469	43881	.	-	.	ID=gene-C9E97_RS19765;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=C9E97_RS19765;old_locus_tag=C9E97_20225
NZ_PYKA01000122.1	Protein Homology	CDS	42469	43881	.	-	0	ID=cds-WP_000010658.1;Parent=gene-C9E97_RS19765;Dbxref=GenBank:WP_000010658.1;Name=WP_000010658.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462087.1;locus_tag=C9E97_RS19765;product=cell division protein FtsP;protein_id=WP_000010658.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	43955	44692	.	-	.	ID=gene-C9E97_RS19770;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=C9E97_RS19770;old_locus_tag=C9E97_20230
NZ_PYKA01000122.1	Protein Homology	CDS	43955	44692	.	-	0	ID=cds-WP_000965730.1;Parent=gene-C9E97_RS19770;Dbxref=GenBank:WP_000965730.1;Name=WP_000965730.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462088.1;locus_tag=C9E97_RS19770;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_000965730.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	44949	47207	.	-	.	ID=gene-C9E97_RS19775;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=C9E97_RS19775;old_locus_tag=C9E97_20235
NZ_PYKA01000122.1	Protein Homology	CDS	44949	47207	.	-	0	ID=cds-WP_001281855.1;Parent=gene-C9E97_RS19775;Dbxref=GenBank:WP_001281855.1;Name=WP_001281855.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462089.1;locus_tag=C9E97_RS19775;product=DNA topoisomerase IV subunit A;protein_id=WP_001281855.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	47318	48184	.	-	.	ID=gene-C9E97_RS19780;Name=C9E97_RS19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19780;old_locus_tag=C9E97_20240
NZ_PYKA01000122.1	Protein Homology	CDS	47318	48184	.	-	0	ID=cds-WP_000998795.1;Parent=gene-C9E97_RS19780;Dbxref=GenBank:WP_000998795.1;Name=WP_000998795.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462090.1;locus_tag=C9E97_RS19780;product=AraC family transcriptional regulator;protein_id=WP_000998795.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	48256	48648	.	-	.	ID=gene-C9E97_RS19785;Name=C9E97_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19785;old_locus_tag=C9E97_20245
NZ_PYKA01000122.1	Protein Homology	CDS	48256	48648	.	-	0	ID=cds-WP_000731552.1;Parent=gene-C9E97_RS19785;Dbxref=GenBank:WP_000731552.1;Name=WP_000731552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462091.1;locus_tag=C9E97_RS19785;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_000731552.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	48804	49463	.	+	.	ID=gene-C9E97_RS19790;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=C9E97_RS19790;old_locus_tag=C9E97_20250
NZ_PYKA01000122.1	Protein Homology	CDS	48804	49463	.	+	0	ID=cds-WP_001221574.1;Parent=gene-C9E97_RS19790;Dbxref=GenBank:WP_001221574.1;Name=WP_001221574.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462092.1;locus_tag=C9E97_RS19790;product=quorum sensing response regulator transcription factor QseB;protein_id=WP_001221574.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	49460	50809	.	+	.	ID=gene-C9E97_RS19795;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=C9E97_RS19795;old_locus_tag=C9E97_20255
NZ_PYKA01000122.1	Protein Homology	CDS	49460	50809	.	+	0	ID=cds-WP_000779328.1;Parent=gene-C9E97_RS19795;Dbxref=GenBank:WP_000779328.1;Name=WP_000779328.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462093.1;locus_tag=C9E97_RS19795;product=quorum sensing histidine kinase QseC;protein_id=WP_000779328.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	50916	51497	.	+	.	ID=gene-C9E97_RS19800;Name=C9E97_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19800;old_locus_tag=C9E97_20260
NZ_PYKA01000122.1	Protein Homology	CDS	50916	51497	.	+	0	ID=cds-WP_000065416.1;Parent=gene-C9E97_RS19800;Dbxref=GenBank:WP_000065416.1;Name=WP_000065416.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=C9E97_RS19800;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_000065416.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	51529	51843	.	+	.	ID=gene-C9E97_RS19805;Name=C9E97_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19805;old_locus_tag=C9E97_20265
NZ_PYKA01000122.1	Protein Homology	CDS	51529	51843	.	+	0	ID=cds-WP_000958587.1;Parent=gene-C9E97_RS19805;Dbxref=GenBank:WP_000958587.1;Name=WP_000958587.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462095.1;locus_tag=C9E97_RS19805;product=putative quinol monooxygenase;protein_id=WP_000958587.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	51968	53860	.	-	.	ID=gene-C9E97_RS19810;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=C9E97_RS19810;old_locus_tag=C9E97_20270
NZ_PYKA01000122.1	Protein Homology	CDS	51968	53860	.	-	0	ID=cds-WP_000195318.1;Parent=gene-C9E97_RS19810;Dbxref=GenBank:WP_000195318.1;Name=WP_000195318.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462096.1;locus_tag=C9E97_RS19810;product=DNA topoisomerase IV subunit B;protein_id=WP_000195318.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	53888	54469	.	-	.	ID=gene-C9E97_RS19815;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=C9E97_RS19815;old_locus_tag=C9E97_20275
NZ_PYKA01000122.1	Protein Homology	CDS	53888	54469	.	-	0	ID=cds-WP_000105725.1;Parent=gene-C9E97_RS19815;Dbxref=GenBank:WP_000105725.1;Name=WP_000105725.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462097.1;locus_tag=C9E97_RS19815;product=esterase YqiA;protein_id=WP_000105725.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	54469	55296	.	-	.	ID=gene-C9E97_RS19820;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=C9E97_RS19820;old_locus_tag=C9E97_20280
NZ_PYKA01000122.1	Protein Homology	CDS	54469	55296	.	-	0	ID=cds-WP_000444735.1;Parent=gene-C9E97_RS19820;Dbxref=GenBank:WP_000444735.1;Name=WP_000444735.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462098.1;locus_tag=C9E97_RS19820;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_000444735.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	55321	55743	.	-	.	ID=gene-C9E97_RS19825;Name=C9E97_RS19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19825;old_locus_tag=C9E97_20285
NZ_PYKA01000122.1	Protein Homology	CDS	55321	55743	.	-	0	ID=cds-WP_000833404.1;Parent=gene-C9E97_RS19825;Dbxref=GenBank:WP_000833404.1;Name=WP_000833404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462099.1;locus_tag=C9E97_RS19825;product=DUF1249 family protein;protein_id=WP_000833404.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	55740	56372	.	-	.	ID=gene-C9E97_RS19830;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=C9E97_RS19830;old_locus_tag=C9E97_20290
NZ_PYKA01000122.1	Protein Homology	CDS	55740	56372	.	-	0	ID=cds-WP_001231950.1;Parent=gene-C9E97_RS19830;Dbxref=GenBank:WP_001231950.1;Name=WP_001231950.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462100.1;locus_tag=C9E97_RS19830;product=ADP-ribose diphosphatase;protein_id=WP_001231950.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	56573	58048	.	+	.	ID=gene-C9E97_RS19835;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=C9E97_RS19835;old_locus_tag=C9E97_20295
NZ_PYKA01000122.1	Protein Homology	CDS	56573	58048	.	+	0	ID=cds-WP_072100461.1;Parent=gene-C9E97_RS19835;Dbxref=GenBank:WP_072100461.1;Name=WP_072100461.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462101.3;locus_tag=C9E97_RS19835;product=outer membrane channel protein TolC;protein_id=WP_072100461.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	58261	58932	.	+	.	ID=gene-C9E97_RS19840;Name=C9E97_RS19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19840;old_locus_tag=C9E97_20305
NZ_PYKA01000122.1	Protein Homology	CDS	58261	58932	.	+	0	ID=cds-WP_000831528.1;Parent=gene-C9E97_RS19840;Dbxref=GenBank:WP_000831528.1;Name=WP_000831528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462102.1;locus_tag=C9E97_RS19840;product=DUF1190 family protein;protein_id=WP_000831528.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	58938	60101	.	+	.	ID=gene-C9E97_RS19845;Name=C9E97_RS19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19845;old_locus_tag=C9E97_20310
NZ_PYKA01000122.1	Protein Homology	CDS	58938	60101	.	+	0	ID=cds-WP_000442833.1;Parent=gene-C9E97_RS19845;Dbxref=GenBank:WP_000442833.1;Name=WP_000442833.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462103.1;locus_tag=C9E97_RS19845;product=glutathionylspermidine synthase family protein;protein_id=WP_000442833.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	60162	60950	.	-	.	ID=gene-C9E97_RS19850;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=C9E97_RS19850;old_locus_tag=C9E97_20315
NZ_PYKA01000122.1	Protein Homology	CDS	60162	60950	.	-	0	ID=cds-WP_001520560.1;Parent=gene-C9E97_RS19850;Dbxref=GenBank:WP_001520560.1;Name=WP_001520560.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=C9E97_RS19850;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_001520560.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	61091	61864	.	+	.	ID=gene-C9E97_RS19855;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=C9E97_RS19855;old_locus_tag=C9E97_20320
NZ_PYKA01000122.1	Protein Homology	CDS	61091	61864	.	+	0	ID=cds-WP_000115874.1;Parent=gene-C9E97_RS19855;Dbxref=GenBank:WP_000115874.1;Name=WP_000115874.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462105.1;locus_tag=C9E97_RS19855;product=zinc transporter ZupT;protein_id=WP_000115874.1;transl_table=11
NZ_PYKA01000122.1	RefSeq	gene	61931	62107	.	-	.	ID=gene-C9E97_RS23950;Name=C9E97_RS23950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23950;old_locus_tag=C9E97_20325
NZ_PYKA01000122.1	Protein Homology	CDS	61931	62107	.	-	0	ID=cds-WP_000469259.1;Parent=gene-C9E97_RS23950;Dbxref=GenBank:WP_000469259.1;Name=WP_000469259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=C9E97_RS23950;product=hypothetical protein;protein_id=WP_000469259.1;transl_table=11
##sequence-region NZ_PYKA01000096.1 1 61237
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000096.1	RefSeq	region	1	61237	.	+	.	ID=NZ_PYKA01000096.1:1..61237;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000096.1	RefSeq	gene	62	448	.	+	.	ID=gene-C9E97_RS12730;Name=C9E97_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12730;old_locus_tag=C9E97_13015
NZ_PYKA01000096.1	Protein Homology	CDS	62	448	.	+	0	ID=cds-WP_000864437.1;Parent=gene-C9E97_RS12730;Dbxref=GenBank:WP_000864437.1;Name=WP_000864437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000864437.1;locus_tag=C9E97_RS12730;product=RidA family protein;protein_id=WP_000864437.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	533	1807	.	+	.	ID=gene-C9E97_RS12735;Name=C9E97_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12735;old_locus_tag=C9E97_13020
NZ_PYKA01000096.1	Protein Homology	CDS	533	1807	.	+	0	ID=cds-WP_167850413.1;Parent=gene-C9E97_RS12735;Dbxref=GenBank:WP_167850413.1;Name=WP_167850413.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295225.1;locus_tag=C9E97_RS12735;product=amino acid permease;protein_id=WP_167850413.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	1834	3015	.	+	.	ID=gene-C9E97_RS12740;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=C9E97_RS12740;old_locus_tag=C9E97_13025
NZ_PYKA01000096.1	Protein Homology	CDS	1834	3015	.	+	0	ID=cds-WP_001066156.1;Parent=gene-C9E97_RS12740;Dbxref=GenBank:WP_001066156.1;Name=WP_001066156.1;Ontology_term=GO:0009086,GO:0047804;gbkey=CDS;gene=metC;go_function=cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066156.1;locus_tag=C9E97_RS12740;product=cystathionine beta-lyase;protein_id=WP_001066156.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	3503	4432	.	-	.	ID=gene-C9E97_RS12745;Name=C9E97_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12745;old_locus_tag=C9E97_13030
NZ_PYKA01000096.1	Protein Homology	CDS	3503	4432	.	-	0	ID=cds-WP_135369576.1;Parent=gene-C9E97_RS12745;Dbxref=GenBank:WP_135369576.1;Name=WP_135369576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460636.1;locus_tag=C9E97_RS12745;product=aromatic alcohol reductase;protein_id=WP_135369576.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	4551	5456	.	+	.	ID=gene-C9E97_RS12750;Name=C9E97_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12750;old_locus_tag=C9E97_13035
NZ_PYKA01000096.1	Protein Homology	CDS	4551	5456	.	+	0	ID=cds-WP_135369575.1;Parent=gene-C9E97_RS12750;Dbxref=GenBank:WP_135369575.1;Name=WP_135369575.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460635.1;locus_tag=C9E97_RS12750;product=LysR family transcriptional regulator;protein_id=WP_135369575.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	5733	6602	.	+	.	ID=gene-C9E97_RS12755;Name=C9E97_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12755;old_locus_tag=C9E97_13040
NZ_PYKA01000096.1	Protein Homology	CDS	5733	6602	.	+	0	ID=cds-WP_000456775.1;Parent=gene-C9E97_RS12755;Dbxref=GenBank:WP_000456775.1;Name=WP_000456775.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460634.1;locus_tag=C9E97_RS12755;product=aldo/keto reductase;protein_id=WP_000456775.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	6693	7406	.	-	.	ID=gene-C9E97_RS12760;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=C9E97_RS12760;old_locus_tag=C9E97_13045
NZ_PYKA01000096.1	Protein Homology	CDS	6693	7406	.	-	0	ID=cds-WP_000979084.1;Parent=gene-C9E97_RS12760;Dbxref=GenBank:WP_000979084.1;Name=WP_000979084.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460633.1;locus_tag=C9E97_RS12760;product=SDR family oxidoreductase;protein_id=WP_000979084.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	7484	8074	.	+	.	ID=gene-C9E97_RS12765;Name=C9E97_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12765;old_locus_tag=C9E97_13050
NZ_PYKA01000096.1	Protein Homology	CDS	7484	8074	.	+	0	ID=cds-WP_000208474.1;Parent=gene-C9E97_RS12765;Dbxref=GenBank:WP_000208474.1;Name=WP_000208474.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460632.1;locus_tag=C9E97_RS12765;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000208474.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	8203	8439	.	+	.	ID=gene-C9E97_RS12770;Name=C9E97_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12770;old_locus_tag=C9E97_13055
NZ_PYKA01000096.1	Protein Homology	CDS	8203	8439	.	+	0	ID=cds-WP_001168016.1;Parent=gene-C9E97_RS12770;Dbxref=GenBank:WP_001168016.1;Name=WP_001168016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168019.1;locus_tag=C9E97_RS12770;product=YgdI/YgdR family lipoprotein;protein_id=WP_001168016.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	8653	9762	.	-	.	ID=gene-C9E97_RS12775;Name=C9E97_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12775;old_locus_tag=C9E97_13060
NZ_PYKA01000096.1	Protein Homology	CDS	8653	9762	.	-	0	ID=cds-WP_135369577.1;Parent=gene-C9E97_RS12775;Dbxref=GenBank:WP_135369577.1;Name=WP_135369577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448089.1;locus_tag=C9E97_RS12775;product=hypothetical protein;protein_id=WP_135369577.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	10154	11011	.	-	.	ID=gene-C9E97_RS12780;Name=C9E97_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12780;old_locus_tag=C9E97_13065
NZ_PYKA01000096.1	Protein Homology	CDS	10154	11011	.	-	0	ID=cds-WP_010989022.1;Parent=gene-C9E97_RS12780;Dbxref=GenBank:WP_010989022.1;Name=WP_010989022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460629.1;locus_tag=C9E97_RS12780;product=GyrI-like domain-containing protein;protein_id=WP_010989022.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	11308	12153	.	+	.	ID=gene-C9E97_RS12785;Name=zirU;gbkey=Gene;gene=zirU;gene_biotype=protein_coding;locus_tag=C9E97_RS12785;old_locus_tag=C9E97_13070
NZ_PYKA01000096.1	Protein Homology	CDS	11308	12153	.	+	0	ID=cds-WP_135420045.1;Parent=gene-C9E97_RS12785;Dbxref=GenBank:WP_135420045.1;Name=WP_135420045.1;gbkey=CDS;gene=zirU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460628.1;locus_tag=C9E97_RS12785;product=two-partner-like secretion system exoprotein ZirU;protein_id=WP_135420045.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	12228	14210	.	+	.	ID=gene-C9E97_RS12790;Name=zirT;gbkey=Gene;gene=zirT;gene_biotype=protein_coding;locus_tag=C9E97_RS12790;old_locus_tag=C9E97_13075
NZ_PYKA01000096.1	Protein Homology	CDS	12228	14210	.	+	0	ID=cds-WP_135369382.1;Parent=gene-C9E97_RS12790;Dbxref=GenBank:WP_135369382.1;Name=WP_135369382.1;gbkey=CDS;gene=zirT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460627.1;locus_tag=C9E97_RS12790;product=two-partner secretion translocator ZirT;protein_id=WP_135369382.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	14237	15067	.	+	.	ID=gene-C9E97_RS12795;Name=C9E97_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12795;old_locus_tag=C9E97_13080
NZ_PYKA01000096.1	Protein Homology	CDS	14237	15067	.	+	0	ID=cds-WP_031605286.1;Parent=gene-C9E97_RS12795;Dbxref=GenBank:WP_031605286.1;Name=WP_031605286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531580.1;locus_tag=C9E97_RS12795;product=ZirS family two-partner secretion-like system exoprotein;protein_id=WP_031605286.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	15070	15588	.	+	.	ID=gene-C9E97_RS12800;Name=C9E97_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12800;old_locus_tag=C9E97_13085
NZ_PYKA01000096.1	Protein Homology	CDS	15070	15588	.	+	0	ID=cds-WP_135369381.1;Parent=gene-C9E97_RS12800;Dbxref=GenBank:WP_135369381.1;Name=WP_135369381.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530156.1;locus_tag=C9E97_RS12800;product=redoxin family protein;protein_id=WP_135369381.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	15695	16033	.	-	.	ID=gene-C9E97_RS12805;Name=C9E97_RS12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12805;old_locus_tag=C9E97_13090
NZ_PYKA01000096.1	Protein Homology	CDS	15695	16033	.	-	0	ID=cds-WP_000051812.1;Parent=gene-C9E97_RS12805;Dbxref=GenBank:WP_000051812.1;Name=WP_000051812.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051808.1;locus_tag=C9E97_RS12805;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_000051812.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	16061	16747	.	-	.	ID=gene-C9E97_RS12810;Name=C9E97_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12810;old_locus_tag=C9E97_13095
NZ_PYKA01000096.1	Protein Homology	CDS	16061	16747	.	-	0	ID=cds-WP_000097247.1;Parent=gene-C9E97_RS12810;Dbxref=GenBank:WP_000097247.1;Name=WP_000097247.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460624.1;locus_tag=C9E97_RS12810;product=B3/B4 domain-containing protein;protein_id=WP_000097247.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	16791	17393	.	+	.	ID=gene-C9E97_RS12815;Name=C9E97_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12815;old_locus_tag=C9E97_13100
NZ_PYKA01000096.1	Protein Homology	CDS	16791	17393	.	+	0	ID=cds-WP_000163371.1;Parent=gene-C9E97_RS12815;Dbxref=GenBank:WP_000163371.1;Name=WP_000163371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460623.1;locus_tag=C9E97_RS12815;product=helix-turn-helix domain-containing protein;protein_id=WP_000163371.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	17475	18506	.	-	.	ID=gene-C9E97_RS12820;Name=C9E97_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12820;old_locus_tag=C9E97_13105
NZ_PYKA01000096.1	Protein Homology	CDS	17475	18506	.	-	0	ID=cds-WP_000493672.1;Parent=gene-C9E97_RS12820;Dbxref=GenBank:WP_000493672.1;Name=WP_000493672.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460622.1;locus_tag=C9E97_RS12820;product=mechanosensitive ion channel family protein;protein_id=WP_000493672.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	18745	18999	.	+	.	ID=gene-C9E97_RS12825;Name=C9E97_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12825;old_locus_tag=C9E97_13110
NZ_PYKA01000096.1	Protein Homology	CDS	18745	18999	.	+	0	ID=cds-WP_000605645.1;Parent=gene-C9E97_RS12825;Dbxref=GenBank:WP_000605645.1;Name=WP_000605645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460621.1;locus_tag=C9E97_RS12825;product=DUF2534 family protein;protein_id=WP_000605645.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	19054	20001	.	-	.	ID=gene-C9E97_RS12830;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=C9E97_RS12830;old_locus_tag=C9E97_13115
NZ_PYKA01000096.1	Protein Homology	CDS	19054	20001	.	-	0	ID=cds-WP_001262138.1;Parent=gene-C9E97_RS12830;Dbxref=GenBank:WP_001262138.1;Name=WP_001262138.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460620.1;locus_tag=C9E97_RS12830;product=universal stress protein UspE;protein_id=WP_001262138.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	20152	20904	.	-	.	ID=gene-C9E97_RS12835;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=C9E97_RS12835;old_locus_tag=C9E97_13120
NZ_PYKA01000096.1	Protein Homology	CDS	20152	20904	.	-	0	ID=cds-WP_000611914.1;Parent=gene-C9E97_RS12835;Dbxref=GenBank:WP_000611914.1;Name=WP_000611914.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=C9E97_RS12835;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000611914.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	21100	21615	.	-	.	ID=gene-C9E97_RS12840;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=C9E97_RS12840;old_locus_tag=C9E97_13125
NZ_PYKA01000096.1	Protein Homology	CDS	21100	21615	.	-	0	ID=cds-WP_000945037.1;Parent=gene-C9E97_RS12840;Dbxref=GenBank:WP_000945037.1;Name=WP_000945037.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460618.1;locus_tag=C9E97_RS12840;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000945037.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	21873	22436	.	+	.	ID=gene-C9E97_RS12845;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=C9E97_RS12845;old_locus_tag=C9E97_13130
NZ_PYKA01000096.1	Protein Homology	CDS	21873	22436	.	+	0	ID=cds-WP_001046799.1;Parent=gene-C9E97_RS12845;Dbxref=GenBank:WP_001046799.1;Name=WP_001046799.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460617.1;locus_tag=C9E97_RS12845;product=DNA endonuclease SmrA;protein_id=WP_001046799.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	22829	23983	.	+	.	ID=gene-C9E97_RS12850;Name=C9E97_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12850;old_locus_tag=C9E97_13135
NZ_PYKA01000096.1	Protein Homology	CDS	22829	23983	.	+	0	ID=cds-WP_135369380.1;Parent=gene-C9E97_RS12850;Dbxref=GenBank:WP_135369380.1;Name=WP_135369380.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210139.1;locus_tag=C9E97_RS12850;product=methyl-accepting chemotaxis protein;protein_id=WP_135369380.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	24129	25112	.	+	.	ID=gene-C9E97_RS12855;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=C9E97_RS12855;old_locus_tag=C9E97_13140
NZ_PYKA01000096.1	Protein Homology	CDS	24129	25112	.	+	0	ID=cds-WP_000387373.1;Parent=gene-C9E97_RS12855;Dbxref=GenBank:WP_000387373.1;Name=WP_000387373.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460615.1;locus_tag=C9E97_RS12855;product=zinc transporter ZntB;protein_id=WP_000387373.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	25388	25570	.	+	.	ID=gene-C9E97_RS24060;Name=C9E97_RS24060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS24060;old_locus_tag=C9E97_13145
NZ_PYKA01000096.1	Protein Homology	CDS	25388	25570	.	+	0	ID=cds-WP_001750081.1;Parent=gene-C9E97_RS24060;Dbxref=GenBank:WP_001750081.1;Name=WP_001750081.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048180.1;locus_tag=C9E97_RS24060;product=hypothetical protein;protein_id=WP_001750081.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	25599	26972	.	+	.	ID=gene-C9E97_RS12865;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=C9E97_RS12865;old_locus_tag=C9E97_13150
NZ_PYKA01000096.1	Protein Homology	CDS	25599	26972	.	+	0	ID=cds-WP_000123688.1;Parent=gene-C9E97_RS12865;Dbxref=GenBank:WP_000123688.1;Name=WP_000123688.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=C9E97_RS12865;product=ATP-dependent RNA helicase DbpA;protein_id=WP_000123688.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	27016	27951	.	-	.	ID=gene-C9E97_RS12870;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=C9E97_RS12870;old_locus_tag=C9E97_13155
NZ_PYKA01000096.1	Protein Homology	CDS	27016	27951	.	-	0	ID=cds-WP_135369379.1;Parent=gene-C9E97_RS12870;Dbxref=GenBank:WP_135369379.1;Name=WP_135369379.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460613.1;locus_tag=C9E97_RS12870;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_135369379.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	pseudogene	28057	28209	.	-	.	ID=gene-C9E97_RS12875;Name=C9E97_RS12875;end_range=28209,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS12875;old_locus_tag=C9E97_13160;partial=true;pseudo=true
NZ_PYKA01000096.1	Protein Homology	CDS	28057	28209	.	-	0	ID=cds-C9E97_RS12875;Parent=gene-C9E97_RS12875;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=28209,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=C9E97_RS12875;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	28638	32060	.	+	.	ID=gene-C9E97_RS12880;Name=C9E97_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12880;old_locus_tag=C9E97_13165
NZ_PYKA01000096.1	Protein Homology	CDS	28638	32060	.	+	0	ID=cds-WP_135420043.1;Parent=gene-C9E97_RS12880;Dbxref=GenBank:WP_135420043.1;Name=WP_135420043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835222.1;locus_tag=C9E97_RS12880;product=DUF4765 family protein;protein_id=WP_135420043.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	32334	32672	.	+	.	ID=gene-C9E97_RS12885;Name=C9E97_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12885;old_locus_tag=C9E97_13170
NZ_PYKA01000096.1	Protein Homology	CDS	32334	32672	.	+	0	ID=cds-WP_000159242.1;Parent=gene-C9E97_RS12885;Dbxref=GenBank:WP_000159242.1;Name=WP_000159242.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460612.1;locus_tag=C9E97_RS12885;product=SMR family transporter;protein_id=WP_000159242.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	32722	33156	.	-	.	ID=gene-C9E97_RS12890;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=C9E97_RS12890;old_locus_tag=C9E97_13175
NZ_PYKA01000096.1	Protein Homology	CDS	32722	33156	.	-	0	ID=cds-WP_001082296.1;Parent=gene-C9E97_RS12890;Dbxref=GenBank:WP_001082296.1;Name=WP_001082296.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460611.1;locus_tag=C9E97_RS12890;product=universal stress protein UspF;protein_id=WP_001082296.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	33638	37162	.	-	.	ID=gene-C9E97_RS12895;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=C9E97_RS12895;old_locus_tag=C9E97_13185
NZ_PYKA01000096.1	Protein Homology	CDS	33638	37162	.	-	0	ID=cds-WP_135420041.1;Parent=gene-C9E97_RS12895;Dbxref=GenBank:WP_135420041.1;Name=WP_135420041.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460610.1;locus_tag=C9E97_RS12895;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_135420041.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	37223	37522	.	-	.	ID=gene-C9E97_RS12900;Name=C9E97_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12900;old_locus_tag=C9E97_13190
NZ_PYKA01000096.1	Protein Homology	CDS	37223	37522	.	-	0	ID=cds-WP_031607555.1;Parent=gene-C9E97_RS12900;Dbxref=GenBank:WP_031607555.1;Name=WP_031607555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460609.1;locus_tag=C9E97_RS12900;product=hypothetical protein;protein_id=WP_031607555.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	37438	37704	.	+	.	ID=gene-C9E97_RS12905;Name=C9E97_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12905;old_locus_tag=C9E97_13195
NZ_PYKA01000096.1	Protein Homology	CDS	37438	37704	.	+	0	ID=cds-WP_001200679.1;Parent=gene-C9E97_RS12905;Dbxref=GenBank:WP_001200679.1;Name=WP_001200679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=C9E97_RS12905;product=putative hemolysin;protein_id=WP_001200679.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	37748	38158	.	-	.	ID=gene-C9E97_RS12910;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=C9E97_RS12910;old_locus_tag=C9E97_13200
NZ_PYKA01000096.1	Protein Homology	CDS	37748	38158	.	-	0	ID=cds-WP_000725242.1;Parent=gene-C9E97_RS12910;Dbxref=GenBank:WP_000725242.1;Name=WP_000725242.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460607.1;locus_tag=C9E97_RS12910;product=heat shock protein HslJ;protein_id=WP_000725242.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	38269	39258	.	-	.	ID=gene-C9E97_RS12915;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=C9E97_RS12915;old_locus_tag=C9E97_13205
NZ_PYKA01000096.1	Protein Homology	CDS	38269	39258	.	-	0	ID=cds-WP_000762206.1;Parent=gene-C9E97_RS12915;Dbxref=GenBank:WP_000762206.1;Name=WP_000762206.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460606.1;locus_tag=C9E97_RS12915;product=D-lactate dehydrogenase;protein_id=WP_000762206.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	39498	42134	.	+	.	ID=gene-C9E97_RS12920;Name=C9E97_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12920;old_locus_tag=C9E97_13210
NZ_PYKA01000096.1	Protein Homology	CDS	39498	42134	.	+	0	ID=cds-WP_135369746.1;Parent=gene-C9E97_RS12920;Dbxref=GenBank:WP_135369746.1;Name=WP_135369746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460605.1;locus_tag=C9E97_RS12920;product=YdbH family protein;protein_id=WP_135369746.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	42134	42325	.	+	.	ID=gene-C9E97_RS12925;Name=C9E97_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12925;old_locus_tag=C9E97_13215
NZ_PYKA01000096.1	Protein Homology	CDS	42134	42325	.	+	0	ID=cds-WP_000784063.1;Parent=gene-C9E97_RS12925;Dbxref=GenBank:WP_000784063.1;Name=WP_000784063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460604.1;locus_tag=C9E97_RS12925;product=YnbE family lipoprotein;protein_id=WP_000784063.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	42333	42656	.	+	.	ID=gene-C9E97_RS12930;Name=C9E97_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12930;old_locus_tag=C9E97_13220
NZ_PYKA01000096.1	Protein Homology	CDS	42333	42656	.	+	0	ID=cds-WP_050067624.1;Parent=gene-C9E97_RS12930;Dbxref=GenBank:WP_050067624.1;Name=WP_050067624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460603.1;locus_tag=C9E97_RS12930;product=YdbL family protein;protein_id=WP_050067624.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	42801	43397	.	+	.	ID=gene-C9E97_RS12935;Name=C9E97_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12935;old_locus_tag=C9E97_13225
NZ_PYKA01000096.1	Protein Homology	CDS	42801	43397	.	+	0	ID=cds-WP_135369747.1;Parent=gene-C9E97_RS12935;Dbxref=GenBank:WP_135369747.1;Name=WP_135369747.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000177492.1;locus_tag=C9E97_RS12935;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_135369747.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	43394	44311	.	+	.	ID=gene-C9E97_RS12940;Name=C9E97_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12940;old_locus_tag=C9E97_13230
NZ_PYKA01000096.1	Protein Homology	CDS	43394	44311	.	+	0	ID=cds-WP_135369748.1;Parent=gene-C9E97_RS12940;Dbxref=GenBank:WP_135369748.1;Name=WP_135369748.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156609.1;locus_tag=C9E97_RS12940;product=phosphatidate cytidylyltransferase;protein_id=WP_135369748.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	44318	44974	.	+	.	ID=gene-C9E97_RS12945;Name=C9E97_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12945;old_locus_tag=C9E97_13235
NZ_PYKA01000096.1	Protein Homology	CDS	44318	44974	.	+	0	ID=cds-WP_135369749.1;Parent=gene-C9E97_RS12945;Dbxref=GenBank:WP_135369749.1;Name=WP_135369749.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015702890.1;locus_tag=C9E97_RS12945;product=lysophospholipid acyltransferase family protein;protein_id=WP_135369749.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	44949	46709	.	+	.	ID=gene-C9E97_RS12950;Name=C9E97_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12950;old_locus_tag=C9E97_13240
NZ_PYKA01000096.1	Protein Homology	CDS	44949	46709	.	+	0	ID=cds-WP_135369750.1;Parent=gene-C9E97_RS12950;Dbxref=GenBank:WP_135369750.1;Name=WP_135369750.1;Ontology_term=GO:0008168,GO:0016787,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,hydrolase activity|0016787||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008812691.1;locus_tag=C9E97_RS12950;product=bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase;protein_id=WP_135369750.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	46699	48009	.	+	.	ID=gene-C9E97_RS12955;Name=C9E97_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12955;old_locus_tag=C9E97_13245
NZ_PYKA01000096.1	Protein Homology	CDS	46699	48009	.	+	0	ID=cds-WP_023137904.1;Parent=gene-C9E97_RS12955;Dbxref=GenBank:WP_023137904.1;Name=WP_023137904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835230.1;locus_tag=C9E97_RS12955;product=phosphatase PAP2/dual specificity phosphatase family protein;protein_id=WP_023137904.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	48117	48404	.	+	.	ID=gene-C9E97_RS12960;Name=C9E97_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12960;old_locus_tag=C9E97_13250
NZ_PYKA01000096.1	Protein Homology	CDS	48117	48404	.	+	0	ID=cds-WP_010835231.1;Parent=gene-C9E97_RS12960;Dbxref=GenBank:WP_010835231.1;Name=WP_010835231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835231.1;locus_tag=C9E97_RS12960;product=hypothetical protein;protein_id=WP_010835231.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	48463	49068	.	-	.	ID=gene-C9E97_RS12965;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=C9E97_RS12965;old_locus_tag=C9E97_13255
NZ_PYKA01000096.1	Protein Homology	CDS	48463	49068	.	-	0	ID=cds-WP_000048924.1;Parent=gene-C9E97_RS12965;Dbxref=GenBank:WP_000048924.1;Name=WP_000048924.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460601.1;locus_tag=C9E97_RS12965;product=FMN-dependent NADH-azoreductase;protein_id=WP_000048924.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	49269	53171	.	+	.	ID=gene-C9E97_RS12970;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=C9E97_RS12970;old_locus_tag=C9E97_13260
NZ_PYKA01000096.1	Protein Homology	CDS	49269	53171	.	+	0	ID=cds-WP_135369751.1;Parent=gene-C9E97_RS12970;Dbxref=GenBank:WP_135369751.1;Name=WP_135369751.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=C9E97_RS12970;product=ATP-dependent RNA helicase HrpA;protein_id=WP_135369751.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	53235	54035	.	+	.	ID=gene-C9E97_RS12975;Name=C9E97_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12975;old_locus_tag=C9E97_13265
NZ_PYKA01000096.1	Protein Homology	CDS	53235	54035	.	+	0	ID=cds-WP_023242334.1;Parent=gene-C9E97_RS12975;Dbxref=GenBank:WP_023242334.1;Name=WP_023242334.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460599.1;locus_tag=C9E97_RS12975;product=YdcF family protein;protein_id=WP_023242334.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	54152	54682	.	+	.	ID=gene-C9E97_RS12980;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=C9E97_RS12980;old_locus_tag=C9E97_13270
NZ_PYKA01000096.1	Protein Homology	CDS	54152	54682	.	+	0	ID=cds-WP_000527277.1;Parent=gene-C9E97_RS12980;Dbxref=GenBank:WP_000527277.1;Name=WP_000527277.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460598.1;locus_tag=C9E97_RS12980;product=cytochrome b561;protein_id=WP_000527277.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	54953	55615	.	-	.	ID=gene-C9E97_RS12985;Name=C9E97_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12985;old_locus_tag=C9E97_13275
NZ_PYKA01000096.1	Protein Homology	CDS	54953	55615	.	-	0	ID=cds-WP_001520112.1;Parent=gene-C9E97_RS12985;Dbxref=GenBank:WP_001520112.1;Name=WP_001520112.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551832.1;locus_tag=C9E97_RS12985;product=class I SAM-dependent methyltransferase;protein_id=WP_001520112.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	56079	57629	.	-	.	ID=gene-C9E97_RS12990;Name=C9E97_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12990;old_locus_tag=C9E97_13280
NZ_PYKA01000096.1	Protein Homology	CDS	56079	57629	.	-	0	ID=cds-WP_135369475.1;Parent=gene-C9E97_RS12990;Dbxref=GenBank:WP_135369475.1;Name=WP_135369475.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460596.1;locus_tag=C9E97_RS12990;product=glycosyltransferase family 39 protein;protein_id=WP_135369475.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	57766	58446	.	-	.	ID=gene-C9E97_RS12995;Name=C9E97_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12995;old_locus_tag=C9E97_13285
NZ_PYKA01000096.1	Protein Homology	CDS	57766	58446	.	-	0	ID=cds-WP_000560165.1;Parent=gene-C9E97_RS12995;Dbxref=GenBank:WP_000560165.1;Name=WP_000560165.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460595.1;locus_tag=C9E97_RS12995;product=amino acid ABC transporter permease;protein_id=WP_000560165.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	58443	59174	.	-	.	ID=gene-C9E97_RS13000;Name=C9E97_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13000;old_locus_tag=C9E97_13290
NZ_PYKA01000096.1	Protein Homology	CDS	58443	59174	.	-	0	ID=cds-WP_023194418.1;Parent=gene-C9E97_RS13000;Dbxref=GenBank:WP_023194418.1;Name=WP_023194418.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460594.1;locus_tag=C9E97_RS13000;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_023194418.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	59199	59846	.	-	.	ID=gene-C9E97_RS13005;Name=C9E97_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13005;old_locus_tag=C9E97_13295
NZ_PYKA01000096.1	Protein Homology	CDS	59199	59846	.	-	0	ID=cds-WP_045341191.1;Parent=gene-C9E97_RS13005;Dbxref=GenBank:WP_045341191.1;Name=WP_045341191.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460593.1;locus_tag=C9E97_RS13005;product=amino acid ABC transporter permease;protein_id=WP_045341191.1;transl_table=11
NZ_PYKA01000096.1	RefSeq	gene	59853	60614	.	-	.	ID=gene-C9E97_RS13010;Name=C9E97_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13010;old_locus_tag=C9E97_13300
NZ_PYKA01000096.1	Protein Homology	CDS	59853	60614	.	-	0	ID=cds-WP_135369474.1;Parent=gene-C9E97_RS13010;Dbxref=GenBank:WP_135369474.1;Name=WP_135369474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460592.1;locus_tag=C9E97_RS13010;product=transporter substrate-binding domain-containing protein;protein_id=WP_135369474.1;transl_table=11
##sequence-region NZ_PYKA01000053.1 1 60222
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000053.1	RefSeq	region	1	60222	.	+	.	ID=NZ_PYKA01000053.1:1..60222;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000053.1	RefSeq	gene	305	649	.	+	.	ID=gene-C9E97_RS07170;Name=C9E97_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07170;old_locus_tag=C9E97_07345
NZ_PYKA01000053.1	Protein Homology	CDS	305	649	.	+	0	ID=cds-WP_135369473.1;Parent=gene-C9E97_RS07170;Dbxref=GenBank:WP_135369473.1;Name=WP_135369473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460591.1;locus_tag=C9E97_RS07170;product=DUF1294 domain-containing protein;protein_id=WP_135369473.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	770	1996	.	-	.	ID=gene-C9E97_RS07175;Name=sseJ;gbkey=Gene;gene=sseJ;gene_biotype=protein_coding;locus_tag=C9E97_RS07175;old_locus_tag=C9E97_07350
NZ_PYKA01000053.1	Protein Homology	CDS	770	1996	.	-	0	ID=cds-WP_001131430.1;Parent=gene-C9E97_RS07175;Dbxref=GenBank:WP_001131430.1;Name=WP_001131430.1;gbkey=CDS;gene=sseJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460590.1;locus_tag=C9E97_RS07175;product=SPI-2 type III secretion system effector SseJ;protein_id=WP_001131430.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	2422	3138	.	+	.	ID=gene-C9E97_RS07180;Name=C9E97_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07180;old_locus_tag=C9E97_07355
NZ_PYKA01000053.1	Protein Homology	CDS	2422	3138	.	+	0	ID=cds-WP_000997196.1;Parent=gene-C9E97_RS07180;Dbxref=GenBank:WP_000997196.1;Name=WP_000997196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460589.1;locus_tag=C9E97_RS07180;product=membrane protein;protein_id=WP_000997196.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	3267	3668	.	-	.	ID=gene-C9E97_RS07185;Name=steB;gbkey=Gene;gene=steB;gene_biotype=protein_coding;locus_tag=C9E97_RS07185;old_locus_tag=C9E97_07360
NZ_PYKA01000053.1	Protein Homology	CDS	3267	3668	.	-	0	ID=cds-WP_077918060.1;Parent=gene-C9E97_RS07185;Dbxref=GenBank:WP_077918060.1;Name=WP_077918060.1;gbkey=CDS;gene=steB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448047.1;locus_tag=C9E97_RS07185;product=type III secretion system effector SteB;protein_id=WP_077918060.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	4186	4461	.	+	.	ID=gene-C9E97_RS07190;Name=C9E97_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07190;old_locus_tag=C9E97_07365
NZ_PYKA01000053.1	Protein Homology	CDS	4186	4461	.	+	0	ID=cds-WP_135369479.1;Parent=gene-C9E97_RS07190;Dbxref=GenBank:WP_135369479.1;Name=WP_135369479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=C9E97_RS07190;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_135369479.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	4493	5611	.	+	.	ID=gene-C9E97_RS07195;Name=C9E97_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07195;old_locus_tag=C9E97_07370
NZ_PYKA01000053.1	Protein Homology	CDS	4493	5611	.	+	0	ID=cds-WP_000842135.1;Parent=gene-C9E97_RS07195;Dbxref=GenBank:WP_000842135.1;Name=WP_000842135.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=C9E97_RS07195;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_000842135.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	5780	7405	.	+	.	ID=gene-C9E97_RS07205;Name=C9E97_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07205;old_locus_tag=C9E97_07380
NZ_PYKA01000053.1	Protein Homology	CDS	5780	7405	.	+	0	ID=cds-WP_000528481.1;Parent=gene-C9E97_RS07205;Dbxref=GenBank:WP_000528481.1;Name=WP_000528481.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=C9E97_RS07205;product=methyl-accepting chemotaxis protein;protein_id=WP_000528481.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	7466	8389	.	-	.	ID=gene-C9E97_RS07210;Name=C9E97_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07210;old_locus_tag=C9E97_07385
NZ_PYKA01000053.1	Protein Homology	CDS	7466	8389	.	-	0	ID=cds-WP_000414259.1;Parent=gene-C9E97_RS07210;Dbxref=GenBank:WP_000414259.1;Name=WP_000414259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460584.1;locus_tag=C9E97_RS07210;product=LysR substrate-binding domain-containing protein;protein_id=WP_000414259.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	8682	10025	.	+	.	ID=gene-C9E97_RS07215;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=C9E97_RS07215;old_locus_tag=C9E97_07390
NZ_PYKA01000053.1	Protein Homology	CDS	8682	10025	.	+	0	ID=cds-WP_000024092.1;Parent=gene-C9E97_RS07215;Dbxref=GenBank:WP_000024092.1;Name=WP_000024092.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=C9E97_RS07215;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=WP_000024092.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	10074	11582	.	+	.	ID=gene-C9E97_RS07220;Name=C9E97_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07220;old_locus_tag=C9E97_07395
NZ_PYKA01000053.1	Protein Homology	CDS	10074	11582	.	+	0	ID=cds-WP_135369480.1;Parent=gene-C9E97_RS07220;Dbxref=GenBank:WP_135369480.1;Name=WP_135369480.1;Ontology_term=GO:0016298,GO:0052689;gbkey=CDS;go_function=lipase activity|0016298||IEA,carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460582.1;locus_tag=C9E97_RS07220;product=carboxylesterase/lipase family protein;protein_id=WP_135369480.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	11802	13457	.	+	.	ID=gene-C9E97_RS07225;Name=C9E97_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07225;old_locus_tag=C9E97_07400
NZ_PYKA01000053.1	Protein Homology	CDS	11802	13457	.	+	0	ID=cds-WP_135369481.1;Parent=gene-C9E97_RS07225;Dbxref=GenBank:WP_135369481.1;Name=WP_135369481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460581.1;locus_tag=C9E97_RS07225;product=glucan biosynthesis protein D;protein_id=WP_135369481.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	13653	14228	.	+	.	ID=gene-C9E97_RS07230;Name=C9E97_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07230;old_locus_tag=C9E97_07405
NZ_PYKA01000053.1	Protein Homology	CDS	13653	14228	.	+	0	ID=cds-WP_135369482.1;Parent=gene-C9E97_RS07230;Dbxref=GenBank:WP_135369482.1;Name=WP_135369482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460580.1;locus_tag=C9E97_RS07230;product=YceI family protein;protein_id=WP_135369482.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	14240	15442	.	+	.	ID=gene-C9E97_RS07235;Name=C9E97_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07235;old_locus_tag=C9E97_07410
NZ_PYKA01000053.1	Protein Homology	CDS	14240	15442	.	+	0	ID=cds-WP_135369487.1;Parent=gene-C9E97_RS07235;Dbxref=GenBank:WP_135369487.1;Name=WP_135369487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460579.1;locus_tag=C9E97_RS07235;product=lactate oxidase;protein_id=WP_135369487.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	15489	15926	.	-	.	ID=gene-C9E97_RS07240;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=C9E97_RS07240;old_locus_tag=C9E97_07415
NZ_PYKA01000053.1	Protein Homology	CDS	15489	15926	.	-	0	ID=cds-WP_135369483.1;Parent=gene-C9E97_RS07240;Dbxref=GenBank:WP_135369483.1;Name=WP_135369483.1;gbkey=CDS;gene=aac(6');inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=C9E97_RS07240;product=cryptic aminoglycoside N-acetyltransferase AAC(6')-Iy/Iaa;protein_id=WP_135369483.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	15926	16717	.	-	.	ID=gene-C9E97_RS07245;Name=C9E97_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07245;old_locus_tag=C9E97_07420
NZ_PYKA01000053.1	Protein Homology	CDS	15926	16717	.	-	0	ID=cds-WP_001670738.1;Parent=gene-C9E97_RS07245;Dbxref=GenBank:WP_001670738.1;Name=WP_001670738.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460577.1;locus_tag=C9E97_RS07245;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001670738.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	16733	17365	.	-	.	ID=gene-C9E97_RS07250;Name=C9E97_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07250;old_locus_tag=C9E97_07425
NZ_PYKA01000053.1	Protein Homology	CDS	16733	17365	.	-	0	ID=cds-WP_135369484.1;Parent=gene-C9E97_RS07250;Dbxref=GenBank:WP_135369484.1;Name=WP_135369484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460576.1;locus_tag=C9E97_RS07250;product=ribulose-phosphate 3 epimerase family protein;protein_id=WP_135369484.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	17377	17814	.	-	.	ID=gene-C9E97_RS07255;Name=sgcA;gbkey=Gene;gene=sgcA;gene_biotype=protein_coding;locus_tag=C9E97_RS07255;old_locus_tag=C9E97_07430
NZ_PYKA01000053.1	Protein Homology	CDS	17377	17814	.	-	0	ID=cds-WP_000606458.1;Parent=gene-C9E97_RS07255;Dbxref=GenBank:WP_000606458.1;Name=WP_000606458.1;gbkey=CDS;gene=sgcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460575.1;locus_tag=C9E97_RS07255;product=SgcA family PTS sugar transporter subunit IIA;protein_id=WP_000606458.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	17946	18752	.	-	.	ID=gene-C9E97_RS07260;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=C9E97_RS07260;old_locus_tag=C9E97_07435
NZ_PYKA01000053.1	Protein Homology	CDS	17946	18752	.	-	0	ID=cds-WP_031605312.1;Parent=gene-C9E97_RS07260;Dbxref=GenBank:WP_031605312.1;Name=WP_031605312.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460574.1;locus_tag=C9E97_RS07260;product=BtpA family protein SgcQ;protein_id=WP_031605312.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	18766	20079	.	-	.	ID=gene-C9E97_RS07265;Name=sgcC;gbkey=Gene;gene=sgcC;gene_biotype=protein_coding;locus_tag=C9E97_RS07265;old_locus_tag=C9E97_07440
NZ_PYKA01000053.1	Protein Homology	CDS	18766	20079	.	-	0	ID=cds-WP_045717713.1;Parent=gene-C9E97_RS07265;Dbxref=GenBank:WP_045717713.1;Name=WP_045717713.1;gbkey=CDS;gene=sgcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460573.1;locus_tag=C9E97_RS07265;product=PTS sugar transporter subunit IIC SgcC;protein_id=WP_045717713.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	20090	20371	.	-	.	ID=gene-C9E97_RS07270;Name=sgcB;gbkey=Gene;gene=sgcB;gene_biotype=protein_coding;locus_tag=C9E97_RS07270;old_locus_tag=C9E97_07445
NZ_PYKA01000053.1	Protein Homology	CDS	20090	20371	.	-	0	ID=cds-WP_000976132.1;Parent=gene-C9E97_RS07270;Dbxref=GenBank:WP_000976132.1;Name=WP_000976132.1;gbkey=CDS;gene=sgcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460572.1;locus_tag=C9E97_RS07270;product=PTS sugar transporter subunit IIB SgcB;protein_id=WP_000976132.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	20368	21486	.	-	.	ID=gene-C9E97_RS07275;Name=C9E97_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07275;old_locus_tag=C9E97_07450
NZ_PYKA01000053.1	Protein Homology	CDS	20368	21486	.	-	0	ID=cds-WP_000144629.1;Parent=gene-C9E97_RS07275;Dbxref=GenBank:WP_000144629.1;Name=WP_000144629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460571.1;locus_tag=C9E97_RS07275;product=M42 family metallopeptidase;protein_id=WP_000144629.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	21703	22242	.	+	.	ID=gene-C9E97_RS07280;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=C9E97_RS07280;old_locus_tag=C9E97_07455
NZ_PYKA01000053.1	Protein Homology	CDS	21703	22242	.	+	0	ID=cds-WP_000229311.1;Parent=gene-C9E97_RS07280;Dbxref=GenBank:WP_000229311.1;Name=WP_000229311.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460570.1;locus_tag=C9E97_RS07280;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_000229311.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	22239	23219	.	-	.	ID=gene-C9E97_RS07285;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=C9E97_RS07285;old_locus_tag=C9E97_07460
NZ_PYKA01000053.1	Protein Homology	CDS	22239	23219	.	-	0	ID=cds-WP_079840361.1;Parent=gene-C9E97_RS07285;Dbxref=GenBank:WP_079840361.1;Name=WP_079840361.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460569.1;locus_tag=C9E97_RS07285;product=YdcK family protein;protein_id=WP_079840361.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	23326	24339	.	+	.	ID=gene-C9E97_RS07290;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=C9E97_RS07290;old_locus_tag=C9E97_07465
NZ_PYKA01000053.1	Protein Homology	CDS	23326	24339	.	+	0	ID=cds-WP_061378143.1;Parent=gene-C9E97_RS07290;Dbxref=GenBank:WP_061378143.1;Name=WP_061378143.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460568.1;locus_tag=C9E97_RS07290;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_061378143.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	24326	24922	.	+	.	ID=gene-C9E97_RS07295;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=C9E97_RS07295;old_locus_tag=C9E97_07470
NZ_PYKA01000053.1	Protein Homology	CDS	24326	24922	.	+	0	ID=cds-WP_000218276.1;Parent=gene-C9E97_RS07295;Dbxref=GenBank:WP_000218276.1;Name=WP_000218276.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460567.1;locus_tag=C9E97_RS07295;product=tellurite resistance methyltransferase TehB;protein_id=WP_000218276.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	25078	25746	.	+	.	ID=gene-C9E97_RS07300;Name=C9E97_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07300;old_locus_tag=C9E97_07475
NZ_PYKA01000053.1	Protein Homology	CDS	25078	25746	.	+	0	ID=cds-WP_001259025.1;Parent=gene-C9E97_RS07300;Dbxref=GenBank:WP_001259025.1;Name=WP_001259025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460566.1;locus_tag=C9E97_RS07300;product=DUF3313 domain-containing protein;protein_id=WP_001259025.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	25800	26978	.	-	.	ID=gene-C9E97_RS07305;Name=C9E97_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07305;old_locus_tag=C9E97_07480
NZ_PYKA01000053.1	Protein Homology	CDS	25800	26978	.	-	0	ID=cds-WP_135369485.1;Parent=gene-C9E97_RS07305;Dbxref=GenBank:WP_135369485.1;Name=WP_135369485.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460565.1;locus_tag=C9E97_RS07305;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_135369485.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	27071	27607	.	+	.	ID=gene-C9E97_RS07310;Name=C9E97_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07310;old_locus_tag=C9E97_07485
NZ_PYKA01000053.1	Protein Homology	CDS	27071	27607	.	+	0	ID=cds-WP_135369486.1;Parent=gene-C9E97_RS07310;Dbxref=GenBank:WP_135369486.1;Name=WP_135369486.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460564.1;locus_tag=C9E97_RS07310;product=helix-turn-helix domain-containing protein;protein_id=WP_135369486.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	27686	29650	.	+	.	ID=gene-C9E97_RS07315;Name=C9E97_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07315;old_locus_tag=C9E97_07490
NZ_PYKA01000053.1	Protein Homology	CDS	27686	29650	.	+	0	ID=cds-WP_031605316.1;Parent=gene-C9E97_RS07315;Dbxref=GenBank:WP_031605316.1;Name=WP_031605316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460563.1;locus_tag=C9E97_RS07315;product=peptidase U32 family protein;protein_id=WP_031605316.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	29651	29881	.	-	.	ID=gene-C9E97_RS07320;Name=C9E97_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07320;old_locus_tag=C9E97_07495
NZ_PYKA01000053.1	Protein Homology	CDS	29651	29881	.	-	0	ID=cds-WP_000956438.1;Parent=gene-C9E97_RS07320;Dbxref=GenBank:WP_000956438.1;Name=WP_000956438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460562.1;locus_tag=C9E97_RS07320;product=DUF2554 family protein;protein_id=WP_000956438.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	30154	31104	.	-	.	ID=gene-C9E97_RS07325;Name=sifB;gbkey=Gene;gene=sifB;gene_biotype=protein_coding;locus_tag=C9E97_RS07325;old_locus_tag=C9E97_07500
NZ_PYKA01000053.1	Protein Homology	CDS	30154	31104	.	-	0	ID=cds-WP_135369778.1;Parent=gene-C9E97_RS07325;Dbxref=GenBank:WP_135369778.1;Name=WP_135369778.1;gbkey=CDS;gene=sifB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460561.1;locus_tag=C9E97_RS07325;product=SPI-2 type III secretion system effector SifB;protein_id=WP_135369778.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	31619	32017	.	+	.	ID=gene-C9E97_RS07330;Name=C9E97_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07330;old_locus_tag=C9E97_07505
NZ_PYKA01000053.1	Protein Homology	CDS	31619	32017	.	+	0	ID=cds-WP_023227527.1;Parent=gene-C9E97_RS07330;Dbxref=GenBank:WP_023227527.1;Name=WP_023227527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460560.1;locus_tag=C9E97_RS07330;product=hypothetical protein;protein_id=WP_023227527.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	32050	32280	.	+	.	ID=gene-C9E97_RS07335;Name=C9E97_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07335;old_locus_tag=C9E97_07510
NZ_PYKA01000053.1	Protein Homology	CDS	32050	32280	.	+	0	ID=cds-WP_135369594.1;Parent=gene-C9E97_RS07335;Dbxref=GenBank:WP_135369594.1;Name=WP_135369594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448018.1;locus_tag=C9E97_RS07335;product=hypothetical protein;protein_id=WP_135369594.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	32540	33310	.	+	.	ID=gene-C9E97_RS07340;Name=C9E97_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07340;old_locus_tag=C9E97_07515
NZ_PYKA01000053.1	Protein Homology	CDS	32540	33310	.	+	0	ID=cds-WP_135369595.1;Parent=gene-C9E97_RS07340;Dbxref=GenBank:WP_135369595.1;Name=WP_135369595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460558.1;locus_tag=C9E97_RS07340;product=M15 family metallopeptidase;protein_id=WP_135369595.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	33446	34870	.	+	.	ID=gene-C9E97_RS07345;Name=ycdR;gbkey=Gene;gene=ycdR;gene_biotype=protein_coding;locus_tag=C9E97_RS07345;old_locus_tag=C9E97_07520
NZ_PYKA01000053.1	Protein Homology	CDS	33446	34870	.	+	0	ID=cds-WP_000760692.1;Parent=gene-C9E97_RS07345;Dbxref=GenBank:WP_000760692.1;Name=WP_000760692.1;gbkey=CDS;gene=ycdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460557.1;locus_tag=C9E97_RS07345;product=GntR family transcriptional regulator YdcR;protein_id=WP_000760692.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	34985	36430	.	+	.	ID=gene-C9E97_RS07350;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=C9E97_RS07350;old_locus_tag=C9E97_07525
NZ_PYKA01000053.1	Protein Homology	CDS	34985	36430	.	+	0	ID=cds-WP_135369596.1;Parent=gene-C9E97_RS07350;Dbxref=GenBank:WP_135369596.1;Name=WP_135369596.1;Ontology_term=GO:0009447,GO:0019145,GO:0051287;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase (NAD+) activity|0019145||IEA,NAD binding|0051287||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460556.3;locus_tag=C9E97_RS07350;product=aminobutyraldehyde dehydrogenase;protein_id=WP_135369596.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	36535	36630	.	-	.	ID=gene-C9E97_RS07355;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=C9E97_RS07355;old_locus_tag=C9E97_07530
NZ_PYKA01000053.1	Protein Homology	CDS	36535	36630	.	-	0	ID=cds-WP_001103198.1;Parent=gene-C9E97_RS07355;Dbxref=GenBank:WP_001103198.1;Name=WP_001103198.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103198.1;locus_tag=C9E97_RS07355;product=stress response membrane protein YncL;protein_id=WP_001103198.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	36829	37002	.	+	.	ID=gene-C9E97_RS07360;Name=C9E97_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07360;old_locus_tag=C9E97_07535
NZ_PYKA01000053.1	Protein Homology	CDS	36829	37002	.	+	0	ID=cds-WP_000171943.1;Parent=gene-C9E97_RS07360;Dbxref=GenBank:WP_000171943.1;Name=WP_000171943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=C9E97_RS07360;product=GhoT/OrtT family toxin;protein_id=WP_000171943.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	37047	39191	.	-	.	ID=gene-C9E97_RS07365;Name=srfC;gbkey=Gene;gene=srfC;gene_biotype=protein_coding;locus_tag=C9E97_RS07365;old_locus_tag=C9E97_07540
NZ_PYKA01000053.1	Protein Homology	CDS	37047	39191	.	-	0	ID=cds-WP_135369597.1;Parent=gene-C9E97_RS07365;Dbxref=GenBank:WP_135369597.1;Name=WP_135369597.1;gbkey=CDS;gene=srfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460554.1;locus_tag=C9E97_RS07365;product=virulence-associated effector SrfC;protein_id=WP_135369597.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	39188	42169	.	-	.	ID=gene-C9E97_RS07370;Name=C9E97_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07370;old_locus_tag=C9E97_07545
NZ_PYKA01000053.1	Protein Homology	CDS	39188	42169	.	-	0	ID=cds-WP_045341132.1;Parent=gene-C9E97_RS07370;Dbxref=GenBank:WP_045341132.1;Name=WP_045341132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=C9E97_RS07370;product=virulence factor SrfB;protein_id=WP_045341132.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	42174	43499	.	-	.	ID=gene-C9E97_RS07375;Name=srfA;gbkey=Gene;gene=srfA;gene_biotype=protein_coding;locus_tag=C9E97_RS07375;old_locus_tag=C9E97_07550
NZ_PYKA01000053.1	Protein Homology	CDS	42174	43499	.	-	0	ID=cds-WP_023236809.1;Parent=gene-C9E97_RS07375;Dbxref=GenBank:WP_023236809.1;Name=WP_023236809.1;gbkey=CDS;gene=srfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=C9E97_RS07375;product=virulence-associated effector SrfA;protein_id=WP_023236809.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	43723	43956	.	+	.	ID=gene-C9E97_RS07380;Name=C9E97_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07380;old_locus_tag=C9E97_07555
NZ_PYKA01000053.1	Protein Homology	CDS	43723	43956	.	+	0	ID=cds-WP_000018720.1;Parent=gene-C9E97_RS07380;Dbxref=GenBank:WP_000018720.1;Name=WP_000018720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460551.1;locus_tag=C9E97_RS07380;product=YdcY family protein;protein_id=WP_000018720.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	43961	44410	.	-	.	ID=gene-C9E97_RS07385;Name=C9E97_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07385;old_locus_tag=C9E97_07560
NZ_PYKA01000053.1	Protein Homology	CDS	43961	44410	.	-	0	ID=cds-WP_001076571.1;Parent=gene-C9E97_RS07385;Dbxref=GenBank:WP_001076571.1;Name=WP_001076571.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460550.1;locus_tag=C9E97_RS07385;product=DMT family transporter;protein_id=WP_001076571.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	44410	44925	.	-	.	ID=gene-C9E97_RS07390;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=C9E97_RS07390;old_locus_tag=C9E97_07565
NZ_PYKA01000053.1	Protein Homology	CDS	44410	44925	.	-	0	ID=cds-WP_079951826.1;Parent=gene-C9E97_RS07390;Dbxref=GenBank:WP_079951826.1;Name=WP_079951826.1;Note=Keep exception level- 87%25 similar to E. coli K12 P76112%2C different gene symbol;gbkey=CDS;gene=mddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460549.1;locus_tag=C9E97_RS07390;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=WP_079951826.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	45149	46186	.	+	.	ID=gene-C9E97_RS07395;Name=C9E97_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07395;old_locus_tag=C9E97_07570
NZ_PYKA01000053.1	Protein Homology	CDS	45149	46186	.	+	0	ID=cds-WP_135369598.1;Parent=gene-C9E97_RS07395;Dbxref=GenBank:WP_135369598.1;Name=WP_135369598.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517827.1;locus_tag=C9E97_RS07395;product=NADP-dependent oxidoreductase;protein_id=WP_135369598.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	46520	47185	.	+	.	ID=gene-C9E97_RS07400;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=C9E97_RS07400;old_locus_tag=C9E97_07575
NZ_PYKA01000053.1	Protein Homology	CDS	46520	47185	.	+	0	ID=cds-WP_001119592.1;Parent=gene-C9E97_RS07400;Dbxref=GenBank:WP_001119592.1;Name=WP_001119592.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460547.1;locus_tag=C9E97_RS07400;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=WP_001119592.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	47241	49361	.	-	.	ID=gene-C9E97_RS07405;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=protein_coding;locus_tag=C9E97_RS07405;old_locus_tag=C9E97_07580
NZ_PYKA01000053.1	Protein Homology	CDS	47241	49361	.	-	0	ID=cds-WP_135369599.1;Parent=gene-C9E97_RS07405;Dbxref=GenBank:WP_135369599.1;Name=WP_135369599.1;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460546.1;locus_tag=C9E97_RS07405;product=TonB-dependent receptor PqqU;protein_id=WP_135369599.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	49625	50686	.	+	.	ID=gene-C9E97_RS07410;Name=C9E97_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07410;old_locus_tag=C9E97_07585
NZ_PYKA01000053.1	Protein Homology	CDS	49625	50686	.	+	0	ID=cds-WP_135369600.1;Parent=gene-C9E97_RS07410;Dbxref=GenBank:WP_135369600.1;Name=WP_135369600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460545.1;locus_tag=C9E97_RS07410;product=YncE family protein;protein_id=WP_135369600.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	50831	51052	.	+	.	ID=gene-C9E97_RS07415;Name=C9E97_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07415;old_locus_tag=C9E97_07590
NZ_PYKA01000053.1	Protein Homology	CDS	50831	51052	.	+	0	ID=cds-WP_000732362.1;Parent=gene-C9E97_RS07415;Dbxref=GenBank:WP_000732362.1;Name=WP_000732362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460544.1;locus_tag=C9E97_RS07415;product=YgdI/YgdR family lipoprotein;protein_id=WP_000732362.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	51129	52622	.	-	.	ID=gene-C9E97_RS07420;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=C9E97_RS07420;old_locus_tag=C9E97_07595
NZ_PYKA01000053.1	Protein Homology	CDS	51129	52622	.	-	0	ID=cds-WP_000857110.1;Parent=gene-C9E97_RS07420;Dbxref=GenBank:WP_000857110.1;Name=WP_000857110.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460543.1;locus_tag=C9E97_RS07420;product=L-asparagine permease;protein_id=WP_000857110.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	53135	53767	.	+	.	ID=gene-C9E97_RS07430;Name=steA;gbkey=Gene;gene=steA;gene_biotype=protein_coding;locus_tag=C9E97_RS07430;old_locus_tag=C9E97_07605
NZ_PYKA01000053.1	Protein Homology	CDS	53135	53767	.	+	0	ID=cds-WP_135369601.1;Parent=gene-C9E97_RS07430;Dbxref=GenBank:WP_135369601.1;Name=WP_135369601.1;gbkey=CDS;gene=steA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460542.1;locus_tag=C9E97_RS07430;product=type III secretion system effector SteA;protein_id=WP_135369601.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	54051	54896	.	+	.	ID=gene-C9E97_RS07435;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=C9E97_RS07435;old_locus_tag=C9E97_07610
NZ_PYKA01000053.1	Protein Homology	CDS	54051	54896	.	+	0	ID=cds-WP_000200329.1;Parent=gene-C9E97_RS07435;Dbxref=GenBank:WP_000200329.1;Name=WP_000200329.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460541.1;locus_tag=C9E97_RS07435;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_000200329.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	54932	55825	.	-	.	ID=gene-C9E97_RS07440;Name=C9E97_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07440;old_locus_tag=C9E97_07615
NZ_PYKA01000053.1	Protein Homology	CDS	54932	55825	.	-	0	ID=cds-WP_135369602.1;Parent=gene-C9E97_RS07440;Dbxref=GenBank:WP_135369602.1;Name=WP_135369602.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460540.1;locus_tag=C9E97_RS07440;product=PhzF family isomerase;protein_id=WP_135369602.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	55931	56611	.	-	.	ID=gene-C9E97_RS07445;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=C9E97_RS07445;old_locus_tag=C9E97_07620
NZ_PYKA01000053.1	Protein Homology	CDS	55931	56611	.	-	0	ID=cds-WP_000617106.1;Parent=gene-C9E97_RS07445;Dbxref=GenBank:WP_000617106.1;Name=WP_000617106.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460539.1;locus_tag=C9E97_RS07445;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000617106.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	56608	57303	.	-	.	ID=gene-C9E97_RS07450;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=C9E97_RS07450;old_locus_tag=C9E97_07625
NZ_PYKA01000053.1	Protein Homology	CDS	56608	57303	.	-	0	ID=cds-WP_001166287.1;Parent=gene-C9E97_RS07450;Dbxref=GenBank:WP_001166287.1;Name=WP_001166287.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460538.1;locus_tag=C9E97_RS07450;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_001166287.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	57303	58847	.	-	.	ID=gene-C9E97_RS07455;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=C9E97_RS07455;old_locus_tag=C9E97_07630
NZ_PYKA01000053.1	Protein Homology	CDS	57303	58847	.	-	0	ID=cds-WP_135369603.1;Parent=gene-C9E97_RS07455;Dbxref=GenBank:WP_135369603.1;Name=WP_135369603.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460537.1;locus_tag=C9E97_RS07455;product=nitrate reductase subunit beta;protein_id=WP_135369603.1;transl_table=11
NZ_PYKA01000053.1	RefSeq	gene	58844	60222	.	-	.	ID=gene-C9E97_RS07460;Name=C9E97_RS07460;end_range=60222,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07460;old_locus_tag=C9E97_07635;partial=true
NZ_PYKA01000053.1	Protein Homology	CDS	58844	60222	.	-	2	ID=cds-WP_080200345.1;Parent=gene-C9E97_RS07460;Dbxref=GenBank:WP_080200345.1;Name=WP_080200345.1;Ontology_term=GO:0016491,GO:0043546;end_range=60222,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=C9E97_RS07460;partial=true;product=molybdopterin dinucleotide binding domain-containing protein;protein_id=WP_080200345.1;transl_table=11
##sequence-region NZ_PYKA01000035.1 1 58735
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000035.1	RefSeq	region	1	58735	.	+	.	ID=NZ_PYKA01000035.1:1..58735;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000035.1	RefSeq	gene	367	927	.	+	.	ID=gene-C9E97_RS04135;Name=stfA;gbkey=Gene;gene=stfA;gene_biotype=protein_coding;locus_tag=C9E97_RS04135;old_locus_tag=C9E97_04250
NZ_PYKA01000035.1	Protein Homology	CDS	367	927	.	+	0	ID=cds-WP_001090553.1;Parent=gene-C9E97_RS04135;Dbxref=GenBank:WP_001090553.1;Name=WP_001090553.1;gbkey=CDS;gene=stfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459200.1;locus_tag=C9E97_RS04135;product=fimbrial major subunit StfA;protein_id=WP_001090553.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	1013	3670	.	+	.	ID=gene-C9E97_RS04140;Name=C9E97_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04140;old_locus_tag=C9E97_04255
NZ_PYKA01000035.1	Protein Homology	CDS	1013	3670	.	+	0	ID=cds-WP_135369497.1;Parent=gene-C9E97_RS04140;Dbxref=GenBank:WP_135369497.1;Name=WP_135369497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459201.1;locus_tag=C9E97_RS04140;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_135369497.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	3688	4440	.	+	.	ID=gene-C9E97_RS04145;Name=stfD;gbkey=Gene;gene=stfD;gene_biotype=protein_coding;locus_tag=C9E97_RS04145;old_locus_tag=C9E97_04260
NZ_PYKA01000035.1	Protein Homology	CDS	3688	4440	.	+	0	ID=cds-WP_135369498.1;Parent=gene-C9E97_RS04145;Dbxref=GenBank:WP_135369498.1;Name=WP_135369498.1;gbkey=CDS;gene=stfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459202.1;locus_tag=C9E97_RS04145;product=fimbrial chaperone StfD;protein_id=WP_135369498.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	4459	4971	.	+	.	ID=gene-C9E97_RS04150;Name=C9E97_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04150;old_locus_tag=C9E97_04265
NZ_PYKA01000035.1	Protein Homology	CDS	4459	4971	.	+	0	ID=cds-WP_001250313.1;Parent=gene-C9E97_RS04150;Dbxref=GenBank:WP_001250313.1;Name=WP_001250313.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459203.1;locus_tag=C9E97_RS04150;product=fimbrial protein;protein_id=WP_001250313.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	4968	5444	.	+	.	ID=gene-C9E97_RS04155;Name=stfF;gbkey=Gene;gene=stfF;gene_biotype=protein_coding;locus_tag=C9E97_RS04155;old_locus_tag=C9E97_04270
NZ_PYKA01000035.1	Protein Homology	CDS	4968	5444	.	+	0	ID=cds-WP_000725074.1;Parent=gene-C9E97_RS04155;Dbxref=GenBank:WP_000725074.1;Name=WP_000725074.1;gbkey=CDS;gene=stfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459204.1;locus_tag=C9E97_RS04155;product=fimbrial minor subunit StfF;protein_id=WP_000725074.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	5444	5974	.	+	.	ID=gene-C9E97_RS04160;Name=C9E97_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04160;old_locus_tag=C9E97_04275
NZ_PYKA01000035.1	Protein Homology	CDS	5444	5974	.	+	0	ID=cds-WP_001129312.1;Parent=gene-C9E97_RS04160;Dbxref=GenBank:WP_001129312.1;Name=WP_001129312.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459205.1;locus_tag=C9E97_RS04160;product=fimbrial protein;protein_id=WP_001129312.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	5974	6813	.	+	.	ID=gene-C9E97_RS04165;Name=stfH;gbkey=Gene;gene=stfH;gene_biotype=protein_coding;locus_tag=C9E97_RS04165;old_locus_tag=C9E97_04280
NZ_PYKA01000035.1	Protein Homology	CDS	5974	6813	.	+	0	ID=cds-WP_135369499.1;Parent=gene-C9E97_RS04165;Dbxref=GenBank:WP_135369499.1;Name=WP_135369499.1;gbkey=CDS;gene=stfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459206.1;locus_tag=C9E97_RS04165;product=fimbrial adhesin StfH;protein_id=WP_135369499.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	6921	8201	.	-	.	ID=gene-C9E97_RS04170;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=C9E97_RS04170;old_locus_tag=C9E97_04285
NZ_PYKA01000035.1	Protein Homology	CDS	6921	8201	.	-	0	ID=cds-WP_135369500.1;Parent=gene-C9E97_RS04170;Dbxref=GenBank:WP_135369500.1;Name=WP_135369500.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=C9E97_RS04170;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_135369500.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	8371	9792	.	+	.	ID=gene-C9E97_RS04175;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=C9E97_RS04175;old_locus_tag=C9E97_04290
NZ_PYKA01000035.1	Protein Homology	CDS	8371	9792	.	+	0	ID=cds-WP_000845428.1;Parent=gene-C9E97_RS04175;Dbxref=GenBank:WP_000845428.1;Name=WP_000845428.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459208.1;locus_tag=C9E97_RS04175;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_000845428.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	9874	10218	.	+	.	ID=gene-C9E97_RS04180;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=C9E97_RS04180;old_locus_tag=C9E97_04295
NZ_PYKA01000035.1	Protein Homology	CDS	9874	10218	.	+	0	ID=cds-WP_001278668.1;Parent=gene-C9E97_RS04180;Dbxref=GenBank:WP_001278668.1;Name=WP_001278668.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=C9E97_RS04180;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001278668.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	10319	10942	.	-	.	ID=gene-C9E97_RS04185;Name=C9E97_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04185;old_locus_tag=C9E97_04300
NZ_PYKA01000035.1	Protein Homology	CDS	10319	10942	.	-	0	ID=cds-WP_000964234.1;Parent=gene-C9E97_RS04185;Dbxref=GenBank:WP_000964234.1;Name=WP_000964234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459210.1;locus_tag=C9E97_RS04185;product=TRIC cation channel family protein;protein_id=WP_000964234.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	10979	11779	.	-	.	ID=gene-C9E97_RS04190;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=C9E97_RS04190;old_locus_tag=C9E97_04305
NZ_PYKA01000035.1	Protein Homology	CDS	10979	11779	.	-	0	ID=cds-WP_001118838.1;Parent=gene-C9E97_RS04190;Dbxref=GenBank:WP_001118838.1;Name=WP_001118838.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459211.1;locus_tag=C9E97_RS04190;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_001118838.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	11772	12470	.	-	.	ID=gene-C9E97_RS04195;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=C9E97_RS04195;old_locus_tag=C9E97_04310
NZ_PYKA01000035.1	Protein Homology	CDS	11772	12470	.	-	0	ID=cds-WP_000689822.1;Parent=gene-C9E97_RS04195;Dbxref=GenBank:WP_000689822.1;Name=WP_000689822.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459212.1;locus_tag=C9E97_RS04195;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_000689822.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	12555	14072	.	+	.	ID=gene-C9E97_RS04200;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=C9E97_RS04200;old_locus_tag=C9E97_04315
NZ_PYKA01000035.1	Protein Homology	CDS	12555	14072	.	+	0	ID=cds-WP_000146455.1;Parent=gene-C9E97_RS04200;Dbxref=GenBank:WP_000146455.1;Name=WP_000146455.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459213.1;locus_tag=C9E97_RS04200;product=dGTPase;protein_id=WP_000146455.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	14202	15629	.	+	.	ID=gene-C9E97_RS04205;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=C9E97_RS04205;old_locus_tag=C9E97_04320
NZ_PYKA01000035.1	Protein Homology	CDS	14202	15629	.	+	0	ID=cds-WP_000753958.1;Parent=gene-C9E97_RS04205;Dbxref=GenBank:WP_000753958.1;Name=WP_000753958.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=C9E97_RS04205;product=serine endoprotease DegP;protein_id=WP_000753958.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	15782	16939	.	+	.	ID=gene-C9E97_RS04210;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=C9E97_RS04210;old_locus_tag=C9E97_04325
NZ_PYKA01000035.1	Protein Homology	CDS	15782	16939	.	+	0	ID=cds-WP_000929420.1;Parent=gene-C9E97_RS04210;Dbxref=GenBank:WP_000929420.1;Name=WP_000929420.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=C9E97_RS04210;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_000929420.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	17028	17414	.	-	.	ID=gene-C9E97_RS04215;Name=C9E97_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04215;old_locus_tag=C9E97_04330
NZ_PYKA01000035.1	Protein Homology	CDS	17028	17414	.	-	0	ID=cds-WP_000272193.1;Parent=gene-C9E97_RS04215;Dbxref=GenBank:WP_000272193.1;Name=WP_000272193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=C9E97_RS04215;product=DUF3461 family protein;protein_id=WP_000272193.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	17661	18962	.	+	.	ID=gene-C9E97_RS04220;Name=C9E97_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04220;old_locus_tag=C9E97_04335
NZ_PYKA01000035.1	Protein Homology	CDS	17661	18962	.	+	0	ID=cds-WP_079903188.1;Parent=gene-C9E97_RS04220;Dbxref=GenBank:WP_079903188.1;Name=WP_079903188.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=C9E97_RS04220;product=MFS transporter;protein_id=WP_079903188.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	18999	19823	.	-	.	ID=gene-C9E97_RS04225;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=C9E97_RS04225;old_locus_tag=C9E97_04340
NZ_PYKA01000035.1	Protein Homology	CDS	18999	19823	.	-	0	ID=cds-WP_001186673.1;Parent=gene-C9E97_RS04225;Dbxref=GenBank:WP_001186673.1;Name=WP_001186673.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=C9E97_RS04225;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186673.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	19853	22525	.	-	.	ID=gene-C9E97_RS04230;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=C9E97_RS04230;old_locus_tag=C9E97_04345
NZ_PYKA01000035.1	Protein Homology	CDS	19853	22525	.	-	0	ID=cds-WP_001094519.1;Parent=gene-C9E97_RS04230;Dbxref=GenBank:WP_001094519.1;Name=WP_001094519.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459219.1;locus_tag=C9E97_RS04230;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_001094519.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	22763	23557	.	-	.	ID=gene-C9E97_RS04235;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=C9E97_RS04235;old_locus_tag=C9E97_04355
NZ_PYKA01000035.1	Protein Homology	CDS	22763	23557	.	-	0	ID=cds-WP_001018214.1;Parent=gene-C9E97_RS04235;Dbxref=GenBank:WP_001018214.1;Name=WP_001018214.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459220.1;locus_tag=C9E97_RS04235;product=type I methionyl aminopeptidase;protein_id=WP_001018214.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	24008	24733	.	+	.	ID=gene-C9E97_RS04240;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=C9E97_RS04240;old_locus_tag=C9E97_04360
NZ_PYKA01000035.1	Protein Homology	CDS	24008	24733	.	+	0	ID=cds-WP_000246886.1;Parent=gene-C9E97_RS04240;Dbxref=GenBank:WP_000246886.1;Name=WP_000246886.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=C9E97_RS04240;product=30S ribosomal protein S2;protein_id=WP_000246886.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	24991	25842	.	+	.	ID=gene-C9E97_RS04245;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=C9E97_RS04245;old_locus_tag=C9E97_04370
NZ_PYKA01000035.1	Protein Homology	CDS	24991	25842	.	+	0	ID=cds-WP_000808106.1;Parent=gene-C9E97_RS04245;Dbxref=GenBank:WP_000808106.1;Name=WP_000808106.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=C9E97_RS04245;product=translation elongation factor Ts;protein_id=WP_000808106.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	25987	26712	.	+	.	ID=gene-C9E97_RS04250;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=C9E97_RS04250;old_locus_tag=C9E97_04375
NZ_PYKA01000035.1	Protein Homology	CDS	25987	26712	.	+	0	ID=cds-WP_000224567.1;Parent=gene-C9E97_RS04250;Dbxref=GenBank:WP_000224567.1;Name=WP_000224567.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=C9E97_RS04250;product=UMP kinase;protein_id=WP_000224567.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	26859	27416	.	+	.	ID=gene-C9E97_RS04255;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=C9E97_RS04255;old_locus_tag=C9E97_04380
NZ_PYKA01000035.1	Protein Homology	CDS	26859	27416	.	+	0	ID=cds-WP_000622423.1;Parent=gene-C9E97_RS04255;Dbxref=GenBank:WP_000622423.1;Name=WP_000622423.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=C9E97_RS04255;product=ribosome recycling factor;protein_id=WP_000622423.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	27557	28753	.	+	.	ID=gene-C9E97_RS04260;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=C9E97_RS04260;old_locus_tag=C9E97_04385
NZ_PYKA01000035.1	Protein Homology	CDS	27557	28753	.	+	0	ID=cds-WP_023891075.1;Parent=gene-C9E97_RS04260;Dbxref=GenBank:WP_023891075.1;Name=WP_023891075.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459225.1;locus_tag=C9E97_RS04260;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_023891075.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	29066	29824	.	+	.	ID=gene-C9E97_RS04265;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=C9E97_RS04265;old_locus_tag=C9E97_04395
NZ_PYKA01000035.1	Protein Homology	CDS	29066	29824	.	+	0	ID=cds-WP_000947413.1;Parent=gene-C9E97_RS04265;Dbxref=GenBank:WP_000947413.1;Name=WP_000947413.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459226.1;locus_tag=C9E97_RS04265;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_000947413.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	29837	30694	.	+	.	ID=gene-C9E97_RS04270;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=C9E97_RS04270;old_locus_tag=C9E97_04400
NZ_PYKA01000035.1	Protein Homology	CDS	29837	30694	.	+	0	ID=cds-WP_000922422.1;Parent=gene-C9E97_RS04270;Dbxref=GenBank:WP_000922422.1;Name=WP_000922422.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459227.1;locus_tag=C9E97_RS04270;product=phosphatidate cytidylyltransferase;protein_id=WP_000922422.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	30706	32058	.	+	.	ID=gene-C9E97_RS04275;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=C9E97_RS04275;old_locus_tag=C9E97_04405
NZ_PYKA01000035.1	Protein Homology	CDS	30706	32058	.	+	0	ID=cds-WP_000949017.1;Parent=gene-C9E97_RS04275;Dbxref=GenBank:WP_000949017.1;Name=WP_000949017.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=C9E97_RS04275;product=sigma E protease regulator RseP;protein_id=WP_000949017.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	32090	34501	.	+	.	ID=gene-C9E97_RS04280;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=C9E97_RS04280;old_locus_tag=C9E97_04410
NZ_PYKA01000035.1	Protein Homology	CDS	32090	34501	.	+	0	ID=cds-WP_001240924.1;Parent=gene-C9E97_RS04280;Dbxref=GenBank:WP_001240924.1;Name=WP_001240924.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459229.1;locus_tag=C9E97_RS04280;product=outer membrane protein assembly factor BamA;protein_id=WP_001240924.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	34624	35109	.	+	.	ID=gene-C9E97_RS04285;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=C9E97_RS04285;old_locus_tag=C9E97_04415
NZ_PYKA01000035.1	Protein Homology	CDS	34624	35109	.	+	0	ID=cds-WP_000758966.1;Parent=gene-C9E97_RS04285;Dbxref=GenBank:WP_000758966.1;Name=WP_000758966.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459230.1;locus_tag=C9E97_RS04285;product=molecular chaperone Skp;protein_id=WP_000758966.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	35113	36138	.	+	.	ID=gene-C9E97_RS04290;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=C9E97_RS04290;old_locus_tag=C9E97_04420
NZ_PYKA01000035.1	Protein Homology	CDS	35113	36138	.	+	0	ID=cds-WP_001139265.1;Parent=gene-C9E97_RS04290;Dbxref=GenBank:WP_001139265.1;Name=WP_001139265.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=C9E97_RS04290;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_001139265.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	36244	36699	.	+	.	ID=gene-C9E97_RS04295;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=C9E97_RS04295;old_locus_tag=C9E97_04425
NZ_PYKA01000035.1	Protein Homology	CDS	36244	36699	.	+	0	ID=cds-WP_000210741.1;Parent=gene-C9E97_RS04295;Dbxref=GenBank:WP_000210741.1;Name=WP_000210741.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=C9E97_RS04295;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000210741.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	36703	37491	.	+	.	ID=gene-C9E97_RS04300;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=C9E97_RS04300;old_locus_tag=C9E97_04430
NZ_PYKA01000035.1	Protein Homology	CDS	36703	37491	.	+	0	ID=cds-WP_000565950.1;Parent=gene-C9E97_RS04300;Dbxref=GenBank:WP_000565950.1;Name=WP_000565950.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=C9E97_RS04300;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_000565950.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	37491	38639	.	+	.	ID=gene-C9E97_RS04305;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=C9E97_RS04305;old_locus_tag=C9E97_04435
NZ_PYKA01000035.1	Protein Homology	CDS	37491	38639	.	+	0	ID=cds-WP_135369501.1;Parent=gene-C9E97_RS04305;Dbxref=GenBank:WP_135369501.1;Name=WP_135369501.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459234.1;locus_tag=C9E97_RS04305;product=lipid-A-disaccharide synthase;protein_id=WP_135369501.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	38636	39232	.	+	.	ID=gene-C9E97_RS04310;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=C9E97_RS04310;old_locus_tag=C9E97_04440
NZ_PYKA01000035.1	Protein Homology	CDS	38636	39232	.	+	0	ID=cds-WP_000569412.1;Parent=gene-C9E97_RS04310;Dbxref=GenBank:WP_000569412.1;Name=WP_000569412.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459235.1;locus_tag=C9E97_RS04310;product=ribonuclease HII;protein_id=WP_000569412.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	39256	42738	.	+	.	ID=gene-C9E97_RS04315;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=C9E97_RS04315;old_locus_tag=C9E97_04445
NZ_PYKA01000035.1	Protein Homology	CDS	39256	42738	.	+	0	ID=cds-WP_135369502.1;Parent=gene-C9E97_RS04315;Dbxref=GenBank:WP_135369502.1;Name=WP_135369502.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459236.1;locus_tag=C9E97_RS04315;product=DNA polymerase III subunit alpha;protein_id=WP_135369502.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	42751	43710	.	+	.	ID=gene-C9E97_RS04320;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=C9E97_RS04320;old_locus_tag=C9E97_04450
NZ_PYKA01000035.1	Protein Homology	CDS	42751	43710	.	+	0	ID=cds-WP_000055753.1;Parent=gene-C9E97_RS04320;Dbxref=GenBank:WP_000055753.1;Name=WP_000055753.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=C9E97_RS04320;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_000055753.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	43890	45653	.	+	.	ID=gene-C9E97_RS04325;Name=C9E97_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04325;old_locus_tag=C9E97_04455
NZ_PYKA01000035.1	Protein Homology	CDS	43890	45653	.	+	0	ID=cds-WP_000524168.1;Parent=gene-C9E97_RS04325;Dbxref=GenBank:WP_000524168.1;Name=WP_000524168.1;Ontology_term=GO:0006032,GO:0016998,GO:0004568;gbkey=CDS;go_function=chitinase activity|0004568||IEA;go_process=chitin catabolic process|0006032||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459238.1;locus_tag=C9E97_RS04325;product=chitinase;protein_id=WP_000524168.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	45729	47870	.	+	.	ID=gene-C9E97_RS04330;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=C9E97_RS04330;old_locus_tag=C9E97_04460
NZ_PYKA01000035.1	Protein Homology	CDS	45729	47870	.	+	0	ID=cds-WP_135369503.1;Parent=gene-C9E97_RS04330;Dbxref=GenBank:WP_135369503.1;Name=WP_135369503.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459239.1;locus_tag=C9E97_RS04330;product=lysine decarboxylase LdcC;protein_id=WP_135369503.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	47926	48315	.	+	.	ID=gene-C9E97_RS04335;Name=C9E97_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04335;old_locus_tag=C9E97_04465
NZ_PYKA01000035.1	Protein Homology	CDS	47926	48315	.	+	0	ID=cds-WP_000901088.1;Parent=gene-C9E97_RS04335;Dbxref=GenBank:WP_000901088.1;Name=WP_000901088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459240.1;locus_tag=C9E97_RS04335;product=VOC family protein;protein_id=WP_000901088.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	48378	49670	.	+	.	ID=gene-C9E97_RS04340;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=C9E97_RS04340;old_locus_tag=C9E97_04470
NZ_PYKA01000035.1	Protein Homology	CDS	48378	49670	.	+	0	ID=cds-WP_135369504.1;Parent=gene-C9E97_RS04340;Dbxref=GenBank:WP_135369504.1;Name=WP_135369504.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459241.1;locus_tag=C9E97_RS04340;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_135369504.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	49754	50014	.	-	.	ID=gene-C9E97_RS04345;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=C9E97_RS04345;old_locus_tag=C9E97_04475
NZ_PYKA01000035.1	Protein Homology	CDS	49754	50014	.	-	0	ID=cds-WP_000062330.1;Parent=gene-C9E97_RS04345;Dbxref=GenBank:WP_000062330.1;Name=WP_000062330.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459242.1;locus_tag=C9E97_RS04345;product=Rho-binding antiterminator;protein_id=WP_000062330.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	50001	50201	.	-	.	ID=gene-C9E97_RS04350;Name=C9E97_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04350;old_locus_tag=C9E97_04480
NZ_PYKA01000035.1	Protein Homology	CDS	50001	50201	.	-	0	ID=cds-WP_001518678.1;Parent=gene-C9E97_RS04350;Dbxref=GenBank:WP_001518678.1;Name=WP_001518678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=C9E97_RS04350;product=YaeP family protein;protein_id=WP_001518678.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	50399	50944	.	+	.	ID=gene-C9E97_RS04355;Name=C9E97_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04355;old_locus_tag=C9E97_04485
NZ_PYKA01000035.1	Protein Homology	CDS	50399	50944	.	+	0	ID=cds-WP_001185319.1;Parent=gene-C9E97_RS04355;Dbxref=GenBank:WP_001185319.1;Name=WP_001185319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459244.1;locus_tag=C9E97_RS04355;product=YaeQ family protein;protein_id=WP_001185319.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	50941	51363	.	+	.	ID=gene-C9E97_RS04360;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=C9E97_RS04360;old_locus_tag=C9E97_04490
NZ_PYKA01000035.1	Protein Homology	CDS	50941	51363	.	+	0	ID=cds-WP_000560527.1;Parent=gene-C9E97_RS04360;Dbxref=GenBank:WP_000560527.1;Name=WP_000560527.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459245.1;locus_tag=C9E97_RS04360;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_000560527.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	51395	52096	.	+	.	ID=gene-C9E97_RS04365;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=C9E97_RS04365;old_locus_tag=C9E97_04495
NZ_PYKA01000035.1	Protein Homology	CDS	51395	52096	.	+	0	ID=cds-WP_000252576.1;Parent=gene-C9E97_RS04365;Dbxref=GenBank:WP_000252576.1;Name=WP_000252576.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006899150.1;locus_tag=C9E97_RS04365;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_000252576.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	52170	53888	.	-	.	ID=gene-C9E97_RS04370;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=C9E97_RS04370;old_locus_tag=C9E97_04500
NZ_PYKA01000035.1	Protein Homology	CDS	52170	53888	.	-	0	ID=cds-WP_001260687.1;Parent=gene-C9E97_RS04370;Dbxref=GenBank:WP_001260687.1;Name=WP_001260687.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=C9E97_RS04370;product=proline--tRNA ligase;protein_id=WP_001260687.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	53999	54706	.	-	.	ID=gene-C9E97_RS04375;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=C9E97_RS04375;old_locus_tag=C9E97_04505
NZ_PYKA01000035.1	Protein Homology	CDS	53999	54706	.	-	0	ID=cds-WP_000093988.1;Parent=gene-C9E97_RS04375;Dbxref=GenBank:WP_000093988.1;Name=WP_000093988.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459247.1;locus_tag=C9E97_RS04375;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_000093988.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	54703	55107	.	-	.	ID=gene-C9E97_RS04380;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=C9E97_RS04380;old_locus_tag=C9E97_04510
NZ_PYKA01000035.1	Protein Homology	CDS	54703	55107	.	-	0	ID=cds-WP_001202315.1;Parent=gene-C9E97_RS04380;Dbxref=GenBank:WP_001202315.1;Name=WP_001202315.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459248.1;locus_tag=C9E97_RS04380;product=Rcs stress response system protein RcsF;protein_id=WP_001202315.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	55226	56041	.	-	.	ID=gene-C9E97_RS04385;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=C9E97_RS04385;old_locus_tag=C9E97_04515
NZ_PYKA01000035.1	Protein Homology	CDS	55226	56041	.	-	0	ID=cds-WP_000874215.1;Parent=gene-C9E97_RS04385;Dbxref=GenBank:WP_000874215.1;Name=WP_000874215.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459249.1;locus_tag=C9E97_RS04385;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_000874215.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	56080	56733	.	-	.	ID=gene-C9E97_RS04390;Name=C9E97_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04390;old_locus_tag=C9E97_04520
NZ_PYKA01000035.1	Protein Homology	CDS	56080	56733	.	-	0	ID=cds-WP_001287486.1;Parent=gene-C9E97_RS04390;Dbxref=GenBank:WP_001287486.1;Name=WP_001287486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=C9E97_RS04390;product=methionine ABC transporter permease MetI;protein_id=WP_001287486.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	56726	57757	.	-	.	ID=gene-C9E97_RS04395;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=C9E97_RS04395;old_locus_tag=C9E97_04525
NZ_PYKA01000035.1	Protein Homology	CDS	56726	57757	.	-	0	ID=cds-WP_000594018.1;Parent=gene-C9E97_RS04395;Dbxref=GenBank:WP_000594018.1;Name=WP_000594018.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=C9E97_RS04395;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_000594018.1;transl_table=11
NZ_PYKA01000035.1	RefSeq	gene	57947	58513	.	+	.	ID=gene-C9E97_RS04400;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=C9E97_RS04400;old_locus_tag=C9E97_04530
NZ_PYKA01000035.1	Protein Homology	CDS	57947	58513	.	+	0	ID=cds-WP_135369505.1;Parent=gene-C9E97_RS04400;Dbxref=GenBank:WP_135369505.1;Name=WP_135369505.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459252.1;locus_tag=C9E97_RS04400;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_135369505.1;transl_table=11
##sequence-region NZ_PYKA01000137.1 1 58491
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000137.1	RefSeq	region	1	58491	.	+	.	ID=NZ_PYKA01000137.1:1..58491;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000137.1	RefSeq	gene	243	1109	.	-	.	ID=gene-C9E97_RS22830;Name=C9E97_RS22830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22830;old_locus_tag=C9E97_23370
NZ_PYKA01000137.1	Protein Homology	CDS	243	1109	.	-	0	ID=cds-WP_063809102.1;Parent=gene-C9E97_RS22830;Dbxref=GenBank:WP_063809102.1;Name=WP_063809102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000864146.1;locus_tag=C9E97_RS22830;product=HEAT repeat domain-containing protein;protein_id=WP_063809102.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	1171	1374	.	-	.	ID=gene-C9E97_RS24145;Name=C9E97_RS24145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS24145
NZ_PYKA01000137.1	Protein Homology	CDS	1171	1374	.	-	0	ID=cds-WP_135369147.1;Parent=gene-C9E97_RS24145;Dbxref=GenBank:WP_135369147.1;Name=WP_135369147.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026944.6;locus_tag=C9E97_RS24145;product=polymorphic toxin type 34 domain-containing protein;protein_id=WP_135369147.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	pseudogene	1325	1552	.	-	.	ID=gene-C9E97_RS22840;Name=C9E97_RS22840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS22840;old_locus_tag=C9E97_23375;partial=true;pseudo=true;start_range=.,1325
NZ_PYKA01000137.1	Protein Homology	CDS	1325	1552	.	-	0	ID=cds-C9E97_RS22840;Parent=gene-C9E97_RS22840;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415030.1;locus_tag=C9E97_RS22840;partial=true;product=type IV secretion protein Rhs;pseudo=true;start_range=.,1325;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	1616	1879	.	-	.	ID=gene-C9E97_RS22845;Name=C9E97_RS22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22845;old_locus_tag=C9E97_23380
NZ_PYKA01000137.1	GeneMarkS-2+	CDS	1616	1879	.	-	0	ID=cds-WP_186799034.1;Parent=gene-C9E97_RS22845;Dbxref=GenBank:WP_186799034.1;Name=WP_186799034.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E97_RS22845;product=hypothetical protein;protein_id=WP_186799034.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	1964	2344	.	-	.	ID=gene-C9E97_RS22850;Name=C9E97_RS22850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22850;old_locus_tag=C9E97_23385
NZ_PYKA01000137.1	Protein Homology	CDS	1964	2344	.	-	0	ID=cds-WP_023235690.1;Parent=gene-C9E97_RS22850;Dbxref=GenBank:WP_023235690.1;Name=WP_023235690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727381.1;locus_tag=C9E97_RS22850;product=hypothetical protein;protein_id=WP_023235690.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	2422	2790	.	-	.	ID=gene-C9E97_RS23605;Name=C9E97_RS23605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23605
NZ_PYKA01000137.1	GeneMarkS-2+	CDS	2422	2790	.	-	0	ID=cds-WP_186799036.1;Parent=gene-C9E97_RS23605;Dbxref=GenBank:WP_186799036.1;Name=WP_186799036.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E97_RS23605;product=hypothetical protein;protein_id=WP_186799036.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	pseudogene	2940	3146	.	-	.	ID=gene-C9E97_RS23610;Name=C9E97_RS23610;end_range=3146,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23610;partial=true;pseudo=true;start_range=.,2940
NZ_PYKA01000137.1	Protein Homology	CDS	2940	3146	.	-	0	ID=cds-C9E97_RS23610;Parent=gene-C9E97_RS23610;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3146,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415229.1;locus_tag=C9E97_RS23610;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,2940;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	3194	3607	.	-	.	ID=gene-C9E97_RS22860;Name=C9E97_RS22860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22860;old_locus_tag=C9E97_23395
NZ_PYKA01000137.1	GeneMarkS-2+	CDS	3194	3607	.	-	0	ID=cds-WP_135420193.1;Parent=gene-C9E97_RS22860;Dbxref=GenBank:WP_135420193.1;Name=WP_135420193.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E97_RS22860;product=hypothetical protein;protein_id=WP_135420193.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	pseudogene	3642	3939	.	-	.	ID=gene-C9E97_RS22865;Name=C9E97_RS22865;end_range=3939,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS22865;old_locus_tag=C9E97_23400;partial=true;pseudo=true;start_range=.,3642
NZ_PYKA01000137.1	Protein Homology	CDS	3642	3939	.	-	0	ID=cds-C9E97_RS22865;Parent=gene-C9E97_RS22865;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=3939,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=C9E97_RS22865;partial=true;product=ISAs1 family transposase;pseudo=true;start_range=.,3642;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	4330	4773	.	-	.	ID=gene-C9E97_RS22870;Name=C9E97_RS22870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22870;old_locus_tag=C9E97_23405
NZ_PYKA01000137.1	Protein Homology	CDS	4330	4773	.	-	0	ID=cds-WP_000646715.1;Parent=gene-C9E97_RS22870;Dbxref=GenBank:WP_000646715.1;Name=WP_000646715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646715.1;locus_tag=C9E97_RS22870;product=hypothetical protein;protein_id=WP_000646715.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	5320	5739	.	-	.	ID=gene-C9E97_RS22875;Name=C9E97_RS22875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22875;old_locus_tag=C9E97_23410
NZ_PYKA01000137.1	Protein Homology	CDS	5320	5739	.	-	0	ID=cds-WP_000502181.1;Parent=gene-C9E97_RS22875;Dbxref=GenBank:WP_000502181.1;Name=WP_000502181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000502176.1;locus_tag=C9E97_RS22875;product=hypothetical protein;protein_id=WP_000502181.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	pseudogene	6173	6369	.	-	.	ID=gene-C9E97_RS24015;Name=C9E97_RS24015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS24015;old_locus_tag=C9E97_23415;pseudo=true
NZ_PYKA01000137.1	Protein Homology	CDS	6173	6369	.	-	0	ID=cds-C9E97_RS24015;Parent=gene-C9E97_RS24015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497696.1;locus_tag=C9E97_RS24015;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	6394	7011	.	-	.	ID=gene-C9E97_RS22885;Name=C9E97_RS22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22885;old_locus_tag=C9E97_23420
NZ_PYKA01000137.1	Protein Homology	CDS	6394	7011	.	-	0	ID=cds-WP_135369627.1;Parent=gene-C9E97_RS22885;Dbxref=GenBank:WP_135369627.1;Name=WP_135369627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528503.1;locus_tag=C9E97_RS22885;product=hypothetical protein;protein_id=WP_135369627.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	7175	8536	.	+	.	ID=gene-C9E97_RS22890;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=C9E97_RS22890;old_locus_tag=C9E97_23425
NZ_PYKA01000137.1	Protein Homology	CDS	7175	8536	.	+	0	ID=cds-WP_001517981.1;Parent=gene-C9E97_RS22890;Dbxref=GenBank:WP_001517981.1;Name=WP_001517981.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461080.1;locus_tag=C9E97_RS22890;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_001517981.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	8988	10034	.	+	.	ID=gene-C9E97_RS22895;Name=sseK2;gbkey=Gene;gene=sseK2;gene_biotype=protein_coding;locus_tag=C9E97_RS22895;old_locus_tag=C9E97_23430
NZ_PYKA01000137.1	Protein Homology	CDS	8988	10034	.	+	0	ID=cds-WP_135369626.1;Parent=gene-C9E97_RS22895;Dbxref=GenBank:WP_135369626.1;Name=WP_135369626.1;gbkey=CDS;gene=sseK2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461081.1;locus_tag=C9E97_RS22895;product=type III secretion system effector arginine glycosyltransferase SseK2;protein_id=WP_135369626.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	10070	10486	.	-	.	ID=gene-C9E97_RS22900;Name=C9E97_RS22900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22900;old_locus_tag=C9E97_23435
NZ_PYKA01000137.1	Protein Homology	CDS	10070	10486	.	-	0	ID=cds-WP_001555792.1;Parent=gene-C9E97_RS22900;Dbxref=GenBank:WP_001555792.1;Name=WP_001555792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461082.1;locus_tag=C9E97_RS22900;product=CesT family type III secretion system chaperone;protein_id=WP_001555792.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	10608	10943	.	-	.	ID=gene-C9E97_RS22905;Name=steD;gbkey=Gene;gene=steD;gene_biotype=protein_coding;locus_tag=C9E97_RS22905;old_locus_tag=C9E97_23440
NZ_PYKA01000137.1	Protein Homology	CDS	10608	10943	.	-	0	ID=cds-WP_001581073.1;Parent=gene-C9E97_RS22905;Dbxref=GenBank:WP_001581073.1;Name=WP_001581073.1;gbkey=CDS;gene=steD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461083.1;locus_tag=C9E97_RS22905;product=type III secretion system effector SteD;protein_id=WP_001581073.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	11508	12407	.	+	.	ID=gene-C9E97_RS22910;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=C9E97_RS22910;old_locus_tag=C9E97_23445
NZ_PYKA01000137.1	Protein Homology	CDS	11508	12407	.	+	0	ID=cds-WP_135369625.1;Parent=gene-C9E97_RS22910;Dbxref=GenBank:WP_135369625.1;Name=WP_135369625.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461084.1;locus_tag=C9E97_RS22910;product=lipid kinase YegS;protein_id=WP_135369625.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	12460	13512	.	-	.	ID=gene-C9E97_RS22915;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=C9E97_RS22915;old_locus_tag=C9E97_23450
NZ_PYKA01000137.1	Protein Homology	CDS	12460	13512	.	-	0	ID=cds-WP_000129590.1;Parent=gene-C9E97_RS22915;Dbxref=GenBank:WP_000129590.1;Name=WP_000129590.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=C9E97_RS22915;product=class I fructose-bisphosphate aldolase;protein_id=WP_000129590.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	13766	15037	.	+	.	ID=gene-C9E97_RS22920;Name=C9E97_RS22920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22920;old_locus_tag=C9E97_23455
NZ_PYKA01000137.1	Protein Homology	CDS	13766	15037	.	+	0	ID=cds-WP_135369624.1;Parent=gene-C9E97_RS22920;Dbxref=GenBank:WP_135369624.1;Name=WP_135369624.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461086.1;locus_tag=C9E97_RS22920;product=nucleoside permease;protein_id=WP_135369624.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	15034	16038	.	+	.	ID=gene-C9E97_RS22925;Name=C9E97_RS22925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22925;old_locus_tag=C9E97_23460
NZ_PYKA01000137.1	Protein Homology	CDS	15034	16038	.	+	0	ID=cds-WP_000642793.1;Parent=gene-C9E97_RS22925;Dbxref=GenBank:WP_000642793.1;Name=WP_000642793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461087.1;locus_tag=C9E97_RS22925;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000642793.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	16035	17000	.	+	.	ID=gene-C9E97_RS22930;Name=C9E97_RS22930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22930;old_locus_tag=C9E97_23465
NZ_PYKA01000137.1	Protein Homology	CDS	16035	17000	.	+	0	ID=cds-WP_050067730.1;Parent=gene-C9E97_RS22930;Dbxref=GenBank:WP_050067730.1;Name=WP_050067730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461088.1;locus_tag=C9E97_RS22930;product=PfkB family carbohydrate kinase;protein_id=WP_050067730.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	16974	17720	.	-	.	ID=gene-C9E97_RS22935;Name=C9E97_RS22935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22935;old_locus_tag=C9E97_23470
NZ_PYKA01000137.1	Protein Homology	CDS	16974	17720	.	-	0	ID=cds-WP_135369623.1;Parent=gene-C9E97_RS22935;Dbxref=GenBank:WP_135369623.1;Name=WP_135369623.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461089.1;locus_tag=C9E97_RS22935;product=GntR family transcriptional regulator;protein_id=WP_135369623.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	17756	18556	.	-	.	ID=gene-C9E97_RS22940;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=C9E97_RS22940;old_locus_tag=C9E97_23475
NZ_PYKA01000137.1	Protein Homology	CDS	17756	18556	.	-	0	ID=cds-WP_063809097.1;Parent=gene-C9E97_RS22940;Dbxref=GenBank:WP_063809097.1;Name=WP_063809097.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461090.1;locus_tag=C9E97_RS22940;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_063809097.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	18543	19340	.	-	.	ID=gene-C9E97_RS22945;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=C9E97_RS22945;old_locus_tag=C9E97_23480
NZ_PYKA01000137.1	Protein Homology	CDS	18543	19340	.	-	0	ID=cds-WP_135369622.1;Parent=gene-C9E97_RS22945;Dbxref=GenBank:WP_135369622.1;Name=WP_135369622.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461091.1;locus_tag=C9E97_RS22945;product=hydroxyethylthiazole kinase;protein_id=WP_135369622.1;transl_table=11
NZ_PYKA01000137.1	cmsearch	riboswitch	19372	19468	.	-	.	ID=id-NZ_PYKA01000137.1:19372..19468;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PYKA01000137.1	RefSeq	gene	19750	20064	.	+	.	ID=gene-C9E97_RS22950;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=C9E97_RS22950;old_locus_tag=C9E97_23485
NZ_PYKA01000137.1	Protein Homology	CDS	19750	20064	.	+	0	ID=cds-WP_000837534.1;Parent=gene-C9E97_RS22950;Dbxref=GenBank:WP_000837534.1;Name=WP_000837534.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461092.1;locus_tag=C9E97_RS22950;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WP_000837534.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	20108	21130	.	-	.	ID=gene-C9E97_RS22955;Name=C9E97_RS22955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22955;old_locus_tag=C9E97_23490
NZ_PYKA01000137.1	Protein Homology	CDS	20108	21130	.	-	0	ID=cds-WP_050067733.1;Parent=gene-C9E97_RS22955;Dbxref=GenBank:WP_050067733.1;Name=WP_050067733.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000825913.1;locus_tag=C9E97_RS22955;product=fimbrial protein;protein_id=WP_050067733.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	21146	23632	.	-	.	ID=gene-C9E97_RS22960;Name=C9E97_RS22960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22960;old_locus_tag=C9E97_23495
NZ_PYKA01000137.1	Protein Homology	CDS	21146	23632	.	-	0	ID=cds-WP_023244531.1;Parent=gene-C9E97_RS22960;Dbxref=GenBank:WP_023244531.1;Name=WP_023244531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000413359.1;locus_tag=C9E97_RS22960;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_023244531.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	23661	24341	.	-	.	ID=gene-C9E97_RS22965;Name=C9E97_RS22965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22965;old_locus_tag=C9E97_23500
NZ_PYKA01000137.1	Protein Homology	CDS	23661	24341	.	-	0	ID=cds-WP_000871808.1;Parent=gene-C9E97_RS22965;Dbxref=GenBank:WP_000871808.1;Name=WP_000871808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000871810.1;locus_tag=C9E97_RS22965;product=fimbrial assembly chaperone;protein_id=WP_000871808.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	24403	24936	.	-	.	ID=gene-C9E97_RS22970;Name=yehD;gbkey=Gene;gene=yehD;gene_biotype=protein_coding;locus_tag=C9E97_RS22970;old_locus_tag=C9E97_23505
NZ_PYKA01000137.1	Protein Homology	CDS	24403	24936	.	-	0	ID=cds-WP_000830690.1;Parent=gene-C9E97_RS22970;Dbxref=GenBank:WP_000830690.1;Name=WP_000830690.1;gbkey=CDS;gene=yehD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830679.1;locus_tag=C9E97_RS22970;product=fimbrial protein YehD;protein_id=WP_000830690.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	25215	25496	.	-	.	ID=gene-C9E97_RS22975;Name=C9E97_RS22975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22975;old_locus_tag=C9E97_23510
NZ_PYKA01000137.1	Protein Homology	CDS	25215	25496	.	-	0	ID=cds-WP_135369621.1;Parent=gene-C9E97_RS22975;Dbxref=GenBank:WP_135369621.1;Name=WP_135369621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461097.1;locus_tag=C9E97_RS22975;product=DUF2574 family protein;protein_id=WP_135369621.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	25774	26883	.	-	.	ID=gene-C9E97_RS22980;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=C9E97_RS22980;old_locus_tag=C9E97_23515
NZ_PYKA01000137.1	Protein Homology	CDS	25774	26883	.	-	0	ID=cds-WP_001005424.1;Parent=gene-C9E97_RS22980;Dbxref=GenBank:WP_001005424.1;Name=WP_001005424.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461098.1;locus_tag=C9E97_RS22980;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_001005424.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	27048	29081	.	+	.	ID=gene-C9E97_RS22985;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=C9E97_RS22985;old_locus_tag=C9E97_23520
NZ_PYKA01000137.1	Protein Homology	CDS	27048	29081	.	+	0	ID=cds-WP_000195330.1;Parent=gene-C9E97_RS22985;Dbxref=GenBank:WP_000195330.1;Name=WP_000195330.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461099.1;locus_tag=C9E97_RS22985;product=methionine--tRNA ligase;protein_id=WP_000195330.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	29322	29780	.	+	.	ID=gene-C9E97_RS22990;Name=C9E97_RS22990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22990;old_locus_tag=C9E97_23525
NZ_PYKA01000137.1	Protein Homology	CDS	29322	29780	.	+	0	ID=cds-WP_000703137.1;Parent=gene-C9E97_RS22990;Dbxref=GenBank:WP_000703137.1;Name=WP_000703137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461100.1;locus_tag=C9E97_RS22990;product=YehR family lipoprotein;protein_id=WP_000703137.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	29952	30482	.	+	.	ID=gene-C9E97_RS22995;Name=C9E97_RS22995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22995;old_locus_tag=C9E97_23530
NZ_PYKA01000137.1	Protein Homology	CDS	29952	30482	.	+	0	ID=cds-WP_135369620.1;Parent=gene-C9E97_RS22995;Dbxref=GenBank:WP_135369620.1;Name=WP_135369620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461101.1;locus_tag=C9E97_RS22995;product=YehR family lipoprotein;protein_id=WP_135369620.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	30539	31006	.	-	.	ID=gene-C9E97_RS23000;Name=C9E97_RS23000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23000;old_locus_tag=C9E97_23535
NZ_PYKA01000137.1	Protein Homology	CDS	30539	31006	.	-	0	ID=cds-WP_000950413.1;Parent=gene-C9E97_RS23000;Dbxref=GenBank:WP_000950413.1;Name=WP_000950413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461102.1;locus_tag=C9E97_RS23000;product=DUF1456 family protein;protein_id=WP_000950413.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	31053	31772	.	-	.	ID=gene-C9E97_RS23005;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=C9E97_RS23005;old_locus_tag=C9E97_23540
NZ_PYKA01000137.1	Protein Homology	CDS	31053	31772	.	-	0	ID=cds-WP_000598637.1;Parent=gene-C9E97_RS23005;Dbxref=GenBank:WP_000598637.1;Name=WP_000598637.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461103.1;locus_tag=C9E97_RS23005;product=two-component system response regulator BtsR;protein_id=WP_000598637.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	31769	33454	.	-	.	ID=gene-C9E97_RS23010;Name=C9E97_RS23010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23010;old_locus_tag=C9E97_23545
NZ_PYKA01000137.1	Protein Homology	CDS	31769	33454	.	-	0	ID=cds-WP_000272850.1;Parent=gene-C9E97_RS23010;Dbxref=GenBank:WP_000272850.1;Name=WP_000272850.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461104.1;locus_tag=C9E97_RS23010;product=sensor histidine kinase;protein_id=WP_000272850.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	33677	34408	.	+	.	ID=gene-C9E97_RS23015;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=C9E97_RS23015;old_locus_tag=C9E97_23550
NZ_PYKA01000137.1	Protein Homology	CDS	33677	34408	.	+	0	ID=cds-WP_001240418.1;Parent=gene-C9E97_RS23015;Dbxref=GenBank:WP_001240418.1;Name=WP_001240418.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461105.1;locus_tag=C9E97_RS23015;product=HTH-type transcriptional regulator MlrA;protein_id=WP_001240418.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	34468	34575	.	+	.	ID=gene-C9E97_RS23020;Name=C9E97_RS23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23020;old_locus_tag=C9E97_23555
NZ_PYKA01000137.1	Protein Homology	CDS	34468	34575	.	+	0	ID=cds-WP_001261696.1;Parent=gene-C9E97_RS23020;Dbxref=GenBank:WP_001261696.1;Name=WP_001261696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461106.1;locus_tag=C9E97_RS23020;product=protein YohO;protein_id=WP_001261696.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	34556	35287	.	-	.	ID=gene-C9E97_RS23025;Name=C9E97_RS23025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23025;old_locus_tag=C9E97_23560
NZ_PYKA01000137.1	Protein Homology	CDS	34556	35287	.	-	0	ID=cds-WP_000824854.1;Parent=gene-C9E97_RS23025;Dbxref=GenBank:WP_000824854.1;Name=WP_000824854.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461107.1;locus_tag=C9E97_RS23025;product=ABC transporter permease;protein_id=WP_000824854.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	35271	36218	.	-	.	ID=gene-C9E97_RS23030;Name=C9E97_RS23030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23030;old_locus_tag=C9E97_23565
NZ_PYKA01000137.1	Protein Homology	CDS	35271	36218	.	-	0	ID=cds-WP_000569166.1;Parent=gene-C9E97_RS23030;Dbxref=GenBank:WP_000569166.1;Name=WP_000569166.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461108.1;locus_tag=C9E97_RS23030;product=ABC transporter ATP-binding protein;protein_id=WP_000569166.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	36211	37380	.	-	.	ID=gene-C9E97_RS23035;Name=C9E97_RS23035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23035;old_locus_tag=C9E97_23570
NZ_PYKA01000137.1	Protein Homology	CDS	36211	37380	.	-	0	ID=cds-WP_135369619.1;Parent=gene-C9E97_RS23035;Dbxref=GenBank:WP_135369619.1;Name=WP_135369619.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461109.1;locus_tag=C9E97_RS23035;product=ABC transporter permease;protein_id=WP_135369619.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	37384	38301	.	-	.	ID=gene-C9E97_RS23040;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=C9E97_RS23040;old_locus_tag=C9E97_23575
NZ_PYKA01000137.1	Protein Homology	CDS	37384	38301	.	-	0	ID=cds-WP_000155876.1;Parent=gene-C9E97_RS23040;Dbxref=GenBank:WP_000155876.1;Name=WP_000155876.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461110.1;locus_tag=C9E97_RS23040;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_000155876.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	38482	40779	.	-	.	ID=gene-C9E97_RS23045;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=C9E97_RS23045;old_locus_tag=C9E97_23580
NZ_PYKA01000137.1	Protein Homology	CDS	38482	40779	.	-	0	ID=cds-WP_000871555.1;Parent=gene-C9E97_RS23045;Dbxref=GenBank:WP_000871555.1;Name=WP_000871555.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461111.1;locus_tag=C9E97_RS23045;product=beta-glucosidase BglX;protein_id=WP_000871555.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	41046	42776	.	+	.	ID=gene-C9E97_RS23050;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=C9E97_RS23050;old_locus_tag=C9E97_23585
NZ_PYKA01000137.1	Protein Homology	CDS	41046	42776	.	+	0	ID=cds-WP_135369618.1;Parent=gene-C9E97_RS23050;Dbxref=GenBank:WP_135369618.1;Name=WP_135369618.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461112.1;locus_tag=C9E97_RS23050;product=D-lactate dehydrogenase;protein_id=WP_135369618.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	42835	43782	.	-	.	ID=gene-C9E97_RS23055;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=C9E97_RS23055;old_locus_tag=C9E97_23590
NZ_PYKA01000137.1	Protein Homology	CDS	42835	43782	.	-	0	ID=cds-WP_000911555.1;Parent=gene-C9E97_RS23055;Dbxref=GenBank:WP_000911555.1;Name=WP_000911555.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461113.1;locus_tag=C9E97_RS23055;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_000911555.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	43948	44535	.	-	.	ID=gene-C9E97_RS23060;Name=C9E97_RS23060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23060;old_locus_tag=C9E97_23600
NZ_PYKA01000137.1	Protein Homology	CDS	43948	44535	.	-	0	ID=cds-WP_001017057.1;Parent=gene-C9E97_RS23060;Dbxref=GenBank:WP_001017057.1;Name=WP_001017057.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=C9E97_RS23060;product=Yip1 family protein;protein_id=WP_001017057.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	44694	45263	.	+	.	ID=gene-C9E97_RS23065;Name=C9E97_RS23065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23065;old_locus_tag=C9E97_23605
NZ_PYKA01000137.1	Protein Homology	CDS	44694	45263	.	+	0	ID=cds-WP_001523476.1;Parent=gene-C9E97_RS23065;Dbxref=GenBank:WP_001523476.1;Name=WP_001523476.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669449.1;locus_tag=C9E97_RS23065;product=DedA family protein;protein_id=WP_001523476.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	45311	46072	.	-	.	ID=gene-C9E97_RS23070;Name=C9E97_RS23070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23070;old_locus_tag=C9E97_23610
NZ_PYKA01000137.1	Protein Homology	CDS	45311	46072	.	-	0	ID=cds-WP_000169608.1;Parent=gene-C9E97_RS23070;Dbxref=GenBank:WP_000169608.1;Name=WP_000169608.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461116.1;locus_tag=C9E97_RS23070;product=SDR family oxidoreductase;protein_id=WP_000169608.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	46138	47574	.	-	.	ID=gene-C9E97_RS23075;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=C9E97_RS23075;old_locus_tag=C9E97_23615
NZ_PYKA01000137.1	Protein Homology	CDS	46138	47574	.	-	0	ID=cds-WP_135369617.1;Parent=gene-C9E97_RS23075;Dbxref=GenBank:WP_135369617.1;Name=WP_135369617.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461117.1;locus_tag=C9E97_RS23075;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_135369617.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	47892	47975	.	+	.	ID=gene-C9E97_RS23080;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=C9E97_RS23080;old_locus_tag=C9E97_23620
NZ_PYKA01000137.1	Protein Homology	CDS	47892	47975	.	+	0	ID=cds-WP_000698460.1;Parent=gene-C9E97_RS23080;Dbxref=GenBank:WP_000698460.1;Name=WP_000698460.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=C9E97_RS23080;product=small membrane protein YohP;protein_id=WP_000698460.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	48033	48971	.	-	.	ID=gene-C9E97_RS23085;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=C9E97_RS23085;old_locus_tag=C9E97_23625
NZ_PYKA01000137.1	Protein Homology	CDS	48033	48971	.	-	0	ID=cds-WP_039590605.1;Parent=gene-C9E97_RS23085;Dbxref=GenBank:WP_039590605.1;Name=WP_039590605.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461119.1;locus_tag=C9E97_RS23085;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_039590605.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	49080	50273	.	-	.	ID=gene-C9E97_RS23090;Name=C9E97_RS23090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23090;old_locus_tag=C9E97_23630
NZ_PYKA01000137.1	Protein Homology	CDS	49080	50273	.	-	0	ID=cds-WP_135369080.1;Parent=gene-C9E97_RS23090;Dbxref=GenBank:WP_135369080.1;Name=WP_135369080.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461120.1;locus_tag=C9E97_RS23090;product=3-hydroxybenzoate 6-monooxygenase;protein_id=WP_135369080.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	50288	50932	.	-	.	ID=gene-C9E97_RS23095;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=C9E97_RS23095;old_locus_tag=C9E97_23635
NZ_PYKA01000137.1	Protein Homology	CDS	50288	50932	.	-	0	ID=cds-WP_000781195.1;Parent=gene-C9E97_RS23095;Dbxref=GenBank:WP_000781195.1;Name=WP_000781195.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034,GO:0005737;gbkey=CDS;gene=maiA;go_component=cytoplasm|0005737||IEA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=C9E97_RS23095;product=maleylacetoacetate isomerase;protein_id=WP_000781195.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	50941	51642	.	-	.	ID=gene-C9E97_RS23100;Name=C9E97_RS23100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23100;old_locus_tag=C9E97_23640
NZ_PYKA01000137.1	Protein Homology	CDS	50941	51642	.	-	0	ID=cds-WP_000170620.1;Parent=gene-C9E97_RS23100;Dbxref=GenBank:WP_000170620.1;Name=WP_000170620.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461122.1;locus_tag=C9E97_RS23100;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000170620.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	51658	52695	.	-	.	ID=gene-C9E97_RS23105;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=C9E97_RS23105;old_locus_tag=C9E97_23645
NZ_PYKA01000137.1	Protein Homology	CDS	51658	52695	.	-	0	ID=cds-WP_001289857.1;Parent=gene-C9E97_RS23105;Dbxref=GenBank:WP_001289857.1;Name=WP_001289857.1;Ontology_term=GO:0047922;gbkey=CDS;gene=gtdA;go_function=gentisate 1%2C2-dioxygenase activity|0047922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461123.1;locus_tag=C9E97_RS23105;product=gentisate 1%2C2-dioxygenase;protein_id=WP_001289857.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	52707	54065	.	-	.	ID=gene-C9E97_RS23110;Name=mhbT;gbkey=Gene;gene=mhbT;gene_biotype=protein_coding;locus_tag=C9E97_RS23110;old_locus_tag=C9E97_23650
NZ_PYKA01000137.1	Protein Homology	CDS	52707	54065	.	-	0	ID=cds-WP_000194218.1;Parent=gene-C9E97_RS23110;Dbxref=GenBank:WP_000194218.1;Name=WP_000194218.1;gbkey=CDS;gene=mhbT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461124.1;locus_tag=C9E97_RS23110;product=3-hydroxybenzoate transporter MhbT;protein_id=WP_000194218.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	54191	55099	.	+	.	ID=gene-C9E97_RS23115;Name=C9E97_RS23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23115;old_locus_tag=C9E97_23655
NZ_PYKA01000137.1	Protein Homology	CDS	54191	55099	.	+	0	ID=cds-WP_000024658.1;Parent=gene-C9E97_RS23115;Dbxref=GenBank:WP_000024658.1;Name=WP_000024658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461125.1;locus_tag=C9E97_RS23115;product=LysR substrate-binding domain-containing protein;protein_id=WP_000024658.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	55231	55629	.	+	.	ID=gene-C9E97_RS23120;Name=C9E97_RS23120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23120;old_locus_tag=C9E97_23660
NZ_PYKA01000137.1	Protein Homology	CDS	55231	55629	.	+	0	ID=cds-WP_000045719.1;Parent=gene-C9E97_RS23120;Dbxref=GenBank:WP_000045719.1;Name=WP_000045719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461126.1;locus_tag=C9E97_RS23120;product=CidA/LrgA family protein;protein_id=WP_000045719.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	55626	56321	.	+	.	ID=gene-C9E97_RS23125;Name=C9E97_RS23125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23125;old_locus_tag=C9E97_23665
NZ_PYKA01000137.1	Protein Homology	CDS	55626	56321	.	+	0	ID=cds-WP_000989296.1;Parent=gene-C9E97_RS23125;Dbxref=GenBank:WP_000989296.1;Name=WP_000989296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461127.1;locus_tag=C9E97_RS23125;product=CidB/LrgB family autolysis modulator;protein_id=WP_000989296.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	56475	57359	.	+	.	ID=gene-C9E97_RS23130;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=C9E97_RS23130;old_locus_tag=C9E97_23670
NZ_PYKA01000137.1	Protein Homology	CDS	56475	57359	.	+	0	ID=cds-WP_000553526.1;Parent=gene-C9E97_RS23130;Dbxref=GenBank:WP_000553526.1;Name=WP_000553526.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461128.1;locus_tag=C9E97_RS23130;product=cytidine deaminase;protein_id=WP_000553526.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	57536	58255	.	+	.	ID=gene-C9E97_RS23135;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=C9E97_RS23135;old_locus_tag=C9E97_23675
NZ_PYKA01000137.1	Protein Homology	CDS	57536	58255	.	+	0	ID=cds-WP_000920081.1;Parent=gene-C9E97_RS23135;Dbxref=GenBank:WP_000920081.1;Name=WP_000920081.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461129.1;locus_tag=C9E97_RS23135;product=outer membrane permeability protein SanA;protein_id=WP_000920081.1;transl_table=11
NZ_PYKA01000137.1	RefSeq	gene	58252	58491	.	+	.	ID=gene-C9E97_RS23140;Name=C9E97_RS23140;end_range=58491,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23140;old_locus_tag=C9E97_23680;partial=true
NZ_PYKA01000137.1	Protein Homology	CDS	58252	58491	.	+	0	ID=cds-WP_094538507.1;Parent=gene-C9E97_RS23140;Dbxref=GenBank:WP_094538507.1;Name=WP_094538507.1;end_range=58491,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461130.1;locus_tag=C9E97_RS23140;partial=true;product=DUF2542 family protein;protein_id=WP_094538507.1;transl_table=11
##sequence-region NZ_PYKA01000028.1 1 57923
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000028.1	RefSeq	region	1	57923	.	+	.	ID=NZ_PYKA01000028.1:1..57923;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000028.1	RefSeq	pseudogene	1	140	.	-	.	ID=gene-C9E97_RS03310;Name=C9E97_RS03310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS03310;partial=true;pseudo=true;start_range=.,1
NZ_PYKA01000028.1	Protein Homology	CDS	1	140	.	-	0	ID=cds-C9E97_RS03310;Parent=gene-C9E97_RS03310;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001668046.1;locus_tag=C9E97_RS03310;partial=true;product=aldehyde dehydrogenase family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	197	1189	.	-	.	ID=gene-C9E97_RS03315;Name=C9E97_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03315;old_locus_tag=C9E97_03415
NZ_PYKA01000028.1	Protein Homology	CDS	197	1189	.	-	0	ID=cds-WP_000083414.1;Parent=gene-C9E97_RS03315;Dbxref=GenBank:WP_000083414.1;Name=WP_000083414.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183482.1;locus_tag=C9E97_RS03315;product=transketolase family protein;protein_id=WP_000083414.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	1189	2034	.	-	.	ID=gene-C9E97_RS03320;Name=C9E97_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03320;old_locus_tag=C9E97_03420
NZ_PYKA01000028.1	Protein Homology	CDS	1189	2034	.	-	0	ID=cds-WP_000784292.1;Parent=gene-C9E97_RS03320;Dbxref=GenBank:WP_000784292.1;Name=WP_000784292.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225957.1;locus_tag=C9E97_RS03320;product=transketolase;protein_id=WP_000784292.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	2048	2797	.	-	.	ID=gene-C9E97_RS03325;Name=C9E97_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03325;old_locus_tag=C9E97_03425
NZ_PYKA01000028.1	Protein Homology	CDS	2048	2797	.	-	0	ID=cds-WP_000924697.1;Parent=gene-C9E97_RS03325;Dbxref=GenBank:WP_000924697.1;Name=WP_000924697.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225956.1;locus_tag=C9E97_RS03325;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_000924697.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	2848	4179	.	-	.	ID=gene-C9E97_RS03330;Name=C9E97_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03330;old_locus_tag=C9E97_03430
NZ_PYKA01000028.1	Protein Homology	CDS	2848	4179	.	-	0	ID=cds-WP_001518324.1;Parent=gene-C9E97_RS03330;Dbxref=GenBank:WP_001518324.1;Name=WP_001518324.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225955.1;locus_tag=C9E97_RS03330;product=MFS transporter;protein_id=WP_001518324.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	4518	5441	.	+	.	ID=gene-C9E97_RS03335;Name=C9E97_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03335;old_locus_tag=C9E97_03435
NZ_PYKA01000028.1	Protein Homology	CDS	4518	5441	.	+	0	ID=cds-WP_001075547.1;Parent=gene-C9E97_RS03335;Dbxref=GenBank:WP_001075547.1;Name=WP_001075547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225953.1;locus_tag=C9E97_RS03335;product=LysR substrate-binding domain-containing protein;protein_id=WP_001075547.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	5515	6189	.	+	.	ID=gene-C9E97_RS03340;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=C9E97_RS03340;old_locus_tag=C9E97_03440
NZ_PYKA01000028.1	Protein Homology	CDS	5515	6189	.	+	0	ID=cds-WP_001025254.1;Parent=gene-C9E97_RS03340;Dbxref=GenBank:WP_001025254.1;Name=WP_001025254.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459797.1;locus_tag=C9E97_RS03340;product=transcriptional regulator CecR;protein_id=WP_001025254.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	6189	7184	.	+	.	ID=gene-C9E97_RS03345;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=C9E97_RS03345;old_locus_tag=C9E97_03445
NZ_PYKA01000028.1	Protein Homology	CDS	6189	7184	.	+	0	ID=cds-WP_135369186.1;Parent=gene-C9E97_RS03345;Dbxref=GenBank:WP_135369186.1;Name=WP_135369186.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459796.1;locus_tag=C9E97_RS03345;product=secretion protein HlyD;protein_id=WP_135369186.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	7177	8913	.	+	.	ID=gene-C9E97_RS03350;Name=C9E97_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03350;old_locus_tag=C9E97_03450
NZ_PYKA01000028.1	Protein Homology	CDS	7177	8913	.	+	0	ID=cds-WP_135369187.1;Parent=gene-C9E97_RS03350;Dbxref=GenBank:WP_135369187.1;Name=WP_135369187.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459795.1;locus_tag=C9E97_RS03350;product=ATP-binding cassette domain-containing protein;protein_id=WP_135369187.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	8906	10036	.	+	.	ID=gene-C9E97_RS03355;Name=C9E97_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03355;old_locus_tag=C9E97_03455
NZ_PYKA01000028.1	Protein Homology	CDS	8906	10036	.	+	0	ID=cds-WP_131040198.1;Parent=gene-C9E97_RS03355;Dbxref=GenBank:WP_131040198.1;Name=WP_131040198.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459794.1;locus_tag=C9E97_RS03355;product=ABC transporter permease;protein_id=WP_131040198.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	10136	11242	.	+	.	ID=gene-C9E97_RS03360;Name=C9E97_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03360;old_locus_tag=C9E97_03460
NZ_PYKA01000028.1	Protein Homology	CDS	10136	11242	.	+	0	ID=cds-WP_000469050.1;Parent=gene-C9E97_RS03360;Dbxref=GenBank:WP_000469050.1;Name=WP_000469050.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459793.1;locus_tag=C9E97_RS03360;product=ABC transporter permease;protein_id=WP_000469050.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	11204	11614	.	-	.	ID=gene-C9E97_RS03365;Name=C9E97_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03365;old_locus_tag=C9E97_03465
NZ_PYKA01000028.1	Protein Homology	CDS	11204	11614	.	-	0	ID=cds-WP_000871970.1;Parent=gene-C9E97_RS03365;Dbxref=GenBank:WP_000871970.1;Name=WP_000871970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459792.1;locus_tag=C9E97_RS03365;product=YbhQ family protein;protein_id=WP_000871970.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	11747	12505	.	+	.	ID=gene-C9E97_RS03370;Name=C9E97_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03370;old_locus_tag=C9E97_03470
NZ_PYKA01000028.1	Protein Homology	CDS	11747	12505	.	+	0	ID=cds-WP_000192039.1;Parent=gene-C9E97_RS03370;Dbxref=GenBank:WP_000192039.1;Name=WP_000192039.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459791.1;locus_tag=C9E97_RS03370;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_000192039.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	12502	13743	.	+	.	ID=gene-C9E97_RS03375;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=C9E97_RS03375;old_locus_tag=C9E97_03475
NZ_PYKA01000028.1	Protein Homology	CDS	12502	13743	.	+	0	ID=cds-WP_135369188.1;Parent=gene-C9E97_RS03375;Dbxref=GenBank:WP_135369188.1;Name=WP_135369188.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459790.1;locus_tag=C9E97_RS03375;product=cardiolipin synthase ClsB;protein_id=WP_135369188.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	13743	14705	.	+	.	ID=gene-C9E97_RS03380;Name=C9E97_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03380;old_locus_tag=C9E97_03480
NZ_PYKA01000028.1	Protein Homology	CDS	13743	14705	.	+	0	ID=cds-WP_001129813.1;Parent=gene-C9E97_RS03380;Dbxref=GenBank:WP_001129813.1;Name=WP_001129813.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459789.1;locus_tag=C9E97_RS03380;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;protein_id=WP_001129813.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	14708	15268	.	-	.	ID=gene-C9E97_RS03385;Name=C9E97_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03385;old_locus_tag=C9E97_03485
NZ_PYKA01000028.1	Protein Homology	CDS	14708	15268	.	-	0	ID=cds-WP_001052197.1;Parent=gene-C9E97_RS03385;Dbxref=GenBank:WP_001052197.1;Name=WP_001052197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459788.1;locus_tag=C9E97_RS03385;product=hypothetical protein;protein_id=WP_001052197.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	15276	15884	.	-	.	ID=gene-C9E97_RS03390;Name=C9E97_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03390;old_locus_tag=C9E97_03490
NZ_PYKA01000028.1	Protein Homology	CDS	15276	15884	.	-	0	ID=cds-WP_135369196.1;Parent=gene-C9E97_RS03390;Dbxref=GenBank:WP_135369196.1;Name=WP_135369196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459787.1;locus_tag=C9E97_RS03390;product=hypothetical protein;protein_id=WP_135369196.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	15908	16615	.	-	.	ID=gene-C9E97_RS03395;Name=C9E97_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03395;old_locus_tag=C9E97_03495
NZ_PYKA01000028.1	Protein Homology	CDS	15908	16615	.	-	0	ID=cds-WP_000529062.1;Parent=gene-C9E97_RS03395;Dbxref=GenBank:WP_000529062.1;Name=WP_000529062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459786.1;locus_tag=C9E97_RS03395;product=Bax inhibitor-1 family protein;protein_id=WP_000529062.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	16760	17464	.	-	.	ID=gene-C9E97_RS03400;Name=C9E97_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03400;old_locus_tag=C9E97_03505
NZ_PYKA01000028.1	Protein Homology	CDS	16760	17464	.	-	0	ID=cds-WP_000373612.1;Parent=gene-C9E97_RS03400;Dbxref=GenBank:WP_000373612.1;Name=WP_000373612.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459785.1;locus_tag=C9E97_RS03400;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000373612.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	17512	17964	.	-	.	ID=gene-C9E97_RS03405;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=C9E97_RS03405;old_locus_tag=C9E97_03510
NZ_PYKA01000028.1	Protein Homology	CDS	17512	17964	.	-	0	ID=cds-WP_001209384.1;Parent=gene-C9E97_RS03405;Dbxref=GenBank:WP_001209384.1;Name=WP_001209384.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459784.1;locus_tag=C9E97_RS03405;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_001209384.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	17966	18211	.	-	.	ID=gene-C9E97_RS03410;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=C9E97_RS03410;old_locus_tag=C9E97_03515
NZ_PYKA01000028.1	Protein Homology	CDS	17966	18211	.	-	0	ID=cds-WP_000598596.1;Parent=gene-C9E97_RS03410;Dbxref=GenBank:WP_000598596.1;Name=WP_000598596.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308889.1;locus_tag=C9E97_RS03410;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_000598596.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	18204	18689	.	-	.	ID=gene-C9E97_RS03415;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=C9E97_RS03415;old_locus_tag=C9E97_03520
NZ_PYKA01000028.1	Protein Homology	CDS	18204	18689	.	-	0	ID=cds-WP_000080894.1;Parent=gene-C9E97_RS03415;Dbxref=GenBank:WP_000080894.1;Name=WP_000080894.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459782.1;locus_tag=C9E97_RS03415;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_000080894.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	18692	19204	.	-	.	ID=gene-C9E97_RS03420;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=C9E97_RS03420;old_locus_tag=C9E97_03525
NZ_PYKA01000028.1	Protein Homology	CDS	18692	19204	.	-	0	ID=cds-WP_000084604.1;Parent=gene-C9E97_RS03420;Dbxref=GenBank:WP_000084604.1;Name=WP_000084604.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=C9E97_RS03420;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_000084604.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	19226	20215	.	-	.	ID=gene-C9E97_RS03425;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=C9E97_RS03425;old_locus_tag=C9E97_03530
NZ_PYKA01000028.1	Protein Homology	CDS	19226	20215	.	-	0	ID=cds-WP_000168186.1;Parent=gene-C9E97_RS03425;Dbxref=GenBank:WP_000168186.1;Name=WP_000168186.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459780.1;locus_tag=C9E97_RS03425;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_000168186.1;transl_table=11
NZ_PYKA01000028.1	cmsearch	riboswitch	20203	20347	.	-	.	ID=id-NZ_PYKA01000028.1:20203..20347;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PYKA01000028.1	RefSeq	gene	20612	21520	.	+	.	ID=gene-C9E97_RS03430;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=C9E97_RS03430;old_locus_tag=C9E97_03535
NZ_PYKA01000028.1	Protein Homology	CDS	20612	21520	.	+	0	ID=cds-WP_135369189.1;Parent=gene-C9E97_RS03430;Dbxref=GenBank:WP_135369189.1;Name=WP_135369189.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459779.1;locus_tag=C9E97_RS03430;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_135369189.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	21612	23879	.	-	.	ID=gene-C9E97_RS03435;Name=slrP;gbkey=Gene;gene=slrP;gene_biotype=protein_coding;locus_tag=C9E97_RS03435;old_locus_tag=C9E97_03540
NZ_PYKA01000028.1	Protein Homology	CDS	21612	23879	.	-	0	ID=cds-WP_135369190.1;Parent=gene-C9E97_RS03435;Dbxref=GenBank:WP_135369190.1;Name=WP_135369190.1;gbkey=CDS;gene=slrP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459778.1;locus_tag=C9E97_RS03435;product=SPI-1 type III secretion system effector E3 ubiquitin transferase SlrP;protein_id=WP_135369190.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	pseudogene	23887	24061	.	-	.	ID=gene-C9E97_RS23660;Name=C9E97_RS23660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23660;pseudo=true
NZ_PYKA01000028.1	Protein Homology	CDS	23887	24061	.	-	0	ID=cds-C9E97_RS23660;Parent=gene-C9E97_RS23660;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447236.1;locus_tag=C9E97_RS23660;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	24369	26390	.	-	.	ID=gene-C9E97_RS03440;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=C9E97_RS03440;old_locus_tag=C9E97_03545
NZ_PYKA01000028.1	Protein Homology	CDS	24369	26390	.	-	0	ID=cds-WP_000042502.1;Parent=gene-C9E97_RS03440;Dbxref=GenBank:WP_000042502.1;Name=WP_000042502.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=C9E97_RS03440;product=excinuclease ABC subunit UvrB;protein_id=WP_000042502.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	27041	27727	.	-	.	ID=gene-C9E97_RS03450;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=C9E97_RS03450;old_locus_tag=C9E97_03555
NZ_PYKA01000028.1	Protein Homology	CDS	27041	27727	.	-	0	ID=cds-WP_135369191.1;Parent=gene-C9E97_RS03450;Dbxref=GenBank:WP_135369191.1;Name=WP_135369191.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459775.1;locus_tag=C9E97_RS03450;product=dethiobiotin synthase;protein_id=WP_135369191.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	27720	28475	.	-	.	ID=gene-C9E97_RS03455;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=C9E97_RS03455;old_locus_tag=C9E97_03560
NZ_PYKA01000028.1	Protein Homology	CDS	27720	28475	.	-	0	ID=cds-WP_000079914.1;Parent=gene-C9E97_RS03455;Dbxref=GenBank:WP_000079914.1;Name=WP_000079914.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459774.1;locus_tag=C9E97_RS03455;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_000079914.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	28459	29616	.	-	.	ID=gene-C9E97_RS03460;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=C9E97_RS03460;old_locus_tag=C9E97_03565
NZ_PYKA01000028.1	Protein Homology	CDS	28459	29616	.	-	0	ID=cds-WP_000118943.1;Parent=gene-C9E97_RS03460;Dbxref=GenBank:WP_000118943.1;Name=WP_000118943.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459773.1;locus_tag=C9E97_RS03460;product=8-amino-7-oxononanoate synthase;protein_id=WP_000118943.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	29613	30653	.	-	.	ID=gene-C9E97_RS03465;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=C9E97_RS03465;old_locus_tag=C9E97_03570
NZ_PYKA01000028.1	Protein Homology	CDS	29613	30653	.	-	0	ID=cds-WP_000090727.1;Parent=gene-C9E97_RS03465;Dbxref=GenBank:WP_000090727.1;Name=WP_000090727.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459772.1;locus_tag=C9E97_RS03465;product=biotin synthase BioB;protein_id=WP_000090727.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	30740	32029	.	+	.	ID=gene-C9E97_RS03470;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=C9E97_RS03470;old_locus_tag=C9E97_03575
NZ_PYKA01000028.1	Protein Homology	CDS	30740	32029	.	+	0	ID=cds-WP_000205519.1;Parent=gene-C9E97_RS03470;Dbxref=GenBank:WP_000205519.1;Name=WP_000205519.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459771.1;locus_tag=C9E97_RS03470;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_000205519.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	32087	32563	.	+	.	ID=gene-C9E97_RS03475;Name=C9E97_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03475;old_locus_tag=C9E97_03580
NZ_PYKA01000028.1	Protein Homology	CDS	32087	32563	.	+	0	ID=cds-WP_000767403.1;Parent=gene-C9E97_RS03475;Dbxref=GenBank:WP_000767403.1;Name=WP_000767403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459770.1;locus_tag=C9E97_RS03475;product=kinase inhibitor;protein_id=WP_000767403.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	32648	34168	.	-	.	ID=gene-C9E97_RS03480;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=C9E97_RS03480;old_locus_tag=C9E97_03585
NZ_PYKA01000028.1	Protein Homology	CDS	32648	34168	.	-	0	ID=cds-WP_135369193.1;Parent=gene-C9E97_RS03480;Dbxref=GenBank:WP_135369193.1;Name=WP_135369193.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459769.1;locus_tag=C9E97_RS03480;product=histidine ammonia-lyase;protein_id=WP_135369193.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	34170	35855	.	-	.	ID=gene-C9E97_RS03485;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=C9E97_RS03485;old_locus_tag=C9E97_03590
NZ_PYKA01000028.1	Protein Homology	CDS	34170	35855	.	-	0	ID=cds-WP_001115217.1;Parent=gene-C9E97_RS03485;Dbxref=GenBank:WP_001115217.1;Name=WP_001115217.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441920.1;locus_tag=C9E97_RS03485;product=urocanate hydratase;protein_id=WP_001115217.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	36052	36777	.	-	.	ID=gene-C9E97_RS03490;Name=C9E97_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03490;old_locus_tag=C9E97_03595
NZ_PYKA01000028.1	Protein Homology	CDS	36052	36777	.	-	0	ID=cds-WP_000287413.1;Parent=gene-C9E97_RS03490;Dbxref=GenBank:WP_000287413.1;Name=WP_000287413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459768.1;locus_tag=C9E97_RS03490;product=histidine utilization repressor;protein_id=WP_000287413.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	36822	37763	.	-	.	ID=gene-C9E97_RS03495;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=C9E97_RS03495;old_locus_tag=C9E97_03600
NZ_PYKA01000028.1	Protein Homology	CDS	36822	37763	.	-	0	ID=cds-WP_000195688.1;Parent=gene-C9E97_RS03495;Dbxref=GenBank:WP_000195688.1;Name=WP_000195688.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459767.1;locus_tag=C9E97_RS03495;product=formimidoylglutamase;protein_id=WP_000195688.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	37760	38983	.	-	.	ID=gene-C9E97_RS03500;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=C9E97_RS03500;old_locus_tag=C9E97_03605
NZ_PYKA01000028.1	Protein Homology	CDS	37760	38983	.	-	0	ID=cds-WP_135369197.1;Parent=gene-C9E97_RS03500;Dbxref=GenBank:WP_135369197.1;Name=WP_135369197.1;Ontology_term=GO:0019556,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459766.1;locus_tag=C9E97_RS03500;product=imidazolonepropionase;protein_id=WP_135369197.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	39221	40504	.	+	.	ID=gene-C9E97_RS03505;Name=C9E97_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03505;old_locus_tag=C9E97_03610
NZ_PYKA01000028.1	Protein Homology	CDS	39221	40504	.	+	0	ID=cds-WP_001094776.1;Parent=gene-C9E97_RS03505;Dbxref=GenBank:WP_001094776.1;Name=WP_001094776.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459765.1;locus_tag=C9E97_RS03505;product=putative acyl-CoA thioester hydrolase;protein_id=WP_001094776.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	40648	41643	.	-	.	ID=gene-C9E97_RS03510;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;gene_synonym=ybhE;locus_tag=C9E97_RS03510;old_locus_tag=C9E97_03615
NZ_PYKA01000028.1	Protein Homology	CDS	40648	41643	.	-	0	ID=cds-WP_000815468.1;Parent=gene-C9E97_RS03510;Dbxref=GenBank:WP_000815468.1;Name=WP_000815468.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459764.1;locus_tag=C9E97_RS03510;product=6-phosphogluconolactonase;protein_id=WP_000815468.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	41807	42625	.	+	.	ID=gene-C9E97_RS03515;Name=C9E97_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03515;old_locus_tag=C9E97_03620
NZ_PYKA01000028.1	Protein Homology	CDS	41807	42625	.	+	0	ID=cds-WP_001748281.1;Parent=gene-C9E97_RS03515;Dbxref=GenBank:WP_001748281.1;Name=WP_001748281.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459763.1;locus_tag=C9E97_RS03515;product=pyridoxal phosphatase;protein_id=WP_001748281.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	42626	43684	.	-	.	ID=gene-C9E97_RS03520;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=C9E97_RS03520;old_locus_tag=C9E97_03625
NZ_PYKA01000028.1	Protein Homology	CDS	42626	43684	.	-	0	ID=cds-WP_000891710.1;Parent=gene-C9E97_RS03520;Dbxref=GenBank:WP_000891710.1;Name=WP_000891710.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459762.1;locus_tag=C9E97_RS03520;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_000891710.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	43687	44376	.	-	.	ID=gene-C9E97_RS03525;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=C9E97_RS03525;old_locus_tag=C9E97_03630
NZ_PYKA01000028.1	Protein Homology	CDS	43687	44376	.	-	0	ID=cds-WP_000604026.1;Parent=gene-C9E97_RS03525;Dbxref=GenBank:WP_000604026.1;Name=WP_000604026.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459761.1;locus_tag=C9E97_RS03525;product=molybdate ABC transporter permease subunit;protein_id=WP_000604026.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	44376	45149	.	-	.	ID=gene-C9E97_RS03530;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=C9E97_RS03530;old_locus_tag=C9E97_03635
NZ_PYKA01000028.1	Protein Homology	CDS	44376	45149	.	-	0	ID=cds-WP_000951416.1;Parent=gene-C9E97_RS03530;Dbxref=GenBank:WP_000951416.1;Name=WP_000951416.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459760.1;locus_tag=C9E97_RS03530;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_000951416.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	45316	45465	.	-	.	ID=gene-C9E97_RS03535;Name=C9E97_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03535;old_locus_tag=C9E97_03640
NZ_PYKA01000028.1	Protein Homology	CDS	45316	45465	.	-	0	ID=cds-WP_000891513.1;Parent=gene-C9E97_RS03535;Dbxref=GenBank:WP_000891513.1;Name=WP_000891513.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459759.1;locus_tag=C9E97_RS03535;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WP_000891513.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	45594	46382	.	+	.	ID=gene-C9E97_RS03540;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=C9E97_RS03540;old_locus_tag=C9E97_03645
NZ_PYKA01000028.1	Protein Homology	CDS	45594	46382	.	+	0	ID=cds-WP_001147416.1;Parent=gene-C9E97_RS03540;Dbxref=GenBank:WP_001147416.1;Name=WP_001147416.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459758.1;locus_tag=C9E97_RS03540;product=molybdenum-dependent transcriptional regulator;protein_id=WP_001147416.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	46450	47925	.	+	.	ID=gene-C9E97_RS03545;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=C9E97_RS03545;old_locus_tag=C9E97_03650
NZ_PYKA01000028.1	Protein Homology	CDS	46450	47925	.	+	0	ID=cds-WP_020839470.1;Parent=gene-C9E97_RS03545;Dbxref=GenBank:WP_020839470.1;Name=WP_020839470.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459757.1;locus_tag=C9E97_RS03545;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_020839470.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	48096	49004	.	+	.	ID=gene-C9E97_RS03550;Name=C9E97_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03550;old_locus_tag=C9E97_03655
NZ_PYKA01000028.1	Protein Homology	CDS	48096	49004	.	+	0	ID=cds-WP_135369194.1;Parent=gene-C9E97_RS03550;Dbxref=GenBank:WP_135369194.1;Name=WP_135369194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459756.1;locus_tag=C9E97_RS03550;product=DUF2167 domain-containing protein;protein_id=WP_135369194.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	49227	50243	.	+	.	ID=gene-C9E97_RS03555;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=C9E97_RS03555;old_locus_tag=C9E97_03660
NZ_PYKA01000028.1	Protein Homology	CDS	49227	50243	.	+	0	ID=cds-WP_001265465.1;Parent=gene-C9E97_RS03555;Dbxref=GenBank:WP_001265465.1;Name=WP_001265465.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459755.1;locus_tag=C9E97_RS03555;product=UDP-glucose 4-epimerase GalE;protein_id=WP_001265465.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	50254	51300	.	+	.	ID=gene-C9E97_RS03560;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=C9E97_RS03560;old_locus_tag=C9E97_03665
NZ_PYKA01000028.1	Protein Homology	CDS	50254	51300	.	+	0	ID=cds-WP_000187471.1;Parent=gene-C9E97_RS03560;Dbxref=GenBank:WP_000187471.1;Name=WP_000187471.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459754.1;locus_tag=C9E97_RS03560;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_000187471.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	51303	52451	.	+	.	ID=gene-C9E97_RS03565;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=C9E97_RS03565;old_locus_tag=C9E97_03670
NZ_PYKA01000028.1	Protein Homology	CDS	51303	52451	.	+	0	ID=cds-WP_023221278.1;Parent=gene-C9E97_RS03565;Dbxref=GenBank:WP_023221278.1;Name=WP_023221278.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=C9E97_RS03565;product=galactokinase;protein_id=WP_023221278.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	52445	53485	.	+	.	ID=gene-C9E97_RS03570;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=C9E97_RS03570;old_locus_tag=C9E97_03675
NZ_PYKA01000028.1	Protein Homology	CDS	52445	53485	.	+	0	ID=cds-WP_135369195.1;Parent=gene-C9E97_RS03570;Dbxref=GenBank:WP_135369195.1;Name=WP_135369195.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459752.1;locus_tag=C9E97_RS03570;product=galactose-1-epimerase;protein_id=WP_135369195.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	53709	54461	.	+	.	ID=gene-C9E97_RS03575;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=C9E97_RS03575;old_locus_tag=C9E97_03685
NZ_PYKA01000028.1	Protein Homology	CDS	53709	54461	.	+	0	ID=cds-WP_000301556.1;Parent=gene-C9E97_RS03575;Dbxref=GenBank:WP_000301556.1;Name=WP_000301556.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=C9E97_RS03575;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_000301556.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	54552	55328	.	-	.	ID=gene-C9E97_RS03580;Name=C9E97_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03580;old_locus_tag=C9E97_03690
NZ_PYKA01000028.1	Protein Homology	CDS	54552	55328	.	-	0	ID=cds-WP_001214709.1;Parent=gene-C9E97_RS03580;Dbxref=GenBank:WP_001214709.1;Name=WP_001214709.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459750.1;locus_tag=C9E97_RS03580;product=ABC transporter ATP-binding protein;protein_id=WP_001214709.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	55328	56407	.	-	.	ID=gene-C9E97_RS03585;Name=C9E97_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03585;old_locus_tag=C9E97_03695
NZ_PYKA01000028.1	Protein Homology	CDS	55328	56407	.	-	0	ID=cds-WP_079942541.1;Parent=gene-C9E97_RS03585;Dbxref=GenBank:WP_079942541.1;Name=WP_079942541.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459749.1;locus_tag=C9E97_RS03585;product=FecCD family ABC transporter permease;protein_id=WP_079942541.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	56787	57485	.	-	.	ID=gene-C9E97_RS03590;Name=C9E97_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03590;old_locus_tag=C9E97_03700
NZ_PYKA01000028.1	Protein Homology	CDS	56787	57485	.	-	0	ID=cds-WP_001005988.1;Parent=gene-C9E97_RS03590;Dbxref=GenBank:WP_001005988.1;Name=WP_001005988.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459748.1;locus_tag=C9E97_RS03590;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_001005988.1;transl_table=11
NZ_PYKA01000028.1	RefSeq	gene	57604	57923	.	-	.	ID=gene-C9E97_RS03595;Name=C9E97_RS03595;end_range=57923,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03595;old_locus_tag=C9E97_03705;partial=true
NZ_PYKA01000028.1	Protein Homology	CDS	57604	57923	.	-	2	ID=cds-WP_072210623.1-2;Parent=gene-C9E97_RS03595;Dbxref=GenBank:WP_072210623.1;Name=WP_072210623.1;Ontology_term=GO:0006814,GO:0016829;end_range=57923,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=C9E97_RS03595;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_072210623.1;transl_table=11
##sequence-region NZ_PYKA01000023.1 1 57687
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000023.1	RefSeq	region	1	57687	.	+	.	ID=NZ_PYKA01000023.1:1..57687;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000023.1	RefSeq	gene	16	1179	.	+	.	ID=gene-C9E97_RS02680;Name=C9E97_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02680;old_locus_tag=C9E97_02765
NZ_PYKA01000023.1	Protein Homology	CDS	16	1179	.	+	0	ID=cds-WP_135419959.1;Parent=gene-C9E97_RS02680;Dbxref=GenBank:WP_135419959.1;Name=WP_135419959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463274.1;locus_tag=C9E97_RS02680;product=metallo-dependent hydrolase;protein_id=WP_135419959.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	1176	2384	.	+	.	ID=gene-C9E97_RS02685;Name=C9E97_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02685;old_locus_tag=C9E97_02770
NZ_PYKA01000023.1	Protein Homology	CDS	1176	2384	.	+	0	ID=cds-WP_000200803.1;Parent=gene-C9E97_RS02685;Dbxref=GenBank:WP_000200803.1;Name=WP_000200803.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463273.1;locus_tag=C9E97_RS02685;product=MFS transporter;protein_id=WP_000200803.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	2438	2782	.	-	.	ID=gene-C9E97_RS02690;Name=C9E97_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02690;old_locus_tag=C9E97_02775
NZ_PYKA01000023.1	Protein Homology	CDS	2438	2782	.	-	0	ID=cds-WP_001219167.1;Parent=gene-C9E97_RS02690;Dbxref=GenBank:WP_001219167.1;Name=WP_001219167.1;Ontology_term=GO:0061929;gbkey=CDS;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463272.1;locus_tag=C9E97_RS02690;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_001219167.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	2785	6564	.	-	.	ID=gene-C9E97_RS02695;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=C9E97_RS02695;old_locus_tag=C9E97_02780
NZ_PYKA01000023.1	Protein Homology	CDS	2785	6564	.	-	0	ID=cds-WP_135369333.1;Parent=gene-C9E97_RS02695;Dbxref=GenBank:WP_135369333.1;Name=WP_135369333.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=C9E97_RS02695;product=autotransporter assembly complex protein TamB;protein_id=WP_135369333.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	6561	8294	.	-	.	ID=gene-C9E97_RS02700;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=C9E97_RS02700;old_locus_tag=C9E97_02785
NZ_PYKA01000023.1	Protein Homology	CDS	6561	8294	.	-	0	ID=cds-WP_001120237.1;Parent=gene-C9E97_RS02700;Dbxref=GenBank:WP_001120237.1;Name=WP_001120237.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463270.1;locus_tag=C9E97_RS02700;product=autotransporter assembly complex protein TamA;protein_id=WP_001120237.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	8507	9145	.	+	.	ID=gene-C9E97_RS02705;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=C9E97_RS02705;old_locus_tag=C9E97_02790
NZ_PYKA01000023.1	Protein Homology	CDS	8507	9145	.	+	0	ID=cds-WP_000051467.1;Parent=gene-C9E97_RS02705;Dbxref=GenBank:WP_000051467.1;Name=WP_000051467.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463269.1;locus_tag=C9E97_RS02705;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_000051467.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	9328	10671	.	+	.	ID=gene-C9E97_RS02710;Name=C9E97_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02710;old_locus_tag=C9E97_02795
NZ_PYKA01000023.1	Protein Homology	CDS	9328	10671	.	+	0	ID=cds-WP_000934972.1;Parent=gene-C9E97_RS02710;Dbxref=GenBank:WP_000934972.1;Name=WP_000934972.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463268.1;locus_tag=C9E97_RS02710;product=hemolysin family protein;protein_id=WP_000934972.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	10756	10962	.	-	.	ID=gene-C9E97_RS02715;Name=C9E97_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02715;old_locus_tag=C9E97_02800
NZ_PYKA01000023.1	Protein Homology	CDS	10756	10962	.	-	0	ID=cds-WP_000689229.1;Parent=gene-C9E97_RS02715;Dbxref=GenBank:WP_000689229.1;Name=WP_000689229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=C9E97_RS02715;product=DUF1107 domain-containing protein;protein_id=WP_000689229.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	11289	11846	.	+	.	ID=gene-C9E97_RS02725;Name=C9E97_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02725;old_locus_tag=C9E97_02810
NZ_PYKA01000023.1	Protein Homology	CDS	11289	11846	.	+	0	ID=cds-WP_000175301.1;Parent=gene-C9E97_RS02725;Dbxref=GenBank:WP_000175301.1;Name=WP_000175301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463266.1;locus_tag=C9E97_RS02725;product=YtfJ family protein;protein_id=WP_000175301.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	11836	12576	.	-	.	ID=gene-C9E97_RS02730;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=C9E97_RS02730;old_locus_tag=C9E97_02815
NZ_PYKA01000023.1	Protein Homology	CDS	11836	12576	.	-	0	ID=cds-WP_000893398.1;Parent=gene-C9E97_RS02730;Dbxref=GenBank:WP_000893398.1;Name=WP_000893398.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=C9E97_RS02730;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000893398.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	12844	14787	.	+	.	ID=gene-C9E97_RS02740;Name=C9E97_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02740;old_locus_tag=C9E97_02825
NZ_PYKA01000023.1	Protein Homology	CDS	12844	14787	.	+	0	ID=cds-WP_135369331.1;Parent=gene-C9E97_RS02740;Dbxref=GenBank:WP_135369331.1;Name=WP_135369331.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463264.1;locus_tag=C9E97_RS02740;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_135369331.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	14845	15231	.	-	.	ID=gene-C9E97_RS02745;Name=C9E97_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02745;old_locus_tag=C9E97_02830
NZ_PYKA01000023.1	Protein Homology	CDS	14845	15231	.	-	0	ID=cds-WP_001201297.1;Parent=gene-C9E97_RS02745;Dbxref=GenBank:WP_001201297.1;Name=WP_001201297.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463263.1;locus_tag=C9E97_RS02745;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_001201297.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	15319	16167	.	+	.	ID=gene-C9E97_RS02750;Name=C9E97_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02750;old_locus_tag=C9E97_02835
NZ_PYKA01000023.1	Protein Homology	CDS	15319	16167	.	+	0	ID=cds-WP_000560620.1;Parent=gene-C9E97_RS02750;Dbxref=GenBank:WP_000560620.1;Name=WP_000560620.1;Ontology_term=GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463262.1;locus_tag=C9E97_RS02750;product=SDR family oxidoreductase;protein_id=WP_000560620.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	16248	17213	.	+	.	ID=gene-C9E97_RS02755;Name=C9E97_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02755;old_locus_tag=C9E97_02840
NZ_PYKA01000023.1	Protein Homology	CDS	16248	17213	.	+	0	ID=cds-WP_135369330.1;Parent=gene-C9E97_RS02755;Dbxref=GenBank:WP_135369330.1;Name=WP_135369330.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463261.1;locus_tag=C9E97_RS02755;product=DMT family transporter;protein_id=WP_135369330.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	17316	17978	.	+	.	ID=gene-C9E97_RS02760;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=C9E97_RS02760;old_locus_tag=C9E97_02845
NZ_PYKA01000023.1	Protein Homology	CDS	17316	17978	.	+	0	ID=cds-WP_000331471.1;Parent=gene-C9E97_RS02760;Dbxref=GenBank:WP_000331471.1;Name=WP_000331471.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463260.1;locus_tag=C9E97_RS02760;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_000331471.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	18090	19499	.	-	.	ID=gene-C9E97_RS02765;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=C9E97_RS02765;old_locus_tag=C9E97_02850
NZ_PYKA01000023.1	Protein Homology	CDS	18090	19499	.	-	0	ID=cds-WP_000228322.1;Parent=gene-C9E97_RS02765;Dbxref=GenBank:WP_000228322.1;Name=WP_000228322.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463259.1;locus_tag=C9E97_RS02765;product=D-serine/D-alanine/glycine transporter;protein_id=WP_000228322.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	19795	20415	.	-	.	ID=gene-C9E97_RS02770;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=C9E97_RS02770;old_locus_tag=C9E97_02855
NZ_PYKA01000023.1	Protein Homology	CDS	19795	20415	.	-	0	ID=cds-WP_000235161.1;Parent=gene-C9E97_RS02770;Dbxref=GenBank:WP_000235161.1;Name=WP_000235161.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=C9E97_RS02770;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000235161.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	20635	21270	.	+	.	ID=gene-C9E97_RS02775;Name=C9E97_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02775;old_locus_tag=C9E97_02865
NZ_PYKA01000023.1	Protein Homology	CDS	20635	21270	.	+	0	ID=cds-WP_001119446.1;Parent=gene-C9E97_RS02775;Dbxref=GenBank:WP_001119446.1;Name=WP_001119446.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463257.1;locus_tag=C9E97_RS02775;product=OapA family protein;protein_id=WP_001119446.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	21320	22246	.	-	.	ID=gene-C9E97_RS02780;Name=C9E97_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02780;old_locus_tag=C9E97_02870
NZ_PYKA01000023.1	Protein Homology	CDS	21320	22246	.	-	0	ID=cds-WP_135369329.1;Parent=gene-C9E97_RS02780;Dbxref=GenBank:WP_135369329.1;Name=WP_135369329.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463256.1;locus_tag=C9E97_RS02780;product=DMT family transporter;protein_id=WP_135369329.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	22394	22843	.	-	.	ID=gene-C9E97_RS02785;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=C9E97_RS02785;old_locus_tag=C9E97_02875
NZ_PYKA01000023.1	Protein Homology	CDS	22394	22843	.	-	0	ID=cds-WP_001196059.1;Parent=gene-C9E97_RS02785;Dbxref=GenBank:WP_001196059.1;Name=WP_001196059.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=C9E97_RS02785;product=50S ribosomal protein L9;protein_id=WP_001196059.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	22885	23112	.	-	.	ID=gene-C9E97_RS02790;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=C9E97_RS02790;old_locus_tag=C9E97_02880
NZ_PYKA01000023.1	Protein Homology	CDS	22885	23112	.	-	0	ID=cds-WP_000135199.1;Parent=gene-C9E97_RS02790;Dbxref=GenBank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=C9E97_RS02790;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	23117	23431	.	-	.	ID=gene-C9E97_RS02795;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=C9E97_RS02795;old_locus_tag=C9E97_02885
NZ_PYKA01000023.1	Protein Homology	CDS	23117	23431	.	-	0	ID=cds-WP_001519453.1;Parent=gene-C9E97_RS02795;Dbxref=GenBank:WP_001519453.1;Name=WP_001519453.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463253.1;locus_tag=C9E97_RS02795;product=primosomal replication protein N;protein_id=WP_001519453.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	23438	23833	.	-	.	ID=gene-C9E97_RS02800;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=C9E97_RS02800;old_locus_tag=C9E97_02890
NZ_PYKA01000023.1	Protein Homology	CDS	23438	23833	.	-	0	ID=cds-WP_001216673.1;Parent=gene-C9E97_RS02800;Dbxref=GenBank:WP_001216673.1;Name=WP_001216673.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=C9E97_RS02800;product=30S ribosomal protein S6;protein_id=WP_001216673.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	24220	24495	.	+	.	ID=gene-C9E97_RS02805;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=C9E97_RS02805;old_locus_tag=C9E97_02895
NZ_PYKA01000023.1	Protein Homology	CDS	24220	24495	.	+	0	ID=cds-WP_000466074.1;Parent=gene-C9E97_RS02805;Dbxref=GenBank:WP_000466074.1;Name=WP_000466074.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313202.1;locus_tag=C9E97_RS02805;product=DUF1471 family protein YjfY;protein_id=WP_000466074.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	24549	25106	.	-	.	ID=gene-C9E97_RS02810;Name=C9E97_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02810;old_locus_tag=C9E97_02900
NZ_PYKA01000023.1	Protein Homology	CDS	24549	25106	.	-	0	ID=cds-WP_000026294.1;Parent=gene-C9E97_RS02810;Dbxref=GenBank:WP_000026294.1;Name=WP_000026294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006911310.1;locus_tag=C9E97_RS02810;product=YagU family protein;protein_id=WP_000026294.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	25194	25880	.	-	.	ID=gene-C9E97_RS02815;Name=C9E97_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02815;old_locus_tag=C9E97_02905
NZ_PYKA01000023.1	Protein Homology	CDS	25194	25880	.	-	0	ID=cds-WP_001170771.1;Parent=gene-C9E97_RS02815;Dbxref=GenBank:WP_001170771.1;Name=WP_001170771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463249.1;locus_tag=C9E97_RS02815;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_001170771.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	25880	26734	.	-	.	ID=gene-C9E97_RS02820;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=C9E97_RS02820;old_locus_tag=C9E97_02910
NZ_PYKA01000023.1	Protein Homology	CDS	25880	26734	.	-	0	ID=cds-WP_000949531.1;Parent=gene-C9E97_RS02820;Dbxref=GenBank:WP_000949531.1;Name=WP_000949531.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463248.1;locus_tag=C9E97_RS02820;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WP_000949531.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	26744	27394	.	-	.	ID=gene-C9E97_RS02825;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=C9E97_RS02825;old_locus_tag=C9E97_02915
NZ_PYKA01000023.1	Protein Homology	CDS	26744	27394	.	-	0	ID=cds-WP_000056761.1;Parent=gene-C9E97_RS02825;Dbxref=GenBank:WP_000056761.1;Name=WP_000056761.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463247.1;locus_tag=C9E97_RS02825;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000056761.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	27408	27872	.	-	.	ID=gene-C9E97_RS02830;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=C9E97_RS02830;old_locus_tag=C9E97_02920
NZ_PYKA01000023.1	Protein Homology	CDS	27408	27872	.	-	0	ID=cds-WP_000776531.1;Parent=gene-C9E97_RS02830;Dbxref=GenBank:WP_000776531.1;Name=WP_000776531.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463246.1;locus_tag=C9E97_RS02830;product=PTS ascorbate transporter subunit IIA;protein_id=WP_000776531.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	27882	28187	.	-	.	ID=gene-C9E97_RS02835;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=C9E97_RS02835;old_locus_tag=C9E97_02925
NZ_PYKA01000023.1	Protein Homology	CDS	27882	28187	.	-	0	ID=cds-WP_000218358.1;Parent=gene-C9E97_RS02835;Dbxref=GenBank:WP_000218358.1;Name=WP_000218358.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463245.1;locus_tag=C9E97_RS02835;product=PTS ascorbate transporter subunit IIB;protein_id=WP_000218358.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	28203	29600	.	-	.	ID=gene-C9E97_RS02840;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=C9E97_RS02840;old_locus_tag=C9E97_02930
NZ_PYKA01000023.1	Protein Homology	CDS	28203	29600	.	-	0	ID=cds-WP_000404873.1;Parent=gene-C9E97_RS02840;Dbxref=GenBank:WP_000404873.1;Name=WP_000404873.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=C9E97_RS02840;product=PTS ascorbate transporter subunit IIC;protein_id=WP_000404873.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	29963	31027	.	+	.	ID=gene-C9E97_RS02845;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=C9E97_RS02845;old_locus_tag=C9E97_02935
NZ_PYKA01000023.1	Protein Homology	CDS	29963	31027	.	+	0	ID=cds-WP_000049161.1;Parent=gene-C9E97_RS02845;Dbxref=GenBank:WP_000049161.1;Name=WP_000049161.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=C9E97_RS02845;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_000049161.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	31132	31887	.	+	.	ID=gene-C9E97_RS02850;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=C9E97_RS02850;old_locus_tag=C9E97_02940
NZ_PYKA01000023.1	Protein Homology	CDS	31132	31887	.	+	0	ID=cds-WP_000133618.1;Parent=gene-C9E97_RS02850;Dbxref=GenBank:WP_000133618.1;Name=WP_000133618.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463242.1;locus_tag=C9E97_RS02850;product=HTH-type transcriptional regulator UlaR;protein_id=WP_000133618.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	31884	32633	.	-	.	ID=gene-C9E97_RS02855;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=C9E97_RS02855;old_locus_tag=C9E97_02945
NZ_PYKA01000023.1	Protein Homology	CDS	31884	32633	.	-	0	ID=cds-WP_000560306.1;Parent=gene-C9E97_RS02855;Dbxref=GenBank:WP_000560306.1;Name=WP_000560306.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463241.1;locus_tag=C9E97_RS02855;product=esterase;protein_id=WP_000560306.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	32817	33146	.	+	.	ID=gene-C9E97_RS02860;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=C9E97_RS02860;old_locus_tag=C9E97_02950
NZ_PYKA01000023.1	Protein Homology	CDS	32817	33146	.	+	0	ID=cds-WP_000586835.1;Parent=gene-C9E97_RS02860;Dbxref=GenBank:WP_000586835.1;Name=WP_000586835.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463240.1;locus_tag=C9E97_RS02860;product=biofilm peroxide resistance protein BsmA;protein_id=WP_000586835.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	33277	33552	.	+	.	ID=gene-C9E97_RS02865;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=C9E97_RS02865;old_locus_tag=C9E97_02955
NZ_PYKA01000023.1	Protein Homology	CDS	33277	33552	.	+	0	ID=cds-WP_146713342.1;Parent=gene-C9E97_RS02865;Dbxref=GenBank:WP_146713342.1;Name=WP_146713342.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134428.1;locus_tag=C9E97_RS02865;product=DUF1471 family protease activator YjfN;protein_id=WP_146713342.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	33597	35219	.	-	.	ID=gene-C9E97_RS02870;Name=C9E97_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02870;old_locus_tag=C9E97_02960
NZ_PYKA01000023.1	Protein Homology	CDS	33597	35219	.	-	0	ID=cds-WP_061383260.1;Parent=gene-C9E97_RS02870;Dbxref=GenBank:WP_061383260.1;Name=WP_061383260.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463238.3;locus_tag=C9E97_RS02870;product=isovaleryl-CoA dehydrogenase;protein_id=WP_061383260.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	35304	36467	.	-	.	ID=gene-C9E97_RS02875;Name=C9E97_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02875;old_locus_tag=C9E97_02965
NZ_PYKA01000023.1	Protein Homology	CDS	35304	36467	.	-	0	ID=cds-WP_000943930.1;Parent=gene-C9E97_RS02875;Dbxref=GenBank:WP_000943930.1;Name=WP_000943930.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463237.1;locus_tag=C9E97_RS02875;product=glutathionylspermidine synthase family protein;protein_id=WP_000943930.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	36470	37108	.	-	.	ID=gene-C9E97_RS02880;Name=C9E97_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02880;old_locus_tag=C9E97_02970
NZ_PYKA01000023.1	Protein Homology	CDS	36470	37108	.	-	0	ID=cds-WP_001085596.1;Parent=gene-C9E97_RS02880;Dbxref=GenBank:WP_001085596.1;Name=WP_001085596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463236.1;locus_tag=C9E97_RS02880;product=DUF1190 domain-containing protein;protein_id=WP_001085596.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	37118	37516	.	-	.	ID=gene-C9E97_RS02885;Name=C9E97_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02885;old_locus_tag=C9E97_02975
NZ_PYKA01000023.1	Protein Homology	CDS	37118	37516	.	-	0	ID=cds-WP_000547737.1;Parent=gene-C9E97_RS02885;Dbxref=GenBank:WP_000547737.1;Name=WP_000547737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463235.1;locus_tag=C9E97_RS02885;product=DUF350 domain-containing protein;protein_id=WP_000547737.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	37534	38217	.	-	.	ID=gene-C9E97_RS02890;Name=C9E97_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02890;old_locus_tag=C9E97_02980
NZ_PYKA01000023.1	Protein Homology	CDS	37534	38217	.	-	0	ID=cds-WP_000090290.1;Parent=gene-C9E97_RS02890;Dbxref=GenBank:WP_000090290.1;Name=WP_000090290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463234.3;locus_tag=C9E97_RS02890;product=YjfK family protein;protein_id=WP_000090290.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	38190	39260	.	-	.	ID=gene-C9E97_RS02895;Name=C9E97_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02895;old_locus_tag=C9E97_02985
NZ_PYKA01000023.1	Protein Homology	CDS	38190	39260	.	-	0	ID=cds-WP_000899674.1;Parent=gene-C9E97_RS02895;Dbxref=GenBank:WP_000899674.1;Name=WP_000899674.1;Ontology_term=GO:0034220,GO:0071805,GO:0005216,GO:0005267,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic ion channel activity|0005216||IEA,potassium channel activity|0005267||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA,potassium ion transmembrane transport|0071805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463233.1;locus_tag=C9E97_RS02895;product=potassium channel family protein;protein_id=WP_000899674.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	39260	39958	.	-	.	ID=gene-C9E97_RS02900;Name=C9E97_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02900;old_locus_tag=C9E97_02990
NZ_PYKA01000023.1	Protein Homology	CDS	39260	39958	.	-	0	ID=cds-WP_135369327.1;Parent=gene-C9E97_RS02900;Dbxref=GenBank:WP_135369327.1;Name=WP_135369327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463232.1;locus_tag=C9E97_RS02900;product=PspA/IM30 family protein;protein_id=WP_135369327.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	39973	40377	.	-	.	ID=gene-C9E97_RS02905;Name=C9E97_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02905;old_locus_tag=C9E97_02995
NZ_PYKA01000023.1	Protein Homology	CDS	39973	40377	.	-	0	ID=cds-WP_001621793.1;Parent=gene-C9E97_RS02905;Dbxref=GenBank:WP_001621793.1;Name=WP_001621793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463231.1;locus_tag=C9E97_RS02905;product=YjfI family protein;protein_id=WP_001621793.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	40510	41241	.	-	.	ID=gene-C9E97_RS02910;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=C9E97_RS02910;old_locus_tag=C9E97_03000
NZ_PYKA01000023.1	Protein Homology	CDS	40510	41241	.	-	0	ID=cds-WP_001293277.1;Parent=gene-C9E97_RS02910;Dbxref=GenBank:WP_001293277.1;Name=WP_001293277.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463230.1;locus_tag=C9E97_RS02910;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_001293277.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	41332	43770	.	-	.	ID=gene-C9E97_RS02915;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=C9E97_RS02915;old_locus_tag=C9E97_03005
NZ_PYKA01000023.1	Protein Homology	CDS	41332	43770	.	-	0	ID=cds-WP_023261114.1;Parent=gene-C9E97_RS02915;Dbxref=GenBank:WP_023261114.1;Name=WP_023261114.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463229.1;locus_tag=C9E97_RS02915;product=ribonuclease R;protein_id=WP_023261114.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	43808	44233	.	-	.	ID=gene-C9E97_RS02920;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=C9E97_RS02920;old_locus_tag=C9E97_03010
NZ_PYKA01000023.1	Protein Homology	CDS	43808	44233	.	-	0	ID=cds-WP_001177632.1;Parent=gene-C9E97_RS02920;Dbxref=GenBank:WP_001177632.1;Name=WP_001177632.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=C9E97_RS02920;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_001177632.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	44448	45746	.	-	.	ID=gene-C9E97_RS02925;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=C9E97_RS02925;old_locus_tag=C9E97_03015
NZ_PYKA01000023.1	Protein Homology	CDS	44448	45746	.	-	0	ID=cds-WP_000527960.1;Parent=gene-C9E97_RS02925;Dbxref=GenBank:WP_000527960.1;Name=WP_000527960.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=C9E97_RS02925;product=adenylosuccinate synthase;protein_id=WP_000527960.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	45849	46046	.	-	.	ID=gene-C9E97_RS02930;Name=C9E97_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02930;old_locus_tag=C9E97_03020
NZ_PYKA01000023.1	Protein Homology	CDS	45849	46046	.	-	0	ID=cds-WP_001089290.1;Parent=gene-C9E97_RS02930;Dbxref=GenBank:WP_001089290.1;Name=WP_001089290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463226.1;locus_tag=C9E97_RS02930;product=DUF2065 domain-containing protein;protein_id=WP_001089290.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	46125	47129	.	-	.	ID=gene-C9E97_RS02935;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=C9E97_RS02935;old_locus_tag=C9E97_03025
NZ_PYKA01000023.1	Protein Homology	CDS	46125	47129	.	-	0	ID=cds-WP_001232417.1;Parent=gene-C9E97_RS02935;Dbxref=GenBank:WP_001232417.1;Name=WP_001232417.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463225.1;locus_tag=C9E97_RS02935;product=protease modulator HflC;protein_id=WP_001232417.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	47132	48391	.	-	.	ID=gene-C9E97_RS02940;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=C9E97_RS02940;old_locus_tag=C9E97_03030
NZ_PYKA01000023.1	Protein Homology	CDS	47132	48391	.	-	0	ID=cds-WP_000312505.1;Parent=gene-C9E97_RS02940;Dbxref=GenBank:WP_000312505.1;Name=WP_000312505.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463224.1;locus_tag=C9E97_RS02940;product=FtsH protease activity modulator HflK;protein_id=WP_000312505.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	48606	49886	.	-	.	ID=gene-C9E97_RS02945;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=C9E97_RS02945;old_locus_tag=C9E97_03035
NZ_PYKA01000023.1	Protein Homology	CDS	48606	49886	.	-	0	ID=cds-WP_000460338.1;Parent=gene-C9E97_RS02945;Dbxref=GenBank:WP_000460338.1;Name=WP_000460338.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463223.1;locus_tag=C9E97_RS02945;product=ribosome rescue GTPase HflX;protein_id=WP_000460338.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	49958	50266	.	-	.	ID=gene-C9E97_RS02950;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=C9E97_RS02950;old_locus_tag=C9E97_03040
NZ_PYKA01000023.1	Protein Homology	CDS	49958	50266	.	-	0	ID=cds-WP_001051875.1;Parent=gene-C9E97_RS02950;Dbxref=GenBank:WP_001051875.1;Name=WP_001051875.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463222.1;locus_tag=C9E97_RS02950;product=RNA chaperone Hfq;protein_id=WP_001051875.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	50349	51299	.	-	.	ID=gene-C9E97_RS02955;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=C9E97_RS02955;old_locus_tag=C9E97_03045
NZ_PYKA01000023.1	Protein Homology	CDS	50349	51299	.	-	0	ID=cds-WP_001000734.1;Parent=gene-C9E97_RS02955;Dbxref=GenBank:WP_001000734.1;Name=WP_001000734.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463221.1;locus_tag=C9E97_RS02955;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001000734.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	51292	53148	.	-	.	ID=gene-C9E97_RS02960;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=C9E97_RS02960;old_locus_tag=C9E97_03050
NZ_PYKA01000023.1	Protein Homology	CDS	51292	53148	.	-	0	ID=cds-WP_135369324.1;Parent=gene-C9E97_RS02960;Dbxref=GenBank:WP_135369324.1;Name=WP_135369324.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463220.1;locus_tag=C9E97_RS02960;product=DNA mismatch repair endonuclease MutL;protein_id=WP_135369324.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	53158	54477	.	-	.	ID=gene-C9E97_RS02965;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=C9E97_RS02965;old_locus_tag=C9E97_03055
NZ_PYKA01000023.1	Protein Homology	CDS	53158	54477	.	-	0	ID=cds-WP_000640362.1;Parent=gene-C9E97_RS02965;Dbxref=GenBank:WP_000640362.1;Name=WP_000640362.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463219.1;locus_tag=C9E97_RS02965;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_000640362.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	54494	54955	.	-	.	ID=gene-C9E97_RS02970;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=C9E97_RS02970;old_locus_tag=C9E97_03060
NZ_PYKA01000023.1	Protein Homology	CDS	54494	54955	.	-	0	ID=cds-WP_000981984.1;Parent=gene-C9E97_RS02970;Dbxref=GenBank:WP_000981984.1;Name=WP_000981984.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463218.1;locus_tag=C9E97_RS02970;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_000981984.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	54927	56474	.	-	.	ID=gene-C9E97_RS02975;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=C9E97_RS02975;old_locus_tag=C9E97_03065
NZ_PYKA01000023.1	Protein Homology	CDS	54927	56474	.	-	0	ID=cds-WP_000968675.1;Parent=gene-C9E97_RS02975;Dbxref=GenBank:WP_000968675.1;Name=WP_000968675.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463217.1;locus_tag=C9E97_RS02975;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_000968675.1;transl_table=11
NZ_PYKA01000023.1	RefSeq	gene	56473	57612	.	+	.	ID=gene-C9E97_RS02980;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=C9E97_RS02980;old_locus_tag=C9E97_03070
NZ_PYKA01000023.1	Protein Homology	CDS	56473	57612	.	+	0	ID=cds-WP_001670426.1;Parent=gene-C9E97_RS02980;Dbxref=GenBank:WP_001670426.1;Name=WP_001670426.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=C9E97_RS02980;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001670426.1;transl_table=11
##sequence-region NZ_PYKA01000135.1 1 56909
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000135.1	RefSeq	region	1	56909	.	+	.	ID=NZ_PYKA01000135.1:1..56909;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000135.1	RefSeq	gene	225	2639	.	-	.	ID=gene-C9E97_RS22130;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=C9E97_RS22130;old_locus_tag=C9E97_22660
NZ_PYKA01000135.1	Protein Homology	CDS	225	2639	.	-	0	ID=cds-WP_000072047.1;Parent=gene-C9E97_RS22130;Dbxref=GenBank:WP_000072047.1;Name=WP_000072047.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=C9E97_RS22130;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_000072047.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	2668	3741	.	-	.	ID=gene-C9E97_RS22135;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=C9E97_RS22135;old_locus_tag=C9E97_22665
NZ_PYKA01000135.1	Protein Homology	CDS	2668	3741	.	-	0	ID=cds-WP_000060081.1;Parent=gene-C9E97_RS22135;Dbxref=GenBank:WP_000060081.1;Name=WP_000060081.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=C9E97_RS22135;product=DNA replication/repair protein RecF;protein_id=WP_000060081.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	3889	4989	.	-	.	ID=gene-C9E97_RS22140;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=C9E97_RS22140;old_locus_tag=C9E97_22670
NZ_PYKA01000135.1	Protein Homology	CDS	3889	4989	.	-	0	ID=cds-WP_000673474.1;Parent=gene-C9E97_RS22140;Dbxref=GenBank:WP_000673474.1;Name=WP_000673474.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=C9E97_RS22140;product=DNA polymerase III subunit beta;protein_id=WP_000673474.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	4994	6394	.	-	.	ID=gene-C9E97_RS22145;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=C9E97_RS22145;old_locus_tag=C9E97_22675
NZ_PYKA01000135.1	Protein Homology	CDS	4994	6394	.	-	0	ID=cds-WP_000059093.1;Parent=gene-C9E97_RS22145;Dbxref=GenBank:WP_000059093.1;Name=WP_000059093.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462738.1;locus_tag=C9E97_RS22145;product=chromosomal replication initiator protein DnaA;protein_id=WP_000059093.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	6734	6826	.	+	.	ID=gene-C9E97_RS24140;Name=C9E97_RS24140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS24140
NZ_PYKA01000135.1	Protein Homology	CDS	6734	6826	.	+	0	ID=cds-WP_418142141.1;Parent=gene-C9E97_RS24140;Dbxref=GenBank:WP_418142141.1;Name=WP_418142141.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048187.1;locus_tag=C9E97_RS24140;product=hypothetical protein;protein_id=WP_418142141.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	7055	7195	.	+	.	ID=gene-C9E97_RS22150;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=C9E97_RS22150;old_locus_tag=C9E97_22680
NZ_PYKA01000135.1	Protein Homology	CDS	7055	7195	.	+	0	ID=cds-WP_000831330.1;Parent=gene-C9E97_RS22150;Dbxref=GenBank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=C9E97_RS22150;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	7212	7571	.	+	.	ID=gene-C9E97_RS22155;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=C9E97_RS22155;old_locus_tag=C9E97_22685
NZ_PYKA01000135.1	Protein Homology	CDS	7212	7571	.	+	0	ID=cds-WP_000239725.1;Parent=gene-C9E97_RS22155;Dbxref=GenBank:WP_000239725.1;Name=WP_000239725.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=C9E97_RS22155;product=ribonuclease P protein component;protein_id=WP_000239725.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	7535	7792	.	+	.	ID=gene-C9E97_RS22160;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=C9E97_RS22160;old_locus_tag=C9E97_22690
NZ_PYKA01000135.1	Protein Homology	CDS	7535	7792	.	+	0	ID=cds-WP_001307474.1;Parent=gene-C9E97_RS22160;Dbxref=GenBank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=C9E97_RS22160;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	7795	9441	.	+	.	ID=gene-C9E97_RS22165;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=C9E97_RS22165;old_locus_tag=C9E97_22695
NZ_PYKA01000135.1	Protein Homology	CDS	7795	9441	.	+	0	ID=cds-WP_000378281.1;Parent=gene-C9E97_RS22165;Dbxref=GenBank:WP_000378281.1;Name=WP_000378281.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=C9E97_RS22165;product=membrane protein insertase YidC;protein_id=WP_000378281.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	9582	10946	.	+	.	ID=gene-C9E97_RS22170;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=C9E97_RS22170;old_locus_tag=C9E97_22700
NZ_PYKA01000135.1	Protein Homology	CDS	9582	10946	.	+	0	ID=cds-WP_000019081.1;Parent=gene-C9E97_RS22170;Dbxref=GenBank:WP_000019081.1;Name=WP_000019081.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=C9E97_RS22170;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_000019081.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	11129	12316	.	+	.	ID=gene-C9E97_RS22175;Name=C9E97_RS22175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22175;old_locus_tag=C9E97_22705
NZ_PYKA01000135.1	Protein Homology	CDS	11129	12316	.	+	0	ID=cds-WP_000819609.1;Parent=gene-C9E97_RS22175;Dbxref=GenBank:WP_000819609.1;Name=WP_000819609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608974.1;locus_tag=C9E97_RS22175;product=MFS transporter;protein_id=WP_000819609.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	12285	13244	.	+	.	ID=gene-C9E97_RS22180;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=C9E97_RS22180;old_locus_tag=C9E97_22710
NZ_PYKA01000135.1	Protein Homology	CDS	12285	13244	.	+	0	ID=cds-WP_000749370.1;Parent=gene-C9E97_RS22180;Dbxref=GenBank:WP_000749370.1;Name=WP_000749370.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=C9E97_RS22180;product=HTH-type transcriptional regulator YidZ;protein_id=WP_000749370.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	13402	14157	.	+	.	ID=gene-C9E97_RS22185;Name=C9E97_RS22185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22185;old_locus_tag=C9E97_22715
NZ_PYKA01000135.1	Protein Homology	CDS	13402	14157	.	+	0	ID=cds-WP_000190678.1;Parent=gene-C9E97_RS22185;Dbxref=GenBank:WP_000190678.1;Name=WP_000190678.1;Ontology_term=GO:0008897;gbkey=CDS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462748.1;locus_tag=C9E97_RS22185;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_000190678.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	14157	14741	.	+	.	ID=gene-C9E97_RS22190;Name=C9E97_RS22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22190;old_locus_tag=C9E97_22720
NZ_PYKA01000135.1	Protein Homology	CDS	14157	14741	.	+	0	ID=cds-WP_001521186.1;Parent=gene-C9E97_RS22190;Dbxref=GenBank:WP_001521186.1;Name=WP_001521186.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462749.3;locus_tag=C9E97_RS22190;product=NADPH-dependent FMN reductase;protein_id=WP_001521186.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	14786	16123	.	-	.	ID=gene-C9E97_RS22195;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=C9E97_RS22195;old_locus_tag=C9E97_22725
NZ_PYKA01000135.1	Protein Homology	CDS	14786	16123	.	-	0	ID=cds-WP_001521829.1;Parent=gene-C9E97_RS22195;Dbxref=GenBank:WP_001521829.1;Name=WP_001521829.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=C9E97_RS22195;product=adenine permease AdeP;protein_id=WP_001521829.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	16292	16957	.	+	.	ID=gene-C9E97_RS22200;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=C9E97_RS22200;old_locus_tag=C9E97_22730
NZ_PYKA01000135.1	Protein Homology	CDS	16292	16957	.	+	0	ID=cds-WP_135369100.1;Parent=gene-C9E97_RS22200;Dbxref=GenBank:WP_135369100.1;Name=WP_135369100.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462751.1;locus_tag=C9E97_RS22200;product=6-phosphogluconate phosphatase;protein_id=WP_135369100.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	17052	17777	.	-	.	ID=gene-C9E97_RS22205;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=C9E97_RS22205;old_locus_tag=C9E97_22735
NZ_PYKA01000135.1	Protein Homology	CDS	17052	17777	.	-	0	ID=cds-WP_000377800.1;Parent=gene-C9E97_RS22205;Dbxref=GenBank:WP_000377800.1;Name=WP_000377800.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462752.1;locus_tag=C9E97_RS22205;product=phosphate signaling complex protein PhoU;protein_id=WP_000377800.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	17792	18565	.	-	.	ID=gene-C9E97_RS22210;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=C9E97_RS22210;old_locus_tag=C9E97_22740
NZ_PYKA01000135.1	Protein Homology	CDS	17792	18565	.	-	0	ID=cds-WP_000063118.1;Parent=gene-C9E97_RS22210;Dbxref=GenBank:WP_000063118.1;Name=WP_000063118.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=C9E97_RS22210;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000063118.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	18652	19542	.	-	.	ID=gene-C9E97_RS22215;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=C9E97_RS22215;old_locus_tag=C9E97_22745
NZ_PYKA01000135.1	Protein Homology	CDS	18652	19542	.	-	0	ID=cds-WP_000212199.1;Parent=gene-C9E97_RS22215;Dbxref=GenBank:WP_000212199.1;Name=WP_000212199.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462754.1;locus_tag=C9E97_RS22215;product=phosphate ABC transporter permease PstA;protein_id=WP_000212199.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	19542	20501	.	-	.	ID=gene-C9E97_RS22220;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=C9E97_RS22220;old_locus_tag=C9E97_22750
NZ_PYKA01000135.1	Protein Homology	CDS	19542	20501	.	-	0	ID=cds-WP_000741630.1;Parent=gene-C9E97_RS22220;Dbxref=GenBank:WP_000741630.1;Name=WP_000741630.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=C9E97_RS22220;product=phosphate ABC transporter permease PstC;protein_id=WP_000741630.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	20637	21677	.	-	.	ID=gene-C9E97_RS22225;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=C9E97_RS22225;old_locus_tag=C9E97_22755
NZ_PYKA01000135.1	Protein Homology	CDS	20637	21677	.	-	0	ID=cds-WP_000867131.1;Parent=gene-C9E97_RS22225;Dbxref=GenBank:WP_000867131.1;Name=WP_000867131.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=C9E97_RS22225;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_000867131.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	21844	23217	.	-	.	ID=gene-C9E97_RS23905;Name=C9E97_RS23905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23905;old_locus_tag=C9E97_22760
NZ_PYKA01000135.1	Protein Homology	CDS	21844	23217	.	-	0	ID=cds-WP_001525663.1;Parent=gene-C9E97_RS23905;Dbxref=GenBank:WP_001525663.1;Name=WP_001525663.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462757.1;locus_tag=C9E97_RS23905;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_001525663.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	23266	24084	.	-	.	ID=gene-C9E97_RS23910;Name=C9E97_RS23910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23910;old_locus_tag=C9E97_22765
NZ_PYKA01000135.1	Protein Homology	CDS	23266	24084	.	-	0	ID=cds-WP_000166716.1;Parent=gene-C9E97_RS23910;Dbxref=GenBank:WP_000166716.1;Name=WP_000166716.1;Ontology_term=GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462758.1;locus_tag=C9E97_RS23910;product=shikimate 5-dehydrogenase;protein_id=WP_000166716.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	24179	25936	.	+	.	ID=gene-C9E97_RS22240;Name=C9E97_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22240;old_locus_tag=C9E97_22770
NZ_PYKA01000135.1	Protein Homology	CDS	24179	25936	.	+	0	ID=cds-WP_000213165.1;Parent=gene-C9E97_RS22240;Dbxref=GenBank:WP_000213165.1;Name=WP_000213165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462759.1;locus_tag=C9E97_RS22240;product=SgrR family transcriptional regulator;protein_id=WP_000213165.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	26087	27916	.	-	.	ID=gene-C9E97_RS22245;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=C9E97_RS22245;old_locus_tag=C9E97_22775
NZ_PYKA01000135.1	Protein Homology	CDS	26087	27916	.	-	0	ID=cds-WP_000334052.1;Parent=gene-C9E97_RS22245;Dbxref=GenBank:WP_000334052.1;Name=WP_000334052.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=C9E97_RS22245;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_000334052.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	28105	29475	.	-	.	ID=gene-C9E97_RS22250;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=C9E97_RS22250;old_locus_tag=C9E97_22780
NZ_PYKA01000135.1	Protein Homology	CDS	28105	29475	.	-	0	ID=cds-WP_000934851.1;Parent=gene-C9E97_RS22250;Dbxref=GenBank:WP_000934851.1;Name=WP_000934851.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462761.1;locus_tag=C9E97_RS22250;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_000934851.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	29795	30493	.	-	.	ID=gene-C9E97_RS22260;Name=C9E97_RS22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22260;old_locus_tag=C9E97_22790
NZ_PYKA01000135.1	Protein Homology	CDS	29795	30493	.	-	0	ID=cds-WP_000009908.1;Parent=gene-C9E97_RS22260;Dbxref=GenBank:WP_000009908.1;Name=WP_000009908.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462762.1;locus_tag=C9E97_RS22260;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000009908.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	30723	31142	.	-	.	ID=gene-C9E97_RS22265;Name=C9E97_RS22265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22265;old_locus_tag=C9E97_22795
NZ_PYKA01000135.1	Protein Homology	CDS	30723	31142	.	-	0	ID=cds-WP_001251971.1;Parent=gene-C9E97_RS22265;Dbxref=GenBank:WP_001251971.1;Name=WP_001251971.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=C9E97_RS22265;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251971.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	31163	32545	.	-	.	ID=gene-C9E97_RS22270;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=C9E97_RS22270;old_locus_tag=C9E97_22800
NZ_PYKA01000135.1	Protein Homology	CDS	31163	32545	.	-	0	ID=cds-WP_000190499.1;Parent=gene-C9E97_RS22270;Dbxref=GenBank:WP_000190499.1;Name=WP_000190499.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=C9E97_RS22270;product=F0F1 ATP synthase subunit beta;protein_id=WP_000190499.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	32572	33435	.	-	.	ID=gene-C9E97_RS22275;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=C9E97_RS22275;old_locus_tag=C9E97_22805
NZ_PYKA01000135.1	Protein Homology	CDS	32572	33435	.	-	0	ID=cds-WP_000896506.1;Parent=gene-C9E97_RS22275;Dbxref=GenBank:WP_000896506.1;Name=WP_000896506.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=C9E97_RS22275;product=F0F1 ATP synthase subunit gamma;protein_id=WP_000896506.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	33486	35027	.	-	.	ID=gene-C9E97_RS22280;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=C9E97_RS22280;old_locus_tag=C9E97_22810
NZ_PYKA01000135.1	Protein Homology	CDS	33486	35027	.	-	0	ID=cds-WP_001176751.1;Parent=gene-C9E97_RS22280;Dbxref=GenBank:WP_001176751.1;Name=WP_001176751.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=C9E97_RS22280;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001176751.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	35040	35573	.	-	.	ID=gene-C9E97_RS22285;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=C9E97_RS22285;old_locus_tag=C9E97_22815
NZ_PYKA01000135.1	Protein Homology	CDS	35040	35573	.	-	0	ID=cds-WP_001288957.1;Parent=gene-C9E97_RS22285;Dbxref=GenBank:WP_001288957.1;Name=WP_001288957.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=C9E97_RS22285;product=F0F1 ATP synthase subunit delta;protein_id=WP_001288957.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	35588	36058	.	-	.	ID=gene-C9E97_RS22290;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=C9E97_RS22290;old_locus_tag=C9E97_22820
NZ_PYKA01000135.1	Protein Homology	CDS	35588	36058	.	-	0	ID=cds-WP_001052212.1;Parent=gene-C9E97_RS22290;Dbxref=GenBank:WP_001052212.1;Name=WP_001052212.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=C9E97_RS22290;product=F0F1 ATP synthase subunit B;protein_id=WP_001052212.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	36118	36357	.	-	.	ID=gene-C9E97_RS22295;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=C9E97_RS22295;old_locus_tag=C9E97_22825
NZ_PYKA01000135.1	Protein Homology	CDS	36118	36357	.	-	0	ID=cds-WP_000429386.1;Parent=gene-C9E97_RS22295;Dbxref=GenBank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=C9E97_RS22295;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	36404	37219	.	-	.	ID=gene-C9E97_RS22300;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=C9E97_RS22300;old_locus_tag=C9E97_22830
NZ_PYKA01000135.1	Protein Homology	CDS	36404	37219	.	-	0	ID=cds-WP_000135632.1;Parent=gene-C9E97_RS22300;Dbxref=GenBank:WP_000135632.1;Name=WP_000135632.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=C9E97_RS22300;product=F0F1 ATP synthase subunit A;protein_id=WP_000135632.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	37228	37608	.	-	.	ID=gene-C9E97_RS22305;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=C9E97_RS22305;old_locus_tag=C9E97_22835
NZ_PYKA01000135.1	Protein Homology	CDS	37228	37608	.	-	0	ID=cds-WP_000116685.1;Parent=gene-C9E97_RS22305;Dbxref=GenBank:WP_000116685.1;Name=WP_000116685.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462771.1;locus_tag=C9E97_RS22305;product=F0F1 ATP synthase subunit I;protein_id=WP_000116685.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	38224	38847	.	-	.	ID=gene-C9E97_RS22310;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=C9E97_RS22310;old_locus_tag=C9E97_22840
NZ_PYKA01000135.1	Protein Homology	CDS	38224	38847	.	-	0	ID=cds-WP_001519938.1;Parent=gene-C9E97_RS22310;Dbxref=GenBank:WP_001519938.1;Name=WP_001519938.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462772.3;locus_tag=C9E97_RS22310;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_001519938.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	38950	40839	.	-	.	ID=gene-C9E97_RS22315;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=C9E97_RS22315;old_locus_tag=C9E97_22845
NZ_PYKA01000135.1	Protein Homology	CDS	38950	40839	.	-	0	ID=cds-WP_000499872.1;Parent=gene-C9E97_RS22315;Dbxref=GenBank:WP_000499872.1;Name=WP_000499872.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=C9E97_RS22315;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_000499872.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	41218	41661	.	-	.	ID=gene-C9E97_RS22325;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=C9E97_RS22325;old_locus_tag=C9E97_22855
NZ_PYKA01000135.1	Protein Homology	CDS	41218	41661	.	-	0	ID=cds-WP_001518982.1;Parent=gene-C9E97_RS22325;Dbxref=GenBank:WP_001518982.1;Name=WP_001518982.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462774.1;locus_tag=C9E97_RS22325;product=FMN-binding protein MioC;protein_id=WP_001518982.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	41751	42209	.	-	.	ID=gene-C9E97_RS22330;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=C9E97_RS22330;old_locus_tag=C9E97_22860
NZ_PYKA01000135.1	Protein Homology	CDS	41751	42209	.	-	0	ID=cds-WP_000433018.1;Parent=gene-C9E97_RS22330;Dbxref=GenBank:WP_000433018.1;Name=WP_000433018.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462775.1;locus_tag=C9E97_RS22330;product=transcriptional regulator AsnC;protein_id=WP_000433018.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	42360	43352	.	+	.	ID=gene-C9E97_RS22335;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=C9E97_RS22335;old_locus_tag=C9E97_22865
NZ_PYKA01000135.1	Protein Homology	CDS	42360	43352	.	+	0	ID=cds-WP_000845123.1;Parent=gene-C9E97_RS22335;Dbxref=GenBank:WP_000845123.1;Name=WP_000845123.1;Ontology_term=GO:0006529,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462776.1;locus_tag=C9E97_RS22335;product=aspartate--ammonia ligase;protein_id=WP_000845123.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	43357	44808	.	-	.	ID=gene-C9E97_RS22340;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=C9E97_RS22340;old_locus_tag=C9E97_22870
NZ_PYKA01000135.1	Protein Homology	CDS	43357	44808	.	-	0	ID=cds-WP_135369092.1;Parent=gene-C9E97_RS22340;Dbxref=GenBank:WP_135369092.1;Name=WP_135369092.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=C9E97_RS22340;product=ATPase RavA stimulator ViaA;protein_id=WP_135369092.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	44802	46298	.	-	.	ID=gene-C9E97_RS22345;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=C9E97_RS22345;old_locus_tag=C9E97_22875
NZ_PYKA01000135.1	Protein Homology	CDS	44802	46298	.	-	0	ID=cds-WP_023227873.1;Parent=gene-C9E97_RS22345;Dbxref=GenBank:WP_023227873.1;Name=WP_023227873.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462778.1;locus_tag=C9E97_RS22345;product=ATPase RavA;protein_id=WP_023227873.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	46646	48514	.	+	.	ID=gene-C9E97_RS22350;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=C9E97_RS22350;old_locus_tag=C9E97_22880
NZ_PYKA01000135.1	Protein Homology	CDS	46646	48514	.	+	0	ID=cds-WP_000102338.1;Parent=gene-C9E97_RS22350;Dbxref=GenBank:WP_000102338.1;Name=WP_000102338.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=C9E97_RS22350;product=low affinity potassium transporter Kup;protein_id=WP_000102338.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	48731	49150	.	+	.	ID=gene-C9E97_RS22355;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=C9E97_RS22355;old_locus_tag=C9E97_22885
NZ_PYKA01000135.1	Protein Homology	CDS	48731	49150	.	+	0	ID=cds-WP_000715945.1;Parent=gene-C9E97_RS22355;Dbxref=GenBank:WP_000715945.1;Name=WP_000715945.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462780.1;locus_tag=C9E97_RS22355;product=D-ribose pyranase;protein_id=WP_000715945.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	49158	50663	.	+	.	ID=gene-C9E97_RS22360;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=C9E97_RS22360;old_locus_tag=C9E97_22890
NZ_PYKA01000135.1	Protein Homology	CDS	49158	50663	.	+	0	ID=cds-WP_000339366.1;Parent=gene-C9E97_RS22360;Dbxref=GenBank:WP_000339366.1;Name=WP_000339366.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462781.1;locus_tag=C9E97_RS22360;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_000339366.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	50669	51634	.	+	.	ID=gene-C9E97_RS22365;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=C9E97_RS22365;old_locus_tag=C9E97_22895
NZ_PYKA01000135.1	Protein Homology	CDS	50669	51634	.	+	0	ID=cds-WP_000211345.1;Parent=gene-C9E97_RS22365;Dbxref=GenBank:WP_000211345.1;Name=WP_000211345.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=C9E97_RS22365;product=ribose ABC transporter permease;protein_id=WP_000211345.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	51659	52549	.	+	.	ID=gene-C9E97_RS22370;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=C9E97_RS22370;old_locus_tag=C9E97_22900
NZ_PYKA01000135.1	Protein Homology	CDS	51659	52549	.	+	0	ID=cds-WP_001056260.1;Parent=gene-C9E97_RS22370;Dbxref=GenBank:WP_001056260.1;Name=WP_001056260.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462783.1;locus_tag=C9E97_RS22370;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_001056260.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	52682	53611	.	+	.	ID=gene-C9E97_RS22375;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=C9E97_RS22375;old_locus_tag=C9E97_22905
NZ_PYKA01000135.1	Protein Homology	CDS	52682	53611	.	+	0	ID=cds-WP_000844730.1;Parent=gene-C9E97_RS22375;Dbxref=GenBank:WP_000844730.1;Name=WP_000844730.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462784.1;locus_tag=C9E97_RS22375;product=ribokinase;protein_id=WP_000844730.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	53615	54613	.	+	.	ID=gene-C9E97_RS22380;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=C9E97_RS22380;old_locus_tag=C9E97_22910
NZ_PYKA01000135.1	Protein Homology	CDS	53615	54613	.	+	0	ID=cds-WP_000224495.1;Parent=gene-C9E97_RS22380;Dbxref=GenBank:WP_000224495.1;Name=WP_000224495.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462785.1;locus_tag=C9E97_RS22380;product=ribose operon transcriptional repressor RbsR;protein_id=WP_000224495.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	54579	56006	.	-	.	ID=gene-C9E97_RS22385;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=C9E97_RS22385;old_locus_tag=C9E97_22915
NZ_PYKA01000135.1	Protein Homology	CDS	54579	56006	.	-	0	ID=cds-WP_023209035.1;Parent=gene-C9E97_RS22385;Dbxref=GenBank:WP_023209035.1;Name=WP_023209035.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462786.1;locus_tag=C9E97_RS22385;product=multidrug transporter subunit MdtD;protein_id=WP_023209035.1;transl_table=11
NZ_PYKA01000135.1	RefSeq	gene	56018	56722	.	-	.	ID=gene-C9E97_RS22390;Name=C9E97_RS22390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22390;old_locus_tag=C9E97_22920
NZ_PYKA01000135.1	Protein Homology	CDS	56018	56722	.	-	0	ID=cds-WP_135369091.1;Parent=gene-C9E97_RS22390;Dbxref=GenBank:WP_135369091.1;Name=WP_135369091.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462787.1;locus_tag=C9E97_RS22390;product=FadR/GntR family transcriptional regulator;protein_id=WP_135369091.1;transl_table=11
##sequence-region NZ_PYKA01000126.1 1 56383
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000126.1	RefSeq	region	1	56383	.	+	.	ID=NZ_PYKA01000126.1:1..56383;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000126.1	RefSeq	gene	59	1357	.	-	.	ID=gene-C9E97_RS20395;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=C9E97_RS20395;old_locus_tag=C9E97_20865
NZ_PYKA01000126.1	Protein Homology	CDS	59	1357	.	-	0	ID=cds-WP_000673295.1;Parent=gene-C9E97_RS20395;Dbxref=GenBank:WP_000673295.1;Name=WP_000673295.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461413.1;locus_tag=C9E97_RS20395;product=penicillin binding protein PBP4B;protein_id=WP_000673295.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	1561	2136	.	+	.	ID=gene-C9E97_RS20400;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=C9E97_RS20400;old_locus_tag=C9E97_20870
NZ_PYKA01000126.1	Protein Homology	CDS	1561	2136	.	+	0	ID=cds-WP_000084037.1;Parent=gene-C9E97_RS20400;Dbxref=GenBank:WP_000084037.1;Name=WP_000084037.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461412.1;locus_tag=C9E97_RS20400;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_000084037.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	2261	3304	.	+	.	ID=gene-C9E97_RS20405;Name=C9E97_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20405;old_locus_tag=C9E97_20875
NZ_PYKA01000126.1	Protein Homology	CDS	2261	3304	.	+	0	ID=cds-WP_001270668.1;Parent=gene-C9E97_RS20405;Dbxref=GenBank:WP_001270668.1;Name=WP_001270668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461411.1;locus_tag=C9E97_RS20405;product=DUF1176 domain-containing protein;protein_id=WP_001270668.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	3432	3662	.	+	.	ID=gene-C9E97_RS20410;Name=C9E97_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20410;old_locus_tag=C9E97_20880
NZ_PYKA01000126.1	Protein Homology	CDS	3432	3662	.	+	0	ID=cds-WP_000700635.1;Parent=gene-C9E97_RS20410;Dbxref=GenBank:WP_000700635.1;Name=WP_000700635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461410.1;locus_tag=C9E97_RS20410;product=hypothetical protein;protein_id=WP_000700635.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	3725	5725	.	-	.	ID=gene-C9E97_RS20415;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=C9E97_RS20415;old_locus_tag=C9E97_20885
NZ_PYKA01000126.1	Protein Homology	CDS	3725	5725	.	-	0	ID=cds-WP_135369679.1;Parent=gene-C9E97_RS20415;Dbxref=GenBank:WP_135369679.1;Name=WP_135369679.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=C9E97_RS20415;product=transketolase;protein_id=WP_135369679.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	5745	6695	.	-	.	ID=gene-C9E97_RS20420;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=C9E97_RS20420;old_locus_tag=C9E97_20890
NZ_PYKA01000126.1	Protein Homology	CDS	5745	6695	.	-	0	ID=cds-WP_001072436.1;Parent=gene-C9E97_RS20420;Dbxref=GenBank:WP_001072436.1;Name=WP_001072436.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461408.1;locus_tag=C9E97_RS20420;product=transaldolase;protein_id=WP_001072436.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	6967	9246	.	+	.	ID=gene-C9E97_RS20425;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=C9E97_RS20425;old_locus_tag=C9E97_20900
NZ_PYKA01000126.1	Protein Homology	CDS	6967	9246	.	+	0	ID=cds-WP_000344299.1;Parent=gene-C9E97_RS20425;Dbxref=GenBank:WP_000344299.1;Name=WP_000344299.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461407.1;locus_tag=C9E97_RS20425;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_000344299.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	9664	9999	.	+	.	ID=gene-C9E97_RS20430;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=C9E97_RS20430;old_locus_tag=C9E97_20905
NZ_PYKA01000126.1	Protein Homology	CDS	9664	9999	.	+	0	ID=cds-WP_001031445.1;Parent=gene-C9E97_RS20430;Dbxref=GenBank:WP_001031445.1;Name=WP_001031445.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461405.1;locus_tag=C9E97_RS20430;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_001031445.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	10012	10491	.	+	.	ID=gene-C9E97_RS20435;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=C9E97_RS20435;old_locus_tag=C9E97_20910
NZ_PYKA01000126.1	Protein Homology	CDS	10012	10491	.	+	0	ID=cds-WP_000820751.1;Parent=gene-C9E97_RS20435;Dbxref=GenBank:WP_000820751.1;Name=WP_000820751.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461404.1;locus_tag=C9E97_RS20435;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_000820751.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	10469	11158	.	+	.	ID=gene-C9E97_RS20440;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=C9E97_RS20440;old_locus_tag=C9E97_20915
NZ_PYKA01000126.1	Protein Homology	CDS	10469	11158	.	+	0	ID=cds-WP_000733867.1;Parent=gene-C9E97_RS20440;Dbxref=GenBank:WP_000733867.1;Name=WP_000733867.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461403.1;locus_tag=C9E97_RS20440;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_000733867.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	11155	11958	.	+	.	ID=gene-C9E97_RS20445;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=C9E97_RS20445;old_locus_tag=C9E97_20920
NZ_PYKA01000126.1	Protein Homology	CDS	11155	11958	.	+	0	ID=cds-WP_000997656.1;Parent=gene-C9E97_RS20445;Dbxref=GenBank:WP_000997656.1;Name=WP_000997656.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461402.1;locus_tag=C9E97_RS20445;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_000997656.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	11955	12971	.	+	.	ID=gene-C9E97_RS20450;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=C9E97_RS20450;old_locus_tag=C9E97_20925
NZ_PYKA01000126.1	Protein Homology	CDS	11955	12971	.	+	0	ID=cds-WP_000582929.1;Parent=gene-C9E97_RS20450;Dbxref=GenBank:WP_000582929.1;Name=WP_000582929.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461401.1;locus_tag=C9E97_RS20450;product=phosphate acetyltransferase;protein_id=WP_000582929.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	13012	13302	.	+	.	ID=gene-C9E97_RS20455;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=C9E97_RS20455;old_locus_tag=C9E97_20930
NZ_PYKA01000126.1	Protein Homology	CDS	13012	13302	.	+	0	ID=cds-WP_000387716.1;Parent=gene-C9E97_RS20455;Dbxref=GenBank:WP_000387716.1;Name=WP_000387716.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461400.1;locus_tag=C9E97_RS20455;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387716.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	13415	13702	.	+	.	ID=gene-C9E97_RS20460;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=C9E97_RS20460;old_locus_tag=C9E97_20935
NZ_PYKA01000126.1	Protein Homology	CDS	13415	13702	.	+	0	ID=cds-WP_001522340.1;Parent=gene-C9E97_RS20460;Dbxref=GenBank:WP_001522340.1;Name=WP_001522340.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=C9E97_RS20460;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_001522340.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	13714	15117	.	+	.	ID=gene-C9E97_RS20465;Name=C9E97_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20465;old_locus_tag=C9E97_20940
NZ_PYKA01000126.1	Protein Homology	CDS	13714	15117	.	+	0	ID=cds-WP_058653377.1;Parent=gene-C9E97_RS20465;Dbxref=GenBank:WP_058653377.1;Name=WP_058653377.1;Ontology_term=GO:0004029,GO:0008774;gbkey=CDS;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA,acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=C9E97_RS20465;product=aldehyde dehydrogenase family protein;protein_id=WP_058653377.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	15128	15967	.	+	.	ID=gene-C9E97_RS20470;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=C9E97_RS20470;old_locus_tag=C9E97_20945
NZ_PYKA01000126.1	Protein Homology	CDS	15128	15967	.	+	0	ID=cds-WP_135369680.1;Parent=gene-C9E97_RS20470;Dbxref=GenBank:WP_135369680.1;Name=WP_135369680.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461397.1;locus_tag=C9E97_RS20470;product=ethanolamine utilization protein EutJ;protein_id=WP_135369680.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	15957	17144	.	+	.	ID=gene-C9E97_RS20475;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=C9E97_RS20475;old_locus_tag=C9E97_20950
NZ_PYKA01000126.1	Protein Homology	CDS	15957	17144	.	+	0	ID=cds-WP_001147505.1;Parent=gene-C9E97_RS20475;Dbxref=GenBank:WP_001147505.1;Name=WP_001147505.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461396.1;locus_tag=C9E97_RS20475;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_001147505.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	17264	18490	.	+	.	ID=gene-C9E97_RS20480;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=C9E97_RS20480;old_locus_tag=C9E97_20955
NZ_PYKA01000126.1	Protein Homology	CDS	17264	18490	.	+	0	ID=cds-WP_000512345.1;Parent=gene-C9E97_RS20480;Dbxref=GenBank:WP_000512345.1;Name=WP_000512345.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461395.1;locus_tag=C9E97_RS20480;product=ethanolamine utilization protein EutH;protein_id=WP_000512345.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	18487	19890	.	+	.	ID=gene-C9E97_RS20485;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=C9E97_RS20485;old_locus_tag=C9E97_20960
NZ_PYKA01000126.1	Protein Homology	CDS	18487	19890	.	+	0	ID=cds-WP_001097526.1;Parent=gene-C9E97_RS20485;Dbxref=GenBank:WP_001097526.1;Name=WP_001097526.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461394.1;locus_tag=C9E97_RS20485;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_001097526.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	19902	21263	.	+	.	ID=gene-C9E97_RS20490;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=C9E97_RS20490;old_locus_tag=C9E97_20965
NZ_PYKA01000126.1	Protein Homology	CDS	19902	21263	.	+	0	ID=cds-WP_000769990.1;Parent=gene-C9E97_RS20490;Dbxref=GenBank:WP_000769990.1;Name=WP_000769990.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461393.1;locus_tag=C9E97_RS20490;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WP_000769990.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	21282	22178	.	+	.	ID=gene-C9E97_RS20495;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=C9E97_RS20495;old_locus_tag=C9E97_20970
NZ_PYKA01000126.1	Protein Homology	CDS	21282	22178	.	+	0	ID=cds-WP_000372354.1;Parent=gene-C9E97_RS20495;Dbxref=GenBank:WP_000372354.1;Name=WP_000372354.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461392.1;locus_tag=C9E97_RS20495;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_000372354.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	22188	22847	.	+	.	ID=gene-C9E97_RS20500;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=C9E97_RS20500;old_locus_tag=C9E97_20975
NZ_PYKA01000126.1	Protein Homology	CDS	22188	22847	.	+	0	ID=cds-WP_001111056.1;Parent=gene-C9E97_RS20500;Dbxref=GenBank:WP_001111056.1;Name=WP_001111056.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461391.1;locus_tag=C9E97_RS20500;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_001111056.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	22860	23354	.	+	.	ID=gene-C9E97_RS20505;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=C9E97_RS20505;old_locus_tag=C9E97_20980
NZ_PYKA01000126.1	Protein Homology	CDS	22860	23354	.	+	0	ID=cds-WP_000606266.1;Parent=gene-C9E97_RS20505;Dbxref=GenBank:WP_000606266.1;Name=WP_000606266.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461390.1;locus_tag=C9E97_RS20505;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_000606266.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	23402	24454	.	+	.	ID=gene-C9E97_RS20510;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=C9E97_RS20510;old_locus_tag=C9E97_20985
NZ_PYKA01000126.1	Protein Homology	CDS	23402	24454	.	+	0	ID=cds-WP_000753665.1;Parent=gene-C9E97_RS20510;Dbxref=GenBank:WP_000753665.1;Name=WP_000753665.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461389.1;locus_tag=C9E97_RS20510;product=HTH-type transcriptional regulator EutR;protein_id=WP_000753665.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	24654	25931	.	-	.	ID=gene-C9E97_RS20520;Name=C9E97_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20520;old_locus_tag=C9E97_20995
NZ_PYKA01000126.1	Protein Homology	CDS	24654	25931	.	-	0	ID=cds-WP_079839934.1;Parent=gene-C9E97_RS20520;Dbxref=GenBank:WP_079839934.1;Name=WP_079839934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461388.1;locus_tag=C9E97_RS20520;product=DUF1963 domain-containing protein;protein_id=WP_079839934.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	26060	26389	.	-	.	ID=gene-C9E97_RS20525;Name=C9E97_RS20525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20525;old_locus_tag=C9E97_21000
NZ_PYKA01000126.1	Protein Homology	CDS	26060	26389	.	-	0	ID=cds-WP_001194345.1;Parent=gene-C9E97_RS20525;Dbxref=GenBank:WP_001194345.1;Name=WP_001194345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461387.1;locus_tag=C9E97_RS20525;product=hypothetical protein;protein_id=WP_001194345.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	26410	27309	.	-	.	ID=gene-C9E97_RS20530;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=C9E97_RS20530;old_locus_tag=C9E97_21005
NZ_PYKA01000126.1	Protein Homology	CDS	26410	27309	.	-	0	ID=cds-WP_000801330.1;Parent=gene-C9E97_RS20530;Dbxref=GenBank:WP_000801330.1;Name=WP_000801330.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461386.1;locus_tag=C9E97_RS20530;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_000801330.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	27312	28181	.	-	.	ID=gene-C9E97_RS20535;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=C9E97_RS20535;old_locus_tag=C9E97_21010
NZ_PYKA01000126.1	Protein Homology	CDS	27312	28181	.	-	0	ID=cds-WP_000102880.1;Parent=gene-C9E97_RS20535;Dbxref=GenBank:WP_000102880.1;Name=WP_000102880.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461385.1;locus_tag=C9E97_RS20535;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_000102880.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	28394	28819	.	+	.	ID=gene-C9E97_RS20540;Name=C9E97_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20540;old_locus_tag=C9E97_21015
NZ_PYKA01000126.1	Protein Homology	CDS	28394	28819	.	+	0	ID=cds-WP_000406008.1;Parent=gene-C9E97_RS20540;Dbxref=GenBank:WP_000406008.1;Name=WP_000406008.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=C9E97_RS20540;product=GNAT family acetyltransferase;protein_id=WP_000406008.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	28806	29255	.	+	.	ID=gene-C9E97_RS20545;Name=C9E97_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20545;old_locus_tag=C9E97_21020
NZ_PYKA01000126.1	Protein Homology	CDS	28806	29255	.	+	0	ID=cds-WP_031605647.1;Parent=gene-C9E97_RS20545;Dbxref=GenBank:WP_031605647.1;Name=WP_031605647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461383.1;locus_tag=C9E97_RS20545;product=DUF2919 domain-containing protein;protein_id=WP_031605647.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	29317	29892	.	+	.	ID=gene-C9E97_RS20550;Name=C9E97_RS20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20550;old_locus_tag=C9E97_21025
NZ_PYKA01000126.1	Protein Homology	CDS	29317	29892	.	+	0	ID=cds-WP_000838971.1;Parent=gene-C9E97_RS20550;Dbxref=GenBank:WP_000838971.1;Name=WP_000838971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461382.1;locus_tag=C9E97_RS20550;product=RpoE-regulated lipoprotein;protein_id=WP_000838971.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	29987	30886	.	+	.	ID=gene-C9E97_RS20555;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=C9E97_RS20555;old_locus_tag=C9E97_21030
NZ_PYKA01000126.1	Protein Homology	CDS	29987	30886	.	+	0	ID=cds-WP_000084583.1;Parent=gene-C9E97_RS20555;Dbxref=GenBank:WP_000084583.1;Name=WP_000084583.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461381.1;locus_tag=C9E97_RS20555;product=porphyrinogen peroxidase;protein_id=WP_000084583.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	31134	31925	.	+	.	ID=gene-C9E97_RS20560;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=C9E97_RS20560;old_locus_tag=C9E97_21035
NZ_PYKA01000126.1	Protein Homology	CDS	31134	31925	.	+	0	ID=cds-WP_000517460.1;Parent=gene-C9E97_RS20560;Dbxref=GenBank:WP_000517460.1;Name=WP_000517460.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461380.1;locus_tag=C9E97_RS20560;product=SDR family oxidoreductase UcpA;protein_id=WP_000517460.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	32083	33099	.	+	.	ID=gene-C9E97_RS20565;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=C9E97_RS20565;old_locus_tag=C9E97_21040
NZ_PYKA01000126.1	Protein Homology	CDS	32083	33099	.	+	0	ID=cds-WP_135369681.1;Parent=gene-C9E97_RS20565;Dbxref=GenBank:WP_135369681.1;Name=WP_135369681.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461379.1;locus_tag=C9E97_RS20565;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_135369681.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	33099	33932	.	+	.	ID=gene-C9E97_RS20570;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=C9E97_RS20570;old_locus_tag=C9E97_21045
NZ_PYKA01000126.1	Protein Homology	CDS	33099	33932	.	+	0	ID=cds-WP_135369682.1;Parent=gene-C9E97_RS20570;Dbxref=GenBank:WP_135369682.1;Name=WP_135369682.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=C9E97_RS20570;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_135369682.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	33932	34807	.	+	.	ID=gene-C9E97_RS20575;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=C9E97_RS20575;old_locus_tag=C9E97_21050
NZ_PYKA01000126.1	Protein Homology	CDS	33932	34807	.	+	0	ID=cds-WP_000852705.1;Parent=gene-C9E97_RS20575;Dbxref=GenBank:WP_000852705.1;Name=WP_000852705.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461377.1;locus_tag=C9E97_RS20575;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_000852705.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	34797	35894	.	+	.	ID=gene-C9E97_RS20580;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=C9E97_RS20580;old_locus_tag=C9E97_21055
NZ_PYKA01000126.1	Protein Homology	CDS	34797	35894	.	+	0	ID=cds-WP_000021076.1;Parent=gene-C9E97_RS20580;Dbxref=GenBank:WP_000021076.1;Name=WP_000021076.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461376.1;locus_tag=C9E97_RS20580;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_000021076.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	35962	36873	.	+	.	ID=gene-C9E97_RS20585;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=C9E97_RS20585;old_locus_tag=C9E97_21060
NZ_PYKA01000126.1	Protein Homology	CDS	35962	36873	.	+	0	ID=cds-WP_135369683.1;Parent=gene-C9E97_RS20585;Dbxref=GenBank:WP_135369683.1;Name=WP_135369683.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461375.1;locus_tag=C9E97_RS20585;product=cysteine synthase CysM;protein_id=WP_135369683.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	37004	37543	.	-	.	ID=gene-C9E97_RS20595;Name=C9E97_RS20595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20595;old_locus_tag=C9E97_21070
NZ_PYKA01000126.1	Protein Homology	CDS	37004	37543	.	-	0	ID=cds-WP_001119689.1;Parent=gene-C9E97_RS20595;Dbxref=GenBank:WP_001119689.1;Name=WP_001119689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461374.1;locus_tag=C9E97_RS20595;product=transglycosylase domain-containing protein;protein_id=WP_001119689.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	37556	37936	.	-	.	ID=gene-C9E97_RS20600;Name=C9E97_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20600;old_locus_tag=C9E97_21075
NZ_PYKA01000126.1	Protein Homology	CDS	37556	37936	.	-	0	ID=cds-WP_000710729.1;Parent=gene-C9E97_RS20600;Dbxref=GenBank:WP_000710729.1;Name=WP_000710729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461373.2;locus_tag=C9E97_RS20600;product=YfeK family protein;protein_id=WP_000710729.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	37995	38714	.	-	.	ID=gene-C9E97_RS20605;Name=C9E97_RS20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20605;old_locus_tag=C9E97_21080
NZ_PYKA01000126.1	Protein Homology	CDS	37995	38714	.	-	0	ID=cds-WP_001263761.1;Parent=gene-C9E97_RS20605;Dbxref=GenBank:WP_001263761.1;Name=WP_001263761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461372.1;locus_tag=C9E97_RS20605;product=GMP synthase;protein_id=WP_001263761.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	38729	40021	.	-	.	ID=gene-C9E97_RS20610;Name=ptsJ;gbkey=Gene;gene=ptsJ;gene_biotype=protein_coding;locus_tag=C9E97_RS20610;old_locus_tag=C9E97_21085
NZ_PYKA01000126.1	Protein Homology	CDS	38729	40021	.	-	0	ID=cds-WP_135369684.1;Parent=gene-C9E97_RS20610;Dbxref=GenBank:WP_135369684.1;Name=WP_135369684.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptsJ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461371.1;locus_tag=C9E97_RS20610;product=transcriptional regulator PtsJ;protein_id=WP_135369684.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	40104	40970	.	+	.	ID=gene-C9E97_RS20615;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=C9E97_RS20615;old_locus_tag=C9E97_21090
NZ_PYKA01000126.1	Protein Homology	CDS	40104	40970	.	+	0	ID=cds-WP_000529613.1;Parent=gene-C9E97_RS20615;Dbxref=GenBank:WP_000529613.1;Name=WP_000529613.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461370.1;locus_tag=C9E97_RS20615;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_000529613.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	40967	41206	.	+	.	ID=gene-C9E97_RS20620;Name=C9E97_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20620;old_locus_tag=C9E97_21095
NZ_PYKA01000126.1	Protein Homology	CDS	40967	41206	.	+	0	ID=cds-WP_135369685.1;Parent=gene-C9E97_RS20620;Dbxref=GenBank:WP_135369685.1;Name=WP_135369685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461369.1;locus_tag=C9E97_RS20620;product=cytoplasmic protein;protein_id=WP_135369685.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	41356	41865	.	-	.	ID=gene-C9E97_RS20625;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=C9E97_RS20625;old_locus_tag=C9E97_21100
NZ_PYKA01000126.1	Protein Homology	CDS	41356	41865	.	-	0	ID=cds-WP_000522253.1;Parent=gene-C9E97_RS20625;Dbxref=GenBank:WP_000522253.1;Name=WP_000522253.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=C9E97_RS20625;product=PTS glucose transporter subunit IIA;protein_id=WP_000522253.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	41906	43633	.	-	.	ID=gene-C9E97_RS20630;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=C9E97_RS20630;old_locus_tag=C9E97_21105
NZ_PYKA01000126.1	Protein Homology	CDS	41906	43633	.	-	0	ID=cds-WP_135369686.1;Parent=gene-C9E97_RS20630;Dbxref=GenBank:WP_135369686.1;Name=WP_135369686.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870786.1;locus_tag=C9E97_RS20630;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_135369686.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	43682	43939	.	-	.	ID=gene-C9E97_RS20635;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=C9E97_RS20635;old_locus_tag=C9E97_21110
NZ_PYKA01000126.1	Protein Homology	CDS	43682	43939	.	-	0	ID=cds-WP_000487600.1;Parent=gene-C9E97_RS20635;Dbxref=GenBank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=C9E97_RS20635;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	44323	45294	.	-	.	ID=gene-C9E97_RS20640;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=C9E97_RS20640;old_locus_tag=C9E97_21115
NZ_PYKA01000126.1	Protein Homology	CDS	44323	45294	.	-	0	ID=cds-WP_000036904.1;Parent=gene-C9E97_RS20640;Dbxref=GenBank:WP_000036904.1;Name=WP_000036904.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=C9E97_RS20640;product=cysteine synthase A;protein_id=WP_000036904.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	45458	46219	.	-	.	ID=gene-C9E97_RS20645;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=C9E97_RS20645;old_locus_tag=C9E97_21120
NZ_PYKA01000126.1	Protein Homology	CDS	45458	46219	.	-	0	ID=cds-WP_000255008.1;Parent=gene-C9E97_RS20645;Dbxref=GenBank:WP_000255008.1;Name=WP_000255008.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461364.1;locus_tag=C9E97_RS20645;product=sulfate transporter CysZ;protein_id=WP_000255008.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	46451	47437	.	+	.	ID=gene-C9E97_RS20650;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=C9E97_RS20650;old_locus_tag=C9E97_21125
NZ_PYKA01000126.1	Protein Homology	CDS	46451	47437	.	+	0	ID=cds-WP_000983126.1;Parent=gene-C9E97_RS20650;Dbxref=GenBank:WP_000983126.1;Name=WP_000983126.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461363.1;locus_tag=C9E97_RS20650;product=cell division protein ZipA;protein_id=WP_000983126.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	47509	49524	.	+	.	ID=gene-C9E97_RS20655;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=C9E97_RS20655;old_locus_tag=C9E97_21130
NZ_PYKA01000126.1	Protein Homology	CDS	47509	49524	.	+	0	ID=cds-WP_135369687.1;Parent=gene-C9E97_RS20655;Dbxref=GenBank:WP_135369687.1;Name=WP_135369687.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461362.1;locus_tag=C9E97_RS20655;product=NAD-dependent DNA ligase LigA;protein_id=WP_135369687.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	49526	49744	.	+	.	ID=gene-C9E97_RS20660;Name=C9E97_RS20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20660;old_locus_tag=C9E97_21135
NZ_PYKA01000126.1	Protein Homology	CDS	49526	49744	.	+	0	ID=cds-WP_001519708.1;Parent=gene-C9E97_RS20660;Dbxref=GenBank:WP_001519708.1;Name=WP_001519708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=C9E97_RS20660;product=DUF3820 family protein;protein_id=WP_001519708.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	49741	50739	.	-	.	ID=gene-C9E97_RS20665;Name=C9E97_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20665;old_locus_tag=C9E97_21140
NZ_PYKA01000126.1	Protein Homology	CDS	49741	50739	.	-	0	ID=cds-WP_000765569.1;Parent=gene-C9E97_RS20665;Dbxref=GenBank:WP_000765569.1;Name=WP_000765569.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461360.2;locus_tag=C9E97_RS20665;product=bile acid:sodium symporter family protein;protein_id=WP_000765569.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	50829	51755	.	+	.	ID=gene-C9E97_RS20670;Name=C9E97_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20670;old_locus_tag=C9E97_21145
NZ_PYKA01000126.1	Protein Homology	CDS	50829	51755	.	+	0	ID=cds-WP_001109835.1;Parent=gene-C9E97_RS20670;Dbxref=GenBank:WP_001109835.1;Name=WP_001109835.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461359.1;locus_tag=C9E97_RS20670;product=LysR family transcriptional regulator;protein_id=WP_001109835.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	51817	52578	.	-	.	ID=gene-C9E97_RS20675;Name=C9E97_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20675;old_locus_tag=C9E97_21150
NZ_PYKA01000126.1	Protein Homology	CDS	51817	52578	.	-	0	ID=cds-WP_000722930.1;Parent=gene-C9E97_RS20675;Dbxref=GenBank:WP_000722930.1;Name=WP_000722930.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461358.1;locus_tag=C9E97_RS20675;product=outer membrane protein OmpK;protein_id=WP_000722930.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	52834	53667	.	+	.	ID=gene-C9E97_RS20680;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=C9E97_RS20680;old_locus_tag=C9E97_21155
NZ_PYKA01000126.1	Protein Homology	CDS	52834	53667	.	+	0	ID=cds-WP_001119755.1;Parent=gene-C9E97_RS20680;Dbxref=GenBank:WP_001119755.1;Name=WP_001119755.1;Ontology_term=GO:0055086,GO:0004731,GO:0005737;gbkey=CDS;gene=xapA;go_component=cytoplasm|0005737||IEA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing small molecule metabolic process|0055086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448816.1;locus_tag=C9E97_RS20680;product=xanthosine phosphorylase;protein_id=WP_001119755.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	53722	54978	.	+	.	ID=gene-C9E97_RS20685;Name=C9E97_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20685;old_locus_tag=C9E97_21160
NZ_PYKA01000126.1	Protein Homology	CDS	53722	54978	.	+	0	ID=cds-WP_000513241.1;Parent=gene-C9E97_RS20685;Dbxref=GenBank:WP_000513241.1;Name=WP_000513241.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461356.1;locus_tag=C9E97_RS20685;product=nucleoside permease;protein_id=WP_000513241.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	55037	55195	.	+	.	ID=gene-C9E97_RS20690;Name=C9E97_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20690;old_locus_tag=C9E97_21165
NZ_PYKA01000126.1	Protein Homology	CDS	55037	55195	.	+	0	ID=cds-WP_000658727.1;Parent=gene-C9E97_RS20690;Dbxref=GenBank:WP_000658727.1;Name=WP_000658727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658729.1;locus_tag=C9E97_RS20690;product=XapX domain-containing protein;protein_id=WP_000658727.1;transl_table=11
NZ_PYKA01000126.1	RefSeq	gene	55247	56131	.	+	.	ID=gene-C9E97_RS20695;Name=C9E97_RS20695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20695;old_locus_tag=C9E97_21170
NZ_PYKA01000126.1	Protein Homology	CDS	55247	56131	.	+	0	ID=cds-WP_000438890.1;Parent=gene-C9E97_RS20695;Dbxref=GenBank:WP_000438890.1;Name=WP_000438890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461355.1;locus_tag=C9E97_RS20695;product=LysR family transcriptional regulator;protein_id=WP_000438890.1;transl_table=11
##sequence-region NZ_PYKA01000058.1 1 193412
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000058.1	RefSeq	region	1	193412	.	+	.	ID=NZ_PYKA01000058.1:1..193412;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000058.1	RefSeq	gene	152	2026	.	-	.	ID=gene-C9E97_RS07760;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=C9E97_RS07760;old_locus_tag=C9E97_07940
NZ_PYKA01000058.1	Protein Homology	CDS	152	2026	.	-	0	ID=cds-WP_001523272.1;Parent=gene-C9E97_RS07760;Dbxref=GenBank:WP_001523272.1;Name=WP_001523272.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=C9E97_RS07760;product=molecular chaperone HtpG;protein_id=WP_001523272.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	2137	2742	.	-	.	ID=gene-C9E97_RS07765;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=C9E97_RS07765;old_locus_tag=C9E97_07945
NZ_PYKA01000058.1	Protein Homology	CDS	2137	2742	.	-	0	ID=cds-WP_001195023.1;Parent=gene-C9E97_RS07765;Dbxref=GenBank:WP_001195023.1;Name=WP_001195023.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459481.1;locus_tag=C9E97_RS07765;product=recombination mediator RecR;protein_id=WP_001195023.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	2742	3071	.	-	.	ID=gene-C9E97_RS07770;Name=C9E97_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07770;old_locus_tag=C9E97_07950
NZ_PYKA01000058.1	Protein Homology	CDS	2742	3071	.	-	0	ID=cds-WP_000467098.1;Parent=gene-C9E97_RS07770;Dbxref=GenBank:WP_000467098.1;Name=WP_000467098.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=C9E97_RS07770;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_000467098.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	3117	5045	.	-	.	ID=gene-C9E97_RS07775;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=C9E97_RS07775;old_locus_tag=C9E97_07955
NZ_PYKA01000058.1	Protein Homology	CDS	3117	5045	.	-	0	ID=cds-WP_000121967.1;Parent=gene-C9E97_RS07775;Dbxref=GenBank:WP_000121967.1;Name=WP_000121967.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459479.1;locus_tag=C9E97_RS07775;product=DNA polymerase III subunit gamma/tau;protein_id=WP_000121967.1;transl_table=11
NZ_PYKA01000058.1	cmsearch	sequence_feature	3720	3784	.	-	.	ID=id-C9E97_RS07775;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS07775
NZ_PYKA01000058.1	RefSeq	gene	5159	5710	.	-	.	ID=gene-C9E97_RS07780;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=C9E97_RS07780;old_locus_tag=C9E97_07960
NZ_PYKA01000058.1	Protein Homology	CDS	5159	5710	.	-	0	ID=cds-WP_000127350.1;Parent=gene-C9E97_RS07780;Dbxref=GenBank:WP_000127350.1;Name=WP_000127350.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=C9E97_RS07780;product=adenine phosphoribosyltransferase;protein_id=WP_000127350.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	5863	6240	.	-	.	ID=gene-C9E97_RS07785;Name=C9E97_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07785;old_locus_tag=C9E97_07970
NZ_PYKA01000058.1	Protein Homology	CDS	5863	6240	.	-	0	ID=cds-WP_001189863.1;Parent=gene-C9E97_RS07785;Dbxref=GenBank:WP_001189863.1;Name=WP_001189863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459477.1;locus_tag=C9E97_RS07785;product=DUF454 family protein;protein_id=WP_001189863.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	6309	6836	.	+	.	ID=gene-C9E97_RS07790;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=C9E97_RS07790;old_locus_tag=C9E97_07975
NZ_PYKA01000058.1	Protein Homology	CDS	6309	6836	.	+	0	ID=cds-WP_001519637.1;Parent=gene-C9E97_RS07790;Dbxref=GenBank:WP_001519637.1;Name=WP_001519637.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001454692.1;locus_tag=C9E97_RS07790;product=primosomal replication protein N'';protein_id=WP_001519637.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	6850	7017	.	+	.	ID=gene-C9E97_RS07795;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=C9E97_RS07795;old_locus_tag=C9E97_07980
NZ_PYKA01000058.1	Protein Homology	CDS	6850	7017	.	+	0	ID=cds-WP_000051161.1;Parent=gene-C9E97_RS07795;Dbxref=GenBank:WP_000051161.1;Name=WP_000051161.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459475.1;locus_tag=C9E97_RS07795;product=pleiotropic regulatory protein RsmS;protein_id=WP_000051161.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	pseudogene	7087	7530	.	+	.	ID=gene-C9E97_RS23925;Name=C9E97_RS23925;end_range=7530,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23925;old_locus_tag=C9E97_07985;partial=true;pseudo=true
NZ_PYKA01000058.1	Protein Homology	CDS	7087	7530	.	+	0	ID=cds-C9E97_RS23925;Parent=gene-C9E97_RS23925;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004536,GO:0004803;end_range=7530,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA nuclease activity|0004536||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004223076.1;locus_tag=C9E97_RS23925;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11
NZ_PYKA01000058.1	RefSeq	pseudogene	7656	8147	.	+	.	ID=gene-C9E97_RS23930;Name=C9E97_RS23930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23930;old_locus_tag=C9E97_07990;partial=true;pseudo=true;start_range=.,7656
NZ_PYKA01000058.1	Protein Homology	CDS	7656	8147	.	+	0	ID=cds-C9E97_RS23930;Parent=gene-C9E97_RS23930;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459474.1;locus_tag=C9E97_RS23930;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;start_range=.,7656;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	8189	11551	.	-	.	ID=gene-C9E97_RS07810;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=C9E97_RS07810;old_locus_tag=C9E97_07995
NZ_PYKA01000058.1	Protein Homology	CDS	8189	11551	.	-	0	ID=cds-WP_000178249.1;Parent=gene-C9E97_RS07810;Dbxref=GenBank:WP_000178249.1;Name=WP_000178249.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459473.1;locus_tag=C9E97_RS07810;product=mechanosensitive channel MscK;protein_id=WP_000178249.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	11670	12323	.	-	.	ID=gene-C9E97_RS07815;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=C9E97_RS07815;old_locus_tag=C9E97_08000
NZ_PYKA01000058.1	Protein Homology	CDS	11670	12323	.	-	0	ID=cds-WP_000101755.1;Parent=gene-C9E97_RS07815;Dbxref=GenBank:WP_000101755.1;Name=WP_000101755.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459472.1;locus_tag=C9E97_RS07815;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_000101755.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	12465	13658	.	+	.	ID=gene-C9E97_RS07820;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=C9E97_RS07820;old_locus_tag=C9E97_08005
NZ_PYKA01000058.1	Protein Homology	CDS	12465	13658	.	+	0	ID=cds-WP_001039202.1;Parent=gene-C9E97_RS07820;Dbxref=GenBank:WP_001039202.1;Name=WP_001039202.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459471.1;locus_tag=C9E97_RS07820;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_001039202.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	13681	16830	.	+	.	ID=gene-C9E97_RS07825;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=C9E97_RS07825;old_locus_tag=C9E97_08010
NZ_PYKA01000058.1	Protein Homology	CDS	13681	16830	.	+	0	ID=cds-WP_001132508.1;Parent=gene-C9E97_RS07825;Dbxref=GenBank:WP_001132508.1;Name=WP_001132508.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=C9E97_RS07825;product=efflux RND transporter permease AcrB;protein_id=WP_001132508.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	17326	17700	.	+	.	ID=gene-C9E97_RS07830;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=C9E97_RS07830;old_locus_tag=C9E97_08015
NZ_PYKA01000058.1	Protein Homology	CDS	17326	17700	.	+	0	ID=cds-WP_000344807.1;Parent=gene-C9E97_RS07830;Dbxref=GenBank:WP_000344807.1;Name=WP_000344807.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=C9E97_RS07830;product=Hha toxicity modulator TomB;protein_id=WP_000344807.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	17728	17946	.	+	.	ID=gene-C9E97_RS07835;Name=C9E97_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07835;old_locus_tag=C9E97_08020
NZ_PYKA01000058.1	Protein Homology	CDS	17728	17946	.	+	0	ID=cds-WP_001280991.1;Parent=gene-C9E97_RS07835;Dbxref=GenBank:WP_001280991.1;Name=WP_001280991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459468.1;locus_tag=C9E97_RS07835;product=HHA domain-containing protein;protein_id=WP_001280991.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	18125	18676	.	+	.	ID=gene-C9E97_RS07840;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=C9E97_RS07840;old_locus_tag=C9E97_08025
NZ_PYKA01000058.1	Protein Homology	CDS	18125	18676	.	+	0	ID=cds-WP_001278793.1;Parent=gene-C9E97_RS07840;Dbxref=GenBank:WP_001278793.1;Name=WP_001278793.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459467.1;locus_tag=C9E97_RS07840;product=maltose O-acetyltransferase;protein_id=WP_001278793.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	18794	19264	.	+	.	ID=gene-C9E97_RS07845;Name=C9E97_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07845;old_locus_tag=C9E97_08030
NZ_PYKA01000058.1	Protein Homology	CDS	18794	19264	.	+	0	ID=cds-WP_000136183.1;Parent=gene-C9E97_RS07845;Dbxref=GenBank:WP_000136183.1;Name=WP_000136183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459466.1;locus_tag=C9E97_RS07845;product=YlaC family protein;protein_id=WP_000136183.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	19320	19460	.	-	.	ID=gene-C9E97_RS07850;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=C9E97_RS07850;old_locus_tag=C9E97_08035
NZ_PYKA01000058.1	Protein Homology	CDS	19320	19460	.	-	0	ID=cds-WP_001197749.1;Parent=gene-C9E97_RS07850;Dbxref=GenBank:WP_001197749.1;Name=WP_001197749.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459465.1;locus_tag=C9E97_RS07850;product=type B 50S ribosomal protein L36;protein_id=WP_001197749.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	19466	19726	.	-	.	ID=gene-C9E97_RS07855;Name=C9E97_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07855;old_locus_tag=C9E97_08040
NZ_PYKA01000058.1	Protein Homology	CDS	19466	19726	.	-	0	ID=cds-WP_000801415.1;Parent=gene-C9E97_RS07855;Dbxref=GenBank:WP_000801415.1;Name=WP_000801415.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459464.1;locus_tag=C9E97_RS07855;product=type B 50S ribosomal protein L31;protein_id=WP_000801415.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	19951	21501	.	+	.	ID=gene-C9E97_RS07860;Name=C9E97_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07860;old_locus_tag=C9E97_08045
NZ_PYKA01000058.1	Protein Homology	CDS	19951	21501	.	+	0	ID=cds-WP_135369699.1;Parent=gene-C9E97_RS07860;Dbxref=GenBank:WP_135369699.1;Name=WP_135369699.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459463.1;locus_tag=C9E97_RS07860;product=EAL domain-containing protein;protein_id=WP_135369699.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	21551	21647	.	-	.	ID=gene-C9E97_RS07865;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=C9E97_RS07865;old_locus_tag=C9E97_08050
NZ_PYKA01000058.1	cmsearch	SRP_RNA	21551	21647	.	-	.	ID=rna-C9E97_RS07865;Parent=gene-C9E97_RS07865;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS07865;product=signal recognition particle sRNA small type
NZ_PYKA01000058.1	cmsearch	exon	21551	21647	.	-	.	ID=exon-C9E97_RS07865-1;Parent=rna-C9E97_RS07865;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS07865;product=signal recognition particle sRNA small type
NZ_PYKA01000058.1	RefSeq	gene	21732	22121	.	+	.	ID=gene-C9E97_RS07870;Name=C9E97_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07870;old_locus_tag=C9E97_08055
NZ_PYKA01000058.1	Protein Homology	CDS	21732	22121	.	+	0	ID=cds-WP_000961285.1;Parent=gene-C9E97_RS07870;Dbxref=GenBank:WP_000961285.1;Name=WP_000961285.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459462.1;locus_tag=C9E97_RS07870;product=MGMT family protein;protein_id=WP_000961285.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	22154	22723	.	-	.	ID=gene-C9E97_RS07875;Name=C9E97_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07875;old_locus_tag=C9E97_08060
NZ_PYKA01000058.1	Protein Homology	CDS	22154	22723	.	-	0	ID=cds-WP_000779802.1;Parent=gene-C9E97_RS07875;Dbxref=GenBank:WP_000779802.1;Name=WP_000779802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459461.1;locus_tag=C9E97_RS07875;product=YbaY family lipoprotein;protein_id=WP_000779802.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	22938	23798	.	+	.	ID=gene-C9E97_RS07880;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=C9E97_RS07880;old_locus_tag=C9E97_08065
NZ_PYKA01000058.1	Protein Homology	CDS	22938	23798	.	+	0	ID=cds-WP_000084176.1;Parent=gene-C9E97_RS07880;Dbxref=GenBank:WP_000084176.1;Name=WP_000084176.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459460.1;locus_tag=C9E97_RS07880;product=acyl-CoA thioesterase II;protein_id=WP_000084176.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	23898	25184	.	-	.	ID=gene-C9E97_RS07885;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=C9E97_RS07885;old_locus_tag=C9E97_08070
NZ_PYKA01000058.1	Protein Homology	CDS	23898	25184	.	-	0	ID=cds-WP_023137940.1;Parent=gene-C9E97_RS07885;Dbxref=GenBank:WP_023137940.1;Name=WP_023137940.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459459.1;locus_tag=C9E97_RS07885;product=ammonium transporter AmtB;protein_id=WP_023137940.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	25216	25554	.	-	.	ID=gene-C9E97_RS07890;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=C9E97_RS07890;old_locus_tag=C9E97_08075
NZ_PYKA01000058.1	Protein Homology	CDS	25216	25554	.	-	0	ID=cds-WP_000780341.1;Parent=gene-C9E97_RS07890;Dbxref=GenBank:WP_000780341.1;Name=WP_000780341.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459458.1;locus_tag=C9E97_RS07890;product=P-II family nitrogen regulator;protein_id=WP_000780341.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	25767	27548	.	-	.	ID=gene-C9E97_RS07895;Name=C9E97_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07895;old_locus_tag=C9E97_08080
NZ_PYKA01000058.1	Protein Homology	CDS	25767	27548	.	-	0	ID=cds-WP_001256071.1;Parent=gene-C9E97_RS07895;Dbxref=GenBank:WP_001256071.1;Name=WP_001256071.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459457.1;locus_tag=C9E97_RS07895;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_001256071.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	27541	29313	.	-	.	ID=gene-C9E97_RS07900;Name=C9E97_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07900;old_locus_tag=C9E97_08085
NZ_PYKA01000058.1	Protein Homology	CDS	27541	29313	.	-	0	ID=cds-WP_001235559.1;Parent=gene-C9E97_RS07900;Dbxref=GenBank:WP_001235559.1;Name=WP_001235559.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459456.1;locus_tag=C9E97_RS07900;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_001235559.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	29354	29812	.	-	.	ID=gene-C9E97_RS07905;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=C9E97_RS07905;old_locus_tag=C9E97_08090
NZ_PYKA01000058.1	Protein Homology	CDS	29354	29812	.	-	0	ID=cds-WP_000884593.1;Parent=gene-C9E97_RS07905;Dbxref=GenBank:WP_000884593.1;Name=WP_000884593.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459455.1;locus_tag=C9E97_RS07905;product=DNA-binding transcriptional regulator DecR;protein_id=WP_000884593.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	29925	30980	.	+	.	ID=gene-C9E97_RS07910;Name=cdsH;gbkey=Gene;gene=cdsH;gene_biotype=protein_coding;locus_tag=C9E97_RS07910;old_locus_tag=C9E97_08095
NZ_PYKA01000058.1	Protein Homology	CDS	29925	30980	.	+	0	ID=cds-WP_000987850.1;Parent=gene-C9E97_RS07910;Dbxref=GenBank:WP_000987850.1;Name=WP_000987850.1;gbkey=CDS;gene=cdsH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459454.1;locus_tag=C9E97_RS07910;product=cysteine desulfhydrase;protein_id=WP_000987850.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	31030	31848	.	-	.	ID=gene-C9E97_RS07915;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=C9E97_RS07915;old_locus_tag=C9E97_08100
NZ_PYKA01000058.1	Protein Homology	CDS	31030	31848	.	-	0	ID=cds-WP_000113030.1;Parent=gene-C9E97_RS07915;Dbxref=GenBank:WP_000113030.1;Name=WP_000113030.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459453.1;locus_tag=C9E97_RS07915;product=HMP-PP phosphatase;protein_id=WP_000113030.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	31949	33658	.	+	.	ID=gene-C9E97_RS07920;Name=C9E97_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07920;old_locus_tag=C9E97_08105
NZ_PYKA01000058.1	Protein Homology	CDS	31949	33658	.	+	0	ID=cds-WP_135369700.1;Parent=gene-C9E97_RS07920;Dbxref=GenBank:WP_135369700.1;Name=WP_135369700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001238172.1;locus_tag=C9E97_RS07920;product=SgrR family transcriptional regulator;protein_id=WP_135369700.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	33723	34418	.	+	.	ID=gene-C9E97_RS07925;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=C9E97_RS07925;old_locus_tag=C9E97_08110
NZ_PYKA01000058.1	Protein Homology	CDS	33723	34418	.	+	0	ID=cds-WP_135369701.1;Parent=gene-C9E97_RS07925;Dbxref=GenBank:WP_135369701.1;Name=WP_135369701.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459451.1;locus_tag=C9E97_RS07925;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_135369701.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	34524	34922	.	-	.	ID=gene-C9E97_RS07930;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=C9E97_RS07930;old_locus_tag=C9E97_08115
NZ_PYKA01000058.1	Protein Homology	CDS	34524	34922	.	-	0	ID=cds-WP_001194543.1;Parent=gene-C9E97_RS07930;Dbxref=GenBank:WP_001194543.1;Name=WP_001194543.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459450.1;locus_tag=C9E97_RS07930;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194543.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	35026	35400	.	-	.	ID=gene-C9E97_RS07935;Name=C9E97_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07935;old_locus_tag=C9E97_08120
NZ_PYKA01000058.1	Protein Homology	CDS	35026	35400	.	-	0	ID=cds-WP_000680322.1;Parent=gene-C9E97_RS07935;Dbxref=GenBank:WP_000680322.1;Name=WP_000680322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459449.1;locus_tag=C9E97_RS07935;product=helix-hairpin-helix domain-containing protein;protein_id=WP_000680322.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	35550	37421	.	-	.	ID=gene-C9E97_RS07940;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=C9E97_RS07940;old_locus_tag=C9E97_08125
NZ_PYKA01000058.1	Protein Homology	CDS	35550	37421	.	-	0	ID=cds-WP_000969434.1;Parent=gene-C9E97_RS07940;Dbxref=GenBank:WP_000969434.1;Name=WP_000969434.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459448.1;locus_tag=C9E97_RS07940;product=peptidylprolyl isomerase;protein_id=WP_000969434.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	37712	38002	.	-	.	ID=gene-C9E97_RS07945;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=C9E97_RS07945;old_locus_tag=C9E97_08130
NZ_PYKA01000058.1	Protein Homology	CDS	37712	38002	.	-	0	ID=cds-WP_254888479.1;Parent=gene-C9E97_RS07945;Dbxref=GenBank:WP_254888479.1;Name=WP_254888479.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=C9E97_RS07945;product=nucleoid-associated protein HU-beta;protein_id=WP_254888479.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	38193	40547	.	-	.	ID=gene-C9E97_RS07950;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=C9E97_RS07950;old_locus_tag=C9E97_08135
NZ_PYKA01000058.1	Protein Homology	CDS	38193	40547	.	-	0	ID=cds-WP_001067723.1;Parent=gene-C9E97_RS07950;Dbxref=GenBank:WP_001067723.1;Name=WP_001067723.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=C9E97_RS07950;product=endopeptidase La;protein_id=WP_001067723.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	40733	42004	.	-	.	ID=gene-C9E97_RS07955;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=C9E97_RS07955;old_locus_tag=C9E97_08140
NZ_PYKA01000058.1	Protein Homology	CDS	40733	42004	.	-	0	ID=cds-WP_000130314.1;Parent=gene-C9E97_RS07955;Dbxref=GenBank:WP_000130314.1;Name=WP_000130314.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=C9E97_RS07955;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_000130314.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	42256	42879	.	-	.	ID=gene-C9E97_RS07960;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=C9E97_RS07960;old_locus_tag=C9E97_08145
NZ_PYKA01000058.1	Protein Homology	CDS	42256	42879	.	-	0	ID=cds-WP_000122257.1;Parent=gene-C9E97_RS07960;Dbxref=GenBank:WP_000122257.1;Name=WP_000122257.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=C9E97_RS07960;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_000122257.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	43126	44424	.	-	.	ID=gene-C9E97_RS07965;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=C9E97_RS07965;old_locus_tag=C9E97_08150
NZ_PYKA01000058.1	Protein Homology	CDS	43126	44424	.	-	0	ID=cds-WP_001198403.1;Parent=gene-C9E97_RS07965;Dbxref=GenBank:WP_001198403.1;Name=WP_001198403.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=C9E97_RS07965;product=trigger factor;protein_id=WP_001198403.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	44771	45088	.	-	.	ID=gene-C9E97_RS07975;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=C9E97_RS07975;old_locus_tag=C9E97_08160
NZ_PYKA01000058.1	Protein Homology	CDS	44771	45088	.	-	0	ID=cds-WP_000973433.1;Parent=gene-C9E97_RS07975;Dbxref=GenBank:WP_000973433.1;Name=WP_000973433.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459442.1;locus_tag=C9E97_RS07975;product=transcriptional regulator BolA;protein_id=WP_000973433.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	45392	45970	.	+	.	ID=gene-C9E97_RS07980;Name=C9E97_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07980;old_locus_tag=C9E97_08165
NZ_PYKA01000058.1	Protein Homology	CDS	45392	45970	.	+	0	ID=cds-WP_135369702.1;Parent=gene-C9E97_RS07980;Dbxref=GenBank:WP_135369702.1;Name=WP_135369702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225436.1;locus_tag=C9E97_RS07980;product=lipoprotein;protein_id=WP_135369702.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	46014	47489	.	+	.	ID=gene-C9E97_RS07985;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=C9E97_RS07985;old_locus_tag=C9E97_08170
NZ_PYKA01000058.1	Protein Homology	CDS	46014	47489	.	+	0	ID=cds-WP_000098473.1;Parent=gene-C9E97_RS07985;Dbxref=GenBank:WP_000098473.1;Name=WP_000098473.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459440.1;locus_tag=C9E97_RS07985;product=muropeptide MFS transporter AmpG;protein_id=WP_000098473.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	47942	48898	.	+	.	ID=gene-C9E97_RS07990;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=C9E97_RS07990;old_locus_tag=C9E97_08175
NZ_PYKA01000058.1	Protein Homology	CDS	47942	48898	.	+	0	ID=cds-WP_001239449.1;Parent=gene-C9E97_RS07990;Dbxref=GenBank:WP_001239449.1;Name=WP_001239449.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459439.1;locus_tag=C9E97_RS07990;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_001239449.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	48909	50900	.	+	.	ID=gene-C9E97_RS07995;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=C9E97_RS07995;old_locus_tag=C9E97_08180
NZ_PYKA01000058.1	Protein Homology	CDS	48909	50900	.	+	0	ID=cds-WP_000467158.1;Parent=gene-C9E97_RS07995;Dbxref=GenBank:WP_000467158.1;Name=WP_000467158.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=C9E97_RS07995;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_000467158.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	50890	51504	.	+	.	ID=gene-C9E97_RS08000;Name=C9E97_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08000;old_locus_tag=C9E97_08185
NZ_PYKA01000058.1	Protein Homology	CDS	50890	51504	.	+	0	ID=cds-WP_000179833.1;Parent=gene-C9E97_RS08000;Dbxref=GenBank:WP_000179833.1;Name=WP_000179833.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459437.1;locus_tag=C9E97_RS08000;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_000179833.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	51504	51833	.	+	.	ID=gene-C9E97_RS08005;Name=C9E97_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08005;old_locus_tag=C9E97_08190
NZ_PYKA01000058.1	Protein Homology	CDS	51504	51833	.	+	0	ID=cds-WP_000019878.1;Parent=gene-C9E97_RS08005;Dbxref=GenBank:WP_000019878.1;Name=WP_000019878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459436.1;locus_tag=C9E97_RS08005;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_000019878.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	51845	52735	.	+	.	ID=gene-C9E97_RS08010;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=C9E97_RS08010;old_locus_tag=C9E97_08195
NZ_PYKA01000058.1	Protein Homology	CDS	51845	52735	.	+	0	ID=cds-WP_000971352.1;Parent=gene-C9E97_RS08010;Dbxref=GenBank:WP_000971352.1;Name=WP_000971352.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459435.1;locus_tag=C9E97_RS08010;product=heme o synthase;protein_id=WP_000971352.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	52817	54310	.	-	.	ID=gene-C9E97_RS08015;Name=C9E97_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08015;old_locus_tag=C9E97_08200
NZ_PYKA01000058.1	Protein Homology	CDS	52817	54310	.	-	0	ID=cds-WP_000595930.1;Parent=gene-C9E97_RS08015;Dbxref=GenBank:WP_000595930.1;Name=WP_000595930.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595936.1;locus_tag=C9E97_RS08015;product=tetratricopeptide repeat protein;protein_id=WP_000595930.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	54322	55833	.	-	.	ID=gene-C9E97_RS08020;Name=C9E97_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08020;old_locus_tag=C9E97_08205
NZ_PYKA01000058.1	Protein Homology	CDS	54322	55833	.	-	0	ID=cds-WP_135421029.1;Parent=gene-C9E97_RS08020;Dbxref=GenBank:WP_135421029.1;Name=WP_135421029.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459433.1;locus_tag=C9E97_RS08020;product=SEL1-like repeat protein;protein_id=WP_135421029.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	pseudogene	56008	56139	.	+	.	ID=gene-C9E97_RS23700;Name=C9E97_RS23700;end_range=56139,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23700;partial=true;pseudo=true
NZ_PYKA01000058.1	Protein Homology	CDS	56008	56139	.	+	0	ID=cds-C9E97_RS23700;Parent=gene-C9E97_RS23700;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=56139,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032491235.1;locus_tag=C9E97_RS23700;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	56370	57734	.	+	.	ID=gene-C9E97_RS08025;Name=C9E97_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08025;old_locus_tag=C9E97_08210
NZ_PYKA01000058.1	Protein Homology	CDS	56370	57734	.	+	0	ID=cds-WP_001000938.1;Parent=gene-C9E97_RS08025;Dbxref=GenBank:WP_001000938.1;Name=WP_001000938.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507029.1;locus_tag=C9E97_RS08025;product=MFS transporter;protein_id=WP_001000938.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	57781	58272	.	-	.	ID=gene-C9E97_RS08030;Name=C9E97_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08030;old_locus_tag=C9E97_08215
NZ_PYKA01000058.1	Protein Homology	CDS	57781	58272	.	-	0	ID=cds-WP_001138913.1;Parent=gene-C9E97_RS08030;Dbxref=GenBank:WP_001138913.1;Name=WP_001138913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=C9E97_RS08030;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_001138913.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	58398	59309	.	+	.	ID=gene-C9E97_RS08035;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=C9E97_RS08035;old_locus_tag=C9E97_08220
NZ_PYKA01000058.1	Protein Homology	CDS	58398	59309	.	+	0	ID=cds-WP_000705816.1;Parent=gene-C9E97_RS08035;Dbxref=GenBank:WP_000705816.1;Name=WP_000705816.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459429.1;locus_tag=C9E97_RS08035;product=2-dehydropantoate 2-reductase;protein_id=WP_000705816.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	59272	59862	.	+	.	ID=gene-C9E97_RS08040;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=C9E97_RS08040;old_locus_tag=C9E97_08225
NZ_PYKA01000058.1	Protein Homology	CDS	59272	59862	.	+	0	ID=cds-WP_001275809.1;Parent=gene-C9E97_RS08040;Dbxref=GenBank:WP_001275809.1;Name=WP_001275809.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459428.1;locus_tag=C9E97_RS08040;product=protein deglycase YajL;protein_id=WP_001275809.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	pseudogene	59871	59953	.	-	.	ID=gene-C9E97_RS24050;Name=C9E97_RS24050;end_range=59953,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS24050;partial=true;pseudo=true;start_range=.,59871
NZ_PYKA01000058.1	Protein Homology	CDS	59871	59953	.	-	0	ID=cds-C9E97_RS24050;Parent=gene-C9E97_RS24050;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=59953,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=C9E97_RS24050;partial=true;product=hypothetical protein;pseudo=true;start_range=.,59871;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	59959	60768	.	-	.	ID=gene-C9E97_RS08045;Name=phnX;gbkey=Gene;gene=phnX;gene_biotype=protein_coding;locus_tag=C9E97_RS08045;old_locus_tag=C9E97_08230
NZ_PYKA01000058.1	Protein Homology	CDS	59959	60768	.	-	0	ID=cds-WP_135369271.1;Parent=gene-C9E97_RS08045;Dbxref=GenBank:WP_135369271.1;Name=WP_135369271.1;Ontology_term=GO:0019700,GO:0050194;gbkey=CDS;gene=phnX;go_function=phosphonoacetaldehyde hydrolase activity|0050194||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229535.1;locus_tag=C9E97_RS08045;product=phosphonoacetaldehyde hydrolase;protein_id=WP_135369271.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	60778	61881	.	-	.	ID=gene-C9E97_RS08050;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=protein_coding;locus_tag=C9E97_RS08050;old_locus_tag=C9E97_08235
NZ_PYKA01000058.1	Protein Homology	CDS	60778	61881	.	-	0	ID=cds-WP_023182335.1;Parent=gene-C9E97_RS08050;Dbxref=GenBank:WP_023182335.1;Name=WP_023182335.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;gene=phnW;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459426.1;locus_tag=C9E97_RS08050;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_023182335.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	62021	62740	.	+	.	ID=gene-C9E97_RS08055;Name=phnR;gbkey=Gene;gene=phnR;gene_biotype=protein_coding;locus_tag=C9E97_RS08055;old_locus_tag=C9E97_08240
NZ_PYKA01000058.1	Protein Homology	CDS	62021	62740	.	+	0	ID=cds-WP_000836268.1;Parent=gene-C9E97_RS08055;Dbxref=GenBank:WP_000836268.1;Name=WP_000836268.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=phnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459425.1;locus_tag=C9E97_RS08055;product=phosphonate utilization transcriptional regulator PhnR;protein_id=WP_000836268.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	62938	63951	.	+	.	ID=gene-C9E97_RS08060;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=C9E97_RS08060;old_locus_tag=C9E97_08245
NZ_PYKA01000058.1	Protein Homology	CDS	62938	63951	.	+	0	ID=cds-WP_079987327.1;Parent=gene-C9E97_RS08060;Dbxref=GenBank:WP_079987327.1;Name=WP_079987327.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=phnS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459424.1;locus_tag=C9E97_RS08060;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WP_079987327.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	63957	65066	.	+	.	ID=gene-C9E97_RS08065;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=C9E97_RS08065;old_locus_tag=C9E97_08250
NZ_PYKA01000058.1	Protein Homology	CDS	63957	65066	.	+	0	ID=cds-WP_001527281.1;Parent=gene-C9E97_RS08065;Dbxref=GenBank:WP_001527281.1;Name=WP_001527281.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;gene=phnT;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459423.1;locus_tag=C9E97_RS08065;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WP_001527281.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	65069	65929	.	+	.	ID=gene-C9E97_RS08070;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=protein_coding;locus_tag=C9E97_RS08070;old_locus_tag=C9E97_08255
NZ_PYKA01000058.1	Protein Homology	CDS	65069	65929	.	+	0	ID=cds-WP_079987328.1;Parent=gene-C9E97_RS08070;Dbxref=GenBank:WP_079987328.1;Name=WP_079987328.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnU;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459422.1;locus_tag=C9E97_RS08070;product=2-aminoethylphosphonate ABC transporter permease subunit;protein_id=WP_079987328.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	65932	66729	.	+	.	ID=gene-C9E97_RS08075;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=C9E97_RS08075;old_locus_tag=C9E97_08260
NZ_PYKA01000058.1	Protein Homology	CDS	65932	66729	.	+	0	ID=cds-WP_000909791.1;Parent=gene-C9E97_RS08075;Dbxref=GenBank:WP_000909791.1;Name=WP_000909791.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnV;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459421.1;locus_tag=C9E97_RS08075;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=WP_000909791.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	66773	68221	.	-	.	ID=gene-C9E97_RS08080;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=C9E97_RS08080;old_locus_tag=C9E97_08265
NZ_PYKA01000058.1	Protein Homology	CDS	66773	68221	.	-	0	ID=cds-WP_000668652.1;Parent=gene-C9E97_RS08080;Dbxref=GenBank:WP_000668652.1;Name=WP_000668652.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=C9E97_RS08080;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_000668652.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	68431	68673	.	+	.	ID=gene-C9E97_RS08085;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=C9E97_RS08085;old_locus_tag=C9E97_08270
NZ_PYKA01000058.1	Protein Homology	CDS	68431	68673	.	+	0	ID=cds-WP_001124944.1;Parent=gene-C9E97_RS08085;Dbxref=GenBank:WP_001124944.1;Name=WP_001124944.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459419.1;locus_tag=C9E97_RS08085;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001124944.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	68674	69573	.	+	.	ID=gene-C9E97_RS08090;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=C9E97_RS08090;old_locus_tag=C9E97_08275
NZ_PYKA01000058.1	Protein Homology	CDS	68674	69573	.	+	0	ID=cds-WP_000348074.1;Parent=gene-C9E97_RS08090;Dbxref=GenBank:WP_000348074.1;Name=WP_000348074.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459418.1;locus_tag=C9E97_RS08090;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_000348074.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	69597	71459	.	+	.	ID=gene-C9E97_RS08095;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=C9E97_RS08095;old_locus_tag=C9E97_08280
NZ_PYKA01000058.1	Protein Homology	CDS	69597	71459	.	+	0	ID=cds-WP_000006777.1;Parent=gene-C9E97_RS08095;Dbxref=GenBank:WP_000006777.1;Name=WP_000006777.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459417.1;locus_tag=C9E97_RS08095;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_000006777.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	71516	72490	.	+	.	ID=gene-C9E97_RS08100;Name=C9E97_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08100;old_locus_tag=C9E97_08285
NZ_PYKA01000058.1	Protein Homology	CDS	71516	72490	.	+	0	ID=cds-WP_001199858.1;Parent=gene-C9E97_RS08100;Dbxref=GenBank:WP_001199858.1;Name=WP_001199858.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459416.1;locus_tag=C9E97_RS08100;product=aldo/keto reductase;protein_id=WP_001199858.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	72594	73109	.	-	.	ID=gene-C9E97_RS08105;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=C9E97_RS08105;old_locus_tag=C9E97_08290
NZ_PYKA01000058.1	Protein Homology	CDS	72594	73109	.	-	0	ID=cds-WP_000154063.1;Parent=gene-C9E97_RS08105;Dbxref=GenBank:WP_000154063.1;Name=WP_000154063.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459415.1;locus_tag=C9E97_RS08105;product=phosphatidylglycerophosphatase A;protein_id=WP_000154063.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	73087	74067	.	-	.	ID=gene-C9E97_RS08110;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=C9E97_RS08110;old_locus_tag=C9E97_08295
NZ_PYKA01000058.1	Protein Homology	CDS	73087	74067	.	-	0	ID=cds-WP_000742082.1;Parent=gene-C9E97_RS08110;Dbxref=GenBank:WP_000742082.1;Name=WP_000742082.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308497.1;locus_tag=C9E97_RS08110;product=thiamine-phosphate kinase;protein_id=WP_000742082.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	74146	74565	.	-	.	ID=gene-C9E97_RS08115;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=C9E97_RS08115;old_locus_tag=C9E97_08300
NZ_PYKA01000058.1	Protein Homology	CDS	74146	74565	.	-	0	ID=cds-WP_000801129.1;Parent=gene-C9E97_RS08115;Dbxref=GenBank:WP_000801129.1;Name=WP_000801129.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459413.1;locus_tag=C9E97_RS08115;product=transcription antitermination factor NusB;protein_id=WP_000801129.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	74586	75056	.	-	.	ID=gene-C9E97_RS08120;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=C9E97_RS08120;old_locus_tag=C9E97_08305
NZ_PYKA01000058.1	Protein Homology	CDS	74586	75056	.	-	0	ID=cds-WP_001021373.1;Parent=gene-C9E97_RS08120;Dbxref=GenBank:WP_001021373.1;Name=WP_001021373.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=C9E97_RS08120;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021373.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	75145	76248	.	-	.	ID=gene-C9E97_RS08125;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=C9E97_RS08125;old_locus_tag=C9E97_08310
NZ_PYKA01000058.1	Protein Homology	CDS	75145	76248	.	-	0	ID=cds-WP_001150216.1;Parent=gene-C9E97_RS08125;Dbxref=GenBank:WP_001150216.1;Name=WP_001150216.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459411.1;locus_tag=C9E97_RS08125;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_001150216.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	76252	76701	.	-	.	ID=gene-C9E97_RS08130;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=C9E97_RS08130;old_locus_tag=C9E97_08315
NZ_PYKA01000058.1	Protein Homology	CDS	76252	76701	.	-	0	ID=cds-WP_000543533.1;Parent=gene-C9E97_RS08130;Dbxref=GenBank:WP_000543533.1;Name=WP_000543533.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=C9E97_RS08130;product=transcriptional regulator NrdR;protein_id=WP_000543533.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	76853	77392	.	+	.	ID=gene-C9E97_RS08135;Name=C9E97_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08135;old_locus_tag=C9E97_08320
NZ_PYKA01000058.1	Protein Homology	CDS	76853	77392	.	+	0	ID=cds-WP_000198484.1;Parent=gene-C9E97_RS08135;Dbxref=GenBank:WP_000198484.1;Name=WP_000198484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459409.1;locus_tag=C9E97_RS08135;product=DUF3251 domain-containing protein;protein_id=WP_000198484.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	77692	78555	.	+	.	ID=gene-C9E97_RS08140;Name=C9E97_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08140;old_locus_tag=C9E97_08325
NZ_PYKA01000058.1	Protein Homology	CDS	77692	78555	.	+	0	ID=cds-WP_079987331.1;Parent=gene-C9E97_RS08140;Dbxref=GenBank:WP_079987331.1;Name=WP_079987331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459408.1;locus_tag=C9E97_RS08140;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_079987331.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	78639	78746	.	-	.	ID=gene-C9E97_RS23970;Name=C9E97_RS23970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23970
NZ_PYKA01000058.1	Protein Homology	CDS	78639	78746	.	-	0	ID=cds-WP_000176312.1;Parent=gene-C9E97_RS23970;Dbxref=GenBank:WP_000176312.1;Name=WP_000176312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000176312.1;locus_tag=C9E97_RS23970;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000176312.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	79184	79531	.	-	.	ID=gene-C9E97_RS08155;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=C9E97_RS08155;old_locus_tag=C9E97_08340
NZ_PYKA01000058.1	Protein Homology	CDS	79184	79531	.	-	0	ID=cds-WP_000974818.1;Parent=gene-C9E97_RS08155;Dbxref=GenBank:WP_000974818.1;Name=WP_000974818.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459406.1;locus_tag=C9E97_RS08155;product=HNH nuclease YajD;protein_id=WP_000974818.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	79625	80596	.	-	.	ID=gene-C9E97_RS08160;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=C9E97_RS08160;old_locus_tag=C9E97_08345
NZ_PYKA01000058.1	Protein Homology	CDS	79625	80596	.	-	0	ID=cds-WP_000046629.1;Parent=gene-C9E97_RS08160;Dbxref=GenBank:WP_000046629.1;Name=WP_000046629.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459403.1;locus_tag=C9E97_RS08160;product=protein translocase subunit SecF;protein_id=WP_000046629.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	80607	82454	.	-	.	ID=gene-C9E97_RS08165;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=C9E97_RS08165;old_locus_tag=C9E97_08350
NZ_PYKA01000058.1	Protein Homology	CDS	80607	82454	.	-	0	ID=cds-WP_000934811.1;Parent=gene-C9E97_RS08165;Dbxref=GenBank:WP_000934811.1;Name=WP_000934811.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=C9E97_RS08165;product=protein translocase subunit SecD;protein_id=WP_000934811.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	82482	82814	.	-	.	ID=gene-C9E97_RS08170;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=C9E97_RS08170;old_locus_tag=C9E97_08355
NZ_PYKA01000058.1	Protein Homology	CDS	82482	82814	.	-	0	ID=cds-WP_000007628.1;Parent=gene-C9E97_RS08170;Dbxref=GenBank:WP_000007628.1;Name=WP_000007628.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=C9E97_RS08170;product=preprotein translocase subunit YajC;protein_id=WP_000007628.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	82837	83964	.	-	.	ID=gene-C9E97_RS08175;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=C9E97_RS08175;old_locus_tag=C9E97_08360
NZ_PYKA01000058.1	Protein Homology	CDS	82837	83964	.	-	0	ID=cds-WP_000667302.1;Parent=gene-C9E97_RS08175;Dbxref=GenBank:WP_000667302.1;Name=WP_000667302.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=C9E97_RS08175;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_000667302.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	84161	85225	.	-	.	ID=gene-C9E97_RS08180;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=C9E97_RS08180;old_locus_tag=C9E97_08370
NZ_PYKA01000058.1	Protein Homology	CDS	84161	85225	.	-	0	ID=cds-WP_001266530.1;Parent=gene-C9E97_RS08180;Dbxref=GenBank:WP_001266530.1;Name=WP_001266530.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459399.1;locus_tag=C9E97_RS08180;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001266530.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	85319	85900	.	+	.	ID=gene-C9E97_RS08185;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=C9E97_RS08185;old_locus_tag=C9E97_08375
NZ_PYKA01000058.1	Protein Homology	CDS	85319	85900	.	+	0	ID=cds-WP_001009858.1;Parent=gene-C9E97_RS08185;Dbxref=GenBank:WP_001009858.1;Name=WP_001009858.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459398.1;locus_tag=C9E97_RS08185;product=ACP phosphodiesterase;protein_id=WP_001009858.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	86110	86712	.	+	.	ID=gene-C9E97_RS08190;Name=C9E97_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08190;old_locus_tag=C9E97_08380
NZ_PYKA01000058.1	Protein Homology	CDS	86110	86712	.	+	0	ID=cds-WP_000244731.1;Parent=gene-C9E97_RS08190;Dbxref=GenBank:WP_000244731.1;Name=WP_000244731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459397.1;locus_tag=C9E97_RS08190;product=peroxiredoxin;protein_id=WP_000244731.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	86784	88601	.	-	.	ID=gene-C9E97_RS08195;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=C9E97_RS08195;old_locus_tag=C9E97_08385
NZ_PYKA01000058.1	Protein Homology	CDS	86784	88601	.	-	0	ID=cds-WP_064043206.1;Parent=gene-C9E97_RS08195;Dbxref=GenBank:WP_064043206.1;Name=WP_064043206.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459396.1;locus_tag=C9E97_RS08195;product=maltodextrin glucosidase;protein_id=WP_064043206.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	88763	90133	.	-	.	ID=gene-C9E97_RS08200;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=C9E97_RS08200;old_locus_tag=C9E97_08390
NZ_PYKA01000058.1	Protein Homology	CDS	88763	90133	.	-	0	ID=cds-WP_001537837.1;Parent=gene-C9E97_RS08200;Dbxref=GenBank:WP_001537837.1;Name=WP_001537837.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459395.1;locus_tag=C9E97_RS08200;product=proline-specific permease ProY;protein_id=WP_001537837.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	90208	91527	.	-	.	ID=gene-C9E97_RS08205;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=C9E97_RS08205;old_locus_tag=C9E97_08395
NZ_PYKA01000058.1	Protein Homology	CDS	90208	91527	.	-	0	ID=cds-WP_000149625.1;Parent=gene-C9E97_RS08205;Dbxref=GenBank:WP_000149625.1;Name=WP_000149625.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459394.1;locus_tag=C9E97_RS08205;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_000149625.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	91936	93231	.	-	.	ID=gene-C9E97_RS08210;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=C9E97_RS08210;old_locus_tag=C9E97_08400
NZ_PYKA01000058.1	Protein Homology	CDS	91936	93231	.	-	0	ID=cds-WP_000893642.1;Parent=gene-C9E97_RS08210;Dbxref=GenBank:WP_000893642.1;Name=WP_000893642.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459393.1;locus_tag=C9E97_RS08210;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_000893642.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	93301	93990	.	-	.	ID=gene-C9E97_RS08215;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=C9E97_RS08215;old_locus_tag=C9E97_08405
NZ_PYKA01000058.1	Protein Homology	CDS	93301	93990	.	-	0	ID=cds-WP_000113918.1;Parent=gene-C9E97_RS08215;Dbxref=GenBank:WP_000113918.1;Name=WP_000113918.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=C9E97_RS08215;product=phosphate response regulator transcription factor PhoB;protein_id=WP_000113918.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	94205	95407	.	+	.	ID=gene-C9E97_RS08220;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=C9E97_RS08220;old_locus_tag=C9E97_08410
NZ_PYKA01000058.1	Protein Homology	CDS	94205	95407	.	+	0	ID=cds-WP_135369266.1;Parent=gene-C9E97_RS08220;Dbxref=GenBank:WP_135369266.1;Name=WP_135369266.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459391.1;locus_tag=C9E97_RS08220;product=exonuclease subunit SbcD;protein_id=WP_135369266.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	95404	98544	.	+	.	ID=gene-C9E97_RS08225;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=C9E97_RS08225;old_locus_tag=C9E97_08415
NZ_PYKA01000058.1	Protein Homology	CDS	95404	98544	.	+	0	ID=cds-WP_135369267.1;Parent=gene-C9E97_RS08225;Dbxref=GenBank:WP_135369267.1;Name=WP_135369267.1;Ontology_term=GO:0006260,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459390.1;locus_tag=C9E97_RS08225;product=exonuclease subunit SbcC;protein_id=WP_135369267.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	98716	99888	.	+	.	ID=gene-C9E97_RS08230;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=C9E97_RS08230;old_locus_tag=C9E97_08420
NZ_PYKA01000058.1	Protein Homology	CDS	98716	99888	.	+	0	ID=cds-WP_135369268.1;Parent=gene-C9E97_RS08230;Dbxref=GenBank:WP_135369268.1;Name=WP_135369268.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459389.1;locus_tag=C9E97_RS08230;product=MFS transporter AraJ;protein_id=WP_135369268.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	99908	100816	.	-	.	ID=gene-C9E97_RS08235;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=C9E97_RS08235;old_locus_tag=C9E97_08425
NZ_PYKA01000058.1	Protein Homology	CDS	99908	100816	.	-	0	ID=cds-WP_001219277.1;Parent=gene-C9E97_RS08235;Dbxref=GenBank:WP_001219277.1;Name=WP_001219277.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459388.1;locus_tag=C9E97_RS08235;product=fructokinase;protein_id=WP_001219277.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	100942	101853	.	+	.	ID=gene-C9E97_RS08240;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=C9E97_RS08240;old_locus_tag=C9E97_08430
NZ_PYKA01000058.1	Protein Homology	CDS	100942	101853	.	+	0	ID=cds-WP_000964305.1;Parent=gene-C9E97_RS08240;Dbxref=GenBank:WP_000964305.1;Name=WP_000964305.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=C9E97_RS08240;product=recombination-associated protein RdgC;protein_id=WP_000964305.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	101891	102175	.	-	.	ID=gene-C9E97_RS08245;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=C9E97_RS08245;old_locus_tag=C9E97_08435
NZ_PYKA01000058.1	Protein Homology	CDS	101891	102175	.	-	0	ID=cds-WP_000941953.1;Parent=gene-C9E97_RS08245;Dbxref=GenBank:WP_000941953.1;Name=WP_000941953.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459386.1;locus_tag=C9E97_RS08245;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_000941953.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	102246	102923	.	-	.	ID=gene-C9E97_RS08250;Name=C9E97_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08250;old_locus_tag=C9E97_08440
NZ_PYKA01000058.1	Protein Homology	CDS	102246	102923	.	-	0	ID=cds-WP_001276437.1;Parent=gene-C9E97_RS08250;Dbxref=GenBank:WP_001276437.1;Name=WP_001276437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459385.1;locus_tag=C9E97_RS08250;product=AroM family protein;protein_id=WP_001276437.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	103174	103365	.	-	.	ID=gene-C9E97_RS08255;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=C9E97_RS08255;old_locus_tag=C9E97_08445
NZ_PYKA01000058.1	Protein Homology	CDS	103174	103365	.	-	0	ID=cds-WP_001143161.1;Parent=gene-C9E97_RS08255;Dbxref=GenBank:WP_001143161.1;Name=WP_001143161.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459384.1;locus_tag=C9E97_RS08255;product=protein YaiA;protein_id=WP_001143161.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	103392	103937	.	-	.	ID=gene-C9E97_RS08260;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=C9E97_RS08260;old_locus_tag=C9E97_08450
NZ_PYKA01000058.1	Protein Homology	CDS	103392	103937	.	-	0	ID=cds-WP_000983569.1;Parent=gene-C9E97_RS08260;Dbxref=GenBank:WP_000983569.1;Name=WP_000983569.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459383.1;locus_tag=C9E97_RS08260;product=shikimate kinase AroL;protein_id=WP_000983569.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	104122	104577	.	-	.	ID=gene-C9E97_RS08265;Name=C9E97_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08265;old_locus_tag=C9E97_08455
NZ_PYKA01000058.1	Protein Homology	CDS	104122	104577	.	-	0	ID=cds-WP_000158137.1;Parent=gene-C9E97_RS08265;Dbxref=GenBank:WP_000158137.1;Name=WP_000158137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459382.1;locus_tag=C9E97_RS08265;product=YaiI/YqxD family protein;protein_id=WP_000158137.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	104717	105526	.	+	.	ID=gene-C9E97_RS08270;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=C9E97_RS08270;old_locus_tag=C9E97_08460
NZ_PYKA01000058.1	Protein Homology	CDS	104717	105526	.	+	0	ID=cds-WP_000412193.1;Parent=gene-C9E97_RS08270;Dbxref=GenBank:WP_000412193.1;Name=WP_000412193.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459381.1;locus_tag=C9E97_RS08270;product=pyrroline-5-carboxylate reductase;protein_id=WP_000412193.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	105541	106653	.	-	.	ID=gene-C9E97_RS08275;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=C9E97_RS08275;old_locus_tag=C9E97_08465
NZ_PYKA01000058.1	Protein Homology	CDS	105541	106653	.	-	0	ID=cds-WP_080085919.1;Parent=gene-C9E97_RS08275;Dbxref=GenBank:WP_080085919.1;Name=WP_080085919.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459380.1;locus_tag=C9E97_RS08275;product=diguanylate cyclase AdrA;protein_id=WP_080085919.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	106745	107065	.	-	.	ID=gene-C9E97_RS08280;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=C9E97_RS08280;old_locus_tag=C9E97_08470
NZ_PYKA01000058.1	Protein Homology	CDS	106745	107065	.	-	0	ID=cds-WP_000705165.1;Parent=gene-C9E97_RS08280;Dbxref=GenBank:WP_000705165.1;Name=WP_000705165.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459379.1;locus_tag=C9E97_RS08280;product=phosphate starvation-inducible protein PsiF;protein_id=WP_000705165.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	107414	107674	.	-	.	ID=gene-C9E97_RS08285;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=C9E97_RS08285;old_locus_tag=C9E97_08475
NZ_PYKA01000058.1	Protein Homology	CDS	107414	107674	.	-	0	ID=cds-WP_001518423.1;Parent=gene-C9E97_RS08285;Dbxref=GenBank:WP_001518423.1;Name=WP_001518423.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748986.1;locus_tag=C9E97_RS08285;product=anti-adapter protein IraP;protein_id=WP_001518423.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	107971	109182	.	-	.	ID=gene-C9E97_RS08290;Name=C9E97_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08290;old_locus_tag=C9E97_08480
NZ_PYKA01000058.1	Protein Homology	CDS	107971	109182	.	-	0	ID=cds-WP_000446768.1;Parent=gene-C9E97_RS08290;Dbxref=GenBank:WP_000446768.1;Name=WP_000446768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459377.1;locus_tag=C9E97_RS08290;product=multidrug efflux MFS transporter;protein_id=WP_000446768.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	109351	110064	.	-	.	ID=gene-C9E97_RS08295;Name=C9E97_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08295;old_locus_tag=C9E97_08485
NZ_PYKA01000058.1	Protein Homology	CDS	109351	110064	.	-	0	ID=cds-WP_000480794.1;Parent=gene-C9E97_RS08295;Dbxref=GenBank:WP_000480794.1;Name=WP_000480794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459376.1;locus_tag=C9E97_RS08295;product=extensin-like domain-containing protein;protein_id=WP_000480794.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	110142	111236	.	+	.	ID=gene-C9E97_RS08300;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=C9E97_RS08300;old_locus_tag=C9E97_08490
NZ_PYKA01000058.1	Protein Homology	CDS	110142	111236	.	+	0	ID=cds-WP_001096593.1;Parent=gene-C9E97_RS08300;Dbxref=GenBank:WP_001096593.1;Name=WP_001096593.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459375.1;locus_tag=C9E97_RS08300;product=D-alanine--D-alanine ligase;protein_id=WP_001096593.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	111262	111477	.	-	.	ID=gene-C9E97_RS08305;Name=C9E97_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08305;old_locus_tag=C9E97_08495
NZ_PYKA01000058.1	Protein Homology	CDS	111262	111477	.	-	0	ID=cds-WP_001239240.1;Parent=gene-C9E97_RS08305;Dbxref=GenBank:WP_001239240.1;Name=WP_001239240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459374.1;locus_tag=C9E97_RS08305;product=DUF2754 family protein;protein_id=WP_001239240.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	111745	112053	.	+	.	ID=gene-C9E97_RS08310;Name=C9E97_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08310;old_locus_tag=C9E97_08500
NZ_PYKA01000058.1	Protein Homology	CDS	111745	112053	.	+	0	ID=cds-WP_000763139.1;Parent=gene-C9E97_RS08310;Dbxref=GenBank:WP_000763139.1;Name=WP_000763139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459373.1;locus_tag=C9E97_RS08310;product=YaiY family protein;protein_id=WP_000763139.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	112091	113185	.	-	.	ID=gene-C9E97_RS08315;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=C9E97_RS08315;old_locus_tag=C9E97_08505
NZ_PYKA01000058.1	Protein Homology	CDS	112091	113185	.	-	0	ID=cds-WP_001271421.1;Parent=gene-C9E97_RS08315;Dbxref=GenBank:WP_001271421.1;Name=WP_001271421.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459372.1;locus_tag=C9E97_RS08315;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WP_001271421.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	113200	114420	.	-	.	ID=gene-C9E97_RS08320;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=C9E97_RS08320;old_locus_tag=C9E97_08510
NZ_PYKA01000058.1	Protein Homology	CDS	113200	114420	.	-	0	ID=cds-WP_000477023.1;Parent=gene-C9E97_RS08320;Dbxref=GenBank:WP_000477023.1;Name=WP_000477023.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459371.1;locus_tag=C9E97_RS08320;product=peptide antibiotic transporter SbmA;protein_id=WP_000477023.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	114767	115924	.	+	.	ID=gene-C9E97_RS08330;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=C9E97_RS08330;old_locus_tag=C9E97_08520
NZ_PYKA01000058.1	Protein Homology	CDS	114767	115924	.	+	0	ID=cds-WP_000830785.1;Parent=gene-C9E97_RS08330;Dbxref=GenBank:WP_000830785.1;Name=WP_000830785.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=C9E97_RS08330;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_000830785.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	115969	116592	.	-	.	ID=gene-C9E97_RS08335;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=C9E97_RS08335;old_locus_tag=C9E97_08525
NZ_PYKA01000058.1	Protein Homology	CDS	115969	116592	.	-	0	ID=cds-WP_000950242.1;Parent=gene-C9E97_RS08335;Dbxref=GenBank:WP_000950242.1;Name=WP_000950242.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459369.1;locus_tag=C9E97_RS08335;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WP_000950242.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	116678	119617	.	-	.	ID=gene-C9E97_RS08340;Name=C9E97_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08340;old_locus_tag=C9E97_08530
NZ_PYKA01000058.1	Protein Homology	CDS	116678	119617	.	-	0	ID=cds-WP_135369269.1;Parent=gene-C9E97_RS08340;Dbxref=GenBank:WP_135369269.1;Name=WP_135369269.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459368.1;locus_tag=C9E97_RS08340;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_135369269.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	120130	121104	.	+	.	ID=gene-C9E97_RS08345;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=C9E97_RS08345;old_locus_tag=C9E97_08535
NZ_PYKA01000058.1	Protein Homology	CDS	120130	121104	.	+	0	ID=cds-WP_000130724.1;Parent=gene-C9E97_RS08345;Dbxref=GenBank:WP_000130724.1;Name=WP_000130724.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459367.1;locus_tag=C9E97_RS08345;product=porphobilinogen synthase;protein_id=WP_000130724.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	121208	123094	.	-	.	ID=gene-C9E97_RS08350;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=C9E97_RS08350;old_locus_tag=C9E97_08540
NZ_PYKA01000058.1	Protein Homology	CDS	121208	123094	.	-	0	ID=cds-WP_023258677.1;Parent=gene-C9E97_RS08350;Dbxref=GenBank:WP_023258677.1;Name=WP_023258677.1;Ontology_term=GO:0019629,GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459366.1;locus_tag=C9E97_RS08350;product=propionate--CoA ligase;protein_id=WP_023258677.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	123135	124586	.	-	.	ID=gene-C9E97_RS08355;Name=C9E97_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08355;old_locus_tag=C9E97_08545
NZ_PYKA01000058.1	Protein Homology	CDS	123135	124586	.	-	0	ID=cds-WP_080105456.1;Parent=gene-C9E97_RS08355;Dbxref=GenBank:WP_080105456.1;Name=WP_080105456.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459365.1;locus_tag=C9E97_RS08355;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WP_080105456.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	124624	125793	.	-	.	ID=gene-C9E97_RS08360;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=C9E97_RS08360;old_locus_tag=C9E97_08550
NZ_PYKA01000058.1	Protein Homology	CDS	124624	125793	.	-	0	ID=cds-WP_000132743.1;Parent=gene-C9E97_RS08360;Dbxref=GenBank:WP_000132743.1;Name=WP_000132743.1;Ontology_term=GO:0019679,GO:0004108,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate (Si)-synthase activity|0004108||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459364.1;locus_tag=C9E97_RS08360;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_000132743.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	125916	126803	.	-	.	ID=gene-C9E97_RS08365;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=C9E97_RS08365;old_locus_tag=C9E97_08555
NZ_PYKA01000058.1	Protein Homology	CDS	125916	126803	.	-	0	ID=cds-WP_000052229.1;Parent=gene-C9E97_RS08365;Dbxref=GenBank:WP_000052229.1;Name=WP_000052229.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459363.1;locus_tag=C9E97_RS08365;product=methylisocitrate lyase;protein_id=WP_000052229.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	127069	128694	.	+	.	ID=gene-C9E97_RS08370;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=C9E97_RS08370;old_locus_tag=C9E97_08560
NZ_PYKA01000058.1	Protein Homology	CDS	127069	128694	.	+	0	ID=cds-WP_135369140.1;Parent=gene-C9E97_RS08370;Dbxref=GenBank:WP_135369140.1;Name=WP_135369140.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459362.1;locus_tag=C9E97_RS08370;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_135369140.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	128830	129105	.	-	.	ID=gene-C9E97_RS08375;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=C9E97_RS08375;old_locus_tag=C9E97_08565
NZ_PYKA01000058.1	Protein Homology	CDS	128830	129105	.	-	0	ID=cds-WP_000848026.1;Parent=gene-C9E97_RS08375;Dbxref=GenBank:WP_000848026.1;Name=WP_000848026.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459361.1;locus_tag=C9E97_RS08375;product=DUF1471 family periplasmic protein YahO;protein_id=WP_000848026.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	129337	129969	.	+	.	ID=gene-C9E97_RS08380;Name=C9E97_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08380;old_locus_tag=C9E97_08570
NZ_PYKA01000058.1	Protein Homology	CDS	129337	129969	.	+	0	ID=cds-WP_000433131.1;Parent=gene-C9E97_RS08380;Dbxref=GenBank:WP_000433131.1;Name=WP_000433131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459360.1;locus_tag=C9E97_RS08380;product=LysE family transporter;protein_id=WP_000433131.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	130010	132118	.	-	.	ID=gene-C9E97_RS08385;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=C9E97_RS08385;old_locus_tag=C9E97_08575
NZ_PYKA01000058.1	Protein Homology	CDS	130010	132118	.	-	0	ID=cds-WP_106777674.1;Parent=gene-C9E97_RS08385;Dbxref=GenBank:WP_106777674.1;Name=WP_106777674.1;Ontology_term=GO:0015344,GO:0038023;gbkey=CDS;gene=foxA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=C9E97_RS08385;product=ferrioxamine B receptor FoxA;protein_id=WP_106777674.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	132264	133268	.	-	.	ID=gene-C9E97_RS08390;Name=foxR;gbkey=Gene;gene=foxR;gene_biotype=protein_coding;locus_tag=C9E97_RS08390;old_locus_tag=C9E97_08580
NZ_PYKA01000058.1	Protein Homology	CDS	132264	133268	.	-	0	ID=cds-WP_000074605.1;Parent=gene-C9E97_RS08390;Dbxref=GenBank:WP_000074605.1;Name=WP_000074605.1;gbkey=CDS;gene=foxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459358.1;locus_tag=C9E97_RS08390;product=ferrioxamine uptake transcriptional regulator FoxR;protein_id=WP_000074605.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	133364	133555	.	-	.	ID=gene-C9E97_RS23710;Name=C9E97_RS23710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23710
NZ_PYKA01000058.1	Protein Homology	CDS	133364	133555	.	-	0	ID=cds-WP_229023495.1;Parent=gene-C9E97_RS23710;Dbxref=GenBank:WP_229023495.1;Name=WP_229023495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459357.3;locus_tag=C9E97_RS23710;product=hypothetical protein;protein_id=WP_229023495.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	133474	133659	.	-	.	ID=gene-C9E97_RS23975;Name=C9E97_RS23975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23975;old_locus_tag=C9E97_08585
NZ_PYKA01000058.1	Protein Homology	CDS	133474	133659	.	-	0	ID=cds-WP_305954967.1;Parent=gene-C9E97_RS23975;Dbxref=GenBank:WP_305954967.1;Name=WP_305954967.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022085.6;locus_tag=C9E97_RS23975;product=DUF2474 domain-containing protein;protein_id=WP_305954967.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	133605	134615	.	-	.	ID=gene-C9E97_RS08400;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=C9E97_RS08400;old_locus_tag=C9E97_08590
NZ_PYKA01000058.1	Protein Homology	CDS	133605	134615	.	-	0	ID=cds-WP_000151047.1;Parent=gene-C9E97_RS08400;Dbxref=GenBank:WP_000151047.1;Name=WP_000151047.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459356.1;locus_tag=C9E97_RS08400;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000151047.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	134612	136015	.	-	.	ID=gene-C9E97_RS08405;Name=C9E97_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08405;old_locus_tag=C9E97_08595
NZ_PYKA01000058.1	Protein Homology	CDS	134612	136015	.	-	0	ID=cds-WP_000393711.1;Parent=gene-C9E97_RS08405;Dbxref=GenBank:WP_000393711.1;Name=WP_000393711.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459355.1;locus_tag=C9E97_RS08405;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000393711.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	136132	136233	.	-	.	ID=gene-C9E97_RS08410;Name=ssaA;gbkey=Gene;gene=ssaA;gene_biotype=protein_coding;locus_tag=C9E97_RS08410;old_locus_tag=C9E97_08600
NZ_PYKA01000058.1	Protein Homology	CDS	136132	136233	.	-	0	ID=cds-WP_000934834.1;Parent=gene-C9E97_RS08410;Dbxref=GenBank:WP_000934834.1;Name=WP_000934834.1;gbkey=CDS;gene=ssaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459354.1;locus_tag=C9E97_RS08410;product=small effector SsaA;protein_id=WP_000934834.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	136510	139482	.	-	.	ID=gene-C9E97_RS08415;Name=C9E97_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08415;old_locus_tag=C9E97_08605
NZ_PYKA01000058.1	Protein Homology	CDS	136510	139482	.	-	0	ID=cds-WP_077907133.1;Parent=gene-C9E97_RS08415;Dbxref=GenBank:WP_077907133.1;Name=WP_077907133.1;Ontology_term=GO:0003677,GO:0016788;gbkey=CDS;go_function=DNA binding|0003677||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=C9E97_RS08415;product=type III restriction-modification system endonuclease;protein_id=WP_077907133.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	139492	141450	.	-	.	ID=gene-C9E97_RS08420;Name=C9E97_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08420;old_locus_tag=C9E97_08610
NZ_PYKA01000058.1	Protein Homology	CDS	139492	141450	.	-	0	ID=cds-WP_000910349.1;Parent=gene-C9E97_RS08420;Dbxref=GenBank:WP_000910349.1;Name=WP_000910349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459352.1;locus_tag=C9E97_RS08420;product=site-specific DNA-methyltransferase;protein_id=WP_000910349.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	141639	142892	.	-	.	ID=gene-C9E97_RS08425;Name=C9E97_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08425;old_locus_tag=C9E97_08615
NZ_PYKA01000058.1	Protein Homology	CDS	141639	142892	.	-	0	ID=cds-WP_000288502.1;Parent=gene-C9E97_RS08425;Dbxref=GenBank:WP_000288502.1;Name=WP_000288502.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459351.1;locus_tag=C9E97_RS08425;product=MFS transporter;protein_id=WP_000288502.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	143184	143378	.	-	.	ID=gene-C9E97_RS08430;Name=golB;gbkey=Gene;gene=golB;gene_biotype=protein_coding;locus_tag=C9E97_RS08430;old_locus_tag=C9E97_08620
NZ_PYKA01000058.1	Protein Homology	CDS	143184	143378	.	-	0	ID=cds-WP_001159470.1;Parent=gene-C9E97_RS08430;Dbxref=GenBank:WP_001159470.1;Name=WP_001159470.1;gbkey=CDS;gene=golB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459350.1;locus_tag=C9E97_RS08430;product=gold resistance metallochaperone GolB;protein_id=WP_001159470.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	143456	143920	.	-	.	ID=gene-C9E97_RS08435;Name=golS;gbkey=Gene;gene=golS;gene_biotype=protein_coding;locus_tag=C9E97_RS08435;old_locus_tag=C9E97_08625
NZ_PYKA01000058.1	Protein Homology	CDS	143456	143920	.	-	0	ID=cds-WP_001020583.1;Parent=gene-C9E97_RS08435;Dbxref=GenBank:WP_001020583.1;Name=WP_001020583.1;gbkey=CDS;gene=golS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459349.1;locus_tag=C9E97_RS08435;product=Au(I) sensor transcriptional regulator GolS;protein_id=WP_001020583.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	143932	146220	.	-	.	ID=gene-C9E97_RS08440;Name=golT;gbkey=Gene;gene=golT;gene_biotype=protein_coding;locus_tag=C9E97_RS08440;old_locus_tag=C9E97_08630
NZ_PYKA01000058.1	Protein Homology	CDS	143932	146220	.	-	0	ID=cds-WP_080232284.1;Parent=gene-C9E97_RS08440;Dbxref=GenBank:WP_080232284.1;Name=WP_080232284.1;gbkey=CDS;gene=golT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083318.1;locus_tag=C9E97_RS08440;product=gold/copper-translocating P-type ATPase GolT;protein_id=WP_080232284.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	146497	147723	.	+	.	ID=gene-C9E97_RS08445;Name=mdsA;gbkey=Gene;gene=mdsA;gene_biotype=protein_coding;locus_tag=C9E97_RS08445;old_locus_tag=C9E97_08635
NZ_PYKA01000058.1	Protein Homology	CDS	146497	147723	.	+	0	ID=cds-WP_135369139.1;Parent=gene-C9E97_RS08445;Dbxref=GenBank:WP_135369139.1;Name=WP_135369139.1;gbkey=CDS;gene=mdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459347.3;locus_tag=C9E97_RS08445;product=multidrug efflux RND transporter periplasmic adaptor subunit MdsA;protein_id=WP_135369139.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	147720	150887	.	+	.	ID=gene-C9E97_RS08450;Name=mdsB;gbkey=Gene;gene=mdsB;gene_biotype=protein_coding;locus_tag=C9E97_RS08450;old_locus_tag=C9E97_08640
NZ_PYKA01000058.1	Protein Homology	CDS	147720	150887	.	+	0	ID=cds-WP_135369138.1;Parent=gene-C9E97_RS08450;Dbxref=GenBank:WP_135369138.1;Name=WP_135369138.1;gbkey=CDS;gene=mdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=C9E97_RS08450;product=multidrug efflux RND transporter permease subunit MdsB;protein_id=WP_135369138.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	150904	152361	.	+	.	ID=gene-C9E97_RS08455;Name=mdsC;gbkey=Gene;gene=mdsC;gene_biotype=protein_coding;locus_tag=C9E97_RS08455;old_locus_tag=C9E97_08645
NZ_PYKA01000058.1	Protein Homology	CDS	150904	152361	.	+	0	ID=cds-WP_001672617.1;Parent=gene-C9E97_RS08455;Dbxref=GenBank:WP_001672617.1;Name=WP_001672617.1;gbkey=CDS;gene=mdsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521068.1;locus_tag=C9E97_RS08455;product=multidrug efflux transporter outer membrane subunit MdsC;protein_id=WP_001672617.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	152431	152790	.	-	.	ID=gene-C9E97_RS08460;Name=C9E97_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08460;old_locus_tag=C9E97_08650
NZ_PYKA01000058.1	Protein Homology	CDS	152431	152790	.	-	0	ID=cds-WP_000722978.1;Parent=gene-C9E97_RS08460;Dbxref=GenBank:WP_000722978.1;Name=WP_000722978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459344.1;locus_tag=C9E97_RS08460;product=DUF4156 domain-containing protein;protein_id=WP_000722978.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	152848	153072	.	-	.	ID=gene-C9E97_RS08465;Name=C9E97_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08465;old_locus_tag=C9E97_08655
NZ_PYKA01000058.1	Protein Homology	CDS	152848	153072	.	-	0	ID=cds-WP_000737125.1;Parent=gene-C9E97_RS08465;Dbxref=GenBank:WP_000737125.1;Name=WP_000737125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459343.1;locus_tag=C9E97_RS08465;product=membrane protein;protein_id=WP_000737125.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	153083	153724	.	-	.	ID=gene-C9E97_RS08470;Name=C9E97_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08470;old_locus_tag=C9E97_08660
NZ_PYKA01000058.1	Protein Homology	CDS	153083	153724	.	-	0	ID=cds-WP_000610827.1;Parent=gene-C9E97_RS08470;Dbxref=GenBank:WP_000610827.1;Name=WP_000610827.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459342.1;locus_tag=C9E97_RS08470;product=helix-turn-helix transcriptional regulator;protein_id=WP_000610827.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	153868	154392	.	-	.	ID=gene-C9E97_RS08475;Name=C9E97_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08475;old_locus_tag=C9E97_08665
NZ_PYKA01000058.1	Protein Homology	CDS	153868	154392	.	-	0	ID=cds-WP_000830237.1;Parent=gene-C9E97_RS08475;Dbxref=GenBank:WP_000830237.1;Name=WP_000830237.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459341.1;locus_tag=C9E97_RS08475;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_000830237.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	154794	155282	.	-	.	ID=gene-C9E97_RS08480;Name=C9E97_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08480;old_locus_tag=C9E97_08670
NZ_PYKA01000058.1	Protein Homology	CDS	154794	155282	.	-	0	ID=cds-WP_000545426.1;Parent=gene-C9E97_RS08480;Dbxref=GenBank:WP_000545426.1;Name=WP_000545426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459340.1;locus_tag=C9E97_RS08480;product=hypothetical protein;protein_id=WP_000545426.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	155255	155998	.	-	.	ID=gene-C9E97_RS08485;Name=C9E97_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08485;old_locus_tag=C9E97_08675
NZ_PYKA01000058.1	Protein Homology	CDS	155255	155998	.	-	0	ID=cds-WP_058107948.1;Parent=gene-C9E97_RS08485;Dbxref=GenBank:WP_058107948.1;Name=WP_058107948.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459339.1;locus_tag=C9E97_RS08485;product=transcriptional regulator;protein_id=WP_058107948.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	156098	157672	.	-	.	ID=gene-C9E97_RS08490;Name=C9E97_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08490;old_locus_tag=C9E97_08680
NZ_PYKA01000058.1	Protein Homology	CDS	156098	157672	.	-	0	ID=cds-WP_135369132.1;Parent=gene-C9E97_RS08490;Dbxref=GenBank:WP_135369132.1;Name=WP_135369132.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459338.1;locus_tag=C9E97_RS08490;product=EAL domain-containing protein;protein_id=WP_135369132.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	pseudogene	158174	158474	.	-	.	ID=gene-C9E97_RS08495;Name=C9E97_RS08495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS08495;old_locus_tag=C9E97_08685;pseudo=true
NZ_PYKA01000058.1	Protein Homology	CDS	158174	158474	.	-	0	ID=cds-C9E97_RS08495;Parent=gene-C9E97_RS08495;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459337.1;locus_tag=C9E97_RS08495;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	158447	159181	.	-	.	ID=gene-C9E97_RS08500;Name=C9E97_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08500;old_locus_tag=C9E97_08690
NZ_PYKA01000058.1	Protein Homology	CDS	158447	159181	.	-	0	ID=cds-WP_001005866.1;Parent=gene-C9E97_RS08500;Dbxref=GenBank:WP_001005866.1;Name=WP_001005866.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005860.1;locus_tag=C9E97_RS08500;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001005866.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	159845	160381	.	+	.	ID=gene-C9E97_RS08505;Name=C9E97_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08505;old_locus_tag=C9E97_08700
NZ_PYKA01000058.1	Protein Homology	CDS	159845	160381	.	+	0	ID=cds-WP_000062035.1;Parent=gene-C9E97_RS08505;Dbxref=GenBank:WP_000062035.1;Name=WP_000062035.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459335.1;locus_tag=C9E97_RS08505;product=fimbrial protein;protein_id=WP_000062035.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	160443	161204	.	+	.	ID=gene-C9E97_RS08510;Name=stbB;gbkey=Gene;gene=stbB;gene_biotype=protein_coding;locus_tag=C9E97_RS08510;old_locus_tag=C9E97_08705
NZ_PYKA01000058.1	Protein Homology	CDS	160443	161204	.	+	0	ID=cds-WP_079897707.1;Parent=gene-C9E97_RS08510;Dbxref=GenBank:WP_079897707.1;Name=WP_079897707.1;gbkey=CDS;gene=stbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459334.1;locus_tag=C9E97_RS08510;product=fimbrial biogenesis chaperone StbB;protein_id=WP_079897707.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	161188	163749	.	+	.	ID=gene-C9E97_RS08515;Name=C9E97_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08515;old_locus_tag=C9E97_08710
NZ_PYKA01000058.1	Protein Homology	CDS	161188	163749	.	+	0	ID=cds-WP_135369131.1;Parent=gene-C9E97_RS08515;Dbxref=GenBank:WP_135369131.1;Name=WP_135369131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459333.1;locus_tag=C9E97_RS08515;product=fimbrial outer membrane usher protein;protein_id=WP_135369131.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	163754	165079	.	+	.	ID=gene-C9E97_RS08520;Name=stbD;gbkey=Gene;gene=stbD;gene_biotype=protein_coding;locus_tag=C9E97_RS08520;old_locus_tag=C9E97_08715
NZ_PYKA01000058.1	Protein Homology	CDS	163754	165079	.	+	0	ID=cds-WP_000899100.1;Parent=gene-C9E97_RS08520;Dbxref=GenBank:WP_000899100.1;Name=WP_000899100.1;gbkey=CDS;gene=stbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=C9E97_RS08520;product=fimbrial usher protein StbD;protein_id=WP_000899100.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	165045	165803	.	+	.	ID=gene-C9E97_RS08525;Name=stbE;gbkey=Gene;gene=stbE;gene_biotype=protein_coding;locus_tag=C9E97_RS08525;old_locus_tag=C9E97_08720
NZ_PYKA01000058.1	Protein Homology	CDS	165045	165803	.	+	0	ID=cds-WP_080230028.1;Parent=gene-C9E97_RS08525;Dbxref=GenBank:WP_080230028.1;Name=WP_080230028.1;gbkey=CDS;gene=stbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459331.1;locus_tag=C9E97_RS08525;product=fimbrial biogenesis chaperone StbE;protein_id=WP_080230028.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	165850	166248	.	-	.	ID=gene-C9E97_RS08530;Name=C9E97_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08530;old_locus_tag=C9E97_08725
NZ_PYKA01000058.1	Protein Homology	CDS	165850	166248	.	-	0	ID=cds-WP_000766845.1;Parent=gene-C9E97_RS08530;Dbxref=GenBank:WP_000766845.1;Name=WP_000766845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459330.1;locus_tag=C9E97_RS08530;product=hypothetical protein;protein_id=WP_000766845.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	166939	167211	.	+	.	ID=gene-C9E97_RS08535;Name=C9E97_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08535;old_locus_tag=C9E97_08730
NZ_PYKA01000058.1	Protein Homology	CDS	166939	167211	.	+	0	ID=cds-WP_001675688.1;Parent=gene-C9E97_RS08535;Dbxref=GenBank:WP_001675688.1;Name=WP_001675688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459329.1;locus_tag=C9E97_RS08535;product=hypothetical protein;protein_id=WP_001675688.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	167156	168121	.	-	.	ID=gene-C9E97_RS08540;Name=C9E97_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08540;old_locus_tag=C9E97_08735
NZ_PYKA01000058.1	Protein Homology	CDS	167156	168121	.	-	0	ID=cds-WP_000859020.1;Parent=gene-C9E97_RS08540;Dbxref=GenBank:WP_000859020.1;Name=WP_000859020.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459328.1;locus_tag=C9E97_RS08540;product=LysR family transcriptional regulator;protein_id=WP_000859020.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	168155	169069	.	-	.	ID=gene-C9E97_RS08545;Name=C9E97_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08545;old_locus_tag=C9E97_08740
NZ_PYKA01000058.1	Protein Homology	CDS	168155	169069	.	-	0	ID=cds-WP_000105592.1;Parent=gene-C9E97_RS08545;Dbxref=GenBank:WP_000105592.1;Name=WP_000105592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459327.1;locus_tag=C9E97_RS08545;product=alpha/beta fold hydrolase;protein_id=WP_000105592.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	pseudogene	169069	169947	.	-	.	ID=gene-C9E97_RS08550;Name=C9E97_RS08550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS08550;old_locus_tag=C9E97_08745;pseudo=true
NZ_PYKA01000058.1	Protein Homology	CDS	169069	169947	.	-	0	ID=cds-C9E97_RS08550;Parent=gene-C9E97_RS08550;Note=internal stop;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459326.1;locus_tag=C9E97_RS08550;product=fumarylacetoacetate hydrolase family protein;pseudo=true;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	169962	170588	.	-	.	ID=gene-C9E97_RS08555;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=C9E97_RS08555;old_locus_tag=C9E97_08750
NZ_PYKA01000058.1	Protein Homology	CDS	169962	170588	.	-	0	ID=cds-WP_135369198.1;Parent=gene-C9E97_RS08555;Dbxref=GenBank:WP_135369198.1;Name=WP_135369198.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459325.1;locus_tag=C9E97_RS08555;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_135369198.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	170590	172011	.	-	.	ID=gene-C9E97_RS08560;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=C9E97_RS08560;old_locus_tag=C9E97_08755
NZ_PYKA01000058.1	Protein Homology	CDS	170590	172011	.	-	0	ID=cds-WP_001274861.1;Parent=gene-C9E97_RS08560;Dbxref=GenBank:WP_001274861.1;Name=WP_001274861.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459324.1;locus_tag=C9E97_RS08560;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001274861.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	172143	173381	.	-	.	ID=gene-C9E97_RS08565;Name=C9E97_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08565;old_locus_tag=C9E97_08760
NZ_PYKA01000058.1	Protein Homology	CDS	172143	173381	.	-	0	ID=cds-WP_135369200.1;Parent=gene-C9E97_RS08565;Dbxref=GenBank:WP_135369200.1;Name=WP_135369200.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459323.3;locus_tag=C9E97_RS08565;product=MFS transporter;protein_id=WP_135369200.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	173722	174045	.	-	.	ID=gene-C9E97_RS08570;Name=C9E97_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08570;old_locus_tag=C9E97_08765
NZ_PYKA01000058.1	Protein Homology	CDS	173722	174045	.	-	0	ID=cds-WP_001573898.1;Parent=gene-C9E97_RS08570;Dbxref=GenBank:WP_001573898.1;Name=WP_001573898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459322.1;locus_tag=C9E97_RS08570;product=DUF1889 family protein;protein_id=WP_001573898.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	pseudogene	174155	174869	.	-	.	ID=gene-C9E97_RS08575;Name=C9E97_RS08575;end_range=174869,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS08575;old_locus_tag=C9E97_08770;partial=true;pseudo=true
NZ_PYKA01000058.1	Protein Homology	CDS	174155	174869	.	-	0	ID=cds-C9E97_RS08575;Parent=gene-C9E97_RS08575;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=174869,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003828496.1;locus_tag=C9E97_RS08575;partial=true;product=diol dehydratase reactivase ATPase-like domain-containing protein;pseudo=true;transl_table=11
NZ_PYKA01000058.1	RefSeq	pseudogene	174871	175650	.	+	.	ID=gene-C9E97_RS08580;Name=C9E97_RS08580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS08580;old_locus_tag=C9E97_08775;partial=true;pseudo=true;start_range=.,174871
NZ_PYKA01000058.1	Protein Homology	CDS	174871	175650	.	+	0	ID=cds-C9E97_RS08580;Parent=gene-C9E97_RS08580;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=C9E97_RS08580;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,174871;transl_table=11
NZ_PYKA01000058.1	RefSeq	pseudogene	175668	175922	.	-	.	ID=gene-C9E97_RS08585;Name=C9E97_RS08585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS08585;old_locus_tag=C9E97_08780;partial=true;pseudo=true;start_range=.,175668
NZ_PYKA01000058.1	Protein Homology	CDS	175668	175922	.	-	0	ID=cds-C9E97_RS08585;Parent=gene-C9E97_RS08585;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225313.1;locus_tag=C9E97_RS08585;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;start_range=.,175668;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	176086	176161	.	-	.	ID=gene-C9E97_RS08590;Name=C9E97_RS08590;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS08590;old_locus_tag=C9E97_08785
NZ_PYKA01000058.1	tRNAscan-SE	tRNA	176086	176161	.	-	.	ID=rna-C9E97_RS08590;Parent=gene-C9E97_RS08590;anticodon=(pos:complement(176126..176128));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS08590;product=tRNA-Thr
NZ_PYKA01000058.1	tRNAscan-SE	exon	176086	176161	.	-	.	ID=exon-C9E97_RS08590-1;Parent=rna-C9E97_RS08590;anticodon=(pos:complement(176126..176128));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS08590;product=tRNA-Thr
NZ_PYKA01000058.1	RefSeq	gene	176277	177527	.	-	.	ID=gene-C9E97_RS08595;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=C9E97_RS08595;old_locus_tag=C9E97_08790
NZ_PYKA01000058.1	Protein Homology	CDS	176277	177527	.	-	0	ID=cds-WP_135369199.1;Parent=gene-C9E97_RS08595;Dbxref=GenBank:WP_135369199.1;Name=WP_135369199.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459319.1;locus_tag=C9E97_RS08595;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_135369199.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	177539	178642	.	-	.	ID=gene-C9E97_RS08600;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=C9E97_RS08600;old_locus_tag=C9E97_08795
NZ_PYKA01000058.1	Protein Homology	CDS	177539	178642	.	-	0	ID=cds-WP_001285275.1;Parent=gene-C9E97_RS08600;Dbxref=GenBank:WP_001285275.1;Name=WP_001285275.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459318.1;locus_tag=C9E97_RS08600;product=glutamate 5-kinase;protein_id=WP_001285275.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	178925	179977	.	+	.	ID=gene-C9E97_RS08605;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=C9E97_RS08605;old_locus_tag=C9E97_08800
NZ_PYKA01000058.1	Protein Homology	CDS	178925	179977	.	+	0	ID=cds-WP_001043662.1;Parent=gene-C9E97_RS08605;Dbxref=GenBank:WP_001043662.1;Name=WP_001043662.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459317.1;locus_tag=C9E97_RS08605;product=phosphoporin PhoE;protein_id=WP_001043662.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	180028	180429	.	-	.	ID=gene-C9E97_RS08610;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=C9E97_RS08610;old_locus_tag=C9E97_08805
NZ_PYKA01000058.1	Protein Homology	CDS	180028	180429	.	-	0	ID=cds-WP_000174696.1;Parent=gene-C9E97_RS08610;Dbxref=GenBank:WP_000174696.1;Name=WP_000174696.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459316.1;locus_tag=C9E97_RS08610;product=sigma factor-binding protein Crl;protein_id=WP_000174696.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	180487	181731	.	-	.	ID=gene-C9E97_RS08615;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=C9E97_RS08615;old_locus_tag=C9E97_08810
NZ_PYKA01000058.1	Protein Homology	CDS	180487	181731	.	-	0	ID=cds-WP_000189586.1;Parent=gene-C9E97_RS08615;Dbxref=GenBank:WP_000189586.1;Name=WP_000189586.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459315.1;locus_tag=C9E97_RS08615;product=esterase FrsA;protein_id=WP_000189586.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	181820	182278	.	-	.	ID=gene-C9E97_RS08620;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=C9E97_RS08620;old_locus_tag=C9E97_08815
NZ_PYKA01000058.1	Protein Homology	CDS	181820	182278	.	-	0	ID=cds-WP_001292018.1;Parent=gene-C9E97_RS08620;Dbxref=GenBank:WP_001292018.1;Name=WP_001292018.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459314.1;locus_tag=C9E97_RS08620;product=xanthine phosphoribosyltransferase;protein_id=WP_001292018.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	182527	183984	.	+	.	ID=gene-C9E97_RS08625;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=C9E97_RS08625;old_locus_tag=C9E97_08820
NZ_PYKA01000058.1	Protein Homology	CDS	182527	183984	.	+	0	ID=cds-WP_001292977.1;Parent=gene-C9E97_RS08625;Dbxref=GenBank:WP_001292977.1;Name=WP_001292977.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=C9E97_RS08625;product=cytosol nonspecific dipeptidase;protein_id=WP_001292977.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	184140	184754	.	-	.	ID=gene-C9E97_RS08630;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=protein_coding;locus_tag=C9E97_RS08630;old_locus_tag=C9E97_08825
NZ_PYKA01000058.1	Protein Homology	CDS	184140	184754	.	-	0	ID=cds-WP_000602086.1;Parent=gene-C9E97_RS08630;Dbxref=GenBank:WP_000602086.1;Name=WP_000602086.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459312.1;locus_tag=C9E97_RS08630;product=peptide chain release factor H;protein_id=WP_000602086.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	184751	185890	.	-	.	ID=gene-C9E97_RS08635;Name=C9E97_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08635;old_locus_tag=C9E97_08830
NZ_PYKA01000058.1	Protein Homology	CDS	184751	185890	.	-	0	ID=cds-WP_000528901.1;Parent=gene-C9E97_RS08635;Dbxref=GenBank:WP_000528901.1;Name=WP_000528901.1;Ontology_term=GO:0006415;gbkey=CDS;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006895405.1;locus_tag=C9E97_RS08635;product=RNA ligase RtcB family protein;protein_id=WP_000528901.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	186109	187164	.	-	.	ID=gene-C9E97_RS08640;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=C9E97_RS08640;old_locus_tag=C9E97_08835
NZ_PYKA01000058.1	Protein Homology	CDS	186109	187164	.	-	0	ID=cds-WP_001226204.1;Parent=gene-C9E97_RS08640;Dbxref=GenBank:WP_001226204.1;Name=WP_001226204.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459311.1;locus_tag=C9E97_RS08640;product=DNA polymerase IV;protein_id=WP_001226204.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	187414	188154	.	+	.	ID=gene-C9E97_RS08645;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=C9E97_RS08645;old_locus_tag=C9E97_08840
NZ_PYKA01000058.1	Protein Homology	CDS	187414	188154	.	+	0	ID=cds-WP_001225658.1;Parent=gene-C9E97_RS08645;Dbxref=GenBank:WP_001225658.1;Name=WP_001225658.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459310.1;locus_tag=C9E97_RS08645;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_001225658.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	188125	188892	.	-	.	ID=gene-C9E97_RS08650;Name=C9E97_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08650;old_locus_tag=C9E97_08845
NZ_PYKA01000058.1	Protein Homology	CDS	188125	188892	.	-	0	ID=cds-WP_000333387.1;Parent=gene-C9E97_RS08650;Dbxref=GenBank:WP_000333387.1;Name=WP_000333387.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459309.1;locus_tag=C9E97_RS08650;product=class II glutamine amidotransferase;protein_id=WP_000333387.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	189105	189683	.	-	.	ID=gene-C9E97_RS08655;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=C9E97_RS08655;old_locus_tag=C9E97_08850
NZ_PYKA01000058.1	Protein Homology	CDS	189105	189683	.	-	0	ID=cds-WP_000284051.1;Parent=gene-C9E97_RS08655;Dbxref=GenBank:WP_000284051.1;Name=WP_000284051.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459308.1;locus_tag=C9E97_RS08655;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_000284051.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	189923	192367	.	+	.	ID=gene-C9E97_RS08660;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=C9E97_RS08660;old_locus_tag=C9E97_08855
NZ_PYKA01000058.1	Protein Homology	CDS	189923	192367	.	+	0	ID=cds-WP_000973041.1;Parent=gene-C9E97_RS08660;Dbxref=GenBank:WP_000973041.1;Name=WP_000973041.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=C9E97_RS08660;product=acyl-CoA dehydrogenase FadE;protein_id=WP_000973041.1;transl_table=11
NZ_PYKA01000058.1	RefSeq	gene	192476	193243	.	+	.	ID=gene-C9E97_RS08665;Name=C9E97_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS08665;old_locus_tag=C9E97_08860
NZ_PYKA01000058.1	Protein Homology	CDS	192476	193243	.	+	0	ID=cds-WP_000015789.1;Parent=gene-C9E97_RS08665;Dbxref=GenBank:WP_000015789.1;Name=WP_000015789.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459306.1;locus_tag=C9E97_RS08665;product=amidohydrolase;protein_id=WP_000015789.1;transl_table=11
##sequence-region NZ_PYKA01000036.1 1 55881
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000036.1	RefSeq	region	1	55881	.	+	.	ID=NZ_PYKA01000036.1:1..55881;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000036.1	RefSeq	gene	290	856	.	+	.	ID=gene-C9E97_RS04405;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=C9E97_RS04405;old_locus_tag=C9E97_04535
NZ_PYKA01000036.1	Protein Homology	CDS	290	856	.	+	0	ID=cds-WP_000271296.1;Parent=gene-C9E97_RS04405;Dbxref=GenBank:WP_000271296.1;Name=WP_000271296.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461746.1;locus_tag=C9E97_RS04405;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_000271296.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	853	1278	.	+	.	ID=gene-C9E97_RS04410;Name=C9E97_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04410;old_locus_tag=C9E97_04540
NZ_PYKA01000036.1	Protein Homology	CDS	853	1278	.	+	0	ID=cds-WP_001279499.1;Parent=gene-C9E97_RS04410;Dbxref=GenBank:WP_001279499.1;Name=WP_001279499.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461745.1;locus_tag=C9E97_RS04410;product=YqaA family protein;protein_id=WP_001279499.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	1355	2911	.	+	.	ID=gene-C9E97_RS04415;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=C9E97_RS04415;old_locus_tag=C9E97_04545
NZ_PYKA01000036.1	Protein Homology	CDS	1355	2911	.	+	0	ID=cds-WP_000611821.1;Parent=gene-C9E97_RS04415;Dbxref=GenBank:WP_000611821.1;Name=WP_000611821.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461744.1;locus_tag=C9E97_RS04415;product=glutamate--cysteine ligase;protein_id=WP_000611821.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	3061	3576	.	+	.	ID=gene-C9E97_RS04420;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=C9E97_RS04420;old_locus_tag=C9E97_04550
NZ_PYKA01000036.1	Protein Homology	CDS	3061	3576	.	+	0	ID=cds-WP_001130194.1;Parent=gene-C9E97_RS04420;Dbxref=GenBank:WP_001130194.1;Name=WP_001130194.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=C9E97_RS04420;product=S-ribosylhomocysteine lyase;protein_id=WP_001130194.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	3922	5292	.	+	.	ID=gene-C9E97_RS04425;Name=C9E97_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04425;old_locus_tag=C9E97_04555
NZ_PYKA01000036.1	Protein Homology	CDS	3922	5292	.	+	0	ID=cds-WP_000645137.1;Parent=gene-C9E97_RS04425;Dbxref=GenBank:WP_000645137.1;Name=WP_000645137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461742.1;locus_tag=C9E97_RS04425;product=carbohydrate porin;protein_id=WP_000645137.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	5341	6879	.	-	.	ID=gene-C9E97_RS04430;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=C9E97_RS04430;old_locus_tag=C9E97_04560
NZ_PYKA01000036.1	Protein Homology	CDS	5341	6879	.	-	0	ID=cds-WP_001187297.1;Parent=gene-C9E97_RS04430;Dbxref=GenBank:WP_001187297.1;Name=WP_001187297.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461741.1;locus_tag=C9E97_RS04430;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_001187297.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	6896	8068	.	-	.	ID=gene-C9E97_RS04435;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=C9E97_RS04435;old_locus_tag=C9E97_04565
NZ_PYKA01000036.1	Protein Homology	CDS	6896	8068	.	-	0	ID=cds-WP_001275605.1;Parent=gene-C9E97_RS04435;Dbxref=GenBank:WP_001275605.1;Name=WP_001275605.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461740.1;locus_tag=C9E97_RS04435;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_001275605.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	8195	8725	.	-	.	ID=gene-C9E97_RS04440;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=C9E97_RS04440;old_locus_tag=C9E97_04570
NZ_PYKA01000036.1	Protein Homology	CDS	8195	8725	.	-	0	ID=cds-WP_000378431.1;Parent=gene-C9E97_RS04440;Dbxref=GenBank:WP_000378431.1;Name=WP_000378431.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461739.1;locus_tag=C9E97_RS04440;product=transcriptional repressor MprA;protein_id=WP_000378431.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	9222	10406	.	-	.	ID=gene-C9E97_RS04445;Name=C9E97_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04445;old_locus_tag=C9E97_04575
NZ_PYKA01000036.1	Protein Homology	CDS	9222	10406	.	-	0	ID=cds-WP_135369228.1;Parent=gene-C9E97_RS04445;Dbxref=GenBank:WP_135369228.1;Name=WP_135369228.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461738.1;locus_tag=C9E97_RS04445;product=MFS transporter;protein_id=WP_135369228.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	10571	11566	.	-	.	ID=gene-C9E97_RS04450;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=C9E97_RS04450;old_locus_tag=C9E97_04580
NZ_PYKA01000036.1	Protein Homology	CDS	10571	11566	.	-	0	ID=cds-WP_001216613.1;Parent=gene-C9E97_RS04450;Dbxref=GenBank:WP_001216613.1;Name=WP_001216613.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461737.1;locus_tag=C9E97_RS04450;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_001216613.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	11636	12700	.	-	.	ID=gene-C9E97_RS04455;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=C9E97_RS04455;old_locus_tag=C9E97_04585
NZ_PYKA01000036.1	Protein Homology	CDS	11636	12700	.	-	0	ID=cds-WP_000775021.1;Parent=gene-C9E97_RS04455;Dbxref=GenBank:WP_000775021.1;Name=WP_000775021.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461736.1;locus_tag=C9E97_RS04455;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_000775021.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	12693	13895	.	-	.	ID=gene-C9E97_RS04460;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=C9E97_RS04460;old_locus_tag=C9E97_04590
NZ_PYKA01000036.1	Protein Homology	CDS	12693	13895	.	-	0	ID=cds-WP_000985529.1;Parent=gene-C9E97_RS04460;Dbxref=GenBank:WP_000985529.1;Name=WP_000985529.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=C9E97_RS04460;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_000985529.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	14250	15209	.	-	.	ID=gene-C9E97_RS04470;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=C9E97_RS04470;old_locus_tag=C9E97_04600
NZ_PYKA01000036.1	Protein Homology	CDS	14250	15209	.	-	0	ID=cds-WP_000777901.1;Parent=gene-C9E97_RS04470;Dbxref=GenBank:WP_000777901.1;Name=WP_000777901.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461734.1;locus_tag=C9E97_RS04470;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000777901.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	15220	17364	.	-	.	ID=gene-C9E97_RS04475;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=C9E97_RS04475;old_locus_tag=C9E97_04605
NZ_PYKA01000036.1	Protein Homology	CDS	15220	17364	.	-	0	ID=cds-WP_000246626.1;Parent=gene-C9E97_RS04475;Dbxref=GenBank:WP_000246626.1;Name=WP_000246626.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461733.1;locus_tag=C9E97_RS04475;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_000246626.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	17337	17747	.	-	.	ID=gene-C9E97_RS04480;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=C9E97_RS04480;old_locus_tag=C9E97_04610
NZ_PYKA01000036.1	Protein Homology	CDS	17337	17747	.	-	0	ID=cds-WP_001275401.1;Parent=gene-C9E97_RS04480;Dbxref=GenBank:WP_001275401.1;Name=WP_001275401.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461732.1;locus_tag=C9E97_RS04480;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_001275401.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	17744	17989	.	-	.	ID=gene-C9E97_RS04485;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=C9E97_RS04485;old_locus_tag=C9E97_04615
NZ_PYKA01000036.1	Protein Homology	CDS	17744	17989	.	-	0	ID=cds-WP_000028870.1;Parent=gene-C9E97_RS04485;Dbxref=GenBank:WP_000028870.1;Name=WP_000028870.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461731.1;locus_tag=C9E97_RS04485;product=glutaredoxin-like protein NrdH;protein_id=WP_000028870.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	18261	18692	.	-	.	ID=gene-C9E97_RS04495;Name=C9E97_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04495;old_locus_tag=C9E97_04625
NZ_PYKA01000036.1	Protein Homology	CDS	18261	18692	.	-	0	ID=cds-WP_000209815.1;Parent=gene-C9E97_RS04495;Dbxref=GenBank:WP_000209815.1;Name=WP_000209815.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461730.1;locus_tag=C9E97_RS04495;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000209815.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	18781	20115	.	+	.	ID=gene-C9E97_RS04500;Name=C9E97_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04500;old_locus_tag=C9E97_04630
NZ_PYKA01000036.1	Protein Homology	CDS	18781	20115	.	+	0	ID=cds-WP_135369230.1;Parent=gene-C9E97_RS04500;Dbxref=GenBank:WP_135369230.1;Name=WP_135369230.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=C9E97_RS04500;product=PLP-dependent aminotransferase family protein;protein_id=WP_135369230.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	20199	20525	.	-	.	ID=gene-C9E97_RS04505;Name=C9E97_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04505;old_locus_tag=C9E97_04635
NZ_PYKA01000036.1	Protein Homology	CDS	20199	20525	.	-	0	ID=cds-WP_001519557.1;Parent=gene-C9E97_RS04505;Dbxref=GenBank:WP_001519557.1;Name=WP_001519557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528627.1;locus_tag=C9E97_RS04505;product=DUF883 domain-containing protein;protein_id=WP_001519557.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	20687	21037	.	+	.	ID=gene-C9E97_RS04510;Name=C9E97_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04510;old_locus_tag=C9E97_04640
NZ_PYKA01000036.1	Protein Homology	CDS	20687	21037	.	+	0	ID=cds-WP_000281305.1;Parent=gene-C9E97_RS04510;Dbxref=GenBank:WP_000281305.1;Name=WP_000281305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461727.1;locus_tag=C9E97_RS04510;product=DUF2002 family protein;protein_id=WP_000281305.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	21072	21521	.	-	.	ID=gene-C9E97_RS04515;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=C9E97_RS04515;old_locus_tag=C9E97_04645
NZ_PYKA01000036.1	Protein Homology	CDS	21072	21521	.	-	0	ID=cds-WP_000492669.1;Parent=gene-C9E97_RS04515;Dbxref=GenBank:WP_000492669.1;Name=WP_000492669.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461726.1;locus_tag=C9E97_RS04515;product=L-alanine exporter AlaE;protein_id=WP_000492669.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	22220	22621	.	+	.	ID=gene-C9E97_RS04525;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=C9E97_RS04525;old_locus_tag=C9E97_04655
NZ_PYKA01000036.1	Protein Homology	CDS	22220	22621	.	+	0	ID=cds-WP_001051100.1;Parent=gene-C9E97_RS04525;Dbxref=GenBank:WP_001051100.1;Name=WP_001051100.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461725.1;locus_tag=C9E97_RS04525;product=DNA-binding protein StpA;protein_id=WP_001051100.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	22711	22890	.	-	.	ID=gene-C9E97_RS04530;Name=C9E97_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04530;old_locus_tag=C9E97_04660
NZ_PYKA01000036.1	Protein Homology	CDS	22711	22890	.	-	0	ID=cds-WP_000494942.1;Parent=gene-C9E97_RS04530;Dbxref=GenBank:WP_000494942.1;Name=WP_000494942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494935.1;locus_tag=C9E97_RS04530;product=hypothetical protein;protein_id=WP_000494942.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	22969	23496	.	-	.	ID=gene-C9E97_RS04535;Name=C9E97_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04535;old_locus_tag=C9E97_04665
NZ_PYKA01000036.1	Protein Homology	CDS	22969	23496	.	-	0	ID=cds-WP_000022011.1;Parent=gene-C9E97_RS04535;Dbxref=GenBank:WP_000022011.1;Name=WP_000022011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461724.1;locus_tag=C9E97_RS04535;product=rhodanese family protein;protein_id=WP_000022011.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	23506	23805	.	-	.	ID=gene-C9E97_RS04540;Name=C9E97_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04540;old_locus_tag=C9E97_04670
NZ_PYKA01000036.1	Protein Homology	CDS	23506	23805	.	-	0	ID=cds-WP_000137432.1;Parent=gene-C9E97_RS04540;Dbxref=GenBank:WP_000137432.1;Name=WP_000137432.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461723.1;locus_tag=C9E97_RS04540;product=ArsR/SmtB family transcription factor;protein_id=WP_000137432.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	23988	24146	.	+	.	ID=gene-C9E97_RS04545;Name=C9E97_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04545;old_locus_tag=C9E97_04675
NZ_PYKA01000036.1	Protein Homology	CDS	23988	24146	.	+	0	ID=cds-WP_000508175.1;Parent=gene-C9E97_RS04545;Dbxref=GenBank:WP_000508175.1;Name=WP_000508175.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461722.1;locus_tag=C9E97_RS04545;product=YqaE/Pmp3 family membrane protein;protein_id=WP_000508175.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	24246	24695	.	+	.	ID=gene-C9E97_RS04555;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=C9E97_RS04555;old_locus_tag=C9E97_04685
NZ_PYKA01000036.1	Protein Homology	CDS	24246	24695	.	+	0	ID=cds-WP_000522406.1;Parent=gene-C9E97_RS04555;Dbxref=GenBank:WP_000522406.1;Name=WP_000522406.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461721.1;locus_tag=C9E97_RS04555;product=peptidoglycan-binding protein LysM;protein_id=WP_000522406.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	24717	25394	.	-	.	ID=gene-C9E97_RS04560;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=C9E97_RS04560;old_locus_tag=C9E97_04690
NZ_PYKA01000036.1	Protein Homology	CDS	24717	25394	.	-	0	ID=cds-WP_000126152.1;Parent=gene-C9E97_RS04560;Dbxref=GenBank:WP_000126152.1;Name=WP_000126152.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461720.1;locus_tag=C9E97_RS04560;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_000126152.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	25436	26836	.	-	.	ID=gene-C9E97_RS04565;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=C9E97_RS04565;old_locus_tag=C9E97_04695
NZ_PYKA01000036.1	Protein Homology	CDS	25436	26836	.	-	0	ID=cds-WP_000531282.1;Parent=gene-C9E97_RS04565;Dbxref=GenBank:WP_000531282.1;Name=WP_000531282.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461719.1;locus_tag=C9E97_RS04565;product=GABA permease;protein_id=WP_000531282.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	26966	28249	.	-	.	ID=gene-C9E97_RS04570;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=C9E97_RS04570;old_locus_tag=C9E97_04700
NZ_PYKA01000036.1	Protein Homology	CDS	26966	28249	.	-	0	ID=cds-WP_001095561.1;Parent=gene-C9E97_RS04570;Dbxref=GenBank:WP_001095561.1;Name=WP_001095561.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461718.1;locus_tag=C9E97_RS04570;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_001095561.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	28264	29712	.	-	.	ID=gene-C9E97_RS04575;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=C9E97_RS04575;old_locus_tag=C9E97_04705
NZ_PYKA01000036.1	Protein Homology	CDS	28264	29712	.	-	0	ID=cds-WP_135369231.1;Parent=gene-C9E97_RS04575;Dbxref=GenBank:WP_135369231.1;Name=WP_135369231.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461717.1;locus_tag=C9E97_RS04575;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_135369231.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	29734	31002	.	-	.	ID=gene-C9E97_RS04580;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=C9E97_RS04580;old_locus_tag=C9E97_04710
NZ_PYKA01000036.1	Protein Homology	CDS	29734	31002	.	-	0	ID=cds-WP_135369232.1;Parent=gene-C9E97_RS04580;Dbxref=GenBank:WP_135369232.1;Name=WP_135369232.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461716.1;locus_tag=C9E97_RS04580;product=L-2-hydroxyglutarate oxidase;protein_id=WP_135369232.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	31028	32005	.	-	.	ID=gene-C9E97_RS04585;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=C9E97_RS04585;old_locus_tag=C9E97_04715
NZ_PYKA01000036.1	Protein Homology	CDS	31028	32005	.	-	0	ID=cds-WP_000993100.1;Parent=gene-C9E97_RS04585;Dbxref=GenBank:WP_000993100.1;Name=WP_000993100.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=C9E97_RS04585;product=glutarate dioxygenase GlaH;protein_id=WP_000993100.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	32309	33823	.	-	.	ID=gene-C9E97_RS04590;Name=C9E97_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04590;old_locus_tag=C9E97_04720
NZ_PYKA01000036.1	Protein Homology	CDS	32309	33823	.	-	0	ID=cds-WP_000382035.1;Parent=gene-C9E97_RS04590;Dbxref=GenBank:WP_000382035.1;Name=WP_000382035.1;Ontology_term=GO:0006810,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461714.1;locus_tag=C9E97_RS04590;product=tripartite tricarboxylate transporter permease;protein_id=WP_000382035.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	33834	34268	.	-	.	ID=gene-C9E97_RS04595;Name=C9E97_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04595;old_locus_tag=C9E97_04725
NZ_PYKA01000036.1	Protein Homology	CDS	33834	34268	.	-	0	ID=cds-WP_001574835.1;Parent=gene-C9E97_RS04595;Dbxref=GenBank:WP_001574835.1;Name=WP_001574835.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461713.3;locus_tag=C9E97_RS04595;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_001574835.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	34280	35257	.	-	.	ID=gene-C9E97_RS04600;Name=C9E97_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04600;old_locus_tag=C9E97_04730
NZ_PYKA01000036.1	Protein Homology	CDS	34280	35257	.	-	0	ID=cds-WP_000744416.1;Parent=gene-C9E97_RS04600;Dbxref=GenBank:WP_000744416.1;Name=WP_000744416.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=C9E97_RS04600;product=Bug family tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_000744416.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	35412	36086	.	+	.	ID=gene-C9E97_RS04605;Name=tctD;gbkey=Gene;gene=tctD;gene_biotype=protein_coding;locus_tag=C9E97_RS04605;old_locus_tag=C9E97_04735
NZ_PYKA01000036.1	Protein Homology	CDS	35412	36086	.	+	0	ID=cds-WP_001237934.1;Parent=gene-C9E97_RS04605;Dbxref=GenBank:WP_001237934.1;Name=WP_001237934.1;gbkey=CDS;gene=tctD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=C9E97_RS04605;product=transcriptional regulator TctD;protein_id=WP_001237934.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	36073	37488	.	+	.	ID=gene-C9E97_RS04610;Name=C9E97_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04610;old_locus_tag=C9E97_04740
NZ_PYKA01000036.1	Protein Homology	CDS	36073	37488	.	+	0	ID=cds-WP_000872348.1;Parent=gene-C9E97_RS04610;Dbxref=GenBank:WP_000872348.1;Name=WP_000872348.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461710.1;locus_tag=C9E97_RS04610;product=sensor histidine kinase;protein_id=WP_000872348.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	37621	38634	.	+	.	ID=gene-C9E97_RS04615;Name=C9E97_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04615;old_locus_tag=C9E97_04745
NZ_PYKA01000036.1	Protein Homology	CDS	37621	38634	.	+	0	ID=cds-WP_135369233.1;Parent=gene-C9E97_RS04615;Dbxref=GenBank:WP_135369233.1;Name=WP_135369233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461709.1;locus_tag=C9E97_RS04615;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_135369233.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	39356	40252	.	-	.	ID=gene-C9E97_RS04620;Name=C9E97_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04620;old_locus_tag=C9E97_04750
NZ_PYKA01000036.1	Protein Homology	CDS	39356	40252	.	-	0	ID=cds-WP_039589419.1;Parent=gene-C9E97_RS04620;Dbxref=GenBank:WP_039589419.1;Name=WP_039589419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461708.1;locus_tag=C9E97_RS04620;product=antimicrobial resistance protein Mig-14;protein_id=WP_039589419.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	40546	41475	.	-	.	ID=gene-C9E97_RS04630;Name=C9E97_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04630;old_locus_tag=C9E97_04760
NZ_PYKA01000036.1	Protein Homology	CDS	40546	41475	.	-	0	ID=cds-WP_031605029.1;Parent=gene-C9E97_RS04630;Dbxref=GenBank:WP_031605029.1;Name=WP_031605029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461707.1;locus_tag=C9E97_RS04630;product=VirK family antimicrobial peptide resistance protein;protein_id=WP_031605029.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	41994	43046	.	+	.	ID=gene-C9E97_RS04635;Name=pipB2;gbkey=Gene;gene=pipB2;gene_biotype=protein_coding;locus_tag=C9E97_RS04635;old_locus_tag=C9E97_04765
NZ_PYKA01000036.1	Protein Homology	CDS	41994	43046	.	+	0	ID=cds-WP_031605027.1;Parent=gene-C9E97_RS04635;Dbxref=GenBank:WP_031605027.1;Name=WP_031605027.1;gbkey=CDS;gene=pipB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461706.1;locus_tag=C9E97_RS04635;product=SPI-2 type III secretion system effector PipB2;protein_id=WP_031605027.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	43221	43553	.	+	.	ID=gene-C9E97_RS04640;Name=C9E97_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04640;old_locus_tag=C9E97_04770
NZ_PYKA01000036.1	Protein Homology	CDS	43221	43553	.	+	0	ID=cds-WP_077942173.1;Parent=gene-C9E97_RS04640;Dbxref=GenBank:WP_077942173.1;Name=WP_077942173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449164.1;locus_tag=C9E97_RS04640;product=hypothetical protein;protein_id=WP_077942173.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	44073	46247	.	+	.	ID=gene-C9E97_RS04650;Name=C9E97_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04650;old_locus_tag=C9E97_04780
NZ_PYKA01000036.1	Protein Homology	CDS	44073	46247	.	+	0	ID=cds-WP_276606050.1;Parent=gene-C9E97_RS04650;Dbxref=GenBank:WP_276606050.1;Name=WP_276606050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542215.1;locus_tag=C9E97_RS04650;product=TonB-dependent siderophore receptor;protein_id=WP_276606050.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	46289	47224	.	-	.	ID=gene-C9E97_RS04655;Name=C9E97_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04655;old_locus_tag=C9E97_04785
NZ_PYKA01000036.1	Protein Homology	CDS	46289	47224	.	-	0	ID=cds-WP_135369252.1;Parent=gene-C9E97_RS04655;Dbxref=GenBank:WP_135369252.1;Name=WP_135369252.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461703.1;locus_tag=C9E97_RS04655;product=alpha/beta hydrolase;protein_id=WP_135369252.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	47256	48500	.	-	.	ID=gene-C9E97_RS04660;Name=C9E97_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04660;old_locus_tag=C9E97_04790
NZ_PYKA01000036.1	Protein Homology	CDS	47256	48500	.	-	0	ID=cds-WP_135369253.1;Parent=gene-C9E97_RS04660;Dbxref=GenBank:WP_135369253.1;Name=WP_135369253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461702.1;locus_tag=C9E97_RS04660;product=esterase family protein;protein_id=WP_135369253.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	48610	52266	.	-	.	ID=gene-C9E97_RS04665;Name=iroC;gbkey=Gene;gene=iroC;gene_biotype=protein_coding;locus_tag=C9E97_RS04665;old_locus_tag=C9E97_04795
NZ_PYKA01000036.1	Protein Homology	CDS	48610	52266	.	-	0	ID=cds-WP_135369254.1;Parent=gene-C9E97_RS04665;Dbxref=GenBank:WP_135369254.1;Name=WP_135369254.1;gbkey=CDS;gene=iroC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461701.1;locus_tag=C9E97_RS04665;product=salmochelin/enterobactin export ABC transporter IroC;protein_id=WP_135369254.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	52347	53462	.	-	.	ID=gene-C9E97_RS04670;Name=iroB;gbkey=Gene;gene=iroB;gene_biotype=protein_coding;locus_tag=C9E97_RS04670;old_locus_tag=C9E97_04800
NZ_PYKA01000036.1	Protein Homology	CDS	52347	53462	.	-	0	ID=cds-WP_023260020.1;Parent=gene-C9E97_RS04670;Dbxref=GenBank:WP_023260020.1;Name=WP_023260020.1;gbkey=CDS;gene=iroB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461700.1;locus_tag=C9E97_RS04670;product=salmochelin biosynthesis C-glycosyltransferase IroB;protein_id=WP_023260020.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	54390	54617	.	+	.	ID=gene-C9E97_RS04685;Name=C9E97_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04685;old_locus_tag=C9E97_04815
NZ_PYKA01000036.1	Protein Homology	CDS	54390	54617	.	+	0	ID=cds-WP_001537512.1;Parent=gene-C9E97_RS04685;Dbxref=GenBank:WP_001537512.1;Name=WP_001537512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004140530.1;locus_tag=C9E97_RS04685;product=DUF1272 domain-containing protein;protein_id=WP_001537512.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	54931	55758	.	+	.	ID=gene-C9E97_RS04690;Name=C9E97_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04690;old_locus_tag=C9E97_04820
NZ_PYKA01000036.1	Protein Homology	CDS	54931	55758	.	+	0	ID=cds-WP_135369256.1;Parent=gene-C9E97_RS04690;Dbxref=GenBank:WP_135369256.1;Name=WP_135369256.1;Ontology_term=GO:0007165,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF025056.6;locus_tag=C9E97_RS04690;product=toll/interleukin-1 receptor domain-containing protein;protein_id=WP_135369256.1;transl_table=11
NZ_PYKA01000036.1	RefSeq	gene	55766	55881	.	-	.	ID=gene-C9E97_RS04695;Name=C9E97_RS04695;end_range=55881,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04695;old_locus_tag=C9E97_04825;partial=true
NZ_PYKA01000036.1	Protein Homology	CDS	55766	55881	.	-	2	ID=cds-WP_139376488.1;Parent=gene-C9E97_RS04695;Dbxref=GenBank:WP_139376488.1;Name=WP_139376488.1;Ontology_term=GO:0015074;end_range=55881,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543393.1;locus_tag=C9E97_RS04695;partial=true;product=integrase core domain-containing protein;protein_id=WP_139376488.1;transl_table=11
##sequence-region NZ_PYKA01000104.1 1 53048
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000104.1	RefSeq	region	1	53048	.	+	.	ID=NZ_PYKA01000104.1:1..53048;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000104.1	RefSeq	gene	120	500	.	+	.	ID=gene-C9E97_RS13925;Name=C9E97_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13925;old_locus_tag=C9E97_14225
NZ_PYKA01000104.1	Protein Homology	CDS	120	500	.	+	0	ID=cds-WP_023139942.1;Parent=gene-C9E97_RS13925;Dbxref=GenBank:WP_023139942.1;Name=WP_023139942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727015.1;locus_tag=C9E97_RS13925;product=hypothetical protein;protein_id=WP_023139942.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	548	1498	.	-	.	ID=gene-C9E97_RS13930;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=C9E97_RS13930;old_locus_tag=C9E97_14230
NZ_PYKA01000104.1	Protein Homology	CDS	548	1498	.	-	0	ID=cds-WP_000947139.1;Parent=gene-C9E97_RS13930;Dbxref=GenBank:WP_000947139.1;Name=WP_000947139.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=C9E97_RS13930;product=magnesium/cobalt transporter CorA;protein_id=WP_000947139.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	1654	1710	.	-	.	ID=gene-C9E97_RS23820;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=C9E97_RS23820
NZ_PYKA01000104.1	Protein Homology	CDS	1654	1710	.	-	0	ID=cds-WP_212723238.1;Parent=gene-C9E97_RS23820;Dbxref=GenBank:WP_212723238.1;Name=WP_212723238.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=C9E97_RS23820;product=YsgD/CorL family protein;protein_id=WP_212723238.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	1970	4132	.	-	.	ID=gene-C9E97_RS13940;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=C9E97_RS13940;old_locus_tag=C9E97_14240
NZ_PYKA01000104.1	Protein Homology	CDS	1970	4132	.	-	0	ID=cds-WP_000383436.1;Parent=gene-C9E97_RS13940;Dbxref=GenBank:WP_000383436.1;Name=WP_000383436.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462836.1;locus_tag=C9E97_RS13940;product=DNA helicase II;protein_id=WP_000383436.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	4268	4984	.	-	.	ID=gene-C9E97_RS13945;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=C9E97_RS13945;old_locus_tag=C9E97_14245
NZ_PYKA01000104.1	Protein Homology	CDS	4268	4984	.	-	0	ID=cds-WP_001213560.1;Parent=gene-C9E97_RS13945;Dbxref=GenBank:WP_001213560.1;Name=WP_001213560.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462835.1;locus_tag=C9E97_RS13945;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_001213560.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	4984	5886	.	-	.	ID=gene-C9E97_RS13950;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=C9E97_RS13950;old_locus_tag=C9E97_14250
NZ_PYKA01000104.1	Protein Homology	CDS	4984	5886	.	-	0	ID=cds-WP_000132874.1;Parent=gene-C9E97_RS13950;Dbxref=GenBank:WP_000132874.1;Name=WP_000132874.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462834.1;locus_tag=C9E97_RS13950;product=tyrosine recombinase XerC;protein_id=WP_000132874.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	5883	6590	.	-	.	ID=gene-C9E97_RS13955;Name=C9E97_RS13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13955;old_locus_tag=C9E97_14255
NZ_PYKA01000104.1	Protein Homology	CDS	5883	6590	.	-	0	ID=cds-WP_000812763.1;Parent=gene-C9E97_RS13955;Dbxref=GenBank:WP_000812763.1;Name=WP_000812763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462833.1;locus_tag=C9E97_RS13955;product=DUF484 domain-containing protein;protein_id=WP_000812763.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	6587	7411	.	-	.	ID=gene-C9E97_RS13960;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=C9E97_RS13960;old_locus_tag=C9E97_14260
NZ_PYKA01000104.1	Protein Homology	CDS	6587	7411	.	-	0	ID=cds-WP_001160671.1;Parent=gene-C9E97_RS13960;Dbxref=GenBank:WP_001160671.1;Name=WP_001160671.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=C9E97_RS13960;product=diaminopimelate epimerase;protein_id=WP_001160671.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	7448	7651	.	-	.	ID=gene-C9E97_RS13965;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=C9E97_RS13965;old_locus_tag=C9E97_14265
NZ_PYKA01000104.1	Protein Homology	CDS	7448	7651	.	-	0	ID=cds-WP_000799903.1;Parent=gene-C9E97_RS13965;Dbxref=GenBank:WP_000799903.1;Name=WP_000799903.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462831.1;locus_tag=C9E97_RS13965;product=LPS translocon maturation chaperone LptM;protein_id=WP_000799903.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	7837	8088	.	+	.	ID=gene-C9E97_RS23495;Name=C9E97_RS23495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23495;old_locus_tag=C9E97_14270
NZ_PYKA01000104.1	GeneMarkS-2+	CDS	7837	8088	.	+	0	ID=cds-WP_001621231.1;Parent=gene-C9E97_RS23495;Dbxref=GenBank:WP_001621231.1;Name=WP_001621231.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E97_RS23495;product=hypothetical protein;protein_id=WP_001621231.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	pseudogene	8058	8360	.	+	.	ID=gene-C9E97_RS13970;Name=C9E97_RS13970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS13970;old_locus_tag=C9E97_14275;partial=true;pseudo=true;start_range=.,8058
NZ_PYKA01000104.1	Protein Homology	CDS	8058	8360	.	+	0	ID=cds-C9E97_RS13970;Parent=gene-C9E97_RS13970;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200019.1;locus_tag=C9E97_RS13970;partial=true;product=hypothetical protein;pseudo=true;start_range=.,8058;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	8348	8737	.	+	.	ID=gene-C9E97_RS13975;Name=C9E97_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13975;old_locus_tag=C9E97_14280
NZ_PYKA01000104.1	Protein Homology	CDS	8348	8737	.	+	0	ID=cds-WP_135369566.1;Parent=gene-C9E97_RS13975;Dbxref=GenBank:WP_135369566.1;Name=WP_135369566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462830.1;locus_tag=C9E97_RS13975;product=DUF3021 family protein;protein_id=WP_135369566.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	8807	9127	.	+	.	ID=gene-C9E97_RS13980;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=C9E97_RS13980;old_locus_tag=C9E97_14285
NZ_PYKA01000104.1	Protein Homology	CDS	8807	9127	.	+	0	ID=cds-WP_000999921.1;Parent=gene-C9E97_RS13980;Dbxref=GenBank:WP_000999921.1;Name=WP_000999921.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=C9E97_RS13980;product=iron donor protein CyaY;protein_id=WP_000999921.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	9205	11751	.	-	.	ID=gene-C9E97_RS13985;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=C9E97_RS13985;old_locus_tag=C9E97_14290
NZ_PYKA01000104.1	Protein Homology	CDS	9205	11751	.	-	0	ID=cds-WP_000281718.1;Parent=gene-C9E97_RS13985;Dbxref=GenBank:WP_000281718.1;Name=WP_000281718.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462825.1;locus_tag=C9E97_RS13985;product=class I adenylate cyclase;protein_id=WP_000281718.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	12128	13069	.	+	.	ID=gene-C9E97_RS13990;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=C9E97_RS13990;old_locus_tag=C9E97_14295
NZ_PYKA01000104.1	Protein Homology	CDS	12128	13069	.	+	0	ID=cds-WP_001521319.1;Parent=gene-C9E97_RS13990;Dbxref=GenBank:WP_001521319.1;Name=WP_001521319.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=C9E97_RS13990;product=hydroxymethylbilane synthase;protein_id=WP_001521319.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	13066	13806	.	+	.	ID=gene-C9E97_RS13995;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=C9E97_RS13995;old_locus_tag=C9E97_14300
NZ_PYKA01000104.1	Protein Homology	CDS	13066	13806	.	+	0	ID=cds-WP_000025491.1;Parent=gene-C9E97_RS13995;Dbxref=GenBank:WP_000025491.1;Name=WP_000025491.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462823.1;locus_tag=C9E97_RS13995;product=uroporphyrinogen-III synthase;protein_id=WP_000025491.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	13828	14997	.	+	.	ID=gene-C9E97_RS14000;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=C9E97_RS14000;old_locus_tag=C9E97_14305
NZ_PYKA01000104.1	Protein Homology	CDS	13828	14997	.	+	0	ID=cds-WP_000138962.1;Parent=gene-C9E97_RS14000;Dbxref=GenBank:WP_000138962.1;Name=WP_000138962.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462822.1;locus_tag=C9E97_RS14000;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_000138962.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	15000	16196	.	+	.	ID=gene-C9E97_RS14005;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=C9E97_RS14005;old_locus_tag=C9E97_14310
NZ_PYKA01000104.1	Protein Homology	CDS	15000	16196	.	+	0	ID=cds-WP_031606719.1;Parent=gene-C9E97_RS14005;Dbxref=GenBank:WP_031606719.1;Name=WP_031606719.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=C9E97_RS14005;product=protoheme IX biogenesis protein HemY;protein_id=WP_031606719.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	16778	16854	.	-	.	ID=gene-C9E97_RS14010;Name=C9E97_RS14010;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS14010;old_locus_tag=C9E97_14315
NZ_PYKA01000104.1	tRNAscan-SE	tRNA	16778	16854	.	-	.	ID=rna-C9E97_RS14010;Parent=gene-C9E97_RS14010;anticodon=(pos:complement(16818..16820));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS14010;product=tRNA-Pro
NZ_PYKA01000104.1	tRNAscan-SE	exon	16778	16854	.	-	.	ID=exon-C9E97_RS14010-1;Parent=rna-C9E97_RS14010;anticodon=(pos:complement(16818..16820));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS14010;product=tRNA-Pro
NZ_PYKA01000104.1	RefSeq	gene	16897	16983	.	-	.	ID=gene-C9E97_RS14015;Name=C9E97_RS14015;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS14015;old_locus_tag=C9E97_14320
NZ_PYKA01000104.1	tRNAscan-SE	tRNA	16897	16983	.	-	.	ID=rna-C9E97_RS14015;Parent=gene-C9E97_RS14015;anticodon=(pos:complement(16947..16949));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS14015;product=tRNA-Leu
NZ_PYKA01000104.1	tRNAscan-SE	exon	16897	16983	.	-	.	ID=exon-C9E97_RS14015-1;Parent=rna-C9E97_RS14015;anticodon=(pos:complement(16947..16949));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS14015;product=tRNA-Leu
NZ_PYKA01000104.1	RefSeq	gene	17004	17079	.	-	.	ID=gene-C9E97_RS14020;Name=C9E97_RS14020;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS14020;old_locus_tag=C9E97_14325
NZ_PYKA01000104.1	tRNAscan-SE	tRNA	17004	17079	.	-	.	ID=rna-C9E97_RS14020;Parent=gene-C9E97_RS14020;anticodon=(pos:complement(17044..17046));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS14020;product=tRNA-His
NZ_PYKA01000104.1	tRNAscan-SE	exon	17004	17079	.	-	.	ID=exon-C9E97_RS14020-1;Parent=rna-C9E97_RS14020;anticodon=(pos:complement(17044..17046));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS14020;product=tRNA-His
NZ_PYKA01000104.1	RefSeq	gene	17134	17210	.	-	.	ID=gene-C9E97_RS14025;Name=C9E97_RS14025;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS14025;old_locus_tag=C9E97_14330
NZ_PYKA01000104.1	tRNAscan-SE	tRNA	17134	17210	.	-	.	ID=rna-C9E97_RS14025;Parent=gene-C9E97_RS14025;anticodon=(pos:complement(17174..17176));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS14025;product=tRNA-Arg
NZ_PYKA01000104.1	tRNAscan-SE	exon	17134	17210	.	-	.	ID=exon-C9E97_RS14025-1;Parent=rna-C9E97_RS14025;anticodon=(pos:complement(17174..17176));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS14025;product=tRNA-Arg
NZ_PYKA01000104.1	RefSeq	gene	17313	18698	.	-	.	ID=gene-C9E97_RS14030;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=C9E97_RS14030;old_locus_tag=C9E97_14335
NZ_PYKA01000104.1	Protein Homology	CDS	17313	18698	.	-	0	ID=cds-WP_000818378.1;Parent=gene-C9E97_RS14030;Dbxref=GenBank:WP_000818378.1;Name=WP_000818378.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462820.1;locus_tag=C9E97_RS14030;product=bifunctional threonine/serine APC transporter ThrP;protein_id=WP_000818378.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	18905	19645	.	-	.	ID=gene-C9E97_RS14035;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=C9E97_RS14035;old_locus_tag=C9E97_14340
NZ_PYKA01000104.1	Protein Homology	CDS	18905	19645	.	-	0	ID=cds-WP_000183623.1;Parent=gene-C9E97_RS14035;Dbxref=GenBank:WP_000183623.1;Name=WP_000183623.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462819.1;locus_tag=C9E97_RS14035;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_000183623.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	19642	21000	.	-	.	ID=gene-C9E97_RS14040;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=C9E97_RS14040;old_locus_tag=C9E97_14345
NZ_PYKA01000104.1	Protein Homology	CDS	19642	21000	.	-	0	ID=cds-WP_000055605.1;Parent=gene-C9E97_RS14040;Dbxref=GenBank:WP_000055605.1;Name=WP_000055605.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462818.1;locus_tag=C9E97_RS14040;product=ECA oligosaccharide polymerase;protein_id=WP_000055605.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	20997	22076	.	-	.	ID=gene-C9E97_RS14045;Name=C9E97_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14045;old_locus_tag=C9E97_14350
NZ_PYKA01000104.1	Protein Homology	CDS	20997	22076	.	-	0	ID=cds-WP_000217196.1;Parent=gene-C9E97_RS14045;Dbxref=GenBank:WP_000217196.1;Name=WP_000217196.1;Ontology_term=GO:0036065,GO:0008417;gbkey=CDS;go_function=fucosyltransferase activity|0008417||IEA;go_process=fucosylation|0036065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462817.1;locus_tag=C9E97_RS14045;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_000217196.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	22073	23323	.	-	.	ID=gene-C9E97_RS14050;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=C9E97_RS14050;old_locus_tag=C9E97_14355
NZ_PYKA01000104.1	Protein Homology	CDS	22073	23323	.	-	0	ID=cds-WP_000050294.1;Parent=gene-C9E97_RS14050;Dbxref=GenBank:WP_000050294.1;Name=WP_000050294.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462816.1;locus_tag=C9E97_RS14050;product=lipid III flippase WzxE;protein_id=WP_000050294.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	23325	24455	.	-	.	ID=gene-C9E97_RS14055;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=C9E97_RS14055;old_locus_tag=C9E97_14360
NZ_PYKA01000104.1	Protein Homology	CDS	23325	24455	.	-	0	ID=cds-WP_000612080.1;Parent=gene-C9E97_RS14055;Dbxref=GenBank:WP_000612080.1;Name=WP_000612080.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462815.1;locus_tag=C9E97_RS14055;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_000612080.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	24460	25137	.	-	.	ID=gene-C9E97_RS14060;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=C9E97_RS14060;old_locus_tag=C9E97_14365
NZ_PYKA01000104.1	Protein Homology	CDS	24460	25137	.	-	0	ID=cds-WP_001145157.1;Parent=gene-C9E97_RS14060;Dbxref=GenBank:WP_001145157.1;Name=WP_001145157.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=C9E97_RS14060;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_001145157.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	25115	25429	.	-	.	ID=gene-C9E97_RS23940;Name=C9E97_RS23940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23940;old_locus_tag=C9E97_14370
NZ_PYKA01000104.1	Protein Homology	CDS	25115	25429	.	-	0	ID=cds-WP_223149427.1;Parent=gene-C9E97_RS23940;Dbxref=GenBank:WP_223149427.1;Name=WP_223149427.1;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=C9E97_RS23940;product=sugar phosphate nucleotidyltransferase;protein_id=WP_223149427.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	25372	26439	.	-	.	ID=gene-C9E97_RS14070;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=C9E97_RS14070;old_locus_tag=C9E97_14375
NZ_PYKA01000104.1	Protein Homology	CDS	25372	26439	.	-	0	ID=cds-WP_000822152.1;Parent=gene-C9E97_RS14070;Dbxref=GenBank:WP_000822152.1;Name=WP_000822152.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462812.1;locus_tag=C9E97_RS14070;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_000822152.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	26439	27701	.	-	.	ID=gene-C9E97_RS14075;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=C9E97_RS14075;old_locus_tag=C9E97_14380
NZ_PYKA01000104.1	Protein Homology	CDS	26439	27701	.	-	0	ID=cds-WP_000011225.1;Parent=gene-C9E97_RS14075;Dbxref=GenBank:WP_000011225.1;Name=WP_000011225.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462811.1;locus_tag=C9E97_RS14075;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_000011225.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	27698	28828	.	-	.	ID=gene-C9E97_RS14080;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=C9E97_RS14080;old_locus_tag=C9E97_14385
NZ_PYKA01000104.1	Protein Homology	CDS	27698	28828	.	-	0	ID=cds-WP_000866685.1;Parent=gene-C9E97_RS14080;Dbxref=GenBank:WP_000866685.1;Name=WP_000866685.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462810.1;locus_tag=C9E97_RS14080;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_000866685.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	28884	29930	.	-	.	ID=gene-C9E97_RS14085;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=C9E97_RS14085;old_locus_tag=C9E97_14390
NZ_PYKA01000104.1	Protein Homology	CDS	28884	29930	.	-	0	ID=cds-WP_000193420.1;Parent=gene-C9E97_RS14085;Dbxref=GenBank:WP_000193420.1;Name=WP_000193420.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462809.1;locus_tag=C9E97_RS14085;product=ECA polysaccharide chain length modulation protein;protein_id=WP_000193420.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	29942	31045	.	-	.	ID=gene-C9E97_RS14090;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=C9E97_RS14090;old_locus_tag=C9E97_14395
NZ_PYKA01000104.1	Protein Homology	CDS	29942	31045	.	-	0	ID=cds-WP_000771937.1;Parent=gene-C9E97_RS14090;Dbxref=GenBank:WP_000771937.1;Name=WP_000771937.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462808.1;locus_tag=C9E97_RS14090;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_000771937.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	31275	32534	.	-	.	ID=gene-C9E97_RS14095;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=C9E97_RS14095;old_locus_tag=C9E97_14400
NZ_PYKA01000104.1	Protein Homology	CDS	31275	32534	.	-	0	ID=cds-WP_001054532.1;Parent=gene-C9E97_RS14095;Dbxref=GenBank:WP_001054532.1;Name=WP_001054532.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=C9E97_RS14095;product=transcription termination factor Rho;protein_id=WP_001054532.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	32622	32705	.	-	.	ID=gene-C9E97_RS23830;Name=C9E97_RS23830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23830
NZ_PYKA01000104.1	Protein Homology	CDS	32622	32705	.	-	0	ID=cds-WP_134820045.1;Parent=gene-C9E97_RS23830;Dbxref=GenBank:WP_134820045.1;Name=WP_134820045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=C9E97_RS23830;product=rho operon leader peptide;protein_id=WP_134820045.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	32953	33282	.	-	.	ID=gene-C9E97_RS14105;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=C9E97_RS14105;old_locus_tag=C9E97_14410
NZ_PYKA01000104.1	Protein Homology	CDS	32953	33282	.	-	0	ID=cds-WP_001280776.1;Parent=gene-C9E97_RS14105;Dbxref=GenBank:WP_001280776.1;Name=WP_001280776.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=C9E97_RS14105;product=thioredoxin TrxA;protein_id=WP_001280776.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	33426	34691	.	+	.	ID=gene-C9E97_RS14110;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=C9E97_RS14110;old_locus_tag=C9E97_14415
NZ_PYKA01000104.1	Protein Homology	CDS	33426	34691	.	+	0	ID=cds-WP_000047525.1;Parent=gene-C9E97_RS14110;Dbxref=GenBank:WP_000047525.1;Name=WP_000047525.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462805.1;locus_tag=C9E97_RS14110;product=ATP-dependent RNA helicase RhlB;protein_id=WP_000047525.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	34810	36291	.	+	.	ID=gene-C9E97_RS14115;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=C9E97_RS14115;old_locus_tag=C9E97_14425
NZ_PYKA01000104.1	Protein Homology	CDS	34810	36291	.	+	0	ID=cds-WP_001089447.1;Parent=gene-C9E97_RS14115;Dbxref=GenBank:WP_001089447.1;Name=WP_001089447.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462804.1;locus_tag=C9E97_RS14115;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_001089447.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	36331	38355	.	-	.	ID=gene-C9E97_RS14120;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=C9E97_RS14120;old_locus_tag=C9E97_14430
NZ_PYKA01000104.1	Protein Homology	CDS	36331	38355	.	-	0	ID=cds-WP_001238835.1;Parent=gene-C9E97_RS14120;Dbxref=GenBank:WP_001238835.1;Name=WP_001238835.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462803.1;locus_tag=C9E97_RS14120;product=DNA helicase Rep;protein_id=WP_001238835.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	pseudogene	38455	38592	.	-	.	ID=gene-C9E97_RS14125;Name=C9E97_RS14125;end_range=38592,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS14125;old_locus_tag=C9E97_14435;partial=true;pseudo=true
NZ_PYKA01000104.1	Protein Homology	CDS	38455	38592	.	-	0	ID=cds-C9E97_RS14125;Parent=gene-C9E97_RS14125;Note=involved in nicotinamide riboside transport%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=38592,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506088.1;locus_tag=C9E97_RS14125;partial=true;product=nicotinamide riboside transporter PnuC;pseudo=true;transl_table=11
NZ_PYKA01000104.1	RefSeq	pseudogene	38544	38699	.	-	.	ID=gene-C9E97_RS23995;Name=C9E97_RS23995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23995;partial=true;pseudo=true;start_range=.,38544
NZ_PYKA01000104.1	Protein Homology	CDS	38544	38699	.	-	0	ID=cds-C9E97_RS23995;Parent=gene-C9E97_RS23995;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442089.1;locus_tag=C9E97_RS23995;partial=true;product=Crp/Fnr family transcriptional regulator;pseudo=true;start_range=.,38544;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	38893	39174	.	+	.	ID=gene-C9E97_RS14135;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=C9E97_RS14135;old_locus_tag=C9E97_14445
NZ_PYKA01000104.1	Protein Homology	CDS	38893	39174	.	+	0	ID=cds-WP_001096806.1;Parent=gene-C9E97_RS14135;Dbxref=GenBank:WP_001096806.1;Name=WP_001096806.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462801.1;locus_tag=C9E97_RS14135;product=peptidylprolyl isomerase PpiC;protein_id=WP_001096806.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	39266	40741	.	-	.	ID=gene-C9E97_RS14140;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=C9E97_RS14140;old_locus_tag=C9E97_14450
NZ_PYKA01000104.1	Protein Homology	CDS	39266	40741	.	-	0	ID=cds-WP_135369567.1;Parent=gene-C9E97_RS14140;Dbxref=GenBank:WP_135369567.1;Name=WP_135369567.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=C9E97_RS14140;product=ketol-acid reductoisomerase;protein_id=WP_135369567.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	40906	41793	.	+	.	ID=gene-C9E97_RS14145;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=C9E97_RS14145;old_locus_tag=C9E97_14455
NZ_PYKA01000104.1	Protein Homology	CDS	40906	41793	.	+	0	ID=cds-WP_000365798.1;Parent=gene-C9E97_RS14145;Dbxref=GenBank:WP_000365798.1;Name=WP_000365798.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462799.1;locus_tag=C9E97_RS14145;product=HTH-type transcriptional activator IlvY;protein_id=WP_000365798.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	41796	42137	.	-	.	ID=gene-C9E97_RS14150;Name=C9E97_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14150;old_locus_tag=C9E97_14460
NZ_PYKA01000104.1	Protein Homology	CDS	41796	42137	.	-	0	ID=cds-WP_000560824.1;Parent=gene-C9E97_RS14150;Dbxref=GenBank:WP_000560824.1;Name=WP_000560824.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462798.1;locus_tag=C9E97_RS14150;product=helix-turn-helix domain-containing protein;protein_id=WP_000560824.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	42134	42451	.	-	.	ID=gene-C9E97_RS14155;Name=C9E97_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14155;old_locus_tag=C9E97_14465
NZ_PYKA01000104.1	Protein Homology	CDS	42134	42451	.	-	0	ID=cds-WP_000535852.1;Parent=gene-C9E97_RS14155;Dbxref=GenBank:WP_000535852.1;Name=WP_000535852.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462797.1;locus_tag=C9E97_RS14155;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_000535852.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	42734	44278	.	-	.	ID=gene-C9E97_RS14160;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=C9E97_RS14160;old_locus_tag=C9E97_14470
NZ_PYKA01000104.1	Protein Homology	CDS	42734	44278	.	-	0	ID=cds-WP_001518457.1;Parent=gene-C9E97_RS14160;Dbxref=GenBank:WP_001518457.1;Name=WP_001518457.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462796.1;locus_tag=C9E97_RS14160;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_001518457.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	44281	46131	.	-	.	ID=gene-C9E97_RS14165;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=C9E97_RS14165;old_locus_tag=C9E97_14475
NZ_PYKA01000104.1	Protein Homology	CDS	44281	46131	.	-	0	ID=cds-WP_001127436.1;Parent=gene-C9E97_RS14165;Dbxref=GenBank:WP_001127436.1;Name=WP_001127436.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=C9E97_RS14165;product=dihydroxy-acid dehydratase;protein_id=WP_001127436.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	46291	47220	.	-	.	ID=gene-C9E97_RS14170;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=C9E97_RS14170;old_locus_tag=C9E97_14480
NZ_PYKA01000104.1	Protein Homology	CDS	46291	47220	.	-	0	ID=cds-WP_000208532.1;Parent=gene-C9E97_RS14170;Dbxref=GenBank:WP_000208532.1;Name=WP_000208532.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462794.1;locus_tag=C9E97_RS14170;product=branched-chain-amino-acid transaminase;protein_id=WP_000208532.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	47238	47501	.	-	.	ID=gene-C9E97_RS14175;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=C9E97_RS14175;old_locus_tag=C9E97_14485
NZ_PYKA01000104.1	Protein Homology	CDS	47238	47501	.	-	0	ID=cds-WP_000983260.1;Parent=gene-C9E97_RS14175;Dbxref=GenBank:WP_000983260.1;Name=WP_000983260.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=C9E97_RS14175;product=acetolactate synthase 2 small subunit;protein_id=WP_000983260.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	47498	49144	.	-	.	ID=gene-C9E97_RS14180;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=C9E97_RS14180;old_locus_tag=C9E97_14490
NZ_PYKA01000104.1	Protein Homology	CDS	47498	49144	.	-	0	ID=cds-WP_001012561.1;Parent=gene-C9E97_RS14180;Dbxref=GenBank:WP_001012561.1;Name=WP_001012561.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=C9E97_RS14180;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_001012561.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	49147	49197	.	-	.	ID=gene-C9E97_RS23575;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=C9E97_RS23575
NZ_PYKA01000104.1	Protein Homology	CDS	49147	49197	.	-	0	ID=cds-WP_192930503.1;Parent=gene-C9E97_RS23575;Dbxref=GenBank:WP_192930503.1;Name=WP_192930503.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: protein motif:HMM:NF038286.1;locus_tag=C9E97_RS23575;product=peptide IlvX;protein_id=WP_192930503.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	49284	49382	.	-	.	ID=gene-C9E97_RS14185;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=C9E97_RS14185;old_locus_tag=C9E97_14495
NZ_PYKA01000104.1	Protein Homology	CDS	49284	49382	.	-	0	ID=cds-WP_001311244.1;Parent=gene-C9E97_RS14185;Dbxref=GenBank:WP_001311244.1;Name=WP_001311244.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=C9E97_RS14185;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	49734	51254	.	+	.	ID=gene-C9E97_RS14195;Name=C9E97_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14195;old_locus_tag=C9E97_14500
NZ_PYKA01000104.1	Protein Homology	CDS	49734	51254	.	+	0	ID=cds-WP_023206359.1;Parent=gene-C9E97_RS14195;Dbxref=GenBank:WP_023206359.1;Name=WP_023206359.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=C9E97_RS14195;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_023206359.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	51279	51617	.	-	.	ID=gene-C9E97_RS14200;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=C9E97_RS14200;old_locus_tag=C9E97_14505
NZ_PYKA01000104.1	Protein Homology	CDS	51279	51617	.	-	0	ID=cds-WP_000840996.1;Parent=gene-C9E97_RS14200;Dbxref=GenBank:WP_000840996.1;Name=WP_000840996.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462789.1;locus_tag=C9E97_RS14200;product=macrodomain Ori organization protein MaoP;protein_id=WP_000840996.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	51724	52572	.	+	.	ID=gene-C9E97_RS14205;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=C9E97_RS14205;old_locus_tag=C9E97_14510
NZ_PYKA01000104.1	Protein Homology	CDS	51724	52572	.	+	0	ID=cds-WP_001541181.1;Parent=gene-C9E97_RS14205;Dbxref=GenBank:WP_001541181.1;Name=WP_001541181.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462788.3;locus_tag=C9E97_RS14205;product=HTH-type transcriptional regulator HdfR;protein_id=WP_001541181.1;transl_table=11
NZ_PYKA01000104.1	RefSeq	gene	52673	52748	.	-	.	ID=gene-C9E97_RS14210;Name=C9E97_RS14210;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS14210;old_locus_tag=C9E97_14515
NZ_PYKA01000104.1	tRNAscan-SE	tRNA	52673	52748	.	-	.	ID=rna-C9E97_RS14210;Parent=gene-C9E97_RS14210;anticodon=(pos:complement(52713..52715));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS14210;product=tRNA-Trp
NZ_PYKA01000104.1	tRNAscan-SE	exon	52673	52748	.	-	.	ID=exon-C9E97_RS14210-1;Parent=rna-C9E97_RS14210;anticodon=(pos:complement(52713..52715));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS14210;product=tRNA-Trp
NZ_PYKA01000104.1	RefSeq	gene	52757	52833	.	-	.	ID=gene-C9E97_RS14215;Name=C9E97_RS14215;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS14215;old_locus_tag=C9E97_14520
NZ_PYKA01000104.1	tRNAscan-SE	tRNA	52757	52833	.	-	.	ID=rna-C9E97_RS14215;Parent=gene-C9E97_RS14215;anticodon=(pos:complement(52797..52799));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS14215;product=tRNA-Asp
NZ_PYKA01000104.1	tRNAscan-SE	exon	52757	52833	.	-	.	ID=exon-C9E97_RS14215-1;Parent=rna-C9E97_RS14215;anticodon=(pos:complement(52797..52799));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS14215;product=tRNA-Asp
NZ_PYKA01000104.1	RefSeq	gene	52888	53003	.	-	.	ID=gene-C9E97_RS14220;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9E97_RS14220;old_locus_tag=C9E97_14525
NZ_PYKA01000104.1	cmsearch	rRNA	52888	53003	.	-	.	ID=rna-C9E97_RS14220;Parent=gene-C9E97_RS14220;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS14220;product=5S ribosomal RNA
NZ_PYKA01000104.1	cmsearch	exon	52888	53003	.	-	.	ID=exon-C9E97_RS14220-1;Parent=rna-C9E97_RS14220;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS14220;product=5S ribosomal RNA
##sequence-region NZ_PYKA01000129.1 1 52844
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000129.1	RefSeq	region	1	52844	.	+	.	ID=NZ_PYKA01000129.1:1..52844;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000129.1	RefSeq	gene	84	160	.	+	.	ID=gene-C9E97_RS20905;Name=C9E97_RS20905;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS20905;old_locus_tag=C9E97_21400
NZ_PYKA01000129.1	tRNAscan-SE	tRNA	84	160	.	+	.	ID=rna-C9E97_RS20905;Parent=gene-C9E97_RS20905;anticodon=(pos:118..120);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS20905;product=tRNA-Met
NZ_PYKA01000129.1	tRNAscan-SE	exon	84	160	.	+	.	ID=exon-C9E97_RS20905-1;Parent=rna-C9E97_RS20905;anticodon=(pos:118..120);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS20905;product=tRNA-Met
NZ_PYKA01000129.1	RefSeq	gene	273	1526	.	-	.	ID=gene-C9E97_RS20910;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=C9E97_RS20910;old_locus_tag=C9E97_21405
NZ_PYKA01000129.1	Protein Homology	CDS	273	1526	.	-	0	ID=cds-WP_000011919.1;Parent=gene-C9E97_RS20910;Dbxref=GenBank:WP_000011919.1;Name=WP_000011919.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461908.1;locus_tag=C9E97_RS20910;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_000011919.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	1759	3090	.	+	.	ID=gene-C9E97_RS20915;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=C9E97_RS20915;old_locus_tag=C9E97_21410
NZ_PYKA01000129.1	Protein Homology	CDS	1759	3090	.	+	0	ID=cds-WP_000588964.1;Parent=gene-C9E97_RS20915;Dbxref=GenBank:WP_000588964.1;Name=WP_000588964.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461909.1;locus_tag=C9E97_RS20915;product=amino-acid N-acetyltransferase;protein_id=WP_000588964.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	3193	5028	.	-	.	ID=gene-C9E97_RS20920;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=C9E97_RS20920;old_locus_tag=C9E97_21415
NZ_PYKA01000129.1	Protein Homology	CDS	3193	5028	.	-	0	ID=cds-WP_000155134.1;Parent=gene-C9E97_RS20920;Dbxref=GenBank:WP_000155134.1;Name=WP_000155134.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155145.1;locus_tag=C9E97_RS20920;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_000155134.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	5025	8570	.	-	.	ID=gene-C9E97_RS20925;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=C9E97_RS20925;old_locus_tag=C9E97_21420
NZ_PYKA01000129.1	Protein Homology	CDS	5025	8570	.	-	0	ID=cds-WP_001000533.1;Parent=gene-C9E97_RS20925;Dbxref=GenBank:WP_001000533.1;Name=WP_001000533.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461911.1;locus_tag=C9E97_RS20925;product=exodeoxyribonuclease V subunit beta;protein_id=WP_001000533.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	8563	11451	.	-	.	ID=gene-C9E97_RS20930;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=C9E97_RS20930;old_locus_tag=C9E97_21425
NZ_PYKA01000129.1	Protein Homology	CDS	8563	11451	.	-	0	ID=cds-WP_135369238.1;Parent=gene-C9E97_RS20930;Dbxref=GenBank:WP_135369238.1;Name=WP_135369238.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461912.1;locus_tag=C9E97_RS20930;product=pitrilysin;protein_id=WP_135369238.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	11629	15000	.	-	.	ID=gene-C9E97_RS20935;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=C9E97_RS20935;old_locus_tag=C9E97_21430
NZ_PYKA01000129.1	Protein Homology	CDS	11629	15000	.	-	0	ID=cds-WP_079973488.1;Parent=gene-C9E97_RS20935;Dbxref=GenBank:WP_079973488.1;Name=WP_079973488.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461913.2;locus_tag=C9E97_RS20935;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_079973488.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	15016	15336	.	-	.	ID=gene-C9E97_RS20940;Name=C9E97_RS20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20940;old_locus_tag=C9E97_21435
NZ_PYKA01000129.1	Protein Homology	CDS	15016	15336	.	-	0	ID=cds-WP_000019286.1;Parent=gene-C9E97_RS20940;Dbxref=GenBank:WP_000019286.1;Name=WP_000019286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461914.1;locus_tag=C9E97_RS20940;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_000019286.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	15321	15728	.	-	.	ID=gene-C9E97_RS20945;Name=C9E97_RS20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20945;old_locus_tag=C9E97_21440
NZ_PYKA01000129.1	Protein Homology	CDS	15321	15728	.	-	0	ID=cds-WP_001078536.1;Parent=gene-C9E97_RS20945;Dbxref=GenBank:WP_001078536.1;Name=WP_001078536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461915.1;locus_tag=C9E97_RS20945;product=DUF2509 family protein;protein_id=WP_001078536.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	15725	16288	.	-	.	ID=gene-C9E97_RS20950;Name=C9E97_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20950;old_locus_tag=C9E97_21445
NZ_PYKA01000129.1	Protein Homology	CDS	15725	16288	.	-	0	ID=cds-WP_000029152.1;Parent=gene-C9E97_RS20950;Dbxref=GenBank:WP_000029152.1;Name=WP_000029152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461916.1;locus_tag=C9E97_RS20950;product=prepilin peptidase-dependent protein;protein_id=WP_000029152.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	16279	16749	.	-	.	ID=gene-C9E97_RS20955;Name=C9E97_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20955;old_locus_tag=C9E97_21450
NZ_PYKA01000129.1	Protein Homology	CDS	16279	16749	.	-	0	ID=cds-WP_135369237.1;Parent=gene-C9E97_RS20955;Dbxref=GenBank:WP_135369237.1;Name=WP_135369237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077605.1;locus_tag=C9E97_RS20955;product=prepilin peptidase-dependent protein;protein_id=WP_135369237.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	16934	17728	.	-	.	ID=gene-C9E97_RS20965;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=C9E97_RS20965;old_locus_tag=C9E97_21460
NZ_PYKA01000129.1	Protein Homology	CDS	16934	17728	.	-	0	ID=cds-WP_000816247.1;Parent=gene-C9E97_RS20965;Dbxref=GenBank:WP_000816247.1;Name=WP_000816247.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=C9E97_RS20965;product=thymidylate synthase;protein_id=WP_000816247.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	17735	18610	.	-	.	ID=gene-C9E97_RS20970;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=C9E97_RS20970;old_locus_tag=C9E97_21465
NZ_PYKA01000129.1	Protein Homology	CDS	17735	18610	.	-	0	ID=cds-WP_000204645.1;Parent=gene-C9E97_RS20970;Dbxref=GenBank:WP_000204645.1;Name=WP_000204645.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461919.1;locus_tag=C9E97_RS20970;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204645.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	18826	21072	.	-	.	ID=gene-C9E97_RS20975;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=C9E97_RS20975;old_locus_tag=C9E97_21470
NZ_PYKA01000129.1	Protein Homology	CDS	18826	21072	.	-	0	ID=cds-WP_000957888.1;Parent=gene-C9E97_RS20975;Dbxref=GenBank:WP_000957888.1;Name=WP_000957888.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461920.1;locus_tag=C9E97_RS20975;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000957888.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	21085	21615	.	-	.	ID=gene-C9E97_RS20980;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=C9E97_RS20980;old_locus_tag=C9E97_21475
NZ_PYKA01000129.1	Protein Homology	CDS	21085	21615	.	-	0	ID=cds-WP_000564481.1;Parent=gene-C9E97_RS20980;Dbxref=GenBank:WP_000564481.1;Name=WP_000564481.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=C9E97_RS20980;product=RNA pyrophosphohydrolase;protein_id=WP_000564481.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	22298	22993	.	+	.	ID=gene-C9E97_RS20985;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=C9E97_RS20985;old_locus_tag=C9E97_21480
NZ_PYKA01000129.1	Protein Homology	CDS	22298	22993	.	+	0	ID=cds-WP_001274930.1;Parent=gene-C9E97_RS20985;Dbxref=GenBank:WP_001274930.1;Name=WP_001274930.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461922.1;locus_tag=C9E97_RS20985;product=DNA mismatch repair endonuclease MutH;protein_id=WP_001274930.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	23175	23888	.	+	.	ID=gene-C9E97_RS20990;Name=C9E97_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20990;old_locus_tag=C9E97_21485
NZ_PYKA01000129.1	Protein Homology	CDS	23175	23888	.	+	0	ID=cds-WP_000895635.1;Parent=gene-C9E97_RS20990;Dbxref=GenBank:WP_000895635.1;Name=WP_000895635.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461923.1;locus_tag=C9E97_RS20990;product=TerC family protein;protein_id=WP_000895635.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	24058	24276	.	+	.	ID=gene-C9E97_RS20995;Name=C9E97_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20995;old_locus_tag=C9E97_21490
NZ_PYKA01000129.1	Protein Homology	CDS	24058	24276	.	+	0	ID=cds-WP_000758662.1;Parent=gene-C9E97_RS20995;Dbxref=GenBank:WP_000758662.1;Name=WP_000758662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461924.1;locus_tag=C9E97_RS20995;product=YgdI/YgdR family lipoprotein;protein_id=WP_000758662.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	24467	25507	.	+	.	ID=gene-C9E97_RS21000;Name=C9E97_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21000;old_locus_tag=C9E97_21495
NZ_PYKA01000129.1	Protein Homology	CDS	24467	25507	.	+	0	ID=cds-WP_079802339.1;Parent=gene-C9E97_RS21000;Dbxref=GenBank:WP_079802339.1;Name=WP_079802339.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461925.1;locus_tag=C9E97_RS21000;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_079802339.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	25594	26796	.	-	.	ID=gene-C9E97_RS21005;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=C9E97_RS21005;old_locus_tag=C9E97_21500
NZ_PYKA01000129.1	Protein Homology	CDS	25594	26796	.	-	0	ID=cds-WP_135369236.1;Parent=gene-C9E97_RS21005;Dbxref=GenBank:WP_135369236.1;Name=WP_135369236.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461926.1;locus_tag=C9E97_RS21005;product=lysophospholipid transporter LplT;protein_id=WP_135369236.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	26789	28948	.	-	.	ID=gene-C9E97_RS21010;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=C9E97_RS21010;old_locus_tag=C9E97_21505
NZ_PYKA01000129.1	Protein Homology	CDS	26789	28948	.	-	0	ID=cds-WP_000896101.1;Parent=gene-C9E97_RS21010;Dbxref=GenBank:WP_000896101.1;Name=WP_000896101.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461927.1;locus_tag=C9E97_RS21010;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_000896101.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	29541	30569	.	+	.	ID=gene-C9E97_RS21020;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=C9E97_RS21020;old_locus_tag=C9E97_21510
NZ_PYKA01000129.1	Protein Homology	CDS	29541	30569	.	+	0	ID=cds-WP_000201030.1;Parent=gene-C9E97_RS21020;Dbxref=GenBank:WP_000201030.1;Name=WP_000201030.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461928.1;locus_tag=C9E97_RS21020;product=HTH-type transcriptional regulator GalR;protein_id=WP_000201030.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	30580	31602	.	+	.	ID=gene-C9E97_RS21025;Name=C9E97_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21025;old_locus_tag=C9E97_21515
NZ_PYKA01000129.1	Protein Homology	CDS	30580	31602	.	+	0	ID=cds-WP_000968338.1;Parent=gene-C9E97_RS21025;Dbxref=GenBank:WP_000968338.1;Name=WP_000968338.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461929.1;locus_tag=C9E97_RS21025;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000968338.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	31612	32874	.	-	.	ID=gene-C9E97_RS21030;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=C9E97_RS21030;old_locus_tag=C9E97_21520
NZ_PYKA01000129.1	Protein Homology	CDS	31612	32874	.	-	0	ID=cds-WP_135369235.1;Parent=gene-C9E97_RS21030;Dbxref=GenBank:WP_135369235.1;Name=WP_135369235.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461930.1;locus_tag=C9E97_RS21030;product=diaminopimelate decarboxylase;protein_id=WP_135369235.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	32992	33927	.	+	.	ID=gene-C9E97_RS21035;Name=C9E97_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21035;old_locus_tag=C9E97_21525
NZ_PYKA01000129.1	Protein Homology	CDS	32992	33927	.	+	0	ID=cds-WP_000741798.1;Parent=gene-C9E97_RS21035;Dbxref=GenBank:WP_000741798.1;Name=WP_000741798.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461931.1;locus_tag=C9E97_RS21035;product=LysR family transcriptional regulator;protein_id=WP_000741798.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	33899	34606	.	-	.	ID=gene-C9E97_RS21040;Name=C9E97_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21040;old_locus_tag=C9E97_21530
NZ_PYKA01000129.1	Protein Homology	CDS	33899	34606	.	-	0	ID=cds-WP_000848633.1;Parent=gene-C9E97_RS21040;Dbxref=GenBank:WP_000848633.1;Name=WP_000848633.1;Ontology_term=GO:0008152,GO:0016855;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461932.1;locus_tag=C9E97_RS21040;product=aspartate/glutamate racemase;protein_id=WP_000848633.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	34719	36137	.	-	.	ID=gene-C9E97_RS21045;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=C9E97_RS21045;old_locus_tag=C9E97_21535
NZ_PYKA01000129.1	Protein Homology	CDS	34719	36137	.	-	0	ID=cds-WP_000253650.1;Parent=gene-C9E97_RS21045;Dbxref=GenBank:WP_000253650.1;Name=WP_000253650.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461933.1;locus_tag=C9E97_RS21045;product=arabinose-proton symporter AraE;protein_id=WP_000253650.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	36491	37252	.	-	.	ID=gene-C9E97_RS21050;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=C9E97_RS21050;old_locus_tag=C9E97_21540
NZ_PYKA01000129.1	Protein Homology	CDS	36491	37252	.	-	0	ID=cds-WP_000602478.1;Parent=gene-C9E97_RS21050;Dbxref=GenBank:WP_000602478.1;Name=WP_000602478.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461934.1;locus_tag=C9E97_RS21050;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_000602478.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	37309	38145	.	-	.	ID=gene-C9E97_RS21055;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=C9E97_RS21055;old_locus_tag=C9E97_21545
NZ_PYKA01000129.1	Protein Homology	CDS	37309	38145	.	-	0	ID=cds-WP_000383270.1;Parent=gene-C9E97_RS21055;Dbxref=GenBank:WP_000383270.1;Name=WP_000383270.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461935.1;locus_tag=C9E97_RS21055;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_000383270.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	38576	39754	.	-	.	ID=gene-C9E97_RS21065;Name=C9E97_RS21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21065;old_locus_tag=C9E97_21560
NZ_PYKA01000129.1	Protein Homology	CDS	38576	39754	.	-	0	ID=cds-WP_000665980.1;Parent=gene-C9E97_RS21065;Dbxref=GenBank:WP_000665980.1;Name=WP_000665980.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461936.1;locus_tag=C9E97_RS21065;product=acetyl-CoA C-acetyltransferase;protein_id=WP_000665980.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	39877	40740	.	-	.	ID=gene-C9E97_RS21070;Name=C9E97_RS21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21070;old_locus_tag=C9E97_21565
NZ_PYKA01000129.1	Protein Homology	CDS	39877	40740	.	-	0	ID=cds-WP_001270774.1;Parent=gene-C9E97_RS21070;Dbxref=GenBank:WP_001270774.1;Name=WP_001270774.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461937.1;locus_tag=C9E97_RS21070;product=LysR family transcriptional regulator;protein_id=WP_001270774.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	40844	41299	.	+	.	ID=gene-C9E97_RS21075;Name=C9E97_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21075;old_locus_tag=C9E97_21570
NZ_PYKA01000129.1	Protein Homology	CDS	40844	41299	.	+	0	ID=cds-WP_001519547.1;Parent=gene-C9E97_RS21075;Dbxref=GenBank:WP_001519547.1;Name=WP_001519547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465480.1;locus_tag=C9E97_RS21075;product=multidrug/biocide efflux PACE transporter;protein_id=WP_001519547.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	41441	42670	.	+	.	ID=gene-C9E97_RS21080;Name=C9E97_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21080;old_locus_tag=C9E97_21575
NZ_PYKA01000129.1	Protein Homology	CDS	41441	42670	.	+	0	ID=cds-WP_000036837.1;Parent=gene-C9E97_RS21080;Dbxref=GenBank:WP_000036837.1;Name=WP_000036837.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461939.1;locus_tag=C9E97_RS21080;product=amino acid permease;protein_id=WP_000036837.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	42701	42973	.	-	.	ID=gene-C9E97_RS21085;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=C9E97_RS21085;old_locus_tag=C9E97_21580
NZ_PYKA01000129.1	Protein Homology	CDS	42701	42973	.	-	0	ID=cds-WP_000019953.1;Parent=gene-C9E97_RS21085;Dbxref=GenBank:WP_000019953.1;Name=WP_000019953.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461940.1;locus_tag=C9E97_RS21085;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=WP_000019953.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	43096	43938	.	+	.	ID=gene-C9E97_RS21090;Name=C9E97_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21090;old_locus_tag=C9E97_21585
NZ_PYKA01000129.1	Protein Homology	CDS	43096	43938	.	+	0	ID=cds-WP_135369234.1;Parent=gene-C9E97_RS21090;Dbxref=GenBank:WP_135369234.1;Name=WP_135369234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461941.1;locus_tag=C9E97_RS21090;product=nickel/cobalt efflux protein RcnA;protein_id=WP_135369234.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	44148	44906	.	-	.	ID=gene-C9E97_RS21095;Name=C9E97_RS21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21095;old_locus_tag=C9E97_21590
NZ_PYKA01000129.1	Protein Homology	CDS	44148	44906	.	-	0	ID=cds-WP_000134800.1;Parent=gene-C9E97_RS21095;Dbxref=GenBank:WP_000134800.1;Name=WP_000134800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461942.1;locus_tag=C9E97_RS21095;product=transcriptional regulator;protein_id=WP_000134800.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	44893	45405	.	-	.	ID=gene-C9E97_RS21100;Name=C9E97_RS21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21100;old_locus_tag=C9E97_21595
NZ_PYKA01000129.1	Protein Homology	CDS	44893	45405	.	-	0	ID=cds-WP_000336257.1;Parent=gene-C9E97_RS21100;Dbxref=GenBank:WP_000336257.1;Name=WP_000336257.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727965.1;locus_tag=C9E97_RS21100;product=CaiF/GrlA family transcriptional regulator;protein_id=WP_000336257.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	45549	46625	.	-	.	ID=gene-C9E97_RS21105;Name=C9E97_RS21105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21105;old_locus_tag=C9E97_21600
NZ_PYKA01000129.1	Protein Homology	CDS	45549	46625	.	-	0	ID=cds-WP_135369141.1;Parent=gene-C9E97_RS21105;Dbxref=GenBank:WP_135369141.1;Name=WP_135369141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461943.1;locus_tag=C9E97_RS21105;product=hypothetical protein;protein_id=WP_135369141.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	46622	47365	.	-	.	ID=gene-C9E97_RS21110;Name=stdC;gbkey=Gene;gene=stdC;gene_biotype=protein_coding;locus_tag=C9E97_RS21110;old_locus_tag=C9E97_21605
NZ_PYKA01000129.1	Protein Homology	CDS	46622	47365	.	-	0	ID=cds-WP_000798502.1;Parent=gene-C9E97_RS21110;Dbxref=GenBank:WP_000798502.1;Name=WP_000798502.1;gbkey=CDS;gene=stdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461944.1;locus_tag=C9E97_RS21110;product=fimbrial biogenesis chaperone StdC;protein_id=WP_000798502.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	47406	49895	.	-	.	ID=gene-C9E97_RS21115;Name=stdB;gbkey=Gene;gene=stdB;gene_biotype=protein_coding;locus_tag=C9E97_RS21115;old_locus_tag=C9E97_21610
NZ_PYKA01000129.1	Protein Homology	CDS	47406	49895	.	-	0	ID=cds-WP_135369142.1;Parent=gene-C9E97_RS21115;Dbxref=GenBank:WP_135369142.1;Name=WP_135369142.1;gbkey=CDS;gene=stdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461945.1;locus_tag=C9E97_RS21115;product=fimbrial outer membrane usher protein StdB;protein_id=WP_135369142.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	50015	50602	.	-	.	ID=gene-C9E97_RS21120;Name=C9E97_RS21120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21120;old_locus_tag=C9E97_21615
NZ_PYKA01000129.1	Protein Homology	CDS	50015	50602	.	-	0	ID=cds-WP_001244645.1;Parent=gene-C9E97_RS21120;Dbxref=GenBank:WP_001244645.1;Name=WP_001244645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001244645.1;locus_tag=C9E97_RS21120;product=fimbrial protein;protein_id=WP_001244645.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	51321	51953	.	-	.	ID=gene-C9E97_RS21125;Name=C9E97_RS21125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21125;old_locus_tag=C9E97_21620
NZ_PYKA01000129.1	Protein Homology	CDS	51321	51953	.	-	0	ID=cds-WP_000835259.1;Parent=gene-C9E97_RS21125;Dbxref=GenBank:WP_000835259.1;Name=WP_000835259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461947.1;locus_tag=C9E97_RS21125;product=YfdX family protein;protein_id=WP_000835259.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	52000	52536	.	-	.	ID=gene-C9E97_RS21130;Name=C9E97_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21130;old_locus_tag=C9E97_21625
NZ_PYKA01000129.1	Protein Homology	CDS	52000	52536	.	-	0	ID=cds-WP_001038500.1;Parent=gene-C9E97_RS21130;Dbxref=GenBank:WP_001038500.1;Name=WP_001038500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461948.1;locus_tag=C9E97_RS21130;product=STM3031 family outer membrane protein;protein_id=WP_001038500.1;transl_table=11
NZ_PYKA01000129.1	RefSeq	gene	52582	52844	.	-	.	ID=gene-C9E97_RS23595;Name=C9E97_RS23595;end_range=52844,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23595;old_locus_tag=C9E97_21630;partial=true
NZ_PYKA01000129.1	GeneMarkS-2+	CDS	52582	52844	.	-	2	ID=cds-WP_245304076.1;Parent=gene-C9E97_RS23595;Dbxref=GenBank:WP_245304076.1;Name=WP_245304076.1;end_range=52844,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E97_RS23595;partial=true;product=hypothetical protein;protein_id=WP_245304076.1;transl_table=11
##sequence-region NZ_PYKA01000012.1 1 51770
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000012.1	RefSeq	region	1	51770	.	+	.	ID=NZ_PYKA01000012.1:1..51770;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000012.1	RefSeq	gene	447	1247	.	+	.	ID=gene-C9E97_RS00400;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=C9E97_RS00400;old_locus_tag=C9E97_00410
NZ_PYKA01000012.1	Protein Homology	CDS	447	1247	.	+	0	ID=cds-WP_000210454.1;Parent=gene-C9E97_RS00400;Dbxref=GenBank:WP_000210454.1;Name=WP_000210454.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461875.1;locus_tag=C9E97_RS00400;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_000210454.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	1475	3112	.	+	.	ID=gene-C9E97_RS00405;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=C9E97_RS00405;old_locus_tag=C9E97_00415
NZ_PYKA01000012.1	Protein Homology	CDS	1475	3112	.	+	0	ID=cds-WP_000210863.1;Parent=gene-C9E97_RS00405;Dbxref=GenBank:WP_000210863.1;Name=WP_000210863.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=C9E97_RS00405;product=glutamine hydrolyzing CTP synthase;protein_id=WP_000210863.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	3195	4493	.	+	.	ID=gene-C9E97_RS00410;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=C9E97_RS00410;old_locus_tag=C9E97_00420
NZ_PYKA01000012.1	Protein Homology	CDS	3195	4493	.	+	0	ID=cds-WP_000036734.1;Parent=gene-C9E97_RS00410;Dbxref=GenBank:WP_000036734.1;Name=WP_000036734.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=C9E97_RS00410;product=phosphopyruvate hydratase;protein_id=WP_000036734.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	4629	5300	.	+	.	ID=gene-C9E97_RS00415;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=C9E97_RS00415;old_locus_tag=C9E97_00425
NZ_PYKA01000012.1	Protein Homology	CDS	4629	5300	.	+	0	ID=cds-WP_001199961.1;Parent=gene-C9E97_RS00415;Dbxref=GenBank:WP_001199961.1;Name=WP_001199961.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=C9E97_RS00415;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001199961.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	direct_repeat	5597	6235	.	+	.	ID=id-NZ_PYKA01000012.1:5597..6235;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=5597..5625;rpt_unit_seq=gtgttccccgcgccagcggggataaaccg
NZ_PYKA01000012.1	RefSeq	gene	6394	7191	.	+	.	ID=gene-C9E97_RS00420;Name=C9E97_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00420;old_locus_tag=C9E97_00430
NZ_PYKA01000012.1	Protein Homology	CDS	6394	7191	.	+	0	ID=cds-WP_135369069.1;Parent=gene-C9E97_RS00420;Dbxref=GenBank:WP_135369069.1;Name=WP_135369069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461871.1;locus_tag=C9E97_RS00420;product=MBL fold metallo-hydrolase;protein_id=WP_135369069.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	7278	7640	.	-	.	ID=gene-C9E97_RS00425;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=C9E97_RS00425;old_locus_tag=C9E97_00435
NZ_PYKA01000012.1	Protein Homology	CDS	7278	7640	.	-	0	ID=cds-WP_000108313.1;Parent=gene-C9E97_RS00425;Dbxref=GenBank:WP_000108313.1;Name=WP_000108313.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461870.1;locus_tag=C9E97_RS00425;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_000108313.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	8064	9863	.	+	.	ID=gene-C9E97_RS00435;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=C9E97_RS00435;old_locus_tag=C9E97_00445
NZ_PYKA01000012.1	Protein Homology	CDS	8064	9863	.	+	0	ID=cds-WP_077463812.1;Parent=gene-C9E97_RS00435;Dbxref=GenBank:WP_077463812.1;Name=WP_077463812.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461869.1;locus_tag=C9E97_RS00435;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_077463812.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	9863	11575	.	+	.	ID=gene-C9E97_RS00440;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=C9E97_RS00440;old_locus_tag=C9E97_00450
NZ_PYKA01000012.1	Protein Homology	CDS	9863	11575	.	+	0	ID=cds-WP_135369068.1;Parent=gene-C9E97_RS00440;Dbxref=GenBank:WP_135369068.1;Name=WP_135369068.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=C9E97_RS00440;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_135369068.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	11677	12411	.	+	.	ID=gene-C9E97_RS00445;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=C9E97_RS00445;old_locus_tag=C9E97_00455
NZ_PYKA01000012.1	Protein Homology	CDS	11677	12411	.	+	0	ID=cds-WP_023201015.1;Parent=gene-C9E97_RS00445;Dbxref=GenBank:WP_023201015.1;Name=WP_023201015.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461867.1;locus_tag=C9E97_RS00445;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_023201015.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	12624	13577	.	-	.	ID=gene-C9E97_RS00450;Name=sopD;gbkey=Gene;gene=sopD;gene_biotype=protein_coding;locus_tag=C9E97_RS00450;old_locus_tag=C9E97_00465
NZ_PYKA01000012.1	Protein Homology	CDS	12624	13577	.	-	0	ID=cds-WP_001145544.1;Parent=gene-C9E97_RS00450;Dbxref=GenBank:WP_001145544.1;Name=WP_001145544.1;gbkey=CDS;gene=sopD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441126.1;locus_tag=C9E97_RS00450;product=SPI-1 type III secretion system effector SopD;protein_id=WP_001145544.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	13961	16660	.	-	.	ID=gene-C9E97_RS00455;Name=cas3;gbkey=Gene;gene=cas3;gene_biotype=protein_coding;locus_tag=C9E97_RS00455;old_locus_tag=C9E97_00470
NZ_PYKA01000012.1	Protein Homology	CDS	13961	16660	.	-	0	ID=cds-WP_135369067.1;Parent=gene-C9E97_RS00455;Dbxref=GenBank:WP_135369067.1;Name=WP_135369067.1;Ontology_term=GO:0043571,GO:0004386;gbkey=CDS;gene=cas3;go_function=helicase activity|0004386||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000192071.1;locus_tag=C9E97_RS00455;product=CRISPR-associated helicase Cas3';protein_id=WP_135369067.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	17018	18553	.	+	.	ID=gene-C9E97_RS00460;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;gene_synonym=cse1;locus_tag=C9E97_RS00460;old_locus_tag=C9E97_00475
NZ_PYKA01000012.1	Protein Homology	CDS	17018	18553	.	+	0	ID=cds-WP_135369066.1;Parent=gene-C9E97_RS00460;Dbxref=GenBank:WP_135369066.1;Name=WP_135369066.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000366313.1;locus_tag=C9E97_RS00460;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WP_135369066.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	18570	19172	.	+	.	ID=gene-C9E97_RS00465;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;gene_synonym=cse2;locus_tag=C9E97_RS00465;old_locus_tag=C9E97_00480
NZ_PYKA01000012.1	Protein Homology	CDS	18570	19172	.	+	0	ID=cds-WP_023224615.1;Parent=gene-C9E97_RS00465;Dbxref=GenBank:WP_023224615.1;Name=WP_023224615.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casB;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000935106.1;locus_tag=C9E97_RS00465;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=WP_023224615.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	19195	20253	.	+	.	ID=gene-C9E97_RS00470;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=C9E97_RS00470;old_locus_tag=C9E97_00485
NZ_PYKA01000012.1	Protein Homology	CDS	19195	20253	.	+	0	ID=cds-WP_001537534.1;Parent=gene-C9E97_RS00470;Dbxref=GenBank:WP_001537534.1;Name=WP_001537534.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas7e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001804435.1;locus_tag=C9E97_RS00470;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=WP_001537534.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	20263	20988	.	+	.	ID=gene-C9E97_RS00475;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=C9E97_RS00475;old_locus_tag=C9E97_00490
NZ_PYKA01000012.1	Protein Homology	CDS	20263	20988	.	+	0	ID=cds-WP_135369065.1;Parent=gene-C9E97_RS00475;Dbxref=GenBank:WP_135369065.1;Name=WP_135369065.1;Ontology_term=GO:0043571,GO:0051607,GO:0003723;gbkey=CDS;gene=cas5e;go_function=RNA binding|0003723||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000666428.1;locus_tag=C9E97_RS00475;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=WP_135369065.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	20988	21692	.	+	.	ID=gene-C9E97_RS00480;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=C9E97_RS00480;old_locus_tag=C9E97_00495
NZ_PYKA01000012.1	Protein Homology	CDS	20988	21692	.	+	0	ID=cds-WP_001748704.1;Parent=gene-C9E97_RS00480;Dbxref=GenBank:WP_001748704.1;Name=WP_001748704.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas6e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748704.1;locus_tag=C9E97_RS00480;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WP_001748704.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	21692	22609	.	+	.	ID=gene-C9E97_RS00485;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=C9E97_RS00485;old_locus_tag=C9E97_00500
NZ_PYKA01000012.1	Protein Homology	CDS	21692	22609	.	+	0	ID=cds-WP_000118674.1;Parent=gene-C9E97_RS00485;Dbxref=GenBank:WP_000118674.1;Name=WP_000118674.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417235.1;locus_tag=C9E97_RS00485;product=type I-E CRISPR-associated endonuclease Cas1e;protein_id=WP_000118674.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	22612	22905	.	+	.	ID=gene-C9E97_RS00490;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=C9E97_RS00490;old_locus_tag=C9E97_00505
NZ_PYKA01000012.1	Protein Homology	CDS	22612	22905	.	+	0	ID=cds-WP_080201091.1;Parent=gene-C9E97_RS00490;Dbxref=GenBank:WP_080201091.1;Name=WP_080201091.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000062285.1;locus_tag=C9E97_RS00490;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=WP_080201091.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	direct_repeat	22990	23873	.	+	.	ID=id-NZ_PYKA01000012.1:22990..23873;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=22990..23018;rpt_unit_seq=gtgttccccgcgccagcggggataaaccg
NZ_PYKA01000012.1	RefSeq	gene	23888	24934	.	-	.	ID=gene-C9E97_RS00495;Name=C9E97_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00495;old_locus_tag=C9E97_00510
NZ_PYKA01000012.1	Protein Homology	CDS	23888	24934	.	-	0	ID=cds-WP_000490481.1;Parent=gene-C9E97_RS00495;Dbxref=GenBank:WP_000490481.1;Name=WP_000490481.1;Ontology_term=GO:0008235;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461857.1;locus_tag=C9E97_RS00495;product=aminopeptidase;protein_id=WP_000490481.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	25185	26093	.	+	.	ID=gene-C9E97_RS00500;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=C9E97_RS00500;old_locus_tag=C9E97_00515
NZ_PYKA01000012.1	Protein Homology	CDS	25185	26093	.	+	0	ID=cds-WP_000372384.1;Parent=gene-C9E97_RS00500;Dbxref=GenBank:WP_000372384.1;Name=WP_000372384.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=C9E97_RS00500;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_000372384.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	26103	27542	.	+	.	ID=gene-C9E97_RS00505;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=C9E97_RS00505;old_locus_tag=C9E97_00520
NZ_PYKA01000012.1	Protein Homology	CDS	26103	27542	.	+	0	ID=cds-WP_001092256.1;Parent=gene-C9E97_RS00505;Dbxref=GenBank:WP_001092256.1;Name=WP_001092256.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461855.1;locus_tag=C9E97_RS00505;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_001092256.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	27529	28134	.	+	.	ID=gene-C9E97_RS00510;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=C9E97_RS00510;old_locus_tag=C9E97_00525
NZ_PYKA01000012.1	Protein Homology	CDS	27529	28134	.	+	0	ID=cds-WP_001173663.1;Parent=gene-C9E97_RS00510;Dbxref=GenBank:WP_001173663.1;Name=WP_001173663.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461854.1;locus_tag=C9E97_RS00510;product=adenylyl-sulfate kinase;protein_id=WP_001173663.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	28185	28508	.	+	.	ID=gene-C9E97_RS00515;Name=C9E97_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00515;old_locus_tag=C9E97_00530
NZ_PYKA01000012.1	Protein Homology	CDS	28185	28508	.	+	0	ID=cds-WP_001537530.1;Parent=gene-C9E97_RS00515;Dbxref=GenBank:WP_001537530.1;Name=WP_001537530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246104.1;locus_tag=C9E97_RS00515;product=DUF3561 family protein;protein_id=WP_001537530.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	28699	29010	.	+	.	ID=gene-C9E97_RS00520;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=C9E97_RS00520;old_locus_tag=C9E97_00535
NZ_PYKA01000012.1	Protein Homology	CDS	28699	29010	.	+	0	ID=cds-WP_000517480.1;Parent=gene-C9E97_RS00520;Dbxref=GenBank:WP_000517480.1;Name=WP_000517480.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461852.1;locus_tag=C9E97_RS00520;product=cell division protein FtsB;protein_id=WP_000517480.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	29029	29739	.	+	.	ID=gene-C9E97_RS00525;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=C9E97_RS00525;old_locus_tag=C9E97_00540
NZ_PYKA01000012.1	Protein Homology	CDS	29029	29739	.	+	0	ID=cds-WP_000741641.1;Parent=gene-C9E97_RS00525;Dbxref=GenBank:WP_000741641.1;Name=WP_000741641.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461851.1;locus_tag=C9E97_RS00525;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_000741641.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	29739	30218	.	+	.	ID=gene-C9E97_RS00530;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=C9E97_RS00530;old_locus_tag=C9E97_00545
NZ_PYKA01000012.1	Protein Homology	CDS	29739	30218	.	+	0	ID=cds-WP_001219244.1;Parent=gene-C9E97_RS00530;Dbxref=GenBank:WP_001219244.1;Name=WP_001219244.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461850.1;locus_tag=C9E97_RS00530;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_001219244.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	30215	31264	.	+	.	ID=gene-C9E97_RS00535;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=C9E97_RS00535;old_locus_tag=C9E97_00550
NZ_PYKA01000012.1	Protein Homology	CDS	30215	31264	.	+	0	ID=cds-WP_000134246.1;Parent=gene-C9E97_RS00535;Dbxref=GenBank:WP_000134246.1;Name=WP_000134246.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461849.1;locus_tag=C9E97_RS00535;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_000134246.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	31245	32006	.	+	.	ID=gene-C9E97_RS00540;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=C9E97_RS00540;old_locus_tag=C9E97_00555
NZ_PYKA01000012.1	Protein Homology	CDS	31245	32006	.	+	0	ID=cds-WP_001221538.1;Parent=gene-C9E97_RS00540;Dbxref=GenBank:WP_001221538.1;Name=WP_001221538.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461848.1;locus_tag=C9E97_RS00540;product=5'/3'-nucleotidase SurE;protein_id=WP_001221538.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	32000	32626	.	+	.	ID=gene-C9E97_RS00545;Name=C9E97_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00545;old_locus_tag=C9E97_00560
NZ_PYKA01000012.1	Protein Homology	CDS	32000	32626	.	+	0	ID=cds-WP_000253545.1;Parent=gene-C9E97_RS00545;Dbxref=GenBank:WP_000253545.1;Name=WP_000253545.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=C9E97_RS00545;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_000253545.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	32765	32923	.	-	.	ID=gene-C9E97_RS23630;Name=C9E97_RS23630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23630
NZ_PYKA01000012.1	Protein Homology	CDS	32765	32923	.	-	0	ID=cds-WP_223148970.1;Parent=gene-C9E97_RS23630;Dbxref=GenBank:WP_223148970.1;Name=WP_223148970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541719.1;locus_tag=C9E97_RS23630;product=peptidase;protein_id=WP_223148970.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	32853	33935	.	+	.	ID=gene-C9E97_RS00550;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=C9E97_RS00550;old_locus_tag=C9E97_00565
NZ_PYKA01000012.1	Protein Homology	CDS	32853	33935	.	+	0	ID=cds-WP_223149274.1;Parent=gene-C9E97_RS00550;Dbxref=GenBank:WP_223149274.1;Name=WP_223149274.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461846.1;locus_tag=C9E97_RS00550;product=murein hydrolase activator NlpD;protein_id=WP_223149274.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	33998	34990	.	+	.	ID=gene-C9E97_RS00555;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=C9E97_RS00555;old_locus_tag=C9E97_00570
NZ_PYKA01000012.1	Protein Homology	CDS	33998	34990	.	+	0	ID=cds-WP_000081498.1;Parent=gene-C9E97_RS00555;Dbxref=GenBank:WP_000081498.1;Name=WP_000081498.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=C9E97_RS00555;product=RNA polymerase sigma factor RpoS;protein_id=WP_000081498.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	35035	35271	.	-	.	ID=gene-C9E97_RS00560;Name=C9E97_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00560;old_locus_tag=C9E97_00575
NZ_PYKA01000012.1	Protein Homology	CDS	35035	35271	.	-	0	ID=cds-WP_000562964.1;Parent=gene-C9E97_RS00560;Dbxref=GenBank:WP_000562964.1;Name=WP_000562964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461844.1;locus_tag=C9E97_RS00560;product=non-oxidative hydroxyarylic acid decarboxylases subunit D;protein_id=WP_000562964.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	35282	36709	.	-	.	ID=gene-C9E97_RS00565;Name=C9E97_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00565;old_locus_tag=C9E97_00580
NZ_PYKA01000012.1	Protein Homology	CDS	35282	36709	.	-	0	ID=cds-WP_000863168.1;Parent=gene-C9E97_RS00565;Dbxref=GenBank:WP_000863168.1;Name=WP_000863168.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461843.1;locus_tag=C9E97_RS00565;product=non-oxidative hydroxyarylic acid decarboxylases subunit C;protein_id=WP_000863168.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	36709	37302	.	-	.	ID=gene-C9E97_RS00570;Name=C9E97_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00570;old_locus_tag=C9E97_00585
NZ_PYKA01000012.1	Protein Homology	CDS	36709	37302	.	-	0	ID=cds-WP_001237180.1;Parent=gene-C9E97_RS00570;Dbxref=GenBank:WP_001237180.1;Name=WP_001237180.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461842.1;locus_tag=C9E97_RS00570;product=non-oxidative hydroxyarylic acid decarboxylases subunit B;protein_id=WP_001237180.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	37473	37877	.	+	.	ID=gene-C9E97_RS00575;Name=C9E97_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00575;old_locus_tag=C9E97_00590
NZ_PYKA01000012.1	Protein Homology	CDS	37473	37877	.	+	0	ID=cds-WP_000423338.1;Parent=gene-C9E97_RS00575;Dbxref=GenBank:WP_000423338.1;Name=WP_000423338.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461841.1;locus_tag=C9E97_RS00575;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_000423338.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	37896	38660	.	-	.	ID=gene-C9E97_RS00580;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=C9E97_RS00580;old_locus_tag=C9E97_00595
NZ_PYKA01000012.1	Protein Homology	CDS	37896	38660	.	-	0	ID=cds-WP_000613184.1;Parent=gene-C9E97_RS00580;Dbxref=GenBank:WP_000613184.1;Name=WP_000613184.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461840.1;locus_tag=C9E97_RS00580;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_000613184.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	38857	39780	.	+	.	ID=gene-C9E97_RS00585;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=C9E97_RS00585;old_locus_tag=C9E97_00600
NZ_PYKA01000012.1	Protein Homology	CDS	38857	39780	.	+	0	ID=cds-WP_000206958.1;Parent=gene-C9E97_RS00585;Dbxref=GenBank:WP_000206958.1;Name=WP_000206958.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461839.1;locus_tag=C9E97_RS00585;product=L-threonate dehydrogenase;protein_id=WP_000206958.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	39774	41036	.	+	.	ID=gene-C9E97_RS00590;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=C9E97_RS00590;old_locus_tag=C9E97_00605
NZ_PYKA01000012.1	Protein Homology	CDS	39774	41036	.	+	0	ID=cds-WP_000912492.1;Parent=gene-C9E97_RS00590;Dbxref=GenBank:WP_000912492.1;Name=WP_000912492.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461838.1;locus_tag=C9E97_RS00590;product=3-oxo-tetronate kinase;protein_id=WP_000912492.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	41033	41671	.	+	.	ID=gene-C9E97_RS00595;Name=C9E97_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00595;old_locus_tag=C9E97_00610
NZ_PYKA01000012.1	Protein Homology	CDS	41033	41671	.	+	0	ID=cds-WP_000153636.1;Parent=gene-C9E97_RS00595;Dbxref=GenBank:WP_000153636.1;Name=WP_000153636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461837.1;locus_tag=C9E97_RS00595;product=aldolase;protein_id=WP_000153636.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	41676	42452	.	+	.	ID=gene-C9E97_RS00600;Name=C9E97_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00600;old_locus_tag=C9E97_00615
NZ_PYKA01000012.1	Protein Homology	CDS	41676	42452	.	+	0	ID=cds-WP_001136891.1;Parent=gene-C9E97_RS00600;Dbxref=GenBank:WP_001136891.1;Name=WP_001136891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461836.1;locus_tag=C9E97_RS00600;product=HPr family phosphocarrier protein;protein_id=WP_001136891.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	42492	43442	.	+	.	ID=gene-C9E97_RS00605;Name=denD;gbkey=Gene;gene=denD;gene_biotype=protein_coding;locus_tag=C9E97_RS00605;old_locus_tag=C9E97_00620
NZ_PYKA01000012.1	Protein Homology	CDS	42492	43442	.	+	0	ID=cds-WP_001165731.1;Parent=gene-C9E97_RS00605;Dbxref=GenBank:WP_001165731.1;Name=WP_001165731.1;Ontology_term=GO:0005975,GO:0016491;gbkey=CDS;gene=denD;go_function=oxidoreductase activity|0016491||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461835.1;locus_tag=C9E97_RS00605;product=D-erythronate dehydrogenase;protein_id=WP_001165731.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	43439	44935	.	+	.	ID=gene-C9E97_RS00610;Name=C9E97_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00610;old_locus_tag=C9E97_00625
NZ_PYKA01000012.1	Protein Homology	CDS	43439	44935	.	+	0	ID=cds-WP_000202725.1;Parent=gene-C9E97_RS00610;Dbxref=GenBank:WP_000202725.1;Name=WP_000202725.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461834.1;locus_tag=C9E97_RS00610;product=GntP family permease;protein_id=WP_000202725.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	44977	45909	.	-	.	ID=gene-C9E97_RS00615;Name=C9E97_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00615;old_locus_tag=C9E97_00630
NZ_PYKA01000012.1	Protein Homology	CDS	44977	45909	.	-	0	ID=cds-WP_135369064.1;Parent=gene-C9E97_RS00615;Dbxref=GenBank:WP_135369064.1;Name=WP_135369064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461833.1;locus_tag=C9E97_RS00615;product=LysR family transcriptional regulator;protein_id=WP_135369064.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	45997	47205	.	+	.	ID=gene-C9E97_RS00620;Name=C9E97_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00620;old_locus_tag=C9E97_00635
NZ_PYKA01000012.1	Protein Homology	CDS	45997	47205	.	+	0	ID=cds-WP_135369063.1;Parent=gene-C9E97_RS00620;Dbxref=GenBank:WP_135369063.1;Name=WP_135369063.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461832.1;locus_tag=C9E97_RS00620;product=MFS transporter;protein_id=WP_135369063.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	47202	47582	.	+	.	ID=gene-C9E97_RS00625;Name=C9E97_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00625;old_locus_tag=C9E97_00640
NZ_PYKA01000012.1	Protein Homology	CDS	47202	47582	.	+	0	ID=cds-WP_001070479.1;Parent=gene-C9E97_RS00625;Dbxref=GenBank:WP_001070479.1;Name=WP_001070479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=C9E97_RS00625;product=DUF4440 domain-containing protein;protein_id=WP_001070479.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	47638	50205	.	-	.	ID=gene-C9E97_RS00630;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=C9E97_RS00630;old_locus_tag=C9E97_00645
NZ_PYKA01000012.1	Protein Homology	CDS	47638	50205	.	-	0	ID=cds-WP_001005807.1;Parent=gene-C9E97_RS00630;Dbxref=GenBank:WP_001005807.1;Name=WP_001005807.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461830.1;locus_tag=C9E97_RS00630;product=DNA mismatch repair protein MutS;protein_id=WP_001005807.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	50363	50884	.	+	.	ID=gene-C9E97_RS00635;Name=C9E97_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00635;old_locus_tag=C9E97_00650
NZ_PYKA01000012.1	Protein Homology	CDS	50363	50884	.	+	0	ID=cds-WP_135369062.1;Parent=gene-C9E97_RS00635;Dbxref=GenBank:WP_135369062.1;Name=WP_135369062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=C9E97_RS00635;product=cytoplasmic protein;protein_id=WP_135369062.1;transl_table=11
NZ_PYKA01000012.1	RefSeq	gene	51056	51712	.	-	.	ID=gene-C9E97_RS00640;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=C9E97_RS00640;old_locus_tag=C9E97_00655
NZ_PYKA01000012.1	Protein Homology	CDS	51056	51712	.	-	0	ID=cds-WP_000420451.1;Parent=gene-C9E97_RS00640;Dbxref=GenBank:WP_000420451.1;Name=WP_000420451.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461828.1;locus_tag=C9E97_RS00640;product=protein-serine/threonine phosphatase;protein_id=WP_000420451.1;transl_table=11
##sequence-region NZ_PYKA01000105.1 1 51655
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000105.1	RefSeq	region	1	51655	.	+	.	ID=NZ_PYKA01000105.1:1..51655;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000105.1	RefSeq	gene	65	544	.	-	.	ID=gene-C9E97_RS14225;Name=cigR;gbkey=Gene;gene=cigR;gene_biotype=protein_coding;locus_tag=C9E97_RS14225;old_locus_tag=C9E97_14530
NZ_PYKA01000105.1	Protein Homology	CDS	65	544	.	-	0	ID=cds-WP_001065328.1;Parent=gene-C9E97_RS14225;Dbxref=GenBank:WP_001065328.1;Name=WP_001065328.1;gbkey=CDS;gene=cigR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462661.1;locus_tag=C9E97_RS14225;product=anti-virulence regulatory inner membrane protein CigR;protein_id=WP_001065328.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	646	732	.	-	.	ID=gene-C9E97_RS23945;Name=mgtU;gbkey=Gene;gene=mgtU;gene_biotype=protein_coding;locus_tag=C9E97_RS23945
NZ_PYKA01000105.1	Protein Homology	CDS	646	732	.	-	0	ID=cds-WP_252515021.1;Parent=gene-C9E97_RS23945;Dbxref=GenBank:WP_252515021.1;Name=WP_252515021.1;gbkey=CDS;gene=mgtU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_251009859.1;locus_tag=C9E97_RS23945;product=magnesium transporter protection protein MgtU;protein_id=WP_252515021.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	745	837	.	-	.	ID=gene-C9E97_RS14230;Name=mgtR;gbkey=Gene;gene=mgtR;gene_biotype=protein_coding;locus_tag=C9E97_RS14230;old_locus_tag=C9E97_14535
NZ_PYKA01000105.1	Protein Homology	CDS	745	837	.	-	0	ID=cds-WP_001082117.1;Parent=gene-C9E97_RS14230;Dbxref=GenBank:WP_001082117.1;Name=WP_001082117.1;gbkey=CDS;gene=mgtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082117.1;locus_tag=C9E97_RS14230;product=protein MgtR;protein_id=WP_001082117.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	859	3585	.	-	.	ID=gene-C9E97_RS14235;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=C9E97_RS14235;old_locus_tag=C9E97_14540
NZ_PYKA01000105.1	Protein Homology	CDS	859	3585	.	-	0	ID=cds-WP_000131299.1;Parent=gene-C9E97_RS14235;Dbxref=GenBank:WP_000131299.1;Name=WP_000131299.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462662.1;locus_tag=C9E97_RS14235;product=magnesium-translocating P-type ATPase;protein_id=WP_000131299.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	3804	4499	.	-	.	ID=gene-C9E97_RS14240;Name=C9E97_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14240;old_locus_tag=C9E97_14545
NZ_PYKA01000105.1	Protein Homology	CDS	3804	4499	.	-	0	ID=cds-WP_000392697.1;Parent=gene-C9E97_RS14240;Dbxref=GenBank:WP_000392697.1;Name=WP_000392697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462663.1;locus_tag=C9E97_RS14240;product=MgtC family protein;protein_id=WP_000392697.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	5005	5907	.	+	.	ID=gene-C9E97_RS14245;Name=C9E97_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14245;old_locus_tag=C9E97_14550
NZ_PYKA01000105.1	Protein Homology	CDS	5005	5907	.	+	0	ID=cds-WP_000535970.1;Parent=gene-C9E97_RS14245;Dbxref=GenBank:WP_000535970.1;Name=WP_000535970.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462664.1;locus_tag=C9E97_RS14245;product=EamA family transporter;protein_id=WP_000535970.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	5950	6879	.	-	.	ID=gene-C9E97_RS14250;Name=C9E97_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14250;old_locus_tag=C9E97_14555
NZ_PYKA01000105.1	Protein Homology	CDS	5950	6879	.	-	0	ID=cds-WP_000749536.1;Parent=gene-C9E97_RS14250;Dbxref=GenBank:WP_000749536.1;Name=WP_000749536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462665.1;locus_tag=C9E97_RS14250;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000749536.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	7115	7858	.	-	.	ID=gene-C9E97_RS14255;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=C9E97_RS14255;old_locus_tag=C9E97_14560
NZ_PYKA01000105.1	Protein Homology	CDS	7115	7858	.	-	0	ID=cds-WP_001186147.1;Parent=gene-C9E97_RS14255;Dbxref=GenBank:WP_001186147.1;Name=WP_001186147.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462666.1;locus_tag=C9E97_RS14255;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_001186147.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	7845	8954	.	-	.	ID=gene-C9E97_RS14260;Name=dgaE;gbkey=Gene;gene=dgaE;gene_biotype=protein_coding;locus_tag=C9E97_RS14260;old_locus_tag=C9E97_14565
NZ_PYKA01000105.1	Protein Homology	CDS	7845	8954	.	-	0	ID=cds-WP_000188468.1;Parent=gene-C9E97_RS14260;Dbxref=GenBank:WP_000188468.1;Name=WP_000188468.1;Ontology_term=GO:0016829;gbkey=CDS;gene=dgaE;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462667.1;locus_tag=C9E97_RS14260;product=D-glucosaminate-6-phosphate ammonia lyase;protein_id=WP_000188468.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	8958	9818	.	-	.	ID=gene-C9E97_RS14265;Name=C9E97_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14265;old_locus_tag=C9E97_14570
NZ_PYKA01000105.1	Protein Homology	CDS	8958	9818	.	-	0	ID=cds-WP_001526325.1;Parent=gene-C9E97_RS14265;Dbxref=GenBank:WP_001526325.1;Name=WP_001526325.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462668.3;locus_tag=C9E97_RS14265;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_001526325.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	9815	10564	.	-	.	ID=gene-C9E97_RS14270;Name=C9E97_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14270;old_locus_tag=C9E97_14575
NZ_PYKA01000105.1	Protein Homology	CDS	9815	10564	.	-	0	ID=cds-WP_000380259.1;Parent=gene-C9E97_RS14270;Dbxref=GenBank:WP_000380259.1;Name=WP_000380259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462669.1;locus_tag=C9E97_RS14270;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000380259.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	10710	11195	.	-	.	ID=gene-C9E97_RS14275;Name=C9E97_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14275;old_locus_tag=C9E97_14580
NZ_PYKA01000105.1	Protein Homology	CDS	10710	11195	.	-	0	ID=cds-WP_001284295.1;Parent=gene-C9E97_RS14275;Dbxref=GenBank:WP_001284295.1;Name=WP_001284295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462670.1;locus_tag=C9E97_RS14275;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WP_001284295.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	11206	11631	.	-	.	ID=gene-C9E97_RS14280;Name=C9E97_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14280;old_locus_tag=C9E97_14585
NZ_PYKA01000105.1	Protein Homology	CDS	11206	11631	.	-	0	ID=cds-WP_000214106.1;Parent=gene-C9E97_RS14280;Dbxref=GenBank:WP_000214106.1;Name=WP_000214106.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462671.1;locus_tag=C9E97_RS14280;product=PTS sugar transporter subunit IIA;protein_id=WP_000214106.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	11850	14648	.	-	.	ID=gene-C9E97_RS14285;Name=dagR;gbkey=Gene;gene=dagR;gene_biotype=protein_coding;locus_tag=C9E97_RS14285;old_locus_tag=C9E97_14595
NZ_PYKA01000105.1	Protein Homology	CDS	11850	14648	.	-	0	ID=cds-WP_001252672.1;Parent=gene-C9E97_RS14285;Dbxref=GenBank:WP_001252672.1;Name=WP_001252672.1;Ontology_term=GO:0006355,GO:0009401,GO:0005524,GO:0016887;gbkey=CDS;gene=dagR;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=C9E97_RS14285;product=transcriptional regulator DagR;protein_id=WP_001252672.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	14845	15138	.	+	.	ID=gene-C9E97_RS14290;Name=C9E97_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14290;old_locus_tag=C9E97_14600
NZ_PYKA01000105.1	Protein Homology	CDS	14845	15138	.	+	0	ID=cds-WP_135369758.1;Parent=gene-C9E97_RS14290;Dbxref=GenBank:WP_135369758.1;Name=WP_135369758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462673.1;locus_tag=C9E97_RS14290;product=YicS family protein;protein_id=WP_135369758.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	15245	16627	.	+	.	ID=gene-C9E97_RS14295;Name=C9E97_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14295;old_locus_tag=C9E97_14605
NZ_PYKA01000105.1	Protein Homology	CDS	15245	16627	.	+	0	ID=cds-WP_135369757.1;Parent=gene-C9E97_RS14295;Dbxref=GenBank:WP_135369757.1;Name=WP_135369757.1;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462674.1;locus_tag=C9E97_RS14295;product=glycoside hydrolase family 1 protein;protein_id=WP_135369757.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	16687	17880	.	-	.	ID=gene-C9E97_RS14300;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=C9E97_RS14300;old_locus_tag=C9E97_14610
NZ_PYKA01000105.1	Protein Homology	CDS	16687	17880	.	-	0	ID=cds-WP_001004796.1;Parent=gene-C9E97_RS14300;Dbxref=GenBank:WP_001004796.1;Name=WP_001004796.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462675.1;locus_tag=C9E97_RS14300;product=purine ribonucleoside efflux pump NepI;protein_id=WP_001004796.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	18096	18455	.	+	.	ID=gene-C9E97_RS14305;Name=C9E97_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14305;old_locus_tag=C9E97_14615
NZ_PYKA01000105.1	Protein Homology	CDS	18096	18455	.	+	0	ID=cds-WP_001217956.1;Parent=gene-C9E97_RS14305;Dbxref=GenBank:WP_001217956.1;Name=WP_001217956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462676.1;locus_tag=C9E97_RS14305;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001217956.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	18439	18762	.	+	.	ID=gene-C9E97_RS14310;Name=C9E97_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14310;old_locus_tag=C9E97_14620
NZ_PYKA01000105.1	Protein Homology	CDS	18439	18762	.	+	0	ID=cds-WP_001274841.1;Parent=gene-C9E97_RS14310;Dbxref=GenBank:WP_001274841.1;Name=WP_001274841.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462677.1;locus_tag=C9E97_RS14310;product=helix-turn-helix domain-containing protein;protein_id=WP_001274841.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	18853	19122	.	-	.	ID=gene-C9E97_RS14315;Name=C9E97_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14315;old_locus_tag=C9E97_14625
NZ_PYKA01000105.1	Protein Homology	CDS	18853	19122	.	-	0	ID=cds-WP_135369756.1;Parent=gene-C9E97_RS14315;Dbxref=GenBank:WP_135369756.1;Name=WP_135369756.1;Ontology_term=GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462678.1;locus_tag=C9E97_RS14315;product=HPr family phosphocarrier protein;protein_id=WP_135369756.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	19132	19992	.	-	.	ID=gene-C9E97_RS14320;Name=C9E97_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14320;old_locus_tag=C9E97_14630
NZ_PYKA01000105.1	Protein Homology	CDS	19132	19992	.	-	0	ID=cds-WP_001131802.1;Parent=gene-C9E97_RS14320;Dbxref=GenBank:WP_001131802.1;Name=WP_001131802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462679.1;locus_tag=C9E97_RS14320;product=class II aldolase;protein_id=WP_001131802.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	20055	21539	.	-	.	ID=gene-C9E97_RS14325;Name=C9E97_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14325;old_locus_tag=C9E97_14635
NZ_PYKA01000105.1	Protein Homology	CDS	20055	21539	.	-	0	ID=cds-WP_135369755.1;Parent=gene-C9E97_RS14325;Dbxref=GenBank:WP_135369755.1;Name=WP_135369755.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462680.1;locus_tag=C9E97_RS14325;product=FGGY-family carbohydrate kinase;protein_id=WP_135369755.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	21532	22890	.	-	.	ID=gene-C9E97_RS14330;Name=C9E97_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14330;old_locus_tag=C9E97_14640
NZ_PYKA01000105.1	Protein Homology	CDS	21532	22890	.	-	0	ID=cds-WP_000997824.1;Parent=gene-C9E97_RS14330;Dbxref=GenBank:WP_000997824.1;Name=WP_000997824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462681.1;locus_tag=C9E97_RS14330;product=PTS galactitol transporter subunit IIC;protein_id=WP_000997824.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	22966	23253	.	-	.	ID=gene-C9E97_RS14335;Name=C9E97_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14335;old_locus_tag=C9E97_14645
NZ_PYKA01000105.1	Protein Homology	CDS	22966	23253	.	-	0	ID=cds-WP_000041396.1;Parent=gene-C9E97_RS14335;Dbxref=GenBank:WP_000041396.1;Name=WP_000041396.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462682.1;locus_tag=C9E97_RS14335;product=PTS sugar transporter subunit IIB;protein_id=WP_000041396.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	23250	23723	.	-	.	ID=gene-C9E97_RS14340;Name=C9E97_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14340;old_locus_tag=C9E97_14650
NZ_PYKA01000105.1	Protein Homology	CDS	23250	23723	.	-	0	ID=cds-WP_001152234.1;Parent=gene-C9E97_RS14340;Dbxref=GenBank:WP_001152234.1;Name=WP_001152234.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462683.1;locus_tag=C9E97_RS14340;product=PTS sugar transporter subunit IIA;protein_id=WP_001152234.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	23741	24484	.	-	.	ID=gene-C9E97_RS14345;Name=C9E97_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14345;old_locus_tag=C9E97_14655
NZ_PYKA01000105.1	Protein Homology	CDS	23741	24484	.	-	0	ID=cds-WP_135369754.1;Parent=gene-C9E97_RS14345;Dbxref=GenBank:WP_135369754.1;Name=WP_135369754.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462684.1;locus_tag=C9E97_RS14345;product=GntR family transcriptional regulator;protein_id=WP_135369754.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	24837	25289	.	-	.	ID=gene-C9E97_RS14350;Name=C9E97_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14350;old_locus_tag=C9E97_14660
NZ_PYKA01000105.1	Protein Homology	CDS	24837	25289	.	-	0	ID=cds-WP_001519640.1;Parent=gene-C9E97_RS14350;Dbxref=GenBank:WP_001519640.1;Name=WP_001519640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462685.1;locus_tag=C9E97_RS14350;product=DUF1198 domain-containing protein;protein_id=WP_001519640.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	25482	26873	.	-	.	ID=gene-C9E97_RS14355;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=C9E97_RS14355;old_locus_tag=C9E97_14665
NZ_PYKA01000105.1	Protein Homology	CDS	25482	26873	.	-	0	ID=cds-WP_000879181.1;Parent=gene-C9E97_RS14355;Dbxref=GenBank:WP_000879181.1;Name=WP_000879181.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462686.1;locus_tag=C9E97_RS14355;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_000879181.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	27016	28344	.	-	.	ID=gene-C9E97_RS14360;Name=C9E97_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14360;old_locus_tag=C9E97_14670
NZ_PYKA01000105.1	Protein Homology	CDS	27016	28344	.	-	0	ID=cds-WP_000948164.1;Parent=gene-C9E97_RS14360;Dbxref=GenBank:WP_000948164.1;Name=WP_000948164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462687.1;locus_tag=C9E97_RS14360;product=MFS transporter;protein_id=WP_000948164.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	28354	29856	.	-	.	ID=gene-C9E97_RS14365;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=C9E97_RS14365;old_locus_tag=C9E97_14675
NZ_PYKA01000105.1	Protein Homology	CDS	28354	29856	.	-	0	ID=cds-WP_001091257.1;Parent=gene-C9E97_RS14365;Dbxref=GenBank:WP_001091257.1;Name=WP_001091257.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462688.1;locus_tag=C9E97_RS14365;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_001091257.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	29856	30446	.	-	.	ID=gene-C9E97_RS14370;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=C9E97_RS14370;old_locus_tag=C9E97_14680
NZ_PYKA01000105.1	Protein Homology	CDS	29856	30446	.	-	0	ID=cds-WP_000633672.1;Parent=gene-C9E97_RS14370;Dbxref=GenBank:WP_000633672.1;Name=WP_000633672.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462689.1;locus_tag=C9E97_RS14370;product=transcriptional regulator UhpA;protein_id=WP_000633672.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	30521	31534	.	-	.	ID=gene-C9E97_RS14375;Name=C9E97_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14375;old_locus_tag=C9E97_14685
NZ_PYKA01000105.1	Protein Homology	CDS	30521	31534	.	-	0	ID=cds-WP_020838459.1;Parent=gene-C9E97_RS14375;Dbxref=GenBank:WP_020838459.1;Name=WP_020838459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462690.1;locus_tag=C9E97_RS14375;product=aldose 1-epimerase family protein;protein_id=WP_020838459.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	31546	32862	.	-	.	ID=gene-C9E97_RS14380;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=C9E97_RS14380;old_locus_tag=C9E97_14690
NZ_PYKA01000105.1	Protein Homology	CDS	31546	32862	.	-	0	ID=cds-WP_000998358.1;Parent=gene-C9E97_RS14380;Dbxref=GenBank:WP_000998358.1;Name=WP_000998358.1;Ontology_term=GO:0015756,GO:0015150,GO:0015535;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA,fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462691.1;locus_tag=C9E97_RS14380;product=L-fucose:H+ symporter permease;protein_id=WP_000998358.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	32893	33813	.	-	.	ID=gene-C9E97_RS14385;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=C9E97_RS14385;old_locus_tag=C9E97_14695
NZ_PYKA01000105.1	Protein Homology	CDS	32893	33813	.	-	0	ID=cds-WP_000350272.1;Parent=gene-C9E97_RS14385;Dbxref=GenBank:WP_000350272.1;Name=WP_000350272.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462692.1;locus_tag=C9E97_RS14385;product=ribokinase;protein_id=WP_000350272.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	34138	34923	.	+	.	ID=gene-C9E97_RS14390;Name=C9E97_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14390;old_locus_tag=C9E97_14700
NZ_PYKA01000105.1	Protein Homology	CDS	34138	34923	.	+	0	ID=cds-WP_000448638.1;Parent=gene-C9E97_RS14390;Dbxref=GenBank:WP_000448638.1;Name=WP_000448638.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462693.1;locus_tag=C9E97_RS14390;product=DeoR family transcriptional regulator;protein_id=WP_000448638.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	34925	35215	.	-	.	ID=gene-C9E97_RS14395;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=C9E97_RS14395;old_locus_tag=C9E97_14705
NZ_PYKA01000105.1	Protein Homology	CDS	34925	35215	.	-	0	ID=cds-WP_001171826.1;Parent=gene-C9E97_RS14395;Dbxref=GenBank:WP_001171826.1;Name=WP_001171826.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462694.1;locus_tag=C9E97_RS14395;product=acetolactate synthase small subunit;protein_id=WP_001171826.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	35219	36907	.	-	.	ID=gene-C9E97_RS14400;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=C9E97_RS14400;old_locus_tag=C9E97_14710
NZ_PYKA01000105.1	Protein Homology	CDS	35219	36907	.	-	0	ID=cds-WP_000168439.1;Parent=gene-C9E97_RS14400;Dbxref=GenBank:WP_000168439.1;Name=WP_000168439.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=C9E97_RS14400;product=acetolactate synthase large subunit;protein_id=WP_000168439.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	37014	37112	.	-	.	ID=gene-C9E97_RS14405;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=C9E97_RS14405;old_locus_tag=C9E97_14715
NZ_PYKA01000105.1	Protein Homology	CDS	37014	37112	.	-	0	ID=cds-WP_001541152.1;Parent=gene-C9E97_RS14405;Dbxref=GenBank:WP_001541152.1;Name=WP_001541152.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462696.1;locus_tag=C9E97_RS14405;product=ilvB operon leader peptide IvbL;protein_id=WP_001541152.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	pseudogene	37635	37749	.	+	.	ID=gene-C9E97_RS14410;Name=C9E97_RS14410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS14410;old_locus_tag=C9E97_14720;pseudo=true
NZ_PYKA01000105.1	Protein Homology	CDS	37635	37749	.	+	0	ID=cds-C9E97_RS14410;Parent=gene-C9E97_RS14410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009325922.1;locus_tag=C9E97_RS14410;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	37746	37835	.	+	.	ID=gene-C9E97_RS14415;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=C9E97_RS14415;old_locus_tag=C9E97_14725
NZ_PYKA01000105.1	Protein Homology	CDS	37746	37835	.	+	0	ID=cds-WP_000117642.1;Parent=gene-C9E97_RS14415;Dbxref=GenBank:WP_000117642.1;Name=WP_000117642.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453107.1;locus_tag=C9E97_RS14415;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_000117642.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	37928	38788	.	+	.	ID=gene-C9E97_RS14420;Name=C9E97_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14420;old_locus_tag=C9E97_14730
NZ_PYKA01000105.1	Protein Homology	CDS	37928	38788	.	+	0	ID=cds-WP_001531658.1;Parent=gene-C9E97_RS14420;Dbxref=GenBank:WP_001531658.1;Name=WP_001531658.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462698.3;locus_tag=C9E97_RS14420;product=DMT family transporter;protein_id=WP_001531658.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	38991	40175	.	+	.	ID=gene-C9E97_RS14425;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=C9E97_RS14425;old_locus_tag=C9E97_14735
NZ_PYKA01000105.1	Protein Homology	CDS	38991	40175	.	+	0	ID=cds-WP_000828744.1;Parent=gene-C9E97_RS14425;Dbxref=GenBank:WP_000828744.1;Name=WP_000828744.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462699.1;locus_tag=C9E97_RS14425;product=multidrug efflux MFS transporter EmrD;protein_id=WP_000828744.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	40102	41187	.	-	.	ID=gene-C9E97_RS14430;Name=C9E97_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14430;old_locus_tag=C9E97_14740
NZ_PYKA01000105.1	Protein Homology	CDS	40102	41187	.	-	0	ID=cds-WP_000238928.1;Parent=gene-C9E97_RS14430;Dbxref=GenBank:WP_000238928.1;Name=WP_000238928.1;Ontology_term=GO:0000272,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462700.1;locus_tag=C9E97_RS14430;product=cellulase family glycosylhydrolase;protein_id=WP_000238928.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	41251	42174	.	-	.	ID=gene-C9E97_RS14435;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=C9E97_RS14435;old_locus_tag=C9E97_14745
NZ_PYKA01000105.1	Protein Homology	CDS	41251	42174	.	-	0	ID=cds-WP_061375735.1;Parent=gene-C9E97_RS14435;Dbxref=GenBank:WP_061375735.1;Name=WP_061375735.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462701.1;locus_tag=C9E97_RS14435;product=DNA-binding transcriptional regulator DsdC;protein_id=WP_061375735.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	42400	43737	.	+	.	ID=gene-C9E97_RS14440;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=C9E97_RS14440;old_locus_tag=C9E97_14750
NZ_PYKA01000105.1	Protein Homology	CDS	42400	43737	.	+	0	ID=cds-WP_135369753.1;Parent=gene-C9E97_RS14440;Dbxref=GenBank:WP_135369753.1;Name=WP_135369753.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462702.1;locus_tag=C9E97_RS14440;product=D-serine transporter DsdX;protein_id=WP_135369753.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	43755	45077	.	+	.	ID=gene-C9E97_RS14445;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=C9E97_RS14445;old_locus_tag=C9E97_14755
NZ_PYKA01000105.1	Protein Homology	CDS	43755	45077	.	+	0	ID=cds-WP_020837877.1;Parent=gene-C9E97_RS14445;Dbxref=GenBank:WP_020837877.1;Name=WP_020837877.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;gene=dsdA;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462703.1;locus_tag=C9E97_RS14445;product=D-serine ammonia-lyase;protein_id=WP_020837877.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	45159	45689	.	-	.	ID=gene-C9E97_RS14450;Name=C9E97_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14450;old_locus_tag=C9E97_14760
NZ_PYKA01000105.1	Protein Homology	CDS	45159	45689	.	-	0	ID=cds-WP_000147833.1;Parent=gene-C9E97_RS14450;Dbxref=GenBank:WP_000147833.1;Name=WP_000147833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462704.1;locus_tag=C9E97_RS14450;product=radical SAM protein;protein_id=WP_000147833.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	45686	46048	.	-	.	ID=gene-C9E97_RS14455;Name=C9E97_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14455;old_locus_tag=C9E97_14765
NZ_PYKA01000105.1	Protein Homology	CDS	45686	46048	.	-	0	ID=cds-WP_001113454.1;Parent=gene-C9E97_RS14455;Dbxref=GenBank:WP_001113454.1;Name=WP_001113454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462705.1;locus_tag=C9E97_RS14455;product=DUF202 domain-containing protein;protein_id=WP_001113454.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	46038	46385	.	-	.	ID=gene-C9E97_RS14460;Name=C9E97_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14460;old_locus_tag=C9E97_14770
NZ_PYKA01000105.1	Protein Homology	CDS	46038	46385	.	-	0	ID=cds-WP_000703964.1;Parent=gene-C9E97_RS14460;Dbxref=GenBank:WP_000703964.1;Name=WP_000703964.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462706.1;locus_tag=C9E97_RS14460;product=YidH family protein;protein_id=WP_000703964.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	46829	48490	.	-	.	ID=gene-C9E97_RS14465;Name=C9E97_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14465;old_locus_tag=C9E97_14775
NZ_PYKA01000105.1	Protein Homology	CDS	46829	48490	.	-	0	ID=cds-WP_001279793.1;Parent=gene-C9E97_RS14465;Dbxref=GenBank:WP_001279793.1;Name=WP_001279793.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462707.1;locus_tag=C9E97_RS14465;product=putative transporter;protein_id=WP_001279793.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	48679	49107	.	-	.	ID=gene-C9E97_RS14470;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=C9E97_RS14470;old_locus_tag=C9E97_14780
NZ_PYKA01000105.1	Protein Homology	CDS	48679	49107	.	-	0	ID=cds-WP_001246919.1;Parent=gene-C9E97_RS14470;Dbxref=GenBank:WP_001246919.1;Name=WP_001246919.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpB;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462708.3;locus_tag=C9E97_RS14470;product=small heat shock chaperone IbpB;protein_id=WP_001246919.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	49217	49630	.	-	.	ID=gene-C9E97_RS14475;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=C9E97_RS14475;old_locus_tag=C9E97_14785
NZ_PYKA01000105.1	Protein Homology	CDS	49217	49630	.	-	0	ID=cds-WP_088759359.1;Parent=gene-C9E97_RS14475;Dbxref=GenBank:WP_088759359.1;Name=WP_088759359.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpA;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=C9E97_RS14475;product=small heat shock chaperone IbpA;protein_id=WP_088759359.1;transl_table=11
NZ_PYKA01000105.1	cmsearch	sequence_feature	49624	49697	.	-	.	ID=id-NZ_PYKA01000105.1:49624..49697;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PYKA01000105.1	RefSeq	gene	49940	50272	.	+	.	ID=gene-C9E97_RS14480;Name=C9E97_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14480;old_locus_tag=C9E97_14790
NZ_PYKA01000105.1	Protein Homology	CDS	49940	50272	.	+	0	ID=cds-WP_001581211.1;Parent=gene-C9E97_RS14480;Dbxref=GenBank:WP_001581211.1;Name=WP_001581211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675643.1;locus_tag=C9E97_RS14480;product=YceK/YidQ family lipoprotein;protein_id=WP_001581211.1;transl_table=11
NZ_PYKA01000105.1	RefSeq	gene	50274	51500	.	-	.	ID=gene-C9E97_RS14485;Name=C9E97_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14485;old_locus_tag=C9E97_14795
NZ_PYKA01000105.1	Protein Homology	CDS	50274	51500	.	-	0	ID=cds-WP_061378611.1;Parent=gene-C9E97_RS14485;Dbxref=GenBank:WP_061378611.1;Name=WP_061378611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462711.1;locus_tag=C9E97_RS14485;product=DUF3748 domain-containing protein;protein_id=WP_061378611.1;transl_table=11
##sequence-region NZ_PYKA01000117.1 1 51175
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000117.1	RefSeq	region	1	51175	.	+	.	ID=NZ_PYKA01000117.1:1..51175;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000117.1	RefSeq	gene	81	716	.	+	.	ID=gene-C9E97_RS18045;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=C9E97_RS18045;old_locus_tag=C9E97_18435
NZ_PYKA01000117.1	Protein Homology	CDS	81	716	.	+	0	ID=cds-WP_000205986.1;Parent=gene-C9E97_RS18045;Dbxref=GenBank:WP_000205986.1;Name=WP_000205986.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460183.1;locus_tag=C9E97_RS18045;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WP_000205986.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	790	1329	.	-	.	ID=gene-C9E97_RS18050;Name=C9E97_RS18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18050;old_locus_tag=C9E97_18440
NZ_PYKA01000117.1	Protein Homology	CDS	790	1329	.	-	0	ID=cds-WP_001043449.1;Parent=gene-C9E97_RS18050;Dbxref=GenBank:WP_001043449.1;Name=WP_001043449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460182.1;locus_tag=C9E97_RS18050;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001043449.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	1506	2810	.	-	.	ID=gene-C9E97_RS18055;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=C9E97_RS18055;old_locus_tag=C9E97_18445
NZ_PYKA01000117.1	Protein Homology	CDS	1506	2810	.	-	0	ID=cds-WP_000211053.1;Parent=gene-C9E97_RS18055;Dbxref=GenBank:WP_000211053.1;Name=WP_000211053.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=C9E97_RS18055;product=NADH-quinone dehydrogenase;protein_id=WP_000211053.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	3065	3607	.	-	.	ID=gene-C9E97_RS18060;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=C9E97_RS18060;old_locus_tag=C9E97_18450
NZ_PYKA01000117.1	Protein Homology	CDS	3065	3607	.	-	0	ID=cds-WP_000587943.1;Parent=gene-C9E97_RS18060;Dbxref=GenBank:WP_000587943.1;Name=WP_000587943.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=C9E97_RS18060;product=alpha/beta hydrolase YcfP;protein_id=WP_000587943.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	3632	4657	.	-	.	ID=gene-C9E97_RS18065;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=C9E97_RS18065;old_locus_tag=C9E97_18455
NZ_PYKA01000117.1	Protein Homology	CDS	3632	4657	.	-	0	ID=cds-WP_000529339.1;Parent=gene-C9E97_RS18065;Dbxref=GenBank:WP_000529339.1;Name=WP_000529339.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460179.1;locus_tag=C9E97_RS18065;product=beta-N-acetylhexosaminidase;protein_id=WP_000529339.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	4668	5492	.	-	.	ID=gene-C9E97_RS18070;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=C9E97_RS18070;old_locus_tag=C9E97_18460
NZ_PYKA01000117.1	Protein Homology	CDS	4668	5492	.	-	0	ID=cds-WP_135369038.1;Parent=gene-C9E97_RS18070;Dbxref=GenBank:WP_135369038.1;Name=WP_135369038.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460178.1;locus_tag=C9E97_RS18070;product=thiamine kinase;protein_id=WP_135369038.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	5473	6111	.	-	.	ID=gene-C9E97_RS18075;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=C9E97_RS18075;old_locus_tag=C9E97_18465
NZ_PYKA01000117.1	Protein Homology	CDS	5473	6111	.	-	0	ID=cds-WP_000164359.1;Parent=gene-C9E97_RS18075;Dbxref=GenBank:WP_000164359.1;Name=WP_000164359.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460177.1;locus_tag=C9E97_RS18075;product=penicillin-binding protein activator LpoB;protein_id=WP_000164359.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	6125	6499	.	-	.	ID=gene-C9E97_RS18080;Name=C9E97_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18080;old_locus_tag=C9E97_18470
NZ_PYKA01000117.1	Protein Homology	CDS	6125	6499	.	-	0	ID=cds-WP_000589563.1;Parent=gene-C9E97_RS18080;Dbxref=GenBank:WP_000589563.1;Name=WP_000589563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460176.1;locus_tag=C9E97_RS18080;product=YcfL family protein;protein_id=WP_000589563.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	6502	6861	.	-	.	ID=gene-C9E97_RS18085;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=C9E97_RS18085;old_locus_tag=C9E97_18475
NZ_PYKA01000117.1	Protein Homology	CDS	6502	6861	.	-	0	ID=cds-WP_001532068.1;Parent=gene-C9E97_RS18085;Dbxref=GenBank:WP_001532068.1;Name=WP_001532068.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460175.1;locus_tag=C9E97_RS18085;product=purine nucleoside phosphoramidase;protein_id=WP_001532068.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	7203	9377	.	+	.	ID=gene-C9E97_RS18090;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=C9E97_RS18090;old_locus_tag=C9E97_18480
NZ_PYKA01000117.1	Protein Homology	CDS	7203	9377	.	+	0	ID=cds-WP_023182047.1;Parent=gene-C9E97_RS18090;Dbxref=GenBank:WP_023182047.1;Name=WP_023182047.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=C9E97_RS18090;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WP_023182047.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	9463	10896	.	-	.	ID=gene-C9E97_RS18095;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=C9E97_RS18095;old_locus_tag=C9E97_18485
NZ_PYKA01000117.1	Protein Homology	CDS	9463	10896	.	-	0	ID=cds-WP_000475708.1;Parent=gene-C9E97_RS18095;Dbxref=GenBank:WP_000475708.1;Name=WP_000475708.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460173.1;locus_tag=C9E97_RS18095;product=PTS glucose transporter subunit IIBC;protein_id=WP_000475708.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	11191	11988	.	-	.	ID=gene-C9E97_RS18100;Name=C9E97_RS18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18100;old_locus_tag=C9E97_18490
NZ_PYKA01000117.1	Protein Homology	CDS	11191	11988	.	-	0	ID=cds-WP_000480268.1;Parent=gene-C9E97_RS18100;Dbxref=GenBank:WP_000480268.1;Name=WP_000480268.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460172.1;locus_tag=C9E97_RS18100;product=metal-dependent hydrolase;protein_id=WP_000480268.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	11999	13003	.	-	.	ID=gene-C9E97_RS18105;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=C9E97_RS18105;old_locus_tag=C9E97_18495
NZ_PYKA01000117.1	Protein Homology	CDS	11999	13003	.	-	0	ID=cds-WP_000872450.1;Parent=gene-C9E97_RS18105;Dbxref=GenBank:WP_000872450.1;Name=WP_000872450.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460171.1;locus_tag=C9E97_RS18105;product=DNA polymerase III subunit delta';protein_id=WP_000872450.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	13000	13641	.	-	.	ID=gene-C9E97_RS18110;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=C9E97_RS18110;old_locus_tag=C9E97_18500
NZ_PYKA01000117.1	Protein Homology	CDS	13000	13641	.	-	0	ID=cds-WP_000535396.1;Parent=gene-C9E97_RS18110;Dbxref=GenBank:WP_000535396.1;Name=WP_000535396.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460170.1;locus_tag=C9E97_RS18110;product=dTMP kinase;protein_id=WP_000535396.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	13631	14653	.	-	.	ID=gene-C9E97_RS18115;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=C9E97_RS18115;old_locus_tag=C9E97_18505
NZ_PYKA01000117.1	Protein Homology	CDS	13631	14653	.	-	0	ID=cds-WP_000736459.1;Parent=gene-C9E97_RS18115;Dbxref=GenBank:WP_000736459.1;Name=WP_000736459.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460169.1;locus_tag=C9E97_RS18115;product=cell division protein YceG;protein_id=WP_000736459.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	14656	15465	.	-	.	ID=gene-C9E97_RS18120;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=C9E97_RS18120;old_locus_tag=C9E97_18510
NZ_PYKA01000117.1	Protein Homology	CDS	14656	15465	.	-	0	ID=cds-WP_000478660.1;Parent=gene-C9E97_RS18120;Dbxref=GenBank:WP_000478660.1;Name=WP_000478660.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460168.1;locus_tag=C9E97_RS18120;product=aminodeoxychorismate lyase;protein_id=WP_000478660.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	15589	16830	.	-	.	ID=gene-C9E97_RS18125;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=C9E97_RS18125;old_locus_tag=C9E97_18515
NZ_PYKA01000117.1	Protein Homology	CDS	15589	16830	.	-	0	ID=cds-WP_000044664.1;Parent=gene-C9E97_RS18125;Dbxref=GenBank:WP_000044664.1;Name=WP_000044664.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460167.1;locus_tag=C9E97_RS18125;product=beta-ketoacyl-ACP synthase II;protein_id=WP_000044664.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	16916	17152	.	-	.	ID=gene-C9E97_RS18130;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=C9E97_RS18130;old_locus_tag=C9E97_18520
NZ_PYKA01000117.1	Protein Homology	CDS	16916	17152	.	-	0	ID=cds-WP_000103754.1;Parent=gene-C9E97_RS18130;Dbxref=GenBank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=C9E97_RS18130;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	17308	18042	.	-	.	ID=gene-C9E97_RS18135;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=C9E97_RS18135;old_locus_tag=C9E97_18525
NZ_PYKA01000117.1	Protein Homology	CDS	17308	18042	.	-	0	ID=cds-WP_000007236.1;Parent=gene-C9E97_RS18135;Dbxref=GenBank:WP_000007236.1;Name=WP_000007236.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=C9E97_RS18135;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_000007236.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	18055	18984	.	-	.	ID=gene-C9E97_RS18140;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=C9E97_RS18140;old_locus_tag=C9E97_18530
NZ_PYKA01000117.1	Protein Homology	CDS	18055	18984	.	-	0	ID=cds-WP_135369039.1;Parent=gene-C9E97_RS18140;Dbxref=GenBank:WP_135369039.1;Name=WP_135369039.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460164.1;locus_tag=C9E97_RS18140;product=ACP S-malonyltransferase;protein_id=WP_135369039.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	19000	19953	.	-	.	ID=gene-C9E97_RS18145;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=C9E97_RS18145;old_locus_tag=C9E97_18535
NZ_PYKA01000117.1	Protein Homology	CDS	19000	19953	.	-	0	ID=cds-WP_000288148.1;Parent=gene-C9E97_RS18145;Dbxref=GenBank:WP_000288148.1;Name=WP_000288148.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=C9E97_RS18145;product=beta-ketoacyl-ACP synthase III;protein_id=WP_000288148.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	20033	21112	.	-	.	ID=gene-C9E97_RS18150;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=C9E97_RS18150;old_locus_tag=C9E97_18540
NZ_PYKA01000117.1	Protein Homology	CDS	20033	21112	.	-	0	ID=cds-WP_001518286.1;Parent=gene-C9E97_RS18150;Dbxref=GenBank:WP_001518286.1;Name=WP_001518286.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460162.1;locus_tag=C9E97_RS18150;product=phosphate acyltransferase PlsX;protein_id=WP_001518286.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	21246	21419	.	-	.	ID=gene-C9E97_RS18155;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=C9E97_RS18155;old_locus_tag=C9E97_18545
NZ_PYKA01000117.1	Protein Homology	CDS	21246	21419	.	-	0	ID=cds-WP_000290727.1;Parent=gene-C9E97_RS18155;Dbxref=GenBank:WP_000290727.1;Name=WP_000290727.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=C9E97_RS18155;product=50S ribosomal protein L32;protein_id=WP_000290727.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	21471	21992	.	-	.	ID=gene-C9E97_RS18160;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=C9E97_RS18160;old_locus_tag=C9E97_18550
NZ_PYKA01000117.1	Protein Homology	CDS	21471	21992	.	-	0	ID=cds-WP_001174492.1;Parent=gene-C9E97_RS18160;Dbxref=GenBank:WP_001174492.1;Name=WP_001174492.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=C9E97_RS18160;product=23S rRNA accumulation protein YceD;protein_id=WP_001174492.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	22190	22774	.	+	.	ID=gene-C9E97_RS18165;Name=C9E97_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18165;old_locus_tag=C9E97_18555
NZ_PYKA01000117.1	Protein Homology	CDS	22190	22774	.	+	0	ID=cds-WP_001137605.1;Parent=gene-C9E97_RS18165;Dbxref=GenBank:WP_001137605.1;Name=WP_001137605.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460159.1;locus_tag=C9E97_RS18165;product=Maf family protein;protein_id=WP_001137605.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	22846	23070	.	-	.	ID=gene-C9E97_RS18170;Name=C9E97_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18170;old_locus_tag=C9E97_18560
NZ_PYKA01000117.1	GeneMarkS-2+	CDS	22846	23070	.	-	0	ID=cds-WP_000528423.1;Parent=gene-C9E97_RS18170;Dbxref=GenBank:WP_000528423.1;Name=WP_000528423.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E97_RS18170;product=hypothetical protein;protein_id=WP_000528423.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	23276	24019	.	-	.	ID=gene-C9E97_RS18175;Name=C9E97_RS18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18175;old_locus_tag=C9E97_18565
NZ_PYKA01000117.1	Protein Homology	CDS	23276	24019	.	-	0	ID=cds-WP_080083309.1;Parent=gene-C9E97_RS18175;Dbxref=GenBank:WP_080083309.1;Name=WP_080083309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460158.1;locus_tag=C9E97_RS18175;product=DUF3053 domain-containing protein;protein_id=WP_080083309.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	24175	25134	.	-	.	ID=gene-C9E97_RS18180;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=C9E97_RS18180;old_locus_tag=C9E97_18570
NZ_PYKA01000117.1	Protein Homology	CDS	24175	25134	.	-	0	ID=cds-WP_000846316.1;Parent=gene-C9E97_RS18180;Dbxref=GenBank:WP_000846316.1;Name=WP_000846316.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460157.1;locus_tag=C9E97_RS18180;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_000846316.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	25708	28911	.	+	.	ID=gene-C9E97_RS18190;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=C9E97_RS18190;old_locus_tag=C9E97_18580
NZ_PYKA01000117.1	Protein Homology	CDS	25708	28911	.	+	0	ID=cds-WP_135369040.1;Parent=gene-C9E97_RS18190;Dbxref=GenBank:WP_135369040.1;Name=WP_135369040.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460156.1;locus_tag=C9E97_RS18190;product=ribonuclease E;protein_id=WP_135369040.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	29168	30121	.	-	.	ID=gene-C9E97_RS18195;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=C9E97_RS18195;old_locus_tag=C9E97_18590
NZ_PYKA01000117.1	Protein Homology	CDS	29168	30121	.	-	0	ID=cds-WP_001223032.1;Parent=gene-C9E97_RS18195;Dbxref=GenBank:WP_001223032.1;Name=WP_001223032.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460155.1;locus_tag=C9E97_RS18195;product=flagellar hook-associated protein FlgL;protein_id=WP_001223032.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	30136	31797	.	-	.	ID=gene-C9E97_RS18200;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=C9E97_RS18200;old_locus_tag=C9E97_18595
NZ_PYKA01000117.1	Protein Homology	CDS	30136	31797	.	-	0	ID=cds-WP_000096425.1;Parent=gene-C9E97_RS18200;Dbxref=GenBank:WP_000096425.1;Name=WP_000096425.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460154.1;locus_tag=C9E97_RS18200;product=flagellar hook-associated protein FlgK;protein_id=WP_000096425.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	31862	32812	.	-	.	ID=gene-C9E97_RS18205;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=C9E97_RS18205;old_locus_tag=C9E97_18600
NZ_PYKA01000117.1	Protein Homology	CDS	31862	32812	.	-	0	ID=cds-WP_000578685.1;Parent=gene-C9E97_RS18205;Dbxref=GenBank:WP_000578685.1;Name=WP_000578685.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460153.1;locus_tag=C9E97_RS18205;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_000578685.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	32812	33909	.	-	.	ID=gene-C9E97_RS18210;Name=C9E97_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18210;old_locus_tag=C9E97_18605
NZ_PYKA01000117.1	Protein Homology	CDS	32812	33909	.	-	0	ID=cds-WP_001518955.1;Parent=gene-C9E97_RS18210;Dbxref=GenBank:WP_001518955.1;Name=WP_001518955.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460152.1;locus_tag=C9E97_RS18210;product=flagellar basal body P-ring protein FlgI;protein_id=WP_001518955.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	33921	34619	.	-	.	ID=gene-C9E97_RS18215;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=C9E97_RS18215;old_locus_tag=C9E97_18610
NZ_PYKA01000117.1	Protein Homology	CDS	33921	34619	.	-	0	ID=cds-WP_001174897.1;Parent=gene-C9E97_RS18215;Dbxref=GenBank:WP_001174897.1;Name=WP_001174897.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460151.1;locus_tag=C9E97_RS18215;product=flagellar basal body L-ring protein FlgH;protein_id=WP_001174897.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	34674	35456	.	-	.	ID=gene-C9E97_RS18220;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=C9E97_RS18220;old_locus_tag=C9E97_18615
NZ_PYKA01000117.1	Protein Homology	CDS	34674	35456	.	-	0	ID=cds-WP_000625851.1;Parent=gene-C9E97_RS18220;Dbxref=GenBank:WP_000625851.1;Name=WP_000625851.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=C9E97_RS18220;product=flagellar basal-body rod protein FlgG;protein_id=WP_000625851.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	35470	36225	.	-	.	ID=gene-C9E97_RS18225;Name=C9E97_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18225;old_locus_tag=C9E97_18620
NZ_PYKA01000117.1	Protein Homology	CDS	35470	36225	.	-	0	ID=cds-WP_000349278.1;Parent=gene-C9E97_RS18225;Dbxref=GenBank:WP_000349278.1;Name=WP_000349278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460149.1;locus_tag=C9E97_RS18225;product=flagellar basal body rod protein FlgF;protein_id=WP_000349278.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	36246	37457	.	-	.	ID=gene-C9E97_RS18230;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=C9E97_RS18230;old_locus_tag=C9E97_18625
NZ_PYKA01000117.1	Protein Homology	CDS	36246	37457	.	-	0	ID=cds-WP_000010567.1;Parent=gene-C9E97_RS18230;Dbxref=GenBank:WP_000010567.1;Name=WP_000010567.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460148.1;locus_tag=C9E97_RS18230;product=flagellar hook protein FlgE;protein_id=WP_000010567.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	37484	38182	.	-	.	ID=gene-C9E97_RS18235;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=C9E97_RS18235;old_locus_tag=C9E97_18630
NZ_PYKA01000117.1	Protein Homology	CDS	37484	38182	.	-	0	ID=cds-WP_000020450.1;Parent=gene-C9E97_RS18235;Dbxref=GenBank:WP_000020450.1;Name=WP_000020450.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460147.1;locus_tag=C9E97_RS18235;product=flagellar hook assembly protein FlgD;protein_id=WP_000020450.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	38194	38598	.	-	.	ID=gene-C9E97_RS18240;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=C9E97_RS18240;old_locus_tag=C9E97_18635
NZ_PYKA01000117.1	Protein Homology	CDS	38194	38598	.	-	0	ID=cds-WP_001196448.1;Parent=gene-C9E97_RS18240;Dbxref=GenBank:WP_001196448.1;Name=WP_001196448.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=C9E97_RS18240;product=flagellar basal body rod protein FlgC;protein_id=WP_001196448.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	38602	39018	.	-	.	ID=gene-C9E97_RS18245;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=C9E97_RS18245;old_locus_tag=C9E97_18640
NZ_PYKA01000117.1	Protein Homology	CDS	38602	39018	.	-	0	ID=cds-WP_000887043.1;Parent=gene-C9E97_RS18245;Dbxref=GenBank:WP_000887043.1;Name=WP_000887043.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460145.1;locus_tag=C9E97_RS18245;product=flagellar basal body rod protein FlgB;protein_id=WP_000887043.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	39175	39834	.	+	.	ID=gene-C9E97_RS18250;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=C9E97_RS18250;old_locus_tag=C9E97_18650
NZ_PYKA01000117.1	Protein Homology	CDS	39175	39834	.	+	0	ID=cds-WP_001194086.1;Parent=gene-C9E97_RS18250;Dbxref=GenBank:WP_001194086.1;Name=WP_001194086.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460144.1;locus_tag=C9E97_RS18250;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_001194086.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	39926	40219	.	+	.	ID=gene-C9E97_RS18255;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=C9E97_RS18255;old_locus_tag=C9E97_18655
NZ_PYKA01000117.1	Protein Homology	CDS	39926	40219	.	+	0	ID=cds-WP_000020893.1;Parent=gene-C9E97_RS18255;Dbxref=GenBank:WP_000020893.1;Name=WP_000020893.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460143.1;locus_tag=C9E97_RS18255;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000020893.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	40224	40646	.	+	.	ID=gene-C9E97_RS18260;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=C9E97_RS18260;old_locus_tag=C9E97_18660
NZ_PYKA01000117.1	Protein Homology	CDS	40224	40646	.	+	0	ID=cds-WP_000197547.1;Parent=gene-C9E97_RS18260;Dbxref=GenBank:WP_000197547.1;Name=WP_000197547.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460142.1;locus_tag=C9E97_RS18260;product=flagella biosynthesis chaperone FlgN;protein_id=WP_000197547.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	40728	42263	.	-	.	ID=gene-C9E97_RS18265;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=C9E97_RS18265;old_locus_tag=C9E97_18665
NZ_PYKA01000117.1	Protein Homology	CDS	40728	42263	.	-	0	ID=cds-WP_001537775.1;Parent=gene-C9E97_RS18265;Dbxref=GenBank:WP_001537775.1;Name=WP_001537775.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226258.1;locus_tag=C9E97_RS18265;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_001537775.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	42567	43490	.	-	.	ID=gene-C9E97_RS18270;Name=C9E97_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18270;old_locus_tag=C9E97_18670
NZ_PYKA01000117.1	Protein Homology	CDS	42567	43490	.	-	0	ID=cds-WP_135369041.1;Parent=gene-C9E97_RS18270;Dbxref=GenBank:WP_135369041.1;Name=WP_135369041.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460140.1;locus_tag=C9E97_RS18270;product=Gfo/Idh/MocA family protein;protein_id=WP_135369041.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	43492	44139	.	-	.	ID=gene-C9E97_RS18275;Name=C9E97_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18275;old_locus_tag=C9E97_18675
NZ_PYKA01000117.1	Protein Homology	CDS	43492	44139	.	-	0	ID=cds-WP_000873047.1;Parent=gene-C9E97_RS18275;Dbxref=GenBank:WP_000873047.1;Name=WP_000873047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460139.1;locus_tag=C9E97_RS18275;product=YceH family protein;protein_id=WP_000873047.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	44175	44759	.	-	.	ID=gene-C9E97_RS18280;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=C9E97_RS18280;old_locus_tag=C9E97_18680
NZ_PYKA01000117.1	Protein Homology	CDS	44175	44759	.	-	0	ID=cds-WP_000468204.1;Parent=gene-C9E97_RS18280;Dbxref=GenBank:WP_000468204.1;Name=WP_000468204.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460138.1;locus_tag=C9E97_RS18280;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_000468204.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	44996	46204	.	+	.	ID=gene-C9E97_RS18285;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=C9E97_RS18285;old_locus_tag=C9E97_18685
NZ_PYKA01000117.1	Protein Homology	CDS	44996	46204	.	+	0	ID=cds-WP_000092178.1;Parent=gene-C9E97_RS18285;Dbxref=GenBank:WP_000092178.1;Name=WP_000092178.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=C9E97_RS18285;product=multidrug efflux MFS transporter MdtH;protein_id=WP_000092178.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	46268	46915	.	+	.	ID=gene-C9E97_RS18290;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=C9E97_RS18290;old_locus_tag=C9E97_18690
NZ_PYKA01000117.1	Protein Homology	CDS	46268	46915	.	+	0	ID=cds-WP_000780893.1;Parent=gene-C9E97_RS18290;Dbxref=GenBank:WP_000780893.1;Name=WP_000780893.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460136.1;locus_tag=C9E97_RS18290;product=glutaredoxin 2;protein_id=WP_000780893.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	47040	47600	.	+	.	ID=gene-C9E97_RS18295;Name=C9E97_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18295;old_locus_tag=C9E97_18695
NZ_PYKA01000117.1	Protein Homology	CDS	47040	47600	.	+	0	ID=cds-WP_000713054.1;Parent=gene-C9E97_RS18295;Dbxref=GenBank:WP_000713054.1;Name=WP_000713054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460135.1;locus_tag=C9E97_RS18295;product=lipoprotein;protein_id=WP_000713054.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	47704	48750	.	+	.	ID=gene-C9E97_RS18300;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=C9E97_RS18300;old_locus_tag=C9E97_18700
NZ_PYKA01000117.1	Protein Homology	CDS	47704	48750	.	+	0	ID=cds-WP_000126604.1;Parent=gene-C9E97_RS18300;Dbxref=GenBank:WP_000126604.1;Name=WP_000126604.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460134.1;locus_tag=C9E97_RS18300;product=dihydroorotase;protein_id=WP_000126604.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	48824	49069	.	+	.	ID=gene-C9E97_RS18305;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=C9E97_RS18305;old_locus_tag=C9E97_18705
NZ_PYKA01000117.1	Protein Homology	CDS	48824	49069	.	+	0	ID=cds-WP_001217763.1;Parent=gene-C9E97_RS18305;Dbxref=GenBank:WP_001217763.1;Name=WP_001217763.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460133.1;locus_tag=C9E97_RS18305;product=DNA damage-inducible protein I;protein_id=WP_001217763.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	49359	49613	.	+	.	ID=gene-C9E97_RS18310;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=C9E97_RS18310;old_locus_tag=C9E97_18710
NZ_PYKA01000117.1	Protein Homology	CDS	49359	49613	.	+	0	ID=cds-WP_000414441.1;Parent=gene-C9E97_RS18310;Dbxref=GenBank:WP_000414441.1;Name=WP_000414441.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460132.3;locus_tag=C9E97_RS18310;product=biofilm formation regulator BssS;protein_id=WP_000414441.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	49726	50844	.	+	.	ID=gene-C9E97_RS18315;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=C9E97_RS18315;old_locus_tag=C9E97_18715
NZ_PYKA01000117.1	Protein Homology	CDS	49726	50844	.	+	0	ID=cds-WP_001524750.1;Parent=gene-C9E97_RS18315;Dbxref=GenBank:WP_001524750.1;Name=WP_001524750.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460131.1;locus_tag=C9E97_RS18315;product=N-methyl-L-tryptophan oxidase;protein_id=WP_001524750.1;transl_table=11
NZ_PYKA01000117.1	RefSeq	gene	50885	50998	.	+	.	ID=gene-C9E97_RS18320;Name=C9E97_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18320;old_locus_tag=C9E97_18720
NZ_PYKA01000117.1	Protein Homology	CDS	50885	50998	.	+	0	ID=cds-WP_001253282.1;Parent=gene-C9E97_RS18320;Dbxref=GenBank:WP_001253282.1;Name=WP_001253282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460130.1;locus_tag=C9E97_RS18320;product=YceO family protein;protein_id=WP_001253282.1;transl_table=11
##sequence-region NZ_PYKA01000048.1 1 49948
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000048.1	RefSeq	region	1	49948	.	+	.	ID=NZ_PYKA01000048.1:1..49948;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000048.1	RefSeq	gene	305	820	.	-	.	ID=gene-C9E97_RS06830;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=C9E97_RS06830;old_locus_tag=C9E97_07000
NZ_PYKA01000048.1	Protein Homology	CDS	305	820	.	-	0	ID=cds-WP_010989085.1;Parent=gene-C9E97_RS06830;Dbxref=GenBank:WP_010989085.1;Name=WP_010989085.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462873.1;locus_tag=C9E97_RS06830;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_010989085.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	817	1401	.	-	.	ID=gene-C9E97_RS06835;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=C9E97_RS06835;old_locus_tag=C9E97_07005
NZ_PYKA01000048.1	Protein Homology	CDS	817	1401	.	-	0	ID=cds-WP_001046891.1;Parent=gene-C9E97_RS06835;Dbxref=GenBank:WP_001046891.1;Name=WP_001046891.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462874.1;locus_tag=C9E97_RS06835;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_001046891.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	1471	1740	.	+	.	ID=gene-C9E97_RS06840;Name=C9E97_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06840;old_locus_tag=C9E97_07010
NZ_PYKA01000048.1	Protein Homology	CDS	1471	1740	.	+	0	ID=cds-WP_000649858.1;Parent=gene-C9E97_RS06840;Dbxref=GenBank:WP_000649858.1;Name=WP_000649858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=C9E97_RS06840;product=YihD family protein;protein_id=WP_000649858.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	1820	2806	.	+	.	ID=gene-C9E97_RS06845;Name=C9E97_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06845;old_locus_tag=C9E97_07015
NZ_PYKA01000048.1	Protein Homology	CDS	1820	2806	.	+	0	ID=cds-WP_000999264.1;Parent=gene-C9E97_RS06845;Dbxref=GenBank:WP_000999264.1;Name=WP_000999264.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462876.1;locus_tag=C9E97_RS06845;product=serine/threonine protein kinase;protein_id=WP_000999264.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	2823	3446	.	+	.	ID=gene-C9E97_RS06850;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=C9E97_RS06850;old_locus_tag=C9E97_07020
NZ_PYKA01000048.1	Protein Homology	CDS	2823	3446	.	+	0	ID=cds-WP_000725364.1;Parent=gene-C9E97_RS06850;Dbxref=GenBank:WP_000725364.1;Name=WP_000725364.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462877.1;locus_tag=C9E97_RS06850;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725364.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	3459	4367	.	-	.	ID=gene-C9E97_RS06855;Name=C9E97_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06855;old_locus_tag=C9E97_07025
NZ_PYKA01000048.1	Protein Homology	CDS	3459	4367	.	-	0	ID=cds-WP_079802097.1;Parent=gene-C9E97_RS06855;Dbxref=GenBank:WP_079802097.1;Name=WP_079802097.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954815.1;locus_tag=C9E97_RS06855;product=acyltransferase;protein_id=WP_079802097.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	4755	7541	.	+	.	ID=gene-C9E97_RS06865;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=C9E97_RS06865;old_locus_tag=C9E97_07035
NZ_PYKA01000048.1	Protein Homology	CDS	4755	7541	.	+	0	ID=cds-WP_079928028.1;Parent=gene-C9E97_RS06865;Dbxref=GenBank:WP_079928028.1;Name=WP_079928028.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462879.1;locus_tag=C9E97_RS06865;product=DNA polymerase I;protein_id=WP_079928028.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	7880	8515	.	-	.	ID=gene-C9E97_RS06870;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=C9E97_RS06870;old_locus_tag=C9E97_07040
NZ_PYKA01000048.1	Protein Homology	CDS	7880	8515	.	-	0	ID=cds-WP_001651150.1;Parent=gene-C9E97_RS06870;Dbxref=GenBank:WP_001651150.1;Name=WP_001651150.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462881.1;locus_tag=C9E97_RS06870;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_001651150.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	8755	8979	.	+	.	ID=gene-C9E97_RS06875;Name=C9E97_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06875;old_locus_tag=C9E97_07045
NZ_PYKA01000048.1	Protein Homology	CDS	8755	8979	.	+	0	ID=cds-WP_001541209.1;Parent=gene-C9E97_RS06875;Dbxref=GenBank:WP_001541209.1;Name=WP_001541209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462882.1;locus_tag=C9E97_RS06875;product=hypothetical protein;protein_id=WP_001541209.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	9098	9613	.	+	.	ID=gene-C9E97_RS06880;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=C9E97_RS06880;old_locus_tag=C9E97_07050
NZ_PYKA01000048.1	Protein Homology	CDS	9098	9613	.	+	0	ID=cds-WP_000743292.1;Parent=gene-C9E97_RS06880;Dbxref=GenBank:WP_000743292.1;Name=WP_000743292.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462883.1;locus_tag=C9E97_RS06880;product=Der GTPase-activating protein YihI;protein_id=WP_000743292.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	9802	11175	.	+	.	ID=gene-C9E97_RS06885;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=C9E97_RS06885;old_locus_tag=C9E97_07055
NZ_PYKA01000048.1	Protein Homology	CDS	9802	11175	.	+	0	ID=cds-WP_000003527.1;Parent=gene-C9E97_RS06885;Dbxref=GenBank:WP_000003527.1;Name=WP_000003527.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462884.1;locus_tag=C9E97_RS06885;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_000003527.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	11265	11375	.	-	.	ID=gene-C9E97_RS06890;Name=C9E97_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06890;old_locus_tag=C9E97_07060
NZ_PYKA01000048.1	Protein Homology	CDS	11265	11375	.	-	0	ID=cds-WP_001578131.1;Parent=gene-C9E97_RS06890;Dbxref=GenBank:WP_001578131.1;Name=WP_001578131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=C9E97_RS06890;product=YshB family small membrane protein;protein_id=WP_001578131.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	11488	12897	.	-	.	ID=gene-C9E97_RS06895;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=C9E97_RS06895;old_locus_tag=C9E97_07065
NZ_PYKA01000048.1	Protein Homology	CDS	11488	12897	.	-	0	ID=cds-WP_001188782.1;Parent=gene-C9E97_RS06895;Dbxref=GenBank:WP_001188782.1;Name=WP_001188782.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=C9E97_RS06895;product=nitrogen regulation protein NR(I);protein_id=WP_001188782.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	12906	13955	.	-	.	ID=gene-C9E97_RS06900;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=C9E97_RS06900;old_locus_tag=C9E97_07070
NZ_PYKA01000048.1	Protein Homology	CDS	12906	13955	.	-	0	ID=cds-WP_000146194.1;Parent=gene-C9E97_RS06900;Dbxref=GenBank:WP_000146194.1;Name=WP_000146194.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462886.1;locus_tag=C9E97_RS06900;product=nitrogen regulation protein NR(II);protein_id=WP_000146194.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	14230	15639	.	-	.	ID=gene-C9E97_RS06910;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=C9E97_RS06910;old_locus_tag=C9E97_07080
NZ_PYKA01000048.1	Protein Homology	CDS	14230	15639	.	-	0	ID=cds-WP_001271699.1;Parent=gene-C9E97_RS06910;Dbxref=GenBank:WP_001271699.1;Name=WP_001271699.1;Ontology_term=GO:0006542,GO:0008152,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=C9E97_RS06910;product=glutamate--ammonia ligase;protein_id=WP_001271699.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	16015	17838	.	+	.	ID=gene-C9E97_RS06915;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=C9E97_RS06915;old_locus_tag=C9E97_07090
NZ_PYKA01000048.1	Protein Homology	CDS	16015	17838	.	+	0	ID=cds-WP_000572064.1;Parent=gene-C9E97_RS06915;Dbxref=GenBank:WP_000572064.1;Name=WP_000572064.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462889.1;locus_tag=C9E97_RS06915;product=ribosome-dependent GTPase TypA;protein_id=WP_000572064.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	17893	18627	.	-	.	ID=gene-C9E97_RS06920;Name=C9E97_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06920;old_locus_tag=C9E97_07095
NZ_PYKA01000048.1	Protein Homology	CDS	17893	18627	.	-	0	ID=cds-WP_023250031.1;Parent=gene-C9E97_RS06920;Dbxref=GenBank:WP_023250031.1;Name=WP_023250031.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462890.1;locus_tag=C9E97_RS06920;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_023250031.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	18612	19490	.	-	.	ID=gene-C9E97_RS06925;Name=C9E97_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06925;old_locus_tag=C9E97_07100
NZ_PYKA01000048.1	Protein Homology	CDS	18612	19490	.	-	0	ID=cds-WP_094885034.1;Parent=gene-C9E97_RS06925;Dbxref=GenBank:WP_094885034.1;Name=WP_094885034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462891.1;locus_tag=C9E97_RS06925;product=STM4011 family radical SAM protein;protein_id=WP_094885034.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	19487	20728	.	-	.	ID=gene-C9E97_RS06930;Name=C9E97_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06930;old_locus_tag=C9E97_07105
NZ_PYKA01000048.1	Protein Homology	CDS	19487	20728	.	-	0	ID=cds-WP_135369694.1;Parent=gene-C9E97_RS06930;Dbxref=GenBank:WP_135369694.1;Name=WP_135369694.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462892.1;locus_tag=C9E97_RS06930;product=STM4012 family radical SAM protein;protein_id=WP_135369694.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	20730	21605	.	-	.	ID=gene-C9E97_RS06935;Name=C9E97_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06935;old_locus_tag=C9E97_07110
NZ_PYKA01000048.1	Protein Homology	CDS	20730	21605	.	-	0	ID=cds-WP_135369695.1;Parent=gene-C9E97_RS06935;Dbxref=GenBank:WP_135369695.1;Name=WP_135369695.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462893.3;locus_tag=C9E97_RS06935;product=STM4013/SEN3800 family hydrolase;protein_id=WP_135369695.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	21598	22623	.	-	.	ID=gene-C9E97_RS06940;Name=C9E97_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06940;old_locus_tag=C9E97_07115
NZ_PYKA01000048.1	Protein Homology	CDS	21598	22623	.	-	0	ID=cds-WP_135369696.1;Parent=gene-C9E97_RS06940;Dbxref=GenBank:WP_135369696.1;Name=WP_135369696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462894.3;locus_tag=C9E97_RS06940;product=STM4014 family protein;protein_id=WP_135369696.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	22636	23484	.	-	.	ID=gene-C9E97_RS06945;Name=C9E97_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06945;old_locus_tag=C9E97_07120
NZ_PYKA01000048.1	Protein Homology	CDS	22636	23484	.	-	0	ID=cds-WP_135369697.1;Parent=gene-C9E97_RS06945;Dbxref=GenBank:WP_135369697.1;Name=WP_135369697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462895.1;locus_tag=C9E97_RS06945;product=STM4015 family protein;protein_id=WP_135369697.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	23641	24333	.	-	.	ID=gene-C9E97_RS06950;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=C9E97_RS06950;old_locus_tag=C9E97_07125
NZ_PYKA01000048.1	Protein Homology	CDS	23641	24333	.	-	0	ID=cds-WP_000838829.1;Parent=gene-C9E97_RS06950;Dbxref=GenBank:WP_000838829.1;Name=WP_000838829.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462896.1;locus_tag=C9E97_RS06950;product=porin OmpL;protein_id=WP_000838829.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	24401	25819	.	-	.	ID=gene-C9E97_RS06955;Name=C9E97_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06955;old_locus_tag=C9E97_07130
NZ_PYKA01000048.1	Protein Homology	CDS	24401	25819	.	-	0	ID=cds-WP_001112785.1;Parent=gene-C9E97_RS06955;Dbxref=GenBank:WP_001112785.1;Name=WP_001112785.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462897.1;locus_tag=C9E97_RS06955;product=MFS transporter;protein_id=WP_001112785.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	25865	27247	.	-	.	ID=gene-C9E97_RS06960;Name=C9E97_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06960;old_locus_tag=C9E97_07135
NZ_PYKA01000048.1	Protein Homology	CDS	25865	27247	.	-	0	ID=cds-WP_000084233.1;Parent=gene-C9E97_RS06960;Dbxref=GenBank:WP_000084233.1;Name=WP_000084233.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084232.1;locus_tag=C9E97_RS06960;product=MFS transporter;protein_id=WP_000084233.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	27293	29329	.	-	.	ID=gene-C9E97_RS06965;Name=C9E97_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06965;old_locus_tag=C9E97_07140
NZ_PYKA01000048.1	Protein Homology	CDS	27293	29329	.	-	0	ID=cds-WP_135369698.1;Parent=gene-C9E97_RS06965;Dbxref=GenBank:WP_135369698.1;Name=WP_135369698.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523759.1;locus_tag=C9E97_RS06965;product=alpha-glucosidase;protein_id=WP_135369698.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	29453	30328	.	-	.	ID=gene-C9E97_RS06970;Name=C9E97_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06970;old_locus_tag=C9E97_07145
NZ_PYKA01000048.1	Protein Homology	CDS	29453	30328	.	-	0	ID=cds-WP_000345334.1;Parent=gene-C9E97_RS06970;Dbxref=GenBank:WP_000345334.1;Name=WP_000345334.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312828.1;locus_tag=C9E97_RS06970;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000345334.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	30417	31319	.	-	.	ID=gene-C9E97_RS06975;Name=C9E97_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06975;old_locus_tag=C9E97_07150
NZ_PYKA01000048.1	Protein Homology	CDS	30417	31319	.	-	0	ID=cds-WP_024131638.1;Parent=gene-C9E97_RS06975;Dbxref=GenBank:WP_024131638.1;Name=WP_024131638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001611165.1;locus_tag=C9E97_RS06975;product=aldose-1-epimerase;protein_id=WP_024131638.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	31391	32632	.	-	.	ID=gene-C9E97_RS06980;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=C9E97_RS06980;old_locus_tag=C9E97_07155
NZ_PYKA01000048.1	Protein Homology	CDS	31391	32632	.	-	0	ID=cds-WP_000870940.1;Parent=gene-C9E97_RS06980;Dbxref=GenBank:WP_000870940.1;Name=WP_000870940.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312830.1;locus_tag=C9E97_RS06980;product=sulfoquinovose isomerase;protein_id=WP_000870940.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	32648	33526	.	-	.	ID=gene-C9E97_RS06985;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=C9E97_RS06985;old_locus_tag=C9E97_07160
NZ_PYKA01000048.1	Protein Homology	CDS	32648	33526	.	-	0	ID=cds-WP_135369784.1;Parent=gene-C9E97_RS06985;Dbxref=GenBank:WP_135369784.1;Name=WP_135369784.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462902.1;locus_tag=C9E97_RS06985;product=sulfofructosephosphate aldolase;protein_id=WP_135369784.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	33549	34445	.	-	.	ID=gene-C9E97_RS06990;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=C9E97_RS06990;old_locus_tag=C9E97_07165
NZ_PYKA01000048.1	Protein Homology	CDS	33549	34445	.	-	0	ID=cds-WP_000268248.1;Parent=gene-C9E97_RS06990;Dbxref=GenBank:WP_000268248.1;Name=WP_000268248.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462903.1;locus_tag=C9E97_RS06990;product=sulfolactaldehyde 3-reductase;protein_id=WP_000268248.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	34610	35506	.	+	.	ID=gene-C9E97_RS06995;Name=C9E97_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06995;old_locus_tag=C9E97_07170
NZ_PYKA01000048.1	Protein Homology	CDS	34610	35506	.	+	0	ID=cds-WP_001520529.1;Parent=gene-C9E97_RS06995;Dbxref=GenBank:WP_001520529.1;Name=WP_001520529.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462904.3;locus_tag=C9E97_RS06995;product=sugar kinase;protein_id=WP_001520529.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	35540	36343	.	+	.	ID=gene-C9E97_RS07000;Name=C9E97_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07000;old_locus_tag=C9E97_07175
NZ_PYKA01000048.1	Protein Homology	CDS	35540	36343	.	+	0	ID=cds-WP_000059693.1;Parent=gene-C9E97_RS07000;Dbxref=GenBank:WP_000059693.1;Name=WP_000059693.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462905.1;locus_tag=C9E97_RS07000;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000059693.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	36534	37133	.	+	.	ID=gene-C9E97_RS07005;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=C9E97_RS07005;old_locus_tag=C9E97_07180
NZ_PYKA01000048.1	Protein Homology	CDS	36534	37133	.	+	0	ID=cds-WP_000965698.1;Parent=gene-C9E97_RS07005;Dbxref=GenBank:WP_000965698.1;Name=WP_000965698.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462906.1;locus_tag=C9E97_RS07005;product=glucose-1-phosphatase;protein_id=WP_000965698.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	37127	37999	.	+	.	ID=gene-C9E97_RS07010;Name=C9E97_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07010;old_locus_tag=C9E97_07185
NZ_PYKA01000048.1	Protein Homology	CDS	37127	37999	.	+	0	ID=cds-WP_000921423.1;Parent=gene-C9E97_RS07010;Dbxref=GenBank:WP_000921423.1;Name=WP_000921423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462907.1;locus_tag=C9E97_RS07010;product=virulence factor BrkB family protein;protein_id=WP_000921423.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	37996	38433	.	+	.	ID=gene-C9E97_RS07015;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=C9E97_RS07015;old_locus_tag=C9E97_07190
NZ_PYKA01000048.1	Protein Homology	CDS	37996	38433	.	+	0	ID=cds-WP_000560974.1;Parent=gene-C9E97_RS07015;Dbxref=GenBank:WP_000560974.1;Name=WP_000560974.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=C9E97_RS07015;product=D-aminoacyl-tRNA deacylase;protein_id=WP_000560974.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	38478	39419	.	+	.	ID=gene-C9E97_RS07020;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=C9E97_RS07020;old_locus_tag=C9E97_07195
NZ_PYKA01000048.1	Protein Homology	CDS	38478	39419	.	+	0	ID=cds-WP_001518251.1;Parent=gene-C9E97_RS07020;Dbxref=GenBank:WP_001518251.1;Name=WP_001518251.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=C9E97_RS07020;product=fatty acid biosynthesis protein FabY;protein_id=WP_001518251.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	39434	39880	.	-	.	ID=gene-C9E97_RS07025;Name=C9E97_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07025;old_locus_tag=C9E97_07200
NZ_PYKA01000048.1	Protein Homology	CDS	39434	39880	.	-	0	ID=cds-WP_031609809.1;Parent=gene-C9E97_RS07025;Dbxref=GenBank:WP_031609809.1;Name=WP_031609809.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462910.3;locus_tag=C9E97_RS07025;product=helix-turn-helix domain-containing protein;protein_id=WP_031609809.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	39877	40188	.	-	.	ID=gene-C9E97_RS07030;Name=C9E97_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07030;old_locus_tag=C9E97_07205
NZ_PYKA01000048.1	Protein Homology	CDS	39877	40188	.	-	0	ID=cds-WP_000558166.1;Parent=gene-C9E97_RS07030;Dbxref=GenBank:WP_000558166.1;Name=WP_000558166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462911.1;locus_tag=C9E97_RS07030;product=type II toxin-antitoxin system HigB family toxin;protein_id=WP_000558166.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	40274	41203	.	-	.	ID=gene-C9E97_RS07035;Name=C9E97_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07035;old_locus_tag=C9E97_07210
NZ_PYKA01000048.1	Protein Homology	CDS	40274	41203	.	-	0	ID=cds-WP_135369783.1;Parent=gene-C9E97_RS07035;Dbxref=GenBank:WP_135369783.1;Name=WP_135369783.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462912.1;locus_tag=C9E97_RS07035;product=alpha/beta hydrolase;protein_id=WP_135369783.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	41421	41732	.	+	.	ID=gene-C9E97_RS07040;Name=C9E97_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07040;old_locus_tag=C9E97_07215
NZ_PYKA01000048.1	Protein Homology	CDS	41421	41732	.	+	0	ID=cds-WP_001159632.1;Parent=gene-C9E97_RS07040;Dbxref=GenBank:WP_001159632.1;Name=WP_001159632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001159636.1;locus_tag=C9E97_RS07040;product=cytotoxic translational repressor of toxin-antitoxin stability system;protein_id=WP_001159632.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	41733	42023	.	+	.	ID=gene-C9E97_RS07045;Name=C9E97_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07045;old_locus_tag=C9E97_07220
NZ_PYKA01000048.1	Protein Homology	CDS	41733	42023	.	+	0	ID=cds-WP_000362050.1;Parent=gene-C9E97_RS07045;Dbxref=GenBank:WP_000362050.1;Name=WP_000362050.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264433.1;locus_tag=C9E97_RS07045;product=helix-turn-helix domain-containing protein;protein_id=WP_000362050.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	42070	42999	.	-	.	ID=gene-C9E97_RS07050;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=C9E97_RS07050;old_locus_tag=C9E97_07225
NZ_PYKA01000048.1	Protein Homology	CDS	42070	42999	.	-	0	ID=cds-WP_000027730.1;Parent=gene-C9E97_RS07050;Dbxref=GenBank:WP_000027730.1;Name=WP_000027730.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=C9E97_RS07050;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_000027730.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	42996	43631	.	-	.	ID=gene-C9E97_RS07055;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=C9E97_RS07055;old_locus_tag=C9E97_07230
NZ_PYKA01000048.1	Protein Homology	CDS	42996	43631	.	-	0	ID=cds-WP_000829025.1;Parent=gene-C9E97_RS07055;Dbxref=GenBank:WP_000829025.1;Name=WP_000829025.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462915.1;locus_tag=C9E97_RS07055;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_000829025.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	43628	44530	.	-	.	ID=gene-C9E97_RS07060;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=C9E97_RS07060;old_locus_tag=C9E97_07235
NZ_PYKA01000048.1	Protein Homology	CDS	43628	44530	.	-	0	ID=cds-WP_000331361.1;Parent=gene-C9E97_RS07060;Dbxref=GenBank:WP_000331361.1;Name=WP_000331361.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462916.1;locus_tag=C9E97_RS07060;product=formate dehydrogenase subunit beta;protein_id=WP_000331361.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	44543	47593	.	-	.	ID=gene-C9E97_RS07065;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=C9E97_RS07065;old_locus_tag=C9E97_07240
NZ_PYKA01000048.1	Protein Homology	CDS	44543	47593	.	-	0	ID=cds-WP_077248424.1;Parent=gene-C9E97_RS07065;Dbxref=GenBank:WP_077248424.1;Name=WP_077248424.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=C9E97_RS07065;product=formate dehydrogenase-N subunit alpha;protein_id=WP_077248424.1;transl_except=(pos:complement(47006..47008)%2Caa:Sec);transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	47788	48624	.	+	.	ID=gene-C9E97_RS07070;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=C9E97_RS07070;old_locus_tag=C9E97_07245
NZ_PYKA01000048.1	Protein Homology	CDS	47788	48624	.	+	0	ID=cds-WP_001059744.1;Parent=gene-C9E97_RS07070;Dbxref=GenBank:WP_001059744.1;Name=WP_001059744.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462918.1;locus_tag=C9E97_RS07070;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_001059744.1;transl_table=11
NZ_PYKA01000048.1	RefSeq	gene	48900	49931	.	-	.	ID=gene-C9E97_RS07075;Name=C9E97_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07075;old_locus_tag=C9E97_07250
NZ_PYKA01000048.1	Protein Homology	CDS	48900	49931	.	-	0	ID=cds-WP_000710967.1;Parent=gene-C9E97_RS07075;Dbxref=GenBank:WP_000710967.1;Name=WP_000710967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462919.1;locus_tag=C9E97_RS07075;product=YiiG family protein;protein_id=WP_000710967.1;transl_table=11
##sequence-region NZ_PYKA01000071.1 1 48734
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000071.1	RefSeq	region	1	48734	.	+	.	ID=NZ_PYKA01000071.1:1..48734;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000071.1	RefSeq	gene	323	2284	.	-	.	ID=gene-C9E97_RS10530;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=C9E97_RS10530;old_locus_tag=C9E97_10770
NZ_PYKA01000071.1	Protein Homology	CDS	323	2284	.	-	0	ID=cds-WP_023197974.1;Parent=gene-C9E97_RS10530;Dbxref=GenBank:WP_023197974.1;Name=WP_023197974.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461414.1;locus_tag=C9E97_RS10530;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_023197974.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	2470	4170	.	+	.	ID=gene-C9E97_RS10535;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=C9E97_RS10535;old_locus_tag=C9E97_10780
NZ_PYKA01000071.1	Protein Homology	CDS	2470	4170	.	+	0	ID=cds-WP_135369678.1;Parent=gene-C9E97_RS10535;Dbxref=GenBank:WP_135369678.1;Name=WP_135369678.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461415.1;locus_tag=C9E97_RS10535;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_135369678.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	4355	7468	.	+	.	ID=gene-C9E97_RS10540;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=C9E97_RS10540;old_locus_tag=C9E97_10785
NZ_PYKA01000071.1	Protein Homology	CDS	4355	7468	.	+	0	ID=cds-WP_135369677.1;Parent=gene-C9E97_RS10540;Dbxref=GenBank:WP_135369677.1;Name=WP_135369677.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461416.1;locus_tag=C9E97_RS10540;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_135369677.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	7570	7629	.	-	.	ID=gene-C9E97_RS10545;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=C9E97_RS10545;old_locus_tag=C9E97_10790
NZ_PYKA01000071.1	Protein Homology	CDS	7570	7629	.	-	0	ID=cds-WP_001386977.1;Parent=gene-C9E97_RS10545;Dbxref=GenBank:WP_001386977.1;Name=WP_001386977.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=C9E97_RS10545;product=protein YpfM;protein_id=WP_001386977.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	8042	8398	.	+	.	ID=gene-C9E97_RS10550;Name=C9E97_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10550;old_locus_tag=C9E97_10795
NZ_PYKA01000071.1	Protein Homology	CDS	8042	8398	.	+	0	ID=cds-WP_000631923.1;Parent=gene-C9E97_RS10550;Dbxref=GenBank:WP_000631923.1;Name=WP_000631923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461417.1;locus_tag=C9E97_RS10550;product=ArsC family reductase;protein_id=WP_000631923.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	8402	9529	.	+	.	ID=gene-C9E97_RS10555;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=C9E97_RS10555;old_locus_tag=C9E97_10800
NZ_PYKA01000071.1	Protein Homology	CDS	8402	9529	.	+	0	ID=cds-WP_001277825.1;Parent=gene-C9E97_RS10555;Dbxref=GenBank:WP_001277825.1;Name=WP_001277825.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=C9E97_RS10555;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_001277825.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	9557	9757	.	+	.	ID=gene-C9E97_RS10560;Name=C9E97_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10560;old_locus_tag=C9E97_10805
NZ_PYKA01000071.1	Protein Homology	CDS	9557	9757	.	+	0	ID=cds-WP_000383839.1;Parent=gene-C9E97_RS10560;Dbxref=GenBank:WP_000383839.1;Name=WP_000383839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461419.1;locus_tag=C9E97_RS10560;product=YpfN family protein;protein_id=WP_000383839.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	9784	11802	.	-	.	ID=gene-C9E97_RS10565;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=C9E97_RS10565;old_locus_tag=C9E97_10810
NZ_PYKA01000071.1	Protein Homology	CDS	9784	11802	.	-	0	ID=cds-WP_135369676.1;Parent=gene-C9E97_RS10565;Dbxref=GenBank:WP_135369676.1;Name=WP_135369676.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461420.1;locus_tag=C9E97_RS10565;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WP_135369676.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	11818	12681	.	-	.	ID=gene-C9E97_RS10570;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=C9E97_RS10570;old_locus_tag=C9E97_10815
NZ_PYKA01000071.1	Protein Homology	CDS	11818	12681	.	-	0	ID=cds-WP_001267523.1;Parent=gene-C9E97_RS10570;Dbxref=GenBank:WP_001267523.1;Name=WP_001267523.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461421.1;locus_tag=C9E97_RS10570;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_001267523.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	12812	13525	.	-	.	ID=gene-C9E97_RS10575;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=C9E97_RS10575;old_locus_tag=C9E97_10820
NZ_PYKA01000071.1	Protein Homology	CDS	12812	13525	.	-	0	ID=cds-WP_001171630.1;Parent=gene-C9E97_RS10575;Dbxref=GenBank:WP_001171630.1;Name=WP_001171630.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=C9E97_RS10575;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001171630.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	13700	14734	.	-	.	ID=gene-C9E97_RS10580;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=C9E97_RS10580;old_locus_tag=C9E97_10825
NZ_PYKA01000071.1	Protein Homology	CDS	13700	14734	.	-	0	ID=cds-WP_000331877.1;Parent=gene-C9E97_RS10580;Dbxref=GenBank:WP_000331877.1;Name=WP_000331877.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461423.1;locus_tag=C9E97_RS10580;product=outer membrane protein assembly factor BamC;protein_id=WP_000331877.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	14751	15629	.	-	.	ID=gene-C9E97_RS10585;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=C9E97_RS10585;old_locus_tag=C9E97_10830
NZ_PYKA01000071.1	Protein Homology	CDS	14751	15629	.	-	0	ID=cds-WP_135369675.1;Parent=gene-C9E97_RS10585;Dbxref=GenBank:WP_135369675.1;Name=WP_135369675.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=C9E97_RS10585;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_135369675.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	15775	16347	.	+	.	ID=gene-C9E97_RS10590;Name=C9E97_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10590;old_locus_tag=C9E97_10835
NZ_PYKA01000071.1	Protein Homology	CDS	15775	16347	.	+	0	ID=cds-WP_000189061.1;Parent=gene-C9E97_RS10590;Dbxref=GenBank:WP_000189061.1;Name=WP_000189061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=C9E97_RS10590;product=glycine cleavage system transcriptional repressor;protein_id=WP_000189061.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	16347	16817	.	+	.	ID=gene-C9E97_RS10595;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=C9E97_RS10595;old_locus_tag=C9E97_10840
NZ_PYKA01000071.1	Protein Homology	CDS	16347	16817	.	+	0	ID=cds-WP_001068686.1;Parent=gene-C9E97_RS10595;Dbxref=GenBank:WP_001068686.1;Name=WP_001068686.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461426.1;locus_tag=C9E97_RS10595;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001068686.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	16864	18003	.	-	.	ID=gene-C9E97_RS10600;Name=C9E97_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10600;old_locus_tag=C9E97_10845
NZ_PYKA01000071.1	Protein Homology	CDS	16864	18003	.	-	0	ID=cds-WP_135369674.1;Parent=gene-C9E97_RS10600;Dbxref=GenBank:WP_135369674.1;Name=WP_135369674.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000706371.1;locus_tag=C9E97_RS10600;product=glycerate kinase;protein_id=WP_135369674.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	18009	19277	.	-	.	ID=gene-C9E97_RS10605;Name=C9E97_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10605;old_locus_tag=C9E97_10850
NZ_PYKA01000071.1	Protein Homology	CDS	18009	19277	.	-	0	ID=cds-WP_000200859.1;Parent=gene-C9E97_RS10605;Dbxref=GenBank:WP_000200859.1;Name=WP_000200859.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090684.1;locus_tag=C9E97_RS10605;product=GntP family permease;protein_id=WP_000200859.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	19345	20532	.	-	.	ID=gene-C9E97_RS10610;Name=C9E97_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10610;old_locus_tag=C9E97_10855
NZ_PYKA01000071.1	Protein Homology	CDS	19345	20532	.	-	0	ID=cds-WP_135369673.1;Parent=gene-C9E97_RS10610;Dbxref=GenBank:WP_135369673.1;Name=WP_135369673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667973.1;locus_tag=C9E97_RS10610;product=sugar diacid recognition domain-containing protein;protein_id=WP_135369673.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	20808	21875	.	-	.	ID=gene-C9E97_RS10615;Name=C9E97_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10615;old_locus_tag=C9E97_10860
NZ_PYKA01000071.1	Protein Homology	CDS	20808	21875	.	-	0	ID=cds-WP_000892056.1;Parent=gene-C9E97_RS10615;Dbxref=GenBank:WP_000892056.1;Name=WP_000892056.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461428.1;locus_tag=C9E97_RS10615;product=AI-2E family transporter;protein_id=WP_000892056.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	22083	23546	.	+	.	ID=gene-C9E97_RS10620;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=C9E97_RS10620;old_locus_tag=C9E97_10865
NZ_PYKA01000071.1	Protein Homology	CDS	22083	23546	.	+	0	ID=cds-WP_000489630.1;Parent=gene-C9E97_RS10620;Dbxref=GenBank:WP_000489630.1;Name=WP_000489630.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461429.1;locus_tag=C9E97_RS10620;product=beta-barrel assembly-enhancing protease;protein_id=WP_000489630.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	23586	23945	.	+	.	ID=gene-C9E97_RS10625;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=C9E97_RS10625;old_locus_tag=C9E97_10870
NZ_PYKA01000071.1	Protein Homology	CDS	23586	23945	.	+	0	ID=cds-WP_000132650.1;Parent=gene-C9E97_RS10625;Dbxref=GenBank:WP_000132650.1;Name=WP_000132650.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461430.1;locus_tag=C9E97_RS10625;product=arsenate reductase (glutaredoxin);protein_id=WP_000132650.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	23972	24673	.	-	.	ID=gene-C9E97_RS10630;Name=C9E97_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10630;old_locus_tag=C9E97_10875
NZ_PYKA01000071.1	Protein Homology	CDS	23972	24673	.	-	0	ID=cds-WP_061835882.1;Parent=gene-C9E97_RS10630;Dbxref=GenBank:WP_061835882.1;Name=WP_061835882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=C9E97_RS10630;product=DnaA inactivator Hda;protein_id=WP_061835882.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	24768	26057	.	-	.	ID=gene-C9E97_RS10635;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=C9E97_RS10635;old_locus_tag=C9E97_10880
NZ_PYKA01000071.1	Protein Homology	CDS	24768	26057	.	-	0	ID=cds-WP_000198345.1;Parent=gene-C9E97_RS10635;Dbxref=GenBank:WP_000198345.1;Name=WP_000198345.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461432.1;locus_tag=C9E97_RS10635;product=uracil permease;protein_id=WP_000198345.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	26145	26771	.	-	.	ID=gene-C9E97_RS10640;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=C9E97_RS10640;old_locus_tag=C9E97_10885
NZ_PYKA01000071.1	Protein Homology	CDS	26145	26771	.	-	0	ID=cds-WP_000706208.1;Parent=gene-C9E97_RS10640;Dbxref=GenBank:WP_000706208.1;Name=WP_000706208.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=C9E97_RS10640;product=uracil phosphoribosyltransferase;protein_id=WP_000706208.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	27184	28221	.	+	.	ID=gene-C9E97_RS10645;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=C9E97_RS10645;old_locus_tag=C9E97_10890
NZ_PYKA01000071.1	Protein Homology	CDS	27184	28221	.	+	0	ID=cds-WP_000130477.1;Parent=gene-C9E97_RS10645;Dbxref=GenBank:WP_000130477.1;Name=WP_000130477.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656828.1;locus_tag=C9E97_RS10645;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_000130477.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	28221	28859	.	+	.	ID=gene-C9E97_RS10650;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=C9E97_RS10650;old_locus_tag=C9E97_10895
NZ_PYKA01000071.1	Protein Homology	CDS	28221	28859	.	+	0	ID=cds-WP_001028589.1;Parent=gene-C9E97_RS10650;Dbxref=GenBank:WP_001028589.1;Name=WP_001028589.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461435.1;locus_tag=C9E97_RS10650;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_001028589.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	29048	31114	.	+	.	ID=gene-C9E97_RS10655;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=C9E97_RS10655;old_locus_tag=C9E97_10900
NZ_PYKA01000071.1	Protein Homology	CDS	29048	31114	.	+	0	ID=cds-WP_000529555.1;Parent=gene-C9E97_RS10655;Dbxref=GenBank:WP_000529555.1;Name=WP_000529555.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461436.1;locus_tag=C9E97_RS10655;product=polyphosphate kinase 1;protein_id=WP_000529555.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	31119	32660	.	+	.	ID=gene-C9E97_RS10660;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=C9E97_RS10660;old_locus_tag=C9E97_10905
NZ_PYKA01000071.1	Protein Homology	CDS	31119	32660	.	+	0	ID=cds-WP_001123330.1;Parent=gene-C9E97_RS10660;Dbxref=GenBank:WP_001123330.1;Name=WP_001123330.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461437.1;locus_tag=C9E97_RS10660;product=exopolyphosphatase;protein_id=WP_001123330.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	32696	34909	.	-	.	ID=gene-C9E97_RS10665;Name=C9E97_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10665;old_locus_tag=C9E97_10910
NZ_PYKA01000071.1	Protein Homology	CDS	32696	34909	.	-	0	ID=cds-WP_000773647.1;Parent=gene-C9E97_RS10665;Dbxref=GenBank:WP_000773647.1;Name=WP_000773647.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461438.1;locus_tag=C9E97_RS10665;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_000773647.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	35006	35143	.	-	.	ID=gene-C9E97_RS10670;Name=C9E97_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10670;old_locus_tag=C9E97_10915
NZ_PYKA01000071.1	Protein Homology	CDS	35006	35143	.	-	0	ID=cds-WP_001540598.1;Parent=gene-C9E97_RS10670;Dbxref=GenBank:WP_001540598.1;Name=WP_001540598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448898.1;locus_tag=C9E97_RS10670;product=hypothetical protein;protein_id=WP_001540598.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	35322	35513	.	+	.	ID=gene-C9E97_RS10675;Name=C9E97_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10675;old_locus_tag=C9E97_10920
NZ_PYKA01000071.1	Protein Homology	CDS	35322	35513	.	+	0	ID=cds-WP_000075924.1;Parent=gene-C9E97_RS10675;Dbxref=GenBank:WP_000075924.1;Name=WP_000075924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461441.1;locus_tag=C9E97_RS10675;product=YfgG family protein;protein_id=WP_000075924.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	35751	36269	.	+	.	ID=gene-C9E97_RS10680;Name=C9E97_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10680;old_locus_tag=C9E97_10925
NZ_PYKA01000071.1	Protein Homology	CDS	35751	36269	.	+	0	ID=cds-WP_023136450.1;Parent=gene-C9E97_RS10680;Dbxref=GenBank:WP_023136450.1;Name=WP_023136450.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417000.1;locus_tag=C9E97_RS10680;product=glycine zipper 2TM domain-containing protein;protein_id=WP_023136450.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	36285	36824	.	+	.	ID=gene-C9E97_RS10685;Name=C9E97_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10685;old_locus_tag=C9E97_10930
NZ_PYKA01000071.1	Protein Homology	CDS	36285	36824	.	+	0	ID=cds-WP_000755800.1;Parent=gene-C9E97_RS10685;Dbxref=GenBank:WP_000755800.1;Name=WP_000755800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000755162.1;locus_tag=C9E97_RS10685;product=DUF5384 family protein;protein_id=WP_000755800.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	pseudogene	36990	37133	.	-	.	ID=gene-C9E97_RS23745;Name=C9E97_RS23745;end_range=37133,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23745;partial=true;pseudo=true
NZ_PYKA01000071.1	Protein Homology	CDS	36990	37133	.	-	0	ID=cds-C9E97_RS23745;Parent=gene-C9E97_RS23745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=37133,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448901.1;locus_tag=C9E97_RS23745;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	37064	37381	.	-	.	ID=gene-C9E97_RS23750;Name=C9E97_RS23750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23750
NZ_PYKA01000071.1	GeneMarkS-2+	CDS	37064	37381	.	-	0	ID=cds-WP_023139824.1;Parent=gene-C9E97_RS23750;Dbxref=GenBank:WP_023139824.1;Name=WP_023139824.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E97_RS23750;product=hypothetical protein;protein_id=WP_023139824.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	37385	37540	.	-	.	ID=gene-C9E97_RS23465;Name=C9E97_RS23465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23465
NZ_PYKA01000071.1	Protein Homology	CDS	37385	37540	.	-	0	ID=cds-WP_000568804.1;Parent=gene-C9E97_RS23465;Dbxref=GenBank:WP_000568804.1;Name=WP_000568804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568804.1;locus_tag=C9E97_RS23465;product=hypothetical protein;protein_id=WP_000568804.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	37624	38661	.	+	.	ID=gene-C9E97_RS10695;Name=C9E97_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10695;old_locus_tag=C9E97_10940
NZ_PYKA01000071.1	Protein Homology	CDS	37624	38661	.	+	0	ID=cds-WP_017441380.1;Parent=gene-C9E97_RS10695;Dbxref=GenBank:WP_017441380.1;Name=WP_017441380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441380.1;locus_tag=C9E97_RS10695;product=hypothetical protein;protein_id=WP_017441380.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	pseudogene	38712	38879	.	+	.	ID=gene-C9E97_RS10700;Name=C9E97_RS10700;end_range=38879,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS10700;old_locus_tag=C9E97_10945;partial=true;pseudo=true
NZ_PYKA01000071.1	Protein Homology	CDS	38712	38879	.	+	0	ID=cds-C9E97_RS10700;Parent=gene-C9E97_RS10700;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=38879,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014593494.1;locus_tag=C9E97_RS10700;partial=true;product=integrase;pseudo=true;transl_table=11
NZ_PYKA01000071.1	RefSeq	pseudogene	38978	39331	.	+	.	ID=gene-C9E97_RS10705;Name=C9E97_RS10705;end_range=39331,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS10705;old_locus_tag=C9E97_10950;partial=true;pseudo=true;start_range=.,38978
NZ_PYKA01000071.1	Protein Homology	CDS	38978	39331	.	+	0	ID=cds-C9E97_RS10705;Parent=gene-C9E97_RS10705;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=39331,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=C9E97_RS10705;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,38978;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	39454	39915	.	+	.	ID=gene-C9E97_RS23985;Name=C9E97_RS23985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23985
NZ_PYKA01000071.1	Protein Homology	CDS	39454	39915	.	+	0	ID=cds-WP_346763479.1;Parent=gene-C9E97_RS23985;Dbxref=GenBank:WP_346763479.1;Name=WP_346763479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_154057295.1;locus_tag=C9E97_RS23985;product=STM2901 family protein;protein_id=WP_346763479.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	39900	40229	.	+	.	ID=gene-C9E97_RS10715;Name=C9E97_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10715;old_locus_tag=C9E97_10960
NZ_PYKA01000071.1	Protein Homology	CDS	39900	40229	.	+	0	ID=cds-WP_135369144.1;Parent=gene-C9E97_RS10715;Dbxref=GenBank:WP_135369144.1;Name=WP_135369144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461443.1;locus_tag=C9E97_RS10715;product=DUF1493 family protein;protein_id=WP_135369144.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	pseudogene	40306	40623	.	-	.	ID=gene-C9E97_RS10720;Name=C9E97_RS10720;end_range=40623,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS10720;old_locus_tag=C9E97_10965;partial=true;pseudo=true;start_range=.,40306
NZ_PYKA01000071.1	Protein Homology	CDS	40306	40623	.	-	0	ID=cds-C9E97_RS10720;Parent=gene-C9E97_RS10720;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=40623,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611385.1;locus_tag=C9E97_RS10720;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,40306;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	40759	42336	.	-	.	ID=gene-C9E97_RS10725;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=C9E97_RS10725;old_locus_tag=C9E97_10970
NZ_PYKA01000071.1	Protein Homology	CDS	40759	42336	.	-	0	ID=cds-WP_000138293.1;Parent=gene-C9E97_RS10725;Dbxref=GenBank:WP_000138293.1;Name=WP_000138293.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=C9E97_RS10725;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000138293.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	42406	43872	.	-	.	ID=gene-C9E97_RS10730;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=C9E97_RS10730;old_locus_tag=C9E97_10975
NZ_PYKA01000071.1	Protein Homology	CDS	42406	43872	.	-	0	ID=cds-WP_000944174.1;Parent=gene-C9E97_RS10730;Dbxref=GenBank:WP_000944174.1;Name=WP_000944174.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=C9E97_RS10730;product=IMP dehydrogenase;protein_id=WP_000944174.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	44033	45382	.	+	.	ID=gene-C9E97_RS10735;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=C9E97_RS10735;old_locus_tag=C9E97_10980
NZ_PYKA01000071.1	Protein Homology	CDS	44033	45382	.	+	0	ID=cds-WP_000953168.1;Parent=gene-C9E97_RS10735;Dbxref=GenBank:WP_000953168.1;Name=WP_000953168.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461447.1;locus_tag=C9E97_RS10735;product=exodeoxyribonuclease VII large subunit;protein_id=WP_000953168.1;transl_table=11
NZ_PYKA01000071.1	RefSeq	gene	45544	48734	.	-	.	ID=gene-C9E97_RS10740;Name=shdA;end_range=48734,.;gbkey=Gene;gene=shdA;gene_biotype=protein_coding;locus_tag=C9E97_RS10740;old_locus_tag=C9E97_10985;partial=true
NZ_PYKA01000071.1	Protein Homology	CDS	45544	48734	.	-	2	ID=cds-WP_135495719.1;Parent=gene-C9E97_RS10740;Dbxref=GenBank:WP_135495719.1;Name=WP_135495719.1;Ontology_term=GO:0019867;end_range=48734,.;gbkey=CDS;gene=shdA;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835061.1;locus_tag=C9E97_RS10740;partial=true;product=fibronectin-binding autotransporter adhesin ShdA;protein_id=WP_135495719.1;transl_table=11
##sequence-region NZ_PYKA01000022.1 1 46899
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000022.1	RefSeq	region	1	46899	.	+	.	ID=NZ_PYKA01000022.1:1..46899;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000022.1	RefSeq	gene	258	1355	.	+	.	ID=gene-C9E97_RS02455;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=C9E97_RS02455;old_locus_tag=C9E97_02540
NZ_PYKA01000022.1	Protein Homology	CDS	258	1355	.	+	0	ID=cds-WP_000678626.1;Parent=gene-C9E97_RS02455;Dbxref=GenBank:WP_000678626.1;Name=WP_000678626.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=C9E97_RS02455;product=murein transglycosylase A;protein_id=WP_000678626.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	1465	2271	.	+	.	ID=gene-C9E97_RS02460;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=C9E97_RS02460;old_locus_tag=C9E97_02545
NZ_PYKA01000022.1	Protein Homology	CDS	1465	2271	.	+	0	ID=cds-WP_000117748.1;Parent=gene-C9E97_RS02460;Dbxref=GenBank:WP_000117748.1;Name=WP_000117748.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461906.1;locus_tag=C9E97_RS02460;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_000117748.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	2323	3210	.	-	.	ID=gene-C9E97_RS02465;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=C9E97_RS02465;old_locus_tag=C9E97_02550
NZ_PYKA01000022.1	Protein Homology	CDS	2323	3210	.	-	0	ID=cds-WP_135369239.1;Parent=gene-C9E97_RS02465;Dbxref=GenBank:WP_135369239.1;Name=WP_135369239.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461905.3;locus_tag=C9E97_RS02465;product=EamA family transporter RarD;protein_id=WP_135369239.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	3510	3953	.	-	.	ID=gene-C9E97_RS02470;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=C9E97_RS02470;old_locus_tag=C9E97_02555
NZ_PYKA01000022.1	Protein Homology	CDS	3510	3953	.	-	0	ID=cds-WP_000184198.1;Parent=gene-C9E97_RS02470;Dbxref=GenBank:WP_000184198.1;Name=WP_000184198.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461904.1;locus_tag=C9E97_RS02470;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_000184198.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	3953	5158	.	-	.	ID=gene-C9E97_RS02475;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=C9E97_RS02475;old_locus_tag=C9E97_02560
NZ_PYKA01000022.1	Protein Homology	CDS	3953	5158	.	-	0	ID=cds-WP_000991053.1;Parent=gene-C9E97_RS02475;Dbxref=GenBank:WP_000991053.1;Name=WP_000991053.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461903.1;locus_tag=C9E97_RS02475;product=cysteine desulfurase CsdA;protein_id=WP_000991053.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	5351	5578	.	+	.	ID=gene-C9E97_RS02480;Name=C9E97_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02480;old_locus_tag=C9E97_02565
NZ_PYKA01000022.1	Protein Homology	CDS	5351	5578	.	+	0	ID=cds-WP_000750393.1;Parent=gene-C9E97_RS02480;Dbxref=GenBank:WP_000750393.1;Name=WP_000750393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461902.1;locus_tag=C9E97_RS02480;product=YgdI/YgdR family lipoprotein;protein_id=WP_000750393.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	5925	6842	.	+	.	ID=gene-C9E97_RS02485;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=C9E97_RS02485;old_locus_tag=C9E97_02570
NZ_PYKA01000022.1	Protein Homology	CDS	5925	6842	.	+	0	ID=cds-WP_000044409.1;Parent=gene-C9E97_RS02485;Dbxref=GenBank:WP_000044409.1;Name=WP_000044409.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=C9E97_RS02485;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_000044409.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	6861	7256	.	+	.	ID=gene-C9E97_RS02490;Name=C9E97_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02490;old_locus_tag=C9E97_02575
NZ_PYKA01000022.1	Protein Homology	CDS	6861	7256	.	+	0	ID=cds-WP_000203913.1;Parent=gene-C9E97_RS02490;Dbxref=GenBank:WP_000203913.1;Name=WP_000203913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461900.1;locus_tag=C9E97_RS02490;product=DUF423 domain-containing protein;protein_id=WP_000203913.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	7249	8349	.	+	.	ID=gene-C9E97_RS02495;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=C9E97_RS02495;old_locus_tag=C9E97_02580
NZ_PYKA01000022.1	Protein Homology	CDS	7249	8349	.	+	0	ID=cds-WP_001045497.1;Parent=gene-C9E97_RS02495;Dbxref=GenBank:WP_001045497.1;Name=WP_001045497.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=C9E97_RS02495;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_001045497.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	8408	9118	.	-	.	ID=gene-C9E97_RS02500;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=C9E97_RS02500;old_locus_tag=C9E97_02585
NZ_PYKA01000022.1	Protein Homology	CDS	8408	9118	.	-	0	ID=cds-WP_000642330.1;Parent=gene-C9E97_RS02500;Dbxref=GenBank:WP_000642330.1;Name=WP_000642330.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461898.1;locus_tag=C9E97_RS02500;product=L-fucose operon activator;protein_id=WP_000642330.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	9176	9598	.	-	.	ID=gene-C9E97_RS02505;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=C9E97_RS02505;old_locus_tag=C9E97_02590
NZ_PYKA01000022.1	Protein Homology	CDS	9176	9598	.	-	0	ID=cds-WP_000920848.1;Parent=gene-C9E97_RS02505;Dbxref=GenBank:WP_000920848.1;Name=WP_000920848.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461897.1;locus_tag=C9E97_RS02505;product=L-fucose mutarotase;protein_id=WP_000920848.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	9600	11018	.	-	.	ID=gene-C9E97_RS02510;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=C9E97_RS02510;old_locus_tag=C9E97_02595
NZ_PYKA01000022.1	Protein Homology	CDS	9600	11018	.	-	0	ID=cds-WP_000806780.1;Parent=gene-C9E97_RS02510;Dbxref=GenBank:WP_000806780.1;Name=WP_000806780.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461896.1;locus_tag=C9E97_RS02510;product=L-fuculokinase;protein_id=WP_000806780.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	11119	12894	.	-	.	ID=gene-C9E97_RS02515;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=C9E97_RS02515;old_locus_tag=C9E97_02600
NZ_PYKA01000022.1	Protein Homology	CDS	11119	12894	.	-	0	ID=cds-WP_000724126.1;Parent=gene-C9E97_RS02515;Dbxref=GenBank:WP_000724126.1;Name=WP_000724126.1;Ontology_term=GO:0019317,GO:0008736,GO:0030145,GO:0005737;gbkey=CDS;gene=fucI;go_component=cytoplasm|0005737||IEA;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461895.1;locus_tag=C9E97_RS02515;product=L-fucose isomerase;protein_id=WP_000724126.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	12926	14242	.	-	.	ID=gene-C9E97_RS02520;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=C9E97_RS02520;old_locus_tag=C9E97_02605
NZ_PYKA01000022.1	Protein Homology	CDS	12926	14242	.	-	0	ID=cds-WP_000528625.1;Parent=gene-C9E97_RS02520;Dbxref=GenBank:WP_000528625.1;Name=WP_000528625.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=C9E97_RS02520;product=L-fucose:H+ symporter permease;protein_id=WP_000528625.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	14798	15445	.	+	.	ID=gene-C9E97_RS02525;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=C9E97_RS02525;old_locus_tag=C9E97_02610
NZ_PYKA01000022.1	Protein Homology	CDS	14798	15445	.	+	0	ID=cds-WP_000440819.1;Parent=gene-C9E97_RS02525;Dbxref=GenBank:WP_000440819.1;Name=WP_000440819.1;Ontology_term=GO:0006004,GO:0008270,GO:0008738;gbkey=CDS;gene=fucA;go_function=zinc ion binding|0008270||IEA,L-fuculose-phosphate aldolase activity|0008738||IEA;go_process=fucose metabolic process|0006004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461894.1;locus_tag=C9E97_RS02525;product=L-fuculose-phosphate aldolase;protein_id=WP_000440819.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	15462	16610	.	+	.	ID=gene-C9E97_RS02530;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=C9E97_RS02530;old_locus_tag=C9E97_02615
NZ_PYKA01000022.1	Protein Homology	CDS	15462	16610	.	+	0	ID=cds-WP_000013565.1;Parent=gene-C9E97_RS02530;Dbxref=GenBank:WP_000013565.1;Name=WP_000013565.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461893.1;locus_tag=C9E97_RS02530;product=lactaldehyde reductase;protein_id=WP_000013565.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	16702	17457	.	-	.	ID=gene-C9E97_RS02535;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=C9E97_RS02535;old_locus_tag=C9E97_02620
NZ_PYKA01000022.1	Protein Homology	CDS	16702	17457	.	-	0	ID=cds-WP_167850430.1;Parent=gene-C9E97_RS02535;Dbxref=GenBank:WP_167850430.1;Name=WP_167850430.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=C9E97_RS02535;product=flap endonuclease Xni;protein_id=WP_167850430.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	17628	18995	.	-	.	ID=gene-C9E97_RS02545;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=C9E97_RS02545;old_locus_tag=C9E97_02630
NZ_PYKA01000022.1	Protein Homology	CDS	17628	18995	.	-	0	ID=cds-WP_000626384.1;Parent=gene-C9E97_RS02545;Dbxref=GenBank:WP_000626384.1;Name=WP_000626384.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461891.2;locus_tag=C9E97_RS02545;product=L-serine ammonia-lyase II;protein_id=WP_000626384.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	19054	20343	.	-	.	ID=gene-C9E97_RS02550;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=C9E97_RS02550;old_locus_tag=C9E97_02635
NZ_PYKA01000022.1	Protein Homology	CDS	19054	20343	.	-	0	ID=cds-WP_000450462.1;Parent=gene-C9E97_RS02550;Dbxref=GenBank:WP_000450462.1;Name=WP_000450462.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461890.1;locus_tag=C9E97_RS02550;product=HAAAP family serine/threonine permease SdaC;protein_id=WP_000450462.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	20908	22272	.	-	.	ID=gene-C9E97_RS02555;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=C9E97_RS02555;old_locus_tag=C9E97_02640
NZ_PYKA01000022.1	Protein Homology	CDS	20908	22272	.	-	0	ID=cds-WP_000627973.1;Parent=gene-C9E97_RS02555;Dbxref=GenBank:WP_000627973.1;Name=WP_000627973.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461889.1;locus_tag=C9E97_RS02555;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_000627973.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	22385	23233	.	-	.	ID=gene-C9E97_RS02560;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=C9E97_RS02560;old_locus_tag=C9E97_02645
NZ_PYKA01000022.1	Protein Homology	CDS	22385	23233	.	-	0	ID=cds-WP_115408978.1;Parent=gene-C9E97_RS02560;Dbxref=GenBank:WP_115408978.1;Name=WP_115408978.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461888.1;locus_tag=C9E97_RS02560;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_115408978.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	23302	23847	.	+	.	ID=gene-C9E97_RS02565;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=C9E97_RS02565;old_locus_tag=C9E97_02650
NZ_PYKA01000022.1	Protein Homology	CDS	23302	23847	.	+	0	ID=cds-WP_000343990.1;Parent=gene-C9E97_RS02565;Dbxref=GenBank:WP_000343990.1;Name=WP_000343990.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461887.1;locus_tag=C9E97_RS02565;product=SecY-interacting protein;protein_id=WP_000343990.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	24459	24788	.	+	.	ID=gene-C9E97_RS02575;Name=C9E97_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02575;old_locus_tag=C9E97_02660
NZ_PYKA01000022.1	Protein Homology	CDS	24459	24788	.	+	0	ID=cds-WP_001804977.1;Parent=gene-C9E97_RS02575;Dbxref=GenBank:WP_001804977.1;Name=WP_001804977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461886.1;locus_tag=C9E97_RS02575;product=YqcC family protein;protein_id=WP_001804977.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	24788	25570	.	+	.	ID=gene-C9E97_RS02580;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=C9E97_RS02580;old_locus_tag=C9E97_02665
NZ_PYKA01000022.1	Protein Homology	CDS	24788	25570	.	+	0	ID=cds-WP_000890030.1;Parent=gene-C9E97_RS02580;Dbxref=GenBank:WP_000890030.1;Name=WP_000890030.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001715016.1;locus_tag=C9E97_RS02580;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_000890030.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	25589	26038	.	+	.	ID=gene-C9E97_RS02585;Name=C9E97_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02585;old_locus_tag=C9E97_02670
NZ_PYKA01000022.1	Protein Homology	CDS	25589	26038	.	+	0	ID=cds-WP_000807731.1;Parent=gene-C9E97_RS02585;Dbxref=GenBank:WP_000807731.1;Name=WP_000807731.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461884.1;locus_tag=C9E97_RS02585;product=flavodoxin;protein_id=WP_000807731.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	26188	26436	.	-	.	ID=gene-C9E97_RS02590;Name=C9E97_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02590;old_locus_tag=C9E97_02675
NZ_PYKA01000022.1	GeneMarkS-2+	CDS	26188	26436	.	-	0	ID=cds-WP_001531815.1;Parent=gene-C9E97_RS02590;Dbxref=GenBank:WP_001531815.1;Name=WP_001531815.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E97_RS02590;product=hypothetical protein;protein_id=WP_001531815.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	26519	27877	.	+	.	ID=gene-C9E97_RS02595;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=C9E97_RS02595;old_locus_tag=C9E97_02680
NZ_PYKA01000022.1	Protein Homology	CDS	26519	27877	.	+	0	ID=cds-WP_000097015.1;Parent=gene-C9E97_RS02595;Dbxref=GenBank:WP_000097015.1;Name=WP_000097015.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461883.1;locus_tag=C9E97_RS02595;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_000097015.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	27874	29214	.	+	.	ID=gene-C9E97_RS02600;Name=C9E97_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02600;old_locus_tag=C9E97_02685
NZ_PYKA01000022.1	Protein Homology	CDS	27874	29214	.	+	0	ID=cds-WP_135369242.1;Parent=gene-C9E97_RS02600;Dbxref=GenBank:WP_135369242.1;Name=WP_135369242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461882.1;locus_tag=C9E97_RS02600;product=enolase C-terminal domain-like protein;protein_id=WP_135369242.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	29235	30575	.	+	.	ID=gene-C9E97_RS02605;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=C9E97_RS02605;old_locus_tag=C9E97_02690
NZ_PYKA01000022.1	Protein Homology	CDS	29235	30575	.	+	0	ID=cds-WP_000107113.1;Parent=gene-C9E97_RS02605;Dbxref=GenBank:WP_000107113.1;Name=WP_000107113.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=C9E97_RS02605;product=glucarate dehydratase;protein_id=WP_000107113.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	30653	31795	.	+	.	ID=gene-C9E97_RS02610;Name=C9E97_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02610;old_locus_tag=C9E97_02695
NZ_PYKA01000022.1	Protein Homology	CDS	30653	31795	.	+	0	ID=cds-WP_000706479.1;Parent=gene-C9E97_RS02610;Dbxref=GenBank:WP_000706479.1;Name=WP_000706479.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461880.1;locus_tag=C9E97_RS02610;product=glycerate kinase;protein_id=WP_000706479.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	31839	34595	.	-	.	ID=gene-C9E97_RS02615;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=C9E97_RS02615;old_locus_tag=C9E97_02700
NZ_PYKA01000022.1	Protein Homology	CDS	31839	34595	.	-	0	ID=cds-WP_000186397.1;Parent=gene-C9E97_RS02615;Dbxref=GenBank:WP_000186397.1;Name=WP_000186397.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461879.1;locus_tag=C9E97_RS02615;product=two-component sensor histidine kinase BarA;protein_id=WP_000186397.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	34653	35948	.	+	.	ID=gene-C9E97_RS02620;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=C9E97_RS02620;old_locus_tag=C9E97_02705
NZ_PYKA01000022.1	Protein Homology	CDS	34653	35948	.	+	0	ID=cds-WP_000046856.1;Parent=gene-C9E97_RS02620;Dbxref=GenBank:WP_000046856.1;Name=WP_000046856.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461878.1;locus_tag=C9E97_RS02620;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_000046856.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	36000	38234	.	+	.	ID=gene-C9E97_RS02625;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=C9E97_RS02625;old_locus_tag=C9E97_02710
NZ_PYKA01000022.1	Protein Homology	CDS	36000	38234	.	+	0	ID=cds-WP_000226841.1;Parent=gene-C9E97_RS02625;Dbxref=GenBank:WP_000226841.1;Name=WP_000226841.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461877.1;locus_tag=C9E97_RS02625;product=GTP diphosphokinase;protein_id=WP_000226841.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	38319	38675	.	+	.	ID=gene-C9E97_RS02630;Name=C9E97_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02630;old_locus_tag=C9E97_02715
NZ_PYKA01000022.1	Protein Homology	CDS	38319	38675	.	+	0	ID=cds-WP_077942301.1;Parent=gene-C9E97_RS02630;Dbxref=GenBank:WP_077942301.1;Name=WP_077942301.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461876.3;locus_tag=C9E97_RS02630;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_077942301.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	pseudogene	38641	38760	.	+	.	ID=gene-C9E97_RS02635;Name=C9E97_RS02635;end_range=38760,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS02635;old_locus_tag=C9E97_02720;partial=true;pseudo=true
NZ_PYKA01000022.1	Protein Homology	CDS	38641	38760	.	+	0	ID=cds-C9E97_RS02635;Parent=gene-C9E97_RS02635;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0090729,GO:0110001;end_range=38760,.;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532579.1;locus_tag=C9E97_RS02635;partial=true;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	38880	39929	.	-	.	ID=gene-C9E97_RS02640;Name=C9E97_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02640;old_locus_tag=C9E97_02725
NZ_PYKA01000022.1	Protein Homology	CDS	38880	39929	.	-	0	ID=cds-WP_240776467.1;Parent=gene-C9E97_RS02640;Dbxref=GenBank:WP_240776467.1;Name=WP_240776467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662924.1;locus_tag=C9E97_RS02640;product=hypothetical protein;protein_id=WP_240776467.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	39941	41026	.	-	.	ID=gene-C9E97_RS02645;Name=C9E97_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02645;old_locus_tag=C9E97_02730
NZ_PYKA01000022.1	Protein Homology	CDS	39941	41026	.	-	0	ID=cds-WP_135369243.1;Parent=gene-C9E97_RS02645;Dbxref=GenBank:WP_135369243.1;Name=WP_135369243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001188944.1;locus_tag=C9E97_RS02645;product=hypothetical protein;protein_id=WP_135369243.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	41055	41591	.	-	.	ID=gene-C9E97_RS02650;Name=C9E97_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02650;old_locus_tag=C9E97_02735
NZ_PYKA01000022.1	Protein Homology	CDS	41055	41591	.	-	0	ID=cds-WP_020899169.1;Parent=gene-C9E97_RS02650;Dbxref=GenBank:WP_020899169.1;Name=WP_020899169.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001079648.1;locus_tag=C9E97_RS02650;product=fimbrial protein;protein_id=WP_020899169.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	41588	42058	.	-	.	ID=gene-C9E97_RS02655;Name=C9E97_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02655;old_locus_tag=C9E97_02740
NZ_PYKA01000022.1	Protein Homology	CDS	41588	42058	.	-	0	ID=cds-WP_135369244.1;Parent=gene-C9E97_RS02655;Dbxref=GenBank:WP_135369244.1;Name=WP_135369244.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006667202.1;locus_tag=C9E97_RS02655;product=fimbrial protein;protein_id=WP_135369244.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	42073	42579	.	-	.	ID=gene-C9E97_RS02660;Name=C9E97_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02660;old_locus_tag=C9E97_02745
NZ_PYKA01000022.1	Protein Homology	CDS	42073	42579	.	-	0	ID=cds-WP_000178259.1;Parent=gene-C9E97_RS02660;Dbxref=GenBank:WP_000178259.1;Name=WP_000178259.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178262.1;locus_tag=C9E97_RS02660;product=fimbrial protein;protein_id=WP_000178259.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	42599	43372	.	-	.	ID=gene-C9E97_RS02665;Name=C9E97_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02665;old_locus_tag=C9E97_02750
NZ_PYKA01000022.1	Protein Homology	CDS	42599	43372	.	-	0	ID=cds-WP_001044459.1;Parent=gene-C9E97_RS02665;Dbxref=GenBank:WP_001044459.1;Name=WP_001044459.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044456.1;locus_tag=C9E97_RS02665;product=fimbria/pilus periplasmic chaperone;protein_id=WP_001044459.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	43385	46081	.	-	.	ID=gene-C9E97_RS02670;Name=C9E97_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02670;old_locus_tag=C9E97_02755
NZ_PYKA01000022.1	Protein Homology	CDS	43385	46081	.	-	0	ID=cds-WP_254907944.1;Parent=gene-C9E97_RS02670;Dbxref=GenBank:WP_254907944.1;Name=WP_254907944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000981797.1;locus_tag=C9E97_RS02670;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_254907944.1;transl_table=11
NZ_PYKA01000022.1	RefSeq	gene	46164	46751	.	-	.	ID=gene-C9E97_RS02675;Name=C9E97_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02675;old_locus_tag=C9E97_02760
NZ_PYKA01000022.1	Protein Homology	CDS	46164	46751	.	-	0	ID=cds-WP_000842512.1;Parent=gene-C9E97_RS02675;Dbxref=GenBank:WP_000842512.1;Name=WP_000842512.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466162.1;locus_tag=C9E97_RS02675;product=fimbrial protein;protein_id=WP_000842512.1;transl_table=11
##sequence-region NZ_PYKA01000034.1 1 46750
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000034.1	RefSeq	region	1	46750	.	+	.	ID=NZ_PYKA01000034.1:1..46750;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000034.1	RefSeq	gene	242	925	.	+	.	ID=gene-C9E97_RS03890;Name=C9E97_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03890;old_locus_tag=C9E97_04005
NZ_PYKA01000034.1	Protein Homology	CDS	242	925	.	+	0	ID=cds-WP_000378721.1;Parent=gene-C9E97_RS03890;Dbxref=GenBank:WP_000378721.1;Name=WP_000378721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462932.3;locus_tag=C9E97_RS03890;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_000378721.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	1083	2390	.	-	.	ID=gene-C9E97_RS03895;Name=C9E97_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03895;old_locus_tag=C9E97_04010
NZ_PYKA01000034.1	Protein Homology	CDS	1083	2390	.	-	0	ID=cds-WP_000566800.1;Parent=gene-C9E97_RS03895;Dbxref=GenBank:WP_000566800.1;Name=WP_000566800.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462933.1;locus_tag=C9E97_RS03895;product=TRAP transporter large permease;protein_id=WP_000566800.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	2383	2898	.	-	.	ID=gene-C9E97_RS03900;Name=C9E97_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03900;old_locus_tag=C9E97_04015
NZ_PYKA01000034.1	Protein Homology	CDS	2383	2898	.	-	0	ID=cds-WP_001091413.1;Parent=gene-C9E97_RS03900;Dbxref=GenBank:WP_001091413.1;Name=WP_001091413.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462934.1;locus_tag=C9E97_RS03900;product=TRAP transporter small permease;protein_id=WP_001091413.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	2917	3900	.	-	.	ID=gene-C9E97_RS03905;Name=C9E97_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03905;old_locus_tag=C9E97_04020
NZ_PYKA01000034.1	Protein Homology	CDS	2917	3900	.	-	0	ID=cds-WP_135369581.1;Parent=gene-C9E97_RS03905;Dbxref=GenBank:WP_135369581.1;Name=WP_135369581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=C9E97_RS03905;product=TRAP transporter substrate-binding protein;protein_id=WP_135369581.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	4229	4849	.	+	.	ID=gene-C9E97_RS03910;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=C9E97_RS03910;old_locus_tag=C9E97_04025
NZ_PYKA01000034.1	Protein Homology	CDS	4229	4849	.	+	0	ID=cds-WP_000122632.1;Parent=gene-C9E97_RS03910;Dbxref=GenBank:WP_000122632.1;Name=WP_000122632.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=C9E97_RS03910;product=superoxide dismutase [Mn];protein_id=WP_000122632.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	4919	5608	.	+	.	ID=gene-C9E97_RS03915;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=C9E97_RS03915;old_locus_tag=C9E97_04030
NZ_PYKA01000034.1	Protein Homology	CDS	4919	5608	.	+	0	ID=cds-WP_000559229.1;Parent=gene-C9E97_RS03915;Dbxref=GenBank:WP_000559229.1;Name=WP_000559229.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559227.1;locus_tag=C9E97_RS03915;product=6-hydroxyaminopurine reductase;protein_id=WP_000559229.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	5620	6015	.	+	.	ID=gene-C9E97_RS03920;Name=C9E97_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03920;old_locus_tag=C9E97_04035
NZ_PYKA01000034.1	Protein Homology	CDS	5620	6015	.	+	0	ID=cds-WP_000133442.1;Parent=gene-C9E97_RS03920;Dbxref=GenBank:WP_000133442.1;Name=WP_000133442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462938.1;locus_tag=C9E97_RS03920;product=nuclear transport factor 2 family protein;protein_id=WP_000133442.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	6136	6339	.	+	.	ID=gene-C9E97_RS03925;Name=C9E97_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03925;old_locus_tag=C9E97_04040
NZ_PYKA01000034.1	Protein Homology	CDS	6136	6339	.	+	0	ID=cds-WP_000338671.1;Parent=gene-C9E97_RS03925;Dbxref=GenBank:WP_000338671.1;Name=WP_000338671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000338671.1;locus_tag=C9E97_RS03925;product=hypothetical protein;protein_id=WP_000338671.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	6387	7760	.	-	.	ID=gene-C9E97_RS03930;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=C9E97_RS03930;old_locus_tag=C9E97_04045
NZ_PYKA01000034.1	Protein Homology	CDS	6387	7760	.	-	0	ID=cds-WP_000580402.1;Parent=gene-C9E97_RS03930;Dbxref=GenBank:WP_000580402.1;Name=WP_000580402.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462939.1;locus_tag=C9E97_RS03930;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_000580402.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	7757	8455	.	-	.	ID=gene-C9E97_RS03935;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=C9E97_RS03935;old_locus_tag=C9E97_04050
NZ_PYKA01000034.1	Protein Homology	CDS	7757	8455	.	-	0	ID=cds-WP_001033731.1;Parent=gene-C9E97_RS03935;Dbxref=GenBank:WP_001033731.1;Name=WP_001033731.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=C9E97_RS03935;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_001033731.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	8606	9106	.	+	.	ID=gene-C9E97_RS03940;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=C9E97_RS03940;old_locus_tag=C9E97_04055
NZ_PYKA01000034.1	Protein Homology	CDS	8606	9106	.	+	0	ID=cds-WP_001233463.1;Parent=gene-C9E97_RS03940;Dbxref=GenBank:WP_001233463.1;Name=WP_001233463.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462941.1;locus_tag=C9E97_RS03940;product=cell-envelope stress modulator CpxP;protein_id=WP_001233463.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	9255	10157	.	+	.	ID=gene-C9E97_RS03945;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=C9E97_RS03945;old_locus_tag=C9E97_04060
NZ_PYKA01000034.1	Protein Homology	CDS	9255	10157	.	+	0	ID=cds-WP_001077320.1;Parent=gene-C9E97_RS03945;Dbxref=GenBank:WP_001077320.1;Name=WP_001077320.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462942.1;locus_tag=C9E97_RS03945;product=CDF family cation-efflux transporter FieF;protein_id=WP_001077320.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	10342	11304	.	+	.	ID=gene-C9E97_RS03950;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=C9E97_RS03950;old_locus_tag=C9E97_04065
NZ_PYKA01000034.1	Protein Homology	CDS	10342	11304	.	+	0	ID=cds-WP_000591793.1;Parent=gene-C9E97_RS03950;Dbxref=GenBank:WP_000591793.1;Name=WP_000591793.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=C9E97_RS03950;product=6-phosphofructokinase;protein_id=WP_000591793.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	11508	12497	.	+	.	ID=gene-C9E97_RS03955;Name=C9E97_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03955;old_locus_tag=C9E97_04070
NZ_PYKA01000034.1	Protein Homology	CDS	11508	12497	.	+	0	ID=cds-WP_000758711.1;Parent=gene-C9E97_RS03955;Dbxref=GenBank:WP_000758711.1;Name=WP_000758711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=C9E97_RS03955;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_000758711.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	12598	13353	.	+	.	ID=gene-C9E97_RS03960;Name=C9E97_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03960;old_locus_tag=C9E97_04075
NZ_PYKA01000034.1	Protein Homology	CDS	12598	13353	.	+	0	ID=cds-WP_135369580.1;Parent=gene-C9E97_RS03960;Dbxref=GenBank:WP_135369580.1;Name=WP_135369580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=C9E97_RS03960;product=CDP-diacylglycerol diphosphatase;protein_id=WP_135369580.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	13617	14951	.	+	.	ID=gene-C9E97_RS03965;Name=C9E97_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03965;old_locus_tag=C9E97_04080
NZ_PYKA01000034.1	Protein Homology	CDS	13617	14951	.	+	0	ID=cds-WP_000777314.1;Parent=gene-C9E97_RS03965;Dbxref=GenBank:WP_000777314.1;Name=WP_000777314.1;Ontology_term=GO:0008643,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=C9E97_RS03965;product=MFS transporter;protein_id=WP_000777314.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	14962	15921	.	+	.	ID=gene-C9E97_RS03970;Name=C9E97_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03970;old_locus_tag=C9E97_04085
NZ_PYKA01000034.1	Protein Homology	CDS	14962	15921	.	+	0	ID=cds-WP_135369579.1;Parent=gene-C9E97_RS03970;Dbxref=GenBank:WP_135369579.1;Name=WP_135369579.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462947.1;locus_tag=C9E97_RS03970;product=aminoimidazole riboside kinase;protein_id=WP_135369579.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	15931	16971	.	+	.	ID=gene-C9E97_RS03975;Name=C9E97_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03975;old_locus_tag=C9E97_04090
NZ_PYKA01000034.1	Protein Homology	CDS	15931	16971	.	+	0	ID=cds-WP_000557881.1;Parent=gene-C9E97_RS03975;Dbxref=GenBank:WP_000557881.1;Name=WP_000557881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462948.1;locus_tag=C9E97_RS03975;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000557881.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	17034	17756	.	+	.	ID=gene-C9E97_RS03980;Name=C9E97_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03980;old_locus_tag=C9E97_04095
NZ_PYKA01000034.1	Protein Homology	CDS	17034	17756	.	+	0	ID=cds-WP_001535809.1;Parent=gene-C9E97_RS03980;Dbxref=GenBank:WP_001535809.1;Name=WP_001535809.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462949.1;locus_tag=C9E97_RS03980;product=GntR family transcriptional regulator;protein_id=WP_001535809.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	pseudogene	17854	17979	.	+	.	ID=gene-C9E97_RS23550;Name=C9E97_RS23550;end_range=17979,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23550;old_locus_tag=C9E97_04100;partial=true;pseudo=true
NZ_PYKA01000034.1	Protein Homology	CDS	17854	17979	.	+	0	ID=cds-C9E97_RS23550;Parent=gene-C9E97_RS23550;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=17979,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229472.1;locus_tag=C9E97_RS23550;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKA01000034.1	RefSeq	pseudogene	18031	18171	.	+	.	ID=gene-C9E97_RS23555;Name=C9E97_RS23555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23555;old_locus_tag=C9E97_04105;partial=true;pseudo=true;start_range=.,18031
NZ_PYKA01000034.1	Protein Homology	CDS	18031	18171	.	+	0	ID=cds-C9E97_RS23555;Parent=gene-C9E97_RS23555;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008654,GO:0008715,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=C9E97_RS23555;partial=true;product=CDP-diacylglycerol diphosphatase;pseudo=true;start_range=.,18031;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	18261	18611	.	-	.	ID=gene-C9E97_RS03995;Name=C9E97_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03995;old_locus_tag=C9E97_04110
NZ_PYKA01000034.1	Protein Homology	CDS	18261	18611	.	-	0	ID=cds-WP_001173083.1;Parent=gene-C9E97_RS03995;Dbxref=GenBank:WP_001173083.1;Name=WP_001173083.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742380.1;locus_tag=C9E97_RS03995;product=cupin domain-containing protein;protein_id=WP_001173083.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	18625	20217	.	-	.	ID=gene-C9E97_RS04000;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=C9E97_RS04000;old_locus_tag=C9E97_04115
NZ_PYKA01000034.1	Protein Homology	CDS	18625	20217	.	-	0	ID=cds-WP_000113084.1;Parent=gene-C9E97_RS04000;Dbxref=GenBank:WP_000113084.1;Name=WP_000113084.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462953.1;locus_tag=C9E97_RS04000;product=autoinducer-2 kinase;protein_id=WP_000113084.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	20304	21263	.	-	.	ID=gene-C9E97_RS04005;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=C9E97_RS04005;old_locus_tag=C9E97_04120
NZ_PYKA01000034.1	Protein Homology	CDS	20304	21263	.	-	0	ID=cds-WP_001283049.1;Parent=gene-C9E97_RS04005;Dbxref=GenBank:WP_001283049.1;Name=WP_001283049.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462954.1;locus_tag=C9E97_RS04005;product=transcriptional regulator LsrR;protein_id=WP_001283049.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	21519	23054	.	+	.	ID=gene-C9E97_RS04010;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=C9E97_RS04010;old_locus_tag=C9E97_04125
NZ_PYKA01000034.1	Protein Homology	CDS	21519	23054	.	+	0	ID=cds-WP_001167250.1;Parent=gene-C9E97_RS04010;Dbxref=GenBank:WP_001167250.1;Name=WP_001167250.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462955.1;locus_tag=C9E97_RS04010;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_001167250.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	23048	24091	.	+	.	ID=gene-C9E97_RS04015;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=C9E97_RS04015;old_locus_tag=C9E97_04130
NZ_PYKA01000034.1	Protein Homology	CDS	23048	24091	.	+	0	ID=cds-WP_000911134.1;Parent=gene-C9E97_RS04015;Dbxref=GenBank:WP_000911134.1;Name=WP_000911134.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462956.1;locus_tag=C9E97_RS04015;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_000911134.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	24088	25089	.	+	.	ID=gene-C9E97_RS04020;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=C9E97_RS04020;old_locus_tag=C9E97_04135
NZ_PYKA01000034.1	Protein Homology	CDS	24088	25089	.	+	0	ID=cds-WP_000981831.1;Parent=gene-C9E97_RS04020;Dbxref=GenBank:WP_000981831.1;Name=WP_000981831.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462957.1;locus_tag=C9E97_RS04020;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WP_000981831.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	25118	26140	.	+	.	ID=gene-C9E97_RS04025;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=C9E97_RS04025;old_locus_tag=C9E97_04140
NZ_PYKA01000034.1	Protein Homology	CDS	25118	26140	.	+	0	ID=cds-WP_000090737.1;Parent=gene-C9E97_RS04025;Dbxref=GenBank:WP_000090737.1;Name=WP_000090737.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462958.1;locus_tag=C9E97_RS04025;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_000090737.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	26169	27044	.	+	.	ID=gene-C9E97_RS04030;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=C9E97_RS04030;old_locus_tag=C9E97_04145
NZ_PYKA01000034.1	Protein Homology	CDS	26169	27044	.	+	0	ID=cds-WP_000774148.1;Parent=gene-C9E97_RS04030;Dbxref=GenBank:WP_000774148.1;Name=WP_000774148.1;gbkey=CDS;gene=lsrF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774144.1;locus_tag=C9E97_RS04030;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase LsrF;protein_id=WP_000774148.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	27127	27417	.	+	.	ID=gene-C9E97_RS04035;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=C9E97_RS04035;old_locus_tag=C9E97_04150
NZ_PYKA01000034.1	Protein Homology	CDS	27127	27417	.	+	0	ID=cds-WP_001543603.1;Parent=gene-C9E97_RS04035;Dbxref=GenBank:WP_001543603.1;Name=WP_001543603.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=C9E97_RS04035;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_001543603.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	27427	28191	.	+	.	ID=gene-C9E97_RS04040;Name=C9E97_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04040;old_locus_tag=C9E97_04155
NZ_PYKA01000034.1	Protein Homology	CDS	27427	28191	.	+	0	ID=cds-WP_135369519.1;Parent=gene-C9E97_RS04040;Dbxref=GenBank:WP_135369519.1;Name=WP_135369519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462961.1;locus_tag=C9E97_RS04040;product=epimerase;protein_id=WP_135369519.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	28283	29050	.	-	.	ID=gene-C9E97_RS04045;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=C9E97_RS04045;old_locus_tag=C9E97_04160
NZ_PYKA01000034.1	Protein Homology	CDS	28283	29050	.	-	0	ID=cds-WP_001216339.1;Parent=gene-C9E97_RS04045;Dbxref=GenBank:WP_001216339.1;Name=WP_001216339.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462962.1;locus_tag=C9E97_RS04045;product=triose-phosphate isomerase;protein_id=WP_001216339.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	29163	29759	.	-	.	ID=gene-C9E97_RS04050;Name=C9E97_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04050;old_locus_tag=C9E97_04165
NZ_PYKA01000034.1	Protein Homology	CDS	29163	29759	.	-	0	ID=cds-WP_000802241.1;Parent=gene-C9E97_RS04050;Dbxref=GenBank:WP_000802241.1;Name=WP_000802241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462963.1;locus_tag=C9E97_RS04050;product=YiiQ family protein;protein_id=WP_000802241.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	29860	30288	.	+	.	ID=gene-C9E97_RS04055;Name=C9E97_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04055;old_locus_tag=C9E97_04170
NZ_PYKA01000034.1	Protein Homology	CDS	29860	30288	.	+	0	ID=cds-WP_000155233.1;Parent=gene-C9E97_RS04055;Dbxref=GenBank:WP_000155233.1;Name=WP_000155233.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006724708.1;locus_tag=C9E97_RS04055;product=DUF805 domain-containing protein;protein_id=WP_000155233.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	30394	31140	.	-	.	ID=gene-C9E97_RS04060;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=C9E97_RS04060;old_locus_tag=C9E97_04175
NZ_PYKA01000034.1	Protein Homology	CDS	30394	31140	.	-	0	ID=cds-WP_000796303.1;Parent=gene-C9E97_RS04060;Dbxref=GenBank:WP_000796303.1;Name=WP_000796303.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462965.1;locus_tag=C9E97_RS04060;product=ferredoxin--NADP(+) reductase;protein_id=WP_000796303.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	31237	32247	.	-	.	ID=gene-C9E97_RS04065;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=C9E97_RS04065;old_locus_tag=C9E97_04180
NZ_PYKA01000034.1	Protein Homology	CDS	31237	32247	.	-	0	ID=cds-WP_001250617.1;Parent=gene-C9E97_RS04065;Dbxref=GenBank:WP_001250617.1;Name=WP_001250617.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462966.1;locus_tag=C9E97_RS04065;product=class II fructose-bisphosphatase;protein_id=WP_001250617.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	32359	33867	.	-	.	ID=gene-C9E97_RS04070;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=C9E97_RS04070;old_locus_tag=C9E97_04185
NZ_PYKA01000034.1	Protein Homology	CDS	32359	33867	.	-	0	ID=cds-WP_001523753.1;Parent=gene-C9E97_RS04070;Dbxref=GenBank:WP_001523753.1;Name=WP_001523753.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462967.1;locus_tag=C9E97_RS04070;product=glycerol kinase GlpK;protein_id=WP_001523753.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	33888	34733	.	-	.	ID=gene-C9E97_RS04075;Name=C9E97_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04075;old_locus_tag=C9E97_04190
NZ_PYKA01000034.1	Protein Homology	CDS	33888	34733	.	-	0	ID=cds-WP_000084285.1;Parent=gene-C9E97_RS04075;Dbxref=GenBank:WP_000084285.1;Name=WP_000084285.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462968.1;locus_tag=C9E97_RS04075;product=MIP/aquaporin family protein;protein_id=WP_000084285.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	35132	35371	.	+	.	ID=gene-C9E97_RS04080;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=C9E97_RS04080;old_locus_tag=C9E97_04195
NZ_PYKA01000034.1	Protein Homology	CDS	35132	35371	.	+	0	ID=cds-WP_000051370.1;Parent=gene-C9E97_RS04080;Dbxref=GenBank:WP_000051370.1;Name=WP_000051370.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229475.1;locus_tag=C9E97_RS04080;product=septal ring assembly protein ZapB;protein_id=WP_000051370.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	35593	36078	.	-	.	ID=gene-C9E97_RS04085;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=C9E97_RS04085;old_locus_tag=C9E97_04200
NZ_PYKA01000034.1	Protein Homology	CDS	35593	36078	.	-	0	ID=cds-WP_000872918.1;Parent=gene-C9E97_RS04085;Dbxref=GenBank:WP_000872918.1;Name=WP_000872918.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=C9E97_RS04085;product=ribonuclease E activity regulator RraA;protein_id=WP_000872918.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	36171	37100	.	-	.	ID=gene-C9E97_RS04090;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=C9E97_RS04090;old_locus_tag=C9E97_04205
NZ_PYKA01000034.1	Protein Homology	CDS	36171	37100	.	-	0	ID=cds-WP_000139639.1;Parent=gene-C9E97_RS04090;Dbxref=GenBank:WP_000139639.1;Name=WP_000139639.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462971.1;locus_tag=C9E97_RS04090;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_000139639.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	37167	38498	.	-	.	ID=gene-C9E97_RS04095;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=C9E97_RS04095;old_locus_tag=C9E97_04210
NZ_PYKA01000034.1	Protein Homology	CDS	37167	38498	.	-	0	ID=cds-WP_050068037.1;Parent=gene-C9E97_RS04095;Dbxref=GenBank:WP_050068037.1;Name=WP_050068037.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=C9E97_RS04095;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_050068037.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	38508	39038	.	-	.	ID=gene-C9E97_RS04100;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=C9E97_RS04100;old_locus_tag=C9E97_04215
NZ_PYKA01000034.1	Protein Homology	CDS	38508	39038	.	-	0	ID=cds-WP_000208240.1;Parent=gene-C9E97_RS04100;Dbxref=GenBank:WP_000208240.1;Name=WP_000208240.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462973.1;locus_tag=C9E97_RS04100;product=ATP-dependent protease subunit HslV;protein_id=WP_000208240.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	39130	40116	.	-	.	ID=gene-C9E97_RS04105;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=C9E97_RS04105;old_locus_tag=C9E97_04220
NZ_PYKA01000034.1	Protein Homology	CDS	39130	40116	.	-	0	ID=cds-WP_000068803.1;Parent=gene-C9E97_RS04105;Dbxref=GenBank:WP_000068803.1;Name=WP_000068803.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462974.1;locus_tag=C9E97_RS04105;product=cell division protein FtsN;protein_id=WP_000068803.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	40210	41235	.	-	.	ID=gene-C9E97_RS04110;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=C9E97_RS04110;old_locus_tag=C9E97_04225
NZ_PYKA01000034.1	Protein Homology	CDS	40210	41235	.	-	0	ID=cds-WP_000841337.1;Parent=gene-C9E97_RS04110;Dbxref=GenBank:WP_000841337.1;Name=WP_000841337.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462975.1;locus_tag=C9E97_RS04110;product=DNA-binding transcriptional regulator CytR;protein_id=WP_000841337.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	41390	43588	.	-	.	ID=gene-C9E97_RS04115;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=C9E97_RS04115;old_locus_tag=C9E97_04230
NZ_PYKA01000034.1	Protein Homology	CDS	41390	43588	.	-	0	ID=cds-WP_020437544.1;Parent=gene-C9E97_RS04115;Dbxref=GenBank:WP_020437544.1;Name=WP_020437544.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462976.1;locus_tag=C9E97_RS04115;product=primosomal protein N';protein_id=WP_020437544.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	43792	44004	.	+	.	ID=gene-C9E97_RS04120;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=C9E97_RS04120;old_locus_tag=C9E97_04235
NZ_PYKA01000034.1	Protein Homology	CDS	43792	44004	.	+	0	ID=cds-WP_000715284.1;Parent=gene-C9E97_RS04120;Dbxref=GenBank:WP_000715284.1;Name=WP_000715284.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462977.1;locus_tag=C9E97_RS04120;product=50S ribosomal protein L31;protein_id=WP_000715284.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	44049	44711	.	-	.	ID=gene-C9E97_RS04125;Name=C9E97_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04125;old_locus_tag=C9E97_04240
NZ_PYKA01000034.1	Protein Homology	CDS	44049	44711	.	-	0	ID=cds-WP_000792803.1;Parent=gene-C9E97_RS04125;Dbxref=GenBank:WP_000792803.1;Name=WP_000792803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462978.1;locus_tag=C9E97_RS04125;product=TIGR02117 family protein;protein_id=WP_000792803.1;transl_table=11
NZ_PYKA01000034.1	RefSeq	gene	44912	46702	.	-	.	ID=gene-C9E97_RS04130;Name=C9E97_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04130;old_locus_tag=C9E97_04245
NZ_PYKA01000034.1	Protein Homology	CDS	44912	46702	.	-	0	ID=cds-WP_000899644.1;Parent=gene-C9E97_RS04130;Dbxref=GenBank:WP_000899644.1;Name=WP_000899644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=C9E97_RS04130;product=aryl-sulfate sulfotransferase;protein_id=WP_000899644.1;transl_table=11
##sequence-region NZ_PYKA01000097.1 1 175807
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000097.1	RefSeq	region	1	175807	.	+	.	ID=NZ_PYKA01000097.1:1..175807;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000097.1	RefSeq	gene	149	2596	.	-	.	ID=gene-C9E97_RS13015;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=C9E97_RS13015;old_locus_tag=C9E97_13305
NZ_PYKA01000097.1	Protein Homology	CDS	149	2596	.	-	0	ID=cds-WP_000993424.1;Parent=gene-C9E97_RS13015;Dbxref=GenBank:WP_000993424.1;Name=WP_000993424.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436446.1;locus_tag=C9E97_RS13015;product=glycogen phosphorylase;protein_id=WP_000993424.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	2616	4049	.	-	.	ID=gene-C9E97_RS13020;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=C9E97_RS13020;old_locus_tag=C9E97_13310
NZ_PYKA01000097.1	Protein Homology	CDS	2616	4049	.	-	0	ID=cds-WP_001197669.1;Parent=gene-C9E97_RS13020;Dbxref=GenBank:WP_001197669.1;Name=WP_001197669.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462436.1;locus_tag=C9E97_RS13020;product=glycogen synthase GlgA;protein_id=WP_001197669.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	4049	5344	.	-	.	ID=gene-C9E97_RS13025;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=C9E97_RS13025;old_locus_tag=C9E97_13315
NZ_PYKA01000097.1	Protein Homology	CDS	4049	5344	.	-	0	ID=cds-WP_000253994.1;Parent=gene-C9E97_RS13025;Dbxref=GenBank:WP_000253994.1;Name=WP_000253994.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462437.1;locus_tag=C9E97_RS13025;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000253994.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	5359	7335	.	-	.	ID=gene-C9E97_RS13030;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=C9E97_RS13030;old_locus_tag=C9E97_13320
NZ_PYKA01000097.1	Protein Homology	CDS	5359	7335	.	-	0	ID=cds-WP_064047126.1;Parent=gene-C9E97_RS13030;Dbxref=GenBank:WP_064047126.1;Name=WP_064047126.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462438.1;locus_tag=C9E97_RS13030;product=glycogen debranching protein GlgX;protein_id=WP_064047126.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	7332	9518	.	-	.	ID=gene-C9E97_RS13035;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=C9E97_RS13035;old_locus_tag=C9E97_13325
NZ_PYKA01000097.1	Protein Homology	CDS	7332	9518	.	-	0	ID=cds-WP_020899336.1;Parent=gene-C9E97_RS13035;Dbxref=GenBank:WP_020899336.1;Name=WP_020899336.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462439.1;locus_tag=C9E97_RS13035;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_020899336.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	9865	10971	.	-	.	ID=gene-C9E97_RS13040;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=C9E97_RS13040;old_locus_tag=C9E97_13330
NZ_PYKA01000097.1	Protein Homology	CDS	9865	10971	.	-	0	ID=cds-WP_000799940.1;Parent=gene-C9E97_RS13040;Dbxref=GenBank:WP_000799940.1;Name=WP_000799940.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462440.1;locus_tag=C9E97_RS13040;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799940.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	pseudogene	11098	11471	.	+	.	ID=gene-C9E97_RS13045;Name=C9E97_RS13045;end_range=11471,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS13045;old_locus_tag=C9E97_13335;partial=true;pseudo=true
NZ_PYKA01000097.1	Protein Homology	CDS	11098	11471	.	+	0	ID=cds-C9E97_RS13045;Parent=gene-C9E97_RS13045;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=11471,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_452851.1;locus_tag=C9E97_RS13045;partial=true;product=MarC family protein;pseudo=true;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	11394	12734	.	-	.	ID=gene-C9E97_RS13050;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=C9E97_RS13050;old_locus_tag=C9E97_13340
NZ_PYKA01000097.1	Protein Homology	CDS	11394	12734	.	-	0	ID=cds-WP_000105950.1;Parent=gene-C9E97_RS13050;Dbxref=GenBank:WP_000105950.1;Name=WP_000105950.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462442.1;locus_tag=C9E97_RS13050;product=gluconate transporter;protein_id=WP_000105950.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	12731	13264	.	-	.	ID=gene-C9E97_RS13055;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=C9E97_RS13055;old_locus_tag=C9E97_13345
NZ_PYKA01000097.1	Protein Homology	CDS	12731	13264	.	-	0	ID=cds-WP_000108342.1;Parent=gene-C9E97_RS13055;Dbxref=GenBank:WP_000108342.1;Name=WP_000108342.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462443.1;locus_tag=C9E97_RS13055;product=gluconokinase;protein_id=WP_000108342.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	13403	14398	.	-	.	ID=gene-C9E97_RS13060;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=C9E97_RS13060;old_locus_tag=C9E97_13350
NZ_PYKA01000097.1	Protein Homology	CDS	13403	14398	.	-	0	ID=cds-WP_000730239.1;Parent=gene-C9E97_RS13060;Dbxref=GenBank:WP_000730239.1;Name=WP_000730239.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=C9E97_RS13060;product=gluconate operon transcriptional repressor GntR;protein_id=WP_000730239.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	14623	15318	.	-	.	ID=gene-C9E97_RS13065;Name=C9E97_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13065;old_locus_tag=C9E97_13355
NZ_PYKA01000097.1	Protein Homology	CDS	14623	15318	.	-	0	ID=cds-WP_000639789.1;Parent=gene-C9E97_RS13065;Dbxref=GenBank:WP_000639789.1;Name=WP_000639789.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=C9E97_RS13065;product=pirin family protein;protein_id=WP_000639789.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	15442	16479	.	-	.	ID=gene-C9E97_RS13070;Name=C9E97_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13070;old_locus_tag=C9E97_13360
NZ_PYKA01000097.1	Protein Homology	CDS	15442	16479	.	-	0	ID=cds-WP_047605573.1;Parent=gene-C9E97_RS13070;Dbxref=GenBank:WP_047605573.1;Name=WP_047605573.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462446.1;locus_tag=C9E97_RS13070;product=oxidoreductase;protein_id=WP_047605573.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	16951	17439	.	+	.	ID=gene-C9E97_RS13075;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=C9E97_RS13075;old_locus_tag=C9E97_13365
NZ_PYKA01000097.1	Protein Homology	CDS	16951	17439	.	+	0	ID=cds-WP_001290279.1;Parent=gene-C9E97_RS13075;Dbxref=GenBank:WP_001290279.1;Name=WP_001290279.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462447.1;locus_tag=C9E97_RS13075;product=N-acetyltransferase;protein_id=WP_001290279.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	17704	18918	.	+	.	ID=gene-C9E97_RS13080;Name=C9E97_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13080;old_locus_tag=C9E97_13370
NZ_PYKA01000097.1	Protein Homology	CDS	17704	18918	.	+	0	ID=cds-WP_000667440.1;Parent=gene-C9E97_RS13080;Dbxref=GenBank:WP_000667440.1;Name=WP_000667440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462448.3;locus_tag=C9E97_RS13080;product=PfkB family carbohydrate kinase;protein_id=WP_000667440.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	18934	19695	.	+	.	ID=gene-C9E97_RS13085;Name=C9E97_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13085;old_locus_tag=C9E97_13375
NZ_PYKA01000097.1	Protein Homology	CDS	18934	19695	.	+	0	ID=cds-WP_001066509.1;Parent=gene-C9E97_RS13085;Dbxref=GenBank:WP_001066509.1;Name=WP_001066509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462449.1;locus_tag=C9E97_RS13085;product=glutamine amidotransferase;protein_id=WP_001066509.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	19749	20720	.	+	.	ID=gene-C9E97_RS13090;Name=C9E97_RS13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13090;old_locus_tag=C9E97_13380
NZ_PYKA01000097.1	Protein Homology	CDS	19749	20720	.	+	0	ID=cds-WP_001038953.1;Parent=gene-C9E97_RS13090;Dbxref=GenBank:WP_001038953.1;Name=WP_001038953.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462450.1;locus_tag=C9E97_RS13090;product=DMT family transporter;protein_id=WP_001038953.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	20717	21751	.	+	.	ID=gene-C9E97_RS13095;Name=C9E97_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13095;old_locus_tag=C9E97_13385
NZ_PYKA01000097.1	Protein Homology	CDS	20717	21751	.	+	0	ID=cds-WP_079827709.1;Parent=gene-C9E97_RS13095;Dbxref=GenBank:WP_079827709.1;Name=WP_079827709.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462451.1;locus_tag=C9E97_RS13095;product=phosphotriesterase family protein;protein_id=WP_079827709.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	21796	23538	.	-	.	ID=gene-C9E97_RS13100;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=C9E97_RS13100;old_locus_tag=C9E97_13390
NZ_PYKA01000097.1	Protein Homology	CDS	21796	23538	.	-	0	ID=cds-WP_135369724.1;Parent=gene-C9E97_RS13100;Dbxref=GenBank:WP_135369724.1;Name=WP_135369724.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462452.1;locus_tag=C9E97_RS13100;product=gamma-glutamyltransferase;protein_id=WP_135369724.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	23664	24080	.	+	.	ID=gene-C9E97_RS13105;Name=C9E97_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13105;old_locus_tag=C9E97_13395
NZ_PYKA01000097.1	Protein Homology	CDS	23664	24080	.	+	0	ID=cds-WP_000826042.1;Parent=gene-C9E97_RS13105;Dbxref=GenBank:WP_000826042.1;Name=WP_000826042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462453.1;locus_tag=C9E97_RS13105;product=DUF2756 family protein;protein_id=WP_000826042.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	24093	24833	.	-	.	ID=gene-C9E97_RS13110;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=C9E97_RS13110;old_locus_tag=C9E97_13400
NZ_PYKA01000097.1	Protein Homology	CDS	24093	24833	.	-	0	ID=cds-WP_000073542.1;Parent=gene-C9E97_RS13110;Dbxref=GenBank:WP_000073542.1;Name=WP_000073542.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462454.1;locus_tag=C9E97_RS13110;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000073542.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	24830	25900	.	-	.	ID=gene-C9E97_RS13115;Name=C9E97_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13115;old_locus_tag=C9E97_13405
NZ_PYKA01000097.1	Protein Homology	CDS	24830	25900	.	-	0	ID=cds-WP_000907838.1;Parent=gene-C9E97_RS13115;Dbxref=GenBank:WP_000907838.1;Name=WP_000907838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462455.1;locus_tag=C9E97_RS13115;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_000907838.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	25902	26747	.	-	.	ID=gene-C9E97_RS13120;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=C9E97_RS13120;old_locus_tag=C9E97_13410
NZ_PYKA01000097.1	Protein Homology	CDS	25902	26747	.	-	0	ID=cds-WP_000572196.1;Parent=gene-C9E97_RS13120;Dbxref=GenBank:WP_000572196.1;Name=WP_000572196.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=C9E97_RS13120;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_000572196.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	26744	27631	.	-	.	ID=gene-C9E97_RS13125;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=C9E97_RS13125;old_locus_tag=C9E97_13415
NZ_PYKA01000097.1	Protein Homology	CDS	26744	27631	.	-	0	ID=cds-WP_135369723.1;Parent=gene-C9E97_RS13125;Dbxref=GenBank:WP_135369723.1;Name=WP_135369723.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=C9E97_RS13125;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_135369723.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	27736	29052	.	-	.	ID=gene-C9E97_RS13130;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=C9E97_RS13130;old_locus_tag=C9E97_13420
NZ_PYKA01000097.1	Protein Homology	CDS	27736	29052	.	-	0	ID=cds-WP_000624747.1;Parent=gene-C9E97_RS13130;Dbxref=GenBank:WP_000624747.1;Name=WP_000624747.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462458.1;locus_tag=C9E97_RS13130;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_000624747.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	29285	29563	.	-	.	ID=gene-C9E97_RS13135;Name=C9E97_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13135;old_locus_tag=C9E97_13425
NZ_PYKA01000097.1	Protein Homology	CDS	29285	29563	.	-	0	ID=cds-WP_000621260.1;Parent=gene-C9E97_RS13135;Dbxref=GenBank:WP_000621260.1;Name=WP_000621260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000621258.1;locus_tag=C9E97_RS13135;product=hypothetical protein;protein_id=WP_000621260.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	29727	30440	.	-	.	ID=gene-C9E97_RS13140;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=C9E97_RS13140;old_locus_tag=C9E97_13430
NZ_PYKA01000097.1	Protein Homology	CDS	29727	30440	.	-	0	ID=cds-WP_000416114.1;Parent=gene-C9E97_RS13140;Dbxref=GenBank:WP_000416114.1;Name=WP_000416114.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462461.1;locus_tag=C9E97_RS13140;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_000416114.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	30442	31209	.	-	.	ID=gene-C9E97_RS13145;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=C9E97_RS13145;old_locus_tag=C9E97_13435
NZ_PYKA01000097.1	Protein Homology	CDS	30442	31209	.	-	0	ID=cds-WP_000082083.1;Parent=gene-C9E97_RS13145;Dbxref=GenBank:WP_000082083.1;Name=WP_000082083.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=C9E97_RS13145;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_000082083.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	31206	32483	.	-	.	ID=gene-C9E97_RS13150;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=C9E97_RS13150;old_locus_tag=C9E97_13440
NZ_PYKA01000097.1	Protein Homology	CDS	31206	32483	.	-	0	ID=cds-WP_000803764.1;Parent=gene-C9E97_RS13150;Dbxref=GenBank:WP_000803764.1;Name=WP_000803764.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462463.1;locus_tag=C9E97_RS13150;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_000803764.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	32480	33406	.	-	.	ID=gene-C9E97_RS13155;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=C9E97_RS13155;old_locus_tag=C9E97_13445
NZ_PYKA01000097.1	Protein Homology	CDS	32480	33406	.	-	0	ID=cds-WP_000003007.1;Parent=gene-C9E97_RS13155;Dbxref=GenBank:WP_000003007.1;Name=WP_000003007.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=C9E97_RS13155;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_000003007.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	33466	34575	.	-	.	ID=gene-C9E97_RS13160;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=C9E97_RS13160;old_locus_tag=C9E97_13450
NZ_PYKA01000097.1	Protein Homology	CDS	33466	34575	.	-	0	ID=cds-WP_000822976.1;Parent=gene-C9E97_RS13160;Dbxref=GenBank:WP_000822976.1;Name=WP_000822976.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462465.1;locus_tag=C9E97_RS13160;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_000822976.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	34997	35380	.	+	.	ID=gene-C9E97_RS13165;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=C9E97_RS13165;old_locus_tag=C9E97_13455
NZ_PYKA01000097.1	Protein Homology	CDS	34997	35380	.	+	0	ID=cds-WP_000778873.1;Parent=gene-C9E97_RS13165;Dbxref=GenBank:WP_000778873.1;Name=WP_000778873.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462466.1;locus_tag=C9E97_RS13165;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_000778873.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	35358	35492	.	+	.	ID=gene-C9E97_RS13170;Name=C9E97_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13170;old_locus_tag=C9E97_13460
NZ_PYKA01000097.1	Protein Homology	CDS	35358	35492	.	+	0	ID=cds-WP_001517957.1;Parent=gene-C9E97_RS13170;Dbxref=GenBank:WP_001517957.1;Name=WP_001517957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462467.1;locus_tag=C9E97_RS13170;product=hypothetical protein;protein_id=WP_001517957.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	35576	36679	.	-	.	ID=gene-C9E97_RS13175;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=C9E97_RS13175;old_locus_tag=C9E97_13465
NZ_PYKA01000097.1	Protein Homology	CDS	35576	36679	.	-	0	ID=cds-WP_001528146.1;Parent=gene-C9E97_RS13175;Dbxref=GenBank:WP_001528146.1;Name=WP_001528146.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=C9E97_RS13175;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_001528146.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	37001	37855	.	-	.	ID=gene-C9E97_RS13180;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=C9E97_RS13180;old_locus_tag=C9E97_13470
NZ_PYKA01000097.1	Protein Homology	CDS	37001	37855	.	-	0	ID=cds-WP_000159621.1;Parent=gene-C9E97_RS13180;Dbxref=GenBank:WP_000159621.1;Name=WP_000159621.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462469.1;locus_tag=C9E97_RS13180;product=RNA polymerase sigma factor RpoH;protein_id=WP_000159621.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	38101	39156	.	-	.	ID=gene-C9E97_RS13185;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=C9E97_RS13185;old_locus_tag=C9E97_13475
NZ_PYKA01000097.1	Protein Homology	CDS	38101	39156	.	-	0	ID=cds-WP_001081707.1;Parent=gene-C9E97_RS13185;Dbxref=GenBank:WP_001081707.1;Name=WP_001081707.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462470.1;locus_tag=C9E97_RS13185;product=permease-like cell division protein FtsX;protein_id=WP_001081707.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	39149	39817	.	-	.	ID=gene-C9E97_RS13190;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=C9E97_RS13190;old_locus_tag=C9E97_13480
NZ_PYKA01000097.1	Protein Homology	CDS	39149	39817	.	-	0	ID=cds-WP_000617729.1;Parent=gene-C9E97_RS13190;Dbxref=GenBank:WP_000617729.1;Name=WP_000617729.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462471.1;locus_tag=C9E97_RS13190;product=cell division ATP-binding protein FtsE;protein_id=WP_000617729.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	39820	41295	.	-	.	ID=gene-C9E97_RS13195;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=C9E97_RS13195;old_locus_tag=C9E97_13485
NZ_PYKA01000097.1	Protein Homology	CDS	39820	41295	.	-	0	ID=cds-WP_031601980.1;Parent=gene-C9E97_RS13195;Dbxref=GenBank:WP_031601980.1;Name=WP_031601980.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462472.1;locus_tag=C9E97_RS13195;product=signal recognition particle-docking protein FtsY;protein_id=WP_031601980.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	41421	42017	.	+	.	ID=gene-C9E97_RS13200;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=C9E97_RS13200;old_locus_tag=C9E97_13490
NZ_PYKA01000097.1	Protein Homology	CDS	41421	42017	.	+	0	ID=cds-WP_023243431.1;Parent=gene-C9E97_RS13200;Dbxref=GenBank:WP_023243431.1;Name=WP_023243431.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462473.1;locus_tag=C9E97_RS13200;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_023243431.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	42007	42276	.	+	.	ID=gene-C9E97_RS13205;Name=C9E97_RS13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13205;old_locus_tag=C9E97_13495
NZ_PYKA01000097.1	Protein Homology	CDS	42007	42276	.	+	0	ID=cds-WP_167850410.1;Parent=gene-C9E97_RS13205;Dbxref=GenBank:WP_167850410.1;Name=WP_167850410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=C9E97_RS13205;product=DUF1145 family protein;protein_id=WP_167850410.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	42298	42669	.	-	.	ID=gene-C9E97_RS13210;Name=C9E97_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13210;old_locus_tag=C9E97_13500
NZ_PYKA01000097.1	Protein Homology	CDS	42298	42669	.	-	0	ID=cds-WP_000042851.1;Parent=gene-C9E97_RS13210;Dbxref=GenBank:WP_000042851.1;Name=WP_000042851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462475.1;locus_tag=C9E97_RS13210;product=DUF2500 domain-containing protein;protein_id=WP_000042851.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	42811	43437	.	+	.	ID=gene-C9E97_RS13215;Name=C9E97_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13215;old_locus_tag=C9E97_13505
NZ_PYKA01000097.1	Protein Homology	CDS	42811	43437	.	+	0	ID=cds-WP_000964735.1;Parent=gene-C9E97_RS13215;Dbxref=GenBank:WP_000964735.1;Name=WP_000964735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462476.1;locus_tag=C9E97_RS13215;product=lysoplasmalogenase;protein_id=WP_000964735.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	43518	45716	.	+	.	ID=gene-C9E97_RS13220;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=C9E97_RS13220;old_locus_tag=C9E97_13510
NZ_PYKA01000097.1	Protein Homology	CDS	43518	45716	.	+	0	ID=cds-WP_135369629.1;Parent=gene-C9E97_RS13220;Dbxref=GenBank:WP_135369629.1;Name=WP_135369629.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709239.1;locus_tag=C9E97_RS13220;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_135369629.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	45916	47559	.	+	.	ID=gene-C9E97_RS13225;Name=tcp;gbkey=Gene;gene=tcp;gene_biotype=protein_coding;locus_tag=C9E97_RS13225;old_locus_tag=C9E97_13515
NZ_PYKA01000097.1	Protein Homology	CDS	45916	47559	.	+	0	ID=cds-WP_000789678.1;Parent=gene-C9E97_RS13225;Dbxref=GenBank:WP_000789678.1;Name=WP_000789678.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888;gbkey=CDS;gene=tcp;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462478.1;locus_tag=C9E97_RS13225;product=methyl-accepting chemotaxis citrate transducer;protein_id=WP_000789678.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	47583	47828	.	-	.	ID=gene-C9E97_RS13230;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=C9E97_RS13230;old_locus_tag=C9E97_13520
NZ_PYKA01000097.1	Protein Homology	CDS	47583	47828	.	-	0	ID=cds-WP_001541054.1;Parent=gene-C9E97_RS13230;Dbxref=GenBank:WP_001541054.1;Name=WP_001541054.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462479.1;locus_tag=C9E97_RS13230;product=sulfurtransferase TusA;protein_id=WP_001541054.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	47998	48663	.	+	.	ID=gene-C9E97_RS13235;Name=C9E97_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13235;old_locus_tag=C9E97_13525
NZ_PYKA01000097.1	Protein Homology	CDS	47998	48663	.	+	0	ID=cds-WP_000187489.1;Parent=gene-C9E97_RS13235;Dbxref=GenBank:WP_000187489.1;Name=WP_000187489.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462480.1;locus_tag=C9E97_RS13235;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_000187489.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	48736	49293	.	+	.	ID=gene-C9E97_RS13240;Name=C9E97_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13240;old_locus_tag=C9E97_13530
NZ_PYKA01000097.1	Protein Homology	CDS	48736	49293	.	+	0	ID=cds-WP_021000870.1;Parent=gene-C9E97_RS13240;Dbxref=GenBank:WP_021000870.1;Name=WP_021000870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462481.1;locus_tag=C9E97_RS13240;product=DcrB family lipoprotein;protein_id=WP_021000870.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	49297	50556	.	-	.	ID=gene-C9E97_RS13245;Name=C9E97_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13245;old_locus_tag=C9E97_13535
NZ_PYKA01000097.1	Protein Homology	CDS	49297	50556	.	-	0	ID=cds-WP_077248389.1;Parent=gene-C9E97_RS13245;Dbxref=GenBank:WP_077248389.1;Name=WP_077248389.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462482.3;locus_tag=C9E97_RS13245;product=MFS transporter;protein_id=WP_077248389.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	50646	51695	.	+	.	ID=gene-C9E97_RS13250;Name=C9E97_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13250;old_locus_tag=C9E97_13540
NZ_PYKA01000097.1	Protein Homology	CDS	50646	51695	.	+	0	ID=cds-WP_000179589.1;Parent=gene-C9E97_RS13250;Dbxref=GenBank:WP_000179589.1;Name=WP_000179589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462483.1;locus_tag=C9E97_RS13250;product=AI-2E family transporter;protein_id=WP_000179589.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	51747	52325	.	+	.	ID=gene-C9E97_RS13255;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=C9E97_RS13255;old_locus_tag=C9E97_13545
NZ_PYKA01000097.1	Protein Homology	CDS	51747	52325	.	+	0	ID=cds-WP_045342439.1;Parent=gene-C9E97_RS13255;Dbxref=GenBank:WP_045342439.1;Name=WP_045342439.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462484.1;locus_tag=C9E97_RS13255;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_045342439.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	52417	52818	.	+	.	ID=gene-C9E97_RS13260;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=C9E97_RS13260;old_locus_tag=C9E97_13550
NZ_PYKA01000097.1	Protein Homology	CDS	52417	52818	.	+	0	ID=cds-WP_135369630.1;Parent=gene-C9E97_RS13260;Dbxref=GenBank:WP_135369630.1;Name=WP_135369630.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462485.1;locus_tag=C9E97_RS13260;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_135369630.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	52920	54044	.	-	.	ID=gene-C9E97_RS13265;Name=C9E97_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13265;old_locus_tag=C9E97_13555
NZ_PYKA01000097.1	Protein Homology	CDS	52920	54044	.	-	0	ID=cds-WP_001214765.1;Parent=gene-C9E97_RS13265;Dbxref=GenBank:WP_001214765.1;Name=WP_001214765.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=C9E97_RS13265;product=ABC transporter permease;protein_id=WP_001214765.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	54044	56785	.	-	.	ID=gene-C9E97_RS13270;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=C9E97_RS13270;old_locus_tag=C9E97_13560
NZ_PYKA01000097.1	Protein Homology	CDS	54044	56785	.	-	0	ID=cds-WP_135369631.1;Parent=gene-C9E97_RS13270;Dbxref=GenBank:WP_135369631.1;Name=WP_135369631.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709254.1;locus_tag=C9E97_RS13270;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_135369631.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	56782	57849	.	-	.	ID=gene-C9E97_RS13275;Name=C9E97_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13275;old_locus_tag=C9E97_13565
NZ_PYKA01000097.1	Protein Homology	CDS	56782	57849	.	-	0	ID=cds-WP_000359836.1;Parent=gene-C9E97_RS13275;Dbxref=GenBank:WP_000359836.1;Name=WP_000359836.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462488.1;locus_tag=C9E97_RS13275;product=HlyD family secretion protein;protein_id=WP_000359836.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	58155	59351	.	-	.	ID=gene-C9E97_RS13280;Name=C9E97_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13280;old_locus_tag=C9E97_13570
NZ_PYKA01000097.1	Protein Homology	CDS	58155	59351	.	-	0	ID=cds-WP_135369632.1;Parent=gene-C9E97_RS13280;Dbxref=GenBank:WP_135369632.1;Name=WP_135369632.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462489.1;locus_tag=C9E97_RS13280;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_135369632.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	59582	61078	.	+	.	ID=gene-C9E97_RS13285;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=C9E97_RS13285;old_locus_tag=C9E97_13575
NZ_PYKA01000097.1	Protein Homology	CDS	59582	61078	.	+	0	ID=cds-WP_000902764.1;Parent=gene-C9E97_RS13285;Dbxref=GenBank:WP_000902764.1;Name=WP_000902764.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462490.1;locus_tag=C9E97_RS13285;product=inorganic phosphate transporter PitA;protein_id=WP_000902764.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	61219	61554	.	-	.	ID=gene-C9E97_RS13290;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=C9E97_RS13290;old_locus_tag=C9E97_13580
NZ_PYKA01000097.1	Protein Homology	CDS	61219	61554	.	-	0	ID=cds-WP_000626193.1;Parent=gene-C9E97_RS13290;Dbxref=GenBank:WP_000626193.1;Name=WP_000626193.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462491.1;locus_tag=C9E97_RS13290;product=universal stress protein UspB;protein_id=WP_000626193.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	61942	62370	.	+	.	ID=gene-C9E97_RS13295;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=C9E97_RS13295;old_locus_tag=C9E97_13585
NZ_PYKA01000097.1	Protein Homology	CDS	61942	62370	.	+	0	ID=cds-WP_135369633.1;Parent=gene-C9E97_RS13295;Dbxref=GenBank:WP_135369633.1;Name=WP_135369633.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001472469.1;locus_tag=C9E97_RS13295;product=universal stress protein UspA;protein_id=WP_135369633.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	62701	64173	.	+	.	ID=gene-C9E97_RS13300;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=C9E97_RS13300;old_locus_tag=C9E97_13590
NZ_PYKA01000097.1	Protein Homology	CDS	62701	64173	.	+	0	ID=cds-WP_001098270.1;Parent=gene-C9E97_RS13300;Dbxref=GenBank:WP_001098270.1;Name=WP_001098270.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462493.1;locus_tag=C9E97_RS13300;product=dipeptide/tripeptide permease DtpB;protein_id=WP_001098270.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	64265	65023	.	-	.	ID=gene-C9E97_RS13305;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=C9E97_RS13305;old_locus_tag=C9E97_13595
NZ_PYKA01000097.1	Protein Homology	CDS	64265	65023	.	-	0	ID=cds-WP_001165127.1;Parent=gene-C9E97_RS13305;Dbxref=GenBank:WP_001165127.1;Name=WP_001165127.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462494.1;locus_tag=C9E97_RS13305;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_001165127.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	65030	67072	.	-	.	ID=gene-C9E97_RS13310;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=C9E97_RS13310;old_locus_tag=C9E97_13600
NZ_PYKA01000097.1	Protein Homology	CDS	65030	67072	.	-	0	ID=cds-WP_000184178.1;Parent=gene-C9E97_RS13310;Dbxref=GenBank:WP_000184178.1;Name=WP_000184178.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1;locus_tag=C9E97_RS13310;product=oligopeptidase A;protein_id=WP_000184178.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	67235	67888	.	-	.	ID=gene-C9E97_RS13315;Name=C9E97_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13315;old_locus_tag=C9E97_13605
NZ_PYKA01000097.1	Protein Homology	CDS	67235	67888	.	-	0	ID=cds-WP_000469192.1;Parent=gene-C9E97_RS13315;Dbxref=GenBank:WP_000469192.1;Name=WP_000469192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000469196.1;locus_tag=C9E97_RS13315;product=hypothetical protein;protein_id=WP_000469192.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	68166	68609	.	+	.	ID=gene-C9E97_RS13320;Name=C9E97_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13320;old_locus_tag=C9E97_13610
NZ_PYKA01000097.1	Protein Homology	CDS	68166	68609	.	+	0	ID=cds-WP_000209571.1;Parent=gene-C9E97_RS13320;Dbxref=GenBank:WP_000209571.1;Name=WP_000209571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000209569.1;locus_tag=C9E97_RS13320;product=hypothetical protein;protein_id=WP_000209571.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	68730	69572	.	+	.	ID=gene-C9E97_RS13325;Name=C9E97_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13325;old_locus_tag=C9E97_13615
NZ_PYKA01000097.1	Protein Homology	CDS	68730	69572	.	+	0	ID=cds-WP_000954235.1;Parent=gene-C9E97_RS13325;Dbxref=GenBank:WP_000954235.1;Name=WP_000954235.1;Ontology_term=GO:0015976,GO:0070475,GO:0003723,GO:0008988,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=carbon utilization|0015976||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462497.1;locus_tag=C9E97_RS13325;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_000954235.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	69677	71029	.	+	.	ID=gene-C9E97_RS13330;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=C9E97_RS13330;old_locus_tag=C9E97_13620
NZ_PYKA01000097.1	Protein Homology	CDS	69677	71029	.	+	0	ID=cds-WP_017441621.1;Parent=gene-C9E97_RS13330;Dbxref=GenBank:WP_017441621.1;Name=WP_017441621.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=C9E97_RS13330;product=glutathione-disulfide reductase;protein_id=WP_017441621.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	71076	72119	.	-	.	ID=gene-C9E97_RS13335;Name=fraE;gbkey=Gene;gene=fraE;gene_biotype=protein_coding;locus_tag=C9E97_RS13335;old_locus_tag=C9E97_13625
NZ_PYKA01000097.1	Protein Homology	CDS	71076	72119	.	-	0	ID=cds-WP_023232290.1;Parent=gene-C9E97_RS13335;Dbxref=GenBank:WP_023232290.1;Name=WP_023232290.1;gbkey=CDS;gene=fraE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=C9E97_RS13335;product=fructose-asparagine asparaginase;protein_id=WP_023232290.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	72178	73497	.	-	.	ID=gene-C9E97_RS13340;Name=C9E97_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13340;old_locus_tag=C9E97_13630
NZ_PYKA01000097.1	Protein Homology	CDS	72178	73497	.	-	0	ID=cds-WP_000498935.1;Parent=gene-C9E97_RS13340;Dbxref=GenBank:WP_000498935.1;Name=WP_000498935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=C9E97_RS13340;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=WP_000498935.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	73551	74396	.	-	.	ID=gene-C9E97_RS13345;Name=fraD;gbkey=Gene;gene=fraD;gene_biotype=protein_coding;locus_tag=C9E97_RS13345;old_locus_tag=C9E97_13635
NZ_PYKA01000097.1	Protein Homology	CDS	73551	74396	.	-	0	ID=cds-WP_023232291.1;Parent=gene-C9E97_RS13345;Dbxref=GenBank:WP_023232291.1;Name=WP_023232291.1;gbkey=CDS;gene=fraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462501.1;locus_tag=C9E97_RS13345;product=fructose-aspartate kinase;protein_id=WP_023232291.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	74460	75437	.	-	.	ID=gene-C9E97_RS13350;Name=fraB;gbkey=Gene;gene=fraB;gene_biotype=protein_coding;locus_tag=C9E97_RS13350;old_locus_tag=C9E97_13640
NZ_PYKA01000097.1	Protein Homology	CDS	74460	75437	.	-	0	ID=cds-WP_077248388.1;Parent=gene-C9E97_RS13350;Dbxref=GenBank:WP_077248388.1;Name=WP_077248388.1;gbkey=CDS;gene=fraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462502.1;locus_tag=C9E97_RS13350;product=6-phosphofructose-aspartate deglycase;protein_id=WP_077248388.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	75613	76332	.	-	.	ID=gene-C9E97_RS13355;Name=C9E97_RS13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13355;old_locus_tag=C9E97_13645
NZ_PYKA01000097.1	Protein Homology	CDS	75613	76332	.	-	0	ID=cds-WP_000572568.1;Parent=gene-C9E97_RS13355;Dbxref=GenBank:WP_000572568.1;Name=WP_000572568.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462503.1;locus_tag=C9E97_RS13355;product=GntR family transcriptional regulator;protein_id=WP_000572568.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	76659	78308	.	+	.	ID=gene-C9E97_RS13360;Name=C9E97_RS13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13360;old_locus_tag=C9E97_13650
NZ_PYKA01000097.1	Protein Homology	CDS	76659	78308	.	+	0	ID=cds-WP_000934257.1;Parent=gene-C9E97_RS13360;Dbxref=GenBank:WP_000934257.1;Name=WP_000934257.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462504.1;locus_tag=C9E97_RS13360;product=alpha%2Calpha-trehalase;protein_id=WP_000934257.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	78321	79910	.	-	.	ID=gene-C9E97_RS13365;Name=C9E97_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13365;old_locus_tag=C9E97_13655
NZ_PYKA01000097.1	Protein Homology	CDS	78321	79910	.	-	0	ID=cds-WP_023232293.1;Parent=gene-C9E97_RS13365;Dbxref=GenBank:WP_023232293.1;Name=WP_023232293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=C9E97_RS13365;product=STY4199 family HEPN domain-containing protein;protein_id=WP_023232293.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	80191	80547	.	+	.	ID=gene-C9E97_RS13370;Name=C9E97_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13370;old_locus_tag=C9E97_13660
NZ_PYKA01000097.1	Protein Homology	CDS	80191	80547	.	+	0	ID=cds-WP_001120249.1;Parent=gene-C9E97_RS13370;Dbxref=GenBank:WP_001120249.1;Name=WP_001120249.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462506.1;locus_tag=C9E97_RS13370;product=glycoside hydrolase family protein;protein_id=WP_001120249.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	80553	81155	.	-	.	ID=gene-C9E97_RS13375;Name=C9E97_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13375;old_locus_tag=C9E97_13665
NZ_PYKA01000097.1	Protein Homology	CDS	80553	81155	.	-	0	ID=cds-WP_001196084.1;Parent=gene-C9E97_RS13375;Dbxref=GenBank:WP_001196084.1;Name=WP_001196084.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462507.1;locus_tag=C9E97_RS13375;product=helix-turn-helix transcriptional regulator;protein_id=WP_001196084.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	81525	81695	.	+	.	ID=gene-C9E97_RS23490;Name=C9E97_RS23490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23490
NZ_PYKA01000097.1	GeneMarkS-2+	CDS	81525	81695	.	+	0	ID=cds-WP_153246886.1;Parent=gene-C9E97_RS23490;Dbxref=GenBank:WP_153246886.1;Name=WP_153246886.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E97_RS23490;product=hypothetical protein;protein_id=WP_153246886.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	81786	82685	.	+	.	ID=gene-C9E97_RS13385;Name=C9E97_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13385;old_locus_tag=C9E97_13675
NZ_PYKA01000097.1	Protein Homology	CDS	81786	82685	.	+	0	ID=cds-WP_167850411.1;Parent=gene-C9E97_RS13385;Dbxref=GenBank:WP_167850411.1;Name=WP_167850411.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462508.1;locus_tag=C9E97_RS13385;product=LysR family transcriptional regulator;protein_id=WP_167850411.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	82758	83786	.	+	.	ID=gene-C9E97_RS13390;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=C9E97_RS13390;old_locus_tag=C9E97_13680
NZ_PYKA01000097.1	Protein Homology	CDS	82758	83786	.	+	0	ID=cds-WP_000191231.1;Parent=gene-C9E97_RS13390;Dbxref=GenBank:WP_000191231.1;Name=WP_000191231.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462509.1;locus_tag=C9E97_RS13390;product=inner membrane protein YhjD;protein_id=WP_000191231.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	84137	85459	.	+	.	ID=gene-C9E97_RS13395;Name=C9E97_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13395;old_locus_tag=C9E97_13685
NZ_PYKA01000097.1	Protein Homology	CDS	84137	85459	.	+	0	ID=cds-WP_079897585.1;Parent=gene-C9E97_RS13395;Dbxref=GenBank:WP_079897585.1;Name=WP_079897585.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462510.1;locus_tag=C9E97_RS13395;product=MFS transporter;protein_id=WP_079897585.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	85499	87559	.	-	.	ID=gene-C9E97_RS13400;Name=C9E97_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13400;old_locus_tag=C9E97_13690
NZ_PYKA01000097.1	Protein Homology	CDS	85499	87559	.	-	0	ID=cds-WP_115408920.1;Parent=gene-C9E97_RS13400;Dbxref=GenBank:WP_115408920.1;Name=WP_115408920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=C9E97_RS13400;product=AsmA family protein;protein_id=WP_115408920.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	87669	88436	.	-	.	ID=gene-C9E97_RS13405;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=C9E97_RS13405;old_locus_tag=C9E97_13695
NZ_PYKA01000097.1	Protein Homology	CDS	87669	88436	.	-	0	ID=cds-WP_000595626.1;Parent=gene-C9E97_RS13405;Dbxref=GenBank:WP_000595626.1;Name=WP_000595626.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462512.1;locus_tag=C9E97_RS13405;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_000595626.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	88665	89594	.	+	.	ID=gene-C9E97_RS13410;Name=C9E97_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13410;old_locus_tag=C9E97_13700
NZ_PYKA01000097.1	Protein Homology	CDS	88665	89594	.	+	0	ID=cds-WP_135369454.1;Parent=gene-C9E97_RS13410;Dbxref=GenBank:WP_135369454.1;Name=WP_135369454.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462513.1;locus_tag=C9E97_RS13410;product=sugar kinase;protein_id=WP_135369454.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	89648	91135	.	-	.	ID=gene-C9E97_RS13415;Name=C9E97_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13415;old_locus_tag=C9E97_13705
NZ_PYKA01000097.1	Protein Homology	CDS	89648	91135	.	-	0	ID=cds-WP_123220466.1;Parent=gene-C9E97_RS13415;Dbxref=GenBank:WP_123220466.1;Name=WP_123220466.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462514.1;locus_tag=C9E97_RS13415;product=M16 family metallopeptidase;protein_id=WP_123220466.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	91355	92641	.	-	.	ID=gene-C9E97_RS13420;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=C9E97_RS13420;old_locus_tag=C9E97_13710
NZ_PYKA01000097.1	Protein Homology	CDS	91355	92641	.	-	0	ID=cds-WP_000858228.1;Parent=gene-C9E97_RS13420;Dbxref=GenBank:WP_000858228.1;Name=WP_000858228.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462515.1;locus_tag=C9E97_RS13420;product=C4-dicarboxylate transporter DctC;protein_id=WP_000858228.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	92799	94805	.	-	.	ID=gene-C9E97_RS13425;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=C9E97_RS13425;old_locus_tag=C9E97_13715
NZ_PYKA01000097.1	Protein Homology	CDS	92799	94805	.	-	0	ID=cds-WP_001266361.1;Parent=gene-C9E97_RS13425;Dbxref=GenBank:WP_001266361.1;Name=WP_001266361.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266355.1;locus_tag=C9E97_RS13425;product=biofilm formation regulator HmsP;protein_id=WP_001266361.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	94979	98521	.	-	.	ID=gene-C9E97_RS13435;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=C9E97_RS13435;old_locus_tag=C9E97_13725
NZ_PYKA01000097.1	Protein Homology	CDS	94979	98521	.	-	0	ID=cds-WP_135369453.1;Parent=gene-C9E97_RS13435;Dbxref=GenBank:WP_135369453.1;Name=WP_135369453.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=C9E97_RS13435;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_135369453.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	98503	99612	.	-	.	ID=gene-C9E97_RS13440;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=C9E97_RS13440;old_locus_tag=C9E97_13730
NZ_PYKA01000097.1	Protein Homology	CDS	98503	99612	.	-	0	ID=cds-WP_135369452.1;Parent=gene-C9E97_RS13440;Dbxref=GenBank:WP_135369452.1;Name=WP_135369452.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462518.1;locus_tag=C9E97_RS13440;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_135369452.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	99616	101916	.	-	.	ID=gene-C9E97_RS13445;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=C9E97_RS13445;old_locus_tag=C9E97_13735
NZ_PYKA01000097.1	Protein Homology	CDS	99616	101916	.	-	0	ID=cds-WP_135369451.1;Parent=gene-C9E97_RS13445;Dbxref=GenBank:WP_135369451.1;Name=WP_135369451.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462519.1;locus_tag=C9E97_RS13445;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_135369451.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	101927	104551	.	-	.	ID=gene-C9E97_RS13450;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=C9E97_RS13450;old_locus_tag=C9E97_13740
NZ_PYKA01000097.1	Protein Homology	CDS	101927	104551	.	-	0	ID=cds-WP_001275342.1;Parent=gene-C9E97_RS13450;Dbxref=GenBank:WP_001275342.1;Name=WP_001275342.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462520.1;locus_tag=C9E97_RS13450;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_001275342.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	104548	105300	.	-	.	ID=gene-C9E97_RS13455;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=C9E97_RS13455;old_locus_tag=C9E97_13745
NZ_PYKA01000097.1	Protein Homology	CDS	104548	105300	.	-	0	ID=cds-WP_000996115.1;Parent=gene-C9E97_RS13455;Dbxref=GenBank:WP_000996115.1;Name=WP_000996115.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462521.1;locus_tag=C9E97_RS13455;product=cellulose biosynthesis protein BcsQ;protein_id=WP_000996115.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	105301	105504	.	-	.	ID=gene-C9E97_RS13460;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=C9E97_RS13460;old_locus_tag=C9E97_13750
NZ_PYKA01000097.1	Protein Homology	CDS	105301	105504	.	-	0	ID=cds-WP_000282616.1;Parent=gene-C9E97_RS13460;Dbxref=GenBank:WP_000282616.1;Name=WP_000282616.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462522.1;locus_tag=C9E97_RS13460;product=cellulose biosynthesis protein BcsR;protein_id=WP_000282616.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	105749	107320	.	+	.	ID=gene-C9E97_RS13465;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=C9E97_RS13465;old_locus_tag=C9E97_13755
NZ_PYKA01000097.1	Protein Homology	CDS	105749	107320	.	+	0	ID=cds-WP_001205771.1;Parent=gene-C9E97_RS13465;Dbxref=GenBank:WP_001205771.1;Name=WP_001205771.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462523.1;locus_tag=C9E97_RS13465;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WP_001205771.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	107317	107508	.	+	.	ID=gene-C9E97_RS13470;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=C9E97_RS13470;old_locus_tag=C9E97_13760
NZ_PYKA01000097.1	Protein Homology	CDS	107317	107508	.	+	0	ID=cds-WP_000988321.1;Parent=gene-C9E97_RS13470;Dbxref=GenBank:WP_000988321.1;Name=WP_000988321.1;Ontology_term=GO:0052324;gbkey=CDS;gene=bcsF;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462524.1;locus_tag=C9E97_RS13470;product=cellulose biosynthesis protein BcsF;protein_id=WP_000988321.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	107505	109184	.	+	.	ID=gene-C9E97_RS13475;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=C9E97_RS13475;old_locus_tag=C9E97_13765
NZ_PYKA01000097.1	Protein Homology	CDS	107505	109184	.	+	0	ID=cds-WP_000192022.1;Parent=gene-C9E97_RS13475;Dbxref=GenBank:WP_000192022.1;Name=WP_000192022.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462525.1;locus_tag=C9E97_RS13475;product=cellulose biosynthesis protein BcsG;protein_id=WP_000192022.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	109266	109373	.	-	.	ID=gene-C9E97_RS13480;Name=C9E97_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13480;old_locus_tag=C9E97_13770
NZ_PYKA01000097.1	Protein Homology	CDS	109266	109373	.	-	0	ID=cds-WP_001537650.1;Parent=gene-C9E97_RS13480;Dbxref=GenBank:WP_001537650.1;Name=WP_001537650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=C9E97_RS13480;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001537650.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	pseudogene	109746	109898	.	+	.	ID=gene-C9E97_RS23800;Name=C9E97_RS23800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23800;partial=true;pseudo=true;start_range=.,109746
NZ_PYKA01000097.1	Protein Homology	CDS	109746	109898	.	+	0	ID=cds-C9E97_RS23800;Parent=gene-C9E97_RS23800;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: protein motif:HMM:NF013237.6;locus_tag=C9E97_RS23800;partial=true;product=PLP-dependent transferase;pseudo=true;start_range=.,109746;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	110016	111314	.	+	.	ID=gene-C9E97_RS13490;Name=C9E97_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13490;old_locus_tag=C9E97_13780
NZ_PYKA01000097.1	Protein Homology	CDS	110016	111314	.	+	0	ID=cds-WP_001150175.1;Parent=gene-C9E97_RS13490;Dbxref=GenBank:WP_001150175.1;Name=WP_001150175.1;Ontology_term=GO:0003333;gbkey=CDS;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462527.1;locus_tag=C9E97_RS13490;product=aromatic amino acid transport family protein;protein_id=WP_001150175.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	111415	112428	.	-	.	ID=gene-C9E97_RS13495;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=C9E97_RS13495;old_locus_tag=C9E97_13785
NZ_PYKA01000097.1	Protein Homology	CDS	111415	112428	.	-	0	ID=cds-WP_135369450.1;Parent=gene-C9E97_RS13495;Dbxref=GenBank:WP_135369450.1;Name=WP_135369450.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462528.1;locus_tag=C9E97_RS13495;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_135369450.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	112425	113408	.	-	.	ID=gene-C9E97_RS13500;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=C9E97_RS13500;old_locus_tag=C9E97_13790
NZ_PYKA01000097.1	Protein Homology	CDS	112425	113408	.	-	0	ID=cds-WP_001196509.1;Parent=gene-C9E97_RS13500;Dbxref=GenBank:WP_001196509.1;Name=WP_001196509.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462529.1;locus_tag=C9E97_RS13500;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_001196509.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	113419	114321	.	-	.	ID=gene-C9E97_RS13505;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=C9E97_RS13505;old_locus_tag=C9E97_13795
NZ_PYKA01000097.1	Protein Homology	CDS	113419	114321	.	-	0	ID=cds-WP_000084690.1;Parent=gene-C9E97_RS13505;Dbxref=GenBank:WP_000084690.1;Name=WP_000084690.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=C9E97_RS13505;product=dipeptide ABC transporter permease DppC;protein_id=WP_000084690.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	114331	115350	.	-	.	ID=gene-C9E97_RS13510;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=C9E97_RS13510;old_locus_tag=C9E97_13800
NZ_PYKA01000097.1	Protein Homology	CDS	114331	115350	.	-	0	ID=cds-WP_000938843.1;Parent=gene-C9E97_RS13510;Dbxref=GenBank:WP_000938843.1;Name=WP_000938843.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=C9E97_RS13510;product=dipeptide ABC transporter permease DppB;protein_id=WP_000938843.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	115507	117114	.	-	.	ID=gene-C9E97_RS13515;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=C9E97_RS13515;old_locus_tag=C9E97_13805
NZ_PYKA01000097.1	Protein Homology	CDS	115507	117114	.	-	0	ID=cds-WP_000028047.1;Parent=gene-C9E97_RS13515;Dbxref=GenBank:WP_000028047.1;Name=WP_000028047.1;Ontology_term=GO:0042938,GO:0071916,GO:0030288;gbkey=CDS;gene=dppA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=C9E97_RS13515;product=dipeptide ABC transporter periplasmic-binding protein DppA;protein_id=WP_000028047.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	117670	118995	.	-	.	ID=gene-C9E97_RS13520;Name=C9E97_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13520;old_locus_tag=C9E97_13810
NZ_PYKA01000097.1	Protein Homology	CDS	117670	118995	.	-	0	ID=cds-WP_042948508.1;Parent=gene-C9E97_RS13520;Dbxref=GenBank:WP_042948508.1;Name=WP_042948508.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=C9E97_RS13520;product=uracil-xanthine permease family protein;protein_id=WP_042948508.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	119053	120177	.	-	.	ID=gene-C9E97_RS13525;Name=C9E97_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13525;old_locus_tag=C9E97_13815
NZ_PYKA01000097.1	Protein Homology	CDS	119053	120177	.	-	0	ID=cds-WP_001748889.1;Parent=gene-C9E97_RS13525;Dbxref=GenBank:WP_001748889.1;Name=WP_001748889.1;Ontology_term=GO:0004062;gbkey=CDS;go_function=aryl sulfotransferase activity|0004062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462534.1;locus_tag=C9E97_RS13525;product=aryl-sulfate sulfotransferase;protein_id=WP_001748889.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	120327	121334	.	+	.	ID=gene-C9E97_RS13530;Name=C9E97_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13530;old_locus_tag=C9E97_13820
NZ_PYKA01000097.1	Protein Homology	CDS	120327	121334	.	+	0	ID=cds-WP_135369449.1;Parent=gene-C9E97_RS13530;Dbxref=GenBank:WP_135369449.1;Name=WP_135369449.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462535.1;locus_tag=C9E97_RS13530;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_135369449.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	121325	121443	.	-	.	ID=gene-C9E97_RS13535;Name=C9E97_RS13535;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E97_RS13535;old_locus_tag=C9E97_13825
NZ_PYKA01000097.1	cmsearch	ncRNA	121325	121443	.	-	.	ID=rna-C9E97_RS13535;Parent=gene-C9E97_RS13535;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS13535;product=RtT sRNA
NZ_PYKA01000097.1	cmsearch	exon	121325	121443	.	-	.	ID=exon-C9E97_RS13535-1;Parent=rna-C9E97_RS13535;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS13535;product=RtT sRNA
NZ_PYKA01000097.1	RefSeq	gene	121478	121554	.	-	.	ID=gene-C9E97_RS13540;Name=C9E97_RS13540;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS13540;old_locus_tag=C9E97_13830
NZ_PYKA01000097.1	tRNAscan-SE	tRNA	121478	121554	.	-	.	ID=rna-C9E97_RS13540;Parent=gene-C9E97_RS13540;anticodon=(pos:complement(121518..121520));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS13540;product=tRNA-Pro
NZ_PYKA01000097.1	tRNAscan-SE	exon	121478	121554	.	-	.	ID=exon-C9E97_RS13540-1;Parent=rna-C9E97_RS13540;anticodon=(pos:complement(121518..121520));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS13540;product=tRNA-Pro
NZ_PYKA01000097.1	RefSeq	gene	121645	123336	.	-	.	ID=gene-C9E97_RS13545;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=C9E97_RS13545;old_locus_tag=C9E97_13835
NZ_PYKA01000097.1	Protein Homology	CDS	121645	123336	.	-	0	ID=cds-WP_135369448.1;Parent=gene-C9E97_RS13545;Dbxref=GenBank:WP_135369448.1;Name=WP_135369448.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462536.1;locus_tag=C9E97_RS13545;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_135369448.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	123567	124271	.	-	.	ID=gene-C9E97_RS13550;Name=C9E97_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13550;old_locus_tag=C9E97_13840
NZ_PYKA01000097.1	Protein Homology	CDS	123567	124271	.	-	0	ID=cds-WP_000637073.1;Parent=gene-C9E97_RS13550;Dbxref=GenBank:WP_000637073.1;Name=WP_000637073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462542.1;locus_tag=C9E97_RS13550;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000637073.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	124428	125009	.	+	.	ID=gene-C9E97_RS13555;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=C9E97_RS13555;old_locus_tag=C9E97_13845
NZ_PYKA01000097.1	Protein Homology	CDS	124428	125009	.	+	0	ID=cds-WP_001188420.1;Parent=gene-C9E97_RS13555;Dbxref=GenBank:WP_001188420.1;Name=WP_001188420.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462543.1;locus_tag=C9E97_RS13555;product=DNA-3-methyladenine glycosylase I;protein_id=WP_001188420.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	124987	125427	.	+	.	ID=gene-C9E97_RS13560;Name=C9E97_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13560;old_locus_tag=C9E97_13850
NZ_PYKA01000097.1	Protein Homology	CDS	124987	125427	.	+	0	ID=cds-WP_000619902.1;Parent=gene-C9E97_RS13560;Dbxref=GenBank:WP_000619902.1;Name=WP_000619902.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462544.1;locus_tag=C9E97_RS13560;product=N-acetyltransferase;protein_id=WP_000619902.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	125396	127729	.	-	.	ID=gene-C9E97_RS13565;Name=C9E97_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13565;old_locus_tag=C9E97_13855
NZ_PYKA01000097.1	Protein Homology	CDS	125396	127729	.	-	0	ID=cds-WP_135369447.1;Parent=gene-C9E97_RS13565;Dbxref=GenBank:WP_135369447.1;Name=WP_135369447.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462545.1;locus_tag=C9E97_RS13565;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_135369447.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	127882	128544	.	+	.	ID=gene-C9E97_RS13570;Name=C9E97_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13570;old_locus_tag=C9E97_13860
NZ_PYKA01000097.1	Protein Homology	CDS	127882	128544	.	+	0	ID=cds-WP_000747548.1;Parent=gene-C9E97_RS13570;Dbxref=GenBank:WP_000747548.1;Name=WP_000747548.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462546.1;locus_tag=C9E97_RS13570;product=OmpA family lipoprotein;protein_id=WP_000747548.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	128763	129737	.	+	.	ID=gene-C9E97_RS13575;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=C9E97_RS13575;old_locus_tag=C9E97_13865
NZ_PYKA01000097.1	Protein Homology	CDS	128763	129737	.	+	0	ID=cds-WP_135369446.1;Parent=gene-C9E97_RS13575;Dbxref=GenBank:WP_135369446.1;Name=WP_135369446.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462547.1;locus_tag=C9E97_RS13575;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_135369446.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	129787	130497	.	-	.	ID=gene-C9E97_RS13580;Name=C9E97_RS13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13580;old_locus_tag=C9E97_13870
NZ_PYKA01000097.1	Protein Homology	CDS	129787	130497	.	-	0	ID=cds-WP_000190524.1;Parent=gene-C9E97_RS13580;Dbxref=GenBank:WP_000190524.1;Name=WP_000190524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462548.1;locus_tag=C9E97_RS13580;product=DUF3053 domain-containing protein;protein_id=WP_000190524.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	130936	131226	.	+	.	ID=gene-C9E97_RS13585;Name=C9E97_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13585;old_locus_tag=C9E97_13875
NZ_PYKA01000097.1	Protein Homology	CDS	130936	131226	.	+	0	ID=cds-WP_000455790.1;Parent=gene-C9E97_RS13585;Dbxref=GenBank:WP_000455790.1;Name=WP_000455790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462549.1;locus_tag=C9E97_RS13585;product=HTH-type transcriptional regulator;protein_id=WP_000455790.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	131514	131726	.	+	.	ID=gene-C9E97_RS13590;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=C9E97_RS13590;old_locus_tag=C9E97_13880
NZ_PYKA01000097.1	Protein Homology	CDS	131514	131726	.	+	0	ID=cds-WP_000014594.1;Parent=gene-C9E97_RS13590;Dbxref=GenBank:WP_000014594.1;Name=WP_000014594.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=C9E97_RS13590;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000014594.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	131910	132449	.	+	.	ID=gene-C9E97_RS13595;Name=cueP;gbkey=Gene;gene=cueP;gene_biotype=protein_coding;locus_tag=C9E97_RS13595;old_locus_tag=C9E97_13885
NZ_PYKA01000097.1	Protein Homology	CDS	131910	132449	.	+	0	ID=cds-WP_135369445.1;Parent=gene-C9E97_RS13595;Dbxref=GenBank:WP_135369445.1;Name=WP_135369445.1;gbkey=CDS;gene=cueP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462551.1;locus_tag=C9E97_RS13595;product=copper-binding periplasmic metallochaperone CueP;protein_id=WP_135369445.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	132500	134569	.	-	.	ID=gene-C9E97_RS13600;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=C9E97_RS13600;old_locus_tag=C9E97_13890
NZ_PYKA01000097.1	Protein Homology	CDS	132500	134569	.	-	0	ID=cds-WP_001291738.1;Parent=gene-C9E97_RS13600;Dbxref=GenBank:WP_001291738.1;Name=WP_001291738.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=C9E97_RS13600;product=glycine--tRNA ligase subunit beta;protein_id=WP_001291738.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	134579	135490	.	-	.	ID=gene-C9E97_RS13605;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=C9E97_RS13605;old_locus_tag=C9E97_13895
NZ_PYKA01000097.1	Protein Homology	CDS	134579	135490	.	-	0	ID=cds-WP_001168551.1;Parent=gene-C9E97_RS13605;Dbxref=GenBank:WP_001168551.1;Name=WP_001168551.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462556.1;locus_tag=C9E97_RS13605;product=glycine--tRNA ligase subunit alpha;protein_id=WP_001168551.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	135629	135931	.	-	.	ID=gene-C9E97_RS13610;Name=C9E97_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13610;old_locus_tag=C9E97_13900
NZ_PYKA01000097.1	Protein Homology	CDS	135629	135931	.	-	0	ID=cds-WP_000605590.1;Parent=gene-C9E97_RS13610;Dbxref=GenBank:WP_000605590.1;Name=WP_000605590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462557.1;locus_tag=C9E97_RS13610;product=YsaB family lipoprotein;protein_id=WP_000605590.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	136097	137092	.	+	.	ID=gene-C9E97_RS13620;Name=C9E97_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13620;old_locus_tag=C9E97_13910
NZ_PYKA01000097.1	Protein Homology	CDS	136097	137092	.	+	0	ID=cds-WP_135369444.1;Parent=gene-C9E97_RS13620;Dbxref=GenBank:WP_135369444.1;Name=WP_135369444.1;Ontology_term=GO:0016413,GO:0016747;gbkey=CDS;go_function=O-acetyltransferase activity|0016413||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462558.1;locus_tag=C9E97_RS13620;product=acyltransferase;protein_id=WP_135369444.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	137113	137466	.	-	.	ID=gene-C9E97_RS13625;Name=C9E97_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13625;old_locus_tag=C9E97_13915
NZ_PYKA01000097.1	Protein Homology	CDS	137113	137466	.	-	0	ID=cds-WP_001635944.1;Parent=gene-C9E97_RS13625;Dbxref=GenBank:WP_001635944.1;Name=WP_001635944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462559.1;locus_tag=C9E97_RS13625;product=YiaA/YiaB family protein;protein_id=WP_001635944.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	137641	139095	.	-	.	ID=gene-C9E97_RS13630;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=C9E97_RS13630;old_locus_tag=C9E97_13920
NZ_PYKA01000097.1	Protein Homology	CDS	137641	139095	.	-	0	ID=cds-WP_135369443.1;Parent=gene-C9E97_RS13630;Dbxref=GenBank:WP_135369443.1;Name=WP_135369443.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462560.1;locus_tag=C9E97_RS13630;product=xylulokinase;protein_id=WP_135369443.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	139195	140517	.	-	.	ID=gene-C9E97_RS13635;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=C9E97_RS13635;old_locus_tag=C9E97_13925
NZ_PYKA01000097.1	Protein Homology	CDS	139195	140517	.	-	0	ID=cds-WP_001149561.1;Parent=gene-C9E97_RS13635;Dbxref=GenBank:WP_001149561.1;Name=WP_001149561.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462561.1;locus_tag=C9E97_RS13635;product=xylose isomerase;protein_id=WP_001149561.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	140880	142058	.	+	.	ID=gene-C9E97_RS13645;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=C9E97_RS13645;old_locus_tag=C9E97_13935
NZ_PYKA01000097.1	Protein Homology	CDS	140880	142058	.	+	0	ID=cds-WP_000459824.1;Parent=gene-C9E97_RS13645;Dbxref=GenBank:WP_000459824.1;Name=WP_000459824.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462562.1;locus_tag=C9E97_RS13645;product=D-xylose utilization transcriptional activator XylR;protein_id=WP_000459824.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	142119	142943	.	-	.	ID=gene-C9E97_RS13650;Name=C9E97_RS13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13650;old_locus_tag=C9E97_13940
NZ_PYKA01000097.1	Protein Homology	CDS	142119	142943	.	-	0	ID=cds-WP_001575119.1;Parent=gene-C9E97_RS13650;Dbxref=GenBank:WP_001575119.1;Name=WP_001575119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462563.1;locus_tag=C9E97_RS13650;product=protein bax;protein_id=WP_001575119.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	143259	145286	.	+	.	ID=gene-C9E97_RS13655;Name=C9E97_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13655;old_locus_tag=C9E97_13950
NZ_PYKA01000097.1	Protein Homology	CDS	143259	145286	.	+	0	ID=cds-WP_135369442.1;Parent=gene-C9E97_RS13655;Dbxref=GenBank:WP_135369442.1;Name=WP_135369442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462564.1;locus_tag=C9E97_RS13655;product=alpha-amylase;protein_id=WP_135369442.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	145460	146710	.	+	.	ID=gene-C9E97_RS13660;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=C9E97_RS13660;old_locus_tag=C9E97_13955
NZ_PYKA01000097.1	Protein Homology	CDS	145460	146710	.	+	0	ID=cds-WP_000144381.1;Parent=gene-C9E97_RS13660;Dbxref=GenBank:WP_000144381.1;Name=WP_000144381.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462565.1;locus_tag=C9E97_RS13660;product=valine--pyruvate transaminase;protein_id=WP_000144381.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	146747	147220	.	-	.	ID=gene-C9E97_RS13665;Name=C9E97_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13665;old_locus_tag=C9E97_13960
NZ_PYKA01000097.1	Protein Homology	CDS	146747	147220	.	-	0	ID=cds-WP_001078812.1;Parent=gene-C9E97_RS13665;Dbxref=GenBank:WP_001078812.1;Name=WP_001078812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462566.1;locus_tag=C9E97_RS13665;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001078812.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	147337	148143	.	-	.	ID=gene-C9E97_RS13670;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=C9E97_RS13670;old_locus_tag=C9E97_13965
NZ_PYKA01000097.1	Protein Homology	CDS	147337	148143	.	-	0	ID=cds-WP_001748894.1;Parent=gene-C9E97_RS13670;Dbxref=GenBank:WP_001748894.1;Name=WP_001748894.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462567.1;locus_tag=C9E97_RS13670;product=IclR family transcriptional regulator YiaJ;protein_id=WP_001748894.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	148373	149371	.	+	.	ID=gene-C9E97_RS13675;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=C9E97_RS13675;old_locus_tag=C9E97_13970
NZ_PYKA01000097.1	Protein Homology	CDS	148373	149371	.	+	0	ID=cds-WP_000869012.1;Parent=gene-C9E97_RS13675;Dbxref=GenBank:WP_000869012.1;Name=WP_000869012.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462568.1;locus_tag=C9E97_RS13675;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_000869012.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	149383	149847	.	+	.	ID=gene-C9E97_RS13680;Name=C9E97_RS13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13680;old_locus_tag=C9E97_13975
NZ_PYKA01000097.1	Protein Homology	CDS	149383	149847	.	+	0	ID=cds-WP_000576102.1;Parent=gene-C9E97_RS13680;Dbxref=GenBank:WP_000576102.1;Name=WP_000576102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462569.1;locus_tag=C9E97_RS13680;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000576102.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	149871	150812	.	+	.	ID=gene-C9E97_RS13685;Name=C9E97_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13685;old_locus_tag=C9E97_13980
NZ_PYKA01000097.1	Protein Homology	CDS	149871	150812	.	+	0	ID=cds-WP_001748895.1;Parent=gene-C9E97_RS13685;Dbxref=GenBank:WP_001748895.1;Name=WP_001748895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466038.1;locus_tag=C9E97_RS13685;product=DUF4862 family protein;protein_id=WP_001748895.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	150941	151414	.	+	.	ID=gene-C9E97_RS13690;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=C9E97_RS13690;old_locus_tag=C9E97_13985
NZ_PYKA01000097.1	Protein Homology	CDS	150941	151414	.	+	0	ID=cds-WP_000832316.1;Parent=gene-C9E97_RS13690;Dbxref=GenBank:WP_000832316.1;Name=WP_000832316.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaM;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462571.1;locus_tag=C9E97_RS13690;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WP_000832316.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	151417	152694	.	+	.	ID=gene-C9E97_RS13695;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=C9E97_RS13695;old_locus_tag=C9E97_13990
NZ_PYKA01000097.1	Protein Homology	CDS	151417	152694	.	+	0	ID=cds-WP_000301822.1;Parent=gene-C9E97_RS13695;Dbxref=GenBank:WP_000301822.1;Name=WP_000301822.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaN;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462572.1;locus_tag=C9E97_RS13695;product=2%2C3-diketo-L-gulonate TRAP transporter large permease YiaN;protein_id=WP_000301822.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	152706	153692	.	+	.	ID=gene-C9E97_RS13700;Name=yiaO;gbkey=Gene;gene=yiaO;gene_biotype=protein_coding;locus_tag=C9E97_RS13700;old_locus_tag=C9E97_13995
NZ_PYKA01000097.1	Protein Homology	CDS	152706	153692	.	+	0	ID=cds-WP_000766340.1;Parent=gene-C9E97_RS13700;Dbxref=GenBank:WP_000766340.1;Name=WP_000766340.1;gbkey=CDS;gene=yiaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462573.1;locus_tag=C9E97_RS13700;product=2%2C3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO;protein_id=WP_000766340.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	153696	155192	.	+	.	ID=gene-C9E97_RS13705;Name=C9E97_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13705;old_locus_tag=C9E97_14000
NZ_PYKA01000097.1	Protein Homology	CDS	153696	155192	.	+	0	ID=cds-WP_080185536.1;Parent=gene-C9E97_RS13705;Dbxref=GenBank:WP_080185536.1;Name=WP_080185536.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462574.1;locus_tag=C9E97_RS13705;product=FGGY-family carbohydrate kinase;protein_id=WP_080185536.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	155189	155851	.	+	.	ID=gene-C9E97_RS13710;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=C9E97_RS13710;old_locus_tag=C9E97_14005
NZ_PYKA01000097.1	Protein Homology	CDS	155189	155851	.	+	0	ID=cds-WP_000089527.1;Parent=gene-C9E97_RS13710;Dbxref=GenBank:WP_000089527.1;Name=WP_000089527.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462575.1;locus_tag=C9E97_RS13710;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000089527.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	155844	156704	.	+	.	ID=gene-C9E97_RS13715;Name=C9E97_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13715;old_locus_tag=C9E97_14010
NZ_PYKA01000097.1	Protein Homology	CDS	155844	156704	.	+	0	ID=cds-WP_023241061.1;Parent=gene-C9E97_RS13715;Dbxref=GenBank:WP_023241061.1;Name=WP_023241061.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462576.1;locus_tag=C9E97_RS13715;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_023241061.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	156698	157393	.	+	.	ID=gene-C9E97_RS13720;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=C9E97_RS13720;old_locus_tag=C9E97_14015
NZ_PYKA01000097.1	Protein Homology	CDS	156698	157393	.	+	0	ID=cds-WP_135369441.1;Parent=gene-C9E97_RS13720;Dbxref=GenBank:WP_135369441.1;Name=WP_135369441.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462577.1;locus_tag=C9E97_RS13720;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_135369441.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	157554	158369	.	-	.	ID=gene-C9E97_RS13725;Name=C9E97_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13725;old_locus_tag=C9E97_14020
NZ_PYKA01000097.1	Protein Homology	CDS	157554	158369	.	-	0	ID=cds-WP_135369440.1;Parent=gene-C9E97_RS13725;Dbxref=GenBank:WP_135369440.1;Name=WP_135369440.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462578.1;locus_tag=C9E97_RS13725;product=AraC family transcriptional regulator;protein_id=WP_135369440.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	158633	160588	.	+	.	ID=gene-C9E97_RS13730;Name=C9E97_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13730;old_locus_tag=C9E97_14025
NZ_PYKA01000097.1	Protein Homology	CDS	158633	160588	.	+	0	ID=cds-WP_001650977.1;Parent=gene-C9E97_RS13730;Dbxref=GenBank:WP_001650977.1;Name=WP_001650977.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462579.1;locus_tag=C9E97_RS13730;product=glycoside hydrolase family 127 protein;protein_id=WP_001650977.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	160706	162244	.	-	.	ID=gene-C9E97_RS13735;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=C9E97_RS13735;old_locus_tag=C9E97_14030
NZ_PYKA01000097.1	Protein Homology	CDS	160706	162244	.	-	0	ID=cds-WP_000183988.1;Parent=gene-C9E97_RS13735;Dbxref=GenBank:WP_000183988.1;Name=WP_000183988.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462580.1;locus_tag=C9E97_RS13735;product=aldehyde dehydrogenase AldB;protein_id=WP_000183988.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	162413	163294	.	+	.	ID=gene-C9E97_RS13740;Name=C9E97_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13740;old_locus_tag=C9E97_14035
NZ_PYKA01000097.1	Protein Homology	CDS	162413	163294	.	+	0	ID=cds-WP_001188269.1;Parent=gene-C9E97_RS13740;Dbxref=GenBank:WP_001188269.1;Name=WP_001188269.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954677.1;locus_tag=C9E97_RS13740;product=ROK family protein;protein_id=WP_001188269.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	163569	165419	.	-	.	ID=gene-C9E97_RS13745;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=C9E97_RS13745;old_locus_tag=C9E97_14040
NZ_PYKA01000097.1	Protein Homology	CDS	163569	165419	.	-	0	ID=cds-WP_001608726.1;Parent=gene-C9E97_RS13745;Dbxref=GenBank:WP_001608726.1;Name=WP_001608726.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462582.1;locus_tag=C9E97_RS13745;product=selenocysteine-specific translation elongation factor;protein_id=WP_001608726.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	165416	166807	.	-	.	ID=gene-C9E97_RS13750;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=C9E97_RS13750;old_locus_tag=C9E97_14045
NZ_PYKA01000097.1	Protein Homology	CDS	165416	166807	.	-	0	ID=cds-WP_103133379.1;Parent=gene-C9E97_RS13750;Dbxref=GenBank:WP_103133379.1;Name=WP_103133379.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462583.1;locus_tag=C9E97_RS13750;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_103133379.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	166906	167514	.	-	.	ID=gene-C9E97_RS13755;Name=C9E97_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13755;old_locus_tag=C9E97_14050
NZ_PYKA01000097.1	Protein Homology	CDS	166906	167514	.	-	0	ID=cds-WP_000766688.1;Parent=gene-C9E97_RS13755;Dbxref=GenBank:WP_000766688.1;Name=WP_000766688.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462584.1;locus_tag=C9E97_RS13755;product=glutathione S-transferase;protein_id=WP_000766688.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	167990	169906	.	+	.	ID=gene-C9E97_RS13760;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=C9E97_RS13760;old_locus_tag=C9E97_14055
NZ_PYKA01000097.1	Protein Homology	CDS	167990	169906	.	+	0	ID=cds-WP_000093287.1;Parent=gene-C9E97_RS13760;Dbxref=GenBank:WP_000093287.1;Name=WP_000093287.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462585.1;locus_tag=C9E97_RS13760;product=PTS mannitol transporter subunit IICBA;protein_id=WP_000093287.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	170127	171275	.	+	.	ID=gene-C9E97_RS13765;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=C9E97_RS13765;old_locus_tag=C9E97_14060
NZ_PYKA01000097.1	Protein Homology	CDS	170127	171275	.	+	0	ID=cds-WP_023250378.1;Parent=gene-C9E97_RS13765;Dbxref=GenBank:WP_023250378.1;Name=WP_023250378.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462586.1;locus_tag=C9E97_RS13765;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_023250378.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	171272	171862	.	+	.	ID=gene-C9E97_RS13770;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=C9E97_RS13770;old_locus_tag=C9E97_14065
NZ_PYKA01000097.1	Protein Homology	CDS	171272	171862	.	+	0	ID=cds-WP_000193201.1;Parent=gene-C9E97_RS13770;Dbxref=GenBank:WP_000193201.1;Name=WP_000193201.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462587.1;locus_tag=C9E97_RS13770;product=mannitol operon repressor MtlR;protein_id=WP_000193201.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	171872	172081	.	-	.	ID=gene-C9E97_RS13775;Name=C9E97_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13775;old_locus_tag=C9E97_14070
NZ_PYKA01000097.1	Protein Homology	CDS	171872	172081	.	-	0	ID=cds-WP_001062558.1;Parent=gene-C9E97_RS13775;Dbxref=GenBank:WP_001062558.1;Name=WP_001062558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462588.1;locus_tag=C9E97_RS13775;product=hypothetical protein;protein_id=WP_001062558.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	172372	172734	.	+	.	ID=gene-C9E97_RS13780;Name=C9E97_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13780;old_locus_tag=C9E97_14075
NZ_PYKA01000097.1	Protein Homology	CDS	172372	172734	.	+	0	ID=cds-WP_000665687.1;Parent=gene-C9E97_RS13780;Dbxref=GenBank:WP_000665687.1;Name=WP_000665687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462589.1;locus_tag=C9E97_RS13780;product=YibL family ribosome-associated protein;protein_id=WP_000665687.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	gene	173222	173905	.	+	.	ID=gene-C9E97_RS13785;Name=C9E97_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13785;old_locus_tag=C9E97_14085
NZ_PYKA01000097.1	Protein Homology	CDS	173222	173905	.	+	0	ID=cds-WP_135369059.1;Parent=gene-C9E97_RS13785;Dbxref=GenBank:WP_135369059.1;Name=WP_135369059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462590.1;locus_tag=C9E97_RS13785;product=DUF3251 domain-containing protein;protein_id=WP_135369059.1;transl_table=11
NZ_PYKA01000097.1	RefSeq	pseudogene	173949	175807	.	+	.	ID=gene-C9E97_RS13790;Name=sadA;end_range=175807,.;gbkey=Gene;gene=sadA;gene_biotype=pseudogene;locus_tag=C9E97_RS13790;old_locus_tag=C9E97_14090;partial=true;pseudo=true
NZ_PYKA01000097.1	Protein Homology	CDS	173949	175807	.	+	0	ID=cds-C9E97_RS13790;Parent=gene-C9E97_RS13790;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=175807,.;gbkey=CDS;gene=sadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462591.1;locus_tag=C9E97_RS13790;partial=true;product=trimeric autotransporter adhesin SadA;pseudo=true;transl_table=11
##sequence-region NZ_PYKA01000079.1 1 45653
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000079.1	RefSeq	region	1	45653	.	+	.	ID=NZ_PYKA01000079.1:1..45653;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000079.1	RefSeq	gene	62	137	.	+	.	ID=gene-C9E97_RS11145;Name=C9E97_RS11145;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS11145;old_locus_tag=C9E97_11410
NZ_PYKA01000079.1	tRNAscan-SE	tRNA	62	137	.	+	.	ID=rna-C9E97_RS11145;Parent=gene-C9E97_RS11145;anticodon=(pos:95..97);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS11145;product=tRNA-Thr
NZ_PYKA01000079.1	tRNAscan-SE	exon	62	137	.	+	.	ID=exon-C9E97_RS11145-1;Parent=rna-C9E97_RS11145;anticodon=(pos:95..97);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS11145;product=tRNA-Thr
NZ_PYKA01000079.1	RefSeq	gene	177	292	.	+	.	ID=gene-C9E97_RS11150;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9E97_RS11150;old_locus_tag=C9E97_11415
NZ_PYKA01000079.1	cmsearch	rRNA	177	292	.	+	.	ID=rna-C9E97_RS11150;Parent=gene-C9E97_RS11150;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS11150;product=5S ribosomal RNA
NZ_PYKA01000079.1	cmsearch	exon	177	292	.	+	.	ID=exon-C9E97_RS11150-1;Parent=rna-C9E97_RS11150;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS11150;product=5S ribosomal RNA
NZ_PYKA01000079.1	RefSeq	gene	1075	1296	.	-	.	ID=gene-C9E97_RS11155;Name=C9E97_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11155;old_locus_tag=C9E97_11420
NZ_PYKA01000079.1	Protein Homology	CDS	1075	1296	.	-	0	ID=cds-WP_000825645.1;Parent=gene-C9E97_RS11155;Dbxref=GenBank:WP_000825645.1;Name=WP_000825645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462302.1;locus_tag=C9E97_RS11155;product=membrane protein;protein_id=WP_000825645.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	1533	4646	.	-	.	ID=gene-C9E97_RS11160;Name=C9E97_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11160;old_locus_tag=C9E97_11425
NZ_PYKA01000079.1	Protein Homology	CDS	1533	4646	.	-	0	ID=cds-WP_001273283.1;Parent=gene-C9E97_RS11160;Dbxref=GenBank:WP_001273283.1;Name=WP_001273283.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=C9E97_RS11160;product=efflux RND transporter permease subunit;protein_id=WP_001273283.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	4658	5815	.	-	.	ID=gene-C9E97_RS11165;Name=C9E97_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11165;old_locus_tag=C9E97_11430
NZ_PYKA01000079.1	Protein Homology	CDS	4658	5815	.	-	0	ID=cds-WP_000160383.1;Parent=gene-C9E97_RS11165;Dbxref=GenBank:WP_000160383.1;Name=WP_000160383.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=C9E97_RS11165;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_000160383.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	6229	6891	.	+	.	ID=gene-C9E97_RS11170;Name=envR;gbkey=Gene;gene=envR;gene_biotype=protein_coding;locus_tag=C9E97_RS11170;old_locus_tag=C9E97_11435
NZ_PYKA01000079.1	Protein Homology	CDS	6229	6891	.	+	0	ID=cds-WP_001085725.1;Parent=gene-C9E97_RS11170;Dbxref=GenBank:WP_001085725.1;Name=WP_001085725.1;gbkey=CDS;gene=envR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462299.1;locus_tag=C9E97_RS11170;product=acrEF/envCD operon transcriptional regulator;protein_id=WP_001085725.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	6894	8993	.	-	.	ID=gene-C9E97_RS11175;Name=C9E97_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11175;old_locus_tag=C9E97_11440
NZ_PYKA01000079.1	Protein Homology	CDS	6894	8993	.	-	0	ID=cds-WP_023250386.1;Parent=gene-C9E97_RS11175;Dbxref=GenBank:WP_023250386.1;Name=WP_023250386.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462298.1;locus_tag=C9E97_RS11175;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_023250386.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	9144	9308	.	-	.	ID=gene-C9E97_RS11180;Name=C9E97_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11180;old_locus_tag=C9E97_11445
NZ_PYKA01000079.1	Protein Homology	CDS	9144	9308	.	-	0	ID=cds-WP_000620015.1;Parent=gene-C9E97_RS11180;Dbxref=GenBank:WP_000620015.1;Name=WP_000620015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462297.1;locus_tag=C9E97_RS11180;product=DUF2556 family protein;protein_id=WP_000620015.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	9391	10275	.	-	.	ID=gene-C9E97_RS11185;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=C9E97_RS11185;old_locus_tag=C9E97_11450
NZ_PYKA01000079.1	Protein Homology	CDS	9391	10275	.	-	0	ID=cds-WP_000642611.1;Parent=gene-C9E97_RS11185;Dbxref=GenBank:WP_000642611.1;Name=WP_000642611.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462296.1;locus_tag=C9E97_RS11185;product=adenine-specific DNA-methyltransferase;protein_id=WP_000642611.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	10361	10657	.	-	.	ID=gene-C9E97_RS11190;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=C9E97_RS11190;old_locus_tag=C9E97_11455
NZ_PYKA01000079.1	Protein Homology	CDS	10361	10657	.	-	0	ID=cds-WP_000462905.1;Parent=gene-C9E97_RS11190;Dbxref=GenBank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=C9E97_RS11190;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	10683	11648	.	-	.	ID=gene-C9E97_RS11195;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=C9E97_RS11195;old_locus_tag=C9E97_11460
NZ_PYKA01000079.1	Protein Homology	CDS	10683	11648	.	-	0	ID=cds-WP_001219664.1;Parent=gene-C9E97_RS11195;Dbxref=GenBank:WP_001219664.1;Name=WP_001219664.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=C9E97_RS11195;product=tRNA dihydrouridine synthase DusB;protein_id=WP_001219664.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	12309	13190	.	-	.	ID=gene-C9E97_RS11205;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=C9E97_RS11205;old_locus_tag=C9E97_11465
NZ_PYKA01000079.1	Protein Homology	CDS	12309	13190	.	-	0	ID=cds-WP_001145849.1;Parent=gene-C9E97_RS11205;Dbxref=GenBank:WP_001145849.1;Name=WP_001145849.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462293.1;locus_tag=C9E97_RS11205;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_001145849.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	13202	14653	.	-	.	ID=gene-C9E97_RS11210;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=C9E97_RS11210;old_locus_tag=C9E97_11470
NZ_PYKA01000079.1	Protein Homology	CDS	13202	14653	.	-	0	ID=cds-WP_001175681.1;Parent=gene-C9E97_RS11210;Dbxref=GenBank:WP_001175681.1;Name=WP_001175681.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462292.1;locus_tag=C9E97_RS11210;product=sodium/pantothenate symporter;protein_id=WP_001175681.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	14643	14885	.	-	.	ID=gene-C9E97_RS11215;Name=C9E97_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11215;old_locus_tag=C9E97_11475
NZ_PYKA01000079.1	Protein Homology	CDS	14643	14885	.	-	0	ID=cds-WP_000340018.1;Parent=gene-C9E97_RS11215;Dbxref=GenBank:WP_000340018.1;Name=WP_000340018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462291.1;locus_tag=C9E97_RS11215;product=YhdT family protein;protein_id=WP_000340018.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	14994	16343	.	-	.	ID=gene-C9E97_RS11220;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=C9E97_RS11220;old_locus_tag=C9E97_11480
NZ_PYKA01000079.1	Protein Homology	CDS	14994	16343	.	-	0	ID=cds-WP_000884627.1;Parent=gene-C9E97_RS11220;Dbxref=GenBank:WP_000884627.1;Name=WP_000884627.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=C9E97_RS11220;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_000884627.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	16354	16824	.	-	.	ID=gene-C9E97_RS11225;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=C9E97_RS11225;old_locus_tag=C9E97_11485
NZ_PYKA01000079.1	Protein Homology	CDS	16354	16824	.	-	0	ID=cds-WP_000354626.1;Parent=gene-C9E97_RS11225;Dbxref=GenBank:WP_000354626.1;Name=WP_000354626.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462289.1;locus_tag=C9E97_RS11225;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354626.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	17217	17816	.	-	.	ID=gene-C9E97_RS11230;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=C9E97_RS11230;old_locus_tag=C9E97_11490
NZ_PYKA01000079.1	Protein Homology	CDS	17217	17816	.	-	0	ID=cds-WP_001241496.1;Parent=gene-C9E97_RS11230;Dbxref=GenBank:WP_001241496.1;Name=WP_001241496.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462288.1;locus_tag=C9E97_RS11230;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_001241496.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	17817	18821	.	-	.	ID=gene-C9E97_RS11235;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=C9E97_RS11235;old_locus_tag=C9E97_11495
NZ_PYKA01000079.1	Protein Homology	CDS	17817	18821	.	-	0	ID=cds-WP_000723876.1;Parent=gene-C9E97_RS11235;Dbxref=GenBank:WP_000723876.1;Name=WP_000723876.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462287.1;locus_tag=C9E97_RS11235;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_000723876.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	18934	19908	.	-	.	ID=gene-C9E97_RS11240;Name=C9E97_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11240;old_locus_tag=C9E97_11500
NZ_PYKA01000079.1	Protein Homology	CDS	18934	19908	.	-	0	ID=cds-WP_115408942.1;Parent=gene-C9E97_RS11240;Dbxref=GenBank:WP_115408942.1;Name=WP_115408942.1;Ontology_term=GO:0004022,GO:0008270,GO:0030554;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462286.1;locus_tag=C9E97_RS11240;product=MDR family oxidoreductase;protein_id=WP_115408942.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	20112	22052	.	+	.	ID=gene-C9E97_RS11245;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=C9E97_RS11245;old_locus_tag=C9E97_11505
NZ_PYKA01000079.1	Protein Homology	CDS	20112	22052	.	+	0	ID=cds-WP_001241381.1;Parent=gene-C9E97_RS11245;Dbxref=GenBank:WP_001241381.1;Name=WP_001241381.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462285.1;locus_tag=C9E97_RS11245;product=RNase E specificity factor CsrD;protein_id=WP_001241381.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	22360	23403	.	+	.	ID=gene-C9E97_RS11255;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=C9E97_RS11255;old_locus_tag=C9E97_11520
NZ_PYKA01000079.1	Protein Homology	CDS	22360	23403	.	+	0	ID=cds-WP_000913396.1;Parent=gene-C9E97_RS11255;Dbxref=GenBank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=C9E97_RS11255;product=rod shape-determining protein MreB;protein_id=WP_000913396.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	23468	24520	.	+	.	ID=gene-C9E97_RS11260;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=C9E97_RS11260;old_locus_tag=C9E97_11525
NZ_PYKA01000079.1	Protein Homology	CDS	23468	24520	.	+	0	ID=cds-WP_000802536.1;Parent=gene-C9E97_RS11260;Dbxref=GenBank:WP_000802536.1;Name=WP_000802536.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462283.1;locus_tag=C9E97_RS11260;product=rod shape-determining protein MreC;protein_id=WP_000802536.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	24523	25011	.	+	.	ID=gene-C9E97_RS11265;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=C9E97_RS11265;old_locus_tag=C9E97_11530
NZ_PYKA01000079.1	Protein Homology	CDS	24523	25011	.	+	0	ID=cds-WP_000179403.1;Parent=gene-C9E97_RS11265;Dbxref=GenBank:WP_000179403.1;Name=WP_000179403.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=C9E97_RS11265;product=rod shape-determining protein MreD;protein_id=WP_000179403.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	25020	25613	.	+	.	ID=gene-C9E97_RS11270;Name=C9E97_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11270;old_locus_tag=C9E97_11535
NZ_PYKA01000079.1	Protein Homology	CDS	25020	25613	.	+	0	ID=cds-WP_000210303.1;Parent=gene-C9E97_RS11270;Dbxref=GenBank:WP_000210303.1;Name=WP_000210303.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462281.1;locus_tag=C9E97_RS11270;product=Maf family protein;protein_id=WP_000210303.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	25603	27072	.	+	.	ID=gene-C9E97_RS11275;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=C9E97_RS11275;old_locus_tag=C9E97_11540
NZ_PYKA01000079.1	Protein Homology	CDS	25603	27072	.	+	0	ID=cds-WP_000123188.1;Parent=gene-C9E97_RS11275;Dbxref=GenBank:WP_000123188.1;Name=WP_000123188.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=C9E97_RS11275;product=ribonuclease G;protein_id=WP_000123188.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	27179	30979	.	+	.	ID=gene-C9E97_RS11280;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=C9E97_RS11280;old_locus_tag=C9E97_11545
NZ_PYKA01000079.1	Protein Homology	CDS	27179	30979	.	+	0	ID=cds-WP_135369770.1;Parent=gene-C9E97_RS11280;Dbxref=GenBank:WP_135369770.1;Name=WP_135369770.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462279.1;locus_tag=C9E97_RS11280;product=AsmA2 domain-containing protein YhdP;protein_id=WP_135369770.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	31124	32569	.	+	.	ID=gene-C9E97_RS11285;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=C9E97_RS11285;old_locus_tag=C9E97_11550
NZ_PYKA01000079.1	Protein Homology	CDS	31124	32569	.	+	0	ID=cds-WP_000055940.1;Parent=gene-C9E97_RS11285;Dbxref=GenBank:WP_000055940.1;Name=WP_000055940.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=C9E97_RS11285;product=metalloprotease TldD;protein_id=WP_000055940.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	32691	33620	.	-	.	ID=gene-C9E97_RS11290;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=C9E97_RS11290;old_locus_tag=C9E97_11555
NZ_PYKA01000079.1	Protein Homology	CDS	32691	33620	.	-	0	ID=cds-WP_000440300.1;Parent=gene-C9E97_RS11290;Dbxref=GenBank:WP_000440300.1;Name=WP_000440300.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462277.1;locus_tag=C9E97_RS11290;product=HTH-type transcriptional activator AaeR;protein_id=WP_000440300.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	33802	34005	.	+	.	ID=gene-C9E97_RS11295;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=C9E97_RS11295;old_locus_tag=C9E97_11560
NZ_PYKA01000079.1	Protein Homology	CDS	33802	34005	.	+	0	ID=cds-WP_000051840.1;Parent=gene-C9E97_RS11295;Dbxref=GenBank:WP_000051840.1;Name=WP_000051840.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=C9E97_RS11295;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_000051840.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	34013	34945	.	+	.	ID=gene-C9E97_RS11300;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=C9E97_RS11300;old_locus_tag=C9E97_11565
NZ_PYKA01000079.1	Protein Homology	CDS	34013	34945	.	+	0	ID=cds-WP_000855134.1;Parent=gene-C9E97_RS11300;Dbxref=GenBank:WP_000855134.1;Name=WP_000855134.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462275.1;locus_tag=C9E97_RS11300;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_000855134.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	34951	36918	.	+	.	ID=gene-C9E97_RS11305;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=C9E97_RS11305;old_locus_tag=C9E97_11570
NZ_PYKA01000079.1	Protein Homology	CDS	34951	36918	.	+	0	ID=cds-WP_000510913.1;Parent=gene-C9E97_RS11305;Dbxref=GenBank:WP_000510913.1;Name=WP_000510913.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462274.1;locus_tag=C9E97_RS11305;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_000510913.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	37090	37362	.	+	.	ID=gene-C9E97_RS11310;Name=C9E97_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11310;old_locus_tag=C9E97_11575
NZ_PYKA01000079.1	Protein Homology	CDS	37090	37362	.	+	0	ID=cds-WP_001103887.1;Parent=gene-C9E97_RS11310;Dbxref=GenBank:WP_001103887.1;Name=WP_001103887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462273.1;locus_tag=C9E97_RS11310;product=barstar family protein;protein_id=WP_001103887.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	37423	37689	.	-	.	ID=gene-C9E97_RS11315;Name=yhcN-B;gbkey=Gene;gene=yhcN-B;gene_biotype=protein_coding;locus_tag=C9E97_RS11315;old_locus_tag=C9E97_11580
NZ_PYKA01000079.1	Protein Homology	CDS	37423	37689	.	-	0	ID=cds-WP_000853277.1;Parent=gene-C9E97_RS11315;Dbxref=GenBank:WP_000853277.1;Name=WP_000853277.1;gbkey=CDS;gene=yhcN-B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462272.1;locus_tag=C9E97_RS11315;product=DUF1471 family stress response protein YhcN-B;protein_id=WP_000853277.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	37793	38056	.	-	.	ID=gene-C9E97_RS11320;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=C9E97_RS11320;old_locus_tag=C9E97_11585
NZ_PYKA01000079.1	Protein Homology	CDS	37793	38056	.	-	0	ID=cds-WP_000695695.1;Parent=gene-C9E97_RS11320;Dbxref=GenBank:WP_000695695.1;Name=WP_000695695.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462271.1;locus_tag=C9E97_RS11320;product=peroxide/acid stress response protein YhcN;protein_id=WP_000695695.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	38421	38891	.	-	.	ID=gene-C9E97_RS11325;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=C9E97_RS11325;old_locus_tag=C9E97_11590
NZ_PYKA01000079.1	Protein Homology	CDS	38421	38891	.	-	0	ID=cds-WP_001257852.1;Parent=gene-C9E97_RS11325;Dbxref=GenBank:WP_001257852.1;Name=WP_001257852.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=C9E97_RS11325;product=transcriptional regulator ArgR;protein_id=WP_001257852.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	39306	40244	.	+	.	ID=gene-C9E97_RS11330;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=C9E97_RS11330;old_locus_tag=C9E97_11595
NZ_PYKA01000079.1	Protein Homology	CDS	39306	40244	.	+	0	ID=cds-WP_000861586.1;Parent=gene-C9E97_RS11330;Dbxref=GenBank:WP_000861586.1;Name=WP_000861586.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=C9E97_RS11330;product=malate dehydrogenase;protein_id=WP_000861586.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	40364	40993	.	+	.	ID=gene-C9E97_RS11335;Name=C9E97_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11335;old_locus_tag=C9E97_11600
NZ_PYKA01000079.1	Protein Homology	CDS	40364	40993	.	+	0	ID=cds-WP_000723776.1;Parent=gene-C9E97_RS11335;Dbxref=GenBank:WP_000723776.1;Name=WP_000723776.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462268.1;locus_tag=C9E97_RS11335;product=GntR family transcriptional regulator;protein_id=WP_000723776.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	40980	41645	.	+	.	ID=gene-C9E97_RS11340;Name=C9E97_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11340;old_locus_tag=C9E97_11605
NZ_PYKA01000079.1	Protein Homology	CDS	40980	41645	.	+	0	ID=cds-WP_001171581.1;Parent=gene-C9E97_RS11340;Dbxref=GenBank:WP_001171581.1;Name=WP_001171581.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462267.1;locus_tag=C9E97_RS11340;product=GntR family transcriptional regulator;protein_id=WP_001171581.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	41856	43124	.	+	.	ID=gene-C9E97_RS11345;Name=C9E97_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11345;old_locus_tag=C9E97_11610
NZ_PYKA01000079.1	Protein Homology	CDS	41856	43124	.	+	0	ID=cds-WP_000433390.1;Parent=gene-C9E97_RS11345;Dbxref=GenBank:WP_000433390.1;Name=WP_000433390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462266.1;locus_tag=C9E97_RS11345;product=SLC13 family permease;protein_id=WP_000433390.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	43157	44056	.	+	.	ID=gene-C9E97_RS11350;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=C9E97_RS11350;old_locus_tag=C9E97_11615
NZ_PYKA01000079.1	Protein Homology	CDS	43157	44056	.	+	0	ID=cds-WP_000045349.1;Parent=gene-C9E97_RS11350;Dbxref=GenBank:WP_000045349.1;Name=WP_000045349.1;Ontology_term=GO:0008730;gbkey=CDS;gene=ttdA;go_function=L(+)-tartrate dehydratase activity|0008730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462265.1;locus_tag=C9E97_RS11350;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_000045349.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	44056	44673	.	+	.	ID=gene-C9E97_RS11355;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=C9E97_RS11355;old_locus_tag=C9E97_11620
NZ_PYKA01000079.1	Protein Homology	CDS	44056	44673	.	+	0	ID=cds-WP_000162405.1;Parent=gene-C9E97_RS11355;Dbxref=GenBank:WP_000162405.1;Name=WP_000162405.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462264.1;locus_tag=C9E97_RS11355;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_000162405.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	gene	44830	45072	.	+	.	ID=gene-C9E97_RS11360;Name=C9E97_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11360;old_locus_tag=C9E97_11625
NZ_PYKA01000079.1	Protein Homology	CDS	44830	45072	.	+	0	ID=cds-WP_000180122.1;Parent=gene-C9E97_RS11360;Dbxref=GenBank:WP_000180122.1;Name=WP_000180122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000128597.1;locus_tag=C9E97_RS11360;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_000180122.1;transl_table=11
NZ_PYKA01000079.1	RefSeq	pseudogene	45089	45653	.	+	.	ID=gene-C9E97_RS11365;Name=C9E97_RS11365;end_range=45653,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS11365;old_locus_tag=C9E97_11630;partial=true;pseudo=true
NZ_PYKA01000079.1	Protein Homology	CDS	45089	45653	.	+	0	ID=cds-C9E97_RS11365;Parent=gene-C9E97_RS11365;Note=catalyzes the formation of pyruvate from oxaloacetate%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=45653,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9E97_RS11365;partial=true;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;pseudo=true;transl_table=11
##sequence-region NZ_PYKA01000041.1 1 45203
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000041.1	RefSeq	region	1	45203	.	+	.	ID=NZ_PYKA01000041.1:1..45203;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000041.1	RefSeq	gene	298	948	.	+	.	ID=gene-C9E97_RS04965;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=C9E97_RS04965;old_locus_tag=C9E97_05095
NZ_PYKA01000041.1	Protein Homology	CDS	298	948	.	+	0	ID=cds-WP_000481517.1;Parent=gene-C9E97_RS04965;Dbxref=GenBank:WP_000481517.1;Name=WP_000481517.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460113.1;locus_tag=C9E97_RS04965;product=biofilm master transcriptional regulator CsgD;protein_id=WP_000481517.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	953	1348	.	+	.	ID=gene-C9E97_RS04970;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=C9E97_RS04970;old_locus_tag=C9E97_05100
NZ_PYKA01000041.1	Protein Homology	CDS	953	1348	.	+	0	ID=cds-WP_000833307.1;Parent=gene-C9E97_RS04970;Dbxref=GenBank:WP_000833307.1;Name=WP_000833307.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460112.1;locus_tag=C9E97_RS04970;product=curli production assembly/transport protein CsgE;protein_id=WP_000833307.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	1375	1791	.	+	.	ID=gene-C9E97_RS04975;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=C9E97_RS04975;old_locus_tag=C9E97_05105
NZ_PYKA01000041.1	Protein Homology	CDS	1375	1791	.	+	0	ID=cds-WP_001264073.1;Parent=gene-C9E97_RS04975;Dbxref=GenBank:WP_001264073.1;Name=WP_001264073.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460111.1;locus_tag=C9E97_RS04975;product=curli production assembly/transport protein CsgF;protein_id=WP_001264073.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	1818	2651	.	+	.	ID=gene-C9E97_RS04980;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=C9E97_RS04980;old_locus_tag=C9E97_05110
NZ_PYKA01000041.1	Protein Homology	CDS	1818	2651	.	+	0	ID=cds-WP_001137620.1;Parent=gene-C9E97_RS04980;Dbxref=GenBank:WP_001137620.1;Name=WP_001137620.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460110.1;locus_tag=C9E97_RS04980;product=curli production assembly/transport protein CsgG;protein_id=WP_001137620.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	2835	3293	.	+	.	ID=gene-C9E97_RS04990;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=C9E97_RS04990;old_locus_tag=C9E97_05120
NZ_PYKA01000041.1	Protein Homology	CDS	2835	3293	.	+	0	ID=cds-WP_000502119.1;Parent=gene-C9E97_RS04990;Dbxref=GenBank:WP_000502119.1;Name=WP_000502119.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=C9E97_RS04990;product=IS200/IS605-like element IS200F family transposase;protein_id=WP_000502119.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	3401	3883	.	-	.	ID=gene-C9E97_RS05000;Name=C9E97_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05000;old_locus_tag=C9E97_05130
NZ_PYKA01000041.1	Protein Homology	CDS	3401	3883	.	-	0	ID=cds-WP_001546652.1;Parent=gene-C9E97_RS05000;Dbxref=GenBank:WP_001546652.1;Name=WP_001546652.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675581.1;locus_tag=C9E97_RS05000;product=DUF1097 domain-containing protein;protein_id=WP_001546652.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	3984	4538	.	-	.	ID=gene-C9E97_RS05005;Name=C9E97_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05005;old_locus_tag=C9E97_05135
NZ_PYKA01000041.1	Protein Homology	CDS	3984	4538	.	-	0	ID=cds-WP_001001883.1;Parent=gene-C9E97_RS05005;Dbxref=GenBank:WP_001001883.1;Name=WP_001001883.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460108.1;locus_tag=C9E97_RS05005;product=TorD/DmsD family molecular chaperone;protein_id=WP_001001883.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	4562	5299	.	-	.	ID=gene-C9E97_RS05010;Name=C9E97_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05010;old_locus_tag=C9E97_05140
NZ_PYKA01000041.1	Protein Homology	CDS	4562	5299	.	-	0	ID=cds-WP_000283643.1;Parent=gene-C9E97_RS05010;Dbxref=GenBank:WP_000283643.1;Name=WP_000283643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460107.1;locus_tag=C9E97_RS05010;product=phosphatase;protein_id=WP_000283643.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	5384	6322	.	-	.	ID=gene-C9E97_RS05015;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=C9E97_RS05015;old_locus_tag=C9E97_05145
NZ_PYKA01000041.1	Protein Homology	CDS	5384	6322	.	-	0	ID=cds-WP_000402551.1;Parent=gene-C9E97_RS05015;Dbxref=GenBank:WP_000402551.1;Name=WP_000402551.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460106.1;locus_tag=C9E97_RS05015;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_000402551.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	6558	6645	.	+	.	ID=gene-C9E97_RS05025;Name=C9E97_RS05025;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS05025;old_locus_tag=C9E97_05155
NZ_PYKA01000041.1	tRNAscan-SE	tRNA	6558	6645	.	+	.	ID=rna-C9E97_RS05025;Parent=gene-C9E97_RS05025;anticodon=(pos:6592..6594);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS05025;product=tRNA-Ser
NZ_PYKA01000041.1	tRNAscan-SE	exon	6558	6645	.	+	.	ID=exon-C9E97_RS05025-1;Parent=rna-C9E97_RS05025;anticodon=(pos:6592..6594);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS05025;product=tRNA-Ser
NZ_PYKA01000041.1	RefSeq	pseudogene	6894	6992	.	+	.	ID=gene-C9E97_RS23675;Name=C9E97_RS23675;end_range=6992,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23675;old_locus_tag=C9E97_05160;partial=true;pseudo=true;start_range=.,6894
NZ_PYKA01000041.1	Protein Homology	CDS	6894	6992	.	+	0	ID=cds-C9E97_RS23675;Parent=gene-C9E97_RS23675;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=6992,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001607533.1;locus_tag=C9E97_RS23675;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,6894;transl_table=11
NZ_PYKA01000041.1	RefSeq	pseudogene	7075	7191	.	+	.	ID=gene-C9E97_RS05035;Name=C9E97_RS05035;end_range=7191,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS05035;old_locus_tag=C9E97_05165;partial=true;pseudo=true
NZ_PYKA01000041.1	Protein Homology	CDS	7075	7191	.	+	0	ID=cds-C9E97_RS05035;Parent=gene-C9E97_RS05035;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=7191,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611504.1;locus_tag=C9E97_RS05035;partial=true;product=transposase;pseudo=true;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	7417	8433	.	-	.	ID=gene-C9E97_RS05040;Name=C9E97_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05040;old_locus_tag=C9E97_05170
NZ_PYKA01000041.1	Protein Homology	CDS	7417	8433	.	-	0	ID=cds-WP_135369060.1;Parent=gene-C9E97_RS05040;Dbxref=GenBank:WP_135369060.1;Name=WP_135369060.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032444102.1;locus_tag=C9E97_RS05040;product=IS110 family transposase;protein_id=WP_135369060.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	pseudogene	8503	8634	.	+	.	ID=gene-C9E97_RS05045;Name=C9E97_RS05045;end_range=8634,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS05045;old_locus_tag=C9E97_05175;partial=true;pseudo=true;start_range=.,8503
NZ_PYKA01000041.1	Protein Homology	CDS	8503	8634	.	+	0	ID=cds-C9E97_RS05045;Parent=gene-C9E97_RS05045;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=8634,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611496.1;locus_tag=C9E97_RS05045;partial=true;product=transposase;pseudo=true;start_range=.,8503;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	8894	9712	.	-	.	ID=gene-C9E97_RS05050;Name=C9E97_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05050;old_locus_tag=C9E97_05180
NZ_PYKA01000041.1	Protein Homology	CDS	8894	9712	.	-	0	ID=cds-WP_135369607.1;Parent=gene-C9E97_RS05050;Dbxref=GenBank:WP_135369607.1;Name=WP_135369607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176774.1;locus_tag=C9E97_RS05050;product=hypothetical protein;protein_id=WP_135369607.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	pseudogene	10194	10439	.	-	.	ID=gene-C9E97_RS23965;Name=C9E97_RS23965;end_range=10439,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23965;partial=true;pseudo=true
NZ_PYKA01000041.1	Protein Homology	CDS	10194	10439	.	-	0	ID=cds-C9E97_RS23965;Parent=gene-C9E97_RS23965;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=10439,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524936.1;locus_tag=C9E97_RS23965;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	10730	10819	.	-	.	ID=gene-C9E97_RS05065;Name=C9E97_RS05065;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS05065;old_locus_tag=C9E97_05195
NZ_PYKA01000041.1	tRNAscan-SE	tRNA	10730	10819	.	-	.	ID=rna-C9E97_RS05065;Parent=gene-C9E97_RS05065;anticodon=(pos:complement(10783..10785));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS05065;product=tRNA-Ser
NZ_PYKA01000041.1	tRNAscan-SE	exon	10730	10819	.	-	.	ID=exon-C9E97_RS05065-1;Parent=rna-C9E97_RS05065;anticodon=(pos:complement(10783..10785));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS05065;product=tRNA-Ser
NZ_PYKA01000041.1	RefSeq	gene	10908	11705	.	+	.	ID=gene-C9E97_RS05070;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=C9E97_RS05070;old_locus_tag=C9E97_05200
NZ_PYKA01000041.1	Protein Homology	CDS	10908	11705	.	+	0	ID=cds-WP_135369608.1;Parent=gene-C9E97_RS05070;Dbxref=GenBank:WP_135369608.1;Name=WP_135369608.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460951.1;locus_tag=C9E97_RS05070;product=DgsA anti-repressor MtfA;protein_id=WP_135369608.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	11806	11881	.	+	.	ID=gene-C9E97_RS05075;Name=C9E97_RS05075;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS05075;old_locus_tag=C9E97_05205
NZ_PYKA01000041.1	tRNAscan-SE	tRNA	11806	11881	.	+	.	ID=rna-C9E97_RS05075;Parent=gene-C9E97_RS05075;anticodon=(pos:11839..11841);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS05075;product=tRNA-Asn
NZ_PYKA01000041.1	tRNAscan-SE	exon	11806	11881	.	+	.	ID=exon-C9E97_RS05075-1;Parent=rna-C9E97_RS05075;anticodon=(pos:11839..11841);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS05075;product=tRNA-Asn
NZ_PYKA01000041.1	RefSeq	pseudogene	12049	12354	.	+	.	ID=gene-C9E97_RS05080;Name=C9E97_RS05080;end_range=12354,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS05080;old_locus_tag=C9E97_05210;partial=true;pseudo=true
NZ_PYKA01000041.1	Protein Homology	CDS	12049	12354	.	+	0	ID=cds-C9E97_RS05080;Parent=gene-C9E97_RS05080;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;end_range=12354,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=C9E97_RS05080;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	12776	12851	.	+	.	ID=gene-C9E97_RS05085;Name=C9E97_RS05085;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS05085;old_locus_tag=C9E97_05215
NZ_PYKA01000041.1	tRNAscan-SE	tRNA	12776	12851	.	+	.	ID=rna-C9E97_RS05085;Parent=gene-C9E97_RS05085;anticodon=(pos:12809..12811);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS05085;product=tRNA-Asn
NZ_PYKA01000041.1	tRNAscan-SE	exon	12776	12851	.	+	.	ID=exon-C9E97_RS05085-1;Parent=rna-C9E97_RS05085;anticodon=(pos:12809..12811);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS05085;product=tRNA-Asn
NZ_PYKA01000041.1	RefSeq	gene	13015	13488	.	+	.	ID=gene-C9E97_RS05090;Name=C9E97_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05090;old_locus_tag=C9E97_05220
NZ_PYKA01000041.1	Protein Homology	CDS	13015	13488	.	+	0	ID=cds-WP_023993346.1;Parent=gene-C9E97_RS05090;Dbxref=GenBank:WP_023993346.1;Name=WP_023993346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460952.1;locus_tag=C9E97_RS05090;product=protease;protein_id=WP_023993346.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	pseudogene	13965	14432	.	+	.	ID=gene-C9E97_RS05095;Name=C9E97_RS05095;end_range=14432,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS05095;old_locus_tag=C9E97_05225;partial=true;pseudo=true
NZ_PYKA01000041.1	Protein Homology	CDS	13965	14432	.	+	0	ID=cds-C9E97_RS05095;Parent=gene-C9E97_RS05095;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=14432,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517119.1;locus_tag=C9E97_RS05095;partial=true;product=phage integrase N-terminal domain-containing protein;pseudo=true;transl_table=11
NZ_PYKA01000041.1	RefSeq	pseudogene	14518	14796	.	+	.	ID=gene-C9E97_RS05100;Name=C9E97_RS05100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS05100;old_locus_tag=C9E97_05230;partial=true;pseudo=true;start_range=.,14518
NZ_PYKA01000041.1	Protein Homology	CDS	14518	14796	.	+	0	ID=cds-C9E97_RS05100;Parent=gene-C9E97_RS05100;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950586.1;locus_tag=C9E97_RS05100;partial=true;product=transposase;pseudo=true;start_range=.,14518;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	15480	17174	.	+	.	ID=gene-C9E97_RS05105;Name=C9E97_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05105;old_locus_tag=C9E97_05235
NZ_PYKA01000041.1	Protein Homology	CDS	15480	17174	.	+	0	ID=cds-WP_135369616.1;Parent=gene-C9E97_RS05105;Dbxref=GenBank:WP_135369616.1;Name=WP_135369616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460954.1;locus_tag=C9E97_RS05105;product=SEL1-like repeat protein;protein_id=WP_135369616.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	17231	18961	.	+	.	ID=gene-C9E97_RS05110;Name=C9E97_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05110;old_locus_tag=C9E97_05240
NZ_PYKA01000041.1	Protein Homology	CDS	17231	18961	.	+	0	ID=cds-WP_135369609.1;Parent=gene-C9E97_RS05110;Dbxref=GenBank:WP_135369609.1;Name=WP_135369609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460955.1;locus_tag=C9E97_RS05110;product=hypothetical protein;protein_id=WP_135369609.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	pseudogene	19019	19123	.	-	.	ID=gene-C9E97_RS05115;Name=C9E97_RS05115;end_range=19123,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS05115;old_locus_tag=C9E97_05245;partial=true;pseudo=true
NZ_PYKA01000041.1	Protein Homology	CDS	19019	19123	.	-	0	ID=cds-C9E97_RS05115;Parent=gene-C9E97_RS05115;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=19123,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=C9E97_RS05115;partial=true;product=DUF520 family protein;pseudo=true;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	19171	19344	.	+	.	ID=gene-C9E97_RS23445;Name=C9E97_RS23445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23445
NZ_PYKA01000041.1	Protein Homology	CDS	19171	19344	.	+	0	ID=cds-WP_000957535.1;Parent=gene-C9E97_RS23445;Dbxref=GenBank:WP_000957535.1;Name=WP_000957535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000957538.1;locus_tag=C9E97_RS23445;product=hypothetical protein;protein_id=WP_000957535.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	19870	21324	.	-	.	ID=gene-C9E97_RS05130;Name=C9E97_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05130;old_locus_tag=C9E97_05255
NZ_PYKA01000041.1	Protein Homology	CDS	19870	21324	.	-	0	ID=cds-WP_135369611.1;Parent=gene-C9E97_RS05130;Dbxref=GenBank:WP_135369611.1;Name=WP_135369611.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460956.1;locus_tag=C9E97_RS05130;product=AMP nucleosidase;protein_id=WP_135369611.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	21370	21531	.	+	.	ID=gene-C9E97_RS05135;Name=C9E97_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05135;old_locus_tag=C9E97_05260
NZ_PYKA01000041.1	Protein Homology	CDS	21370	21531	.	+	0	ID=cds-WP_023888257.1;Parent=gene-C9E97_RS05135;Dbxref=GenBank:WP_023888257.1;Name=WP_023888257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448416.1;locus_tag=C9E97_RS05135;product=hypothetical protein;protein_id=WP_023888257.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	21520	21846	.	-	.	ID=gene-C9E97_RS05140;Name=C9E97_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05140;old_locus_tag=C9E97_05265
NZ_PYKA01000041.1	Protein Homology	CDS	21520	21846	.	-	0	ID=cds-WP_000228159.1;Parent=gene-C9E97_RS05140;Dbxref=GenBank:WP_000228159.1;Name=WP_000228159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460958.1;locus_tag=C9E97_RS05140;product=DUF1493 family protein;protein_id=WP_000228159.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	21840	22304	.	-	.	ID=gene-C9E97_RS05145;Name=C9E97_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05145;old_locus_tag=C9E97_05270
NZ_PYKA01000041.1	Protein Homology	CDS	21840	22304	.	-	0	ID=cds-WP_000381834.1;Parent=gene-C9E97_RS05145;Dbxref=GenBank:WP_000381834.1;Name=WP_000381834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211098.1;locus_tag=C9E97_RS05145;product=STM2901 family protein;protein_id=WP_000381834.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	22724	22799	.	-	.	ID=gene-C9E97_RS05150;Name=C9E97_RS05150;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS05150;old_locus_tag=C9E97_05280
NZ_PYKA01000041.1	tRNAscan-SE	tRNA	22724	22799	.	-	.	ID=rna-C9E97_RS05150;Parent=gene-C9E97_RS05150;anticodon=(pos:complement(22764..22766));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS05150;product=tRNA-Asn
NZ_PYKA01000041.1	tRNAscan-SE	exon	22724	22799	.	-	.	ID=exon-C9E97_RS05150-1;Parent=rna-C9E97_RS05150;anticodon=(pos:complement(22764..22766));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS05150;product=tRNA-Asn
NZ_PYKA01000041.1	RefSeq	gene	22940	24397	.	-	.	ID=gene-C9E97_RS05155;Name=C9E97_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05155;old_locus_tag=C9E97_05285
NZ_PYKA01000041.1	Protein Homology	CDS	22940	24397	.	-	0	ID=cds-WP_001669456.1;Parent=gene-C9E97_RS05155;Dbxref=GenBank:WP_001669456.1;Name=WP_001669456.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460959.1;locus_tag=C9E97_RS05155;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=WP_001669456.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	24557	24632	.	+	.	ID=gene-C9E97_RS05160;Name=C9E97_RS05160;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS05160;old_locus_tag=C9E97_05290
NZ_PYKA01000041.1	tRNAscan-SE	tRNA	24557	24632	.	+	.	ID=rna-C9E97_RS05160;Parent=gene-C9E97_RS05160;anticodon=(pos:24590..24592);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS05160;product=tRNA-Asn
NZ_PYKA01000041.1	tRNAscan-SE	exon	24557	24632	.	+	.	ID=exon-C9E97_RS05160-1;Parent=rna-C9E97_RS05160;anticodon=(pos:24590..24592);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS05160;product=tRNA-Asn
NZ_PYKA01000041.1	RefSeq	gene	24859	25788	.	-	.	ID=gene-C9E97_RS05165;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=C9E97_RS05165;old_locus_tag=C9E97_05295
NZ_PYKA01000041.1	Protein Homology	CDS	24859	25788	.	-	0	ID=cds-WP_001252817.1;Parent=gene-C9E97_RS05165;Dbxref=GenBank:WP_001252817.1;Name=WP_001252817.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460960.1;locus_tag=C9E97_RS05165;product=L%2CD-transpeptidase;protein_id=WP_001252817.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	25866	26936	.	-	.	ID=gene-C9E97_RS05170;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=C9E97_RS05170;old_locus_tag=C9E97_05300
NZ_PYKA01000041.1	Protein Homology	CDS	25866	26936	.	-	0	ID=cds-WP_135369612.1;Parent=gene-C9E97_RS05170;Dbxref=GenBank:WP_135369612.1;Name=WP_135369612.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460961.1;locus_tag=C9E97_RS05170;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_135369612.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	26963	27706	.	-	.	ID=gene-C9E97_RS05175;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=C9E97_RS05175;old_locus_tag=C9E97_05305
NZ_PYKA01000041.1	Protein Homology	CDS	26963	27706	.	-	0	ID=cds-WP_000039999.1;Parent=gene-C9E97_RS05175;Dbxref=GenBank:WP_000039999.1;Name=WP_000039999.1;Ontology_term=GO:0009236,GO:0008818,GO:0051073;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA,adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460962.1;locus_tag=C9E97_RS05175;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_000039999.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	27703	28248	.	-	.	ID=gene-C9E97_RS05180;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=C9E97_RS05180;old_locus_tag=C9E97_05310
NZ_PYKA01000041.1	Protein Homology	CDS	27703	28248	.	-	0	ID=cds-WP_000973146.1;Parent=gene-C9E97_RS05180;Dbxref=GenBank:WP_000973146.1;Name=WP_000973146.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460963.1;locus_tag=C9E97_RS05180;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_000973146.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	28245	29765	.	-	.	ID=gene-C9E97_RS05185;Name=C9E97_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05185;old_locus_tag=C9E97_05315
NZ_PYKA01000041.1	Protein Homology	CDS	28245	29765	.	-	0	ID=cds-WP_135369613.1;Parent=gene-C9E97_RS05185;Dbxref=GenBank:WP_135369613.1;Name=WP_135369613.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460964.1;locus_tag=C9E97_RS05185;product=cobyric acid synthase;protein_id=WP_135369613.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	29762	30577	.	-	.	ID=gene-C9E97_RS05190;Name=C9E97_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05190;old_locus_tag=C9E97_05320
NZ_PYKA01000041.1	Protein Homology	CDS	29762	30577	.	-	0	ID=cds-WP_000881540.1;Parent=gene-C9E97_RS05190;Dbxref=GenBank:WP_000881540.1;Name=WP_000881540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460965.1;locus_tag=C9E97_RS05190;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_000881540.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	30586	31263	.	-	.	ID=gene-C9E97_RS05195;Name=C9E97_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05195;old_locus_tag=C9E97_05325
NZ_PYKA01000041.1	Protein Homology	CDS	30586	31263	.	-	0	ID=cds-WP_080088129.1;Parent=gene-C9E97_RS05195;Dbxref=GenBank:WP_080088129.1;Name=WP_080088129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460966.1;locus_tag=C9E97_RS05195;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=WP_080088129.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	31250	31531	.	-	.	ID=gene-C9E97_RS05200;Name=C9E97_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05200;old_locus_tag=C9E97_05330
NZ_PYKA01000041.1	Protein Homology	CDS	31250	31531	.	-	0	ID=cds-WP_000753216.1;Parent=gene-C9E97_RS05200;Dbxref=GenBank:WP_000753216.1;Name=WP_000753216.1;Ontology_term=GO:0006824,GO:0009236,GO:0015087,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460967.1;locus_tag=C9E97_RS05200;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=WP_000753216.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	31533	32270	.	-	.	ID=gene-C9E97_RS05205;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=C9E97_RS05205;old_locus_tag=C9E97_05335
NZ_PYKA01000041.1	Protein Homology	CDS	31533	32270	.	-	0	ID=cds-WP_000764336.1;Parent=gene-C9E97_RS05205;Dbxref=GenBank:WP_000764336.1;Name=WP_000764336.1;Ontology_term=GO:0006824,GO:0009236,GO:0016020,GO:0043190;gbkey=CDS;gene=cbiM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=C9E97_RS05205;product=cobalt ECF transporter S component CbiM;protein_id=WP_000764336.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	32267	32980	.	-	.	ID=gene-C9E97_RS05210;Name=C9E97_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05210;old_locus_tag=C9E97_05340
NZ_PYKA01000041.1	Protein Homology	CDS	32267	32980	.	-	0	ID=cds-WP_135369614.1;Parent=gene-C9E97_RS05210;Dbxref=GenBank:WP_135369614.1;Name=WP_135369614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460969.1;locus_tag=C9E97_RS05210;product=cobalt-factor II C(20)-methyltransferase;protein_id=WP_135369614.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	32977	33771	.	-	.	ID=gene-C9E97_RS05215;Name=cbiK;gbkey=Gene;gene=cbiK;gene_biotype=protein_coding;locus_tag=C9E97_RS05215;old_locus_tag=C9E97_05345
NZ_PYKA01000041.1	Protein Homology	CDS	32977	33771	.	-	0	ID=cds-WP_000709784.1;Parent=gene-C9E97_RS05215;Dbxref=GenBank:WP_000709784.1;Name=WP_000709784.1;Ontology_term=GO:0006779,GO:0016852,GO:0046906;gbkey=CDS;gene=cbiK;go_function=sirohydrochlorin cobaltochelatase activity|0016852||IEA,tetrapyrrole binding|0046906||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460970.1;locus_tag=C9E97_RS05215;product=sirohydrochlorin cobaltochelatase;protein_id=WP_000709784.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	33774	34565	.	-	.	ID=gene-C9E97_RS05220;Name=C9E97_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05220;old_locus_tag=C9E97_05350
NZ_PYKA01000041.1	Protein Homology	CDS	33774	34565	.	-	0	ID=cds-WP_001001982.1;Parent=gene-C9E97_RS05220;Dbxref=GenBank:WP_001001982.1;Name=WP_001001982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460971.1;locus_tag=C9E97_RS05220;product=cobalt-precorrin-6A reductase;protein_id=WP_001001982.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	34562	35287	.	-	.	ID=gene-C9E97_RS05225;Name=C9E97_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05225;old_locus_tag=C9E97_05355
NZ_PYKA01000041.1	Protein Homology	CDS	34562	35287	.	-	0	ID=cds-WP_000953643.1;Parent=gene-C9E97_RS05225;Dbxref=GenBank:WP_000953643.1;Name=WP_000953643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460972.1;locus_tag=C9E97_RS05225;product=precorrin-3B C(17)-methyltransferase;protein_id=WP_000953643.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	35287	36342	.	-	.	ID=gene-C9E97_RS05230;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=protein_coding;locus_tag=C9E97_RS05230;old_locus_tag=C9E97_05360
NZ_PYKA01000041.1	Protein Homology	CDS	35287	36342	.	-	0	ID=cds-WP_001098919.1;Parent=gene-C9E97_RS05230;Dbxref=GenBank:WP_001098919.1;Name=WP_001098919.1;gbkey=CDS;gene=cbiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460973.1;locus_tag=C9E97_RS05230;product=cobalt-precorrin 5A hydrolase;protein_id=WP_001098919.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	36323	37096	.	-	.	ID=gene-C9E97_RS05235;Name=C9E97_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05235;old_locus_tag=C9E97_05365
NZ_PYKA01000041.1	Protein Homology	CDS	36323	37096	.	-	0	ID=cds-WP_048591649.1;Parent=gene-C9E97_RS05235;Dbxref=GenBank:WP_048591649.1;Name=WP_048591649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460974.1;locus_tag=C9E97_RS05235;product=cobalt-precorrin-4 methyltransferase;protein_id=WP_048591649.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	37080	37658	.	-	.	ID=gene-C9E97_RS05240;Name=C9E97_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05240;old_locus_tag=C9E97_05370
NZ_PYKA01000041.1	Protein Homology	CDS	37080	37658	.	-	0	ID=cds-WP_023204216.1;Parent=gene-C9E97_RS05240;Dbxref=GenBank:WP_023204216.1;Name=WP_023204216.1;Ontology_term=GO:0009236,GO:0008276;gbkey=CDS;go_function=protein methyltransferase activity|0008276||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460975.1;locus_tag=C9E97_RS05240;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=WP_023204216.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	37648	38253	.	-	.	ID=gene-C9E97_RS05245;Name=C9E97_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05245;old_locus_tag=C9E97_05375
NZ_PYKA01000041.1	Protein Homology	CDS	37648	38253	.	-	0	ID=cds-WP_000958839.1;Parent=gene-C9E97_RS05245;Dbxref=GenBank:WP_000958839.1;Name=WP_000958839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460976.1;locus_tag=C9E97_RS05245;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=WP_000958839.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	38247	39386	.	-	.	ID=gene-C9E97_RS05250;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=C9E97_RS05250;old_locus_tag=C9E97_05380
NZ_PYKA01000041.1	Protein Homology	CDS	38247	39386	.	-	0	ID=cds-WP_001292910.1;Parent=gene-C9E97_RS05250;Dbxref=GenBank:WP_001292910.1;Name=WP_001292910.1;Ontology_term=GO:0009236,GO:0005737;gbkey=CDS;gene=cbiD;go_component=cytoplasm|0005737||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460977.1;locus_tag=C9E97_RS05250;product=cobalt-precorrin-5B (C(1))-methyltransferase CbiD;protein_id=WP_001292910.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	39386	40018	.	-	.	ID=gene-C9E97_RS05255;Name=C9E97_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05255;old_locus_tag=C9E97_05385
NZ_PYKA01000041.1	Protein Homology	CDS	39386	40018	.	-	0	ID=cds-WP_064047176.1;Parent=gene-C9E97_RS05255;Dbxref=GenBank:WP_064047176.1;Name=WP_064047176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460978.1;locus_tag=C9E97_RS05255;product=cobalt-precorrin-8 methylmutase;protein_id=WP_064047176.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	40029	40988	.	-	.	ID=gene-C9E97_RS05260;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=C9E97_RS05260;old_locus_tag=C9E97_05390
NZ_PYKA01000041.1	Protein Homology	CDS	40029	40988	.	-	0	ID=cds-WP_000153647.1;Parent=gene-C9E97_RS05260;Dbxref=GenBank:WP_000153647.1;Name=WP_000153647.1;Ontology_term=GO:0009236,GO:0048472,GO:0016020;gbkey=CDS;gene=cbiB;go_component=membrane|0016020||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460979.1;locus_tag=C9E97_RS05260;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WP_000153647.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	40985	42364	.	-	.	ID=gene-C9E97_RS05265;Name=C9E97_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05265;old_locus_tag=C9E97_05395
NZ_PYKA01000041.1	Protein Homology	CDS	40985	42364	.	-	0	ID=cds-WP_135369615.1;Parent=gene-C9E97_RS05265;Dbxref=GenBank:WP_135369615.1;Name=WP_135369615.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460980.1;locus_tag=C9E97_RS05265;product=cobyrinate a%2Cc-diamide synthase;protein_id=WP_135369615.1;transl_table=11
NZ_PYKA01000041.1	cmsearch	riboswitch	42462	42636	.	-	.	ID=id-NZ_PYKA01000041.1:42462..42636;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PYKA01000041.1	RefSeq	gene	42962	43873	.	-	.	ID=gene-C9E97_RS05270;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=protein_coding;locus_tag=C9E97_RS05270;old_locus_tag=C9E97_05400
NZ_PYKA01000041.1	Protein Homology	CDS	42962	43873	.	-	0	ID=cds-WP_000622326.1;Parent=gene-C9E97_RS05270;Dbxref=GenBank:WP_000622326.1;Name=WP_000622326.1;Ontology_term=GO:0009236,GO:0051144,GO:0003700,GO:0043565;gbkey=CDS;gene=pocR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,propanediol catabolic process|0051144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460981.1;locus_tag=C9E97_RS05270;product=transcriptional regulator PocR;protein_id=WP_000622326.1;transl_table=11
NZ_PYKA01000041.1	RefSeq	gene	44090	44884	.	-	.	ID=gene-C9E97_RS05275;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=C9E97_RS05275;old_locus_tag=C9E97_05405
NZ_PYKA01000041.1	Protein Homology	CDS	44090	44884	.	-	0	ID=cds-WP_001000023.1;Parent=gene-C9E97_RS05275;Dbxref=GenBank:WP_001000023.1;Name=WP_001000023.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460982.1;locus_tag=C9E97_RS05275;product=propanediol diffusion facilitator PduF;protein_id=WP_001000023.1;transl_table=11
##sequence-region NZ_PYKA01000070.1 1 44534
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000070.1	RefSeq	region	1	44534	.	+	.	ID=NZ_PYKA01000070.1:1..44534;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000070.1	RefSeq	gene	425	988	.	+	.	ID=gene-C9E97_RS10320;Name=pagL;gbkey=Gene;gene=pagL;gene_biotype=protein_coding;locus_tag=C9E97_RS10320;old_locus_tag=C9E97_10540
NZ_PYKA01000070.1	Protein Homology	CDS	425	988	.	+	0	ID=cds-WP_077950732.1;Parent=gene-C9E97_RS10320;Dbxref=GenBank:WP_077950732.1;Name=WP_077950732.1;gbkey=CDS;gene=pagL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461188.1;locus_tag=C9E97_RS10320;product=lipid A 3-O-deacylase PagL;protein_id=WP_077950732.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	1180	1368	.	-	.	ID=gene-C9E97_RS10325;Name=C9E97_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10325;old_locus_tag=C9E97_10545
NZ_PYKA01000070.1	Protein Homology	CDS	1180	1368	.	-	0	ID=cds-WP_001142121.1;Parent=gene-C9E97_RS10325;Dbxref=GenBank:WP_001142121.1;Name=WP_001142121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461187.1;locus_tag=C9E97_RS10325;product=hypothetical protein;protein_id=WP_001142121.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	pseudogene	1362	1454	.	-	.	ID=gene-C9E97_RS23740;Name=C9E97_RS23740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23740;partial=true;pseudo=true;start_range=.,1362
NZ_PYKA01000070.1	Protein Homology	CDS	1362	1454	.	-	0	ID=cds-C9E97_RS23740;Parent=gene-C9E97_RS23740;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460028.1;locus_tag=C9E97_RS23740;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1362;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	1410	1486	.	-	.	ID=gene-C9E97_RS10330;Name=C9E97_RS10330;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS10330;old_locus_tag=C9E97_10550
NZ_PYKA01000070.1	tRNAscan-SE	tRNA	1410	1486	.	-	.	ID=rna-C9E97_RS10330;Parent=gene-C9E97_RS10330;anticodon=(pos:complement(1450..1452));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS10330;product=tRNA-Pro
NZ_PYKA01000070.1	tRNAscan-SE	exon	1410	1486	.	-	.	ID=exon-C9E97_RS10330-1;Parent=rna-C9E97_RS10330;anticodon=(pos:complement(1450..1452));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS10330;product=tRNA-Pro
NZ_PYKA01000070.1	RefSeq	gene	1560	3320	.	-	.	ID=gene-C9E97_RS10335;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=C9E97_RS10335;old_locus_tag=C9E97_10555
NZ_PYKA01000070.1	Protein Homology	CDS	1560	3320	.	-	0	ID=cds-WP_135369178.1;Parent=gene-C9E97_RS10335;Dbxref=GenBank:WP_135369178.1;Name=WP_135369178.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=C9E97_RS10335;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_135369178.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	3352	3579	.	-	.	ID=gene-C9E97_RS10340;Name=C9E97_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10340;old_locus_tag=C9E97_10560
NZ_PYKA01000070.1	Protein Homology	CDS	3352	3579	.	-	0	ID=cds-WP_001135904.1;Parent=gene-C9E97_RS10340;Dbxref=GenBank:WP_001135904.1;Name=WP_001135904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461171.1;locus_tag=C9E97_RS10340;product=YejL family protein;protein_id=WP_001135904.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	3759	4766	.	+	.	ID=gene-C9E97_RS10345;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=C9E97_RS10345;old_locus_tag=C9E97_10565
NZ_PYKA01000070.1	Protein Homology	CDS	3759	4766	.	+	0	ID=cds-WP_000050805.1;Parent=gene-C9E97_RS10345;Dbxref=GenBank:WP_000050805.1;Name=WP_000050805.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461170.1;locus_tag=C9E97_RS10345;product=nucleoid-associated protein YejK;protein_id=WP_000050805.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	4794	5414	.	+	.	ID=gene-C9E97_RS10350;Name=C9E97_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10350;old_locus_tag=C9E97_10570
NZ_PYKA01000070.1	Protein Homology	CDS	4794	5414	.	+	0	ID=cds-WP_135369179.1;Parent=gene-C9E97_RS10350;Dbxref=GenBank:WP_135369179.1;Name=WP_135369179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461169.1;locus_tag=C9E97_RS10350;product=hypothetical protein;protein_id=WP_135369179.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	5523	5807	.	-	.	ID=gene-C9E97_RS10355;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=C9E97_RS10355;old_locus_tag=C9E97_10575
NZ_PYKA01000070.1	Protein Homology	CDS	5523	5807	.	-	0	ID=cds-WP_000494192.1;Parent=gene-C9E97_RS10355;Dbxref=GenBank:WP_000494192.1;Name=WP_000494192.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=C9E97_RS10355;product=50S ribosomal protein L25;protein_id=WP_000494192.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	5932	7692	.	-	.	ID=gene-C9E97_RS10360;Name=C9E97_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10360;old_locus_tag=C9E97_10580
NZ_PYKA01000070.1	Protein Homology	CDS	5932	7692	.	-	0	ID=cds-WP_000578123.1;Parent=gene-C9E97_RS10360;Dbxref=GenBank:WP_000578123.1;Name=WP_000578123.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461167.1;locus_tag=C9E97_RS10360;product=DEAD/DEAH box helicase;protein_id=WP_000578123.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	7844	8539	.	+	.	ID=gene-C9E97_RS10365;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=C9E97_RS10365;old_locus_tag=C9E97_10585
NZ_PYKA01000070.1	Protein Homology	CDS	7844	8539	.	+	0	ID=cds-WP_001234836.1;Parent=gene-C9E97_RS10365;Dbxref=GenBank:WP_001234836.1;Name=WP_001234836.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461166.1;locus_tag=C9E97_RS10365;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_001234836.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	8567	9757	.	+	.	ID=gene-C9E97_RS10370;Name=C9E97_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10370;old_locus_tag=C9E97_10590
NZ_PYKA01000070.1	Protein Homology	CDS	8567	9757	.	+	0	ID=cds-WP_000213349.1;Parent=gene-C9E97_RS10370;Dbxref=GenBank:WP_000213349.1;Name=WP_000213349.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461165.1;locus_tag=C9E97_RS10370;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_000213349.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	10148	10492	.	+	.	ID=gene-C9E97_RS10375;Name=C9E97_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10375;old_locus_tag=C9E97_10600
NZ_PYKA01000070.1	Protein Homology	CDS	10148	10492	.	+	0	ID=cds-WP_001094639.1;Parent=gene-C9E97_RS10375;Dbxref=GenBank:WP_001094639.1;Name=WP_001094639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461164.1;locus_tag=C9E97_RS10375;product=YejG family protein;protein_id=WP_001094639.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	10496	12085	.	-	.	ID=gene-C9E97_RS10380;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=C9E97_RS10380;old_locus_tag=C9E97_10605
NZ_PYKA01000070.1	Protein Homology	CDS	10496	12085	.	-	0	ID=cds-WP_000203612.1;Parent=gene-C9E97_RS10380;Dbxref=GenBank:WP_000203612.1;Name=WP_000203612.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461163.1;locus_tag=C9E97_RS10380;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_000203612.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	12087	13112	.	-	.	ID=gene-C9E97_RS10385;Name=C9E97_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10385;old_locus_tag=C9E97_10610
NZ_PYKA01000070.1	Protein Homology	CDS	12087	13112	.	-	0	ID=cds-WP_001137761.1;Parent=gene-C9E97_RS10385;Dbxref=GenBank:WP_001137761.1;Name=WP_001137761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461162.1;locus_tag=C9E97_RS10385;product=ABC transporter permease;protein_id=WP_001137761.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	13112	14206	.	-	.	ID=gene-C9E97_RS10390;Name=C9E97_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10390;old_locus_tag=C9E97_10615
NZ_PYKA01000070.1	Protein Homology	CDS	13112	14206	.	-	0	ID=cds-WP_000501623.1;Parent=gene-C9E97_RS10390;Dbxref=GenBank:WP_000501623.1;Name=WP_000501623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461161.1;locus_tag=C9E97_RS10390;product=microcin C ABC transporter permease YejB;protein_id=WP_000501623.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	14216	16021	.	-	.	ID=gene-C9E97_RS10395;Name=C9E97_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10395;old_locus_tag=C9E97_10620
NZ_PYKA01000070.1	Protein Homology	CDS	14216	16021	.	-	0	ID=cds-WP_000561742.1;Parent=gene-C9E97_RS10395;Dbxref=GenBank:WP_000561742.1;Name=WP_000561742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461160.1;locus_tag=C9E97_RS10395;product=extracellular solute-binding protein;protein_id=WP_000561742.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	16128	17684	.	-	.	ID=gene-C9E97_RS10400;Name=C9E97_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10400;old_locus_tag=C9E97_10625
NZ_PYKA01000070.1	Protein Homology	CDS	16128	17684	.	-	0	ID=cds-WP_135369180.1;Parent=gene-C9E97_RS10400;Dbxref=GenBank:WP_135369180.1;Name=WP_135369180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461159.1;locus_tag=C9E97_RS10400;product=cyclic di-GMP phosphodiesterase;protein_id=WP_135369180.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	18010	18582	.	-	.	ID=gene-C9E97_RS10405;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=C9E97_RS10405;old_locus_tag=C9E97_10630
NZ_PYKA01000070.1	Protein Homology	CDS	18010	18582	.	-	0	ID=cds-WP_000241015.1;Parent=gene-C9E97_RS10405;Dbxref=GenBank:WP_000241015.1;Name=WP_000241015.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461158.1;locus_tag=C9E97_RS10405;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_000241015.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	18996	19715	.	-	.	ID=gene-C9E97_RS10410;Name=C9E97_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10410;old_locus_tag=C9E97_10640
NZ_PYKA01000070.1	Protein Homology	CDS	18996	19715	.	-	0	ID=cds-WP_000178091.1;Parent=gene-C9E97_RS10410;Dbxref=GenBank:WP_000178091.1;Name=WP_000178091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461157.1;locus_tag=C9E97_RS10410;product=phosphatase PAP2 family protein;protein_id=WP_000178091.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	19745	20731	.	-	.	ID=gene-C9E97_RS10415;Name=C9E97_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10415;old_locus_tag=C9E97_10645
NZ_PYKA01000070.1	Protein Homology	CDS	19745	20731	.	-	0	ID=cds-WP_000169350.1;Parent=gene-C9E97_RS10415;Dbxref=GenBank:WP_000169350.1;Name=WP_000169350.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461156.1;locus_tag=C9E97_RS10415;product=CobW family GTP-binding protein;protein_id=WP_000169350.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	20943	21515	.	-	.	ID=gene-C9E97_RS10420;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=C9E97_RS10420;old_locus_tag=C9E97_10650
NZ_PYKA01000070.1	Protein Homology	CDS	20943	21515	.	-	0	ID=cds-WP_001136822.1;Parent=gene-C9E97_RS10420;Dbxref=GenBank:WP_001136822.1;Name=WP_001136822.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=C9E97_RS10420;product=elongation factor P-like protein YeiP;protein_id=WP_001136822.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	21839	22093	.	+	.	ID=gene-C9E97_RS10425;Name=C9E97_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10425;old_locus_tag=C9E97_10655
NZ_PYKA01000070.1	Protein Homology	CDS	21839	22093	.	+	0	ID=cds-WP_001523448.1;Parent=gene-C9E97_RS10425;Dbxref=GenBank:WP_001523448.1;Name=WP_001523448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675765.1;locus_tag=C9E97_RS10425;product=YkgJ family cysteine cluster protein;protein_id=WP_001523448.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	22631	22753	.	+	.	ID=gene-C9E97_RS10430;Name=C9E97_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10430;old_locus_tag=C9E97_10665
NZ_PYKA01000070.1	Protein Homology	CDS	22631	22753	.	+	0	ID=cds-WP_001519564.1;Parent=gene-C9E97_RS10430;Dbxref=GenBank:WP_001519564.1;Name=WP_001519564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461154.1;locus_tag=C9E97_RS10430;product=membrane protein;protein_id=WP_001519564.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	22755	23420	.	+	.	ID=gene-C9E97_RS10435;Name=C9E97_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10435;old_locus_tag=C9E97_10670
NZ_PYKA01000070.1	Protein Homology	CDS	22755	23420	.	+	0	ID=cds-WP_135369714.1;Parent=gene-C9E97_RS10435;Dbxref=GenBank:WP_135369714.1;Name=WP_135369714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461153.1;locus_tag=C9E97_RS10435;product=GNVR domain-containing protein;protein_id=WP_135369714.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	23485	24666	.	-	.	ID=gene-C9E97_RS10440;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=C9E97_RS10440;old_locus_tag=C9E97_10675
NZ_PYKA01000070.1	Protein Homology	CDS	23485	24666	.	-	0	ID=cds-WP_135369713.1;Parent=gene-C9E97_RS10440;Dbxref=GenBank:WP_135369713.1;Name=WP_135369713.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461152.1;locus_tag=C9E97_RS10440;product=sugar efflux transporter SetB;protein_id=WP_135369713.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	25035	26165	.	+	.	ID=gene-C9E97_RS10445;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=C9E97_RS10445;old_locus_tag=C9E97_10680
NZ_PYKA01000070.1	Protein Homology	CDS	25035	26165	.	+	0	ID=cds-WP_000487287.1;Parent=gene-C9E97_RS10445;Dbxref=GenBank:WP_000487287.1;Name=WP_000487287.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461151.1;locus_tag=C9E97_RS10445;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_000487287.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	26165	27103	.	+	.	ID=gene-C9E97_RS10450;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=C9E97_RS10450;old_locus_tag=C9E97_10685
NZ_PYKA01000070.1	Protein Homology	CDS	26165	27103	.	+	0	ID=cds-WP_000091249.1;Parent=gene-C9E97_RS10450;Dbxref=GenBank:WP_000091249.1;Name=WP_000091249.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461150.1;locus_tag=C9E97_RS10450;product=1-phosphofructokinase;protein_id=WP_000091249.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	27120	28808	.	+	.	ID=gene-C9E97_RS10455;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=C9E97_RS10455;old_locus_tag=C9E97_10690
NZ_PYKA01000070.1	Protein Homology	CDS	27120	28808	.	+	0	ID=cds-WP_000854417.1;Parent=gene-C9E97_RS10455;Dbxref=GenBank:WP_000854417.1;Name=WP_000854417.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461149.1;locus_tag=C9E97_RS10455;product=PTS fructose transporter subunit IIBC;protein_id=WP_000854417.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	28873	29730	.	-	.	ID=gene-C9E97_RS10460;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=C9E97_RS10460;old_locus_tag=C9E97_10695
NZ_PYKA01000070.1	Protein Homology	CDS	28873	29730	.	-	0	ID=cds-WP_023204025.1;Parent=gene-C9E97_RS10460;Dbxref=GenBank:WP_023204025.1;Name=WP_023204025.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461148.1;locus_tag=C9E97_RS10460;product=deoxyribonuclease IV;protein_id=WP_023204025.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	29809	30858	.	-	.	ID=gene-C9E97_RS10465;Name=C9E97_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10465;old_locus_tag=C9E97_10700
NZ_PYKA01000070.1	Protein Homology	CDS	29809	30858	.	-	0	ID=cds-WP_000137966.1;Parent=gene-C9E97_RS10465;Dbxref=GenBank:WP_000137966.1;Name=WP_000137966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461147.1;locus_tag=C9E97_RS10465;product=YeiH family protein;protein_id=WP_000137966.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	30979	31842	.	+	.	ID=gene-C9E97_RS10470;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=C9E97_RS10470;old_locus_tag=C9E97_10705
NZ_PYKA01000070.1	Protein Homology	CDS	30979	31842	.	+	0	ID=cds-WP_000548315.1;Parent=gene-C9E97_RS10470;Dbxref=GenBank:WP_000548315.1;Name=WP_000548315.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461146.1;locus_tag=C9E97_RS10470;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_000548315.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	32032	33501	.	+	.	ID=gene-C9E97_RS10475;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=C9E97_RS10475;old_locus_tag=C9E97_10710
NZ_PYKA01000070.1	Protein Homology	CDS	32032	33501	.	+	0	ID=cds-WP_135369712.1;Parent=gene-C9E97_RS10475;Dbxref=GenBank:WP_135369712.1;Name=WP_135369712.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461145.1;locus_tag=C9E97_RS10475;product=lysine-specific permease;protein_id=WP_135369712.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	33848	35839	.	+	.	ID=gene-C9E97_RS10485;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=C9E97_RS10485;old_locus_tag=C9E97_10720
NZ_PYKA01000070.1	Protein Homology	CDS	33848	35839	.	+	0	ID=cds-WP_000488255.1;Parent=gene-C9E97_RS10485;Dbxref=GenBank:WP_000488255.1;Name=WP_000488255.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461144.1;locus_tag=C9E97_RS10485;product=catecholate siderophore receptor CirA;protein_id=WP_000488255.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	35883	37205	.	-	.	ID=gene-C9E97_RS10490;Name=C9E97_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10490;old_locus_tag=C9E97_10725
NZ_PYKA01000070.1	Protein Homology	CDS	35883	37205	.	-	0	ID=cds-WP_000023807.1;Parent=gene-C9E97_RS10490;Dbxref=GenBank:WP_000023807.1;Name=WP_000023807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461143.1;locus_tag=C9E97_RS10490;product=MFS transporter;protein_id=WP_000023807.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	37238	38125	.	-	.	ID=gene-C9E97_RS10495;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=C9E97_RS10495;old_locus_tag=C9E97_10730
NZ_PYKA01000070.1	Protein Homology	CDS	37238	38125	.	-	0	ID=cds-WP_058108583.1;Parent=gene-C9E97_RS10495;Dbxref=GenBank:WP_058108583.1;Name=WP_058108583.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461142.1;locus_tag=C9E97_RS10495;product=phosphoserine phosphatase SerB;protein_id=WP_058108583.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	38342	39709	.	+	.	ID=gene-C9E97_RS10500;Name=C9E97_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10500;old_locus_tag=C9E97_10735
NZ_PYKA01000070.1	Protein Homology	CDS	38342	39709	.	+	0	ID=cds-WP_103133245.1;Parent=gene-C9E97_RS10500;Dbxref=GenBank:WP_103133245.1;Name=WP_103133245.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461141.1;locus_tag=C9E97_RS10500;product=L-serine ammonia-lyase;protein_id=WP_103133245.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	39714	40103	.	+	.	ID=gene-C9E97_RS10505;Name=C9E97_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10505;old_locus_tag=C9E97_10740
NZ_PYKA01000070.1	Protein Homology	CDS	39714	40103	.	+	0	ID=cds-WP_000876817.1;Parent=gene-C9E97_RS10505;Dbxref=GenBank:WP_000876817.1;Name=WP_000876817.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461140.1;locus_tag=C9E97_RS10505;product=helix-turn-helix domain-containing protein;protein_id=WP_000876817.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	40092	40949	.	-	.	ID=gene-C9E97_RS10510;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=C9E97_RS10510;old_locus_tag=C9E97_10745
NZ_PYKA01000070.1	Protein Homology	CDS	40092	40949	.	-	0	ID=cds-WP_000425488.1;Parent=gene-C9E97_RS10510;Dbxref=GenBank:WP_000425488.1;Name=WP_000425488.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461139.2;locus_tag=C9E97_RS10510;product=S-formylglutathione hydrolase;protein_id=WP_000425488.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	41279	41947	.	+	.	ID=gene-C9E97_RS10515;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=C9E97_RS10515;old_locus_tag=C9E97_10755
NZ_PYKA01000070.1	Protein Homology	CDS	41279	41947	.	+	0	ID=cds-WP_001139611.1;Parent=gene-C9E97_RS10515;Dbxref=GenBank:WP_001139611.1;Name=WP_001139611.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461138.1;locus_tag=C9E97_RS10515;product=GTP cyclohydrolase I FolE;protein_id=WP_001139611.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	41962	43104	.	+	.	ID=gene-C9E97_RS10520;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=C9E97_RS10520;old_locus_tag=C9E97_10760
NZ_PYKA01000070.1	Protein Homology	CDS	41962	43104	.	+	0	ID=cds-WP_001518079.1;Parent=gene-C9E97_RS10520;Dbxref=GenBank:WP_001518079.1;Name=WP_001518079.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461137.1;locus_tag=C9E97_RS10520;product=DUF418 domain-containing protein YeiB;protein_id=WP_001518079.1;transl_table=11
NZ_PYKA01000070.1	RefSeq	gene	43254	44276	.	+	.	ID=gene-C9E97_RS10525;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=C9E97_RS10525;old_locus_tag=C9E97_10765
NZ_PYKA01000070.1	Protein Homology	CDS	43254	44276	.	+	0	ID=cds-WP_000628631.1;Parent=gene-C9E97_RS10525;Dbxref=GenBank:WP_000628631.1;Name=WP_000628631.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461136.1;locus_tag=C9E97_RS10525;product=HTH-type transcriptional regulator GalS;protein_id=WP_000628631.1;transl_table=11
##sequence-region NZ_PYKA01000016.1 1 43996
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000016.1	RefSeq	region	1	43996	.	+	.	ID=NZ_PYKA01000016.1:1..43996;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000016.1	RefSeq	pseudogene	1	239	.	-	.	ID=gene-C9E97_RS00985;Name=C9E97_RS00985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS00985;old_locus_tag=C9E97_01000;partial=true;pseudo=true;start_range=.,1
NZ_PYKA01000016.1	Protein Homology	CDS	1	239	.	-	0	ID=cds-C9E97_RS00985;Parent=gene-C9E97_RS00985;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000171103.1;locus_tag=C9E97_RS00985;partial=true;product=type IV secretion protein Rhs;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	236	4879	.	-	.	ID=gene-C9E97_RS23425;Name=C9E97_RS23425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23425
NZ_PYKA01000016.1	Protein Homology	CDS	236	4879	.	-	0	ID=cds-WP_167850510.1;Parent=gene-C9E97_RS23425;Dbxref=GenBank:WP_167850510.1;Name=WP_167850510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000503219.1;locus_tag=C9E97_RS23425;product=RHS repeat-associated core domain-containing protein;protein_id=WP_167850510.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	4895	5353	.	-	.	ID=gene-C9E97_RS00995;Name=C9E97_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00995;old_locus_tag=C9E97_01010
NZ_PYKA01000016.1	Protein Homology	CDS	4895	5353	.	-	0	ID=cds-WP_000186514.1;Parent=gene-C9E97_RS00995;Dbxref=GenBank:WP_000186514.1;Name=WP_000186514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000186512.1;locus_tag=C9E97_RS00995;product=DcrB-related protein;protein_id=WP_000186514.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	5413	7647	.	-	.	ID=gene-C9E97_RS01000;Name=C9E97_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01000;old_locus_tag=C9E97_01015
NZ_PYKA01000016.1	Protein Homology	CDS	5413	7647	.	-	0	ID=cds-WP_023250542.1;Parent=gene-C9E97_RS01000;Dbxref=GenBank:WP_023250542.1;Name=WP_023250542.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505545.1;locus_tag=C9E97_RS01000;product=type VI secretion system Vgr family protein;protein_id=WP_023250542.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	8044	8565	.	-	.	ID=gene-C9E97_RS01005;Name=C9E97_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01005;old_locus_tag=C9E97_01025
NZ_PYKA01000016.1	Protein Homology	CDS	8044	8565	.	-	0	ID=cds-WP_023994364.1;Parent=gene-C9E97_RS01005;Dbxref=GenBank:WP_023994364.1;Name=WP_023994364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459286.1;locus_tag=C9E97_RS01005;product=DUF2778 domain-containing protein;protein_id=WP_023994364.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	8589	9005	.	-	.	ID=gene-C9E97_RS01010;Name=C9E97_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01010;old_locus_tag=C9E97_01030
NZ_PYKA01000016.1	Protein Homology	CDS	8589	9005	.	-	0	ID=cds-WP_023227777.1;Parent=gene-C9E97_RS01010;Dbxref=GenBank:WP_023227777.1;Name=WP_023227777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459285.1;locus_tag=C9E97_RS01010;product=DUF2195 family protein;protein_id=WP_023227777.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	pseudogene	9002	9123	.	-	.	ID=gene-C9E97_RS23540;Name=C9E97_RS23540;end_range=9123,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23540;partial=true;pseudo=true
NZ_PYKA01000016.1	Protein Homology	CDS	9002	9123	.	-	0	ID=cds-C9E97_RS23540;Parent=gene-C9E97_RS23540;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=9123,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459284.1;locus_tag=C9E97_RS23540;partial=true;product=TagF domain-containing protein;pseudo=true;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	9132	9593	.	-	.	ID=gene-C9E97_RS01015;Name=C9E97_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01015;old_locus_tag=C9E97_01035
NZ_PYKA01000016.1	Protein Homology	CDS	9132	9593	.	-	0	ID=cds-WP_001684272.1;Parent=gene-C9E97_RS01015;Dbxref=GenBank:WP_001684272.1;Name=WP_001684272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670388.1;locus_tag=C9E97_RS01015;product=hypothetical protein;protein_id=WP_001684272.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	9578	10048	.	-	.	ID=gene-C9E97_RS01020;Name=C9E97_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01020;old_locus_tag=C9E97_01040
NZ_PYKA01000016.1	Protein Homology	CDS	9578	10048	.	-	0	ID=cds-WP_000528843.1;Parent=gene-C9E97_RS01020;Dbxref=GenBank:WP_000528843.1;Name=WP_000528843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528842.1;locus_tag=C9E97_RS01020;product=glucosaminidase domain-containing protein;protein_id=WP_000528843.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	10091	10858	.	-	.	ID=gene-C9E97_RS01025;Name=C9E97_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01025;old_locus_tag=C9E97_01045
NZ_PYKA01000016.1	Protein Homology	CDS	10091	10858	.	-	0	ID=cds-WP_001254127.1;Parent=gene-C9E97_RS01025;Dbxref=GenBank:WP_001254127.1;Name=WP_001254127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254119.1;locus_tag=C9E97_RS01025;product=TagF domain-containing protein;protein_id=WP_001254127.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	10858	14727	.	-	.	ID=gene-C9E97_RS01030;Name=icmF;gbkey=Gene;gene=icmF;gene_biotype=protein_coding;locus_tag=C9E97_RS01030;old_locus_tag=C9E97_01050
NZ_PYKA01000016.1	Protein Homology	CDS	10858	14727	.	-	0	ID=cds-WP_001168956.1;Parent=gene-C9E97_RS01030;Dbxref=GenBank:WP_001168956.1;Name=WP_001168956.1;gbkey=CDS;gene=icmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459283.1;locus_tag=C9E97_RS01030;product=Type VI secretion protein IcmF;protein_id=WP_001168956.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	14761	15192	.	-	.	ID=gene-C9E97_RS01035;Name=sciR;gbkey=Gene;gene=sciR;gene_biotype=protein_coding;locus_tag=C9E97_RS01035;old_locus_tag=C9E97_01055
NZ_PYKA01000016.1	Protein Homology	CDS	14761	15192	.	-	0	ID=cds-WP_000227044.1;Parent=gene-C9E97_RS01035;Dbxref=GenBank:WP_000227044.1;Name=WP_000227044.1;gbkey=CDS;gene=sciR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459282.1;locus_tag=C9E97_RS01035;product=Shiga-like toxin A subunit SciR;protein_id=WP_000227044.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	15395	16168	.	-	.	ID=gene-C9E97_RS01040;Name=C9E97_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01040;old_locus_tag=C9E97_01060
NZ_PYKA01000016.1	Protein Homology	CDS	15395	16168	.	-	0	ID=cds-WP_107280791.1;Parent=gene-C9E97_RS01040;Dbxref=GenBank:WP_107280791.1;Name=WP_107280791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459281.1;locus_tag=C9E97_RS01040;product=Rap1a/Tai family immunity protein;protein_id=WP_107280791.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	16173	17477	.	-	.	ID=gene-C9E97_RS01045;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=C9E97_RS01045;old_locus_tag=C9E97_01065
NZ_PYKA01000016.1	Protein Homology	CDS	16173	17477	.	-	0	ID=cds-WP_023236947.1;Parent=gene-C9E97_RS01045;Dbxref=GenBank:WP_023236947.1;Name=WP_023236947.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssL;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459280.1;locus_tag=C9E97_RS01045;product=type VI secretion system protein TssL%2C long form;protein_id=WP_023236947.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	17474	18817	.	-	.	ID=gene-C9E97_RS01050;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=C9E97_RS01050;old_locus_tag=C9E97_01070
NZ_PYKA01000016.1	Protein Homology	CDS	17474	18817	.	-	0	ID=cds-WP_000118732.1;Parent=gene-C9E97_RS01050;Dbxref=GenBank:WP_000118732.1;Name=WP_000118732.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459279.1;locus_tag=C9E97_RS01050;product=type VI secretion system baseplate subunit TssK;protein_id=WP_000118732.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	pseudogene	18821	19356	.	-	.	ID=gene-C9E97_RS01055;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=pseudogene;locus_tag=C9E97_RS01055;old_locus_tag=C9E97_01075;pseudo=true
NZ_PYKA01000016.1	Protein Homology	CDS	18821	19356	.	-	0	ID=cds-C9E97_RS01055;Parent=gene-C9E97_RS01055;Note=frameshifted;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=C9E97_RS01055;product=type VI secretion system lipoprotein TssJ;pseudo=true;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	19424	19909	.	-	.	ID=gene-C9E97_RS01060;Name=C9E97_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01060;old_locus_tag=C9E97_01080
NZ_PYKA01000016.1	Protein Homology	CDS	19424	19909	.	-	0	ID=cds-WP_023228246.1;Parent=gene-C9E97_RS01060;Dbxref=GenBank:WP_023228246.1;Name=WP_023228246.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459274.1;locus_tag=C9E97_RS01060;product=Hcp family type VI secretion system effector;protein_id=WP_023228246.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	20052	20435	.	-	.	ID=gene-C9E97_RS01065;Name=C9E97_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01065;old_locus_tag=C9E97_01085
NZ_PYKA01000016.1	Protein Homology	CDS	20052	20435	.	-	0	ID=cds-WP_000379146.1;Parent=gene-C9E97_RS01065;Dbxref=GenBank:WP_000379146.1;Name=WP_000379146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459276.1;locus_tag=C9E97_RS01065;product=type VI secretion system amidase immunity protein Tai4;protein_id=WP_000379146.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	20420	20905	.	-	.	ID=gene-C9E97_RS01070;Name=C9E97_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01070;old_locus_tag=C9E97_01090
NZ_PYKA01000016.1	Protein Homology	CDS	20420	20905	.	-	0	ID=cds-WP_001081550.1;Parent=gene-C9E97_RS01070;Dbxref=GenBank:WP_001081550.1;Name=WP_001081550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459275.1;locus_tag=C9E97_RS01070;product=type VI secretion system amidase effector protein Tae4;protein_id=WP_001081550.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	pseudogene	20948	21141	.	-	.	ID=gene-C9E97_RS23635;Name=C9E97_RS23635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23635;partial=true;pseudo=true;start_range=.,20948
NZ_PYKA01000016.1	Protein Homology	CDS	20948	21141	.	-	0	ID=cds-C9E97_RS23635;Parent=gene-C9E97_RS23635;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=C9E97_RS23635;partial=true;product=type VI secretion system lipoprotein TssJ;pseudo=true;start_range=.,20948;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	21209	21694	.	-	.	ID=gene-C9E97_RS01075;Name=C9E97_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01075;old_locus_tag=C9E97_01095
NZ_PYKA01000016.1	Protein Homology	CDS	21209	21694	.	-	0	ID=cds-WP_060759583.1;Parent=gene-C9E97_RS01075;Dbxref=GenBank:WP_060759583.1;Name=WP_060759583.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459274.1;locus_tag=C9E97_RS01075;product=Hcp family type VI secretion system effector;protein_id=WP_060759583.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	21948	22589	.	-	.	ID=gene-C9E97_RS23955;Name=C9E97_RS23955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23955
NZ_PYKA01000016.1	Protein Homology	CDS	21948	22589	.	-	0	ID=cds-WP_346763453.1;Parent=gene-C9E97_RS23955;Dbxref=GenBank:WP_346763453.1;Name=WP_346763453.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042415.1;locus_tag=C9E97_RS23955;product=STY0301 family protein;protein_id=WP_346763453.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	22582	24090	.	-	.	ID=gene-C9E97_RS01090;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=C9E97_RS01090;old_locus_tag=C9E97_01110
NZ_PYKA01000016.1	Protein Homology	CDS	22582	24090	.	-	0	ID=cds-WP_000013884.1;Parent=gene-C9E97_RS01090;Dbxref=GenBank:WP_000013884.1;Name=WP_000013884.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459271.1;locus_tag=C9E97_RS01090;product=type VI secretion system contractile sheath large subunit;protein_id=WP_000013884.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	24114	24656	.	-	.	ID=gene-C9E97_RS01095;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=C9E97_RS01095;old_locus_tag=C9E97_01115
NZ_PYKA01000016.1	Protein Homology	CDS	24114	24656	.	-	0	ID=cds-WP_000996815.1;Parent=gene-C9E97_RS01095;Dbxref=GenBank:WP_000996815.1;Name=WP_000996815.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459270.1;locus_tag=C9E97_RS01095;product=type VI secretion system contractile sheath small subunit;protein_id=WP_000996815.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	24756	27395	.	-	.	ID=gene-C9E97_RS01100;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=C9E97_RS01100;old_locus_tag=C9E97_01120
NZ_PYKA01000016.1	Protein Homology	CDS	24756	27395	.	-	0	ID=cds-WP_000449779.1;Parent=gene-C9E97_RS01100;Dbxref=GenBank:WP_000449779.1;Name=WP_000449779.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459269.1;locus_tag=C9E97_RS01100;product=type VI secretion system ATPase TssH;protein_id=WP_000449779.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	27763	28665	.	+	.	ID=gene-C9E97_RS01105;Name=tagK;gbkey=Gene;gene=tagK;gene_biotype=protein_coding;locus_tag=C9E97_RS01105;old_locus_tag=C9E97_01125
NZ_PYKA01000016.1	Protein Homology	CDS	27763	28665	.	+	0	ID=cds-WP_000806681.1;Parent=gene-C9E97_RS01105;Dbxref=GenBank:WP_000806681.1;Name=WP_000806681.1;gbkey=CDS;gene=tagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459268.1;locus_tag=C9E97_RS01105;product=type VI secretion system-associated protein TagK;protein_id=WP_000806681.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	28652	29476	.	+	.	ID=gene-C9E97_RS01110;Name=C9E97_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01110;old_locus_tag=C9E97_01130
NZ_PYKA01000016.1	Protein Homology	CDS	28652	29476	.	+	0	ID=cds-WP_000750535.1;Parent=gene-C9E97_RS01110;Dbxref=GenBank:WP_000750535.1;Name=WP_000750535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459267.1;locus_tag=C9E97_RS01110;product=type VI secretion system accessory protein TagJ;protein_id=WP_000750535.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	29473	29967	.	+	.	ID=gene-C9E97_RS01115;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=C9E97_RS01115;old_locus_tag=C9E97_01135
NZ_PYKA01000016.1	Protein Homology	CDS	29473	29967	.	+	0	ID=cds-WP_000108007.1;Parent=gene-C9E97_RS01115;Dbxref=GenBank:WP_000108007.1;Name=WP_000108007.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459266.1;locus_tag=C9E97_RS01115;product=type VI secretion system baseplate subunit TssE;protein_id=WP_000108007.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	29983	31866	.	+	.	ID=gene-C9E97_RS01120;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=C9E97_RS01120;old_locus_tag=C9E97_01140
NZ_PYKA01000016.1	Protein Homology	CDS	29983	31866	.	+	0	ID=cds-WP_000371508.1;Parent=gene-C9E97_RS01120;Dbxref=GenBank:WP_000371508.1;Name=WP_000371508.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459265.1;locus_tag=C9E97_RS01120;product=type VI secretion system baseplate subunit TssF;protein_id=WP_000371508.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	pseudogene	31923	32857	.	+	.	ID=gene-C9E97_RS01125;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=pseudogene;locus_tag=C9E97_RS01125;old_locus_tag=C9E97_01145;pseudo=true
NZ_PYKA01000016.1	Protein Homology	CDS	31923	32857	.	+	0	ID=cds-C9E97_RS01125;Parent=gene-C9E97_RS01125;Note=frameshifted;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:NF018675.6;locus_tag=C9E97_RS01125;product=type VI secretion system baseplate subunit TssG;pseudo=true;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	32868	33923	.	+	.	ID=gene-C9E97_RS01130;Name=C9E97_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01130;old_locus_tag=C9E97_01150
NZ_PYKA01000016.1	Protein Homology	CDS	32868	33923	.	+	0	ID=cds-WP_000367627.1;Parent=gene-C9E97_RS01130;Dbxref=GenBank:WP_000367627.1;Name=WP_000367627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459263.1;locus_tag=C9E97_RS01130;product=ImpA family type VI secretion system protein;protein_id=WP_000367627.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	34244	34320	.	-	.	ID=gene-C9E97_RS01135;Name=C9E97_RS01135;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS01135;old_locus_tag=C9E97_01155
NZ_PYKA01000016.1	tRNAscan-SE	tRNA	34244	34320	.	-	.	ID=rna-C9E97_RS01135;Parent=gene-C9E97_RS01135;anticodon=(pos:complement(34284..34286));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS01135;product=tRNA-Asp
NZ_PYKA01000016.1	tRNAscan-SE	exon	34244	34320	.	-	.	ID=exon-C9E97_RS01135-1;Parent=rna-C9E97_RS01135;anticodon=(pos:complement(34284..34286));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS01135;product=tRNA-Asp
NZ_PYKA01000016.1	RefSeq	gene	34454	35185	.	-	.	ID=gene-C9E97_RS01140;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=C9E97_RS01140;old_locus_tag=C9E97_01160
NZ_PYKA01000016.1	Protein Homology	CDS	34454	35185	.	-	0	ID=cds-WP_001670675.1;Parent=gene-C9E97_RS01140;Dbxref=GenBank:WP_001670675.1;Name=WP_001670675.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459262.1;locus_tag=C9E97_RS01140;product=DNA polymerase III subunit epsilon;protein_id=WP_001670675.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	35249	35716	.	+	.	ID=gene-C9E97_RS01145;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=C9E97_RS01145;old_locus_tag=C9E97_01165
NZ_PYKA01000016.1	Protein Homology	CDS	35249	35716	.	+	0	ID=cds-WP_000917872.1;Parent=gene-C9E97_RS01145;Dbxref=GenBank:WP_000917872.1;Name=WP_000917872.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459261.1;locus_tag=C9E97_RS01145;product=ribonuclease HI;protein_id=WP_000917872.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	35713	36435	.	-	.	ID=gene-C9E97_RS01150;Name=C9E97_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01150;old_locus_tag=C9E97_01170
NZ_PYKA01000016.1	Protein Homology	CDS	35713	36435	.	-	0	ID=cds-WP_000801238.1;Parent=gene-C9E97_RS01150;Dbxref=GenBank:WP_000801238.1;Name=WP_000801238.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459260.1;locus_tag=C9E97_RS01150;product=class I SAM-dependent methyltransferase;protein_id=WP_000801238.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	36470	37225	.	+	.	ID=gene-C9E97_RS01155;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=C9E97_RS01155;old_locus_tag=C9E97_01175
NZ_PYKA01000016.1	Protein Homology	CDS	36470	37225	.	+	0	ID=cds-WP_001052780.1;Parent=gene-C9E97_RS01155;Dbxref=GenBank:WP_001052780.1;Name=WP_001052780.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459259.1;locus_tag=C9E97_RS01155;product=hydroxyacylglutathione hydrolase;protein_id=WP_001052780.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	37297	38664	.	+	.	ID=gene-C9E97_RS01160;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=C9E97_RS01160;old_locus_tag=C9E97_01180
NZ_PYKA01000016.1	Protein Homology	CDS	37297	38664	.	+	0	ID=cds-WP_000644706.1;Parent=gene-C9E97_RS01160;Dbxref=GenBank:WP_000644706.1;Name=WP_000644706.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459258.1;locus_tag=C9E97_RS01160;product=murein transglycosylase D;protein_id=WP_000644706.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	38720	39490	.	-	.	ID=gene-C9E97_RS01165;Name=C9E97_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01165;old_locus_tag=C9E97_01185
NZ_PYKA01000016.1	Protein Homology	CDS	38720	39490	.	-	0	ID=cds-WP_135369476.1;Parent=gene-C9E97_RS01165;Dbxref=GenBank:WP_135369476.1;Name=WP_135369476.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459257.1;locus_tag=C9E97_RS01165;product=class I SAM-dependent methyltransferase;protein_id=WP_135369476.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	39568	40368	.	-	.	ID=gene-C9E97_RS01170;Name=C9E97_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01170;old_locus_tag=C9E97_01190
NZ_PYKA01000016.1	Protein Homology	CDS	39568	40368	.	-	0	ID=cds-WP_001230970.1;Parent=gene-C9E97_RS01170;Dbxref=GenBank:WP_001230970.1;Name=WP_001230970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=C9E97_RS01170;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001230970.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	40500	41675	.	-	.	ID=gene-C9E97_RS01175;Name=C9E97_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01175;old_locus_tag=C9E97_01195
NZ_PYKA01000016.1	Protein Homology	CDS	40500	41675	.	-	0	ID=cds-WP_135369477.1;Parent=gene-C9E97_RS01175;Dbxref=GenBank:WP_135369477.1;Name=WP_135369477.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459255.1;locus_tag=C9E97_RS01175;product=MFS transporter;protein_id=WP_135369477.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	41780	42694	.	+	.	ID=gene-C9E97_RS01180;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=C9E97_RS01180;old_locus_tag=C9E97_01200
NZ_PYKA01000016.1	Protein Homology	CDS	41780	42694	.	+	0	ID=cds-WP_000648534.1;Parent=gene-C9E97_RS01180;Dbxref=GenBank:WP_000648534.1;Name=WP_000648534.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459254.1;locus_tag=C9E97_RS01180;product=DNA-binding transcriptional regulator YafC;protein_id=WP_000648534.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	42715	43518	.	-	.	ID=gene-C9E97_RS01185;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=C9E97_RS01185;old_locus_tag=C9E97_01205
NZ_PYKA01000016.1	Protein Homology	CDS	42715	43518	.	-	0	ID=cds-WP_135369478.1;Parent=gene-C9E97_RS01185;Dbxref=GenBank:WP_135369478.1;Name=WP_135369478.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459253.1;locus_tag=C9E97_RS01185;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_135369478.1;transl_table=11
NZ_PYKA01000016.1	RefSeq	gene	43683	43759	.	-	.	ID=gene-C9E97_RS01190;Name=C9E97_RS01190;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS01190;old_locus_tag=C9E97_01210
NZ_PYKA01000016.1	tRNAscan-SE	tRNA	43683	43759	.	-	.	ID=rna-C9E97_RS01190;Parent=gene-C9E97_RS01190;anticodon=(pos:complement(43723..43725));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS01190;product=tRNA-Asp
NZ_PYKA01000016.1	tRNAscan-SE	exon	43683	43759	.	-	.	ID=exon-C9E97_RS01190-1;Parent=rna-C9E97_RS01190;anticodon=(pos:complement(43723..43725));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS01190;product=tRNA-Asp
##sequence-region NZ_PYKA01000037.1 1 43588
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000037.1	RefSeq	region	1	43588	.	+	.	ID=NZ_PYKA01000037.1:1..43588;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000037.1	RefSeq	pseudogene	100	322	.	-	.	ID=gene-C9E97_RS23665;Name=C9E97_RS23665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23665;old_locus_tag=C9E97_04830;pseudo=true
NZ_PYKA01000037.1	Protein Homology	CDS	100	322	.	-	0	ID=cds-C9E97_RS23665;Parent=gene-C9E97_RS23665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463181.1;locus_tag=C9E97_RS23665;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	639	932	.	+	.	ID=gene-C9E97_RS04705;Name=C9E97_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04705;old_locus_tag=C9E97_04835
NZ_PYKA01000037.1	Protein Homology	CDS	639	932	.	+	0	ID=cds-WP_001110450.1;Parent=gene-C9E97_RS04705;Dbxref=GenBank:WP_001110450.1;Name=WP_001110450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463182.1;locus_tag=C9E97_RS04705;product=DUF1778 domain-containing protein;protein_id=WP_001110450.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	929	1420	.	+	.	ID=gene-C9E97_RS04710;Name=C9E97_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04710;old_locus_tag=C9E97_04840
NZ_PYKA01000037.1	Protein Homology	CDS	929	1420	.	+	0	ID=cds-WP_000625912.1;Parent=gene-C9E97_RS04710;Dbxref=GenBank:WP_000625912.1;Name=WP_000625912.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463183.1;locus_tag=C9E97_RS04710;product=GNAT family N-acetyltransferase;protein_id=WP_000625912.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	pseudogene	1635	1883	.	+	.	ID=gene-C9E97_RS04715;Name=C9E97_RS04715;end_range=1883,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS04715;old_locus_tag=C9E97_04845;partial=true;pseudo=true;start_range=.,1635
NZ_PYKA01000037.1	Protein Homology	CDS	1635	1883	.	+	0	ID=cds-C9E97_RS04715;Parent=gene-C9E97_RS04715;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1883,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011920327.1;locus_tag=C9E97_RS04715;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,1635;transl_table=11
NZ_PYKA01000037.1	RefSeq	pseudogene	2164	2510	.	-	.	ID=gene-C9E97_RS04720;Name=C9E97_RS04720;end_range=2510,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS04720;old_locus_tag=C9E97_04850;partial=true;pseudo=true;start_range=.,2164
NZ_PYKA01000037.1	Protein Homology	CDS	2164	2510	.	-	0	ID=cds-C9E97_RS04720;Parent=gene-C9E97_RS04720;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2510,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=C9E97_RS04720;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;start_range=.,2164;transl_table=11
NZ_PYKA01000037.1	RefSeq	pseudogene	2527	2670	.	-	.	ID=gene-C9E97_RS04725;Name=C9E97_RS04725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS04725;old_locus_tag=C9E97_04855;partial=true;pseudo=true;start_range=.,2527
NZ_PYKA01000037.1	Protein Homology	CDS	2527	2670	.	-	0	ID=cds-C9E97_RS04725;Parent=gene-C9E97_RS04725;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611389.1;locus_tag=C9E97_RS04725;partial=true;product=transposase;pseudo=true;start_range=.,2527;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	3203	3508	.	+	.	ID=gene-C9E97_RS04730;Name=C9E97_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04730;old_locus_tag=C9E97_04860
NZ_PYKA01000037.1	Protein Homology	CDS	3203	3508	.	+	0	ID=cds-WP_000370555.1;Parent=gene-C9E97_RS04730;Dbxref=GenBank:WP_000370555.1;Name=WP_000370555.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000370555.1;locus_tag=C9E97_RS04730;product=PapB/FocB family fimbrial expression transcriptional regulator;protein_id=WP_000370555.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	3710	4540	.	+	.	ID=gene-C9E97_RS04735;Name=C9E97_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04735;old_locus_tag=C9E97_04865
NZ_PYKA01000037.1	Protein Homology	CDS	3710	4540	.	+	0	ID=cds-WP_023231671.1;Parent=gene-C9E97_RS04735;Dbxref=GenBank:WP_023231671.1;Name=WP_023231671.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673851.1;locus_tag=C9E97_RS04735;product=fimbria/pilus periplasmic chaperone;protein_id=WP_023231671.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	4751	7339	.	+	.	ID=gene-C9E97_RS04740;Name=C9E97_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04740;old_locus_tag=C9E97_04870
NZ_PYKA01000037.1	Protein Homology	CDS	4751	7339	.	+	0	ID=cds-WP_146712888.1;Parent=gene-C9E97_RS04740;Dbxref=GenBank:WP_146712888.1;Name=WP_146712888.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669623.1;locus_tag=C9E97_RS04740;product=fimbria/pilus outer membrane usher protein;protein_id=WP_146712888.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	7359	7796	.	+	.	ID=gene-C9E97_RS04745;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=C9E97_RS04745;old_locus_tag=C9E97_04875
NZ_PYKA01000037.1	Protein Homology	CDS	7359	7796	.	+	0	ID=cds-WP_000191852.1;Parent=gene-C9E97_RS04745;Dbxref=GenBank:WP_000191852.1;Name=WP_000191852.1;gbkey=CDS;gene=afaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000191852.1;locus_tag=C9E97_RS04745;product=AfaD family invasin;protein_id=WP_000191852.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	8496	8963	.	+	.	ID=gene-C9E97_RS04750;Name=C9E97_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04750;old_locus_tag=C9E97_04880
NZ_PYKA01000037.1	Protein Homology	CDS	8496	8963	.	+	0	ID=cds-WP_023231669.1;Parent=gene-C9E97_RS04750;Dbxref=GenBank:WP_023231669.1;Name=WP_023231669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000750458.1;locus_tag=C9E97_RS04750;product=hypothetical protein;protein_id=WP_023231669.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	9144	9803	.	+	.	ID=gene-C9E97_RS04755;Name=C9E97_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04755;old_locus_tag=C9E97_04885
NZ_PYKA01000037.1	Protein Homology	CDS	9144	9803	.	+	0	ID=cds-WP_023231668.1;Parent=gene-C9E97_RS04755;Dbxref=GenBank:WP_023231668.1;Name=WP_023231668.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001663292.1;locus_tag=C9E97_RS04755;product=DsbA family protein;protein_id=WP_023231668.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	9858	10430	.	+	.	ID=gene-C9E97_RS04760;Name=C9E97_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04760;old_locus_tag=C9E97_04890
NZ_PYKA01000037.1	Protein Homology	CDS	9858	10430	.	+	0	ID=cds-WP_000091128.1;Parent=gene-C9E97_RS04760;Dbxref=GenBank:WP_000091128.1;Name=WP_000091128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091127.1;locus_tag=C9E97_RS04760;product=hypothetical protein;protein_id=WP_000091128.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	10503	10715	.	+	.	ID=gene-C9E97_RS04765;Name=C9E97_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04765;old_locus_tag=C9E97_04895
NZ_PYKA01000037.1	Protein Homology	CDS	10503	10715	.	+	0	ID=cds-WP_000063793.1;Parent=gene-C9E97_RS04765;Dbxref=GenBank:WP_000063793.1;Name=WP_000063793.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063792.1;locus_tag=C9E97_RS04765;product=FaeA/PapI family transcriptional regulator;protein_id=WP_000063793.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	10977	11138	.	+	.	ID=gene-C9E97_RS23440;Name=C9E97_RS23440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23440
NZ_PYKA01000037.1	GeneMarkS-2+	CDS	10977	11138	.	+	0	ID=cds-WP_001816720.1;Parent=gene-C9E97_RS23440;Dbxref=GenBank:WP_001816720.1;Name=WP_001816720.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E97_RS23440;product=hypothetical protein;protein_id=WP_001816720.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	11164	12012	.	+	.	ID=gene-C9E97_RS04770;Name=C9E97_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04770;old_locus_tag=C9E97_04900
NZ_PYKA01000037.1	Protein Homology	CDS	11164	12012	.	+	0	ID=cds-WP_000175393.1;Parent=gene-C9E97_RS04770;Dbxref=GenBank:WP_000175393.1;Name=WP_000175393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175395.1;locus_tag=C9E97_RS04770;product=SdiA-regulated domain-containing protein;protein_id=WP_000175393.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	12144	12896	.	-	.	ID=gene-C9E97_RS04775;Name=C9E97_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04775;old_locus_tag=C9E97_04905
NZ_PYKA01000037.1	Protein Homology	CDS	12144	12896	.	-	0	ID=cds-WP_135369161.1;Parent=gene-C9E97_RS04775;Dbxref=GenBank:WP_135369161.1;Name=WP_135369161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463184.1;locus_tag=C9E97_RS04775;product=non-specific acid phosphatase;protein_id=WP_135369161.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	pseudogene	13450	13527	.	+	.	ID=gene-C9E97_RS04780;Name=C9E97_RS04780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS04780;old_locus_tag=C9E97_04910;partial=true;pseudo=true;start_range=.,13450
NZ_PYKA01000037.1	Protein Homology	CDS	13450	13527	.	+	0	ID=cds-C9E97_RS04780;Parent=gene-C9E97_RS04780;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003842122.1;locus_tag=C9E97_RS04780;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,13450;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	13607	13682	.	-	.	ID=gene-C9E97_RS04785;Name=C9E97_RS04785;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS04785;old_locus_tag=C9E97_04915
NZ_PYKA01000037.1	tRNAscan-SE	tRNA	13607	13682	.	-	.	ID=rna-C9E97_RS04785;Parent=gene-C9E97_RS04785;anticodon=(pos:complement(13647..13649));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS04785;product=tRNA-Phe
NZ_PYKA01000037.1	tRNAscan-SE	exon	13607	13682	.	-	.	ID=exon-C9E97_RS04785-1;Parent=rna-C9E97_RS04785;anticodon=(pos:complement(13647..13649));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS04785;product=tRNA-Phe
NZ_PYKA01000037.1	RefSeq	gene	13798	14373	.	-	.	ID=gene-C9E97_RS04790;Name=C9E97_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04790;old_locus_tag=C9E97_04920
NZ_PYKA01000037.1	Protein Homology	CDS	13798	14373	.	-	0	ID=cds-WP_001188509.1;Parent=gene-C9E97_RS04790;Dbxref=GenBank:WP_001188509.1;Name=WP_001188509.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463186.1;locus_tag=C9E97_RS04790;product=transcriptional regulator;protein_id=WP_001188509.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	14410	16113	.	-	.	ID=gene-C9E97_RS04795;Name=C9E97_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04795;old_locus_tag=C9E97_04925
NZ_PYKA01000037.1	Protein Homology	CDS	14410	16113	.	-	0	ID=cds-WP_001651309.1;Parent=gene-C9E97_RS04795;Dbxref=GenBank:WP_001651309.1;Name=WP_001651309.1;Ontology_term=GO:0017004,GO:0009055,GO:0030554,GO:0047134;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,adenyl nucleotide binding|0030554||IEA,protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463187.1;locus_tag=C9E97_RS04795;product=protein-disulfide reductase DsbD;protein_id=WP_001651309.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	16089	16436	.	-	.	ID=gene-C9E97_RS04800;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=C9E97_RS04800;old_locus_tag=C9E97_04930
NZ_PYKA01000037.1	Protein Homology	CDS	16089	16436	.	-	0	ID=cds-WP_000887832.1;Parent=gene-C9E97_RS04800;Dbxref=GenBank:WP_000887832.1;Name=WP_000887832.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463188.1;locus_tag=C9E97_RS04800;product=divalent cation tolerance protein CutA;protein_id=WP_000887832.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	16557	17858	.	-	.	ID=gene-C9E97_RS04805;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=C9E97_RS04805;old_locus_tag=C9E97_04935
NZ_PYKA01000037.1	Protein Homology	CDS	16557	17858	.	-	0	ID=cds-WP_000637595.1;Parent=gene-C9E97_RS04805;Dbxref=GenBank:WP_000637595.1;Name=WP_000637595.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463189.1;locus_tag=C9E97_RS04805;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WP_000637595.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	17973	19409	.	-	.	ID=gene-C9E97_RS04810;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=C9E97_RS04810;old_locus_tag=C9E97_04940
NZ_PYKA01000037.1	Protein Homology	CDS	17973	19409	.	-	0	ID=cds-WP_000069440.1;Parent=gene-C9E97_RS04810;Dbxref=GenBank:WP_000069440.1;Name=WP_000069440.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463190.1;locus_tag=C9E97_RS04810;product=aspartate ammonia-lyase;protein_id=WP_000069440.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	19750	20226	.	+	.	ID=gene-C9E97_RS04815;Name=C9E97_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04815;old_locus_tag=C9E97_04945
NZ_PYKA01000037.1	Protein Homology	CDS	19750	20226	.	+	0	ID=cds-WP_001267291.1;Parent=gene-C9E97_RS04815;Dbxref=GenBank:WP_001267291.1;Name=WP_001267291.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313148.1;locus_tag=C9E97_RS04815;product=FxsA family protein;protein_id=WP_001267291.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	20285	21526	.	-	.	ID=gene-C9E97_RS04820;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=C9E97_RS04820;old_locus_tag=C9E97_04950
NZ_PYKA01000037.1	Protein Homology	CDS	20285	21526	.	-	0	ID=cds-WP_135369524.1;Parent=gene-C9E97_RS04820;Dbxref=GenBank:WP_135369524.1;Name=WP_135369524.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463192.1;locus_tag=C9E97_RS04820;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_135369524.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	21802	22095	.	+	.	ID=gene-C9E97_RS04825;Name=C9E97_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04825;old_locus_tag=C9E97_04955
NZ_PYKA01000037.1	Protein Homology	CDS	21802	22095	.	+	0	ID=cds-WP_000027827.1;Parent=gene-C9E97_RS04825;Dbxref=GenBank:WP_000027827.1;Name=WP_000027827.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=C9E97_RS04825;product=co-chaperone GroES;protein_id=WP_000027827.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	22139	23785	.	+	.	ID=gene-C9E97_RS04830;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=C9E97_RS04830;old_locus_tag=C9E97_04960
NZ_PYKA01000037.1	Protein Homology	CDS	22139	23785	.	+	0	ID=cds-WP_000729126.1;Parent=gene-C9E97_RS04830;Dbxref=GenBank:WP_000729126.1;Name=WP_000729126.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=C9E97_RS04830;product=chaperonin GroEL;protein_id=WP_000729126.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	24029	24382	.	+	.	ID=gene-C9E97_RS04835;Name=C9E97_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04835;old_locus_tag=C9E97_04965
NZ_PYKA01000037.1	Protein Homology	CDS	24029	24382	.	+	0	ID=cds-WP_000558210.1;Parent=gene-C9E97_RS04835;Dbxref=GenBank:WP_000558210.1;Name=WP_000558210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=C9E97_RS04835;product=DUF4156 domain-containing protein;protein_id=WP_000558210.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	24430	25287	.	-	.	ID=gene-C9E97_RS04840;Name=C9E97_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04840;old_locus_tag=C9E97_04970
NZ_PYKA01000037.1	Protein Homology	CDS	24430	25287	.	-	0	ID=cds-WP_001229225.1;Parent=gene-C9E97_RS04840;Dbxref=GenBank:WP_001229225.1;Name=WP_001229225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463196.1;locus_tag=C9E97_RS04840;product=YjeJ family protein;protein_id=WP_001229225.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	25569	26597	.	-	.	ID=gene-C9E97_RS04845;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=C9E97_RS04845;old_locus_tag=C9E97_04975
NZ_PYKA01000037.1	Protein Homology	CDS	25569	26597	.	-	0	ID=cds-WP_079954615.1;Parent=gene-C9E97_RS04845;Dbxref=GenBank:WP_079954615.1;Name=WP_079954615.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463197.1;locus_tag=C9E97_RS04845;product=EF-P beta-lysylation protein EpmB;protein_id=WP_079954615.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	26638	27204	.	+	.	ID=gene-C9E97_RS04850;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=C9E97_RS04850;old_locus_tag=C9E97_04980
NZ_PYKA01000037.1	Protein Homology	CDS	26638	27204	.	+	0	ID=cds-WP_000257282.1;Parent=gene-C9E97_RS04850;Dbxref=GenBank:WP_000257282.1;Name=WP_000257282.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=C9E97_RS04850;product=elongation factor P;protein_id=WP_000257282.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	27265	27399	.	+	.	ID=gene-C9E97_RS04855;Name=C9E97_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04855;old_locus_tag=C9E97_04985
NZ_PYKA01000037.1	Protein Homology	CDS	27265	27399	.	+	0	ID=cds-WP_000977687.1;Parent=gene-C9E97_RS04855;Dbxref=GenBank:WP_000977687.1;Name=WP_000977687.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=C9E97_RS04855;product=entericidin A/B family lipoprotein;protein_id=WP_000977687.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	27507	27653	.	+	.	ID=gene-C9E97_RS04865;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=C9E97_RS04865;old_locus_tag=C9E97_04995
NZ_PYKA01000037.1	Protein Homology	CDS	27507	27653	.	+	0	ID=cds-WP_000239598.1;Parent=gene-C9E97_RS04865;Dbxref=GenBank:WP_000239598.1;Name=WP_000239598.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463200.1;locus_tag=C9E97_RS04865;product=lipoprotein toxin entericidin B;protein_id=WP_000239598.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	27684	28271	.	-	.	ID=gene-C9E97_RS04870;Name=C9E97_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04870;old_locus_tag=C9E97_05000
NZ_PYKA01000037.1	Protein Homology	CDS	27684	28271	.	-	0	ID=cds-WP_000912959.1;Parent=gene-C9E97_RS04870;Dbxref=GenBank:WP_000912959.1;Name=WP_000912959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463201.1;locus_tag=C9E97_RS04870;product=helix-turn-helix transcriptional regulator;protein_id=WP_000912959.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	28527	28844	.	+	.	ID=gene-C9E97_RS04875;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=C9E97_RS04875;old_locus_tag=C9E97_05005
NZ_PYKA01000037.1	Protein Homology	CDS	28527	28844	.	+	0	ID=cds-WP_000118469.1;Parent=gene-C9E97_RS04875;Dbxref=GenBank:WP_000118469.1;Name=WP_000118469.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463202.1;locus_tag=C9E97_RS04875;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_000118469.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	28861	29394	.	-	.	ID=gene-C9E97_RS04880;Name=C9E97_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04880;old_locus_tag=C9E97_05010
NZ_PYKA01000037.1	Protein Homology	CDS	28861	29394	.	-	0	ID=cds-WP_001221670.1;Parent=gene-C9E97_RS04880;Dbxref=GenBank:WP_001221670.1;Name=WP_001221670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463203.1;locus_tag=C9E97_RS04880;product=lipocalin family protein;protein_id=WP_001221670.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	29505	29864	.	-	.	ID=gene-C9E97_RS04885;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=C9E97_RS04885;old_locus_tag=C9E97_05015
NZ_PYKA01000037.1	Protein Homology	CDS	29505	29864	.	-	0	ID=cds-WP_000609650.1;Parent=gene-C9E97_RS04885;Dbxref=GenBank:WP_000609650.1;Name=WP_000609650.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463204.1;locus_tag=C9E97_RS04885;product=fumarate reductase subunit FrdD;protein_id=WP_000609650.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	29875	30270	.	-	.	ID=gene-C9E97_RS04890;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=C9E97_RS04890;old_locus_tag=C9E97_05020
NZ_PYKA01000037.1	Protein Homology	CDS	29875	30270	.	-	0	ID=cds-WP_000208749.1;Parent=gene-C9E97_RS04890;Dbxref=GenBank:WP_000208749.1;Name=WP_000208749.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463205.1;locus_tag=C9E97_RS04890;product=fumarate reductase subunit FrdC;protein_id=WP_000208749.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	30281	31015	.	-	.	ID=gene-C9E97_RS04895;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=C9E97_RS04895;old_locus_tag=C9E97_05025
NZ_PYKA01000037.1	Protein Homology	CDS	30281	31015	.	-	0	ID=cds-WP_000829509.1;Parent=gene-C9E97_RS04895;Dbxref=GenBank:WP_000829509.1;Name=WP_000829509.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=C9E97_RS04895;product=fumarate reductase iron-sulfur protein;protein_id=WP_000829509.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	31008	32798	.	-	.	ID=gene-C9E97_RS04900;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=C9E97_RS04900;old_locus_tag=C9E97_05030
NZ_PYKA01000037.1	Protein Homology	CDS	31008	32798	.	-	0	ID=cds-WP_001192954.1;Parent=gene-C9E97_RS04900;Dbxref=GenBank:WP_001192954.1;Name=WP_001192954.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463207.1;locus_tag=C9E97_RS04900;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_001192954.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	33121	34098	.	+	.	ID=gene-C9E97_RS04905;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=C9E97_RS04905;old_locus_tag=C9E97_05035
NZ_PYKA01000037.1	Protein Homology	CDS	33121	34098	.	+	0	ID=cds-WP_000004797.1;Parent=gene-C9E97_RS04905;Dbxref=GenBank:WP_000004797.1;Name=WP_000004797.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=C9E97_RS04905;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_000004797.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	34324	35826	.	+	.	ID=gene-C9E97_RS04910;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=C9E97_RS04910;old_locus_tag=C9E97_05040
NZ_PYKA01000037.1	Protein Homology	CDS	34324	35826	.	+	0	ID=cds-WP_000149876.1;Parent=gene-C9E97_RS04910;Dbxref=GenBank:WP_000149876.1;Name=WP_000149876.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463209.1;locus_tag=C9E97_RS04910;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_000149876.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	35891	36211	.	+	.	ID=gene-C9E97_RS04915;Name=C9E97_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04915;old_locus_tag=C9E97_05045
NZ_PYKA01000037.1	Protein Homology	CDS	35891	36211	.	+	0	ID=cds-WP_001736544.1;Parent=gene-C9E97_RS04915;Dbxref=GenBank:WP_001736544.1;Name=WP_001736544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001682126.1;locus_tag=C9E97_RS04915;product=hypothetical protein;protein_id=WP_001736544.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	36348	39674	.	-	.	ID=gene-C9E97_RS04920;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=C9E97_RS04920;old_locus_tag=C9E97_05050
NZ_PYKA01000037.1	Protein Homology	CDS	36348	39674	.	-	0	ID=cds-WP_135369525.1;Parent=gene-C9E97_RS04920;Dbxref=GenBank:WP_135369525.1;Name=WP_135369525.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463211.1;locus_tag=C9E97_RS04920;product=miniconductance mechanosensitive channel MscM;protein_id=WP_135369525.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	39693	40661	.	-	.	ID=gene-C9E97_RS04925;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=C9E97_RS04925;old_locus_tag=C9E97_05055
NZ_PYKA01000037.1	Protein Homology	CDS	39693	40661	.	-	0	ID=cds-WP_000934956.1;Parent=gene-C9E97_RS04925;Dbxref=GenBank:WP_000934956.1;Name=WP_000934956.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463212.1;locus_tag=C9E97_RS04925;product=archaetidylserine decarboxylase;protein_id=WP_000934956.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	40753	41805	.	-	.	ID=gene-C9E97_RS04930;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=C9E97_RS04930;old_locus_tag=C9E97_05060
NZ_PYKA01000037.1	Protein Homology	CDS	40753	41805	.	-	0	ID=cds-WP_000041945.1;Parent=gene-C9E97_RS04930;Dbxref=GenBank:WP_000041945.1;Name=WP_000041945.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=C9E97_RS04930;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_000041945.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	41912	42457	.	+	.	ID=gene-C9E97_RS04935;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=C9E97_RS04935;old_locus_tag=C9E97_05065
NZ_PYKA01000037.1	Protein Homology	CDS	41912	42457	.	+	0	ID=cds-WP_001271546.1;Parent=gene-C9E97_RS04935;Dbxref=GenBank:WP_001271546.1;Name=WP_001271546.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=C9E97_RS04935;product=oligoribonuclease;protein_id=WP_001271546.1;transl_table=11
NZ_PYKA01000037.1	RefSeq	gene	42519	43259	.	-	.	ID=gene-C9E97_RS04940;Name=C9E97_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS04940;old_locus_tag=C9E97_05070
NZ_PYKA01000037.1	Protein Homology	CDS	42519	43259	.	-	0	ID=cds-WP_000727897.1;Parent=gene-C9E97_RS04940;Dbxref=GenBank:WP_000727897.1;Name=WP_000727897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463215.3;locus_tag=C9E97_RS04940;product=arginine ABC transporter substrate-binding protein;protein_id=WP_000727897.1;transl_table=11
##sequence-region NZ_PYKA01000083.1 1 43386
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000083.1	RefSeq	region	1	43386	.	+	.	ID=NZ_PYKA01000083.1:1..43386;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000083.1	RefSeq	gene	1	727	.	+	.	ID=gene-C9E97_RS11480;Name=C9E97_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11480;old_locus_tag=C9E97_11745;partial=true;start_range=.,1
NZ_PYKA01000083.1	Protein Homology	CDS	1	727	.	+	1	ID=cds-WP_245304073.1;Parent=gene-C9E97_RS11480;Dbxref=GenBank:WP_245304073.1;Name=WP_245304073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461181.1;locus_tag=C9E97_RS11480;partial=true;product=P-loop NTPase fold protein;protein_id=WP_245304073.1;start_range=.,1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	756	1124	.	-	.	ID=gene-C9E97_RS11485;Name=C9E97_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11485;old_locus_tag=C9E97_11750
NZ_PYKA01000083.1	Protein Homology	CDS	756	1124	.	-	0	ID=cds-WP_135369300.1;Parent=gene-C9E97_RS11485;Dbxref=GenBank:WP_135369300.1;Name=WP_135369300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461182.1;locus_tag=C9E97_RS11485;product=antiterminator Q family protein;protein_id=WP_135369300.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	1139	2128	.	-	.	ID=gene-C9E97_RS11490;Name=C9E97_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11490;old_locus_tag=C9E97_11755
NZ_PYKA01000083.1	Protein Homology	CDS	1139	2128	.	-	0	ID=cds-WP_135369299.1;Parent=gene-C9E97_RS11490;Dbxref=GenBank:WP_135369299.1;Name=WP_135369299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461183.1;locus_tag=C9E97_RS11490;product=DUF968 domain-containing protein;protein_id=WP_135369299.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	2136	2996	.	-	.	ID=gene-C9E97_RS11495;Name=C9E97_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11495;old_locus_tag=C9E97_11760
NZ_PYKA01000083.1	Protein Homology	CDS	2136	2996	.	-	0	ID=cds-WP_135369301.1;Parent=gene-C9E97_RS11495;Dbxref=GenBank:WP_135369301.1;Name=WP_135369301.1;Ontology_term=GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001061457.1;locus_tag=C9E97_RS11495;product=KilA-N domain-containing protein;protein_id=WP_135369301.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	3013	3402	.	-	.	ID=gene-C9E97_RS11500;Name=C9E97_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11500;old_locus_tag=C9E97_11765
NZ_PYKA01000083.1	Protein Homology	CDS	3013	3402	.	-	0	ID=cds-WP_135369298.1;Parent=gene-C9E97_RS11500;Dbxref=GenBank:WP_135369298.1;Name=WP_135369298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000767134.1;locus_tag=C9E97_RS11500;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_135369298.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	3399	5333	.	-	.	ID=gene-C9E97_RS11505;Name=C9E97_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11505;old_locus_tag=C9E97_11770
NZ_PYKA01000083.1	Protein Homology	CDS	3399	5333	.	-	0	ID=cds-WP_135369297.1;Parent=gene-C9E97_RS11505;Dbxref=GenBank:WP_135369297.1;Name=WP_135369297.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034738.1;locus_tag=C9E97_RS11505;product=DNA cytosine methyltransferase;protein_id=WP_135369297.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	5326	6204	.	-	.	ID=gene-C9E97_RS11510;Name=C9E97_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11510;old_locus_tag=C9E97_11775
NZ_PYKA01000083.1	Protein Homology	CDS	5326	6204	.	-	0	ID=cds-WP_046722474.1;Parent=gene-C9E97_RS11510;Dbxref=GenBank:WP_046722474.1;Name=WP_046722474.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762302.1;locus_tag=C9E97_RS11510;product=phage N-6-adenine-methyltransferase;protein_id=WP_046722474.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	6204	6686	.	-	.	ID=gene-C9E97_RS11515;Name=C9E97_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11515;old_locus_tag=C9E97_11780
NZ_PYKA01000083.1	Protein Homology	CDS	6204	6686	.	-	0	ID=cds-WP_001669427.1;Parent=gene-C9E97_RS11515;Dbxref=GenBank:WP_001669427.1;Name=WP_001669427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531318.1;locus_tag=C9E97_RS11515;product=PerC family transcriptional regulator;protein_id=WP_001669427.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	6688	7617	.	-	.	ID=gene-C9E97_RS11520;Name=C9E97_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11520;old_locus_tag=C9E97_11785
NZ_PYKA01000083.1	Protein Homology	CDS	6688	7617	.	-	0	ID=cds-WP_135369296.1;Parent=gene-C9E97_RS11520;Dbxref=GenBank:WP_135369296.1;Name=WP_135369296.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000104949.1;locus_tag=C9E97_RS11520;product=helix-turn-helix domain-containing protein;protein_id=WP_135369296.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	7614	7838	.	-	.	ID=gene-C9E97_RS11525;Name=C9E97_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11525;old_locus_tag=C9E97_11790
NZ_PYKA01000083.1	Protein Homology	CDS	7614	7838	.	-	0	ID=cds-WP_000620702.1;Parent=gene-C9E97_RS11525;Dbxref=GenBank:WP_000620702.1;Name=WP_000620702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001401086.1;locus_tag=C9E97_RS11525;product=hypothetical protein;protein_id=WP_000620702.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	7835	8992	.	-	.	ID=gene-C9E97_RS11530;Name=C9E97_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11530;old_locus_tag=C9E97_11795
NZ_PYKA01000083.1	Protein Homology	CDS	7835	8992	.	-	0	ID=cds-WP_135369295.1;Parent=gene-C9E97_RS11530;Dbxref=GenBank:WP_135369295.1;Name=WP_135369295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001087306.1;locus_tag=C9E97_RS11530;product=Rha family phage regulatory protein;protein_id=WP_135369295.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	8989	9543	.	-	.	ID=gene-C9E97_RS11535;Name=C9E97_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11535;old_locus_tag=C9E97_11800
NZ_PYKA01000083.1	Protein Homology	CDS	8989	9543	.	-	0	ID=cds-WP_000509731.1;Parent=gene-C9E97_RS11535;Dbxref=GenBank:WP_000509731.1;Name=WP_000509731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509732.1;locus_tag=C9E97_RS11535;product=YmfL family putative regulatory protein;protein_id=WP_000509731.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	9572	9796	.	-	.	ID=gene-C9E97_RS11540;Name=C9E97_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11540;old_locus_tag=C9E97_11805
NZ_PYKA01000083.1	Protein Homology	CDS	9572	9796	.	-	0	ID=cds-WP_001191666.1;Parent=gene-C9E97_RS11540;Dbxref=GenBank:WP_001191666.1;Name=WP_001191666.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001191959.1;locus_tag=C9E97_RS11540;product=helix-turn-helix domain-containing protein;protein_id=WP_001191666.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	9894	10589	.	+	.	ID=gene-C9E97_RS11550;Name=C9E97_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11550;old_locus_tag=C9E97_11815
NZ_PYKA01000083.1	Protein Homology	CDS	9894	10589	.	+	0	ID=cds-WP_001020640.1;Parent=gene-C9E97_RS11550;Dbxref=GenBank:WP_001020640.1;Name=WP_001020640.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001358750.1;locus_tag=C9E97_RS11550;product=XRE family transcriptional regulator;protein_id=WP_001020640.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	11403	11774	.	+	.	ID=gene-C9E97_RS11555;Name=C9E97_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11555;old_locus_tag=C9E97_11825
NZ_PYKA01000083.1	Protein Homology	CDS	11403	11774	.	+	0	ID=cds-WP_000997190.1;Parent=gene-C9E97_RS11555;Dbxref=GenBank:WP_000997190.1;Name=WP_000997190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668372.1;locus_tag=C9E97_RS11555;product=hypothetical protein;protein_id=WP_000997190.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	11832	12659	.	+	.	ID=gene-C9E97_RS11560;Name=C9E97_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11560;old_locus_tag=C9E97_11830
NZ_PYKA01000083.1	Protein Homology	CDS	11832	12659	.	+	0	ID=cds-WP_000080410.1;Parent=gene-C9E97_RS11560;Dbxref=GenBank:WP_000080410.1;Name=WP_000080410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080411.1;locus_tag=C9E97_RS11560;product=YfdQ family protein;protein_id=WP_000080410.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	12796	13335	.	+	.	ID=gene-C9E97_RS11565;Name=C9E97_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11565;old_locus_tag=C9E97_11835
NZ_PYKA01000083.1	Protein Homology	CDS	12796	13335	.	+	0	ID=cds-WP_000008352.1;Parent=gene-C9E97_RS11565;Dbxref=GenBank:WP_000008352.1;Name=WP_000008352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000120458.1;locus_tag=C9E97_RS11565;product=hypothetical protein;protein_id=WP_000008352.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	13479	13715	.	+	.	ID=gene-C9E97_RS11570;Name=C9E97_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11570;old_locus_tag=C9E97_11840
NZ_PYKA01000083.1	Protein Homology	CDS	13479	13715	.	+	0	ID=cds-WP_000089141.1;Parent=gene-C9E97_RS11570;Dbxref=GenBank:WP_000089141.1;Name=WP_000089141.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309637.1;locus_tag=C9E97_RS11570;product=excisionase;protein_id=WP_000089141.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	13705	14847	.	+	.	ID=gene-C9E97_RS11575;Name=C9E97_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11575;old_locus_tag=C9E97_11845
NZ_PYKA01000083.1	Protein Homology	CDS	13705	14847	.	+	0	ID=cds-WP_000741325.1;Parent=gene-C9E97_RS11575;Dbxref=GenBank:WP_000741325.1;Name=WP_000741325.1;Ontology_term=GO:0015074,GO:0003677,GO:0008907;gbkey=CDS;go_function=DNA binding|0003677||IEA,integrase activity|0008907||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750633.1;locus_tag=C9E97_RS11575;product=site-specific integrase;protein_id=WP_000741325.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	14961	16211	.	-	.	ID=gene-C9E97_RS11580;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=C9E97_RS11580;old_locus_tag=C9E97_11850
NZ_PYKA01000083.1	Protein Homology	CDS	14961	16211	.	-	0	ID=cds-WP_000444509.1;Parent=gene-C9E97_RS11580;Dbxref=GenBank:WP_000444509.1;Name=WP_000444509.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=C9E97_RS11580;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_000444509.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	16383	17048	.	+	.	ID=gene-C9E97_RS11585;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=C9E97_RS11585;old_locus_tag=C9E97_11855
NZ_PYKA01000083.1	Protein Homology	CDS	16383	17048	.	+	0	ID=cds-WP_001249412.1;Parent=gene-C9E97_RS11585;Dbxref=GenBank:WP_001249412.1;Name=WP_001249412.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460207.1;locus_tag=C9E97_RS11585;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_001249412.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	17045	17374	.	+	.	ID=gene-C9E97_RS11590;Name=C9E97_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11590;old_locus_tag=C9E97_11860
NZ_PYKA01000083.1	Protein Homology	CDS	17045	17374	.	+	0	ID=cds-WP_000825956.1;Parent=gene-C9E97_RS11590;Dbxref=GenBank:WP_000825956.1;Name=WP_000825956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460206.1;locus_tag=C9E97_RS11590;product=lysozyme inhibitor LprI family protein;protein_id=WP_000825956.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	17386	17847	.	+	.	ID=gene-C9E97_RS11595;Name=C9E97_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11595;old_locus_tag=C9E97_11865
NZ_PYKA01000083.1	Protein Homology	CDS	17386	17847	.	+	0	ID=cds-WP_000476064.1;Parent=gene-C9E97_RS11595;Dbxref=GenBank:WP_000476064.1;Name=WP_000476064.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460205.1;locus_tag=C9E97_RS11595;product=NUDIX hydrolase;protein_id=WP_000476064.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	17901	19007	.	+	.	ID=gene-C9E97_RS11600;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=C9E97_RS11600;old_locus_tag=C9E97_11870
NZ_PYKA01000083.1	Protein Homology	CDS	17901	19007	.	+	0	ID=cds-WP_135369294.1;Parent=gene-C9E97_RS11600;Dbxref=GenBank:WP_135369294.1;Name=WP_135369294.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309632.2;locus_tag=C9E97_RS11600;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_135369294.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	19094	19735	.	+	.	ID=gene-C9E97_RS11605;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=C9E97_RS11605;old_locus_tag=C9E97_11875
NZ_PYKA01000083.1	Protein Homology	CDS	19094	19735	.	+	0	ID=cds-WP_001519653.1;Parent=gene-C9E97_RS11605;Dbxref=GenBank:WP_001519653.1;Name=WP_001519653.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=C9E97_RS11605;product=high frequency lysogenization protein HflD;protein_id=WP_001519653.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	19739	21109	.	+	.	ID=gene-C9E97_RS11610;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=C9E97_RS11610;old_locus_tag=C9E97_11880
NZ_PYKA01000083.1	Protein Homology	CDS	19739	21109	.	+	0	ID=cds-WP_000423766.1;Parent=gene-C9E97_RS11610;Dbxref=GenBank:WP_000423766.1;Name=WP_000423766.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=C9E97_RS11610;product=adenylosuccinate lyase;protein_id=WP_000423766.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	21236	21907	.	+	.	ID=gene-C9E97_RS11615;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=C9E97_RS11615;old_locus_tag=C9E97_11885
NZ_PYKA01000083.1	Protein Homology	CDS	21236	21907	.	+	0	ID=cds-WP_001537766.1;Parent=gene-C9E97_RS11615;Dbxref=GenBank:WP_001537766.1;Name=WP_001537766.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707059.1;locus_tag=C9E97_RS11615;product=two-component system response regulator PhoP;protein_id=WP_001537766.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	21907	23370	.	+	.	ID=gene-C9E97_RS11620;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=C9E97_RS11620;old_locus_tag=C9E97_11890
NZ_PYKA01000083.1	Protein Homology	CDS	21907	23370	.	+	0	ID=cds-WP_001031687.1;Parent=gene-C9E97_RS11620;Dbxref=GenBank:WP_001031687.1;Name=WP_001031687.1;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460200.1;locus_tag=C9E97_RS11620;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_001031687.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	23451	24572	.	+	.	ID=gene-C9E97_RS11625;Name=roxA;gbkey=Gene;gene=roxA;gene_biotype=protein_coding;gene_synonym=ycfD;locus_tag=C9E97_RS11625;old_locus_tag=C9E97_11895
NZ_PYKA01000083.1	Protein Homology	CDS	23451	24572	.	+	0	ID=cds-WP_000456527.1;Parent=gene-C9E97_RS11625;Dbxref=GenBank:WP_000456527.1;Name=WP_000456527.1;gbkey=CDS;gene=roxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460199.1;locus_tag=C9E97_RS11625;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;protein_id=WP_000456527.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	24612	25946	.	-	.	ID=gene-C9E97_RS11630;Name=C9E97_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11630;old_locus_tag=C9E97_11900
NZ_PYKA01000083.1	Protein Homology	CDS	24612	25946	.	-	0	ID=cds-WP_135369293.1;Parent=gene-C9E97_RS11630;Dbxref=GenBank:WP_135369293.1;Name=WP_135369293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460198.1;locus_tag=C9E97_RS11630;product=hypothetical protein;protein_id=WP_135369293.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	25950	27179	.	-	.	ID=gene-C9E97_RS11635;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=C9E97_RS11635;old_locus_tag=C9E97_11905
NZ_PYKA01000083.1	Protein Homology	CDS	25950	27179	.	-	0	ID=cds-WP_000359412.1;Parent=gene-C9E97_RS11635;Dbxref=GenBank:WP_000359412.1;Name=WP_000359412.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460197.1;locus_tag=C9E97_RS11635;product=peptidase T;protein_id=WP_000359412.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	27430	28566	.	+	.	ID=gene-C9E97_RS11640;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=C9E97_RS11640;old_locus_tag=C9E97_11910
NZ_PYKA01000083.1	Protein Homology	CDS	27430	28566	.	+	0	ID=cds-WP_000531607.1;Parent=gene-C9E97_RS11640;Dbxref=GenBank:WP_000531607.1;Name=WP_000531607.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460196.1;locus_tag=C9E97_RS11640;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_000531607.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	28550	29413	.	+	.	ID=gene-C9E97_RS11645;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=C9E97_RS11645;old_locus_tag=C9E97_11915
NZ_PYKA01000083.1	Protein Homology	CDS	28550	29413	.	+	0	ID=cds-WP_000799391.1;Parent=gene-C9E97_RS11645;Dbxref=GenBank:WP_000799391.1;Name=WP_000799391.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460195.1;locus_tag=C9E97_RS11645;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_000799391.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	29742	30752	.	+	.	ID=gene-C9E97_RS11650;Name=sifA;gbkey=Gene;gene=sifA;gene_biotype=protein_coding;locus_tag=C9E97_RS11650;old_locus_tag=C9E97_11920
NZ_PYKA01000083.1	Protein Homology	CDS	29742	30752	.	+	0	ID=cds-WP_135369292.1;Parent=gene-C9E97_RS11650;Dbxref=GenBank:WP_135369292.1;Name=WP_135369292.1;gbkey=CDS;gene=sifA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460194.1;locus_tag=C9E97_RS11650;product=SPI-2 type III secretion system effector SifA;protein_id=WP_135369292.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	31068	31847	.	+	.	ID=gene-C9E97_RS11655;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=C9E97_RS11655;old_locus_tag=C9E97_11925
NZ_PYKA01000083.1	Protein Homology	CDS	31068	31847	.	+	0	ID=cds-WP_000580299.1;Parent=gene-C9E97_RS11655;Dbxref=GenBank:WP_000580299.1;Name=WP_000580299.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460193.1;locus_tag=C9E97_RS11655;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_000580299.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	31872	32918	.	+	.	ID=gene-C9E97_RS11660;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=C9E97_RS11660;old_locus_tag=C9E97_11930
NZ_PYKA01000083.1	Protein Homology	CDS	31872	32918	.	+	0	ID=cds-WP_000759329.1;Parent=gene-C9E97_RS11660;Dbxref=GenBank:WP_000759329.1;Name=WP_000759329.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=C9E97_RS11660;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_000759329.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	33000	33821	.	-	.	ID=gene-C9E97_RS11665;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=C9E97_RS11665;old_locus_tag=C9E97_11935
NZ_PYKA01000083.1	Protein Homology	CDS	33000	33821	.	-	0	ID=cds-WP_001191856.1;Parent=gene-C9E97_RS11665;Dbxref=GenBank:WP_001191856.1;Name=WP_001191856.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=C9E97_RS11665;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_001191856.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	33840	34751	.	-	.	ID=gene-C9E97_RS11670;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=C9E97_RS11670;old_locus_tag=C9E97_11940
NZ_PYKA01000083.1	Protein Homology	CDS	33840	34751	.	-	0	ID=cds-WP_000291338.1;Parent=gene-C9E97_RS11670;Dbxref=GenBank:WP_000291338.1;Name=WP_000291338.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460190.1;locus_tag=C9E97_RS11670;product=N-acetylglucosamine kinase;protein_id=WP_000291338.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	34780	36024	.	-	.	ID=gene-C9E97_RS11675;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=C9E97_RS11675;old_locus_tag=C9E97_11945
NZ_PYKA01000083.1	Protein Homology	CDS	34780	36024	.	-	0	ID=cds-WP_000168091.1;Parent=gene-C9E97_RS11675;Dbxref=GenBank:WP_000168091.1;Name=WP_000168091.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460189.1;locus_tag=C9E97_RS11675;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_000168091.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	36024	36725	.	-	.	ID=gene-C9E97_RS11680;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=C9E97_RS11680;old_locus_tag=C9E97_11950
NZ_PYKA01000083.1	Protein Homology	CDS	36024	36725	.	-	0	ID=cds-WP_001033714.1;Parent=gene-C9E97_RS11680;Dbxref=GenBank:WP_001033714.1;Name=WP_001033714.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460188.1;locus_tag=C9E97_RS11680;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_001033714.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	36718	37917	.	-	.	ID=gene-C9E97_RS11685;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=C9E97_RS11685;old_locus_tag=C9E97_11955
NZ_PYKA01000083.1	Protein Homology	CDS	36718	37917	.	-	0	ID=cds-WP_001518787.1;Parent=gene-C9E97_RS11685;Dbxref=GenBank:WP_001518787.1;Name=WP_001518787.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=C9E97_RS11685;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_001518787.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	38255	41701	.	+	.	ID=gene-C9E97_RS11690;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=C9E97_RS11690;old_locus_tag=C9E97_11960
NZ_PYKA01000083.1	Protein Homology	CDS	38255	41701	.	+	0	ID=cds-WP_001114323.1;Parent=gene-C9E97_RS11690;Dbxref=GenBank:WP_001114323.1;Name=WP_001114323.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460186.1;locus_tag=C9E97_RS11690;product=transcription-repair coupling factor;protein_id=WP_001114323.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	41849	42814	.	+	.	ID=gene-C9E97_RS11695;Name=ldtC;gbkey=Gene;gene=ldtC;gene_biotype=protein_coding;locus_tag=C9E97_RS11695;old_locus_tag=C9E97_11965
NZ_PYKA01000083.1	Protein Homology	CDS	41849	42814	.	+	0	ID=cds-WP_000482961.1;Parent=gene-C9E97_RS11695;Dbxref=GenBank:WP_000482961.1;Name=WP_000482961.1;gbkey=CDS;gene=ldtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460185.1;locus_tag=C9E97_RS11695;product=L%2CD-transpeptidase LdtC;protein_id=WP_000482961.1;transl_table=11
NZ_PYKA01000083.1	RefSeq	gene	42911	43168	.	-	.	ID=gene-C9E97_RS11700;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=C9E97_RS11700;old_locus_tag=C9E97_11970
NZ_PYKA01000083.1	Protein Homology	CDS	42911	43168	.	-	0	ID=cds-WP_000800159.1;Parent=gene-C9E97_RS11700;Dbxref=GenBank:WP_000800159.1;Name=WP_000800159.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460184.1;locus_tag=C9E97_RS11700;product=multiple stress resistance protein BhsA;protein_id=WP_000800159.1;transl_table=11
##sequence-region NZ_PYKA01000047.1 1 42468
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000047.1	RefSeq	region	1	42468	.	+	.	ID=NZ_PYKA01000047.1:1..42468;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000047.1	RefSeq	gene	86	322	.	-	.	ID=gene-C9E97_RS06640;Name=C9E97_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06640;old_locus_tag=C9E97_06815
NZ_PYKA01000047.1	Protein Homology	CDS	86	322	.	-	0	ID=cds-WP_000941877.1;Parent=gene-C9E97_RS06640;Dbxref=GenBank:WP_000941877.1;Name=WP_000941877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463411.1;locus_tag=C9E97_RS06640;product=DUF1435 domain-containing protein;protein_id=WP_000941877.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	574	1638	.	+	.	ID=gene-C9E97_RS06645;Name=C9E97_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06645;old_locus_tag=C9E97_06820
NZ_PYKA01000047.1	Protein Homology	CDS	574	1638	.	+	0	ID=cds-WP_000211208.1;Parent=gene-C9E97_RS06645;Dbxref=GenBank:WP_000211208.1;Name=WP_000211208.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463410.1;locus_tag=C9E97_RS06645;product=GGDEF domain-containing protein;protein_id=WP_000211208.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	1759	2547	.	+	.	ID=gene-C9E97_RS06650;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=C9E97_RS06650;old_locus_tag=C9E97_06825
NZ_PYKA01000047.1	Protein Homology	CDS	1759	2547	.	+	0	ID=cds-WP_000331520.1;Parent=gene-C9E97_RS06650;Dbxref=GenBank:WP_000331520.1;Name=WP_000331520.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463409.1;locus_tag=C9E97_RS06650;product=siderophore-iron reductase FhuF;protein_id=WP_000331520.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	2698	3156	.	+	.	ID=gene-C9E97_RS06655;Name=C9E97_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06655;old_locus_tag=C9E97_06830
NZ_PYKA01000047.1	Protein Homology	CDS	2698	3156	.	+	0	ID=cds-WP_000058276.1;Parent=gene-C9E97_RS06655;Dbxref=GenBank:WP_000058276.1;Name=WP_000058276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463408.1;locus_tag=C9E97_RS06655;product=YbaK/EbsC family protein;protein_id=WP_000058276.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	3207	3881	.	-	.	ID=gene-C9E97_RS06660;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=C9E97_RS06660;old_locus_tag=C9E97_06835
NZ_PYKA01000047.1	Protein Homology	CDS	3207	3881	.	-	0	ID=cds-WP_000431546.1;Parent=gene-C9E97_RS06660;Dbxref=GenBank:WP_000431546.1;Name=WP_000431546.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463407.3;locus_tag=C9E97_RS06660;product=DNA-binding transcriptional activator BglJ;protein_id=WP_000431546.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	3842	4567	.	-	.	ID=gene-C9E97_RS06665;Name=C9E97_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06665;old_locus_tag=C9E97_06840
NZ_PYKA01000047.1	Protein Homology	CDS	3842	4567	.	-	0	ID=cds-WP_000936652.1;Parent=gene-C9E97_RS06665;Dbxref=GenBank:WP_000936652.1;Name=WP_000936652.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463406.1;locus_tag=C9E97_RS06665;product=response regulator transcription factor;protein_id=WP_000936652.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	5279	6055	.	+	.	ID=gene-C9E97_RS06670;Name=C9E97_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06670;old_locus_tag=C9E97_06845
NZ_PYKA01000047.1	Protein Homology	CDS	5279	6055	.	+	0	ID=cds-WP_001727653.1;Parent=gene-C9E97_RS06670;Dbxref=GenBank:WP_001727653.1;Name=WP_001727653.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=C9E97_RS06670;product=threonine/serine ThrE exporter family protein;protein_id=WP_001727653.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	6046	6519	.	+	.	ID=gene-C9E97_RS06675;Name=C9E97_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06675;old_locus_tag=C9E97_06850
NZ_PYKA01000047.1	Protein Homology	CDS	6046	6519	.	+	0	ID=cds-WP_050068111.1;Parent=gene-C9E97_RS06675;Dbxref=GenBank:WP_050068111.1;Name=WP_050068111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463404.1;locus_tag=C9E97_RS06675;product=threonine/serine exporter;protein_id=WP_050068111.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	6612	7151	.	+	.	ID=gene-C9E97_RS06680;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=C9E97_RS06680;old_locus_tag=C9E97_06855
NZ_PYKA01000047.1	Protein Homology	CDS	6612	7151	.	+	0	ID=cds-WP_000098578.1;Parent=gene-C9E97_RS06680;Dbxref=GenBank:WP_000098578.1;Name=WP_000098578.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463403.1;locus_tag=C9E97_RS06680;product=primosomal protein DnaT;protein_id=WP_000098578.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	7154	7891	.	+	.	ID=gene-C9E97_RS06685;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=C9E97_RS06685;old_locus_tag=C9E97_06860
NZ_PYKA01000047.1	Protein Homology	CDS	7154	7891	.	+	0	ID=cds-WP_000799924.1;Parent=gene-C9E97_RS06685;Dbxref=GenBank:WP_000799924.1;Name=WP_000799924.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463402.1;locus_tag=C9E97_RS06685;product=DNA replication protein DnaC;protein_id=WP_000799924.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	7949	8410	.	+	.	ID=gene-C9E97_RS06690;Name=C9E97_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06690;old_locus_tag=C9E97_06865
NZ_PYKA01000047.1	Protein Homology	CDS	7949	8410	.	+	0	ID=cds-WP_001090314.1;Parent=gene-C9E97_RS06690;Dbxref=GenBank:WP_001090314.1;Name=WP_001090314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463401.1;locus_tag=C9E97_RS06690;product=DUF2501 domain-containing protein;protein_id=WP_001090314.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	8693	10984	.	+	.	ID=gene-C9E97_RS06695;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=C9E97_RS06695;old_locus_tag=C9E97_06870
NZ_PYKA01000047.1	Protein Homology	CDS	8693	10984	.	+	0	ID=cds-WP_001292725.1;Parent=gene-C9E97_RS06695;Dbxref=GenBank:WP_001292725.1;Name=WP_001292725.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418779.2;locus_tag=C9E97_RS06695;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_001292725.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	11117	12127	.	-	.	ID=gene-C9E97_RS06700;Name=C9E97_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06700;old_locus_tag=C9E97_06875
NZ_PYKA01000047.1	Protein Homology	CDS	11117	12127	.	-	0	ID=cds-WP_000900307.1;Parent=gene-C9E97_RS06700;Dbxref=GenBank:WP_000900307.1;Name=WP_000900307.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224961.1;locus_tag=C9E97_RS06700;product=SIS domain-containing protein;protein_id=WP_000900307.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	12145	13206	.	-	.	ID=gene-C9E97_RS06705;Name=C9E97_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06705;old_locus_tag=C9E97_06880
NZ_PYKA01000047.1	Protein Homology	CDS	12145	13206	.	-	0	ID=cds-WP_135369564.1;Parent=gene-C9E97_RS06705;Dbxref=GenBank:WP_135369564.1;Name=WP_135369564.1;Ontology_term=GO:0005975,GO:0016787,GO:0097367;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463398.1;locus_tag=C9E97_RS06705;product=SIS domain-containing protein;protein_id=WP_135369564.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	13219	14067	.	-	.	ID=gene-C9E97_RS06710;Name=C9E97_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06710;old_locus_tag=C9E97_06885
NZ_PYKA01000047.1	Protein Homology	CDS	13219	14067	.	-	0	ID=cds-WP_000178065.1;Parent=gene-C9E97_RS06710;Dbxref=GenBank:WP_000178065.1;Name=WP_000178065.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224959.1;locus_tag=C9E97_RS06710;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000178065.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	14045	14824	.	-	.	ID=gene-C9E97_RS06715;Name=C9E97_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06715;old_locus_tag=C9E97_06890
NZ_PYKA01000047.1	Protein Homology	CDS	14045	14824	.	-	0	ID=cds-WP_000228866.1;Parent=gene-C9E97_RS06715;Dbxref=GenBank:WP_000228866.1;Name=WP_000228866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463396.1;locus_tag=C9E97_RS06715;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000228866.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	14850	15311	.	-	.	ID=gene-C9E97_RS06720;Name=C9E97_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06720;old_locus_tag=C9E97_06895
NZ_PYKA01000047.1	Protein Homology	CDS	14850	15311	.	-	0	ID=cds-WP_000634729.1;Parent=gene-C9E97_RS06720;Dbxref=GenBank:WP_000634729.1;Name=WP_000634729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463395.1;locus_tag=C9E97_RS06720;product=PTS sugar transporter subunit IIB;protein_id=WP_000634729.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	15326	15748	.	-	.	ID=gene-C9E97_RS06725;Name=C9E97_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06725;old_locus_tag=C9E97_06900
NZ_PYKA01000047.1	Protein Homology	CDS	15326	15748	.	-	0	ID=cds-WP_000820693.1;Parent=gene-C9E97_RS06725;Dbxref=GenBank:WP_000820693.1;Name=WP_000820693.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463394.1;locus_tag=C9E97_RS06725;product=PTS sugar transporter subunit IIA;protein_id=WP_000820693.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	15850	18615	.	-	.	ID=gene-C9E97_RS06730;Name=C9E97_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06730;old_locus_tag=C9E97_06905
NZ_PYKA01000047.1	Protein Homology	CDS	15850	18615	.	-	0	ID=cds-WP_001224204.1;Parent=gene-C9E97_RS06730;Dbxref=GenBank:WP_001224204.1;Name=WP_001224204.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=C9E97_RS06730;product=sigma 54-interacting transcriptional regulator;protein_id=WP_001224204.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	18939	20600	.	-	.	ID=gene-C9E97_RS06740;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=C9E97_RS06740;old_locus_tag=C9E97_06910
NZ_PYKA01000047.1	Protein Homology	CDS	18939	20600	.	-	0	ID=cds-WP_000919511.1;Parent=gene-C9E97_RS06740;Dbxref=GenBank:WP_000919511.1;Name=WP_000919511.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=C9E97_RS06740;product=methyl-accepting chemotaxis protein;protein_id=WP_000919511.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	20967	23117	.	+	.	ID=gene-C9E97_RS06745;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=C9E97_RS06745;old_locus_tag=C9E97_06915
NZ_PYKA01000047.1	Protein Homology	CDS	20967	23117	.	+	0	ID=cds-WP_000379929.1;Parent=gene-C9E97_RS06745;Dbxref=GenBank:WP_000379929.1;Name=WP_000379929.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463391.1;locus_tag=C9E97_RS06745;product=pyruvate/proton symporter BtsT;protein_id=WP_000379929.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	23212	23415	.	+	.	ID=gene-C9E97_RS06750;Name=C9E97_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06750;old_locus_tag=C9E97_06920
NZ_PYKA01000047.1	Protein Homology	CDS	23212	23415	.	+	0	ID=cds-WP_000460616.1;Parent=gene-C9E97_RS06750;Dbxref=GenBank:WP_000460616.1;Name=WP_000460616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463390.1;locus_tag=C9E97_RS06750;product=YbdD/YjiX family protein;protein_id=WP_000460616.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	23426	24382	.	+	.	ID=gene-C9E97_RS06755;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=C9E97_RS06755;old_locus_tag=C9E97_06925
NZ_PYKA01000047.1	Protein Homology	CDS	23426	24382	.	+	0	ID=cds-WP_000187838.1;Parent=gene-C9E97_RS06755;Dbxref=GenBank:WP_000187838.1;Name=WP_000187838.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463389.1;locus_tag=C9E97_RS06755;product=GTPase;protein_id=WP_000187838.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	24498	25466	.	-	.	ID=gene-C9E97_RS06760;Name=C9E97_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06760;old_locus_tag=C9E97_06930
NZ_PYKA01000047.1	Protein Homology	CDS	24498	25466	.	-	0	ID=cds-WP_000452022.1;Parent=gene-C9E97_RS06760;Dbxref=GenBank:WP_000452022.1;Name=WP_000452022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441751.1;locus_tag=C9E97_RS06760;product=hypothetical protein;protein_id=WP_000452022.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	25608	28037	.	+	.	ID=gene-C9E97_RS06765;Name=hsdR;gbkey=Gene;gene=hsdR;gene_biotype=protein_coding;locus_tag=C9E97_RS06765;old_locus_tag=C9E97_06935
NZ_PYKA01000047.1	Protein Homology	CDS	25608	28037	.	+	0	ID=cds-WP_000774451.1;Parent=gene-C9E97_RS06765;Dbxref=GenBank:WP_000774451.1;Name=WP_000774451.1;Ontology_term=GO:0009307,GO:0003678,GO:0015666;gbkey=CDS;gene=hsdR;go_function=DNA helicase activity|0003678||IEA,restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313335.1;locus_tag=C9E97_RS06765;product=EcoAI/FtnUII family type I restriction enzme subunit R;protein_id=WP_000774451.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	28108	29577	.	+	.	ID=gene-C9E97_RS06770;Name=C9E97_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06770;old_locus_tag=C9E97_06940
NZ_PYKA01000047.1	Protein Homology	CDS	28108	29577	.	+	0	ID=cds-WP_080204212.1;Parent=gene-C9E97_RS06770;Dbxref=GenBank:WP_080204212.1;Name=WP_080204212.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000028345.1;locus_tag=C9E97_RS06770;product=N-6 DNA methylase;protein_id=WP_080204212.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	29577	31292	.	+	.	ID=gene-C9E97_RS06775;Name=C9E97_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06775;old_locus_tag=C9E97_06945
NZ_PYKA01000047.1	Protein Homology	CDS	29577	31292	.	+	0	ID=cds-WP_135420167.1;Parent=gene-C9E97_RS06775;Dbxref=GenBank:WP_135420167.1;Name=WP_135420167.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257593.1;locus_tag=C9E97_RS06775;product=restriction endonuclease subunit S;protein_id=WP_135420167.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	31509	31829	.	+	.	ID=gene-C9E97_RS06780;Name=symE;gbkey=Gene;gene=symE;gene_biotype=protein_coding;locus_tag=C9E97_RS06780;old_locus_tag=C9E97_06950
NZ_PYKA01000047.1	Protein Homology	CDS	31509	31829	.	+	0	ID=cds-WP_135369727.1;Parent=gene-C9E97_RS06780;Dbxref=GenBank:WP_135369727.1;Name=WP_135369727.1;gbkey=CDS;gene=symE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551937.1;locus_tag=C9E97_RS06780;product=endoribonuclease SymE;protein_id=WP_135369727.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	31874	33727	.	-	.	ID=gene-C9E97_RS06785;Name=C9E97_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06785;old_locus_tag=C9E97_06955
NZ_PYKA01000047.1	Protein Homology	CDS	31874	33727	.	-	0	ID=cds-WP_135369728.1;Parent=gene-C9E97_RS06785;Dbxref=GenBank:WP_135369728.1;Name=WP_135369728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102841.1;locus_tag=C9E97_RS06785;product=GmrSD restriction endonuclease domain-containing protein;protein_id=WP_135369728.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	33863	34783	.	+	.	ID=gene-C9E97_RS06790;Name=C9E97_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06790;old_locus_tag=C9E97_06960
NZ_PYKA01000047.1	Protein Homology	CDS	33863	34783	.	+	0	ID=cds-WP_135369729.1;Parent=gene-C9E97_RS06790;Dbxref=GenBank:WP_135369729.1;Name=WP_135369729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280241.1;locus_tag=C9E97_RS06790;product=DUF5655 domain-containing protein;protein_id=WP_135369729.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	34860	35024	.	-	.	ID=gene-C9E97_RS06795;Name=yjiS;gbkey=Gene;gene=yjiS;gene_biotype=protein_coding;locus_tag=C9E97_RS06795;old_locus_tag=C9E97_06965
NZ_PYKA01000047.1	Protein Homology	CDS	34860	35024	.	-	0	ID=cds-WP_135369730.1;Parent=gene-C9E97_RS06795;Dbxref=GenBank:WP_135369730.1;Name=WP_135369730.1;gbkey=CDS;gene=yjiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463380.1;locus_tag=C9E97_RS06795;product=DUF1127 domain-containing protein YjiS;protein_id=WP_135369730.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	34991	35134	.	+	.	ID=gene-C9E97_RS06800;Name=C9E97_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06800;old_locus_tag=C9E97_06970
NZ_PYKA01000047.1	Protein Homology	CDS	34991	35134	.	+	0	ID=cds-WP_001541460.1;Parent=gene-C9E97_RS06800;Dbxref=GenBank:WP_001541460.1;Name=WP_001541460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463379.1;locus_tag=C9E97_RS06800;product=hypothetical protein;protein_id=WP_001541460.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	35230	36600	.	-	.	ID=gene-C9E97_RS06805;Name=C9E97_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06805;old_locus_tag=C9E97_06975
NZ_PYKA01000047.1	Protein Homology	CDS	35230	36600	.	-	0	ID=cds-WP_135369731.1;Parent=gene-C9E97_RS06805;Dbxref=GenBank:WP_135369731.1;Name=WP_135369731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331412.1;locus_tag=C9E97_RS06805;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_135369731.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	36781	37734	.	-	.	ID=gene-C9E97_RS06810;Name=C9E97_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06810;old_locus_tag=C9E97_06980
NZ_PYKA01000047.1	Protein Homology	CDS	36781	37734	.	-	0	ID=cds-WP_000749994.1;Parent=gene-C9E97_RS06810;Dbxref=GenBank:WP_000749994.1;Name=WP_000749994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=C9E97_RS06810;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000749994.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	38213	39454	.	+	.	ID=gene-C9E97_RS06815;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=C9E97_RS06815;old_locus_tag=C9E97_06985
NZ_PYKA01000047.1	Protein Homology	CDS	38213	39454	.	+	0	ID=cds-WP_080185044.1;Parent=gene-C9E97_RS06815;Dbxref=GenBank:WP_080185044.1;Name=WP_080185044.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463376.1;locus_tag=C9E97_RS06815;product=multidrug efflux MFS transporter MdtM;protein_id=WP_080185044.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	39541	40812	.	+	.	ID=gene-C9E97_RS06820;Name=C9E97_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06820;old_locus_tag=C9E97_06990
NZ_PYKA01000047.1	Protein Homology	CDS	39541	40812	.	+	0	ID=cds-WP_001033033.1;Parent=gene-C9E97_RS06820;Dbxref=GenBank:WP_001033033.1;Name=WP_001033033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463375.1;locus_tag=C9E97_RS06820;product=DUF445 domain-containing protein;protein_id=WP_001033033.1;transl_table=11
NZ_PYKA01000047.1	RefSeq	gene	41032	42216	.	+	.	ID=gene-C9E97_RS06825;Name=C9E97_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06825;old_locus_tag=C9E97_06995
NZ_PYKA01000047.1	Protein Homology	CDS	41032	42216	.	+	0	ID=cds-WP_135369732.1;Parent=gene-C9E97_RS06825;Dbxref=GenBank:WP_135369732.1;Name=WP_135369732.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463374.1;locus_tag=C9E97_RS06825;product=MFS transporter;protein_id=WP_135369732.1;transl_table=11
##sequence-region NZ_PYKA01000043.1 1 41316
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000043.1	RefSeq	region	1	41316	.	+	.	ID=NZ_PYKA01000043.1:1..41316;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000043.1	RefSeq	gene	1	252	.	+	.	ID=gene-C9E97_RS23560;Name=C9E97_RS23560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23560;old_locus_tag=C9E97_05895;partial=true;start_range=.,1
NZ_PYKA01000043.1	Protein Homology	CDS	1	252	.	+	0	ID=cds-WP_135495707.1;Parent=gene-C9E97_RS23560;Dbxref=GenBank:WP_135495707.1;Name=WP_135495707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=C9E97_RS23560;partial=true;product=hypothetical protein;protein_id=WP_135495707.1;start_range=.,1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	243	584	.	-	.	ID=gene-C9E97_RS05765;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=C9E97_RS05765;old_locus_tag=C9E97_05900
NZ_PYKA01000043.1	Protein Homology	CDS	243	584	.	-	0	ID=cds-WP_047607139.1;Parent=gene-C9E97_RS05765;Dbxref=GenBank:WP_047607139.1;Name=WP_047607139.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460063.1;locus_tag=C9E97_RS05765;product=type III secretion system chaperone SigE;protein_id=WP_047607139.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	601	2286	.	-	.	ID=gene-C9E97_RS05770;Name=sopB;gbkey=Gene;gene=sopB;gene_biotype=protein_coding;locus_tag=C9E97_RS05770;old_locus_tag=C9E97_05905
NZ_PYKA01000043.1	Protein Homology	CDS	601	2286	.	-	0	ID=cds-WP_135369344.1;Parent=gene-C9E97_RS05770;Dbxref=GenBank:WP_135369344.1;Name=WP_135369344.1;gbkey=CDS;gene=sopB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460064.1;locus_tag=C9E97_RS05770;product=SPI-1 type III secretion system effector inositol phosphate phosphatase SopB;protein_id=WP_135369344.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	2620	2790	.	+	.	ID=gene-C9E97_RS05775;Name=C9E97_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05775;old_locus_tag=C9E97_05910
NZ_PYKA01000043.1	Protein Homology	CDS	2620	2790	.	+	0	ID=cds-WP_001111006.1;Parent=gene-C9E97_RS05775;Dbxref=GenBank:WP_001111006.1;Name=WP_001111006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460065.1;locus_tag=C9E97_RS05775;product=YlcI/YnfO family protein;protein_id=WP_001111006.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	2791	2901	.	-	.	ID=gene-C9E97_RS05780;Name=C9E97_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05780;old_locus_tag=C9E97_05915
NZ_PYKA01000043.1	Protein Homology	CDS	2791	2901	.	-	0	ID=cds-WP_000174813.1;Parent=gene-C9E97_RS05780;Dbxref=GenBank:WP_000174813.1;Name=WP_000174813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447525.1;locus_tag=C9E97_RS05780;product=hypothetical protein;protein_id=WP_000174813.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	3010	4479	.	-	.	ID=gene-C9E97_RS05785;Name=C9E97_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05785;old_locus_tag=C9E97_05920
NZ_PYKA01000043.1	Protein Homology	CDS	3010	4479	.	-	0	ID=cds-WP_000760235.1;Parent=gene-C9E97_RS05785;Dbxref=GenBank:WP_000760235.1;Name=WP_000760235.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460067.1;locus_tag=C9E97_RS05785;product=C69 family dipeptidase;protein_id=WP_000760235.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	4652	6016	.	-	.	ID=gene-C9E97_RS05790;Name=C9E97_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05790;old_locus_tag=C9E97_05925
NZ_PYKA01000043.1	Protein Homology	CDS	4652	6016	.	-	0	ID=cds-WP_000240033.1;Parent=gene-C9E97_RS05790;Dbxref=GenBank:WP_000240033.1;Name=WP_000240033.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447527.1;locus_tag=C9E97_RS05790;product=heavy metal sensor histidine kinase;protein_id=WP_000240033.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	6009	6689	.	-	.	ID=gene-C9E97_RS05795;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=C9E97_RS05795;old_locus_tag=C9E97_05930
NZ_PYKA01000043.1	Protein Homology	CDS	6009	6689	.	-	0	ID=cds-WP_135369345.1;Parent=gene-C9E97_RS05795;Dbxref=GenBank:WP_135369345.1;Name=WP_135369345.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698203.1;locus_tag=C9E97_RS05795;product=response regulator transcription factor HprR;protein_id=WP_135369345.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	6825	7235	.	+	.	ID=gene-C9E97_RS05800;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=C9E97_RS05800;old_locus_tag=C9E97_05935
NZ_PYKA01000043.1	Protein Homology	CDS	6825	7235	.	+	0	ID=cds-WP_000833182.1;Parent=gene-C9E97_RS05800;Dbxref=GenBank:WP_000833182.1;Name=WP_000833182.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460070.1;locus_tag=C9E97_RS05800;product=hydroxyisourate hydrolase;protein_id=WP_000833182.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	7568	8080	.	-	.	ID=gene-C9E97_RS05805;Name=C9E97_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05805;old_locus_tag=C9E97_05940
NZ_PYKA01000043.1	Protein Homology	CDS	7568	8080	.	-	0	ID=cds-WP_001195556.1;Parent=gene-C9E97_RS05805;Dbxref=GenBank:WP_001195556.1;Name=WP_001195556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460071.1;locus_tag=C9E97_RS05805;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WP_001195556.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	8098	9660	.	-	.	ID=gene-C9E97_RS05810;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=C9E97_RS05810;old_locus_tag=C9E97_05945
NZ_PYKA01000043.1	Protein Homology	CDS	8098	9660	.	-	0	ID=cds-WP_000801496.1;Parent=gene-C9E97_RS05810;Dbxref=GenBank:WP_000801496.1;Name=WP_000801496.1;Ontology_term=GO:0010124,GO:0016712,GO:0050660;gbkey=CDS;gene=hpaB;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C reduced flavin or flavoprotein as one donor%2C and incorporation of one atom of oxygen|0016712||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=C9E97_RS05810;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_000801496.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	9878	10318	.	-	.	ID=gene-C9E97_RS05815;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=C9E97_RS05815;old_locus_tag=C9E97_05950
NZ_PYKA01000043.1	Protein Homology	CDS	9878	10318	.	-	0	ID=cds-WP_000543922.1;Parent=gene-C9E97_RS05815;Dbxref=GenBank:WP_000543922.1;Name=WP_000543922.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460073.1;locus_tag=C9E97_RS05815;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_000543922.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	10593	11882	.	+	.	ID=gene-C9E97_RS05820;Name=hpaG;gbkey=Gene;gene=hpaG;gene_biotype=protein_coding;locus_tag=C9E97_RS05820;old_locus_tag=C9E97_05955
NZ_PYKA01000043.1	Protein Homology	CDS	10593	11882	.	+	0	ID=cds-WP_135369070.1;Parent=gene-C9E97_RS05820;Dbxref=GenBank:WP_135369070.1;Name=WP_135369070.1;Ontology_term=GO:1901023,GO:0008704,GO:0018800;gbkey=CDS;gene=hpaG;go_function=5-carboxymethyl-2-hydroxymuconate delta-isomerase activity|0008704||IEA,5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase activity|0018800||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460074.1;locus_tag=C9E97_RS05820;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=WP_135369070.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	11879	13345	.	+	.	ID=gene-C9E97_RS05825;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=C9E97_RS05825;old_locus_tag=C9E97_05960
NZ_PYKA01000043.1	Protein Homology	CDS	11879	13345	.	+	0	ID=cds-WP_000723524.1;Parent=gene-C9E97_RS05825;Dbxref=GenBank:WP_000723524.1;Name=WP_000723524.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=C9E97_RS05825;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_000723524.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	13347	14198	.	+	.	ID=gene-C9E97_RS05830;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=C9E97_RS05830;old_locus_tag=C9E97_05965
NZ_PYKA01000043.1	Protein Homology	CDS	13347	14198	.	+	0	ID=cds-WP_000516978.1;Parent=gene-C9E97_RS05830;Dbxref=GenBank:WP_000516978.1;Name=WP_000516978.1;Ontology_term=GO:0008152,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460076.1;locus_tag=C9E97_RS05830;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_000516978.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	14208	14588	.	+	.	ID=gene-C9E97_RS05835;Name=C9E97_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05835;old_locus_tag=C9E97_05970
NZ_PYKA01000043.1	Protein Homology	CDS	14208	14588	.	+	0	ID=cds-WP_001119857.1;Parent=gene-C9E97_RS05835;Dbxref=GenBank:WP_001119857.1;Name=WP_001119857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460077.1;locus_tag=C9E97_RS05835;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_001119857.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	14732	15535	.	+	.	ID=gene-C9E97_RS05845;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=C9E97_RS05845;old_locus_tag=C9E97_05980
NZ_PYKA01000043.1	Protein Homology	CDS	14732	15535	.	+	0	ID=cds-WP_000884795.1;Parent=gene-C9E97_RS05845;Dbxref=GenBank:WP_000884795.1;Name=WP_000884795.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460078.1;locus_tag=C9E97_RS05845;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=WP_000884795.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	15546	16337	.	+	.	ID=gene-C9E97_RS05850;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=C9E97_RS05850;old_locus_tag=C9E97_05985
NZ_PYKA01000043.1	Protein Homology	CDS	15546	16337	.	+	0	ID=cds-WP_000785061.1;Parent=gene-C9E97_RS05850;Dbxref=GenBank:WP_000785061.1;Name=WP_000785061.1;Ontology_term=GO:0010124;gbkey=CDS;gene=hpaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460079.1;locus_tag=C9E97_RS05850;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_000785061.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	16409	17785	.	+	.	ID=gene-C9E97_RS05855;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=C9E97_RS05855;old_locus_tag=C9E97_05990
NZ_PYKA01000043.1	Protein Homology	CDS	16409	17785	.	+	0	ID=cds-WP_135369071.1;Parent=gene-C9E97_RS05855;Dbxref=GenBank:WP_135369071.1;Name=WP_135369071.1;Ontology_term=GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=C9E97_RS05855;product=4-hydroxyphenylacetate permease;protein_id=WP_135369071.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	17795	18691	.	+	.	ID=gene-C9E97_RS05860;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=C9E97_RS05860;old_locus_tag=C9E97_05995
NZ_PYKA01000043.1	Protein Homology	CDS	17795	18691	.	+	0	ID=cds-WP_000336602.1;Parent=gene-C9E97_RS05860;Dbxref=GenBank:WP_000336602.1;Name=WP_000336602.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460081.1;locus_tag=C9E97_RS05860;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WP_000336602.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	18705	19643	.	+	.	ID=gene-C9E97_RS05865;Name=C9E97_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05865;old_locus_tag=C9E97_06000
NZ_PYKA01000043.1	Protein Homology	CDS	18705	19643	.	+	0	ID=cds-WP_135369072.1;Parent=gene-C9E97_RS05865;Dbxref=GenBank:WP_135369072.1;Name=WP_135369072.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460082.1;locus_tag=C9E97_RS05865;product=MBL fold metallo-hydrolase;protein_id=WP_135369072.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	20051	20413	.	-	.	ID=gene-C9E97_RS05870;Name=C9E97_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05870;old_locus_tag=C9E97_06005
NZ_PYKA01000043.1	Protein Homology	CDS	20051	20413	.	-	0	ID=cds-WP_001537781.1;Parent=gene-C9E97_RS05870;Dbxref=GenBank:WP_001537781.1;Name=WP_001537781.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460083.1;locus_tag=C9E97_RS05870;product=anti-adapter protein IraM;protein_id=WP_001537781.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	21067	21372	.	-	.	ID=gene-C9E97_RS05880;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=C9E97_RS05880;old_locus_tag=C9E97_06015
NZ_PYKA01000043.1	Protein Homology	CDS	21067	21372	.	-	0	ID=cds-WP_001284251.1;Parent=gene-C9E97_RS05880;Dbxref=GenBank:WP_001284251.1;Name=WP_001284251.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460084.1;locus_tag=C9E97_RS05880;product=chaperone modulator CbpM;protein_id=WP_001284251.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	21372	22292	.	-	.	ID=gene-C9E97_RS05885;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=C9E97_RS05885;old_locus_tag=C9E97_06020
NZ_PYKA01000043.1	Protein Homology	CDS	21372	22292	.	-	0	ID=cds-WP_000420603.1;Parent=gene-C9E97_RS05885;Dbxref=GenBank:WP_000420603.1;Name=WP_000420603.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460085.1;locus_tag=C9E97_RS05885;product=curved DNA-binding protein;protein_id=WP_000420603.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	22528	22890	.	+	.	ID=gene-C9E97_RS05890;Name=C9E97_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05890;old_locus_tag=C9E97_06030
NZ_PYKA01000043.1	Protein Homology	CDS	22528	22890	.	+	0	ID=cds-WP_001118902.1;Parent=gene-C9E97_RS05890;Dbxref=GenBank:WP_001118902.1;Name=WP_001118902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460086.1;locus_tag=C9E97_RS05890;product=copper resistance protein;protein_id=WP_001118902.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	22939	24825	.	+	.	ID=gene-C9E97_RS05895;Name=C9E97_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05895;old_locus_tag=C9E97_06035
NZ_PYKA01000043.1	Protein Homology	CDS	22939	24825	.	+	0	ID=cds-WP_135420320.1;Parent=gene-C9E97_RS05895;Dbxref=GenBank:WP_135420320.1;Name=WP_135420320.1;Ontology_term=GO:0009055,GO:0015036;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460087.1;locus_tag=C9E97_RS05895;product=protein-disulfide reductase DsbD family protein;protein_id=WP_135420320.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	24822	25445	.	+	.	ID=gene-C9E97_RS05900;Name=C9E97_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05900;old_locus_tag=C9E97_06040
NZ_PYKA01000043.1	Protein Homology	CDS	24822	25445	.	+	0	ID=cds-WP_000876690.1;Parent=gene-C9E97_RS05900;Dbxref=GenBank:WP_000876690.1;Name=WP_000876690.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460088.1;locus_tag=C9E97_RS05900;product=DsbA family protein;protein_id=WP_000876690.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	25435	25941	.	+	.	ID=gene-C9E97_RS05905;Name=C9E97_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05905;old_locus_tag=C9E97_06045
NZ_PYKA01000043.1	Protein Homology	CDS	25435	25941	.	+	0	ID=cds-WP_135369385.1;Parent=gene-C9E97_RS05905;Dbxref=GenBank:WP_135369385.1;Name=WP_135369385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460089.1;locus_tag=C9E97_RS05905;product=protein disulfide oxidoreductase;protein_id=WP_135369385.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	26074	27315	.	+	.	ID=gene-C9E97_RS05910;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=C9E97_RS05910;old_locus_tag=C9E97_06050
NZ_PYKA01000043.1	Protein Homology	CDS	26074	27315	.	+	0	ID=cds-WP_135369384.1;Parent=gene-C9E97_RS05910;Dbxref=GenBank:WP_135369384.1;Name=WP_135369384.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460090.1;locus_tag=C9E97_RS05910;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_135369384.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	27349	27576	.	-	.	ID=gene-C9E97_RS05915;Name=C9E97_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05915;old_locus_tag=C9E97_06055
NZ_PYKA01000043.1	Protein Homology	CDS	27349	27576	.	-	0	ID=cds-WP_001143125.1;Parent=gene-C9E97_RS05915;Dbxref=GenBank:WP_001143125.1;Name=WP_001143125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=C9E97_RS05915;product=YccJ family protein;protein_id=WP_001143125.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	27597	28193	.	-	.	ID=gene-C9E97_RS05920;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=C9E97_RS05920;old_locus_tag=C9E97_06060
NZ_PYKA01000043.1	Protein Homology	CDS	27597	28193	.	-	0	ID=cds-WP_001062898.1;Parent=gene-C9E97_RS05920;Dbxref=GenBank:WP_001062898.1;Name=WP_001062898.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460092.1;locus_tag=C9E97_RS05920;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_001062898.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	28578	28745	.	+	.	ID=gene-C9E97_RS05925;Name=C9E97_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05925;old_locus_tag=C9E97_06065
NZ_PYKA01000043.1	Protein Homology	CDS	28578	28745	.	+	0	ID=cds-WP_001273663.1;Parent=gene-C9E97_RS05925;Dbxref=GenBank:WP_001273663.1;Name=WP_001273663.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460093.1;locus_tag=C9E97_RS05925;product=general stress protein;protein_id=WP_001273663.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	28882	29520	.	+	.	ID=gene-C9E97_RS05930;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=C9E97_RS05930;old_locus_tag=C9E97_06070
NZ_PYKA01000043.1	Protein Homology	CDS	28882	29520	.	+	0	ID=cds-WP_000083128.1;Parent=gene-C9E97_RS05930;Dbxref=GenBank:WP_000083128.1;Name=WP_000083128.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460094.1;locus_tag=C9E97_RS05930;product=HTH-type transcriptional regulator RutR;protein_id=WP_000083128.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	29517	29912	.	-	.	ID=gene-C9E97_RS05935;Name=C9E97_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05935;old_locus_tag=C9E97_06075
NZ_PYKA01000043.1	Protein Homology	CDS	29517	29912	.	-	0	ID=cds-WP_000821059.1;Parent=gene-C9E97_RS05935;Dbxref=GenBank:WP_000821059.1;Name=WP_000821059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460095.1;locus_tag=C9E97_RS05935;product=lysozyme inhibitor LprI family protein;protein_id=WP_000821059.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	29971	33933	.	-	.	ID=gene-C9E97_RS05940;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=C9E97_RS05940;old_locus_tag=C9E97_06080
NZ_PYKA01000043.1	Protein Homology	CDS	29971	33933	.	-	0	ID=cds-WP_020438024.1;Parent=gene-C9E97_RS05940;Dbxref=GenBank:WP_020438024.1;Name=WP_020438024.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447555.1;locus_tag=C9E97_RS05940;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_020438024.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	34355	35863	.	+	.	ID=gene-C9E97_RS05945;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=C9E97_RS05945;old_locus_tag=C9E97_06085
NZ_PYKA01000043.1	Protein Homology	CDS	34355	35863	.	+	0	ID=cds-WP_001018467.1;Parent=gene-C9E97_RS05945;Dbxref=GenBank:WP_001018467.1;Name=WP_001018467.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460097.1;locus_tag=C9E97_RS05945;product=sodium/proline symporter PutP;protein_id=WP_001018467.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	36756	37544	.	+	.	ID=gene-C9E97_RS05950;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=C9E97_RS05950;old_locus_tag=C9E97_06095
NZ_PYKA01000043.1	Protein Homology	CDS	36756	37544	.	+	0	ID=cds-WP_000533526.1;Parent=gene-C9E97_RS05950;Dbxref=GenBank:WP_000533526.1;Name=WP_000533526.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533526.1;locus_tag=C9E97_RS05950;product=phosphate starvation-inducible protein PhoH;protein_id=WP_000533526.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	37893	38552	.	+	.	ID=gene-C9E97_RS05955;Name=C9E97_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05955;old_locus_tag=C9E97_06100
NZ_PYKA01000043.1	Protein Homology	CDS	37893	38552	.	+	0	ID=cds-WP_000009241.1;Parent=gene-C9E97_RS05955;Dbxref=GenBank:WP_000009241.1;Name=WP_000009241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000009241.1;locus_tag=C9E97_RS05955;product=DUF2726 domain-containing protein;protein_id=WP_000009241.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	gene	38602	39857	.	-	.	ID=gene-C9E97_RS05960;Name=C9E97_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05960;old_locus_tag=C9E97_06105
NZ_PYKA01000043.1	Protein Homology	CDS	39506	39857	.	-	0	ID=cds-WP_135369211.1;Parent=gene-C9E97_RS05960;Dbxref=GenBank:WP_135369211.1;Name=WP_135369211.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=C9E97_RS05960;product=IS3-like element ISSen1 family transposase;protein_id=WP_135369211.1;transl_table=11
NZ_PYKA01000043.1	Protein Homology	CDS	38602	39506	.	-	2	ID=cds-WP_135369211.1;Parent=gene-C9E97_RS05960;Dbxref=GenBank:WP_135369211.1;Name=WP_135369211.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=C9E97_RS05960;product=IS3-like element ISSen1 family transposase;protein_id=WP_135369211.1;transl_table=11
NZ_PYKA01000043.1	RefSeq	pseudogene	39975	40275	.	-	.	ID=gene-C9E97_RS05965;Name=C9E97_RS05965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS05965;old_locus_tag=C9E97_06110;pseudo=true
NZ_PYKA01000043.1	Protein Homology	CDS	39975	40275	.	-	0	ID=cds-C9E97_RS05965;Parent=gene-C9E97_RS05965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806398.1;locus_tag=C9E97_RS05965;product=YciI family protein;pseudo=true;transl_table=11
NZ_PYKA01000043.1	RefSeq	pseudogene	40483	41316	.	+	.	ID=gene-C9E97_RS05970;Name=C9E97_RS05970;end_range=41316,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS05970;old_locus_tag=C9E97_06115;partial=true;pseudo=true
NZ_PYKA01000043.1	Protein Homology	CDS	40483	41316	.	+	0	ID=cds-C9E97_RS05970;Parent=gene-C9E97_RS05970;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=41316,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611500.1;locus_tag=C9E97_RS05970;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_PYKA01000063.1 1 40518
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000063.1	RefSeq	region	1	40518	.	+	.	ID=NZ_PYKA01000063.1:1..40518;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000063.1	RefSeq	gene	169	798	.	+	.	ID=gene-C9E97_RS09325;Name=C9E97_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09325;old_locus_tag=C9E97_09520
NZ_PYKA01000063.1	Protein Homology	CDS	169	798	.	+	0	ID=cds-WP_023200971.1;Parent=gene-C9E97_RS09325;Dbxref=GenBank:WP_023200971.1;Name=WP_023200971.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006892400.1;locus_tag=C9E97_RS09325;product=fimbrial protein;protein_id=WP_023200971.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	942	1685	.	+	.	ID=gene-C9E97_RS09330;Name=C9E97_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09330;old_locus_tag=C9E97_09525
NZ_PYKA01000063.1	Protein Homology	CDS	942	1685	.	+	0	ID=cds-WP_000882257.1;Parent=gene-C9E97_RS09330;Dbxref=GenBank:WP_000882257.1;Name=WP_000882257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000882257.1;locus_tag=C9E97_RS09330;product=fimbrial chaperone;protein_id=WP_000882257.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	1706	4306	.	+	.	ID=gene-C9E97_RS09335;Name=C9E97_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09335;old_locus_tag=C9E97_09530
NZ_PYKA01000063.1	Protein Homology	CDS	1706	4306	.	+	0	ID=cds-WP_135369672.1;Parent=gene-C9E97_RS09335;Dbxref=GenBank:WP_135369672.1;Name=WP_135369672.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747525.1;locus_tag=C9E97_RS09335;product=outer membrane usher protein;protein_id=WP_135369672.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	4320	4904	.	+	.	ID=gene-C9E97_RS09340;Name=C9E97_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09340;old_locus_tag=C9E97_09535
NZ_PYKA01000063.1	Protein Homology	CDS	4320	4904	.	+	0	ID=cds-WP_023243747.1;Parent=gene-C9E97_RS09340;Dbxref=GenBank:WP_023243747.1;Name=WP_023243747.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006892398.1;locus_tag=C9E97_RS09340;product=fimbrial protein;protein_id=WP_023243747.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	4919	5527	.	+	.	ID=gene-C9E97_RS09345;Name=C9E97_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09345;old_locus_tag=C9E97_09540
NZ_PYKA01000063.1	Protein Homology	CDS	4919	5527	.	+	0	ID=cds-WP_001080417.1;Parent=gene-C9E97_RS09345;Dbxref=GenBank:WP_001080417.1;Name=WP_001080417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001080417.1;locus_tag=C9E97_RS09345;product=fimbrial protein;protein_id=WP_001080417.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	5543	6136	.	+	.	ID=gene-C9E97_RS09350;Name=C9E97_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09350;old_locus_tag=C9E97_09545
NZ_PYKA01000063.1	Protein Homology	CDS	5543	6136	.	+	0	ID=cds-WP_135369671.1;Parent=gene-C9E97_RS09350;Dbxref=GenBank:WP_135369671.1;Name=WP_135369671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000957977.1;locus_tag=C9E97_RS09350;product=fimbrial-like protein;protein_id=WP_135369671.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	6160	7389	.	+	.	ID=gene-C9E97_RS09355;Name=C9E97_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09355;old_locus_tag=C9E97_09550
NZ_PYKA01000063.1	Protein Homology	CDS	6160	7389	.	+	0	ID=cds-WP_135369670.1;Parent=gene-C9E97_RS09355;Dbxref=GenBank:WP_135369670.1;Name=WP_135369670.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006892393.1;locus_tag=C9E97_RS09355;product=fimbrial protein;protein_id=WP_135369670.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	pseudogene	7733	7867	.	+	.	ID=gene-C9E97_RS24055;Name=C9E97_RS24055;end_range=7867,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS24055;partial=true;pseudo=true
NZ_PYKA01000063.1	Protein Homology	CDS	7733	7867	.	+	0	ID=cds-C9E97_RS24055;Parent=gene-C9E97_RS24055;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=7867,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004149226.1;locus_tag=C9E97_RS24055;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKA01000063.1	RefSeq	pseudogene	7972	8142	.	-	.	ID=gene-C9E97_RS09360;Name=C9E97_RS09360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS09360;old_locus_tag=C9E97_09555;partial=true;pseudo=true;start_range=.,7972
NZ_PYKA01000063.1	Protein Homology	CDS	7972	8142	.	-	0	ID=cds-C9E97_RS09360;Parent=gene-C9E97_RS09360;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611197.1;locus_tag=C9E97_RS09360;partial=true;product=transposase;pseudo=true;start_range=.,7972;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	8193	8351	.	-	.	ID=gene-C9E97_RS23980;Name=C9E97_RS23980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23980
NZ_PYKA01000063.1	Protein Homology	CDS	8193	8351	.	-	0	ID=cds-WP_342365454.1;Parent=gene-C9E97_RS23980;Dbxref=GenBank:WP_342365454.1;Name=WP_342365454.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024750.6;locus_tag=C9E97_RS23980;product=Arm DNA-binding domain-containing protein;protein_id=WP_342365454.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	8580	8674	.	-	.	ID=gene-C9E97_RS09365;Name=C9E97_RS09365;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS09365;old_locus_tag=C9E97_09560
NZ_PYKA01000063.1	tRNAscan-SE	tRNA	8580	8674	.	-	.	ID=rna-C9E97_RS09365;Parent=gene-C9E97_RS09365;anticodon=(pos:complement(8638..8640));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS09365;product=tRNA-Sec
NZ_PYKA01000063.1	tRNAscan-SE	exon	8580	8674	.	-	.	ID=exon-C9E97_RS09365-1;Parent=rna-C9E97_RS09365;anticodon=(pos:complement(8638..8640));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS09365;product=tRNA-Sec
NZ_PYKA01000063.1	RefSeq	gene	8962	10344	.	+	.	ID=gene-C9E97_RS09370;Name=C9E97_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09370;old_locus_tag=C9E97_09565
NZ_PYKA01000063.1	Protein Homology	CDS	8962	10344	.	+	0	ID=cds-WP_000834259.1;Parent=gene-C9E97_RS09370;Dbxref=GenBank:WP_000834259.1;Name=WP_000834259.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462650.1;locus_tag=C9E97_RS09370;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_000834259.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	10356	12674	.	+	.	ID=gene-C9E97_RS09375;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=C9E97_RS09375;old_locus_tag=C9E97_09570
NZ_PYKA01000063.1	Protein Homology	CDS	10356	12674	.	+	0	ID=cds-WP_000703003.1;Parent=gene-C9E97_RS09375;Dbxref=GenBank:WP_000703003.1;Name=WP_000703003.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462649.1;locus_tag=C9E97_RS09375;product=alpha-xylosidase;protein_id=WP_000703003.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	12777	14486	.	-	.	ID=gene-C9E97_RS09380;Name=C9E97_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09380;old_locus_tag=C9E97_09575
NZ_PYKA01000063.1	Protein Homology	CDS	12777	14486	.	-	0	ID=cds-WP_135369669.1;Parent=gene-C9E97_RS09380;Dbxref=GenBank:WP_135369669.1;Name=WP_135369669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462648.1;locus_tag=C9E97_RS09380;product=AsmA family protein;protein_id=WP_135369669.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	14607	15998	.	-	.	ID=gene-C9E97_RS09385;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=C9E97_RS09385;old_locus_tag=C9E97_09580
NZ_PYKA01000063.1	Protein Homology	CDS	14607	15998	.	-	0	ID=cds-WP_000115428.1;Parent=gene-C9E97_RS09385;Dbxref=GenBank:WP_000115428.1;Name=WP_000115428.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462647.1;locus_tag=C9E97_RS09385;product=xanthine/proton symporter XanP;protein_id=WP_000115428.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	16226	17431	.	+	.	ID=gene-C9E97_RS09390;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=C9E97_RS09390;old_locus_tag=C9E97_09585
NZ_PYKA01000063.1	Protein Homology	CDS	16226	17431	.	+	0	ID=cds-WP_000462250.1;Parent=gene-C9E97_RS09390;Dbxref=GenBank:WP_000462250.1;Name=WP_000462250.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507315.1;locus_tag=C9E97_RS09390;product=sodium/glutamate symporter;protein_id=WP_000462250.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	17467	19548	.	-	.	ID=gene-C9E97_RS09395;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=C9E97_RS09395;old_locus_tag=C9E97_09590
NZ_PYKA01000063.1	Protein Homology	CDS	17467	19548	.	-	0	ID=cds-WP_001583320.1;Parent=gene-C9E97_RS09395;Dbxref=GenBank:WP_001583320.1;Name=WP_001583320.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462644.1;locus_tag=C9E97_RS09395;product=ATP-dependent DNA helicase RecG;protein_id=WP_001583320.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	19554	20243	.	-	.	ID=gene-C9E97_RS09400;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=C9E97_RS09400;old_locus_tag=C9E97_09595
NZ_PYKA01000063.1	Protein Homology	CDS	19554	20243	.	-	0	ID=cds-WP_135369668.1;Parent=gene-C9E97_RS09400;Dbxref=GenBank:WP_135369668.1;Name=WP_135369668.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462643.1;locus_tag=C9E97_RS09400;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_135369668.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	20248	22359	.	-	.	ID=gene-C9E97_RS09405;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=C9E97_RS09405;old_locus_tag=C9E97_09600
NZ_PYKA01000063.1	Protein Homology	CDS	20248	22359	.	-	0	ID=cds-WP_000280481.1;Parent=gene-C9E97_RS09405;Dbxref=GenBank:WP_000280481.1;Name=WP_000280481.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=C9E97_RS09405;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_000280481.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	22378	22653	.	-	.	ID=gene-C9E97_RS09410;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=C9E97_RS09410;old_locus_tag=C9E97_09605
NZ_PYKA01000063.1	Protein Homology	CDS	22378	22653	.	-	0	ID=cds-WP_000135058.1;Parent=gene-C9E97_RS09410;Dbxref=GenBank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=C9E97_RS09410;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	22708	23331	.	-	.	ID=gene-C9E97_RS09415;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=C9E97_RS09415;old_locus_tag=C9E97_09610
NZ_PYKA01000063.1	Protein Homology	CDS	22708	23331	.	-	0	ID=cds-WP_000046966.1;Parent=gene-C9E97_RS09415;Dbxref=GenBank:WP_000046966.1;Name=WP_000046966.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=C9E97_RS09415;product=guanylate kinase;protein_id=WP_000046966.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	23588	25273	.	+	.	ID=gene-C9E97_RS09420;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=C9E97_RS09420;old_locus_tag=C9E97_09615
NZ_PYKA01000063.1	Protein Homology	CDS	23588	25273	.	+	0	ID=cds-WP_135369667.1;Parent=gene-C9E97_RS09420;Dbxref=GenBank:WP_135369667.1;Name=WP_135369667.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=C9E97_RS09420;product=NAD-dependent DNA ligase LigB;protein_id=WP_135369667.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	25270	25887	.	-	.	ID=gene-C9E97_RS09425;Name=C9E97_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09425;old_locus_tag=C9E97_09620
NZ_PYKA01000063.1	Protein Homology	CDS	25270	25887	.	-	0	ID=cds-WP_000924334.1;Parent=gene-C9E97_RS09425;Dbxref=GenBank:WP_000924334.1;Name=WP_000924334.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462638.1;locus_tag=C9E97_RS09425;product=trimeric intracellular cation channel family protein;protein_id=WP_000924334.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	26138	27019	.	-	.	ID=gene-C9E97_RS09430;Name=C9E97_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09430;old_locus_tag=C9E97_09625
NZ_PYKA01000063.1	Protein Homology	CDS	26138	27019	.	-	0	ID=cds-WP_135369634.1;Parent=gene-C9E97_RS09430;Dbxref=GenBank:WP_135369634.1;Name=WP_135369634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462637.1;locus_tag=C9E97_RS09430;product=HARLDQ motif MBL-fold protein;protein_id=WP_135369634.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	27093	27995	.	+	.	ID=gene-C9E97_RS09435;Name=C9E97_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09435;old_locus_tag=C9E97_09630
NZ_PYKA01000063.1	Protein Homology	CDS	27093	27995	.	+	0	ID=cds-WP_001748906.1;Parent=gene-C9E97_RS09435;Dbxref=GenBank:WP_001748906.1;Name=WP_001748906.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462636.1;locus_tag=C9E97_RS09435;product=LysR family transcriptional regulator;protein_id=WP_001748906.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	28045	28908	.	-	.	ID=gene-C9E97_RS09440;Name=C9E97_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09440;old_locus_tag=C9E97_09635
NZ_PYKA01000063.1	Protein Homology	CDS	28045	28908	.	-	0	ID=cds-WP_000621352.1;Parent=gene-C9E97_RS09440;Dbxref=GenBank:WP_000621352.1;Name=WP_000621352.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=C9E97_RS09440;product=YicC/YloC family endoribonuclease;protein_id=WP_000621352.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	29034	29750	.	+	.	ID=gene-C9E97_RS09445;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=C9E97_RS09445;old_locus_tag=C9E97_09645
NZ_PYKA01000063.1	Protein Homology	CDS	29034	29750	.	+	0	ID=cds-WP_001247078.1;Parent=gene-C9E97_RS09445;Dbxref=GenBank:WP_001247078.1;Name=WP_001247078.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=C9E97_RS09445;product=ribonuclease PH;protein_id=WP_001247078.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	29829	30470	.	+	.	ID=gene-C9E97_RS09450;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=C9E97_RS09450;old_locus_tag=C9E97_09650
NZ_PYKA01000063.1	Protein Homology	CDS	29829	30470	.	+	0	ID=cds-WP_000806167.1;Parent=gene-C9E97_RS09450;Dbxref=GenBank:WP_000806167.1;Name=WP_000806167.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=C9E97_RS09450;product=orotate phosphoribosyltransferase;protein_id=WP_000806167.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	30548	31144	.	-	.	ID=gene-C9E97_RS09455;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=C9E97_RS09455;old_locus_tag=C9E97_09655
NZ_PYKA01000063.1	Protein Homology	CDS	30548	31144	.	-	0	ID=cds-WP_000818607.1;Parent=gene-C9E97_RS09455;Dbxref=GenBank:WP_000818607.1;Name=WP_000818607.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=C9E97_RS09455;product=nucleoid occlusion factor SlmA;protein_id=WP_000818607.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	31252	31710	.	-	.	ID=gene-C9E97_RS09460;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=C9E97_RS09460;old_locus_tag=C9E97_09660
NZ_PYKA01000063.1	Protein Homology	CDS	31252	31710	.	-	0	ID=cds-WP_000976078.1;Parent=gene-C9E97_RS09460;Dbxref=GenBank:WP_000976078.1;Name=WP_000976078.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=C9E97_RS09460;product=dUTP diphosphatase;protein_id=WP_000976078.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	31688	32908	.	-	.	ID=gene-C9E97_RS09465;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=C9E97_RS09465;old_locus_tag=C9E97_09665
NZ_PYKA01000063.1	Protein Homology	CDS	31688	32908	.	-	0	ID=cds-WP_000050176.1;Parent=gene-C9E97_RS09465;Dbxref=GenBank:WP_000050176.1;Name=WP_000050176.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=C9E97_RS09465;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_000050176.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	33084	33749	.	+	.	ID=gene-C9E97_RS09470;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=C9E97_RS09470;old_locus_tag=C9E97_09670
NZ_PYKA01000063.1	Protein Homology	CDS	33084	33749	.	+	0	ID=cds-WP_000380129.1;Parent=gene-C9E97_RS09470;Dbxref=GenBank:WP_000380129.1;Name=WP_000380129.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462629.1;locus_tag=C9E97_RS09470;product=RadC family protein;protein_id=WP_000380129.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	33967	34203	.	+	.	ID=gene-C9E97_RS09475;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=C9E97_RS09475;old_locus_tag=C9E97_09675
NZ_PYKA01000063.1	Protein Homology	CDS	33967	34203	.	+	0	ID=cds-WP_001519051.1;Parent=gene-C9E97_RS09475;Dbxref=GenBank:WP_001519051.1;Name=WP_001519051.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=C9E97_RS09475;product=50S ribosomal protein L28;protein_id=WP_001519051.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	34224	34391	.	+	.	ID=gene-C9E97_RS09480;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=C9E97_RS09480;old_locus_tag=C9E97_09680
NZ_PYKA01000063.1	Protein Homology	CDS	34224	34391	.	+	0	ID=cds-WP_001051798.1;Parent=gene-C9E97_RS09480;Dbxref=GenBank:WP_001051798.1;Name=WP_001051798.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=C9E97_RS09480;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	34489	35298	.	+	.	ID=gene-C9E97_RS09485;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=C9E97_RS09485;old_locus_tag=C9E97_09685
NZ_PYKA01000063.1	Protein Homology	CDS	34489	35298	.	+	0	ID=cds-WP_001114508.1;Parent=gene-C9E97_RS09485;Dbxref=GenBank:WP_001114508.1;Name=WP_001114508.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462626.1;locus_tag=C9E97_RS09485;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_001114508.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	35325	35804	.	-	.	ID=gene-C9E97_RS09490;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=C9E97_RS09490;old_locus_tag=C9E97_09690
NZ_PYKA01000063.1	Protein Homology	CDS	35325	35804	.	-	0	ID=cds-WP_001171887.1;Parent=gene-C9E97_RS09490;Dbxref=GenBank:WP_001171887.1;Name=WP_001171887.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462625.1;locus_tag=C9E97_RS09490;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001171887.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	35813	37090	.	-	.	ID=gene-C9E97_RS09495;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=C9E97_RS09495;old_locus_tag=C9E97_09695
NZ_PYKA01000063.1	Protein Homology	CDS	35813	37090	.	-	0	ID=cds-WP_001661391.1;Parent=gene-C9E97_RS09495;Dbxref=GenBank:WP_001661391.1;Name=WP_001661391.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462624.1;locus_tag=C9E97_RS09495;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_001661391.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	37499	38569	.	+	.	ID=gene-C9E97_RS09500;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=C9E97_RS09500;old_locus_tag=C9E97_09700
NZ_PYKA01000063.1	Protein Homology	CDS	37499	38569	.	+	0	ID=cds-WP_001526672.1;Parent=gene-C9E97_RS09500;Dbxref=GenBank:WP_001526672.1;Name=WP_001526672.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521713.1;locus_tag=C9E97_RS09500;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WP_001526672.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	38566	39690	.	+	.	ID=gene-C9E97_RS09505;Name=C9E97_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09505;old_locus_tag=C9E97_09705
NZ_PYKA01000063.1	Protein Homology	CDS	38566	39690	.	+	0	ID=cds-WP_135369635.1;Parent=gene-C9E97_RS09505;Dbxref=GenBank:WP_135369635.1;Name=WP_135369635.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462622.1;locus_tag=C9E97_RS09505;product=glycosyltransferase family 4 protein;protein_id=WP_135369635.1;transl_table=11
NZ_PYKA01000063.1	RefSeq	gene	39683	40480	.	+	.	ID=gene-C9E97_RS09510;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=C9E97_RS09510;old_locus_tag=C9E97_09710
NZ_PYKA01000063.1	Protein Homology	CDS	39683	40480	.	+	0	ID=cds-WP_000229830.1;Parent=gene-C9E97_RS09510;Dbxref=GenBank:WP_000229830.1;Name=WP_000229830.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462621.1;locus_tag=C9E97_RS09510;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WP_000229830.1;transl_table=11
##sequence-region NZ_PYKA01000013.1 1 40468
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000013.1	RefSeq	region	1	40468	.	+	.	ID=NZ_PYKA01000013.1:1..40468;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000013.1	RefSeq	gene	205	846	.	-	.	ID=gene-C9E97_RS00645;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=C9E97_RS00645;old_locus_tag=C9E97_00660
NZ_PYKA01000013.1	Protein Homology	CDS	205	846	.	-	0	ID=cds-WP_000284009.1;Parent=gene-C9E97_RS00645;Dbxref=GenBank:WP_000284009.1;Name=WP_000284009.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=C9E97_RS00645;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_000284009.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	946	1209	.	-	.	ID=gene-C9E97_RS00650;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=C9E97_RS00650;old_locus_tag=C9E97_00665
NZ_PYKA01000013.1	Protein Homology	CDS	946	1209	.	-	0	ID=cds-WP_000850547.1;Parent=gene-C9E97_RS00650;Dbxref=GenBank:WP_000850547.1;Name=WP_000850547.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=C9E97_RS00650;product=DUF493 family protein YbeD;protein_id=WP_000850547.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	1318	2529	.	-	.	ID=gene-C9E97_RS00655;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=C9E97_RS00655;old_locus_tag=C9E97_00670
NZ_PYKA01000013.1	Protein Homology	CDS	1318	2529	.	-	0	ID=cds-WP_000858711.1;Parent=gene-C9E97_RS00655;Dbxref=GenBank:WP_000858711.1;Name=WP_000858711.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459629.1;locus_tag=C9E97_RS00655;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_000858711.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	2669	3802	.	-	.	ID=gene-C9E97_RS00660;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=C9E97_RS00660;old_locus_tag=C9E97_00675
NZ_PYKA01000013.1	Protein Homology	CDS	2669	3802	.	-	0	ID=cds-WP_023201922.1;Parent=gene-C9E97_RS00660;Dbxref=GenBank:WP_023201922.1;Name=WP_023201922.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459630.1;locus_tag=C9E97_RS00660;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_023201922.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	3813	4925	.	-	.	ID=gene-C9E97_RS00665;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=C9E97_RS00665;old_locus_tag=C9E97_00680
NZ_PYKA01000013.1	Protein Homology	CDS	3813	4925	.	-	0	ID=cds-WP_000131713.1;Parent=gene-C9E97_RS00665;Dbxref=GenBank:WP_000131713.1;Name=WP_000131713.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=C9E97_RS00665;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_000131713.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	4928	6829	.	-	.	ID=gene-C9E97_RS00670;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=C9E97_RS00670;old_locus_tag=C9E97_00685
NZ_PYKA01000013.1	Protein Homology	CDS	4928	6829	.	-	0	ID=cds-WP_000828700.1;Parent=gene-C9E97_RS00670;Dbxref=GenBank:WP_000828700.1;Name=WP_000828700.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459632.1;locus_tag=C9E97_RS00670;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_000828700.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	6860	7327	.	-	.	ID=gene-C9E97_RS00675;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=C9E97_RS00675;old_locus_tag=C9E97_00690
NZ_PYKA01000013.1	Protein Homology	CDS	6860	7327	.	-	0	ID=cds-WP_000776107.1;Parent=gene-C9E97_RS00675;Dbxref=GenBank:WP_000776107.1;Name=WP_000776107.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=C9E97_RS00675;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_000776107.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	7331	7648	.	-	.	ID=gene-C9E97_RS00680;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=C9E97_RS00680;old_locus_tag=C9E97_00695
NZ_PYKA01000013.1	Protein Homology	CDS	7331	7648	.	-	0	ID=cds-WP_001161670.1;Parent=gene-C9E97_RS00680;Dbxref=GenBank:WP_001161670.1;Name=WP_001161670.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=C9E97_RS00680;product=ribosome silencing factor;protein_id=WP_001161670.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	7977	8585	.	-	.	ID=gene-C9E97_RS00685;Name=C9E97_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00685;old_locus_tag=C9E97_00700
NZ_PYKA01000013.1	Protein Homology	CDS	7977	8585	.	-	0	ID=cds-WP_135369789.1;Parent=gene-C9E97_RS00685;Dbxref=GenBank:WP_135369789.1;Name=WP_135369789.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459635.1;locus_tag=C9E97_RS00685;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_135369789.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	8682	9776	.	+	.	ID=gene-C9E97_RS00690;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=C9E97_RS00690;old_locus_tag=C9E97_00705
NZ_PYKA01000013.1	Protein Homology	CDS	8682	9776	.	+	0	ID=cds-WP_001173259.1;Parent=gene-C9E97_RS00690;Dbxref=GenBank:WP_001173259.1;Name=WP_001173259.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;gene=cobD;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459636.1;locus_tag=C9E97_RS00690;product=threonine-phosphate decarboxylase CobD;protein_id=WP_001173259.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	9751	10392	.	-	.	ID=gene-C9E97_RS00695;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=C9E97_RS00695;old_locus_tag=C9E97_00710
NZ_PYKA01000013.1	Protein Homology	CDS	9751	10392	.	-	0	ID=cds-WP_001518902.1;Parent=gene-C9E97_RS00695;Dbxref=GenBank:WP_001518902.1;Name=WP_001518902.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459637.1;locus_tag=C9E97_RS00695;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_001518902.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	10394	11425	.	-	.	ID=gene-C9E97_RS00700;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=C9E97_RS00700;old_locus_tag=C9E97_00715
NZ_PYKA01000013.1	Protein Homology	CDS	10394	11425	.	-	0	ID=cds-WP_135369788.1;Parent=gene-C9E97_RS00700;Dbxref=GenBank:WP_135369788.1;Name=WP_135369788.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459638.1;locus_tag=C9E97_RS00700;product=DNA polymerase III subunit delta;protein_id=WP_135369788.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	11425	12015	.	-	.	ID=gene-C9E97_RS00705;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=C9E97_RS00705;old_locus_tag=C9E97_00720
NZ_PYKA01000013.1	Protein Homology	CDS	11425	12015	.	-	0	ID=cds-WP_080219684.1;Parent=gene-C9E97_RS00705;Dbxref=GenBank:WP_080219684.1;Name=WP_080219684.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459639.1;locus_tag=C9E97_RS00705;product=LPS assembly lipoprotein LptE;protein_id=WP_080219684.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	12030	14612	.	-	.	ID=gene-C9E97_RS00710;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=C9E97_RS00710;old_locus_tag=C9E97_00725
NZ_PYKA01000013.1	Protein Homology	CDS	12030	14612	.	-	0	ID=cds-WP_001157916.1;Parent=gene-C9E97_RS00710;Dbxref=GenBank:WP_001157916.1;Name=WP_001157916.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=C9E97_RS00710;product=leucine--tRNA ligase;protein_id=WP_001157916.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	14849	15190	.	+	.	ID=gene-C9E97_RS00715;Name=C9E97_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00715;old_locus_tag=C9E97_00730
NZ_PYKA01000013.1	Protein Homology	CDS	14849	15190	.	+	0	ID=cds-WP_001574029.1;Parent=gene-C9E97_RS00715;Dbxref=GenBank:WP_001574029.1;Name=WP_001574029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447100.1;locus_tag=C9E97_RS00715;product=UxaA family hydrolase;protein_id=WP_001574029.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	15207	16379	.	+	.	ID=gene-C9E97_RS00720;Name=C9E97_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00720;old_locus_tag=C9E97_00735
NZ_PYKA01000013.1	Protein Homology	CDS	15207	16379	.	+	0	ID=cds-WP_001670689.1;Parent=gene-C9E97_RS00720;Dbxref=GenBank:WP_001670689.1;Name=WP_001670689.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447101.1;locus_tag=C9E97_RS00720;product=UxaA family hydrolase;protein_id=WP_001670689.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	16429	17382	.	+	.	ID=gene-C9E97_RS00725;Name=C9E97_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00725;old_locus_tag=C9E97_00740
NZ_PYKA01000013.1	Protein Homology	CDS	16429	17382	.	+	0	ID=cds-WP_000694477.1;Parent=gene-C9E97_RS00725;Dbxref=GenBank:WP_000694477.1;Name=WP_000694477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459643.1;locus_tag=C9E97_RS00725;product=2-keto-3-deoxygluconate permease;protein_id=WP_000694477.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	17450	19378	.	+	.	ID=gene-C9E97_RS00730;Name=C9E97_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00730;old_locus_tag=C9E97_00745
NZ_PYKA01000013.1	Protein Homology	CDS	17450	19378	.	+	0	ID=cds-WP_135369787.1;Parent=gene-C9E97_RS00730;Dbxref=GenBank:WP_135369787.1;Name=WP_135369787.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459644.1;locus_tag=C9E97_RS00730;product=sigma-54 interaction domain-containing protein;protein_id=WP_135369787.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	19471	19944	.	+	.	ID=gene-C9E97_RS00735;Name=C9E97_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00735;old_locus_tag=C9E97_00750
NZ_PYKA01000013.1	Protein Homology	CDS	19471	19944	.	+	0	ID=cds-WP_001044884.1;Parent=gene-C9E97_RS00735;Dbxref=GenBank:WP_001044884.1;Name=WP_001044884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=C9E97_RS00735;product=zinc ribbon-containing protein;protein_id=WP_001044884.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	19983	20978	.	-	.	ID=gene-C9E97_RS00740;Name=C9E97_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00740;old_locus_tag=C9E97_00755
NZ_PYKA01000013.1	Protein Homology	CDS	19983	20978	.	-	0	ID=cds-WP_135369786.1;Parent=gene-C9E97_RS00740;Dbxref=GenBank:WP_135369786.1;Name=WP_135369786.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459646.1;locus_tag=C9E97_RS00740;product=tetratricopeptide repeat protein;protein_id=WP_135369786.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	21103	21810	.	+	.	ID=gene-C9E97_RS00745;Name=C9E97_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00745;old_locus_tag=C9E97_00760
NZ_PYKA01000013.1	Protein Homology	CDS	21103	21810	.	+	0	ID=cds-WP_001531467.1;Parent=gene-C9E97_RS00745;Dbxref=GenBank:WP_001531467.1;Name=WP_001531467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459647.1;locus_tag=C9E97_RS00745;product=DUF1266 domain-containing protein;protein_id=WP_001531467.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	pseudogene	21807	23240	.	+	.	ID=gene-C9E97_RS00750;Name=C9E97_RS00750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS00750;old_locus_tag=C9E97_00765;pseudo=true
NZ_PYKA01000013.1	Protein Homology	CDS	21807	23240	.	+	0	ID=cds-C9E97_RS00750;Parent=gene-C9E97_RS00750;Note=internal stop;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459648.1;locus_tag=C9E97_RS00750;product=J domain-containing protein;pseudo=true;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	23252	23956	.	+	.	ID=gene-C9E97_RS00755;Name=C9E97_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00755;old_locus_tag=C9E97_00770
NZ_PYKA01000013.1	Protein Homology	CDS	23252	23956	.	+	0	ID=cds-WP_000356620.1;Parent=gene-C9E97_RS00755;Dbxref=GenBank:WP_000356620.1;Name=WP_000356620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459649.1;locus_tag=C9E97_RS00755;product=DUF1266 domain-containing protein;protein_id=WP_000356620.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	23953	25425	.	+	.	ID=gene-C9E97_RS00760;Name=C9E97_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00760;old_locus_tag=C9E97_00775
NZ_PYKA01000013.1	Protein Homology	CDS	23953	25425	.	+	0	ID=cds-WP_103132974.1;Parent=gene-C9E97_RS00760;Dbxref=GenBank:WP_103132974.1;Name=WP_103132974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459650.1;locus_tag=C9E97_RS00760;product=J domain-containing protein;protein_id=WP_103132974.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	25447	27126	.	-	.	ID=gene-C9E97_RS00765;Name=hscC;gbkey=Gene;gene=hscC;gene_biotype=protein_coding;locus_tag=C9E97_RS00765;old_locus_tag=C9E97_00780
NZ_PYKA01000013.1	Protein Homology	CDS	25447	27126	.	-	0	ID=cds-WP_001523337.1;Parent=gene-C9E97_RS00765;Dbxref=GenBank:WP_001523337.1;Name=WP_001523337.1;gbkey=CDS;gene=hscC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459651.1;locus_tag=C9E97_RS00765;product=molecular chaperone HscC;protein_id=WP_001523337.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	27202	28440	.	-	.	ID=gene-C9E97_RS00770;Name=C9E97_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00770;old_locus_tag=C9E97_00785
NZ_PYKA01000013.1	Protein Homology	CDS	27202	28440	.	-	0	ID=cds-WP_135369785.1;Parent=gene-C9E97_RS00770;Dbxref=GenBank:WP_135369785.1;Name=WP_135369785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459652.1;locus_tag=C9E97_RS00770;product=hypothetical protein;protein_id=WP_135369785.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	28472	29407	.	-	.	ID=gene-C9E97_RS00775;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=C9E97_RS00775;old_locus_tag=C9E97_00790
NZ_PYKA01000013.1	Protein Homology	CDS	28472	29407	.	-	0	ID=cds-WP_021000068.1;Parent=gene-C9E97_RS00775;Dbxref=GenBank:WP_021000068.1;Name=WP_021000068.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459653.1;locus_tag=C9E97_RS00775;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_021000068.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	29524	30249	.	-	.	ID=gene-C9E97_RS00780;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=C9E97_RS00780;old_locus_tag=C9E97_00795
NZ_PYKA01000013.1	Protein Homology	CDS	29524	30249	.	-	0	ID=cds-WP_000631369.1;Parent=gene-C9E97_RS00780;Dbxref=GenBank:WP_000631369.1;Name=WP_000631369.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=C9E97_RS00780;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WP_000631369.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	30249	30923	.	-	.	ID=gene-C9E97_RS00785;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=C9E97_RS00785;old_locus_tag=C9E97_00800
NZ_PYKA01000013.1	Protein Homology	CDS	30249	30923	.	-	0	ID=cds-WP_000272794.1;Parent=gene-C9E97_RS00785;Dbxref=GenBank:WP_000272794.1;Name=WP_000272794.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459655.1;locus_tag=C9E97_RS00785;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_000272794.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	30923	31663	.	-	.	ID=gene-C9E97_RS00790;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=C9E97_RS00790;old_locus_tag=C9E97_00805
NZ_PYKA01000013.1	Protein Homology	CDS	30923	31663	.	-	0	ID=cds-WP_000020930.1;Parent=gene-C9E97_RS00790;Dbxref=GenBank:WP_000020930.1;Name=WP_000020930.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459656.1;locus_tag=C9E97_RS00790;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_000020930.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	31823	32731	.	-	.	ID=gene-C9E97_RS00795;Name=C9E97_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00795;old_locus_tag=C9E97_00810
NZ_PYKA01000013.1	Protein Homology	CDS	31823	32731	.	-	0	ID=cds-WP_001518176.1;Parent=gene-C9E97_RS00795;Dbxref=GenBank:WP_001518176.1;Name=WP_001518176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=C9E97_RS00795;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_001518176.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	33086	34624	.	-	.	ID=gene-C9E97_RS00800;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=C9E97_RS00800;old_locus_tag=C9E97_00815
NZ_PYKA01000013.1	Protein Homology	CDS	33086	34624	.	-	0	ID=cds-WP_135369790.1;Parent=gene-C9E97_RS00800;Dbxref=GenBank:WP_135369790.1;Name=WP_135369790.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459658.1;locus_tag=C9E97_RS00800;product=apolipoprotein N-acyltransferase;protein_id=WP_135369790.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	34644	35522	.	-	.	ID=gene-C9E97_RS00805;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=C9E97_RS00805;old_locus_tag=C9E97_00820
NZ_PYKA01000013.1	Protein Homology	CDS	34644	35522	.	-	0	ID=cds-WP_001278612.1;Parent=gene-C9E97_RS00805;Dbxref=GenBank:WP_001278612.1;Name=WP_001278612.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459659.1;locus_tag=C9E97_RS00805;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_001278612.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	35680	36153	.	-	.	ID=gene-C9E97_RS00810;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=C9E97_RS00810;old_locus_tag=C9E97_00825
NZ_PYKA01000013.1	Protein Homology	CDS	35680	36153	.	-	0	ID=cds-WP_000084477.1;Parent=gene-C9E97_RS00810;Dbxref=GenBank:WP_000084477.1;Name=WP_000084477.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459660.1;locus_tag=C9E97_RS00810;product=rRNA maturation RNase YbeY;protein_id=WP_000084477.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	36150	37196	.	-	.	ID=gene-C9E97_RS00815;Name=C9E97_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00815;old_locus_tag=C9E97_00830
NZ_PYKA01000013.1	Protein Homology	CDS	36150	37196	.	-	0	ID=cds-WP_001018045.1;Parent=gene-C9E97_RS00815;Dbxref=GenBank:WP_001018045.1;Name=WP_001018045.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225825.1;locus_tag=C9E97_RS00815;product=PhoH family protein;protein_id=WP_001018045.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	37401	38825	.	-	.	ID=gene-C9E97_RS00820;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=C9E97_RS00820;old_locus_tag=C9E97_00835
NZ_PYKA01000013.1	Protein Homology	CDS	37401	38825	.	-	0	ID=cds-WP_001575805.1;Parent=gene-C9E97_RS00820;Dbxref=GenBank:WP_001575805.1;Name=WP_001575805.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=C9E97_RS00820;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_001575805.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	38969	40144	.	+	.	ID=gene-C9E97_RS00825;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=C9E97_RS00825;old_locus_tag=C9E97_00840
NZ_PYKA01000013.1	Protein Homology	CDS	38969	40144	.	+	0	ID=cds-WP_000184633.1;Parent=gene-C9E97_RS00825;Dbxref=GenBank:WP_000184633.1;Name=WP_000184633.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459663.1;locus_tag=C9E97_RS00825;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_000184633.1;transl_table=11
NZ_PYKA01000013.1	RefSeq	gene	40275	40349	.	-	.	ID=gene-C9E97_RS00830;Name=C9E97_RS00830;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS00830;old_locus_tag=C9E97_00845
NZ_PYKA01000013.1	tRNAscan-SE	tRNA	40275	40349	.	-	.	ID=rna-C9E97_RS00830;Parent=gene-C9E97_RS00830;anticodon=(pos:complement(40315..40317));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS00830;product=tRNA-Gln
NZ_PYKA01000013.1	tRNAscan-SE	exon	40275	40349	.	-	.	ID=exon-C9E97_RS00830-1;Parent=rna-C9E97_RS00830;anticodon=(pos:complement(40315..40317));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS00830;product=tRNA-Gln
NZ_PYKA01000013.1	RefSeq	gene	40393	40467	.	-	.	ID=gene-C9E97_RS00835;Name=C9E97_RS00835;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS00835;old_locus_tag=C9E97_00850
NZ_PYKA01000013.1	tRNAscan-SE	tRNA	40393	40467	.	-	.	ID=rna-C9E97_RS00835;Parent=gene-C9E97_RS00835;anticodon=(pos:complement(40433..40435));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS00835;product=tRNA-Gln
NZ_PYKA01000013.1	tRNAscan-SE	exon	40393	40467	.	-	.	ID=exon-C9E97_RS00835-1;Parent=rna-C9E97_RS00835;anticodon=(pos:complement(40433..40435));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS00835;product=tRNA-Gln
##sequence-region NZ_PYKA01000115.1 1 157180
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000115.1	RefSeq	region	1	157180	.	+	.	ID=NZ_PYKA01000115.1:1..157180;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000115.1	RefSeq	gene	351	1499	.	+	.	ID=gene-C9E97_RS17260;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=C9E97_RS17260;old_locus_tag=C9E97_17625
NZ_PYKA01000115.1	Protein Homology	CDS	351	1499	.	+	0	ID=cds-WP_135369437.1;Parent=gene-C9E97_RS17260;Dbxref=GenBank:WP_135369437.1;Name=WP_135369437.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459071.1;locus_tag=C9E97_RS17260;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_135369437.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	1518	4745	.	+	.	ID=gene-C9E97_RS17265;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=C9E97_RS17265;old_locus_tag=C9E97_17630
NZ_PYKA01000115.1	Protein Homology	CDS	1518	4745	.	+	0	ID=cds-WP_001126310.1;Parent=gene-C9E97_RS17265;Dbxref=GenBank:WP_001126310.1;Name=WP_001126310.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=C9E97_RS17265;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_001126310.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	5019	5414	.	+	.	ID=gene-C9E97_RS17270;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=C9E97_RS17270;old_locus_tag=C9E97_17635
NZ_PYKA01000115.1	Protein Homology	CDS	5019	5414	.	+	0	ID=cds-WP_000333324.1;Parent=gene-C9E97_RS17270;Dbxref=GenBank:WP_000333324.1;Name=WP_000333324.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459073.1;locus_tag=C9E97_RS17270;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_000333324.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	5492	6088	.	-	.	ID=gene-C9E97_RS17275;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=C9E97_RS17275;old_locus_tag=C9E97_17640
NZ_PYKA01000115.1	Protein Homology	CDS	5492	6088	.	-	0	ID=cds-WP_000122863.1;Parent=gene-C9E97_RS17275;Dbxref=GenBank:WP_000122863.1;Name=WP_000122863.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459074.1;locus_tag=C9E97_RS17275;product=carnitine operon protein CaiE;protein_id=WP_000122863.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	6198	6983	.	-	.	ID=gene-C9E97_RS17280;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=C9E97_RS17280;old_locus_tag=C9E97_17645
NZ_PYKA01000115.1	Protein Homology	CDS	6198	6983	.	-	0	ID=cds-WP_000004376.1;Parent=gene-C9E97_RS17280;Dbxref=GenBank:WP_000004376.1;Name=WP_000004376.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=C9E97_RS17280;product=crotonobetainyl-CoA hydratase;protein_id=WP_000004376.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	7037	8590	.	-	.	ID=gene-C9E97_RS17285;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=C9E97_RS17285;old_locus_tag=C9E97_17650
NZ_PYKA01000115.1	Protein Homology	CDS	7037	8590	.	-	0	ID=cds-WP_135369438.1;Parent=gene-C9E97_RS17285;Dbxref=GenBank:WP_135369438.1;Name=WP_135369438.1;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459076.1;locus_tag=C9E97_RS17285;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_135369438.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	8653	9870	.	-	.	ID=gene-C9E97_RS17290;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=C9E97_RS17290;old_locus_tag=C9E97_17655
NZ_PYKA01000115.1	Protein Homology	CDS	8653	9870	.	-	0	ID=cds-WP_001016212.1;Parent=gene-C9E97_RS17290;Dbxref=GenBank:WP_001016212.1;Name=WP_001016212.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459077.1;locus_tag=C9E97_RS17290;product=L-carnitine CoA-transferase;protein_id=WP_001016212.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	9982	11124	.	-	.	ID=gene-C9E97_RS17295;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=C9E97_RS17295;old_locus_tag=C9E97_17660
NZ_PYKA01000115.1	Protein Homology	CDS	9982	11124	.	-	0	ID=cds-WP_005124373.1;Parent=gene-C9E97_RS17295;Dbxref=GenBank:WP_005124373.1;Name=WP_005124373.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=C9E97_RS17295;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_005124373.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	11159	12676	.	-	.	ID=gene-C9E97_RS17300;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=C9E97_RS17300;old_locus_tag=C9E97_17665
NZ_PYKA01000115.1	Protein Homology	CDS	11159	12676	.	-	0	ID=cds-WP_000787073.1;Parent=gene-C9E97_RS17300;Dbxref=GenBank:WP_000787073.1;Name=WP_000787073.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459079.1;locus_tag=C9E97_RS17300;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WP_000787073.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	13157	13927	.	+	.	ID=gene-C9E97_RS17305;Name=C9E97_RS17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17305;old_locus_tag=C9E97_17670
NZ_PYKA01000115.1	Protein Homology	CDS	13157	13927	.	+	0	ID=cds-WP_071055485.1;Parent=gene-C9E97_RS17305;Dbxref=GenBank:WP_071055485.1;Name=WP_071055485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459080.1;locus_tag=C9E97_RS17305;product=electron transfer flavoprotein FixA;protein_id=WP_071055485.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	13943	14884	.	+	.	ID=gene-C9E97_RS17310;Name=C9E97_RS17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17310;old_locus_tag=C9E97_17675
NZ_PYKA01000115.1	Protein Homology	CDS	13943	14884	.	+	0	ID=cds-WP_001032198.1;Parent=gene-C9E97_RS17310;Dbxref=GenBank:WP_001032198.1;Name=WP_001032198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459081.1;locus_tag=C9E97_RS17310;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_001032198.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	14934	16220	.	+	.	ID=gene-C9E97_RS17315;Name=C9E97_RS17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17315;old_locus_tag=C9E97_17680
NZ_PYKA01000115.1	Protein Homology	CDS	14934	16220	.	+	0	ID=cds-WP_058108076.1;Parent=gene-C9E97_RS17315;Dbxref=GenBank:WP_058108076.1;Name=WP_058108076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459082.1;locus_tag=C9E97_RS17315;product=FAD-dependent oxidoreductase;protein_id=WP_058108076.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	16217	16504	.	+	.	ID=gene-C9E97_RS17320;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=C9E97_RS17320;old_locus_tag=C9E97_17685
NZ_PYKA01000115.1	Protein Homology	CDS	16217	16504	.	+	0	ID=cds-WP_000203736.1;Parent=gene-C9E97_RS17320;Dbxref=GenBank:WP_000203736.1;Name=WP_000203736.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459083.1;locus_tag=C9E97_RS17320;product=ferredoxin-like protein FixX;protein_id=WP_000203736.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	16651	17991	.	+	.	ID=gene-C9E97_RS17325;Name=C9E97_RS17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17325;old_locus_tag=C9E97_17690
NZ_PYKA01000115.1	Protein Homology	CDS	16651	17991	.	+	0	ID=cds-WP_001187057.1;Parent=gene-C9E97_RS17325;Dbxref=GenBank:WP_001187057.1;Name=WP_001187057.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459084.1;locus_tag=C9E97_RS17325;product=MFS transporter;protein_id=WP_001187057.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	18080	18310	.	+	.	ID=gene-C9E97_RS17330;Name=C9E97_RS17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17330;old_locus_tag=C9E97_17695
NZ_PYKA01000115.1	Protein Homology	CDS	18080	18310	.	+	0	ID=cds-WP_001172089.1;Parent=gene-C9E97_RS17330;Dbxref=GenBank:WP_001172089.1;Name=WP_001172089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459085.1;locus_tag=C9E97_RS17330;product=YgdI/YgdR family lipoprotein;protein_id=WP_001172089.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	18604	19020	.	+	.	ID=gene-C9E97_RS17335;Name=C9E97_RS17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17335;old_locus_tag=C9E97_17700
NZ_PYKA01000115.1	Protein Homology	CDS	18604	19020	.	+	0	ID=cds-WP_135369279.1;Parent=gene-C9E97_RS17335;Dbxref=GenBank:WP_135369279.1;Name=WP_135369279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459086.1;locus_tag=C9E97_RS17335;product=hypothetical protein;protein_id=WP_135369279.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	19244	19534	.	-	.	ID=gene-C9E97_RS17340;Name=srfN;gbkey=Gene;gene=srfN;gene_biotype=protein_coding;locus_tag=C9E97_RS17340;old_locus_tag=C9E97_17705
NZ_PYKA01000115.1	Protein Homology	CDS	19244	19534	.	-	0	ID=cds-WP_000745961.1;Parent=gene-C9E97_RS17340;Dbxref=GenBank:WP_000745961.1;Name=WP_000745961.1;gbkey=CDS;gene=srfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459087.1;locus_tag=C9E97_RS17340;product=DUF1471 family virulence protein SrfN;protein_id=WP_000745961.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	20432	22321	.	+	.	ID=gene-C9E97_RS17345;Name=C9E97_RS17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17345;old_locus_tag=C9E97_17715
NZ_PYKA01000115.1	Protein Homology	CDS	20432	22321	.	+	0	ID=cds-WP_000066315.1;Parent=gene-C9E97_RS17345;Dbxref=GenBank:WP_000066315.1;Name=WP_000066315.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459089.1;locus_tag=C9E97_RS17345;product=sulfatase-like hydrolase/transferase;protein_id=WP_000066315.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	pseudogene	22673	22753	.	-	.	ID=gene-C9E97_RS24095;Name=C9E97_RS24095;end_range=22753,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS24095;old_locus_tag=C9E97_17725;partial=true;pseudo=true
NZ_PYKA01000115.1	Protein Homology	CDS	22673	22753	.	-	0	ID=cds-C9E97_RS24095;Parent=gene-C9E97_RS24095;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=22753,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=C9E97_RS24095;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	22874	23404	.	+	.	ID=gene-C9E97_RS17350;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=C9E97_RS17350;old_locus_tag=C9E97_17730
NZ_PYKA01000115.1	Protein Homology	CDS	22874	23404	.	+	0	ID=cds-WP_000600709.1;Parent=gene-C9E97_RS17350;Dbxref=GenBank:WP_000600709.1;Name=WP_000600709.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=C9E97_RS17350;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_000600709.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	23397	25259	.	+	.	ID=gene-C9E97_RS17355;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=C9E97_RS17355;old_locus_tag=C9E97_17735
NZ_PYKA01000115.1	Protein Homology	CDS	23397	25259	.	+	0	ID=cds-WP_000377165.1;Parent=gene-C9E97_RS17355;Dbxref=GenBank:WP_000377165.1;Name=WP_000377165.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459091.1;locus_tag=C9E97_RS17355;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_000377165.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	25457	25936	.	+	.	ID=gene-C9E97_RS17360;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=C9E97_RS17360;old_locus_tag=C9E97_17745
NZ_PYKA01000115.1	Protein Homology	CDS	25457	25936	.	+	0	ID=cds-WP_000624379.1;Parent=gene-C9E97_RS17360;Dbxref=GenBank:WP_000624379.1;Name=WP_000624379.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=C9E97_RS17360;product=type 3 dihydrofolate reductase;protein_id=WP_000624379.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	26042	26890	.	-	.	ID=gene-C9E97_RS17365;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=C9E97_RS17365;old_locus_tag=C9E97_17750
NZ_PYKA01000115.1	Protein Homology	CDS	26042	26890	.	-	0	ID=cds-WP_000257211.1;Parent=gene-C9E97_RS17365;Dbxref=GenBank:WP_000257211.1;Name=WP_000257211.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459093.1;locus_tag=C9E97_RS17365;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_000257211.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	26901	27278	.	-	.	ID=gene-C9E97_RS17370;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=C9E97_RS17370;old_locus_tag=C9E97_17755
NZ_PYKA01000115.1	Protein Homology	CDS	26901	27278	.	-	0	ID=cds-WP_000610894.1;Parent=gene-C9E97_RS17370;Dbxref=GenBank:WP_000610894.1;Name=WP_000610894.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459094.1;locus_tag=C9E97_RS17370;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_000610894.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	27281	28102	.	-	.	ID=gene-C9E97_RS17375;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=C9E97_RS17375;old_locus_tag=C9E97_17760
NZ_PYKA01000115.1	Protein Homology	CDS	27281	28102	.	-	0	ID=cds-WP_001065397.1;Parent=gene-C9E97_RS17375;Dbxref=GenBank:WP_001065397.1;Name=WP_001065397.1;Ontology_term=GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459095.1;locus_tag=C9E97_RS17375;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001065397.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	28099	29088	.	-	.	ID=gene-C9E97_RS17380;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=C9E97_RS17380;old_locus_tag=C9E97_17765
NZ_PYKA01000115.1	Protein Homology	CDS	28099	29088	.	-	0	ID=cds-WP_000093001.1;Parent=gene-C9E97_RS17380;Dbxref=GenBank:WP_000093001.1;Name=WP_000093001.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459096.1;locus_tag=C9E97_RS17380;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_000093001.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	29088	30374	.	-	.	ID=gene-C9E97_RS17385;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=C9E97_RS17385;old_locus_tag=C9E97_17770
NZ_PYKA01000115.1	Protein Homology	CDS	29088	30374	.	-	0	ID=cds-WP_000800482.1;Parent=gene-C9E97_RS17385;Dbxref=GenBank:WP_000800482.1;Name=WP_000800482.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459097.1;locus_tag=C9E97_RS17385;product=peptidylprolyl isomerase SurA;protein_id=WP_000800482.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	30428	32788	.	-	.	ID=gene-C9E97_RS17390;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=C9E97_RS17390;old_locus_tag=C9E97_17775
NZ_PYKA01000115.1	Protein Homology	CDS	30428	32788	.	-	0	ID=cds-WP_135369129.1;Parent=gene-C9E97_RS17390;Dbxref=GenBank:WP_135369129.1;Name=WP_135369129.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459098.1;locus_tag=C9E97_RS17390;product=LPS assembly protein LptD;protein_id=WP_135369129.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	33042	33854	.	+	.	ID=gene-C9E97_RS17395;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=C9E97_RS17395;old_locus_tag=C9E97_17780
NZ_PYKA01000115.1	Protein Homology	CDS	33042	33854	.	+	0	ID=cds-WP_001200595.1;Parent=gene-C9E97_RS17395;Dbxref=GenBank:WP_001200595.1;Name=WP_001200595.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459099.1;locus_tag=C9E97_RS17395;product=co-chaperone DjlA;protein_id=WP_001200595.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	33949	34608	.	-	.	ID=gene-C9E97_RS17400;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=C9E97_RS17400;old_locus_tag=C9E97_17785
NZ_PYKA01000115.1	Protein Homology	CDS	33949	34608	.	-	0	ID=cds-WP_000525198.1;Parent=gene-C9E97_RS17400;Dbxref=GenBank:WP_000525198.1;Name=WP_000525198.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459100.1;locus_tag=C9E97_RS17400;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_000525198.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	34620	37526	.	-	.	ID=gene-C9E97_RS17405;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=C9E97_RS17405;old_locus_tag=C9E97_17790
NZ_PYKA01000115.1	Protein Homology	CDS	34620	37526	.	-	0	ID=cds-WP_001116966.1;Parent=gene-C9E97_RS17405;Dbxref=GenBank:WP_001116966.1;Name=WP_001116966.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=C9E97_RS17405;product=RNA polymerase-associated protein RapA;protein_id=WP_001116966.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	37700	40051	.	-	.	ID=gene-C9E97_RS17410;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=C9E97_RS17410;old_locus_tag=C9E97_17795
NZ_PYKA01000115.1	Protein Homology	CDS	37700	40051	.	-	0	ID=cds-WP_111742468.1;Parent=gene-C9E97_RS17410;Dbxref=GenBank:WP_111742468.1;Name=WP_111742468.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=C9E97_RS17410;product=DNA polymerase II;protein_id=WP_111742468.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	40095	40715	.	-	.	ID=gene-C9E97_RS17415;Name=C9E97_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17415;old_locus_tag=C9E97_17800
NZ_PYKA01000115.1	Protein Homology	CDS	40095	40715	.	-	0	ID=cds-WP_135369130.1;Parent=gene-C9E97_RS17415;Dbxref=GenBank:WP_135369130.1;Name=WP_135369130.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=C9E97_RS17415;product=YdcF family protein;protein_id=WP_135369130.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	41233	41652	.	+	.	ID=gene-C9E97_RS17425;Name=C9E97_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17425;old_locus_tag=C9E97_17810
NZ_PYKA01000115.1	Protein Homology	CDS	41233	41652	.	+	0	ID=cds-WP_001103149.1;Parent=gene-C9E97_RS17425;Dbxref=GenBank:WP_001103149.1;Name=WP_001103149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459105.1;locus_tag=C9E97_RS17425;product=DUF4751 family protein;protein_id=WP_001103149.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	41658	42353	.	-	.	ID=gene-C9E97_RS17430;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=C9E97_RS17430;old_locus_tag=C9E97_17815
NZ_PYKA01000115.1	Protein Homology	CDS	41658	42353	.	-	0	ID=cds-WP_000888684.1;Parent=gene-C9E97_RS17430;Dbxref=GenBank:WP_000888684.1;Name=WP_000888684.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459106.1;locus_tag=C9E97_RS17430;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000888684.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	42494	43996	.	-	.	ID=gene-C9E97_RS17435;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=C9E97_RS17435;old_locus_tag=C9E97_17820
NZ_PYKA01000115.1	Protein Homology	CDS	42494	43996	.	-	0	ID=cds-WP_135369488.1;Parent=gene-C9E97_RS17435;Dbxref=GenBank:WP_135369488.1;Name=WP_135369488.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459107.1;locus_tag=C9E97_RS17435;product=L-arabinose isomerase;protein_id=WP_135369488.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	44007	45716	.	-	.	ID=gene-C9E97_RS17440;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=C9E97_RS17440;old_locus_tag=C9E97_17825
NZ_PYKA01000115.1	Protein Homology	CDS	44007	45716	.	-	0	ID=cds-WP_135369489.1;Parent=gene-C9E97_RS17440;Dbxref=GenBank:WP_135369489.1;Name=WP_135369489.1;Ontology_term=GO:0019568,GO:0005524,GO:0008741;gbkey=CDS;gene=araB;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459108.1;locus_tag=C9E97_RS17440;product=ribulokinase;protein_id=WP_135369489.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	46057	46902	.	+	.	ID=gene-C9E97_RS17445;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=C9E97_RS17445;old_locus_tag=C9E97_17830
NZ_PYKA01000115.1	Protein Homology	CDS	46057	46902	.	+	0	ID=cds-WP_000852387.1;Parent=gene-C9E97_RS17445;Dbxref=GenBank:WP_000852387.1;Name=WP_000852387.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459109.1;locus_tag=C9E97_RS17445;product=arabinose operon transcriptional regulator AraC;protein_id=WP_000852387.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	47021	47788	.	+	.	ID=gene-C9E97_RS17450;Name=C9E97_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17450;old_locus_tag=C9E97_17835
NZ_PYKA01000115.1	Protein Homology	CDS	47021	47788	.	+	0	ID=cds-WP_001148372.1;Parent=gene-C9E97_RS17450;Dbxref=GenBank:WP_001148372.1;Name=WP_001148372.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459110.1;locus_tag=C9E97_RS17450;product=DedA family protein;protein_id=WP_001148372.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	47827	48534	.	-	.	ID=gene-C9E97_RS17455;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=C9E97_RS17455;old_locus_tag=C9E97_17840
NZ_PYKA01000115.1	Protein Homology	CDS	47827	48534	.	-	0	ID=cds-WP_023221144.1;Parent=gene-C9E97_RS17455;Dbxref=GenBank:WP_023221144.1;Name=WP_023221144.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459111.1;locus_tag=C9E97_RS17455;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_023221144.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	48518	50128	.	-	.	ID=gene-C9E97_RS17460;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=C9E97_RS17460;old_locus_tag=C9E97_17845
NZ_PYKA01000115.1	Protein Homology	CDS	48518	50128	.	-	0	ID=cds-WP_135369490.1;Parent=gene-C9E97_RS17460;Dbxref=GenBank:WP_135369490.1;Name=WP_135369490.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459112.1;locus_tag=C9E97_RS17460;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_135369490.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	50104	51087	.	-	.	ID=gene-C9E97_RS17465;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=C9E97_RS17465;old_locus_tag=C9E97_17850
NZ_PYKA01000115.1	Protein Homology	CDS	50104	51087	.	-	0	ID=cds-WP_000915326.1;Parent=gene-C9E97_RS17465;Dbxref=GenBank:WP_000915326.1;Name=WP_000915326.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459113.1;locus_tag=C9E97_RS17465;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_000915326.1;transl_table=11
NZ_PYKA01000115.1	cmsearch	riboswitch	51119	51218	.	-	.	ID=id-NZ_PYKA01000115.1:51119..51218;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PYKA01000115.1	RefSeq	gene	51265	52923	.	-	.	ID=gene-C9E97_RS17470;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=C9E97_RS17470;old_locus_tag=C9E97_17855
NZ_PYKA01000115.1	Protein Homology	CDS	51265	52923	.	-	0	ID=cds-WP_001139028.1;Parent=gene-C9E97_RS17470;Dbxref=GenBank:WP_001139028.1;Name=WP_001139028.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459114.1;locus_tag=C9E97_RS17470;product=HTH-type transcriptional regulator SgrR;protein_id=WP_001139028.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	53016	53138	.	+	.	ID=gene-C9E97_RS17475;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=C9E97_RS17475;old_locus_tag=C9E97_17860
NZ_PYKA01000115.1	Protein Homology	CDS	53016	53138	.	+	0	ID=cds-WP_135369491.1;Parent=gene-C9E97_RS17475;Dbxref=GenBank:WP_135369491.1;Name=WP_135369491.1;Ontology_term=GO:0046325;gbkey=CDS;gene=sgrT;go_process=negative regulation of D-glucose import|0046325||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248755.1;locus_tag=C9E97_RS17475;product=glucose uptake inhibitor SgrT;protein_id=WP_135369491.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	53456	53737	.	+	.	ID=gene-C9E97_RS17480;Name=C9E97_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17480;old_locus_tag=C9E97_17865
NZ_PYKA01000115.1	Protein Homology	CDS	53456	53737	.	+	0	ID=cds-WP_000755258.1;Parent=gene-C9E97_RS17480;Dbxref=GenBank:WP_000755258.1;Name=WP_000755258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264185.1;locus_tag=C9E97_RS17480;product=DUF5339 family protein;protein_id=WP_000755258.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	53791	54396	.	-	.	ID=gene-C9E97_RS17485;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=C9E97_RS17485;old_locus_tag=C9E97_17870
NZ_PYKA01000115.1	Protein Homology	CDS	53791	54396	.	-	0	ID=cds-WP_000818261.1;Parent=gene-C9E97_RS17485;Dbxref=GenBank:WP_000818261.1;Name=WP_000818261.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459115.1;locus_tag=C9E97_RS17485;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000818261.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	54407	55807	.	-	.	ID=gene-C9E97_RS17490;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=C9E97_RS17490;old_locus_tag=C9E97_17875
NZ_PYKA01000115.1	Protein Homology	CDS	54407	55807	.	-	0	ID=cds-WP_001140634.1;Parent=gene-C9E97_RS17490;Dbxref=GenBank:WP_001140634.1;Name=WP_001140634.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459116.1;locus_tag=C9E97_RS17490;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001140634.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	55810	56901	.	-	.	ID=gene-C9E97_RS17495;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=C9E97_RS17495;old_locus_tag=C9E97_17880
NZ_PYKA01000115.1	Protein Homology	CDS	55810	56901	.	-	0	ID=cds-WP_000042336.1;Parent=gene-C9E97_RS17495;Dbxref=GenBank:WP_000042336.1;Name=WP_000042336.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=C9E97_RS17495;product=3-isopropylmalate dehydrogenase;protein_id=WP_000042336.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	56901	58472	.	-	.	ID=gene-C9E97_RS17500;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=C9E97_RS17500;old_locus_tag=C9E97_17885
NZ_PYKA01000115.1	Protein Homology	CDS	56901	58472	.	-	0	ID=cds-WP_023193603.1;Parent=gene-C9E97_RS17500;Dbxref=GenBank:WP_023193603.1;Name=WP_023193603.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=C9E97_RS17500;product=2-isopropylmalate synthase;protein_id=WP_023193603.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	58560	58646	.	-	.	ID=gene-C9E97_RS17505;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=C9E97_RS17505;old_locus_tag=C9E97_17890
NZ_PYKA01000115.1	Protein Homology	CDS	58560	58646	.	-	0	ID=cds-WP_001575587.1;Parent=gene-C9E97_RS17505;Dbxref=GenBank:WP_001575587.1;Name=WP_001575587.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459119.1;locus_tag=C9E97_RS17505;product=leu operon leader peptide;protein_id=WP_001575587.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	59303	60247	.	+	.	ID=gene-C9E97_RS17510;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=C9E97_RS17510;old_locus_tag=C9E97_17895
NZ_PYKA01000115.1	Protein Homology	CDS	59303	60247	.	+	0	ID=cds-WP_001115420.1;Parent=gene-C9E97_RS17510;Dbxref=GenBank:WP_001115420.1;Name=WP_001115420.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459120.1;locus_tag=C9E97_RS17510;product=transcriptional regulator LeuO;protein_id=WP_001115420.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	60569	62293	.	+	.	ID=gene-C9E97_RS17515;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=C9E97_RS17515;old_locus_tag=C9E97_17900
NZ_PYKA01000115.1	Protein Homology	CDS	60569	62293	.	+	0	ID=cds-WP_000425619.1;Parent=gene-C9E97_RS17515;Dbxref=GenBank:WP_000425619.1;Name=WP_000425619.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=C9E97_RS17515;product=acetolactate synthase 3 large subunit;protein_id=WP_000425619.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	62296	62787	.	+	.	ID=gene-C9E97_RS17520;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=C9E97_RS17520;old_locus_tag=C9E97_17905
NZ_PYKA01000115.1	Protein Homology	CDS	62296	62787	.	+	0	ID=cds-WP_001563086.1;Parent=gene-C9E97_RS17520;Dbxref=GenBank:WP_001563086.1;Name=WP_001563086.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=C9E97_RS17520;product=acetolactate synthase small subunit;protein_id=WP_001563086.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	63071	64075	.	+	.	ID=gene-C9E97_RS17525;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=C9E97_RS17525;old_locus_tag=C9E97_17910
NZ_PYKA01000115.1	Protein Homology	CDS	63071	64075	.	+	0	ID=cds-WP_000762406.1;Parent=gene-C9E97_RS17525;Dbxref=GenBank:WP_000762406.1;Name=WP_000762406.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459123.1;locus_tag=C9E97_RS17525;product=catabolite repressor/activator;protein_id=WP_000762406.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	64681	65139	.	+	.	ID=gene-C9E97_RS17530;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=C9E97_RS17530;old_locus_tag=C9E97_17915
NZ_PYKA01000115.1	Protein Homology	CDS	64681	65139	.	+	0	ID=cds-WP_135369127.1;Parent=gene-C9E97_RS17530;Dbxref=GenBank:WP_135369127.1;Name=WP_135369127.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=C9E97_RS17530;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_135369127.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	65141	66082	.	+	.	ID=gene-C9E97_RS17535;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=C9E97_RS17535;old_locus_tag=C9E97_17920
NZ_PYKA01000115.1	Protein Homology	CDS	65141	66082	.	+	0	ID=cds-WP_000970444.1;Parent=gene-C9E97_RS17535;Dbxref=GenBank:WP_000970444.1;Name=WP_000970444.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=C9E97_RS17535;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000970444.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	66079	66444	.	+	.	ID=gene-C9E97_RS17540;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=C9E97_RS17540;old_locus_tag=C9E97_17925
NZ_PYKA01000115.1	Protein Homology	CDS	66079	66444	.	+	0	ID=cds-WP_000625651.1;Parent=gene-C9E97_RS17540;Dbxref=GenBank:WP_000625651.1;Name=WP_000625651.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=C9E97_RS17540;product=cell division protein FtsL;protein_id=WP_000625651.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	66460	68226	.	+	.	ID=gene-C9E97_RS17545;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=C9E97_RS17545;old_locus_tag=C9E97_17930
NZ_PYKA01000115.1	Protein Homology	CDS	66460	68226	.	+	0	ID=cds-WP_000642235.1;Parent=gene-C9E97_RS17545;Dbxref=GenBank:WP_000642235.1;Name=WP_000642235.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=C9E97_RS17545;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000642235.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	68213	69700	.	+	.	ID=gene-C9E97_RS17550;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=C9E97_RS17550;old_locus_tag=C9E97_17935
NZ_PYKA01000115.1	Protein Homology	CDS	68213	69700	.	+	0	ID=cds-WP_080214024.1;Parent=gene-C9E97_RS17550;Dbxref=GenBank:WP_080214024.1;Name=WP_080214024.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459128.1;locus_tag=C9E97_RS17550;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_080214024.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	69697	71055	.	+	.	ID=gene-C9E97_RS17555;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=C9E97_RS17555;old_locus_tag=C9E97_17940
NZ_PYKA01000115.1	Protein Homology	CDS	69697	71055	.	+	0	ID=cds-WP_000626637.1;Parent=gene-C9E97_RS17555;Dbxref=GenBank:WP_000626637.1;Name=WP_000626637.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459129.1;locus_tag=C9E97_RS17555;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_000626637.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	71049	72131	.	+	.	ID=gene-C9E97_RS17560;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=C9E97_RS17560;old_locus_tag=C9E97_17945
NZ_PYKA01000115.1	Protein Homology	CDS	71049	72131	.	+	0	ID=cds-WP_000964138.1;Parent=gene-C9E97_RS17560;Dbxref=GenBank:WP_000964138.1;Name=WP_000964138.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=C9E97_RS17560;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000964138.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	72134	73450	.	+	.	ID=gene-C9E97_RS17565;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=C9E97_RS17565;old_locus_tag=C9E97_17950
NZ_PYKA01000115.1	Protein Homology	CDS	72134	73450	.	+	0	ID=cds-WP_000796443.1;Parent=gene-C9E97_RS17565;Dbxref=GenBank:WP_000796443.1;Name=WP_000796443.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=C9E97_RS17565;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_000796443.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	73450	74694	.	+	.	ID=gene-C9E97_RS17570;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=C9E97_RS17570;old_locus_tag=C9E97_17955
NZ_PYKA01000115.1	Protein Homology	CDS	73450	74694	.	+	0	ID=cds-WP_001239803.1;Parent=gene-C9E97_RS17570;Dbxref=GenBank:WP_001239803.1;Name=WP_001239803.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459132.1;locus_tag=C9E97_RS17570;product=cell division protein FtsW;protein_id=WP_001239803.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	74691	75758	.	+	.	ID=gene-C9E97_RS17575;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=C9E97_RS17575;old_locus_tag=C9E97_17960
NZ_PYKA01000115.1	Protein Homology	CDS	74691	75758	.	+	0	ID=cds-WP_135369126.1;Parent=gene-C9E97_RS17575;Dbxref=GenBank:WP_135369126.1;Name=WP_135369126.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=C9E97_RS17575;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_135369126.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	75877	77352	.	+	.	ID=gene-C9E97_RS17580;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=C9E97_RS17580;old_locus_tag=C9E97_17965
NZ_PYKA01000115.1	Protein Homology	CDS	75877	77352	.	+	0	ID=cds-WP_001096072.1;Parent=gene-C9E97_RS17580;Dbxref=GenBank:WP_001096072.1;Name=WP_001096072.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459134.1;locus_tag=C9E97_RS17580;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_001096072.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	77345	78265	.	+	.	ID=gene-C9E97_RS17585;Name=C9E97_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17585;old_locus_tag=C9E97_17970
NZ_PYKA01000115.1	Protein Homology	CDS	77345	78265	.	+	0	ID=cds-WP_000763906.1;Parent=gene-C9E97_RS17585;Dbxref=GenBank:WP_000763906.1;Name=WP_000763906.1;Ontology_term=GO:0009252,GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459135.1;locus_tag=C9E97_RS17585;product=D-alanine--D-alanine ligase;protein_id=WP_000763906.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	78267	79097	.	+	.	ID=gene-C9E97_RS17590;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=C9E97_RS17590;old_locus_tag=C9E97_17975
NZ_PYKA01000115.1	Protein Homology	CDS	78267	79097	.	+	0	ID=cds-WP_000075728.1;Parent=gene-C9E97_RS17590;Dbxref=GenBank:WP_000075728.1;Name=WP_000075728.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459136.1;locus_tag=C9E97_RS17590;product=cell division protein FtsQ;protein_id=WP_000075728.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	79094	80356	.	+	.	ID=gene-C9E97_RS17595;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=C9E97_RS17595;old_locus_tag=C9E97_17980
NZ_PYKA01000115.1	Protein Homology	CDS	79094	80356	.	+	0	ID=cds-WP_000588463.1;Parent=gene-C9E97_RS17595;Dbxref=GenBank:WP_000588463.1;Name=WP_000588463.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459137.1;locus_tag=C9E97_RS17595;product=cell division protein FtsA;protein_id=WP_000588463.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	80417	81568	.	+	.	ID=gene-C9E97_RS17600;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=C9E97_RS17600;old_locus_tag=C9E97_17985
NZ_PYKA01000115.1	Protein Homology	CDS	80417	81568	.	+	0	ID=cds-WP_000462785.1;Parent=gene-C9E97_RS17600;Dbxref=GenBank:WP_000462785.1;Name=WP_000462785.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=C9E97_RS17600;product=cell division protein FtsZ;protein_id=WP_000462785.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	81669	82586	.	+	.	ID=gene-C9E97_RS17605;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=C9E97_RS17605;old_locus_tag=C9E97_17990
NZ_PYKA01000115.1	Protein Homology	CDS	81669	82586	.	+	0	ID=cds-WP_000595487.1;Parent=gene-C9E97_RS17605;Dbxref=GenBank:WP_000595487.1;Name=WP_000595487.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459139.1;locus_tag=C9E97_RS17605;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_000595487.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	82864	83361	.	+	.	ID=gene-C9E97_RS17610;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=C9E97_RS17610;old_locus_tag=C9E97_17995
NZ_PYKA01000115.1	Protein Homology	CDS	82864	83361	.	+	0	ID=cds-WP_000014336.1;Parent=gene-C9E97_RS17610;Dbxref=GenBank:WP_000014336.1;Name=WP_000014336.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308128.2;locus_tag=C9E97_RS17610;product=secA translation cis-regulator SecM;protein_id=WP_000014336.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	83423	86128	.	+	.	ID=gene-C9E97_RS17615;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=C9E97_RS17615;old_locus_tag=C9E97_18000
NZ_PYKA01000115.1	Protein Homology	CDS	83423	86128	.	+	0	ID=cds-WP_000905756.1;Parent=gene-C9E97_RS17615;Dbxref=GenBank:WP_000905756.1;Name=WP_000905756.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459141.1;locus_tag=C9E97_RS17615;product=preprotein translocase subunit SecA;protein_id=WP_000905756.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	86280	86675	.	+	.	ID=gene-C9E97_RS17620;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=C9E97_RS17620;old_locus_tag=C9E97_18005
NZ_PYKA01000115.1	Protein Homology	CDS	86280	86675	.	+	0	ID=cds-WP_000736058.1;Parent=gene-C9E97_RS17620;Dbxref=GenBank:WP_000736058.1;Name=WP_000736058.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000736055.1;locus_tag=C9E97_RS17620;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_000736058.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	86709	87698	.	-	.	ID=gene-C9E97_RS17625;Name=C9E97_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17625;old_locus_tag=C9E97_18010
NZ_PYKA01000115.1	Protein Homology	CDS	86709	87698	.	-	0	ID=cds-WP_047607050.1;Parent=gene-C9E97_RS17625;Dbxref=GenBank:WP_047607050.1;Name=WP_047607050.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200034.1;locus_tag=C9E97_RS17625;product=aldo/keto reductase;protein_id=WP_047607050.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	87784	88725	.	+	.	ID=gene-C9E97_RS17630;Name=C9E97_RS17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17630;old_locus_tag=C9E97_18015
NZ_PYKA01000115.1	Protein Homology	CDS	87784	88725	.	+	0	ID=cds-WP_135369125.1;Parent=gene-C9E97_RS17630;Dbxref=GenBank:WP_135369125.1;Name=WP_135369125.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697068.1;locus_tag=C9E97_RS17630;product=LysR family transcriptional regulator;protein_id=WP_135369125.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	88722	88913	.	-	.	ID=gene-C9E97_RS17635;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=C9E97_RS17635;old_locus_tag=C9E97_18020
NZ_PYKA01000115.1	Protein Homology	CDS	88722	88913	.	-	0	ID=cds-WP_001286419.1;Parent=gene-C9E97_RS17635;Dbxref=GenBank:WP_001286419.1;Name=WP_001286419.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459143.1;locus_tag=C9E97_RS17635;product=DNA gyrase inhibitor YacG;protein_id=WP_001286419.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	88923	89666	.	-	.	ID=gene-C9E97_RS17640;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=C9E97_RS17640;old_locus_tag=C9E97_18025
NZ_PYKA01000115.1	Protein Homology	CDS	88923	89666	.	-	0	ID=cds-WP_000557441.1;Parent=gene-C9E97_RS17640;Dbxref=GenBank:WP_000557441.1;Name=WP_000557441.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459144.1;locus_tag=C9E97_RS17640;product=cell division protein ZapD;protein_id=WP_000557441.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	89666	90286	.	-	.	ID=gene-C9E97_RS17645;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=C9E97_RS17645;old_locus_tag=C9E97_18030
NZ_PYKA01000115.1	Protein Homology	CDS	89666	90286	.	-	0	ID=cds-WP_001270913.1;Parent=gene-C9E97_RS17645;Dbxref=GenBank:WP_001270913.1;Name=WP_001270913.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459145.1;locus_tag=C9E97_RS17645;product=dephospho-CoA kinase;protein_id=WP_001270913.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	90512	91555	.	+	.	ID=gene-C9E97_RS17650;Name=C9E97_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17650;old_locus_tag=C9E97_18035
NZ_PYKA01000115.1	Protein Homology	CDS	90512	91555	.	+	0	ID=cds-WP_001217365.1;Parent=gene-C9E97_RS17650;Dbxref=GenBank:WP_001217365.1;Name=WP_001217365.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=C9E97_RS17650;product=GMP reductase;protein_id=WP_001217365.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	91586	92788	.	-	.	ID=gene-C9E97_RS17655;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=C9E97_RS17655;old_locus_tag=C9E97_18040
NZ_PYKA01000115.1	Protein Homology	CDS	91586	92788	.	-	0	ID=cds-WP_135369124.1;Parent=gene-C9E97_RS17655;Dbxref=GenBank:WP_135369124.1;Name=WP_135369124.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459147.1;locus_tag=C9E97_RS17655;product=protein transport protein HofC;protein_id=WP_135369124.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	92778	94163	.	-	.	ID=gene-C9E97_RS17660;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=C9E97_RS17660;old_locus_tag=C9E97_18045
NZ_PYKA01000115.1	Protein Homology	CDS	92778	94163	.	-	0	ID=cds-WP_135369123.1;Parent=gene-C9E97_RS17660;Dbxref=GenBank:WP_135369123.1;Name=WP_135369123.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459148.1;locus_tag=C9E97_RS17660;product=type II secretion system protein GspE;protein_id=WP_135369123.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	94173	94610	.	-	.	ID=gene-C9E97_RS17665;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=C9E97_RS17665;old_locus_tag=C9E97_18050
NZ_PYKA01000115.1	Protein Homology	CDS	94173	94610	.	-	0	ID=cds-WP_000414989.1;Parent=gene-C9E97_RS17665;Dbxref=GenBank:WP_000414989.1;Name=WP_000414989.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459149.1;locus_tag=C9E97_RS17665;product=prepilin peptidase-dependent pilin;protein_id=WP_000414989.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	94832	95725	.	-	.	ID=gene-C9E97_RS17675;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=C9E97_RS17675;old_locus_tag=C9E97_18060
NZ_PYKA01000115.1	Protein Homology	CDS	94832	95725	.	-	0	ID=cds-WP_001135135.1;Parent=gene-C9E97_RS17675;Dbxref=GenBank:WP_001135135.1;Name=WP_001135135.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459150.1;locus_tag=C9E97_RS17675;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_001135135.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	95813	96376	.	+	.	ID=gene-C9E97_RS17680;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=C9E97_RS17680;old_locus_tag=C9E97_18065
NZ_PYKA01000115.1	Protein Homology	CDS	95813	96376	.	+	0	ID=cds-WP_000936326.1;Parent=gene-C9E97_RS17680;Dbxref=GenBank:WP_000936326.1;Name=WP_000936326.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459151.1;locus_tag=C9E97_RS17680;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000936326.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	96373	97227	.	+	.	ID=gene-C9E97_RS17685;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=C9E97_RS17685;old_locus_tag=C9E97_18070
NZ_PYKA01000115.1	Protein Homology	CDS	96373	97227	.	+	0	ID=cds-WP_000172039.1;Parent=gene-C9E97_RS17685;Dbxref=GenBank:WP_000172039.1;Name=WP_000172039.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459152.1;locus_tag=C9E97_RS17685;product=beta-lactamase regulator AmpE;protein_id=WP_000172039.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	97319	98269	.	-	.	ID=gene-C9E97_RS17690;Name=C9E97_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17690;old_locus_tag=C9E97_18075
NZ_PYKA01000115.1	Protein Homology	CDS	97319	98269	.	-	0	ID=cds-WP_135369122.1;Parent=gene-C9E97_RS17690;Dbxref=GenBank:WP_135369122.1;Name=WP_135369122.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459153.1;locus_tag=C9E97_RS17690;product=glycoside hydrolase family 43 protein;protein_id=WP_135369122.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	pseudogene	98269	99675	.	-	.	ID=gene-C9E97_RS17695;Name=C9E97_RS17695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS17695;old_locus_tag=C9E97_18080;pseudo=true
NZ_PYKA01000115.1	Protein Homology	CDS	98269	99675	.	-	0	ID=cds-C9E97_RS17695;Parent=gene-C9E97_RS17695;Note=internal stop;Ontology_term=GO:0006812,GO:0008643,GO:0015486,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glycoside-pentoside-hexuronide:cation symporter activity|0015486||IEA;go_process=monoatomic cation transport|0006812||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459154.1;locus_tag=C9E97_RS17695;product=glycoside-pentoside-hexuronide (GPH):cation symporter;pseudo=true;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	99839	101212	.	-	.	ID=gene-C9E97_RS17700;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=C9E97_RS17700;old_locus_tag=C9E97_18085
NZ_PYKA01000115.1	Protein Homology	CDS	99839	101212	.	-	0	ID=cds-WP_000969487.1;Parent=gene-C9E97_RS17700;Dbxref=GenBank:WP_000969487.1;Name=WP_000969487.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459155.1;locus_tag=C9E97_RS17700;product=aromatic amino acid transporter AroP;protein_id=WP_000969487.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	101775	102539	.	+	.	ID=gene-C9E97_RS17705;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=C9E97_RS17705;old_locus_tag=C9E97_18090
NZ_PYKA01000115.1	Protein Homology	CDS	101775	102539	.	+	0	ID=cds-WP_000331771.1;Parent=gene-C9E97_RS17705;Dbxref=GenBank:WP_000331771.1;Name=WP_000331771.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459156.1;locus_tag=C9E97_RS17705;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_000331771.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	102846	105509	.	+	.	ID=gene-C9E97_RS17710;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=C9E97_RS17710;old_locus_tag=C9E97_18100
NZ_PYKA01000115.1	Protein Homology	CDS	102846	105509	.	+	0	ID=cds-WP_000003852.1;Parent=gene-C9E97_RS17710;Dbxref=GenBank:WP_000003852.1;Name=WP_000003852.1;Ontology_term=GO:0006086,GO:0004738,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=C9E97_RS17710;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_000003852.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	105524	107416	.	+	.	ID=gene-C9E97_RS17715;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=C9E97_RS17715;old_locus_tag=C9E97_18105
NZ_PYKA01000115.1	Protein Homology	CDS	105524	107416	.	+	0	ID=cds-WP_023239707.1;Parent=gene-C9E97_RS17715;Dbxref=GenBank:WP_023239707.1;Name=WP_023239707.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459158.2;locus_tag=C9E97_RS17715;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_023239707.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	107618	109042	.	+	.	ID=gene-C9E97_RS17720;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=C9E97_RS17720;old_locus_tag=C9E97_18110
NZ_PYKA01000115.1	Protein Homology	CDS	107618	109042	.	+	0	ID=cds-WP_001537804.1;Parent=gene-C9E97_RS17720;Dbxref=GenBank:WP_001537804.1;Name=WP_001537804.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=C9E97_RS17720;product=dihydrolipoyl dehydrogenase;protein_id=WP_001537804.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	109331	109615	.	+	.	ID=gene-C9E97_RS17725;Name=C9E97_RS17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17725;old_locus_tag=C9E97_18115
NZ_PYKA01000115.1	Protein Homology	CDS	109331	109615	.	+	0	ID=cds-WP_135369121.1;Parent=gene-C9E97_RS17725;Dbxref=GenBank:WP_135369121.1;Name=WP_135369121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459160.1;locus_tag=C9E97_RS17725;product=hypothetical protein;protein_id=WP_135369121.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	109653	110444	.	-	.	ID=gene-C9E97_RS17730;Name=C9E97_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17730;old_locus_tag=C9E97_18120
NZ_PYKA01000115.1	Protein Homology	CDS	109653	110444	.	-	0	ID=cds-WP_000757452.1;Parent=gene-C9E97_RS17730;Dbxref=GenBank:WP_000757452.1;Name=WP_000757452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459161.1;locus_tag=C9E97_RS17730;product=DUF2950 family protein;protein_id=WP_000757452.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	110457	112082	.	-	.	ID=gene-C9E97_RS17735;Name=C9E97_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17735;old_locus_tag=C9E97_18125
NZ_PYKA01000115.1	Protein Homology	CDS	110457	112082	.	-	0	ID=cds-WP_064043215.1;Parent=gene-C9E97_RS17735;Dbxref=GenBank:WP_064043215.1;Name=WP_064043215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459162.2;locus_tag=C9E97_RS17735;product=DUF3300 domain-containing protein;protein_id=WP_064043215.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	112471	115068	.	+	.	ID=gene-C9E97_RS17740;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=C9E97_RS17740;old_locus_tag=C9E97_18135
NZ_PYKA01000115.1	Protein Homology	CDS	112471	115068	.	+	0	ID=cds-WP_135369120.1;Parent=gene-C9E97_RS17740;Dbxref=GenBank:WP_135369120.1;Name=WP_135369120.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080489.1;locus_tag=C9E97_RS17740;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_135369120.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	115108	115572	.	-	.	ID=gene-C9E97_RS17745;Name=C9E97_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17745;old_locus_tag=C9E97_18140
NZ_PYKA01000115.1	Protein Homology	CDS	115108	115572	.	-	0	ID=cds-WP_000110437.1;Parent=gene-C9E97_RS17745;Dbxref=GenBank:WP_000110437.1;Name=WP_000110437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110434.1;locus_tag=C9E97_RS17745;product=membrane protein;protein_id=WP_000110437.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	115990	116313	.	-	.	ID=gene-C9E97_RS17750;Name=C9E97_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17750;old_locus_tag=C9E97_18145
NZ_PYKA01000115.1	Protein Homology	CDS	115990	116313	.	-	0	ID=cds-WP_001101536.1;Parent=gene-C9E97_RS17750;Dbxref=GenBank:WP_001101536.1;Name=WP_001101536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101536.1;locus_tag=C9E97_RS17750;product=low molecular weight protein tyrosine phosphatase family protein;protein_id=WP_001101536.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	116584	116946	.	+	.	ID=gene-C9E97_RS17755;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=C9E97_RS17755;old_locus_tag=C9E97_18150
NZ_PYKA01000115.1	Protein Homology	CDS	116584	116946	.	+	0	ID=cds-WP_000384308.1;Parent=gene-C9E97_RS17755;Dbxref=GenBank:WP_000384308.1;Name=WP_000384308.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459165.1;locus_tag=C9E97_RS17755;product=protein YacL;protein_id=WP_000384308.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	117181	118134	.	+	.	ID=gene-C9E97_RS17760;Name=C9E97_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17760;old_locus_tag=C9E97_18155
NZ_PYKA01000115.1	Protein Homology	CDS	117181	118134	.	+	0	ID=cds-WP_001022089.1;Parent=gene-C9E97_RS17760;Dbxref=GenBank:WP_001022089.1;Name=WP_001022089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459166.1;locus_tag=C9E97_RS17760;product=2-keto-3-deoxygluconate permease 1;protein_id=WP_001022089.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	118131	119402	.	+	.	ID=gene-C9E97_RS17765;Name=dtnK;gbkey=Gene;gene=dtnK;gene_biotype=protein_coding;locus_tag=C9E97_RS17765;old_locus_tag=C9E97_18160
NZ_PYKA01000115.1	Protein Homology	CDS	118131	119402	.	+	0	ID=cds-WP_135369119.1;Parent=gene-C9E97_RS17765;Dbxref=GenBank:WP_135369119.1;Name=WP_135369119.1;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;gene=dtnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459167.1;locus_tag=C9E97_RS17765;product=D-threonate kinase;protein_id=WP_135369119.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	119392	120375	.	+	.	ID=gene-C9E97_RS17770;Name=C9E97_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17770;old_locus_tag=C9E97_18165
NZ_PYKA01000115.1	Protein Homology	CDS	119392	120375	.	+	0	ID=cds-WP_000448753.1;Parent=gene-C9E97_RS17770;Dbxref=GenBank:WP_000448753.1;Name=WP_000448753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459168.1;locus_tag=C9E97_RS17770;product=D-threonate 4-phosphate dehydrogenase;protein_id=WP_000448753.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	120385	121152	.	+	.	ID=gene-C9E97_RS17775;Name=C9E97_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17775;old_locus_tag=C9E97_18170
NZ_PYKA01000115.1	Protein Homology	CDS	120385	121152	.	+	0	ID=cds-WP_000678254.1;Parent=gene-C9E97_RS17775;Dbxref=GenBank:WP_000678254.1;Name=WP_000678254.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459169.1;locus_tag=C9E97_RS17775;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000678254.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	121182	121976	.	-	.	ID=gene-C9E97_RS17780;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=C9E97_RS17780;old_locus_tag=C9E97_18175
NZ_PYKA01000115.1	Protein Homology	CDS	121182	121976	.	-	0	ID=cds-WP_000734293.1;Parent=gene-C9E97_RS17780;Dbxref=GenBank:WP_000734293.1;Name=WP_000734293.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459170.1;locus_tag=C9E97_RS17780;product=adenosylmethionine decarboxylase;protein_id=WP_000734293.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	121997	122857	.	-	.	ID=gene-C9E97_RS17785;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=C9E97_RS17785;old_locus_tag=C9E97_18180
NZ_PYKA01000115.1	Protein Homology	CDS	121997	122857	.	-	0	ID=cds-WP_023209229.1;Parent=gene-C9E97_RS17785;Dbxref=GenBank:WP_023209229.1;Name=WP_023209229.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459171.1;locus_tag=C9E97_RS17785;product=polyamine aminopropyltransferase;protein_id=WP_023209229.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	122964	123311	.	-	.	ID=gene-C9E97_RS17790;Name=C9E97_RS17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17790;old_locus_tag=C9E97_18185
NZ_PYKA01000115.1	Protein Homology	CDS	122964	123311	.	-	0	ID=cds-WP_000846613.1;Parent=gene-C9E97_RS17790;Dbxref=GenBank:WP_000846613.1;Name=WP_000846613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459172.1;locus_tag=C9E97_RS17790;product=YacC family pilotin-like protein;protein_id=WP_000846613.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	123513	125123	.	+	.	ID=gene-C9E97_RS17795;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=C9E97_RS17795;old_locus_tag=C9E97_18190
NZ_PYKA01000115.1	Protein Homology	CDS	123513	125123	.	+	0	ID=cds-WP_000946046.1;Parent=gene-C9E97_RS17795;Dbxref=GenBank:WP_000946046.1;Name=WP_000946046.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459173.1;locus_tag=C9E97_RS17795;product=multicopper oxidase CueO;protein_id=WP_000946046.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	125215	127605	.	-	.	ID=gene-C9E97_RS17800;Name=C9E97_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17800;old_locus_tag=C9E97_18195
NZ_PYKA01000115.1	Protein Homology	CDS	125215	127605	.	-	0	ID=cds-WP_000829727.1;Parent=gene-C9E97_RS17800;Dbxref=GenBank:WP_000829727.1;Name=WP_000829727.1;Ontology_term=GO:0016614,GO:0048038,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459174.1;locus_tag=C9E97_RS17800;product=glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase;protein_id=WP_000829727.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	127811	128347	.	+	.	ID=gene-C9E97_RS17805;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=C9E97_RS17805;old_locus_tag=C9E97_18200
NZ_PYKA01000115.1	Protein Homology	CDS	127811	128347	.	+	0	ID=cds-WP_000683343.1;Parent=gene-C9E97_RS17805;Dbxref=GenBank:WP_000683343.1;Name=WP_000683343.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=C9E97_RS17805;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683343.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	128405	129067	.	-	.	ID=gene-C9E97_RS17810;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=C9E97_RS17810;old_locus_tag=C9E97_18205
NZ_PYKA01000115.1	Protein Homology	CDS	128405	129067	.	-	0	ID=cds-WP_000651591.1;Parent=gene-C9E97_RS17810;Dbxref=GenBank:WP_000651591.1;Name=WP_000651591.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459176.1;locus_tag=C9E97_RS17810;product=carbonate dehydratase;protein_id=WP_000651591.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	129176	130102	.	+	.	ID=gene-C9E97_RS17815;Name=C9E97_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17815;old_locus_tag=C9E97_18210
NZ_PYKA01000115.1	Protein Homology	CDS	129176	130102	.	+	0	ID=cds-WP_000150619.1;Parent=gene-C9E97_RS17815;Dbxref=GenBank:WP_000150619.1;Name=WP_000150619.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459177.1;locus_tag=C9E97_RS17815;product=ABC transporter ATP-binding protein;protein_id=WP_000150619.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	130099	130869	.	+	.	ID=gene-C9E97_RS17820;Name=C9E97_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17820;old_locus_tag=C9E97_18215
NZ_PYKA01000115.1	Protein Homology	CDS	130099	130869	.	+	0	ID=cds-WP_000983416.1;Parent=gene-C9E97_RS17820;Dbxref=GenBank:WP_000983416.1;Name=WP_000983416.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=C9E97_RS17820;product=ABC transporter permease;protein_id=WP_000983416.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	130989	132065	.	-	.	ID=gene-C9E97_RS17825;Name=C9E97_RS17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17825;old_locus_tag=C9E97_18220
NZ_PYKA01000115.1	Protein Homology	CDS	130989	132065	.	-	0	ID=cds-WP_135369118.1;Parent=gene-C9E97_RS17825;Dbxref=GenBank:WP_135369118.1;Name=WP_135369118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459179.1;locus_tag=C9E97_RS17825;product=fimbrial protein;protein_id=WP_135369118.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	132074	134620	.	-	.	ID=gene-C9E97_RS17830;Name=C9E97_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17830;old_locus_tag=C9E97_18225
NZ_PYKA01000115.1	Protein Homology	CDS	132074	134620	.	-	0	ID=cds-WP_135369117.1;Parent=gene-C9E97_RS17830;Dbxref=GenBank:WP_135369117.1;Name=WP_135369117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459180.1;locus_tag=C9E97_RS17830;product=fimbrial outer membrane usher protein;protein_id=WP_135369117.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	134647	135330	.	-	.	ID=gene-C9E97_RS17835;Name=stiB;gbkey=Gene;gene=stiB;gene_biotype=protein_coding;locus_tag=C9E97_RS17835;old_locus_tag=C9E97_18230
NZ_PYKA01000115.1	Protein Homology	CDS	134647	135330	.	-	0	ID=cds-WP_001086408.1;Parent=gene-C9E97_RS17835;Dbxref=GenBank:WP_001086408.1;Name=WP_001086408.1;gbkey=CDS;gene=stiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459181.1;locus_tag=C9E97_RS17835;product=fimbrial biogenesis chaperone StiB;protein_id=WP_001086408.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	135378	135917	.	-	.	ID=gene-C9E97_RS17840;Name=stiA;gbkey=Gene;gene=stiA;gene_biotype=protein_coding;locus_tag=C9E97_RS17840;old_locus_tag=C9E97_18235
NZ_PYKA01000115.1	Protein Homology	CDS	135378	135917	.	-	0	ID=cds-WP_001821456.1;Parent=gene-C9E97_RS17840;Dbxref=GenBank:WP_001821456.1;Name=WP_001821456.1;gbkey=CDS;gene=stiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459182.1;locus_tag=C9E97_RS17840;product=Sti fimbria major subunit StiA;protein_id=WP_001821456.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	136287	136727	.	+	.	ID=gene-C9E97_RS17845;Name=C9E97_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17845;old_locus_tag=C9E97_18240
NZ_PYKA01000115.1	Protein Homology	CDS	136287	136727	.	+	0	ID=cds-WP_000901958.1;Parent=gene-C9E97_RS17845;Dbxref=GenBank:WP_000901958.1;Name=WP_000901958.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459183.1;locus_tag=C9E97_RS17845;product=PTS sugar transporter subunit IIA;protein_id=WP_000901958.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	136789	138018	.	+	.	ID=gene-C9E97_RS17850;Name=C9E97_RS17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17850;old_locus_tag=C9E97_18245
NZ_PYKA01000115.1	Protein Homology	CDS	136789	138018	.	+	0	ID=cds-WP_135369506.1;Parent=gene-C9E97_RS17850;Dbxref=GenBank:WP_135369506.1;Name=WP_135369506.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459184.1;locus_tag=C9E97_RS17850;product=polysaccharide deacetylase family protein;protein_id=WP_135369506.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	138025	138405	.	-	.	ID=gene-C9E97_RS17855;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=C9E97_RS17855;old_locus_tag=C9E97_18250
NZ_PYKA01000115.1	Protein Homology	CDS	138025	138405	.	-	0	ID=cds-WP_000621526.1;Parent=gene-C9E97_RS17855;Dbxref=GenBank:WP_000621526.1;Name=WP_000621526.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=C9E97_RS17855;product=aspartate 1-decarboxylase;protein_id=WP_000621526.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	138500	139354	.	-	.	ID=gene-C9E97_RS17860;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=C9E97_RS17860;old_locus_tag=C9E97_18255
NZ_PYKA01000115.1	Protein Homology	CDS	138500	139354	.	-	0	ID=cds-WP_061424198.1;Parent=gene-C9E97_RS17860;Dbxref=GenBank:WP_061424198.1;Name=WP_061424198.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459186.1;locus_tag=C9E97_RS17860;product=pantoate--beta-alanine ligase;protein_id=WP_061424198.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	139480	140271	.	-	.	ID=gene-C9E97_RS17865;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=C9E97_RS17865;old_locus_tag=C9E97_18260
NZ_PYKA01000115.1	Protein Homology	CDS	139480	140271	.	-	0	ID=cds-WP_000805489.1;Parent=gene-C9E97_RS17865;Dbxref=GenBank:WP_000805489.1;Name=WP_000805489.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=C9E97_RS17865;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_000805489.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	140392	140871	.	-	.	ID=gene-C9E97_RS17870;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=C9E97_RS17870;old_locus_tag=C9E97_18265
NZ_PYKA01000115.1	Protein Homology	CDS	140392	140871	.	-	0	ID=cds-WP_000150777.1;Parent=gene-C9E97_RS17870;Dbxref=GenBank:WP_000150777.1;Name=WP_000150777.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459188.1;locus_tag=C9E97_RS17870;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_000150777.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	140868	142265	.	-	.	ID=gene-C9E97_RS17875;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=C9E97_RS17875;old_locus_tag=C9E97_18270
NZ_PYKA01000115.1	Protein Homology	CDS	140868	142265	.	-	0	ID=cds-WP_204367155.1;Parent=gene-C9E97_RS17875;Dbxref=GenBank:WP_204367155.1;Name=WP_204367155.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=C9E97_RS17875;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_204367155.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	142427	143323	.	-	.	ID=gene-C9E97_RS17880;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=C9E97_RS17880;old_locus_tag=C9E97_18275
NZ_PYKA01000115.1	Protein Homology	CDS	142427	143323	.	-	0	ID=cds-WP_135369507.1;Parent=gene-C9E97_RS17880;Dbxref=GenBank:WP_135369507.1;Name=WP_135369507.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549989.1;locus_tag=C9E97_RS17880;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_135369507.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	143392	143847	.	-	.	ID=gene-C9E97_RS17885;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=C9E97_RS17885;old_locus_tag=C9E97_18280
NZ_PYKA01000115.1	Protein Homology	CDS	143392	143847	.	-	0	ID=cds-WP_001155232.1;Parent=gene-C9E97_RS17885;Dbxref=GenBank:WP_001155232.1;Name=WP_001155232.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=C9E97_RS17885;product=RNA polymerase-binding protein DksA;protein_id=WP_001155232.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	144024	144728	.	-	.	ID=gene-C9E97_RS17890;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=C9E97_RS17890;old_locus_tag=C9E97_18285
NZ_PYKA01000115.1	Protein Homology	CDS	144024	144728	.	-	0	ID=cds-WP_000899408.1;Parent=gene-C9E97_RS17890;Dbxref=GenBank:WP_000899408.1;Name=WP_000899408.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459192.1;locus_tag=C9E97_RS17890;product=DNA/RNA nuclease SfsA;protein_id=WP_000899408.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	144745	145275	.	-	.	ID=gene-C9E97_RS17895;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=C9E97_RS17895;old_locus_tag=C9E97_18290
NZ_PYKA01000115.1	Protein Homology	CDS	144745	145275	.	-	0	ID=cds-WP_001294178.1;Parent=gene-C9E97_RS17895;Dbxref=GenBank:WP_001294178.1;Name=WP_001294178.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459193.1;locus_tag=C9E97_RS17895;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_001294178.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	145348	147777	.	+	.	ID=gene-C9E97_RS17900;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=C9E97_RS17900;old_locus_tag=C9E97_18295
NZ_PYKA01000115.1	Protein Homology	CDS	145348	147777	.	+	0	ID=cds-WP_167850429.1;Parent=gene-C9E97_RS17900;Dbxref=GenBank:WP_167850429.1;Name=WP_167850429.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414690.4;locus_tag=C9E97_RS17900;product=ATP-dependent helicase HrpB;protein_id=WP_167850429.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	147918	150440	.	+	.	ID=gene-C9E97_RS17905;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=C9E97_RS17905;old_locus_tag=C9E97_18300
NZ_PYKA01000115.1	Protein Homology	CDS	147918	150440	.	+	0	ID=cds-WP_000918127.1;Parent=gene-C9E97_RS17905;Dbxref=GenBank:WP_000918127.1;Name=WP_000918127.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459195.1;locus_tag=C9E97_RS17905;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_000918127.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	150733	152976	.	+	.	ID=gene-C9E97_RS17910;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=C9E97_RS17910;old_locus_tag=C9E97_18305
NZ_PYKA01000115.1	Protein Homology	CDS	150733	152976	.	+	0	ID=cds-WP_010835134.1;Parent=gene-C9E97_RS17910;Dbxref=GenBank:WP_010835134.1;Name=WP_010835134.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308181.1;locus_tag=C9E97_RS17910;product=ferrichrome porin FhuA;protein_id=WP_010835134.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	153025	153822	.	+	.	ID=gene-C9E97_RS17915;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=C9E97_RS17915;old_locus_tag=C9E97_18310
NZ_PYKA01000115.1	Protein Homology	CDS	153025	153822	.	+	0	ID=cds-WP_001157197.1;Parent=gene-C9E97_RS17915;Dbxref=GenBank:WP_001157197.1;Name=WP_001157197.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459197.1;locus_tag=C9E97_RS17915;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_001157197.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	153822	154712	.	+	.	ID=gene-C9E97_RS17920;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=C9E97_RS17920;old_locus_tag=C9E97_18315
NZ_PYKA01000115.1	Protein Homology	CDS	153822	154712	.	+	0	ID=cds-WP_135369509.1;Parent=gene-C9E97_RS17920;Dbxref=GenBank:WP_135369509.1;Name=WP_135369509.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459198.1;locus_tag=C9E97_RS17920;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_135369509.1;transl_table=11
NZ_PYKA01000115.1	RefSeq	gene	154727	156766	.	+	.	ID=gene-C9E97_RS17925;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=C9E97_RS17925;old_locus_tag=C9E97_18320
NZ_PYKA01000115.1	Protein Homology	CDS	154727	156766	.	+	0	ID=cds-WP_135369510.1;Parent=gene-C9E97_RS17925;Dbxref=GenBank:WP_135369510.1;Name=WP_135369510.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=C9E97_RS17925;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_135369510.1;transl_table=11
##sequence-region NZ_PYKA01000078.1 1 36614
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000078.1	RefSeq	region	1	36614	.	+	.	ID=NZ_PYKA01000078.1:1..36614;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000078.1	RefSeq	pseudogene	926	1066	.	-	.	ID=gene-C9E97_RS23565;Name=C9E97_RS23565;end_range=1066,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23565;old_locus_tag=C9E97_11190;partial=true;pseudo=true
NZ_PYKA01000078.1	Protein Homology	CDS	926	1066	.	-	0	ID=cds-C9E97_RS23565;Parent=gene-C9E97_RS23565;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1066,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308261.1;locus_tag=C9E97_RS23565;partial=true;product=type VI secretion system tube protein Hcp;pseudo=true;transl_table=11
NZ_PYKA01000078.1	RefSeq	pseudogene	1103	1760	.	-	.	ID=gene-C9E97_RS23570;Name=C9E97_RS23570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23570;partial=true;pseudo=true;start_range=.,1103
NZ_PYKA01000078.1	Protein Homology	CDS	1103	1760	.	-	0	ID=cds-C9E97_RS23570;Parent=gene-C9E97_RS23570;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001219011.1;locus_tag=C9E97_RS23570;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,1103;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	1920	1995	.	-	.	ID=gene-C9E97_RS10950;Name=C9E97_RS10950;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS10950;old_locus_tag=C9E97_11205
NZ_PYKA01000078.1	tRNAscan-SE	tRNA	1920	1995	.	-	.	ID=rna-C9E97_RS10950;Parent=gene-C9E97_RS10950;anticodon=(pos:complement(1960..1962));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS10950;product=tRNA-Phe
NZ_PYKA01000078.1	tRNAscan-SE	exon	1920	1995	.	-	.	ID=exon-C9E97_RS10950-1;Parent=rna-C9E97_RS10950;anticodon=(pos:complement(1960..1962));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS10950;product=tRNA-Phe
NZ_PYKA01000078.1	RefSeq	gene	2101	2808	.	-	.	ID=gene-C9E97_RS10955;Name=C9E97_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10955;old_locus_tag=C9E97_11210
NZ_PYKA01000078.1	Protein Homology	CDS	2101	2808	.	-	0	ID=cds-WP_000234466.1;Parent=gene-C9E97_RS10955;Dbxref=GenBank:WP_000234466.1;Name=WP_000234466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462031.1;locus_tag=C9E97_RS10955;product=DUF554 domain-containing protein;protein_id=WP_000234466.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	3234	5369	.	+	.	ID=gene-C9E97_RS10960;Name=C9E97_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10960;old_locus_tag=C9E97_11220
NZ_PYKA01000078.1	Protein Homology	CDS	3234	5369	.	+	0	ID=cds-WP_020899203.1;Parent=gene-C9E97_RS10960;Dbxref=GenBank:WP_020899203.1;Name=WP_020899203.1;Ontology_term=GO:0006596,GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;go_process=polyamine biosynthetic process|0006596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462030.1;locus_tag=C9E97_RS10960;product=ornithine decarboxylase;protein_id=WP_020899203.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	5431	6687	.	-	.	ID=gene-C9E97_RS10965;Name=C9E97_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10965;old_locus_tag=C9E97_11225
NZ_PYKA01000078.1	Protein Homology	CDS	5431	6687	.	-	0	ID=cds-WP_001049804.1;Parent=gene-C9E97_RS10965;Dbxref=GenBank:WP_001049804.1;Name=WP_001049804.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462029.1;locus_tag=C9E97_RS10965;product=nucleoside permease;protein_id=WP_001049804.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	6904	7989	.	-	.	ID=gene-C9E97_RS10970;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=C9E97_RS10970;old_locus_tag=C9E97_11230
NZ_PYKA01000078.1	Protein Homology	CDS	6904	7989	.	-	0	ID=cds-WP_000976289.1;Parent=gene-C9E97_RS10970;Dbxref=GenBank:WP_000976289.1;Name=WP_000976289.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462028.1;locus_tag=C9E97_RS10970;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_000976289.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	8102	8377	.	-	.	ID=gene-C9E97_RS10975;Name=C9E97_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10975;old_locus_tag=C9E97_11235
NZ_PYKA01000078.1	Protein Homology	CDS	8102	8377	.	-	0	ID=cds-WP_000091706.1;Parent=gene-C9E97_RS10975;Dbxref=GenBank:WP_000091706.1;Name=WP_000091706.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462027.1;locus_tag=C9E97_RS10975;product=oxidative damage protection protein;protein_id=WP_000091706.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	8405	9457	.	-	.	ID=gene-C9E97_RS10980;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=C9E97_RS10980;old_locus_tag=C9E97_11240
NZ_PYKA01000078.1	Protein Homology	CDS	8405	9457	.	-	0	ID=cds-WP_001148959.1;Parent=gene-C9E97_RS10980;Dbxref=GenBank:WP_001148959.1;Name=WP_001148959.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462026.1;locus_tag=C9E97_RS10980;product=A/G-specific adenine glycosylase;protein_id=WP_001148959.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	9612	10331	.	+	.	ID=gene-C9E97_RS10985;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=C9E97_RS10985;old_locus_tag=C9E97_11250
NZ_PYKA01000078.1	Protein Homology	CDS	9612	10331	.	+	0	ID=cds-WP_000786890.1;Parent=gene-C9E97_RS10985;Dbxref=GenBank:WP_000786890.1;Name=WP_000786890.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462025.1;locus_tag=C9E97_RS10985;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_000786890.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	10331	10657	.	+	.	ID=gene-C9E97_RS10990;Name=C9E97_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10990;old_locus_tag=C9E97_11255
NZ_PYKA01000078.1	Protein Homology	CDS	10331	10657	.	+	0	ID=cds-WP_001107574.1;Parent=gene-C9E97_RS10990;Dbxref=GenBank:WP_001107574.1;Name=WP_001107574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462024.1;locus_tag=C9E97_RS10990;product=YggL family protein;protein_id=WP_001107574.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	10707	11426	.	+	.	ID=gene-C9E97_RS10995;Name=C9E97_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10995;old_locus_tag=C9E97_11260
NZ_PYKA01000078.1	Protein Homology	CDS	10707	11426	.	+	0	ID=cds-WP_135369394.1;Parent=gene-C9E97_RS10995;Dbxref=GenBank:WP_135369394.1;Name=WP_135369394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462023.1;locus_tag=C9E97_RS10995;product=DUF2884 domain-containing protein;protein_id=WP_135369394.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	11615	12661	.	+	.	ID=gene-C9E97_RS11000;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=C9E97_RS11000;old_locus_tag=C9E97_11265
NZ_PYKA01000078.1	Protein Homology	CDS	11615	12661	.	+	0	ID=cds-WP_000394189.1;Parent=gene-C9E97_RS11000;Dbxref=GenBank:WP_000394189.1;Name=WP_000394189.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462022.1;locus_tag=C9E97_RS11000;product=L-asparaginase 2;protein_id=WP_000394189.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	12794	13801	.	+	.	ID=gene-C9E97_RS11005;Name=C9E97_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11005;old_locus_tag=C9E97_11270
NZ_PYKA01000078.1	Protein Homology	CDS	12794	13801	.	+	0	ID=cds-WP_000252196.1;Parent=gene-C9E97_RS11005;Dbxref=GenBank:WP_000252196.1;Name=WP_000252196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462021.1;locus_tag=C9E97_RS11005;product=DUF1202 domain-containing protein;protein_id=WP_000252196.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	13893	15029	.	-	.	ID=gene-C9E97_RS11010;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=C9E97_RS11010;old_locus_tag=C9E97_11275
NZ_PYKA01000078.1	Protein Homology	CDS	13893	15029	.	-	0	ID=cds-WP_023214414.1;Parent=gene-C9E97_RS11010;Dbxref=GenBank:WP_023214414.1;Name=WP_023214414.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462020.1;locus_tag=C9E97_RS11010;product=radical SAM family heme chaperone HemW;protein_id=WP_023214414.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	15022	15615	.	-	.	ID=gene-C9E97_RS11015;Name=C9E97_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11015;old_locus_tag=C9E97_11280
NZ_PYKA01000078.1	Protein Homology	CDS	15022	15615	.	-	0	ID=cds-WP_001174769.1;Parent=gene-C9E97_RS11015;Dbxref=GenBank:WP_001174769.1;Name=WP_001174769.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462019.1;locus_tag=C9E97_RS11015;product=XTP/dITP diphosphatase;protein_id=WP_001174769.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	15623	15913	.	-	.	ID=gene-C9E97_RS11020;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=C9E97_RS11020;old_locus_tag=C9E97_11285
NZ_PYKA01000078.1	Protein Homology	CDS	15623	15913	.	-	0	ID=cds-WP_001277205.1;Parent=gene-C9E97_RS11020;Dbxref=GenBank:WP_001277205.1;Name=WP_001277205.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462018.1;locus_tag=C9E97_RS11020;product=DUF167 family protein YggU;protein_id=WP_001277205.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	15910	16476	.	-	.	ID=gene-C9E97_RS11025;Name=C9E97_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11025;old_locus_tag=C9E97_11290
NZ_PYKA01000078.1	Protein Homology	CDS	15910	16476	.	-	0	ID=cds-WP_001094848.1;Parent=gene-C9E97_RS11025;Dbxref=GenBank:WP_001094848.1;Name=WP_001094848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462017.1;locus_tag=C9E97_RS11025;product=YggT family protein;protein_id=WP_001094848.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	16495	17199	.	-	.	ID=gene-C9E97_RS11030;Name=C9E97_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11030;old_locus_tag=C9E97_11295
NZ_PYKA01000078.1	Protein Homology	CDS	16495	17199	.	-	0	ID=cds-WP_000997790.1;Parent=gene-C9E97_RS11030;Dbxref=GenBank:WP_000997790.1;Name=WP_000997790.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462016.1;locus_tag=C9E97_RS11030;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_000997790.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	17217	18197	.	+	.	ID=gene-C9E97_RS11035;Name=C9E97_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11035;old_locus_tag=C9E97_11300
NZ_PYKA01000078.1	Protein Homology	CDS	17217	18197	.	+	0	ID=cds-WP_023237543.1;Parent=gene-C9E97_RS11035;Dbxref=GenBank:WP_023237543.1;Name=WP_023237543.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462015.1;locus_tag=C9E97_RS11035;product=type IV pilus twitching motility protein PilT;protein_id=WP_023237543.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	18329	19015	.	+	.	ID=gene-C9E97_RS11040;Name=C9E97_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11040;old_locus_tag=C9E97_11305
NZ_PYKA01000078.1	Protein Homology	CDS	18329	19015	.	+	0	ID=cds-WP_000098324.1;Parent=gene-C9E97_RS11040;Dbxref=GenBank:WP_000098324.1;Name=WP_000098324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462014.1;locus_tag=C9E97_RS11040;product=IclR family transcriptional regulator domain-containing protein;protein_id=WP_000098324.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	19062	19478	.	-	.	ID=gene-C9E97_RS11045;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=C9E97_RS11045;old_locus_tag=C9E97_11310
NZ_PYKA01000078.1	Protein Homology	CDS	19062	19478	.	-	0	ID=cds-WP_000017096.1;Parent=gene-C9E97_RS11045;Dbxref=GenBank:WP_000017096.1;Name=WP_000017096.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462013.1;locus_tag=C9E97_RS11045;product=Holliday junction resolvase RuvX;protein_id=WP_000017096.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	19478	20041	.	-	.	ID=gene-C9E97_RS11050;Name=C9E97_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11050;old_locus_tag=C9E97_11315
NZ_PYKA01000078.1	Protein Homology	CDS	19478	20041	.	-	0	ID=cds-WP_001053173.1;Parent=gene-C9E97_RS11050;Dbxref=GenBank:WP_001053173.1;Name=WP_001053173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=C9E97_RS11050;product=YqgE/AlgH family protein;protein_id=WP_001053173.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	20257	21204	.	-	.	ID=gene-C9E97_RS11055;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=C9E97_RS11055;old_locus_tag=C9E97_11320
NZ_PYKA01000078.1	Protein Homology	CDS	20257	21204	.	-	0	ID=cds-WP_000593248.1;Parent=gene-C9E97_RS11055;Dbxref=GenBank:WP_000593248.1;Name=WP_000593248.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462011.1;locus_tag=C9E97_RS11055;product=glutathione synthase;protein_id=WP_000593248.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	21224	21955	.	-	.	ID=gene-C9E97_RS11060;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=C9E97_RS11060;old_locus_tag=C9E97_11325
NZ_PYKA01000078.1	Protein Homology	CDS	21224	21955	.	-	0	ID=cds-WP_001222489.1;Parent=gene-C9E97_RS11060;Dbxref=GenBank:WP_001222489.1;Name=WP_001222489.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=C9E97_RS11060;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_001222489.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	22032	22739	.	-	.	ID=gene-C9E97_RS11065;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=C9E97_RS11065;old_locus_tag=C9E97_11330
NZ_PYKA01000078.1	Protein Homology	CDS	22032	22739	.	-	0	ID=cds-WP_000286133.1;Parent=gene-C9E97_RS11065;Dbxref=GenBank:WP_000286133.1;Name=WP_000286133.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462009.1;locus_tag=C9E97_RS11065;product=deoxyribonuclease I;protein_id=WP_000286133.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	22835	23332	.	-	.	ID=gene-C9E97_RS11070;Name=C9E97_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11070;old_locus_tag=C9E97_11335
NZ_PYKA01000078.1	Protein Homology	CDS	22835	23332	.	-	0	ID=cds-WP_000856775.1;Parent=gene-C9E97_RS11070;Dbxref=GenBank:WP_000856775.1;Name=WP_000856775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462008.1;locus_tag=C9E97_RS11070;product=SprT family zinc-dependent metalloprotease;protein_id=WP_000856775.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	23411	24805	.	-	.	ID=gene-C9E97_RS11075;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=C9E97_RS11075;old_locus_tag=C9E97_11340
NZ_PYKA01000078.1	Protein Homology	CDS	23411	24805	.	-	0	ID=cds-WP_001113171.1;Parent=gene-C9E97_RS11075;Dbxref=GenBank:WP_001113171.1;Name=WP_001113171.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462007.1;locus_tag=C9E97_RS11075;product=galactose/proton symporter;protein_id=WP_001113171.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	25298	26452	.	-	.	ID=gene-C9E97_RS11080;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=C9E97_RS11080;old_locus_tag=C9E97_11345
NZ_PYKA01000078.1	Protein Homology	CDS	25298	26452	.	-	0	ID=cds-WP_001062140.1;Parent=gene-C9E97_RS11080;Dbxref=GenBank:WP_001062140.1;Name=WP_001062140.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=C9E97_RS11080;product=methionine adenosyltransferase;protein_id=WP_001062140.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	26508	26807	.	+	.	ID=gene-C9E97_RS11085;Name=C9E97_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11085;old_locus_tag=C9E97_11350
NZ_PYKA01000078.1	GeneMarkS-2+	CDS	26508	26807	.	+	0	ID=cds-WP_001540882.1;Parent=gene-C9E97_RS11085;Dbxref=GenBank:WP_001540882.1;Name=WP_001540882.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E97_RS11085;product=hypothetical protein;protein_id=WP_001540882.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	26867	27016	.	+	.	ID=gene-C9E97_RS23935;Name=C9E97_RS23935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23935
NZ_PYKA01000078.1	Protein Homology	CDS	26867	27016	.	+	0	ID=cds-WP_001751809.1;Parent=gene-C9E97_RS23935;Dbxref=GenBank:WP_001751809.1;Name=WP_001751809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=C9E97_RS23935;product=hypothetical protein;protein_id=WP_001751809.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	27102	27233	.	+	.	ID=gene-C9E97_RS11095;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=C9E97_RS11095;old_locus_tag=C9E97_11360
NZ_PYKA01000078.1	Protein Homology	CDS	27102	27233	.	+	0	ID=cds-WP_000729109.1;Parent=gene-C9E97_RS11095;Dbxref=GenBank:WP_000729109.1;Name=WP_000729109.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462003.1;locus_tag=C9E97_RS11095;product=acid stress response protein YqgB;protein_id=WP_000729109.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	27242	29218	.	+	.	ID=gene-C9E97_RS11100;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=C9E97_RS11100;old_locus_tag=C9E97_11365
NZ_PYKA01000078.1	Protein Homology	CDS	27242	29218	.	+	0	ID=cds-WP_001278580.1;Parent=gene-C9E97_RS11100;Dbxref=GenBank:WP_001278580.1;Name=WP_001278580.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462002.1;locus_tag=C9E97_RS11100;product=biosynthetic arginine decarboxylase;protein_id=WP_001278580.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	29363	30094	.	+	.	ID=gene-C9E97_RS11105;Name=C9E97_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11105;old_locus_tag=C9E97_11370
NZ_PYKA01000078.1	Protein Homology	CDS	29363	30094	.	+	0	ID=cds-WP_000032796.1;Parent=gene-C9E97_RS11105;Dbxref=GenBank:WP_000032796.1;Name=WP_000032796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462001.1;locus_tag=C9E97_RS11105;product=hypothetical protein;protein_id=WP_000032796.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	30248	31048	.	+	.	ID=gene-C9E97_RS11110;Name=C9E97_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11110;old_locus_tag=C9E97_11375
NZ_PYKA01000078.1	Protein Homology	CDS	30248	31048	.	+	0	ID=cds-WP_001576357.1;Parent=gene-C9E97_RS11110;Dbxref=GenBank:WP_001576357.1;Name=WP_001576357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462000.3;locus_tag=C9E97_RS11110;product=FadR/GntR family transcriptional regulator;protein_id=WP_001576357.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	31363	31470	.	-	.	ID=gene-C9E97_RS23990;Name=C9E97_RS23990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23990
NZ_PYKA01000078.1	Protein Homology	CDS	31363	31470	.	-	0	ID=cds-WP_001667677.1;Parent=gene-C9E97_RS23990;Dbxref=GenBank:WP_001667677.1;Name=WP_001667677.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014766.6;locus_tag=C9E97_RS23990;product=racemase;protein_id=WP_001667677.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	32281	33753	.	+	.	ID=gene-C9E97_RS11120;Name=C9E97_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11120;old_locus_tag=C9E97_11385
NZ_PYKA01000078.1	Protein Homology	CDS	32281	33753	.	+	0	ID=cds-WP_000379533.1;Parent=gene-C9E97_RS11120;Dbxref=GenBank:WP_000379533.1;Name=WP_000379533.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461999.1;locus_tag=C9E97_RS11120;product=mannitol dehydrogenase family protein;protein_id=WP_000379533.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	33756	34772	.	+	.	ID=gene-C9E97_RS11125;Name=C9E97_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11125;old_locus_tag=C9E97_11390
NZ_PYKA01000078.1	Protein Homology	CDS	33756	34772	.	+	0	ID=cds-WP_000853913.1;Parent=gene-C9E97_RS11125;Dbxref=GenBank:WP_000853913.1;Name=WP_000853913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461998.1;locus_tag=C9E97_RS11125;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_000853913.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	34786	35793	.	+	.	ID=gene-C9E97_RS11130;Name=C9E97_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11130;old_locus_tag=C9E97_11395
NZ_PYKA01000078.1	Protein Homology	CDS	34786	35793	.	+	0	ID=cds-WP_000104231.1;Parent=gene-C9E97_RS11130;Dbxref=GenBank:WP_000104231.1;Name=WP_000104231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461997.1;locus_tag=C9E97_RS11130;product=Ldh family oxidoreductase;protein_id=WP_000104231.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	gene	35832	36305	.	+	.	ID=gene-C9E97_RS11135;Name=C9E97_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11135;old_locus_tag=C9E97_11400
NZ_PYKA01000078.1	Protein Homology	CDS	35832	36305	.	+	0	ID=cds-WP_000965536.1;Parent=gene-C9E97_RS11135;Dbxref=GenBank:WP_000965536.1;Name=WP_000965536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461996.1;locus_tag=C9E97_RS11135;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000965536.1;transl_table=11
NZ_PYKA01000078.1	RefSeq	pseudogene	36519	36614	.	+	.	ID=gene-C9E97_RS11140;Name=C9E97_RS11140;end_range=36614,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS11140;old_locus_tag=C9E97_11405;partial=true;pseudo=true
NZ_PYKA01000078.1	Protein Homology	CDS	36519	36614	.	+	0	ID=cds-C9E97_RS11140;Parent=gene-C9E97_RS11140;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=36614,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461995.3;locus_tag=C9E97_RS11140;partial=true;product=alpha/beta fold hydrolase;pseudo=true;transl_table=11
##sequence-region NZ_PYKA01000128.1 1 36069
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000128.1	RefSeq	region	1	36069	.	+	.	ID=NZ_PYKA01000128.1:1..36069;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000128.1	RefSeq	gene	1	513	.	-	.	ID=gene-C9E97_RS20765;Name=C9E97_RS20765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20765;old_locus_tag=C9E97_21250;partial=true;start_range=.,1
NZ_PYKA01000128.1	Protein Homology	CDS	1	513	.	-	0	ID=cds-WP_167850515.1;Parent=gene-C9E97_RS20765;Dbxref=GenBank:WP_167850515.1;Name=WP_167850515.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406820.1;locus_tag=C9E97_RS20765;partial=true;product=MFS transporter;protein_id=WP_167850515.1;start_range=.,1;transl_table=11
NZ_PYKA01000128.1	RefSeq	gene	748	1872	.	-	.	ID=gene-C9E97_RS20770;Name=C9E97_RS20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20770;old_locus_tag=C9E97_21255
NZ_PYKA01000128.1	Protein Homology	CDS	748	1872	.	-	0	ID=cds-WP_001134811.1;Parent=gene-C9E97_RS20770;Dbxref=GenBank:WP_001134811.1;Name=WP_001134811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462984.1;locus_tag=C9E97_RS20770;product=hypothetical protein;protein_id=WP_001134811.1;transl_table=11
NZ_PYKA01000128.1	RefSeq	gene	2008	3564	.	+	.	ID=gene-C9E97_RS20775;Name=C9E97_RS20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20775;old_locus_tag=C9E97_21260
NZ_PYKA01000128.1	Protein Homology	CDS	2008	3564	.	+	0	ID=cds-WP_000865261.1;Parent=gene-C9E97_RS20775;Dbxref=GenBank:WP_000865261.1;Name=WP_000865261.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462985.1;locus_tag=C9E97_RS20775;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_000865261.1;transl_table=11
NZ_PYKA01000128.1	RefSeq	gene	3759	4649	.	+	.	ID=gene-C9E97_RS20780;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=C9E97_RS20780;old_locus_tag=C9E97_21265
NZ_PYKA01000128.1	Protein Homology	CDS	3759	4649	.	+	0	ID=cds-WP_000007507.1;Parent=gene-C9E97_RS20780;Dbxref=GenBank:WP_000007507.1;Name=WP_000007507.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462986.1;locus_tag=C9E97_RS20780;product=methylenetetrahydrofolate reductase;protein_id=WP_000007507.1;transl_table=11
NZ_PYKA01000128.1	RefSeq	gene	4814	6994	.	+	.	ID=gene-C9E97_RS20785;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=C9E97_RS20785;old_locus_tag=C9E97_21270
NZ_PYKA01000128.1	Protein Homology	CDS	4814	6994	.	+	0	ID=cds-WP_000108105.1;Parent=gene-C9E97_RS20785;Dbxref=GenBank:WP_000108105.1;Name=WP_000108105.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462987.1;locus_tag=C9E97_RS20785;product=catalase/peroxidase HPI;protein_id=WP_000108105.1;transl_table=11
NZ_PYKA01000128.1	RefSeq	gene	7052	7675	.	-	.	ID=gene-C9E97_RS20790;Name=C9E97_RS20790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20790;old_locus_tag=C9E97_21275
NZ_PYKA01000128.1	Protein Homology	CDS	7052	7675	.	-	0	ID=cds-WP_135369095.1;Parent=gene-C9E97_RS20790;Dbxref=GenBank:WP_135369095.1;Name=WP_135369095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462988.1;locus_tag=C9E97_RS20790;product=DUF1287 domain-containing protein;protein_id=WP_135369095.1;transl_table=11
NZ_PYKA01000128.1	RefSeq	gene	7934	9037	.	-	.	ID=gene-C9E97_RS20795;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=C9E97_RS20795;old_locus_tag=C9E97_21280
NZ_PYKA01000128.1	Protein Homology	CDS	7934	9037	.	-	0	ID=cds-WP_000374031.1;Parent=gene-C9E97_RS20795;Dbxref=GenBank:WP_000374031.1;Name=WP_000374031.1;Ontology_term=GO:0019588,GO:0051596,GO:0008888,GO:0019147;gbkey=CDS;gene=gldA;go_function=glycerol dehydrogenase (NAD+) activity|0008888||IEA,(R)-aminopropanol dehydrogenase activity|0019147||IEA;go_process=anaerobic glycerol catabolic process|0019588||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462989.1;locus_tag=C9E97_RS20795;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=WP_000374031.1;transl_table=11
NZ_PYKA01000128.1	RefSeq	gene	9049	9711	.	-	.	ID=gene-C9E97_RS20800;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=C9E97_RS20800;old_locus_tag=C9E97_21285
NZ_PYKA01000128.1	Protein Homology	CDS	9049	9711	.	-	0	ID=cds-WP_000424866.1;Parent=gene-C9E97_RS20800;Dbxref=GenBank:WP_000424866.1;Name=WP_000424866.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462990.1;locus_tag=C9E97_RS20800;product=fructose-6-phosphate aldolase;protein_id=WP_000424866.1;transl_table=11
NZ_PYKA01000128.1	RefSeq	gene	9722	12223	.	-	.	ID=gene-C9E97_RS20805;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=C9E97_RS20805;old_locus_tag=C9E97_21290
NZ_PYKA01000128.1	Protein Homology	CDS	9722	12223	.	-	0	ID=cds-WP_135369094.1;Parent=gene-C9E97_RS20805;Dbxref=GenBank:WP_135369094.1;Name=WP_135369094.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462991.1;locus_tag=C9E97_RS20805;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_135369094.1;transl_table=11
NZ_PYKA01000128.1	RefSeq	gene	12533	13612	.	+	.	ID=gene-C9E97_RS20810;Name=C9E97_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20810;old_locus_tag=C9E97_21295
NZ_PYKA01000128.1	Protein Homology	CDS	12533	13612	.	+	0	ID=cds-WP_000661597.1;Parent=gene-C9E97_RS20810;Dbxref=GenBank:WP_000661597.1;Name=WP_000661597.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462992.1;locus_tag=C9E97_RS20810;product=PTS fructose transporter subunit EIIC;protein_id=WP_000661597.1;transl_table=11
NZ_PYKA01000128.1	RefSeq	gene	13627	13947	.	+	.	ID=gene-C9E97_RS20815;Name=C9E97_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20815;old_locus_tag=C9E97_21300
NZ_PYKA01000128.1	Protein Homology	CDS	13627	13947	.	+	0	ID=cds-WP_000161258.1;Parent=gene-C9E97_RS20815;Dbxref=GenBank:WP_000161258.1;Name=WP_000161258.1;Ontology_term=GO:0009401,GO:0022877;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462993.1;locus_tag=C9E97_RS20815;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000161258.1;transl_table=11
NZ_PYKA01000128.1	RefSeq	gene	14046	16343	.	+	.	ID=gene-C9E97_RS20820;Name=C9E97_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20820;old_locus_tag=C9E97_21305
NZ_PYKA01000128.1	Protein Homology	CDS	14046	16343	.	+	0	ID=cds-WP_000149714.1;Parent=gene-C9E97_RS20820;Dbxref=GenBank:WP_000149714.1;Name=WP_000149714.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462994.1;locus_tag=C9E97_RS20820;product=formate C-acetyltransferase;protein_id=WP_000149714.1;transl_table=11
NZ_PYKA01000128.1	RefSeq	gene	16309	17187	.	+	.	ID=gene-C9E97_RS20825;Name=C9E97_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20825;old_locus_tag=C9E97_21310
NZ_PYKA01000128.1	Protein Homology	CDS	16309	17187	.	+	0	ID=cds-WP_000171724.1;Parent=gene-C9E97_RS20825;Dbxref=GenBank:WP_000171724.1;Name=WP_000171724.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462995.1;locus_tag=C9E97_RS20825;product=[formate-C-acetyltransferase]-activating enzyme;protein_id=WP_000171724.1;transl_table=11
NZ_PYKA01000128.1	RefSeq	gene	17189	17542	.	+	.	ID=gene-C9E97_RS20830;Name=C9E97_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20830;old_locus_tag=C9E97_21315
NZ_PYKA01000128.1	Protein Homology	CDS	17189	17542	.	+	0	ID=cds-WP_000290522.1;Parent=gene-C9E97_RS20830;Dbxref=GenBank:WP_000290522.1;Name=WP_000290522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462996.1;locus_tag=C9E97_RS20830;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000290522.1;transl_table=11
NZ_PYKA01000128.1	RefSeq	gene	17529	18380	.	-	.	ID=gene-C9E97_RS20835;Name=C9E97_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20835;old_locus_tag=C9E97_21320
NZ_PYKA01000128.1	Protein Homology	CDS	17529	18380	.	-	0	ID=cds-WP_000274596.1;Parent=gene-C9E97_RS20835;Dbxref=GenBank:WP_000274596.1;Name=WP_000274596.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462997.1;locus_tag=C9E97_RS20835;product=helix-turn-helix transcriptional regulator;protein_id=WP_000274596.1;transl_table=11
NZ_PYKA01000128.1	RefSeq	gene	18541	20274	.	-	.	ID=gene-C9E97_RS20840;Name=C9E97_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20840;old_locus_tag=C9E97_21325
NZ_PYKA01000128.1	Protein Homology	CDS	18541	20274	.	-	0	ID=cds-WP_058145360.1;Parent=gene-C9E97_RS20840;Dbxref=GenBank:WP_058145360.1;Name=WP_058145360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462998.1;locus_tag=C9E97_RS20840;product=phosphoethanolamine transferase CptA;protein_id=WP_058145360.1;transl_table=11
NZ_PYKA01000128.1	RefSeq	gene	20485	23136	.	-	.	ID=gene-C9E97_RS20845;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=C9E97_RS20845;old_locus_tag=C9E97_21330
NZ_PYKA01000128.1	Protein Homology	CDS	20485	23136	.	-	0	ID=cds-WP_001005548.1;Parent=gene-C9E97_RS20845;Dbxref=GenBank:WP_001005548.1;Name=WP_001005548.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=C9E97_RS20845;product=phosphoenolpyruvate carboxylase;protein_id=WP_001005548.1;transl_table=11
NZ_PYKA01000128.1	RefSeq	gene	23505	24656	.	-	.	ID=gene-C9E97_RS20850;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=C9E97_RS20850;old_locus_tag=C9E97_21340
NZ_PYKA01000128.1	Protein Homology	CDS	23505	24656	.	-	0	ID=cds-WP_000800208.1;Parent=gene-C9E97_RS20850;Dbxref=GenBank:WP_000800208.1;Name=WP_000800208.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463000.1;locus_tag=C9E97_RS20850;product=acetylornithine deacetylase;protein_id=WP_000800208.1;transl_table=11
NZ_PYKA01000128.1	RefSeq	gene	24745	25749	.	+	.	ID=gene-C9E97_RS20855;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=C9E97_RS20855;old_locus_tag=C9E97_21345
NZ_PYKA01000128.1	Protein Homology	CDS	24745	25749	.	+	0	ID=cds-WP_000935336.1;Parent=gene-C9E97_RS20855;Dbxref=GenBank:WP_000935336.1;Name=WP_000935336.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=C9E97_RS20855;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_000935336.1;transl_table=11
NZ_PYKA01000128.1	RefSeq	gene	25757	26533	.	+	.	ID=gene-C9E97_RS20860;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=C9E97_RS20860;old_locus_tag=C9E97_21350
NZ_PYKA01000128.1	Protein Homology	CDS	25757	26533	.	+	0	ID=cds-WP_001575262.1;Parent=gene-C9E97_RS20860;Dbxref=GenBank:WP_001575262.1;Name=WP_001575262.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=C9E97_RS20860;product=acetylglutamate kinase;protein_id=WP_001575262.1;transl_table=11
NZ_PYKA01000128.1	RefSeq	gene	26651	28027	.	+	.	ID=gene-C9E97_RS20865;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=C9E97_RS20865;old_locus_tag=C9E97_21355
NZ_PYKA01000128.1	Protein Homology	CDS	26651	28027	.	+	0	ID=cds-WP_001230048.1;Parent=gene-C9E97_RS20865;Dbxref=GenBank:WP_001230048.1;Name=WP_001230048.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463003.1;locus_tag=C9E97_RS20865;product=argininosuccinate lyase;protein_id=WP_001230048.1;transl_table=11
NZ_PYKA01000128.1	RefSeq	gene	28313	29230	.	+	.	ID=gene-C9E97_RS20870;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=C9E97_RS20870;old_locus_tag=C9E97_21365
NZ_PYKA01000128.1	Protein Homology	CDS	28313	29230	.	+	0	ID=cds-WP_001025919.1;Parent=gene-C9E97_RS20870;Dbxref=GenBank:WP_001025919.1;Name=WP_001025919.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=C9E97_RS20870;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_001025919.1;transl_table=11
NZ_PYKA01000128.1	RefSeq	gene	29213	30613	.	-	.	ID=gene-C9E97_RS20875;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=C9E97_RS20875;old_locus_tag=C9E97_21370
NZ_PYKA01000128.1	Protein Homology	CDS	29213	30613	.	-	0	ID=cds-WP_001120791.1;Parent=gene-C9E97_RS20875;Dbxref=GenBank:WP_001120791.1;Name=WP_001120791.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=C9E97_RS20875;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_001120791.1;transl_table=11
NZ_PYKA01000128.1	RefSeq	gene	30812	31447	.	+	.	ID=gene-C9E97_RS20880;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=C9E97_RS20880;old_locus_tag=C9E97_21375
NZ_PYKA01000128.1	Protein Homology	CDS	30812	31447	.	+	0	ID=cds-WP_000971958.1;Parent=gene-C9E97_RS20880;Dbxref=GenBank:WP_000971958.1;Name=WP_000971958.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463006.3;locus_tag=C9E97_RS20880;product=HTH-type transcriptional repressor FabR;protein_id=WP_000971958.1;transl_table=11
NZ_PYKA01000128.1	RefSeq	gene	31463	31822	.	+	.	ID=gene-C9E97_RS20885;Name=C9E97_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20885;old_locus_tag=C9E97_21380
NZ_PYKA01000128.1	Protein Homology	CDS	31463	31822	.	+	0	ID=cds-WP_000813838.1;Parent=gene-C9E97_RS20885;Dbxref=GenBank:WP_000813838.1;Name=WP_000813838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463007.1;locus_tag=C9E97_RS20885;product=YijD family membrane protein;protein_id=WP_000813838.1;transl_table=11
NZ_PYKA01000128.1	RefSeq	gene	31869	32969	.	-	.	ID=gene-C9E97_RS20890;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=C9E97_RS20890;old_locus_tag=C9E97_21385
NZ_PYKA01000128.1	Protein Homology	CDS	31869	32969	.	-	0	ID=cds-WP_000186981.1;Parent=gene-C9E97_RS20890;Dbxref=GenBank:WP_000186981.1;Name=WP_000186981.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463008.1;locus_tag=C9E97_RS20890;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_000186981.1;transl_table=11
NZ_PYKA01000128.1	cmsearch	riboswitch	33084	33276	.	+	.	ID=id-NZ_PYKA01000128.1:33084..33276;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PYKA01000128.1	RefSeq	gene	33343	35187	.	+	.	ID=gene-C9E97_RS20895;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=C9E97_RS20895;old_locus_tag=C9E97_21390
NZ_PYKA01000128.1	Protein Homology	CDS	33343	35187	.	+	0	ID=cds-WP_135369093.1;Parent=gene-C9E97_RS20895;Dbxref=GenBank:WP_135369093.1;Name=WP_135369093.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463009.1;locus_tag=C9E97_RS20895;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_135369093.1;transl_table=11
NZ_PYKA01000128.1	RefSeq	gene	35132	35983	.	+	.	ID=gene-C9E97_RS20900;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=C9E97_RS20900;old_locus_tag=C9E97_21395
NZ_PYKA01000128.1	Protein Homology	CDS	35132	35983	.	+	0	ID=cds-WP_000201805.1;Parent=gene-C9E97_RS20900;Dbxref=GenBank:WP_000201805.1;Name=WP_000201805.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463010.1;locus_tag=C9E97_RS20900;product=glutamate racemase;protein_id=WP_000201805.1;transl_table=11
##sequence-region NZ_PYKA01000093.1 1 35507
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000093.1	RefSeq	region	1	35507	.	+	.	ID=NZ_PYKA01000093.1:1..35507;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000093.1	RefSeq	gene	440	682	.	+	.	ID=gene-C9E97_RS12300;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=C9E97_RS12300;old_locus_tag=C9E97_12585
NZ_PYKA01000093.1	Protein Homology	CDS	440	682	.	+	0	ID=cds-WP_001541297.1;Parent=gene-C9E97_RS12300;Dbxref=GenBank:WP_001541297.1;Name=WP_001541297.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=C9E97_RS12300;product=exopolysaccharide production protein YjbE;protein_id=WP_001541297.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	746	1384	.	+	.	ID=gene-C9E97_RS12305;Name=C9E97_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12305;old_locus_tag=C9E97_12590
NZ_PYKA01000093.1	Protein Homology	CDS	746	1384	.	+	0	ID=cds-WP_000824804.1;Parent=gene-C9E97_RS12305;Dbxref=GenBank:WP_000824804.1;Name=WP_000824804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824802.1;locus_tag=C9E97_RS12305;product=YjbF family lipoprotein;protein_id=WP_000824804.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	1381	2118	.	+	.	ID=gene-C9E97_RS12310;Name=C9E97_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12310;old_locus_tag=C9E97_12595
NZ_PYKA01000093.1	Protein Homology	CDS	1381	2118	.	+	0	ID=cds-WP_135369076.1;Parent=gene-C9E97_RS12310;Dbxref=GenBank:WP_135369076.1;Name=WP_135369076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463089.1;locus_tag=C9E97_RS12310;product=capsule biosynthesis GfcC family protein;protein_id=WP_135369076.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	2118	4214	.	+	.	ID=gene-C9E97_RS12315;Name=C9E97_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12315;old_locus_tag=C9E97_12600
NZ_PYKA01000093.1	Protein Homology	CDS	2118	4214	.	+	0	ID=cds-WP_000750805.1;Parent=gene-C9E97_RS12315;Dbxref=GenBank:WP_000750805.1;Name=WP_000750805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463090.1;locus_tag=C9E97_RS12315;product=YjbH domain-containing protein;protein_id=WP_000750805.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	4357	4767	.	+	.	ID=gene-C9E97_RS12320;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=C9E97_RS12320;old_locus_tag=C9E97_12605
NZ_PYKA01000093.1	Protein Homology	CDS	4357	4767	.	+	0	ID=cds-WP_000982752.1;Parent=gene-C9E97_RS12320;Dbxref=GenBank:WP_000982752.1;Name=WP_000982752.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463091.1;locus_tag=C9E97_RS12320;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000982752.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	4933	5823	.	-	.	ID=gene-C9E97_RS12325;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=C9E97_RS12325;old_locus_tag=C9E97_12610
NZ_PYKA01000093.1	Protein Homology	CDS	4933	5823	.	-	0	ID=cds-WP_001252081.1;Parent=gene-C9E97_RS12325;Dbxref=GenBank:WP_001252081.1;Name=WP_001252081.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463092.1;locus_tag=C9E97_RS12325;product=maltose ABC transporter permease MalG;protein_id=WP_001252081.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	5838	7382	.	-	.	ID=gene-C9E97_RS12330;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=C9E97_RS12330;old_locus_tag=C9E97_12615
NZ_PYKA01000093.1	Protein Homology	CDS	5838	7382	.	-	0	ID=cds-WP_000382570.1;Parent=gene-C9E97_RS12330;Dbxref=GenBank:WP_000382570.1;Name=WP_000382570.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463093.1;locus_tag=C9E97_RS12330;product=maltose ABC transporter permease MalF;protein_id=WP_000382570.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	7514	8704	.	-	.	ID=gene-C9E97_RS12335;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=C9E97_RS12335;old_locus_tag=C9E97_12620
NZ_PYKA01000093.1	Protein Homology	CDS	7514	8704	.	-	0	ID=cds-WP_000695415.1;Parent=gene-C9E97_RS12335;Dbxref=GenBank:WP_000695415.1;Name=WP_000695415.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=C9E97_RS12335;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_000695415.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	9066	10175	.	+	.	ID=gene-C9E97_RS12340;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=C9E97_RS12340;old_locus_tag=C9E97_12625
NZ_PYKA01000093.1	Protein Homology	CDS	9066	10175	.	+	0	ID=cds-WP_000179176.1;Parent=gene-C9E97_RS12340;Dbxref=GenBank:WP_000179176.1;Name=WP_000179176.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=C9E97_RS12340;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_000179176.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	10264	11622	.	+	.	ID=gene-C9E97_RS12345;Name=C9E97_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12345;old_locus_tag=C9E97_12630
NZ_PYKA01000093.1	Protein Homology	CDS	10264	11622	.	+	0	ID=cds-WP_135369326.1;Parent=gene-C9E97_RS12345;Dbxref=GenBank:WP_135369326.1;Name=WP_135369326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463096.1;locus_tag=C9E97_RS12345;product=maltoporin;protein_id=WP_135369326.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	11786	12703	.	+	.	ID=gene-C9E97_RS12350;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=C9E97_RS12350;old_locus_tag=C9E97_12635
NZ_PYKA01000093.1	Protein Homology	CDS	11786	12703	.	+	0	ID=cds-WP_000782497.1;Parent=gene-C9E97_RS12350;Dbxref=GenBank:WP_000782497.1;Name=WP_000782497.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463097.1;locus_tag=C9E97_RS12350;product=maltose operon protein MalM;protein_id=WP_000782497.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	12884	13381	.	+	.	ID=gene-C9E97_RS12355;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=C9E97_RS12355;old_locus_tag=C9E97_12640
NZ_PYKA01000093.1	Protein Homology	CDS	12884	13381	.	+	0	ID=cds-WP_000019230.1;Parent=gene-C9E97_RS12355;Dbxref=GenBank:WP_000019230.1;Name=WP_000019230.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463098.1;locus_tag=C9E97_RS12355;product=chorismate lyase;protein_id=WP_000019230.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	13395	14267	.	+	.	ID=gene-C9E97_RS12360;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=C9E97_RS12360;old_locus_tag=C9E97_12645
NZ_PYKA01000093.1	Protein Homology	CDS	13395	14267	.	+	0	ID=cds-WP_000455249.1;Parent=gene-C9E97_RS12360;Dbxref=GenBank:WP_000455249.1;Name=WP_000455249.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463099.1;locus_tag=C9E97_RS12360;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_000455249.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	14366	16786	.	-	.	ID=gene-C9E97_RS12365;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=C9E97_RS12365;old_locus_tag=C9E97_12650
NZ_PYKA01000093.1	Protein Homology	CDS	14366	16786	.	-	0	ID=cds-WP_000017360.1;Parent=gene-C9E97_RS12365;Dbxref=GenBank:WP_000017360.1;Name=WP_000017360.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463100.1;locus_tag=C9E97_RS12365;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_000017360.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	16957	17325	.	+	.	ID=gene-C9E97_RS12370;Name=C9E97_RS12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12370;old_locus_tag=C9E97_12655
NZ_PYKA01000093.1	Protein Homology	CDS	16957	17325	.	+	0	ID=cds-WP_000002902.1;Parent=gene-C9E97_RS12370;Dbxref=GenBank:WP_000002902.1;Name=WP_000002902.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463101.1;locus_tag=C9E97_RS12370;product=diacylglycerol kinase;protein_id=WP_000002902.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	17434	18042	.	+	.	ID=gene-C9E97_RS12375;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=C9E97_RS12375;old_locus_tag=C9E97_12660
NZ_PYKA01000093.1	Protein Homology	CDS	17434	18042	.	+	0	ID=cds-WP_000646079.1;Parent=gene-C9E97_RS12375;Dbxref=GenBank:WP_000646079.1;Name=WP_000646079.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=C9E97_RS12375;product=transcriptional repressor LexA;protein_id=WP_000646079.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	18221	19546	.	+	.	ID=gene-C9E97_RS12380;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=C9E97_RS12380;old_locus_tag=C9E97_12665
NZ_PYKA01000093.1	Protein Homology	CDS	18221	19546	.	+	0	ID=cds-WP_001128103.1;Parent=gene-C9E97_RS12380;Dbxref=GenBank:WP_001128103.1;Name=WP_001128103.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463103.1;locus_tag=C9E97_RS12380;product=MATE family efflux transporter DinF;protein_id=WP_001128103.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	19543	19656	.	+	.	ID=gene-C9E97_RS12385;Name=C9E97_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12385;old_locus_tag=C9E97_12670
NZ_PYKA01000093.1	Protein Homology	CDS	19543	19656	.	+	0	ID=cds-WP_001575282.1;Parent=gene-C9E97_RS12385;Dbxref=GenBank:WP_001575282.1;Name=WP_001575282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463104.1;locus_tag=C9E97_RS12385;product=hypothetical protein;protein_id=WP_001575282.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	19678	19887	.	+	.	ID=gene-C9E97_RS12390;Name=C9E97_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12390;old_locus_tag=C9E97_12675
NZ_PYKA01000093.1	Protein Homology	CDS	19678	19887	.	+	0	ID=cds-WP_001030592.1;Parent=gene-C9E97_RS12390;Dbxref=GenBank:WP_001030592.1;Name=WP_001030592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=C9E97_RS12390;product=CsbD family protein;protein_id=WP_001030592.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	19987	20502	.	-	.	ID=gene-C9E97_RS12395;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=C9E97_RS12395;old_locus_tag=C9E97_12680
NZ_PYKA01000093.1	Protein Homology	CDS	19987	20502	.	-	0	ID=cds-WP_000416271.1;Parent=gene-C9E97_RS12395;Dbxref=GenBank:WP_000416271.1;Name=WP_000416271.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463106.1;locus_tag=C9E97_RS12395;product=zinc uptake transcriptional repressor Zur;protein_id=WP_000416271.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	20749	22059	.	+	.	ID=gene-C9E97_RS12400;Name=C9E97_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12400;old_locus_tag=C9E97_12685
NZ_PYKA01000093.1	Protein Homology	CDS	20749	22059	.	+	0	ID=cds-WP_001039335.1;Parent=gene-C9E97_RS12400;Dbxref=GenBank:WP_001039335.1;Name=WP_001039335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463107.1;locus_tag=C9E97_RS12400;product=conjugal transfer protein TraF;protein_id=WP_001039335.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	22147	23145	.	+	.	ID=gene-C9E97_RS12405;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=C9E97_RS12405;old_locus_tag=C9E97_12690
NZ_PYKA01000093.1	Protein Homology	CDS	22147	23145	.	+	0	ID=cds-WP_001182234.1;Parent=gene-C9E97_RS12405;Dbxref=GenBank:WP_001182234.1;Name=WP_001182234.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463108.1;locus_tag=C9E97_RS12405;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_001182234.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	23313	23555	.	+	.	ID=gene-C9E97_RS12410;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=C9E97_RS12410;old_locus_tag=C9E97_12695
NZ_PYKA01000093.1	Protein Homology	CDS	23313	23555	.	+	0	ID=cds-WP_000891417.1;Parent=gene-C9E97_RS12410;Dbxref=GenBank:WP_000891417.1;Name=WP_000891417.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463109.1;locus_tag=C9E97_RS12410;product=envelope stress response protein PspG;protein_id=WP_000891417.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	23730	24713	.	-	.	ID=gene-C9E97_RS12415;Name=C9E97_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12415;old_locus_tag=C9E97_12700
NZ_PYKA01000093.1	Protein Homology	CDS	23730	24713	.	-	0	ID=cds-WP_000235550.1;Parent=gene-C9E97_RS12415;Dbxref=GenBank:WP_000235550.1;Name=WP_000235550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463110.1;locus_tag=C9E97_RS12415;product=quinone oxidoreductase;protein_id=WP_000235550.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	24778	26193	.	+	.	ID=gene-C9E97_RS12420;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=C9E97_RS12420;old_locus_tag=C9E97_12705
NZ_PYKA01000093.1	Protein Homology	CDS	24778	26193	.	+	0	ID=cds-WP_000918353.1;Parent=gene-C9E97_RS12420;Dbxref=GenBank:WP_000918353.1;Name=WP_000918353.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463111.1;locus_tag=C9E97_RS12420;product=replicative DNA helicase;protein_id=WP_000918353.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	26225	27304	.	+	.	ID=gene-C9E97_RS12425;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=C9E97_RS12425;old_locus_tag=C9E97_12710
NZ_PYKA01000093.1	Protein Homology	CDS	26225	27304	.	+	0	ID=cds-WP_001147297.1;Parent=gene-C9E97_RS12425;Dbxref=GenBank:WP_001147297.1;Name=WP_001147297.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463112.1;locus_tag=C9E97_RS12425;product=alanine racemase;protein_id=WP_001147297.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	27490	28683	.	+	.	ID=gene-C9E97_RS12430;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=C9E97_RS12430;old_locus_tag=C9E97_12715
NZ_PYKA01000093.1	Protein Homology	CDS	27490	28683	.	+	0	ID=cds-WP_000486910.1;Parent=gene-C9E97_RS12430;Dbxref=GenBank:WP_000486910.1;Name=WP_000486910.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463113.1;locus_tag=C9E97_RS12430;product=aromatic amino acid transaminase;protein_id=WP_000486910.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	28870	29583	.	+	.	ID=gene-C9E97_RS12435;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=C9E97_RS12435;old_locus_tag=C9E97_12725
NZ_PYKA01000093.1	Protein Homology	CDS	28870	29583	.	+	0	ID=cds-WP_000724435.1;Parent=gene-C9E97_RS12435;Dbxref=GenBank:WP_000724435.1;Name=WP_000724435.1;Ontology_term=GO:0003993,GO:0030288;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463114.1;locus_tag=C9E97_RS12435;product=acid phosphatase AphA;protein_id=WP_000724435.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	29712	30128	.	+	.	ID=gene-C9E97_RS12440;Name=C9E97_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12440;old_locus_tag=C9E97_12730
NZ_PYKA01000093.1	Protein Homology	CDS	29712	30128	.	+	0	ID=cds-WP_000270392.1;Parent=gene-C9E97_RS12440;Dbxref=GenBank:WP_000270392.1;Name=WP_000270392.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463115.1;locus_tag=C9E97_RS12440;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_000270392.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	30131	30487	.	+	.	ID=gene-C9E97_RS12445;Name=C9E97_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12445;old_locus_tag=C9E97_12735
NZ_PYKA01000093.1	Protein Homology	CDS	30131	30487	.	+	0	ID=cds-WP_000155665.1;Parent=gene-C9E97_RS12445;Dbxref=GenBank:WP_000155665.1;Name=WP_000155665.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463116.1;locus_tag=C9E97_RS12445;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000155665.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	30488	30826	.	-	.	ID=gene-C9E97_RS12450;Name=C9E97_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12450;old_locus_tag=C9E97_12740
NZ_PYKA01000093.1	Protein Homology	CDS	30488	30826	.	-	0	ID=cds-WP_000146590.1;Parent=gene-C9E97_RS12450;Dbxref=GenBank:WP_000146590.1;Name=WP_000146590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463117.1;locus_tag=C9E97_RS12450;product=hypothetical protein;protein_id=WP_000146590.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	30813	31268	.	-	.	ID=gene-C9E97_RS12455;Name=C9E97_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12455;old_locus_tag=C9E97_12745
NZ_PYKA01000093.1	Protein Homology	CDS	30813	31268	.	-	0	ID=cds-WP_072104649.1;Parent=gene-C9E97_RS12455;Dbxref=GenBank:WP_072104649.1;Name=WP_072104649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463118.1;locus_tag=C9E97_RS12455;product=hypothetical protein;protein_id=WP_072104649.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	31400	34225	.	-	.	ID=gene-C9E97_RS12460;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=C9E97_RS12460;old_locus_tag=C9E97_12750
NZ_PYKA01000093.1	Protein Homology	CDS	31400	34225	.	-	0	ID=cds-WP_135369325.1;Parent=gene-C9E97_RS12460;Dbxref=GenBank:WP_135369325.1;Name=WP_135369325.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463119.1;locus_tag=C9E97_RS12460;product=excinuclease ABC subunit UvrA;protein_id=WP_135369325.1;transl_table=11
NZ_PYKA01000093.1	RefSeq	gene	34473	35003	.	+	.	ID=gene-C9E97_RS12470;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=C9E97_RS12470;old_locus_tag=C9E97_12760
NZ_PYKA01000093.1	Protein Homology	CDS	34473	35003	.	+	0	ID=cds-WP_000168322.1;Parent=gene-C9E97_RS12470;Dbxref=GenBank:WP_000168322.1;Name=WP_000168322.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463121.1;locus_tag=C9E97_RS12470;product=single-stranded DNA-binding protein SSB1;protein_id=WP_000168322.1;transl_table=11
##sequence-region NZ_PYKA01000086.1 1 33766
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000086.1	RefSeq	region	1	33766	.	+	.	ID=NZ_PYKA01000086.1:1..33766;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000086.1	RefSeq	gene	66	734	.	+	.	ID=gene-C9E97_RS11835;Name=C9E97_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11835;old_locus_tag=C9E97_12105
NZ_PYKA01000086.1	Protein Homology	CDS	66	734	.	+	0	ID=cds-WP_135369275.1;Parent=gene-C9E97_RS11835;Dbxref=GenBank:WP_135369275.1;Name=WP_135369275.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462129.1;locus_tag=C9E97_RS11835;product=PadR family transcriptional regulator;protein_id=WP_135369275.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	731	2296	.	-	.	ID=gene-C9E97_RS11840;Name=C9E97_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11840;old_locus_tag=C9E97_12110
NZ_PYKA01000086.1	Protein Homology	CDS	731	2296	.	-	0	ID=cds-WP_000478471.1;Parent=gene-C9E97_RS11840;Dbxref=GenBank:WP_000478471.1;Name=WP_000478471.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462130.1;locus_tag=C9E97_RS11840;product=methyl-accepting chemotaxis protein;protein_id=WP_000478471.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	2684	4204	.	-	.	ID=gene-C9E97_RS11845;Name=C9E97_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11845;old_locus_tag=C9E97_12115
NZ_PYKA01000086.1	Protein Homology	CDS	2684	4204	.	-	0	ID=cds-WP_000094645.1;Parent=gene-C9E97_RS11845;Dbxref=GenBank:WP_000094645.1;Name=WP_000094645.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462131.1;locus_tag=C9E97_RS11845;product=methyl-accepting chemotaxis protein;protein_id=WP_000094645.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	4634	6013	.	+	.	ID=gene-C9E97_RS11850;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=C9E97_RS11850;old_locus_tag=C9E97_12125
NZ_PYKA01000086.1	Protein Homology	CDS	4634	6013	.	+	0	ID=cds-WP_001520281.1;Parent=gene-C9E97_RS11850;Dbxref=GenBank:WP_001520281.1;Name=WP_001520281.1;Ontology_term=GO:0009447,GO:0030170,GO:0033094;gbkey=CDS;gene=ygjG;go_function=pyridoxal phosphate binding|0030170||IEA,putrescine--2-oxoglutarate transaminase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894971.1;locus_tag=C9E97_RS11850;product=putrescine aminotransferase;protein_id=WP_001520281.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	6184	8202	.	+	.	ID=gene-C9E97_RS11855;Name=C9E97_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11855;old_locus_tag=C9E97_12130
NZ_PYKA01000086.1	Protein Homology	CDS	6184	8202	.	+	0	ID=cds-WP_000121533.1;Parent=gene-C9E97_RS11855;Dbxref=GenBank:WP_000121533.1;Name=WP_000121533.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=C9E97_RS11855;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_000121533.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	8283	9419	.	-	.	ID=gene-C9E97_RS11860;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=C9E97_RS11860;old_locus_tag=C9E97_12135
NZ_PYKA01000086.1	Protein Homology	CDS	8283	9419	.	-	0	ID=cds-WP_000019989.1;Parent=gene-C9E97_RS11860;Dbxref=GenBank:WP_000019989.1;Name=WP_000019989.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462134.1;locus_tag=C9E97_RS11860;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_000019989.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	9505	10002	.	+	.	ID=gene-C9E97_RS11865;Name=C9E97_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11865;old_locus_tag=C9E97_12140
NZ_PYKA01000086.1	Protein Homology	CDS	9505	10002	.	+	0	ID=cds-WP_000202966.1;Parent=gene-C9E97_RS11865;Dbxref=GenBank:WP_000202966.1;Name=WP_000202966.1;Ontology_term=GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462135.1;locus_tag=C9E97_RS11865;product=M48 metallopeptidase family protein;protein_id=WP_000202966.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	10154	10846	.	+	.	ID=gene-C9E97_RS11870;Name=C9E97_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11870;old_locus_tag=C9E97_12145
NZ_PYKA01000086.1	Protein Homology	CDS	10154	10846	.	+	0	ID=cds-WP_000951045.1;Parent=gene-C9E97_RS11870;Dbxref=GenBank:WP_000951045.1;Name=WP_000951045.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462136.1;locus_tag=C9E97_RS11870;product=SanA/YdcF family protein;protein_id=WP_000951045.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	10935	11933	.	+	.	ID=gene-C9E97_RS11875;Name=C9E97_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11875;old_locus_tag=C9E97_12150
NZ_PYKA01000086.1	Protein Homology	CDS	10935	11933	.	+	0	ID=cds-WP_064047046.1;Parent=gene-C9E97_RS11875;Dbxref=GenBank:WP_064047046.1;Name=WP_064047046.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462137.1;locus_tag=C9E97_RS11875;product=Gfo/Idh/MocA family protein;protein_id=WP_064047046.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	12204	13172	.	+	.	ID=gene-C9E97_RS11880;Name=C9E97_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11880;old_locus_tag=C9E97_12155
NZ_PYKA01000086.1	Protein Homology	CDS	12204	13172	.	+	0	ID=cds-WP_001098837.1;Parent=gene-C9E97_RS11880;Dbxref=GenBank:WP_001098837.1;Name=WP_001098837.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462138.1;locus_tag=C9E97_RS11880;product=TerC family protein;protein_id=WP_001098837.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	13427	14671	.	+	.	ID=gene-C9E97_RS11885;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=C9E97_RS11885;old_locus_tag=C9E97_12160
NZ_PYKA01000086.1	Protein Homology	CDS	13427	14671	.	+	0	ID=cds-WP_000235363.1;Parent=gene-C9E97_RS11885;Dbxref=GenBank:WP_000235363.1;Name=WP_000235363.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462139.1;locus_tag=C9E97_RS11885;product=serine/threonine transporter SstT;protein_id=WP_000235363.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	15121	15783	.	+	.	ID=gene-C9E97_RS11890;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=C9E97_RS11890;old_locus_tag=C9E97_12170
NZ_PYKA01000086.1	Protein Homology	CDS	15121	15783	.	+	0	ID=cds-WP_000422143.1;Parent=gene-C9E97_RS11890;Dbxref=GenBank:WP_000422143.1;Name=WP_000422143.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462140.1;locus_tag=C9E97_RS11890;product=DedA family general envelope maintenance protein YqjA;protein_id=WP_000422143.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	15787	16170	.	+	.	ID=gene-C9E97_RS11895;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=C9E97_RS11895;old_locus_tag=C9E97_12175
NZ_PYKA01000086.1	Protein Homology	CDS	15787	16170	.	+	0	ID=cds-WP_000917516.1;Parent=gene-C9E97_RS11895;Dbxref=GenBank:WP_000917516.1;Name=WP_000917516.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462141.1;locus_tag=C9E97_RS11895;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_000917516.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	16315	16683	.	+	.	ID=gene-C9E97_RS11900;Name=C9E97_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11900;old_locus_tag=C9E97_12180
NZ_PYKA01000086.1	Protein Homology	CDS	16315	16683	.	+	0	ID=cds-WP_000877297.1;Parent=gene-C9E97_RS11900;Dbxref=GenBank:WP_000877297.1;Name=WP_000877297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462142.1;locus_tag=C9E97_RS11900;product=DUF1090 domain-containing protein;protein_id=WP_000877297.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	16725	17030	.	+	.	ID=gene-C9E97_RS11905;Name=C9E97_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11905;old_locus_tag=C9E97_12185
NZ_PYKA01000086.1	Protein Homology	CDS	16725	17030	.	+	0	ID=cds-WP_000031219.1;Parent=gene-C9E97_RS11905;Dbxref=GenBank:WP_000031219.1;Name=WP_000031219.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462143.1;locus_tag=C9E97_RS11905;product=DUF883 family protein;protein_id=WP_000031219.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	17033	17431	.	+	.	ID=gene-C9E97_RS11910;Name=C9E97_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11910;old_locus_tag=C9E97_12190
NZ_PYKA01000086.1	Protein Homology	CDS	17033	17431	.	+	0	ID=cds-WP_000785623.1;Parent=gene-C9E97_RS11910;Dbxref=GenBank:WP_000785623.1;Name=WP_000785623.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462144.1;locus_tag=C9E97_RS11910;product=phage holin family protein;protein_id=WP_000785623.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	17428	17727	.	+	.	ID=gene-C9E97_RS11915;Name=C9E97_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11915;old_locus_tag=C9E97_12195
NZ_PYKA01000086.1	Protein Homology	CDS	17428	17727	.	+	0	ID=cds-WP_000095496.1;Parent=gene-C9E97_RS11915;Dbxref=GenBank:WP_000095496.1;Name=WP_000095496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462145.1;locus_tag=C9E97_RS11915;product=YqjK-like family protein;protein_id=WP_000095496.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	17965	18357	.	+	.	ID=gene-C9E97_RS11920;Name=C9E97_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11920;old_locus_tag=C9E97_12200
NZ_PYKA01000086.1	Protein Homology	CDS	17965	18357	.	+	0	ID=cds-WP_001592732.1;Parent=gene-C9E97_RS11920;Dbxref=GenBank:WP_001592732.1;Name=WP_001592732.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=C9E97_RS11920;product=DoxX family protein;protein_id=WP_001592732.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	18425	19411	.	+	.	ID=gene-C9E97_RS11925;Name=C9E97_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11925;old_locus_tag=C9E97_12205
NZ_PYKA01000086.1	Protein Homology	CDS	18425	19411	.	+	0	ID=cds-WP_000531163.1;Parent=gene-C9E97_RS11925;Dbxref=GenBank:WP_000531163.1;Name=WP_000531163.1;Ontology_term=GO:0004364,GO:0016491;gbkey=CDS;go_function=glutathione transferase activity|0004364||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462147.1;locus_tag=C9E97_RS11925;product=glutathione S-transferase family protein;protein_id=WP_000531163.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	19535	19900	.	+	.	ID=gene-C9E97_RS11930;Name=C9E97_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11930;old_locus_tag=C9E97_12210
NZ_PYKA01000086.1	Protein Homology	CDS	19535	19900	.	+	0	ID=cds-WP_000384139.1;Parent=gene-C9E97_RS11930;Dbxref=GenBank:WP_000384139.1;Name=WP_000384139.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462148.1;locus_tag=C9E97_RS11930;product=DUF805 domain-containing protein;protein_id=WP_000384139.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	19939	20835	.	-	.	ID=gene-C9E97_RS11935;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=C9E97_RS11935;old_locus_tag=C9E97_12215
NZ_PYKA01000086.1	Protein Homology	CDS	19939	20835	.	-	0	ID=cds-WP_001041026.1;Parent=gene-C9E97_RS11935;Dbxref=GenBank:WP_001041026.1;Name=WP_001041026.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462149.1;locus_tag=C9E97_RS11935;product=DNA-binding transcriptional regulator YhaJ;protein_id=WP_001041026.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	20940	21641	.	+	.	ID=gene-C9E97_RS11940;Name=C9E97_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11940;old_locus_tag=C9E97_12220
NZ_PYKA01000086.1	Protein Homology	CDS	20940	21641	.	+	0	ID=cds-WP_050067911.1;Parent=gene-C9E97_RS11940;Dbxref=GenBank:WP_050067911.1;Name=WP_050067911.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462150.1;locus_tag=C9E97_RS11940;product=pirin family protein;protein_id=WP_050067911.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	21665	21829	.	+	.	ID=gene-C9E97_RS11945;Name=C9E97_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11945;old_locus_tag=C9E97_12225
NZ_PYKA01000086.1	Protein Homology	CDS	21665	21829	.	+	0	ID=cds-WP_000039326.1;Parent=gene-C9E97_RS11945;Dbxref=GenBank:WP_000039326.1;Name=WP_000039326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462151.1;locus_tag=C9E97_RS11945;product=hypothetical protein;protein_id=WP_000039326.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	21942	23252	.	-	.	ID=gene-C9E97_RS11950;Name=C9E97_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11950;old_locus_tag=C9E97_12230
NZ_PYKA01000086.1	Protein Homology	CDS	21942	23252	.	-	0	ID=cds-WP_000463070.1;Parent=gene-C9E97_RS11950;Dbxref=GenBank:WP_000463070.1;Name=WP_000463070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462152.1;locus_tag=C9E97_RS11950;product=serine dehydratase subunit alpha family protein;protein_id=WP_000463070.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	23278	24609	.	-	.	ID=gene-C9E97_RS11955;Name=C9E97_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11955;old_locus_tag=C9E97_12235
NZ_PYKA01000086.1	Protein Homology	CDS	23278	24609	.	-	0	ID=cds-WP_135369274.1;Parent=gene-C9E97_RS11955;Dbxref=GenBank:WP_135369274.1;Name=WP_135369274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462153.1;locus_tag=C9E97_RS11955;product=amino acid permease;protein_id=WP_135369274.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	24925	26289	.	-	.	ID=gene-C9E97_RS11960;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;locus_tag=C9E97_RS11960;old_locus_tag=C9E97_12240
NZ_PYKA01000086.1	Protein Homology	CDS	24925	26289	.	-	0	ID=cds-WP_135369273.1;Parent=gene-C9E97_RS11960;Dbxref=GenBank:WP_135369273.1;Name=WP_135369273.1;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462154.1;locus_tag=C9E97_RS11960;product=L-serine ammonia-lyase;protein_id=WP_135369273.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	26359	28653	.	-	.	ID=gene-C9E97_RS11965;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=C9E97_RS11965;old_locus_tag=C9E97_12245
NZ_PYKA01000086.1	Protein Homology	CDS	26359	28653	.	-	0	ID=cds-WP_000867323.1;Parent=gene-C9E97_RS11965;Dbxref=GenBank:WP_000867323.1;Name=WP_000867323.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462155.1;locus_tag=C9E97_RS11965;product=formate C-acetyltransferase;protein_id=WP_000867323.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	28687	29895	.	-	.	ID=gene-C9E97_RS11970;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=C9E97_RS11970;old_locus_tag=C9E97_12250
NZ_PYKA01000086.1	Protein Homology	CDS	28687	29895	.	-	0	ID=cds-WP_135369272.1;Parent=gene-C9E97_RS11970;Dbxref=GenBank:WP_135369272.1;Name=WP_135369272.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462156.1;locus_tag=C9E97_RS11970;product=propionate kinase;protein_id=WP_135369272.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	29962	31293	.	-	.	ID=gene-C9E97_RS11975;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=C9E97_RS11975;old_locus_tag=C9E97_12255
NZ_PYKA01000086.1	Protein Homology	CDS	29962	31293	.	-	0	ID=cds-WP_000108129.1;Parent=gene-C9E97_RS11975;Dbxref=GenBank:WP_000108129.1;Name=WP_000108129.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=C9E97_RS11975;product=threonine/serine transporter TdcC;protein_id=WP_000108129.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	31314	32303	.	-	.	ID=gene-C9E97_RS11980;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=C9E97_RS11980;old_locus_tag=C9E97_12260
NZ_PYKA01000086.1	Protein Homology	CDS	31314	32303	.	-	0	ID=cds-WP_000548368.1;Parent=gene-C9E97_RS11980;Dbxref=GenBank:WP_000548368.1;Name=WP_000548368.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462158.1;locus_tag=C9E97_RS11980;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_000548368.1;transl_table=11
NZ_PYKA01000086.1	RefSeq	gene	32401	33339	.	-	.	ID=gene-C9E97_RS11985;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=C9E97_RS11985;old_locus_tag=C9E97_12265
NZ_PYKA01000086.1	Protein Homology	CDS	32401	33339	.	-	0	ID=cds-WP_001094907.1;Parent=gene-C9E97_RS11985;Dbxref=GenBank:WP_001094907.1;Name=WP_001094907.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462159.1;locus_tag=C9E97_RS11985;product=transcriptional regulator TdcA;protein_id=WP_001094907.1;transl_table=11
##sequence-region NZ_PYKA01000061.1 1 32744
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000061.1	RefSeq	region	1	32744	.	+	.	ID=NZ_PYKA01000061.1:1..32744;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000061.1	RefSeq	pseudogene	1	2582	.	+	.	ID=gene-C9E97_RS09155;Name=sadA;gbkey=Gene;gene=sadA;gene_biotype=pseudogene;locus_tag=C9E97_RS09155;old_locus_tag=C9E97_09345;partial=true;pseudo=true;start_range=.,1
NZ_PYKA01000061.1	Protein Homology	CDS	1	2582	.	+	2	ID=cds-C9E97_RS09155;Parent=gene-C9E97_RS09155;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=sadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462591.1;locus_tag=C9E97_RS09155;partial=true;product=trimeric autotransporter adhesin SadA;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	2881	4536	.	+	.	ID=gene-C9E97_RS09160;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=C9E97_RS09160;old_locus_tag=C9E97_09350
NZ_PYKA01000061.1	Protein Homology	CDS	2881	4536	.	+	0	ID=cds-WP_135369216.1;Parent=gene-C9E97_RS09160;Dbxref=GenBank:WP_135369216.1;Name=WP_135369216.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462592.1;locus_tag=C9E97_RS09160;product=L-lactate permease;protein_id=WP_135369216.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	4533	5309	.	+	.	ID=gene-C9E97_RS09165;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=C9E97_RS09165;old_locus_tag=C9E97_09355
NZ_PYKA01000061.1	Protein Homology	CDS	4533	5309	.	+	0	ID=cds-WP_000636696.1;Parent=gene-C9E97_RS09165;Dbxref=GenBank:WP_000636696.1;Name=WP_000636696.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462593.1;locus_tag=C9E97_RS09165;product=transcriptional regulator LldR;protein_id=WP_000636696.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	5306	6496	.	+	.	ID=gene-C9E97_RS09170;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=C9E97_RS09170;old_locus_tag=C9E97_09360
NZ_PYKA01000061.1	Protein Homology	CDS	5306	6496	.	+	0	ID=cds-WP_000586997.1;Parent=gene-C9E97_RS09170;Dbxref=GenBank:WP_000586997.1;Name=WP_000586997.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=C9E97_RS09170;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WP_000586997.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	6561	7034	.	+	.	ID=gene-C9E97_RS09175;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=C9E97_RS09175;old_locus_tag=C9E97_09365
NZ_PYKA01000061.1	Protein Homology	CDS	6561	7034	.	+	0	ID=cds-WP_000932335.1;Parent=gene-C9E97_RS09175;Dbxref=GenBank:WP_000932335.1;Name=WP_000932335.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=C9E97_RS09175;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_000932335.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	7102	8106	.	-	.	ID=gene-C9E97_RS09180;Name=C9E97_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09180;old_locus_tag=C9E97_09370
NZ_PYKA01000061.1	Protein Homology	CDS	7102	8106	.	-	0	ID=cds-WP_001537635.1;Parent=gene-C9E97_RS09180;Dbxref=GenBank:WP_001537635.1;Name=WP_001537635.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462596.1;locus_tag=C9E97_RS09180;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_001537635.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	8425	9621	.	+	.	ID=gene-C9E97_RS09185;Name=C9E97_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09185;old_locus_tag=C9E97_09380
NZ_PYKA01000061.1	Protein Homology	CDS	8425	9621	.	+	0	ID=cds-WP_001218249.1;Parent=gene-C9E97_RS09185;Dbxref=GenBank:WP_001218249.1;Name=WP_001218249.1;Ontology_term=GO:0046392,GO:1903663,GO:0008867,GO:1990594;gbkey=CDS;go_function=galactarate dehydratase activity|0008867||IEA,L-altrarate dehydratase activity|1990594||IEA;go_process=galactarate catabolic process|0046392||IEA,L-altrarate catabolic process|1903663||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462597.1;locus_tag=C9E97_RS09185;product=L-talarate/galactarate dehydratase;protein_id=WP_001218249.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	9695	11005	.	+	.	ID=gene-C9E97_RS09190;Name=C9E97_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09190;old_locus_tag=C9E97_09385
NZ_PYKA01000061.1	Protein Homology	CDS	9695	11005	.	+	0	ID=cds-WP_001092104.1;Parent=gene-C9E97_RS09190;Dbxref=GenBank:WP_001092104.1;Name=WP_001092104.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462598.1;locus_tag=C9E97_RS09190;product=MFS transporter;protein_id=WP_001092104.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	11088	11909	.	-	.	ID=gene-C9E97_RS09195;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=C9E97_RS09195;old_locus_tag=C9E97_09390
NZ_PYKA01000061.1	Protein Homology	CDS	11088	11909	.	-	0	ID=cds-WP_031605978.1;Parent=gene-C9E97_RS09195;Dbxref=GenBank:WP_031605978.1;Name=WP_031605978.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=C9E97_RS09195;product=serine O-acetyltransferase;protein_id=WP_031605978.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	11987	13006	.	-	.	ID=gene-C9E97_RS09200;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=C9E97_RS09200;old_locus_tag=C9E97_09395
NZ_PYKA01000061.1	Protein Homology	CDS	11987	13006	.	-	0	ID=cds-WP_001076596.1;Parent=gene-C9E97_RS09200;Dbxref=GenBank:WP_001076596.1;Name=WP_001076596.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462600.1;locus_tag=C9E97_RS09200;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001076596.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	13006	13473	.	-	.	ID=gene-C9E97_RS09205;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=C9E97_RS09205;old_locus_tag=C9E97_09400
NZ_PYKA01000061.1	Protein Homology	CDS	13006	13473	.	-	0	ID=cds-WP_000003370.1;Parent=gene-C9E97_RS09205;Dbxref=GenBank:WP_000003370.1;Name=WP_000003370.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=C9E97_RS09205;product=protein-export chaperone SecB;protein_id=WP_000003370.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	13517	13768	.	-	.	ID=gene-C9E97_RS09210;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=C9E97_RS09210;old_locus_tag=C9E97_09405
NZ_PYKA01000061.1	Protein Homology	CDS	13517	13768	.	-	0	ID=cds-WP_001273795.1;Parent=gene-C9E97_RS09210;Dbxref=GenBank:WP_001273795.1;Name=WP_001273795.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462602.1;locus_tag=C9E97_RS09210;product=glutaredoxin 3;protein_id=WP_001273795.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	13854	14285	.	-	.	ID=gene-C9E97_RS09215;Name=C9E97_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09215;old_locus_tag=C9E97_09410
NZ_PYKA01000061.1	Protein Homology	CDS	13854	14285	.	-	0	ID=cds-WP_001156179.1;Parent=gene-C9E97_RS09215;Dbxref=GenBank:WP_001156179.1;Name=WP_001156179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462603.1;locus_tag=C9E97_RS09215;product=rhodanese-like domain-containing protein;protein_id=WP_001156179.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	14533	16077	.	+	.	ID=gene-C9E97_RS09220;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=C9E97_RS09220;old_locus_tag=C9E97_09415
NZ_PYKA01000061.1	Protein Homology	CDS	14533	16077	.	+	0	ID=cds-WP_000116576.1;Parent=gene-C9E97_RS09220;Dbxref=GenBank:WP_000116576.1;Name=WP_000116576.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=C9E97_RS09220;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_000116576.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	16111	17370	.	+	.	ID=gene-C9E97_RS09225;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=C9E97_RS09225;old_locus_tag=C9E97_09420
NZ_PYKA01000061.1	Protein Homology	CDS	16111	17370	.	+	0	ID=cds-WP_058814511.1;Parent=gene-C9E97_RS09225;Dbxref=GenBank:WP_058814511.1;Name=WP_058814511.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=C9E97_RS09225;product=murein hydrolase activator EnvC;protein_id=WP_058814511.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	17374	18336	.	+	.	ID=gene-C9E97_RS09230;Name=C9E97_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09230;old_locus_tag=C9E97_09425
NZ_PYKA01000061.1	Protein Homology	CDS	17374	18336	.	+	0	ID=cds-WP_135369215.1;Parent=gene-C9E97_RS09230;Dbxref=GenBank:WP_135369215.1;Name=WP_135369215.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462606.1;locus_tag=C9E97_RS09230;product=divergent polysaccharide deacetylase family protein;protein_id=WP_135369215.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	18323	19357	.	-	.	ID=gene-C9E97_RS09235;Name=C9E97_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09235;old_locus_tag=C9E97_09430
NZ_PYKA01000061.1	Protein Homology	CDS	18323	19357	.	-	0	ID=cds-WP_135369214.1;Parent=gene-C9E97_RS09235;Dbxref=GenBank:WP_135369214.1;Name=WP_135369214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462607.1;locus_tag=C9E97_RS09235;product=glycosyltransferase;protein_id=WP_135369214.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	19651	20676	.	-	.	ID=gene-C9E97_RS09240;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=C9E97_RS09240;old_locus_tag=C9E97_09435
NZ_PYKA01000061.1	Protein Homology	CDS	19651	20676	.	-	0	ID=cds-WP_000645990.1;Parent=gene-C9E97_RS09240;Dbxref=GenBank:WP_000645990.1;Name=WP_000645990.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=C9E97_RS09240;product=L-threonine 3-dehydrogenase;protein_id=WP_000645990.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	20686	21882	.	-	.	ID=gene-C9E97_RS09245;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=C9E97_RS09245;old_locus_tag=C9E97_09440
NZ_PYKA01000061.1	Protein Homology	CDS	20686	21882	.	-	0	ID=cds-WP_001213790.1;Parent=gene-C9E97_RS09245;Dbxref=GenBank:WP_001213790.1;Name=WP_001213790.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=C9E97_RS09245;product=glycine C-acetyltransferase;protein_id=WP_001213790.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	22085	23017	.	+	.	ID=gene-C9E97_RS09250;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=C9E97_RS09250;old_locus_tag=C9E97_09445
NZ_PYKA01000061.1	Protein Homology	CDS	22085	23017	.	+	0	ID=cds-WP_000587771.1;Parent=gene-C9E97_RS09250;Dbxref=GenBank:WP_000587771.1;Name=WP_000587771.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=C9E97_RS09250;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_000587771.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	23020	24066	.	+	.	ID=gene-C9E97_RS09255;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=C9E97_RS09255;old_locus_tag=C9E97_09450
NZ_PYKA01000061.1	Protein Homology	CDS	23020	24066	.	+	0	ID=cds-WP_000699197.1;Parent=gene-C9E97_RS09255;Dbxref=GenBank:WP_000699197.1;Name=WP_000699197.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462611.1;locus_tag=C9E97_RS09255;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_000699197.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	24066	25019	.	+	.	ID=gene-C9E97_RS09260;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=C9E97_RS09260;old_locus_tag=C9E97_09455
NZ_PYKA01000061.1	Protein Homology	CDS	24066	25019	.	+	0	ID=cds-WP_001264614.1;Parent=gene-C9E97_RS09260;Dbxref=GenBank:WP_001264614.1;Name=WP_001264614.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462612.1;locus_tag=C9E97_RS09260;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_001264614.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	25059	26273	.	+	.	ID=gene-C9E97_RS09265;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=protein_coding;locus_tag=C9E97_RS09265;old_locus_tag=C9E97_09460
NZ_PYKA01000061.1	Protein Homology	CDS	25059	26273	.	+	0	ID=cds-WP_039590890.1;Parent=gene-C9E97_RS09265;Dbxref=GenBank:WP_039590890.1;Name=WP_039590890.1;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462613.1;locus_tag=C9E97_RS09265;product=O-antigen ligase RfaL;protein_id=WP_039590890.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	26331	27476	.	-	.	ID=gene-C9E97_RS09270;Name=C9E97_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09270;old_locus_tag=C9E97_09465
NZ_PYKA01000061.1	Protein Homology	CDS	26331	27476	.	-	0	ID=cds-WP_000591817.1;Parent=gene-C9E97_RS09270;Dbxref=GenBank:WP_000591817.1;Name=WP_000591817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462614.1;locus_tag=C9E97_RS09270;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=WP_000591817.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	27576	28385	.	-	.	ID=gene-C9E97_RS09275;Name=waaZ;gbkey=Gene;gene=waaZ;gene_biotype=protein_coding;locus_tag=C9E97_RS09275;old_locus_tag=C9E97_09470
NZ_PYKA01000061.1	Protein Homology	CDS	27576	28385	.	-	0	ID=cds-WP_080222516.1;Parent=gene-C9E97_RS09275;Dbxref=GenBank:WP_080222516.1;Name=WP_080222516.1;gbkey=CDS;gene=waaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462615.1;locus_tag=C9E97_RS09275;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;protein_id=WP_080222516.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	28535	29233	.	-	.	ID=gene-C9E97_RS09280;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=C9E97_RS09280;old_locus_tag=C9E97_09475
NZ_PYKA01000061.1	Protein Homology	CDS	28535	29233	.	-	0	ID=cds-WP_000582811.1;Parent=gene-C9E97_RS09280;Dbxref=GenBank:WP_000582811.1;Name=WP_000582811.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462616.1;locus_tag=C9E97_RS09280;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_000582811.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	29256	30269	.	-	.	ID=gene-C9E97_RS09285;Name=rfaJ;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=C9E97_RS09285;old_locus_tag=C9E97_09480
NZ_PYKA01000061.1	Protein Homology	CDS	29256	30269	.	-	0	ID=cds-WP_135420017.1;Parent=gene-C9E97_RS09285;Dbxref=GenBank:WP_135420017.1;Name=WP_135420017.1;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462617.1;locus_tag=C9E97_RS09285;product=lipopolysaccharide 1%2C2-glucosyltransferase RfaJ;protein_id=WP_135420017.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	30287	31300	.	-	.	ID=gene-C9E97_RS09290;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=C9E97_RS09290;old_locus_tag=C9E97_09485
NZ_PYKA01000061.1	Protein Homology	CDS	30287	31300	.	-	0	ID=cds-WP_000088482.1;Parent=gene-C9E97_RS09290;Dbxref=GenBank:WP_000088482.1;Name=WP_000088482.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462618.1;locus_tag=C9E97_RS09290;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WP_000088482.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	gene	31306	32385	.	-	.	ID=gene-C9E97_RS09295;Name=waaB;gbkey=Gene;gene=waaB;gene_biotype=protein_coding;gene_synonym=rfaB;locus_tag=C9E97_RS09295;old_locus_tag=C9E97_09490
NZ_PYKA01000061.1	Protein Homology	CDS	31306	32385	.	-	0	ID=cds-WP_135369083.1;Parent=gene-C9E97_RS09295;Dbxref=GenBank:WP_135369083.1;Name=WP_135369083.1;gbkey=CDS;gene=waaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462619.1;locus_tag=C9E97_RS09295;product=lipopolysaccharide 1%2C6-galactosyltransferase;protein_id=WP_135369083.1;transl_table=11
NZ_PYKA01000061.1	RefSeq	pseudogene	32503	32664	.	-	.	ID=gene-C9E97_RS09305;Name=C9E97_RS09305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS09305;old_locus_tag=C9E97_09500;partial=true;pseudo=true;start_range=.,32503
NZ_PYKA01000061.1	Protein Homology	CDS	32503	32664	.	-	0	ID=cds-C9E97_RS09305;Parent=gene-C9E97_RS09305;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280096.1;locus_tag=C9E97_RS09305;partial=true;product=glycosyltransferase family 8 protein;pseudo=true;start_range=.,32503;transl_table=11
##sequence-region NZ_PYKA01000057.1 1 32208
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000057.1	RefSeq	region	1	32208	.	+	.	ID=NZ_PYKA01000057.1:1..32208;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000057.1	RefSeq	gene	1	2552	.	+	.	ID=gene-C9E97_RS07610;Name=C9E97_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07610;old_locus_tag=C9E97_07785;partial=true;start_range=.,1
NZ_PYKA01000057.1	Protein Homology	CDS	1	2552	.	+	2	ID=cds-WP_135495711.1;Parent=gene-C9E97_RS07610;Dbxref=GenBank:WP_135495711.1;Name=WP_135495711.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044774.1;locus_tag=C9E97_RS07610;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_135495711.1;start_range=.,1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	3271	5052	.	+	.	ID=gene-C9E97_RS07615;Name=C9E97_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07615;old_locus_tag=C9E97_07790
NZ_PYKA01000057.1	Protein Homology	CDS	3271	5052	.	+	0	ID=cds-WP_135369260.1;Parent=gene-C9E97_RS07615;Dbxref=GenBank:WP_135369260.1;Name=WP_135369260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461257.1;locus_tag=C9E97_RS07615;product=vWA domain-containing protein;protein_id=WP_135369260.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	5093	6094	.	-	.	ID=gene-C9E97_RS07620;Name=C9E97_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07620;old_locus_tag=C9E97_07795
NZ_PYKA01000057.1	Protein Homology	CDS	5093	6094	.	-	0	ID=cds-WP_000368560.1;Parent=gene-C9E97_RS07620;Dbxref=GenBank:WP_000368560.1;Name=WP_000368560.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461256.1;locus_tag=C9E97_RS07620;product=chemotaxis protein;protein_id=WP_000368560.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	6160	7077	.	-	.	ID=gene-C9E97_RS07625;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=C9E97_RS07625;old_locus_tag=C9E97_07800
NZ_PYKA01000057.1	Protein Homology	CDS	6160	7077	.	-	0	ID=cds-WP_000419093.1;Parent=gene-C9E97_RS07625;Dbxref=GenBank:WP_000419093.1;Name=WP_000419093.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rbn;go_function=RNA endonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461255.1;locus_tag=C9E97_RS07625;product=ribonuclease BN;protein_id=WP_000419093.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	7138	7599	.	+	.	ID=gene-C9E97_RS07630;Name=C9E97_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07630;old_locus_tag=C9E97_07805
NZ_PYKA01000057.1	Protein Homology	CDS	7138	7599	.	+	0	ID=cds-WP_000568155.1;Parent=gene-C9E97_RS07630;Dbxref=GenBank:WP_000568155.1;Name=WP_000568155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461254.1;locus_tag=C9E97_RS07630;product=GNAT family N-acetyltransferase;protein_id=WP_000568155.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	7654	7959	.	+	.	ID=gene-C9E97_RS07635;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=C9E97_RS07635;old_locus_tag=C9E97_07810
NZ_PYKA01000057.1	Protein Homology	CDS	7654	7959	.	+	0	ID=cds-WP_001519663.1;Parent=gene-C9E97_RS07635;Dbxref=GenBank:WP_001519663.1;Name=WP_001519663.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=C9E97_RS07635;product=stress response protein ElaB;protein_id=WP_001519663.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	8060	9355	.	+	.	ID=gene-C9E97_RS07640;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=C9E97_RS07640;old_locus_tag=C9E97_07815
NZ_PYKA01000057.1	Protein Homology	CDS	8060	9355	.	+	0	ID=cds-WP_000555672.1;Parent=gene-C9E97_RS07640;Dbxref=GenBank:WP_000555672.1;Name=WP_000555672.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461252.1;locus_tag=C9E97_RS07640;product=isochorismate synthase MenF;protein_id=WP_000555672.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	9441	11111	.	+	.	ID=gene-C9E97_RS07645;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=C9E97_RS07645;old_locus_tag=C9E97_07820
NZ_PYKA01000057.1	Protein Homology	CDS	9441	11111	.	+	0	ID=cds-WP_135369261.1;Parent=gene-C9E97_RS07645;Dbxref=GenBank:WP_135369261.1;Name=WP_135369261.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461251.1;locus_tag=C9E97_RS07645;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_135369261.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	11108	11866	.	+	.	ID=gene-C9E97_RS07650;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=C9E97_RS07650;old_locus_tag=C9E97_07825
NZ_PYKA01000057.1	Protein Homology	CDS	11108	11866	.	+	0	ID=cds-WP_135369262.1;Parent=gene-C9E97_RS07650;Dbxref=GenBank:WP_135369262.1;Name=WP_135369262.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461250.1;locus_tag=C9E97_RS07650;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_135369262.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	11881	12738	.	+	.	ID=gene-C9E97_RS07655;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=C9E97_RS07655;old_locus_tag=C9E97_07830
NZ_PYKA01000057.1	Protein Homology	CDS	11881	12738	.	+	0	ID=cds-WP_000640013.1;Parent=gene-C9E97_RS07655;Dbxref=GenBank:WP_000640013.1;Name=WP_000640013.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=C9E97_RS07655;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000640013.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	12738	13700	.	+	.	ID=gene-C9E97_RS07660;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=C9E97_RS07660;old_locus_tag=C9E97_07835
NZ_PYKA01000057.1	Protein Homology	CDS	12738	13700	.	+	0	ID=cds-WP_001255557.1;Parent=gene-C9E97_RS07660;Dbxref=GenBank:WP_001255557.1;Name=WP_001255557.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461248.1;locus_tag=C9E97_RS07660;product=o-succinylbenzoate synthase;protein_id=WP_001255557.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	13697	15064	.	+	.	ID=gene-C9E97_RS07665;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=C9E97_RS07665;old_locus_tag=C9E97_07840
NZ_PYKA01000057.1	Protein Homology	CDS	13697	15064	.	+	0	ID=cds-WP_001749042.1;Parent=gene-C9E97_RS07665;Dbxref=GenBank:WP_001749042.1;Name=WP_001749042.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461247.1;locus_tag=C9E97_RS07665;product=o-succinylbenzoate--CoA ligase;protein_id=WP_001749042.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	15162	15419	.	+	.	ID=gene-C9E97_RS07670;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=C9E97_RS07670;old_locus_tag=C9E97_07845
NZ_PYKA01000057.1	Protein Homology	CDS	15162	15419	.	+	0	ID=cds-WP_000455132.1;Parent=gene-C9E97_RS07670;Dbxref=GenBank:WP_000455132.1;Name=WP_000455132.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461246.1;locus_tag=C9E97_RS07670;product=signal transduction protein PmrD;protein_id=WP_000455132.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	15414	15791	.	-	.	ID=gene-C9E97_RS07675;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=C9E97_RS07675;old_locus_tag=C9E97_07850
NZ_PYKA01000057.1	Protein Homology	CDS	15414	15791	.	-	0	ID=cds-WP_000538694.1;Parent=gene-C9E97_RS07675;Dbxref=GenBank:WP_000538694.1;Name=WP_000538694.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461245.1;locus_tag=C9E97_RS07675;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_000538694.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	15791	16126	.	-	.	ID=gene-C9E97_RS07680;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=C9E97_RS07680;old_locus_tag=C9E97_07855
NZ_PYKA01000057.1	Protein Homology	CDS	15791	16126	.	-	0	ID=cds-WP_000580688.1;Parent=gene-C9E97_RS07680;Dbxref=GenBank:WP_000580688.1;Name=WP_000580688.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461244.1;locus_tag=C9E97_RS07680;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_000580688.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	16123	17769	.	-	.	ID=gene-C9E97_RS07685;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=C9E97_RS07685;old_locus_tag=C9E97_07860
NZ_PYKA01000057.1	Protein Homology	CDS	16123	17769	.	-	0	ID=cds-WP_135369263.1;Parent=gene-C9E97_RS07685;Dbxref=GenBank:WP_135369263.1;Name=WP_135369263.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461243.1;locus_tag=C9E97_RS07685;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_135369263.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	17766	18665	.	-	.	ID=gene-C9E97_RS07690;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=C9E97_RS07690;old_locus_tag=C9E97_07865
NZ_PYKA01000057.1	Protein Homology	CDS	17766	18665	.	-	0	ID=cds-WP_000169760.1;Parent=gene-C9E97_RS07690;Dbxref=GenBank:WP_000169760.1;Name=WP_000169760.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461242.1;locus_tag=C9E97_RS07690;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_000169760.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	18662	20644	.	-	.	ID=gene-C9E97_RS07695;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=C9E97_RS07695;old_locus_tag=C9E97_07870
NZ_PYKA01000057.1	Protein Homology	CDS	18662	20644	.	-	0	ID=cds-WP_064047212.1;Parent=gene-C9E97_RS07695;Dbxref=GenBank:WP_064047212.1;Name=WP_064047212.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461241.1;locus_tag=C9E97_RS07695;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_064047212.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	20641	21624	.	-	.	ID=gene-C9E97_RS07700;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=C9E97_RS07700;old_locus_tag=C9E97_07875
NZ_PYKA01000057.1	Protein Homology	CDS	20641	21624	.	-	0	ID=cds-WP_000458893.1;Parent=gene-C9E97_RS07700;Dbxref=GenBank:WP_000458893.1;Name=WP_000458893.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461240.1;locus_tag=C9E97_RS07700;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_000458893.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	21627	22766	.	-	.	ID=gene-C9E97_RS07705;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=C9E97_RS07705;old_locus_tag=C9E97_07880
NZ_PYKA01000057.1	Protein Homology	CDS	21627	22766	.	-	0	ID=cds-WP_135369264.1;Parent=gene-C9E97_RS07705;Dbxref=GenBank:WP_135369264.1;Name=WP_135369264.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=C9E97_RS07705;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_135369264.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	23065	23670	.	+	.	ID=gene-C9E97_RS07710;Name=pmrG;gbkey=Gene;gene=pmrG;gene_biotype=protein_coding;locus_tag=C9E97_RS07710;old_locus_tag=C9E97_07885
NZ_PYKA01000057.1	Protein Homology	CDS	23065	23670	.	+	0	ID=cds-WP_000879258.1;Parent=gene-C9E97_RS07710;Dbxref=GenBank:WP_000879258.1;Name=WP_000879258.1;gbkey=CDS;gene=pmrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461238.1;locus_tag=C9E97_RS07710;product=lipopolysaccharide core heptose(II)-phosphate phosphatase PmrG;protein_id=WP_000879258.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	23715	24140	.	-	.	ID=gene-C9E97_RS07715;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=C9E97_RS07715;old_locus_tag=C9E97_07890
NZ_PYKA01000057.1	Protein Homology	CDS	23715	24140	.	-	0	ID=cds-WP_001249900.1;Parent=gene-C9E97_RS07715;Dbxref=GenBank:WP_001249900.1;Name=WP_001249900.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461237.1;locus_tag=C9E97_RS07715;product=nucleoside triphosphatase NudI;protein_id=WP_001249900.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	24419	24961	.	+	.	ID=gene-C9E97_RS07720;Name=C9E97_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07720;old_locus_tag=C9E97_07895
NZ_PYKA01000057.1	Protein Homology	CDS	24419	24961	.	+	0	ID=cds-WP_001670658.1;Parent=gene-C9E97_RS07720;Dbxref=GenBank:WP_001670658.1;Name=WP_001670658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311165.2;locus_tag=C9E97_RS07720;product=YfaZ family protein;protein_id=WP_001670658.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	25076	26272	.	+	.	ID=gene-C9E97_RS07725;Name=C9E97_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07725;old_locus_tag=C9E97_07900
NZ_PYKA01000057.1	Protein Homology	CDS	25076	26272	.	+	0	ID=cds-WP_000935683.1;Parent=gene-C9E97_RS07725;Dbxref=GenBank:WP_000935683.1;Name=WP_000935683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461235.1;locus_tag=C9E97_RS07725;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_000935683.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	26522	27304	.	+	.	ID=gene-C9E97_RS07730;Name=C9E97_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07730;old_locus_tag=C9E97_07905
NZ_PYKA01000057.1	Protein Homology	CDS	26522	27304	.	+	0	ID=cds-WP_114050950.1;Parent=gene-C9E97_RS07730;Dbxref=GenBank:WP_114050950.1;Name=WP_114050950.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461234.1;locus_tag=C9E97_RS07730;product=IclR family transcriptional regulator;protein_id=WP_114050950.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	27318	28523	.	+	.	ID=gene-C9E97_RS07735;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=protein_coding;locus_tag=C9E97_RS07735;old_locus_tag=C9E97_07910
NZ_PYKA01000057.1	Protein Homology	CDS	27318	28523	.	+	0	ID=cds-WP_001530644.1;Parent=gene-C9E97_RS07735;Dbxref=GenBank:WP_001530644.1;Name=WP_001530644.1;Ontology_term=GO:0050032;gbkey=CDS;gene=rhmD;go_function=L-rhamnonate dehydratase activity|0050032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416750.2;locus_tag=C9E97_RS07735;product=L-rhamnonate dehydratase;protein_id=WP_001530644.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	28579	29868	.	+	.	ID=gene-C9E97_RS07740;Name=C9E97_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07740;old_locus_tag=C9E97_07915
NZ_PYKA01000057.1	Protein Homology	CDS	28579	29868	.	+	0	ID=cds-WP_000028931.1;Parent=gene-C9E97_RS07740;Dbxref=GenBank:WP_000028931.1;Name=WP_000028931.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461232.1;locus_tag=C9E97_RS07740;product=MFS transporter;protein_id=WP_000028931.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	29894	30697	.	+	.	ID=gene-C9E97_RS07745;Name=yfaU;gbkey=Gene;gene=yfaU;gene_biotype=protein_coding;locus_tag=C9E97_RS07745;old_locus_tag=C9E97_07920
NZ_PYKA01000057.1	Protein Homology	CDS	29894	30697	.	+	0	ID=cds-WP_000992941.1;Parent=gene-C9E97_RS07745;Dbxref=GenBank:WP_000992941.1;Name=WP_000992941.1;gbkey=CDS;gene=yfaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461231.1;locus_tag=C9E97_RS07745;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WP_000992941.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	30703	30879	.	+	.	ID=gene-C9E97_RS07750;Name=C9E97_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07750;old_locus_tag=C9E97_07925
NZ_PYKA01000057.1	Protein Homology	CDS	30703	30879	.	+	0	ID=cds-WP_023203574.1;Parent=gene-C9E97_RS07750;Dbxref=GenBank:WP_023203574.1;Name=WP_023203574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461230.1;locus_tag=C9E97_RS07750;product=competence damage-inducible protein A;protein_id=WP_023203574.1;transl_table=11
NZ_PYKA01000057.1	RefSeq	gene	31113	32135	.	-	.	ID=gene-C9E97_RS07755;Name=sseL;gbkey=Gene;gene=sseL;gene_biotype=protein_coding;locus_tag=C9E97_RS07755;old_locus_tag=C9E97_07935
NZ_PYKA01000057.1	Protein Homology	CDS	31113	32135	.	-	0	ID=cds-WP_135420231.1;Parent=gene-C9E97_RS07755;Dbxref=GenBank:WP_135420231.1;Name=WP_135420231.1;gbkey=CDS;gene=sseL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017745.1;locus_tag=C9E97_RS07755;product=SPI-2 type III secretion system effector deubiquitinase SseL;protein_id=WP_135420231.1;transl_table=11
##sequence-region NZ_PYKA01000009.1 1 28867
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000009.1	RefSeq	region	1	28867	.	+	.	ID=NZ_PYKA01000009.1:1..28867;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000009.1	RefSeq	gene	53	841	.	+	.	ID=gene-C9E97_RS00320;Name=C9E97_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00320;old_locus_tag=C9E97_00330
NZ_PYKA01000009.1	Protein Homology	CDS	53	841	.	+	0	ID=cds-WP_135420341.1;Parent=gene-C9E97_RS00320;Dbxref=GenBank:WP_135420341.1;Name=WP_135420341.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: protein motif:HMM:NF024880.6;locus_tag=C9E97_RS00320;product=class I SAM-dependent methyltransferase;protein_id=WP_135420341.1;transl_table=11
NZ_PYKA01000009.1	RefSeq	gene	1122	2954	.	-	.	ID=gene-C9E97_RS00325;Name=C9E97_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00325;old_locus_tag=C9E97_00335
NZ_PYKA01000009.1	Protein Homology	CDS	1122	2954	.	-	0	ID=cds-WP_167850431.1;Parent=gene-C9E97_RS00325;Dbxref=GenBank:WP_167850431.1;Name=WP_167850431.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF017539.6;locus_tag=C9E97_RS00325;product=NACHT domain-containing protein;protein_id=WP_167850431.1;transl_table=11
NZ_PYKA01000009.1	RefSeq	pseudogene	3292	3615	.	+	.	ID=gene-C9E97_RS23625;Name=C9E97_RS23625;end_range=3615,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23625;partial=true;pseudo=true
NZ_PYKA01000009.1	Protein Homology	CDS	3292	3615	.	+	0	ID=cds-C9E97_RS23625;Parent=gene-C9E97_RS23625;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3615,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010340155.1;locus_tag=C9E97_RS23625;partial=true;product=integrase;pseudo=true;transl_table=11
NZ_PYKA01000009.1	RefSeq	gene	3669	4358	.	-	.	ID=gene-C9E97_RS00335;Name=C9E97_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00335;old_locus_tag=C9E97_00345
NZ_PYKA01000009.1	Protein Homology	CDS	3669	4358	.	-	0	ID=cds-WP_135369032.1;Parent=gene-C9E97_RS00335;Dbxref=GenBank:WP_135369032.1;Name=WP_135369032.1;Ontology_term=GO:0019120;gbkey=CDS;go_function=hydrolase activity%2C acting on acid halide bonds%2C in C-halide compounds|0019120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686258.1;locus_tag=C9E97_RS00335;product=haloacid dehalogenase type II;protein_id=WP_135369032.1;transl_table=11
NZ_PYKA01000009.1	RefSeq	gene	4809	6197	.	+	.	ID=gene-C9E97_RS00340;Name=C9E97_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00340;old_locus_tag=C9E97_00350
NZ_PYKA01000009.1	Protein Homology	CDS	4809	6197	.	+	0	ID=cds-WP_240776468.1;Parent=gene-C9E97_RS00340;Dbxref=GenBank:WP_240776468.1;Name=WP_240776468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211751.1;locus_tag=C9E97_RS00340;product=AAA family ATPase;protein_id=WP_240776468.1;transl_table=11
NZ_PYKA01000009.1	RefSeq	gene	6427	7047	.	-	.	ID=gene-C9E97_RS00345;Name=C9E97_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00345;old_locus_tag=C9E97_00355
NZ_PYKA01000009.1	Protein Homology	CDS	6427	7047	.	-	0	ID=cds-WP_135369030.1;Parent=gene-C9E97_RS00345;Dbxref=GenBank:WP_135369030.1;Name=WP_135369030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861012.1;locus_tag=C9E97_RS00345;product=inovirus Gp2 family protein;protein_id=WP_135369030.1;transl_table=11
NZ_PYKA01000009.1	RefSeq	gene	7281	8795	.	-	.	ID=gene-C9E97_RS00350;Name=C9E97_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00350;old_locus_tag=C9E97_00360
NZ_PYKA01000009.1	Protein Homology	CDS	7281	8795	.	-	0	ID=cds-WP_135369055.1;Parent=gene-C9E97_RS00350;Dbxref=GenBank:WP_135369055.1;Name=WP_135369055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000923662.1;locus_tag=C9E97_RS00350;product=YfjI family protein;protein_id=WP_135369055.1;transl_table=11
NZ_PYKA01000009.1	RefSeq	gene	8983	9192	.	-	.	ID=gene-C9E97_RS00355;Name=C9E97_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00355;old_locus_tag=C9E97_00365
NZ_PYKA01000009.1	Protein Homology	CDS	8983	9192	.	-	0	ID=cds-WP_135369054.1;Parent=gene-C9E97_RS00355;Dbxref=GenBank:WP_135369054.1;Name=WP_135369054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246231.1;locus_tag=C9E97_RS00355;product=AlpA family phage regulatory protein;protein_id=WP_135369054.1;transl_table=11
NZ_PYKA01000009.1	RefSeq	gene	9307	10170	.	+	.	ID=gene-C9E97_RS00360;Name=C9E97_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00360;old_locus_tag=C9E97_00370
NZ_PYKA01000009.1	GeneMarkS-2+	CDS	9307	10170	.	+	0	ID=cds-WP_135369053.1;Parent=gene-C9E97_RS00360;Dbxref=GenBank:WP_135369053.1;Name=WP_135369053.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E97_RS00360;product=hypothetical protein;protein_id=WP_135369053.1;transl_table=11
NZ_PYKA01000009.1	RefSeq	gene	10216	11457	.	-	.	ID=gene-C9E97_RS00365;Name=C9E97_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00365;old_locus_tag=C9E97_00375
NZ_PYKA01000009.1	Protein Homology	CDS	10216	11457	.	-	0	ID=cds-WP_135369052.1;Parent=gene-C9E97_RS00365;Dbxref=GenBank:WP_135369052.1;Name=WP_135369052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417111.1;locus_tag=C9E97_RS00365;product=integrase;protein_id=WP_135369052.1;transl_table=11
NZ_PYKA01000009.1	RefSeq	gene	11639	12001	.	-	.	ID=gene-C9E97_RS00370;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=C9E97_RS00370;old_locus_tag=C9E97_00380
NZ_PYKA01000009.1	cmsearch	tmRNA	11639	12001	.	-	.	ID=rna-C9E97_RS00370;Parent=gene-C9E97_RS00370;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS00370;product=transfer-messenger RNA
NZ_PYKA01000009.1	cmsearch	exon	11639	12001	.	-	.	ID=exon-C9E97_RS00370-1;Parent=rna-C9E97_RS00370;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS00370;product=transfer-messenger RNA
NZ_PYKA01000009.1	RefSeq	gene	12073	13236	.	-	.	ID=gene-C9E97_RS00375;Name=C9E97_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00375;old_locus_tag=C9E97_00385
NZ_PYKA01000009.1	Protein Homology	CDS	12073	13236	.	-	0	ID=cds-WP_012543392.1;Parent=gene-C9E97_RS00375;Dbxref=GenBank:WP_012543392.1;Name=WP_012543392.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461621.1;locus_tag=C9E97_RS00375;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_012543392.1;transl_table=11
NZ_PYKA01000009.1	RefSeq	gene	13244	15424	.	-	.	ID=gene-C9E97_RS00380;Name=C9E97_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00380;old_locus_tag=C9E97_00390
NZ_PYKA01000009.1	Protein Homology	CDS	13244	15424	.	-	0	ID=cds-WP_135369051.1;Parent=gene-C9E97_RS00380;Dbxref=GenBank:WP_135369051.1;Name=WP_135369051.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461620.1;locus_tag=C9E97_RS00380;product=type I secretion system permease/ATPase;protein_id=WP_135369051.1;transl_table=11
NZ_PYKA01000009.1	RefSeq	gene	15421	16830	.	-	.	ID=gene-C9E97_RS00385;Name=C9E97_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00385;old_locus_tag=C9E97_00395
NZ_PYKA01000009.1	Protein Homology	CDS	15421	16830	.	-	0	ID=cds-WP_000533856.1;Parent=gene-C9E97_RS00385;Dbxref=GenBank:WP_000533856.1;Name=WP_000533856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461619.1;locus_tag=C9E97_RS00385;product=TolC family outer membrane protein;protein_id=WP_000533856.1;transl_table=11
NZ_PYKA01000009.1	RefSeq	gene	16895	28369	.	-	.	ID=gene-C9E97_RS00390;Name=bapA;gbkey=Gene;gene=bapA;gene_biotype=protein_coding;locus_tag=C9E97_RS00390;old_locus_tag=C9E97_00400
NZ_PYKA01000009.1	Protein Homology	CDS	16895	28369	.	-	0	ID=cds-WP_135369050.1;Parent=gene-C9E97_RS00390;Dbxref=GenBank:WP_135369050.1;Name=WP_135369050.1;gbkey=CDS;gene=bapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237670.1;locus_tag=C9E97_RS00390;product=biofilm-associated protein BapA;protein_id=WP_135369050.1;transl_table=11
##sequence-region NZ_PYKA01000046.1 1 28258
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000046.1	RefSeq	region	1	28258	.	+	.	ID=NZ_PYKA01000046.1:1..28258;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000046.1	RefSeq	gene	192	1025	.	+	.	ID=gene-C9E97_RS06505;Name=C9E97_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06505;old_locus_tag=C9E97_06665
NZ_PYKA01000046.1	Protein Homology	CDS	192	1025	.	+	0	ID=cds-WP_001667936.1;Parent=gene-C9E97_RS06505;Dbxref=GenBank:WP_001667936.1;Name=WP_001667936.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459710.1;locus_tag=C9E97_RS06505;product=glycosyltransferase family A protein;protein_id=WP_001667936.1;transl_table=11
NZ_PYKA01000046.1	RefSeq	gene	1083	2978	.	+	.	ID=gene-C9E97_RS06510;Name=C9E97_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06510;old_locus_tag=C9E97_06670
NZ_PYKA01000046.1	Protein Homology	CDS	1083	2978	.	+	0	ID=cds-WP_135419939.1;Parent=gene-C9E97_RS06510;Dbxref=GenBank:WP_135419939.1;Name=WP_135419939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459711.1;locus_tag=C9E97_RS06510;product=HAD family hydrolase;protein_id=WP_135419939.1;transl_table=11
NZ_PYKA01000046.1	RefSeq	gene	3046	3183	.	+	.	ID=gene-C9E97_RS06515;Name=C9E97_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06515;old_locus_tag=C9E97_06675
NZ_PYKA01000046.1	Protein Homology	CDS	3046	3183	.	+	0	ID=cds-WP_001519950.1;Parent=gene-C9E97_RS06515;Dbxref=GenBank:WP_001519950.1;Name=WP_001519950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459712.1;locus_tag=C9E97_RS06515;product=hypothetical protein;protein_id=WP_001519950.1;transl_table=11
NZ_PYKA01000046.1	RefSeq	gene	3232	4023	.	+	.	ID=gene-C9E97_RS06520;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=C9E97_RS06520;old_locus_tag=C9E97_06680
NZ_PYKA01000046.1	Protein Homology	CDS	3232	4023	.	+	0	ID=cds-WP_135369771.1;Parent=gene-C9E97_RS06520;Dbxref=GenBank:WP_135369771.1;Name=WP_135369771.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459713.1;locus_tag=C9E97_RS06520;product=endonuclease VIII;protein_id=WP_135369771.1;transl_table=11
NZ_PYKA01000046.1	RefSeq	gene	4078	5124	.	-	.	ID=gene-C9E97_RS06525;Name=C9E97_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06525;old_locus_tag=C9E97_06685
NZ_PYKA01000046.1	Protein Homology	CDS	4078	5124	.	-	0	ID=cds-WP_024156732.1;Parent=gene-C9E97_RS06525;Dbxref=GenBank:WP_024156732.1;Name=WP_024156732.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459714.1;locus_tag=C9E97_RS06525;product=AbrB family transcriptional regulator;protein_id=WP_024156732.1;transl_table=11
NZ_PYKA01000046.1	RefSeq	gene	5260	6543	.	-	.	ID=gene-C9E97_RS06530;Name=C9E97_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06530;old_locus_tag=C9E97_06690
NZ_PYKA01000046.1	Protein Homology	CDS	5260	6543	.	-	0	ID=cds-WP_000785808.1;Parent=gene-C9E97_RS06530;Dbxref=GenBank:WP_000785808.1;Name=WP_000785808.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459715.1;locus_tag=C9E97_RS06530;product=citrate synthase;protein_id=WP_000785808.1;transl_table=11
NZ_PYKA01000046.1	RefSeq	gene	6769	6900	.	-	.	ID=gene-C9E97_RS24045;Name=C9E97_RS24045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS24045
NZ_PYKA01000046.1	Protein Homology	CDS	6769	6900	.	-	0	ID=cds-WP_419149719.1;Parent=gene-C9E97_RS24045;Dbxref=GenBank:WP_419149719.1;Name=WP_419149719.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049035.1;locus_tag=C9E97_RS24045;product=hypothetical protein;protein_id=WP_419149719.1;transl_table=11
NZ_PYKA01000046.1	RefSeq	gene	7283	7687	.	+	.	ID=gene-C9E97_RS06535;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=C9E97_RS06535;old_locus_tag=C9E97_06705
NZ_PYKA01000046.1	Protein Homology	CDS	7283	7687	.	+	0	ID=cds-WP_000263340.1;Parent=gene-C9E97_RS06535;Dbxref=GenBank:WP_000263340.1;Name=WP_000263340.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=C9E97_RS06535;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_000263340.1;transl_table=11
NZ_PYKA01000046.1	RefSeq	gene	7681	8028	.	+	.	ID=gene-C9E97_RS06540;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=C9E97_RS06540;old_locus_tag=C9E97_06710
NZ_PYKA01000046.1	Protein Homology	CDS	7681	8028	.	+	0	ID=cds-WP_000254356.1;Parent=gene-C9E97_RS06540;Dbxref=GenBank:WP_000254356.1;Name=WP_000254356.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=C9E97_RS06540;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_000254356.1;transl_table=11
NZ_PYKA01000046.1	RefSeq	gene	8028	9794	.	+	.	ID=gene-C9E97_RS06545;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=C9E97_RS06545;old_locus_tag=C9E97_06715
NZ_PYKA01000046.1	Protein Homology	CDS	8028	9794	.	+	0	ID=cds-WP_000775561.1;Parent=gene-C9E97_RS06545;Dbxref=GenBank:WP_000775561.1;Name=WP_000775561.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=C9E97_RS06545;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_000775561.1;transl_table=11
NZ_PYKA01000046.1	RefSeq	gene	9811	10527	.	+	.	ID=gene-C9E97_RS06550;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=C9E97_RS06550;old_locus_tag=C9E97_06720
NZ_PYKA01000046.1	Protein Homology	CDS	9811	10527	.	+	0	ID=cds-WP_001537859.1;Parent=gene-C9E97_RS06550;Dbxref=GenBank:WP_001537859.1;Name=WP_001537859.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=C9E97_RS06550;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_001537859.1;transl_table=11
NZ_PYKA01000046.1	RefSeq	gene	11051	13852	.	+	.	ID=gene-C9E97_RS06555;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=C9E97_RS06555;old_locus_tag=C9E97_06725
NZ_PYKA01000046.1	Protein Homology	CDS	11051	13852	.	+	0	ID=cds-WP_001181500.1;Parent=gene-C9E97_RS06555;Dbxref=GenBank:WP_001181500.1;Name=WP_001181500.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459721.1;locus_tag=C9E97_RS06555;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_001181500.1;transl_table=11
NZ_PYKA01000046.1	RefSeq	gene	13867	15075	.	+	.	ID=gene-C9E97_RS06560;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=C9E97_RS06560;old_locus_tag=C9E97_06730
NZ_PYKA01000046.1	Protein Homology	CDS	13867	15075	.	+	0	ID=cds-WP_000099858.1;Parent=gene-C9E97_RS06560;Dbxref=GenBank:WP_000099858.1;Name=WP_000099858.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459722.1;locus_tag=C9E97_RS06560;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_000099858.1;transl_table=11
NZ_PYKA01000046.1	RefSeq	gene	15217	16383	.	+	.	ID=gene-C9E97_RS06565;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=C9E97_RS06565;old_locus_tag=C9E97_06735
NZ_PYKA01000046.1	Protein Homology	CDS	15217	16383	.	+	0	ID=cds-WP_001048590.1;Parent=gene-C9E97_RS06565;Dbxref=GenBank:WP_001048590.1;Name=WP_001048590.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=C9E97_RS06565;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_001048590.1;transl_table=11
NZ_PYKA01000046.1	RefSeq	gene	16383	17252	.	+	.	ID=gene-C9E97_RS06570;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=C9E97_RS06570;old_locus_tag=C9E97_06740
NZ_PYKA01000046.1	Protein Homology	CDS	16383	17252	.	+	0	ID=cds-WP_000114631.1;Parent=gene-C9E97_RS06570;Dbxref=GenBank:WP_000114631.1;Name=WP_000114631.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=C9E97_RS06570;product=succinate--CoA ligase subunit alpha;protein_id=WP_000114631.1;transl_table=11
NZ_PYKA01000046.1	RefSeq	gene	18835	20403	.	+	.	ID=gene-C9E97_RS06575;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=C9E97_RS06575;old_locus_tag=C9E97_06750
NZ_PYKA01000046.1	Protein Homology	CDS	18835	20403	.	+	0	ID=cds-WP_000884369.1;Parent=gene-C9E97_RS06575;Dbxref=GenBank:WP_000884369.1;Name=WP_000884369.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459725.1;locus_tag=C9E97_RS06575;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000884369.1;transl_table=11
NZ_PYKA01000046.1	RefSeq	gene	20419	21558	.	+	.	ID=gene-C9E97_RS06580;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=C9E97_RS06580;old_locus_tag=C9E97_06755
NZ_PYKA01000046.1	Protein Homology	CDS	20419	21558	.	+	0	ID=cds-WP_000568258.1;Parent=gene-C9E97_RS06580;Dbxref=GenBank:WP_000568258.1;Name=WP_000568258.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=C9E97_RS06580;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000568258.1;transl_table=11
NZ_PYKA01000046.1	RefSeq	gene	21573	21686	.	+	.	ID=gene-C9E97_RS06585;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=C9E97_RS06585;old_locus_tag=C9E97_06760
NZ_PYKA01000046.1	Protein Homology	CDS	21573	21686	.	+	0	ID=cds-WP_000270278.1;Parent=gene-C9E97_RS06585;Dbxref=GenBank:WP_000270278.1;Name=WP_000270278.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459727.1;locus_tag=C9E97_RS06585;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_000270278.1;transl_table=11
NZ_PYKA01000046.1	RefSeq	gene	21686	21979	.	+	.	ID=gene-C9E97_RS06590;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=C9E97_RS06590;old_locus_tag=C9E97_06765
NZ_PYKA01000046.1	Protein Homology	CDS	21686	21979	.	+	0	ID=cds-WP_000148790.1;Parent=gene-C9E97_RS06590;Dbxref=GenBank:WP_000148790.1;Name=WP_000148790.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006712473.1;locus_tag=C9E97_RS06590;product=cyd operon protein YbgE;protein_id=WP_000148790.1;transl_table=11
NZ_PYKA01000046.1	RefSeq	gene	22208	22612	.	+	.	ID=gene-C9E97_RS06595;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=C9E97_RS06595;old_locus_tag=C9E97_06770
NZ_PYKA01000046.1	Protein Homology	CDS	22208	22612	.	+	0	ID=cds-WP_001046240.1;Parent=gene-C9E97_RS06595;Dbxref=GenBank:WP_001046240.1;Name=WP_001046240.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459729.1;locus_tag=C9E97_RS06595;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_001046240.1;transl_table=11
NZ_PYKA01000046.1	RefSeq	gene	22609	23301	.	+	.	ID=gene-C9E97_RS06600;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=C9E97_RS06600;old_locus_tag=C9E97_06775
NZ_PYKA01000046.1	Protein Homology	CDS	22609	23301	.	+	0	ID=cds-WP_000131318.1;Parent=gene-C9E97_RS06600;Dbxref=GenBank:WP_000131318.1;Name=WP_000131318.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459730.1;locus_tag=C9E97_RS06600;product=Tol-Pal system protein TolQ;protein_id=WP_000131318.1;transl_table=11
NZ_PYKA01000046.1	RefSeq	gene	23305	23733	.	+	.	ID=gene-C9E97_RS06605;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=C9E97_RS06605;old_locus_tag=C9E97_06780
NZ_PYKA01000046.1	Protein Homology	CDS	23305	23733	.	+	0	ID=cds-WP_000124676.1;Parent=gene-C9E97_RS06605;Dbxref=GenBank:WP_000124676.1;Name=WP_000124676.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=C9E97_RS06605;product=colicin uptake protein TolR;protein_id=WP_000124676.1;transl_table=11
NZ_PYKA01000046.1	RefSeq	gene	23798	24976	.	+	.	ID=gene-C9E97_RS06610;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=C9E97_RS06610;old_locus_tag=C9E97_06785
NZ_PYKA01000046.1	Protein Homology	CDS	23798	24976	.	+	0	ID=cds-WP_000030589.1;Parent=gene-C9E97_RS06610;Dbxref=GenBank:WP_000030589.1;Name=WP_000030589.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=C9E97_RS06610;product=cell envelope integrity protein TolA;protein_id=WP_000030589.1;transl_table=11
NZ_PYKA01000046.1	RefSeq	gene	25100	26392	.	+	.	ID=gene-C9E97_RS06615;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=C9E97_RS06615;old_locus_tag=C9E97_06790
NZ_PYKA01000046.1	Protein Homology	CDS	25100	26392	.	+	0	ID=cds-WP_001562341.1;Parent=gene-C9E97_RS06615;Dbxref=GenBank:WP_001562341.1;Name=WP_001562341.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=C9E97_RS06615;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_001562341.1;transl_table=11
NZ_PYKA01000046.1	RefSeq	gene	26427	26951	.	+	.	ID=gene-C9E97_RS06620;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=C9E97_RS06620;old_locus_tag=C9E97_06795
NZ_PYKA01000046.1	Protein Homology	CDS	26427	26951	.	+	0	ID=cds-WP_001176621.1;Parent=gene-C9E97_RS06620;Dbxref=GenBank:WP_001176621.1;Name=WP_001176621.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459734.1;locus_tag=C9E97_RS06620;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001176621.1;transl_table=11
NZ_PYKA01000046.1	RefSeq	gene	26961	27749	.	+	.	ID=gene-C9E97_RS06625;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=C9E97_RS06625;old_locus_tag=C9E97_06800
NZ_PYKA01000046.1	Protein Homology	CDS	26961	27749	.	+	0	ID=cds-WP_000097547.1;Parent=gene-C9E97_RS06625;Dbxref=GenBank:WP_000097547.1;Name=WP_000097547.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459735.1;locus_tag=C9E97_RS06625;product=cell division protein CpoB;protein_id=WP_000097547.1;transl_table=11
NZ_PYKA01000046.1	RefSeq	gene	27914	27989	.	+	.	ID=gene-C9E97_RS06630;Name=C9E97_RS06630;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS06630;old_locus_tag=C9E97_06805
NZ_PYKA01000046.1	tRNAscan-SE	tRNA	27914	27989	.	+	.	ID=rna-C9E97_RS06630;Parent=gene-C9E97_RS06630;anticodon=(pos:27947..27949);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS06630;product=tRNA-Lys
NZ_PYKA01000046.1	tRNAscan-SE	exon	27914	27989	.	+	.	ID=exon-C9E97_RS06630-1;Parent=rna-C9E97_RS06630;anticodon=(pos:27947..27949);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS06630;product=tRNA-Lys
NZ_PYKA01000046.1	RefSeq	gene	28126	28201	.	+	.	ID=gene-C9E97_RS06635;Name=C9E97_RS06635;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS06635;old_locus_tag=C9E97_06810
NZ_PYKA01000046.1	tRNAscan-SE	tRNA	28126	28201	.	+	.	ID=rna-C9E97_RS06635;Parent=gene-C9E97_RS06635;anticodon=(pos:28159..28161);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS06635;product=tRNA-Val
NZ_PYKA01000046.1	tRNAscan-SE	exon	28126	28201	.	+	.	ID=exon-C9E97_RS06635-1;Parent=rna-C9E97_RS06635;anticodon=(pos:28159..28161);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS06635;product=tRNA-Val
##sequence-region NZ_PYKA01000014.1 1 27952
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000014.1	RefSeq	region	1	27952	.	+	.	ID=NZ_PYKA01000014.1:1..27952;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000014.1	RefSeq	gene	70	144	.	-	.	ID=gene-C9E97_RS00840;Name=C9E97_RS00840;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS00840;old_locus_tag=C9E97_00855
NZ_PYKA01000014.1	tRNAscan-SE	tRNA	70	144	.	-	.	ID=rna-C9E97_RS00840;Parent=gene-C9E97_RS00840;anticodon=(pos:complement(110..112));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS00840;product=tRNA-Gln
NZ_PYKA01000014.1	tRNAscan-SE	exon	70	144	.	-	.	ID=exon-C9E97_RS00840-1;Parent=rna-C9E97_RS00840;anticodon=(pos:complement(110..112));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS00840;product=tRNA-Gln
NZ_PYKA01000014.1	RefSeq	gene	180	254	.	-	.	ID=gene-C9E97_RS00845;Name=C9E97_RS00845;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS00845;old_locus_tag=C9E97_00860
NZ_PYKA01000014.1	tRNAscan-SE	tRNA	180	254	.	-	.	ID=rna-C9E97_RS00845;Parent=gene-C9E97_RS00845;anticodon=(pos:complement(220..222));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS00845;product=tRNA-Gln
NZ_PYKA01000014.1	tRNAscan-SE	exon	180	254	.	-	.	ID=exon-C9E97_RS00845-1;Parent=rna-C9E97_RS00845;anticodon=(pos:complement(220..222));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS00845;product=tRNA-Gln
NZ_PYKA01000014.1	RefSeq	gene	278	362	.	-	.	ID=gene-C9E97_RS00850;Name=C9E97_RS00850;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS00850;old_locus_tag=C9E97_00865
NZ_PYKA01000014.1	tRNAscan-SE	tRNA	278	362	.	-	.	ID=rna-C9E97_RS00850;Parent=gene-C9E97_RS00850;anticodon=(pos:complement(326..328));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS00850;product=tRNA-Leu
NZ_PYKA01000014.1	tRNAscan-SE	exon	278	362	.	-	.	ID=exon-C9E97_RS00850-1;Parent=rna-C9E97_RS00850;anticodon=(pos:complement(326..328));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS00850;product=tRNA-Leu
NZ_PYKA01000014.1	RefSeq	gene	371	447	.	-	.	ID=gene-C9E97_RS00855;Name=C9E97_RS00855;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS00855;old_locus_tag=C9E97_00870
NZ_PYKA01000014.1	tRNAscan-SE	tRNA	371	447	.	-	.	ID=rna-C9E97_RS00855;Parent=gene-C9E97_RS00855;anticodon=(pos:complement(411..413));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS00855;product=tRNA-Met
NZ_PYKA01000014.1	tRNAscan-SE	exon	371	447	.	-	.	ID=exon-C9E97_RS00855-1;Parent=rna-C9E97_RS00855;anticodon=(pos:complement(411..413));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS00855;product=tRNA-Met
NZ_PYKA01000014.1	RefSeq	gene	669	2333	.	-	.	ID=gene-C9E97_RS00860;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=C9E97_RS00860;old_locus_tag=C9E97_00875
NZ_PYKA01000014.1	Protein Homology	CDS	669	2333	.	-	0	ID=cds-WP_135369761.1;Parent=gene-C9E97_RS00860;Dbxref=GenBank:WP_135369761.1;Name=WP_135369761.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=C9E97_RS00860;product=asparagine synthase B;protein_id=WP_135369761.1;transl_table=11
NZ_PYKA01000014.1	RefSeq	gene	2623	3375	.	-	.	ID=gene-C9E97_RS00865;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=C9E97_RS00865;old_locus_tag=C9E97_00880
NZ_PYKA01000014.1	Protein Homology	CDS	2623	3375	.	-	0	ID=cds-WP_000153143.1;Parent=gene-C9E97_RS00865;Dbxref=GenBank:WP_000153143.1;Name=WP_000153143.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373873.1;locus_tag=C9E97_RS00865;product=ribonucleotide monophosphatase NagD;protein_id=WP_000153143.1;transl_table=11
NZ_PYKA01000014.1	RefSeq	gene	3422	4642	.	-	.	ID=gene-C9E97_RS00870;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=C9E97_RS00870;old_locus_tag=C9E97_00885
NZ_PYKA01000014.1	Protein Homology	CDS	3422	4642	.	-	0	ID=cds-WP_000187578.1;Parent=gene-C9E97_RS00870;Dbxref=GenBank:WP_000187578.1;Name=WP_000187578.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459667.1;locus_tag=C9E97_RS00870;product=DNA-binding transcriptional regulator NagC;protein_id=WP_000187578.1;transl_table=11
NZ_PYKA01000014.1	RefSeq	gene	4647	5801	.	-	.	ID=gene-C9E97_RS00875;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=C9E97_RS00875;old_locus_tag=C9E97_00890
NZ_PYKA01000014.1	Protein Homology	CDS	4647	5801	.	-	0	ID=cds-WP_000271186.1;Parent=gene-C9E97_RS00875;Dbxref=GenBank:WP_000271186.1;Name=WP_000271186.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459668.1;locus_tag=C9E97_RS00875;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_000271186.1;transl_table=11
NZ_PYKA01000014.1	RefSeq	gene	5861	6661	.	-	.	ID=gene-C9E97_RS00880;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=C9E97_RS00880;old_locus_tag=C9E97_00895
NZ_PYKA01000014.1	Protein Homology	CDS	5861	6661	.	-	0	ID=cds-WP_001237059.1;Parent=gene-C9E97_RS00880;Dbxref=GenBank:WP_001237059.1;Name=WP_001237059.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=C9E97_RS00880;product=glucosamine-6-phosphate deaminase;protein_id=WP_001237059.1;transl_table=11
NZ_PYKA01000014.1	RefSeq	gene	6988	8940	.	+	.	ID=gene-C9E97_RS00885;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=C9E97_RS00885;old_locus_tag=C9E97_00900
NZ_PYKA01000014.1	Protein Homology	CDS	6988	8940	.	+	0	ID=cds-WP_135369760.1;Parent=gene-C9E97_RS00885;Dbxref=GenBank:WP_135369760.1;Name=WP_135369760.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459670.1;locus_tag=C9E97_RS00885;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_135369760.1;transl_table=11
NZ_PYKA01000014.1	RefSeq	gene	9151	10818	.	+	.	ID=gene-C9E97_RS00890;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=C9E97_RS00890;old_locus_tag=C9E97_00905
NZ_PYKA01000014.1	Protein Homology	CDS	9151	10818	.	+	0	ID=cds-WP_001287181.1;Parent=gene-C9E97_RS00890;Dbxref=GenBank:WP_001287181.1;Name=WP_001287181.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459671.1;locus_tag=C9E97_RS00890;product=glutamine--tRNA ligase;protein_id=WP_001287181.1;transl_table=11
NZ_PYKA01000014.1	RefSeq	gene	11270	12676	.	+	.	ID=gene-C9E97_RS00895;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=C9E97_RS00895;old_locus_tag=C9E97_00915
NZ_PYKA01000014.1	Protein Homology	CDS	11270	12676	.	+	0	ID=cds-WP_001258803.1;Parent=gene-C9E97_RS00895;Dbxref=GenBank:WP_001258803.1;Name=WP_001258803.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459672.1;locus_tag=C9E97_RS00895;product=chitoporin ChiP;protein_id=WP_001258803.1;transl_table=11
NZ_PYKA01000014.1	RefSeq	gene	12726	13058	.	+	.	ID=gene-C9E97_RS00900;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=C9E97_RS00900;old_locus_tag=C9E97_00920
NZ_PYKA01000014.1	Protein Homology	CDS	12726	13058	.	+	0	ID=cds-WP_000722258.1;Parent=gene-C9E97_RS00900;Dbxref=GenBank:WP_000722258.1;Name=WP_000722258.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459673.1;locus_tag=C9E97_RS00900;product=ChiQ/YbfN family lipoprotein;protein_id=WP_000722258.1;transl_table=11
NZ_PYKA01000014.1	RefSeq	gene	13107	14411	.	-	.	ID=gene-C9E97_RS00905;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=C9E97_RS00905;old_locus_tag=C9E97_00925
NZ_PYKA01000014.1	Protein Homology	CDS	13107	14411	.	-	0	ID=cds-WP_023258592.1;Parent=gene-C9E97_RS00905;Dbxref=GenBank:WP_023258592.1;Name=WP_023258592.1;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459674.1;locus_tag=C9E97_RS00905;product=tricarballylate/proton symporter TcuC;protein_id=WP_023258592.1;transl_table=11
NZ_PYKA01000014.1	RefSeq	gene	14462	15601	.	-	.	ID=gene-C9E97_RS00910;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=C9E97_RS00910;old_locus_tag=C9E97_00930
NZ_PYKA01000014.1	Protein Homology	CDS	14462	15601	.	-	0	ID=cds-WP_000811134.1;Parent=gene-C9E97_RS00910;Dbxref=GenBank:WP_000811134.1;Name=WP_000811134.1;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459675.1;locus_tag=C9E97_RS00910;product=tricarballylate utilization protein TcuB;protein_id=WP_000811134.1;transl_table=11
NZ_PYKA01000014.1	RefSeq	gene	15588	16991	.	-	.	ID=gene-C9E97_RS00915;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=C9E97_RS00915;old_locus_tag=C9E97_00935
NZ_PYKA01000014.1	Protein Homology	CDS	15588	16991	.	-	0	ID=cds-WP_000228705.1;Parent=gene-C9E97_RS00915;Dbxref=GenBank:WP_000228705.1;Name=WP_000228705.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459676.1;locus_tag=C9E97_RS00915;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=WP_000228705.1;transl_table=11
NZ_PYKA01000014.1	RefSeq	gene	17089	18015	.	-	.	ID=gene-C9E97_RS00920;Name=tcuR;gbkey=Gene;gene=tcuR;gene_biotype=protein_coding;locus_tag=C9E97_RS00920;old_locus_tag=C9E97_00940
NZ_PYKA01000014.1	Protein Homology	CDS	17089	18015	.	-	0	ID=cds-WP_000423365.1;Parent=gene-C9E97_RS00920;Dbxref=GenBank:WP_000423365.1;Name=WP_000423365.1;gbkey=CDS;gene=tcuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459677.1;locus_tag=C9E97_RS00920;product=tricarballylate utilization LysR family transcriptional regulator TcuR;protein_id=WP_000423365.1;transl_table=11
NZ_PYKA01000014.1	RefSeq	gene	18130	18582	.	-	.	ID=gene-C9E97_RS00925;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=C9E97_RS00925;old_locus_tag=C9E97_00945
NZ_PYKA01000014.1	Protein Homology	CDS	18130	18582	.	-	0	ID=cds-WP_000131699.1;Parent=gene-C9E97_RS00925;Dbxref=GenBank:WP_000131699.1;Name=WP_000131699.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459678.1;locus_tag=C9E97_RS00925;product=ferric iron uptake transcriptional regulator;protein_id=WP_000131699.1;transl_table=11
NZ_PYKA01000014.1	RefSeq	pseudogene	18575	18660	.	-	.	ID=gene-C9E97_RS23535;Name=C9E97_RS23535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23535;pseudo=true
NZ_PYKA01000014.1	Protein Homology	CDS	18575	18660	.	-	0	ID=cds-C9E97_RS23535;Parent=gene-C9E97_RS23535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=C9E97_RS23535;product=fur leader peptide;pseudo=true;transl_table=11
NZ_PYKA01000014.1	RefSeq	gene	18864	19394	.	-	.	ID=gene-C9E97_RS00930;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=C9E97_RS00930;old_locus_tag=C9E97_00950
NZ_PYKA01000014.1	Protein Homology	CDS	18864	19394	.	-	0	ID=cds-WP_001018621.1;Parent=gene-C9E97_RS00930;Dbxref=GenBank:WP_001018621.1;Name=WP_001018621.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459679.1;locus_tag=C9E97_RS00930;product=flavodoxin FldA;protein_id=WP_001018621.1;transl_table=11
NZ_PYKA01000014.1	RefSeq	gene	19545	19838	.	-	.	ID=gene-C9E97_RS00935;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=C9E97_RS00935;old_locus_tag=C9E97_00955
NZ_PYKA01000014.1	Protein Homology	CDS	19545	19838	.	-	0	ID=cds-WP_001040939.1;Parent=gene-C9E97_RS00935;Dbxref=GenBank:WP_001040939.1;Name=WP_001040939.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459680.1;locus_tag=C9E97_RS00935;product=LexA regulated protein;protein_id=WP_001040939.1;transl_table=11
NZ_PYKA01000014.1	RefSeq	gene	19972	20742	.	-	.	ID=gene-C9E97_RS00940;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=C9E97_RS00940;old_locus_tag=C9E97_00960
NZ_PYKA01000014.1	Protein Homology	CDS	19972	20742	.	-	0	ID=cds-WP_000773245.1;Parent=gene-C9E97_RS00940;Dbxref=GenBank:WP_000773245.1;Name=WP_000773245.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459681.1;locus_tag=C9E97_RS00940;product=esterase;protein_id=WP_000773245.1;transl_table=11
NZ_PYKA01000014.1	RefSeq	gene	20927	21469	.	+	.	ID=gene-C9E97_RS00945;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=C9E97_RS00945;old_locus_tag=C9E97_00965
NZ_PYKA01000014.1	Protein Homology	CDS	20927	21469	.	+	0	ID=cds-WP_000848395.1;Parent=gene-C9E97_RS00945;Dbxref=GenBank:WP_000848395.1;Name=WP_000848395.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459682.1;locus_tag=C9E97_RS00945;product=replication initiation negative regulator SeqA;protein_id=WP_000848395.1;transl_table=11
NZ_PYKA01000014.1	RefSeq	gene	21494	23134	.	+	.	ID=gene-C9E97_RS00950;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=C9E97_RS00950;old_locus_tag=C9E97_00970
NZ_PYKA01000014.1	Protein Homology	CDS	21494	23134	.	+	0	ID=cds-WP_000974385.1;Parent=gene-C9E97_RS00950;Dbxref=GenBank:WP_000974385.1;Name=WP_000974385.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459683.1;locus_tag=C9E97_RS00950;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_000974385.1;transl_table=11
NZ_PYKA01000014.1	RefSeq	gene	23249	23734	.	-	.	ID=gene-C9E97_RS00955;Name=C9E97_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00955;old_locus_tag=C9E97_00975
NZ_PYKA01000014.1	Protein Homology	CDS	23249	23734	.	-	0	ID=cds-WP_000070052.1;Parent=gene-C9E97_RS00955;Dbxref=GenBank:WP_000070052.1;Name=WP_000070052.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459684.1;locus_tag=C9E97_RS00955;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_000070052.1;transl_table=11
NZ_PYKA01000014.1	RefSeq	gene	23799	25118	.	-	.	ID=gene-C9E97_RS00960;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=C9E97_RS00960;old_locus_tag=C9E97_00980
NZ_PYKA01000014.1	Protein Homology	CDS	23799	25118	.	-	0	ID=cds-WP_135369759.1;Parent=gene-C9E97_RS00960;Dbxref=GenBank:WP_135369759.1;Name=WP_135369759.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459685.1;locus_tag=C9E97_RS00960;product=putrescine-ornithine antiporter;protein_id=WP_135369759.1;transl_table=11
NZ_PYKA01000014.1	RefSeq	gene	25115	27313	.	-	.	ID=gene-C9E97_RS00965;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=C9E97_RS00965;old_locus_tag=C9E97_00985
NZ_PYKA01000014.1	Protein Homology	CDS	25115	27313	.	-	0	ID=cds-WP_001292402.1;Parent=gene-C9E97_RS00965;Dbxref=GenBank:WP_001292402.1;Name=WP_001292402.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=C9E97_RS00965;product=ornithine decarboxylase SpeF;protein_id=WP_001292402.1;transl_table=11
NZ_PYKA01000014.1	RefSeq	gene	27693	27797	.	-	.	ID=gene-C9E97_RS00970;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=C9E97_RS00970
NZ_PYKA01000014.1	Protein Homology	CDS	27693	27797	.	-	0	ID=cds-WP_015632840.1;Parent=gene-C9E97_RS00970;Dbxref=GenBank:WP_015632840.1;Name=WP_015632840.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=C9E97_RS00970;product=leader peptide SpeFL;protein_id=WP_015632840.1;transl_table=11
##sequence-region NZ_PYKA01000020.1 1 149775
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000020.1	RefSeq	region	1	149775	.	+	.	ID=NZ_PYKA01000020.1:1..149775;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000020.1	RefSeq	gene	50	1003	.	+	.	ID=gene-C9E97_RS01270;Name=C9E97_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01270;old_locus_tag=C9E97_01290
NZ_PYKA01000020.1	Protein Homology	CDS	50	1003	.	+	0	ID=cds-WP_001282817.1;Parent=gene-C9E97_RS01270;Dbxref=GenBank:WP_001282817.1;Name=WP_001282817.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459626.1;locus_tag=C9E97_RS01270;product=YbeF family transcriptional regulator;protein_id=WP_001282817.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	1209	2174	.	+	.	ID=gene-C9E97_RS01275;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=C9E97_RS01275;old_locus_tag=C9E97_01295
NZ_PYKA01000020.1	Protein Homology	CDS	1209	2174	.	+	0	ID=cds-WP_000042640.1;Parent=gene-C9E97_RS01275;Dbxref=GenBank:WP_000042640.1;Name=WP_000042640.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=C9E97_RS01275;product=lipoyl synthase;protein_id=WP_000042640.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	2260	2463	.	-	.	ID=gene-C9E97_RS01280;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=C9E97_RS01280;old_locus_tag=C9E97_01300
NZ_PYKA01000020.1	Protein Homology	CDS	2260	2463	.	-	0	ID=cds-WP_000503938.1;Parent=gene-C9E97_RS01280;Dbxref=GenBank:WP_000503938.1;Name=WP_000503938.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459624.1;locus_tag=C9E97_RS01280;product=twin-arginine translocase subunit TatE;protein_id=WP_000503938.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	2592	3380	.	-	.	ID=gene-C9E97_RS01285;Name=C9E97_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01285;old_locus_tag=C9E97_01305
NZ_PYKA01000020.1	Protein Homology	CDS	2592	3380	.	-	0	ID=cds-WP_000495776.1;Parent=gene-C9E97_RS01285;Dbxref=GenBank:WP_000495776.1;Name=WP_000495776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459623.1;locus_tag=C9E97_RS01285;product=deaminated glutathione amidase;protein_id=WP_000495776.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	3471	3854	.	+	.	ID=gene-C9E97_RS01290;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=C9E97_RS01290;old_locus_tag=C9E97_01310
NZ_PYKA01000020.1	Protein Homology	CDS	3471	3854	.	+	0	ID=cds-WP_000939753.1;Parent=gene-C9E97_RS01290;Dbxref=GenBank:WP_000939753.1;Name=WP_000939753.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459622.1;locus_tag=C9E97_RS01290;product=fluoride efflux transporter CrcB;protein_id=WP_000939753.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	3912	4121	.	-	.	ID=gene-C9E97_RS01295;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=C9E97_RS01295;old_locus_tag=C9E97_01315
NZ_PYKA01000020.1	Protein Homology	CDS	3912	4121	.	-	0	ID=cds-WP_000034826.1;Parent=gene-C9E97_RS01295;Dbxref=GenBank:WP_000034826.1;Name=WP_000034826.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459621.1;locus_tag=C9E97_RS01295;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000034826.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	4309	4881	.	-	.	ID=gene-C9E97_RS01300;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=C9E97_RS01300;old_locus_tag=C9E97_01320
NZ_PYKA01000020.1	Protein Homology	CDS	4309	4881	.	-	0	ID=cds-WP_001623090.1;Parent=gene-C9E97_RS01300;Dbxref=GenBank:WP_001623090.1;Name=WP_001623090.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459620.1;locus_tag=C9E97_RS01300;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_001623090.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	5260	6645	.	+	.	ID=gene-C9E97_RS01305;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=C9E97_RS01305;old_locus_tag=C9E97_01330
NZ_PYKA01000020.1	Protein Homology	CDS	5260	6645	.	+	0	ID=cds-WP_000958619.1;Parent=gene-C9E97_RS01305;Dbxref=GenBank:WP_000958619.1;Name=WP_000958619.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459619.1;locus_tag=C9E97_RS01305;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000958619.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	6699	7379	.	-	.	ID=gene-C9E97_RS01310;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=C9E97_RS01310;old_locus_tag=C9E97_01335
NZ_PYKA01000020.1	Protein Homology	CDS	6699	7379	.	-	0	ID=cds-WP_000138788.1;Parent=gene-C9E97_RS01310;Dbxref=GenBank:WP_000138788.1;Name=WP_000138788.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459618.1;locus_tag=C9E97_RS01310;product=two-component response regulator DpiA;protein_id=WP_000138788.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	7348	9009	.	-	.	ID=gene-C9E97_RS01315;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=C9E97_RS01315;old_locus_tag=C9E97_01340
NZ_PYKA01000020.1	Protein Homology	CDS	7348	9009	.	-	0	ID=cds-WP_001277836.1;Parent=gene-C9E97_RS01315;Dbxref=GenBank:WP_001277836.1;Name=WP_001277836.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459617.1;locus_tag=C9E97_RS01315;product=sensor histidine kinase DpiB;protein_id=WP_001277836.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	9394	10470	.	+	.	ID=gene-C9E97_RS01320;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=C9E97_RS01320;old_locus_tag=C9E97_01350
NZ_PYKA01000020.1	Protein Homology	CDS	9394	10470	.	+	0	ID=cds-WP_000467874.1;Parent=gene-C9E97_RS01320;Dbxref=GenBank:WP_000467874.1;Name=WP_000467874.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459616.1;locus_tag=C9E97_RS01320;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_000467874.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	10467	10763	.	+	.	ID=gene-C9E97_RS01325;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=C9E97_RS01325;old_locus_tag=C9E97_01355
NZ_PYKA01000020.1	Protein Homology	CDS	10467	10763	.	+	0	ID=cds-WP_000700679.1;Parent=gene-C9E97_RS01325;Dbxref=GenBank:WP_000700679.1;Name=WP_000700679.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459615.1;locus_tag=C9E97_RS01325;product=citrate lyase acyl carrier protein;protein_id=WP_000700679.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	10760	11668	.	+	.	ID=gene-C9E97_RS01330;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=C9E97_RS01330;old_locus_tag=C9E97_01360
NZ_PYKA01000020.1	Protein Homology	CDS	10760	11668	.	+	0	ID=cds-WP_000622350.1;Parent=gene-C9E97_RS01330;Dbxref=GenBank:WP_000622350.1;Name=WP_000622350.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459614.1;locus_tag=C9E97_RS01330;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_000622350.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	11678	13207	.	+	.	ID=gene-C9E97_RS01335;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=C9E97_RS01335;old_locus_tag=C9E97_01365
NZ_PYKA01000020.1	Protein Homology	CDS	11678	13207	.	+	0	ID=cds-WP_052932426.1;Parent=gene-C9E97_RS01335;Dbxref=GenBank:WP_052932426.1;Name=WP_052932426.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459613.1;locus_tag=C9E97_RS01335;product=citrate lyase subunit alpha;protein_id=WP_052932426.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	13211	13762	.	+	.	ID=gene-C9E97_RS01340;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=C9E97_RS01340;old_locus_tag=C9E97_01370
NZ_PYKA01000020.1	Protein Homology	CDS	13211	13762	.	+	0	ID=cds-WP_135369418.1;Parent=gene-C9E97_RS01340;Dbxref=GenBank:WP_135369418.1;Name=WP_135369418.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459612.1;locus_tag=C9E97_RS01340;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_135369418.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	13734	14630	.	+	.	ID=gene-C9E97_RS01345;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=C9E97_RS01345;old_locus_tag=C9E97_01375
NZ_PYKA01000020.1	Protein Homology	CDS	13734	14630	.	+	0	ID=cds-WP_000982655.1;Parent=gene-C9E97_RS01345;Dbxref=GenBank:WP_000982655.1;Name=WP_000982655.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459611.1;locus_tag=C9E97_RS01345;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_000982655.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	14668	16131	.	+	.	ID=gene-C9E97_RS01350;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=C9E97_RS01350;old_locus_tag=C9E97_01380
NZ_PYKA01000020.1	Protein Homology	CDS	14668	16131	.	+	0	ID=cds-WP_000059029.1;Parent=gene-C9E97_RS01350;Dbxref=GenBank:WP_000059029.1;Name=WP_000059029.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459610.1;locus_tag=C9E97_RS01350;product=citrate/succinate antiporter CitT;protein_id=WP_000059029.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	16241	17047	.	+	.	ID=gene-C9E97_RS01355;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=C9E97_RS01355;old_locus_tag=C9E97_01385
NZ_PYKA01000020.1	Protein Homology	CDS	16241	17047	.	+	0	ID=cds-WP_135369417.1;Parent=gene-C9E97_RS01355;Dbxref=GenBank:WP_135369417.1;Name=WP_135369417.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459609.1;locus_tag=C9E97_RS01355;product=ribonuclease I;protein_id=WP_135369417.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	17282	17692	.	+	.	ID=gene-C9E97_RS01360;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=C9E97_RS01360;old_locus_tag=C9E97_01395
NZ_PYKA01000020.1	Protein Homology	CDS	17282	17692	.	+	0	ID=cds-WP_000089748.1;Parent=gene-C9E97_RS01360;Dbxref=GenBank:WP_000089748.1;Name=WP_000089748.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459608.1;locus_tag=C9E97_RS01360;product=nucleoside diphosphate kinase regulator;protein_id=WP_000089748.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	17775	19013	.	-	.	ID=gene-C9E97_RS01365;Name=C9E97_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01365;old_locus_tag=C9E97_01400
NZ_PYKA01000020.1	Protein Homology	CDS	17775	19013	.	-	0	ID=cds-WP_000646115.1;Parent=gene-C9E97_RS01365;Dbxref=GenBank:WP_000646115.1;Name=WP_000646115.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459607.1;locus_tag=C9E97_RS01365;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_000646115.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	19236	19664	.	+	.	ID=gene-C9E97_RS01370;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=C9E97_RS01370;old_locus_tag=C9E97_01405
NZ_PYKA01000020.1	Protein Homology	CDS	19236	19664	.	+	0	ID=cds-WP_000278499.1;Parent=gene-C9E97_RS01370;Dbxref=GenBank:WP_000278499.1;Name=WP_000278499.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459606.1;locus_tag=C9E97_RS01370;product=universal stress protein UspG;protein_id=WP_000278499.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	19732	20499	.	-	.	ID=gene-C9E97_RS01375;Name=C9E97_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01375;old_locus_tag=C9E97_01410
NZ_PYKA01000020.1	Protein Homology	CDS	19732	20499	.	-	0	ID=cds-WP_000417096.1;Parent=gene-C9E97_RS01375;Dbxref=GenBank:WP_000417096.1;Name=WP_000417096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459605.1;locus_tag=C9E97_RS01375;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000417096.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	20499	21056	.	-	.	ID=gene-C9E97_RS01380;Name=C9E97_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01380;old_locus_tag=C9E97_01415
NZ_PYKA01000020.1	Protein Homology	CDS	20499	21056	.	-	0	ID=cds-WP_001250381.1;Parent=gene-C9E97_RS01380;Dbxref=GenBank:WP_001250381.1;Name=WP_001250381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459604.1;locus_tag=C9E97_RS01380;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001250381.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	21053	23332	.	-	.	ID=gene-C9E97_RS01385;Name=C9E97_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01385;old_locus_tag=C9E97_01420
NZ_PYKA01000020.1	Protein Homology	CDS	21053	23332	.	-	0	ID=cds-WP_135369416.1;Parent=gene-C9E97_RS01385;Dbxref=GenBank:WP_135369416.1;Name=WP_135369416.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459603.1;locus_tag=C9E97_RS01385;product=molybdopterin-dependent oxidoreductase;protein_id=WP_135369416.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	23325	23885	.	-	.	ID=gene-C9E97_RS01390;Name=C9E97_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01390;old_locus_tag=C9E97_01425
NZ_PYKA01000020.1	Protein Homology	CDS	23325	23885	.	-	0	ID=cds-WP_001523344.1;Parent=gene-C9E97_RS01390;Dbxref=GenBank:WP_001523344.1;Name=WP_001523344.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459602.1;locus_tag=C9E97_RS01390;product=TorD/DmsD family molecular chaperone;protein_id=WP_001523344.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	24218	25783	.	-	.	ID=gene-C9E97_RS01395;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=C9E97_RS01395;old_locus_tag=C9E97_01430
NZ_PYKA01000020.1	Protein Homology	CDS	24218	25783	.	-	0	ID=cds-WP_000887644.1;Parent=gene-C9E97_RS01395;Dbxref=GenBank:WP_000887644.1;Name=WP_000887644.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459601.1;locus_tag=C9E97_RS01395;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000887644.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	26025	26588	.	-	.	ID=gene-C9E97_RS01400;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=C9E97_RS01400;old_locus_tag=C9E97_01435
NZ_PYKA01000020.1	Protein Homology	CDS	26025	26588	.	-	0	ID=cds-WP_000052802.1;Parent=gene-C9E97_RS01400;Dbxref=GenBank:WP_000052802.1;Name=WP_000052802.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=C9E97_RS01400;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052802.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	27029	27775	.	+	.	ID=gene-C9E97_RS01405;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=C9E97_RS01405;old_locus_tag=C9E97_01440
NZ_PYKA01000020.1	Protein Homology	CDS	27029	27775	.	+	0	ID=cds-WP_135369415.1;Parent=gene-C9E97_RS01405;Dbxref=GenBank:WP_135369415.1;Name=WP_135369415.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459599.1;locus_tag=C9E97_RS01405;product=thiol:disulfide interchange protein DsbG;protein_id=WP_135369415.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	28092	28994	.	+	.	ID=gene-C9E97_RS01410;Name=citR;gbkey=Gene;gene=citR;gene_biotype=protein_coding;gene_synonym=ybdO;locus_tag=C9E97_RS01410;old_locus_tag=C9E97_01450
NZ_PYKA01000020.1	Protein Homology	CDS	28092	28994	.	+	0	ID=cds-WP_050068253.1;Parent=gene-C9E97_RS01410;Dbxref=GenBank:WP_050068253.1;Name=WP_050068253.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=citR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459598.1;locus_tag=C9E97_RS01410;product=DNA-binding transcriptional repressor CitR;protein_id=WP_050068253.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	29160	30395	.	+	.	ID=gene-C9E97_RS01415;Name=C9E97_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01415;old_locus_tag=C9E97_01455
NZ_PYKA01000020.1	Protein Homology	CDS	29160	30395	.	+	0	ID=cds-WP_080150858.1;Parent=gene-C9E97_RS01415;Dbxref=GenBank:WP_080150858.1;Name=WP_080150858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459597.1;locus_tag=C9E97_RS01415;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_080150858.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	30368	30985	.	+	.	ID=gene-C9E97_RS01420;Name=C9E97_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01420;old_locus_tag=C9E97_01460
NZ_PYKA01000020.1	Protein Homology	CDS	30368	30985	.	+	0	ID=cds-WP_001164756.1;Parent=gene-C9E97_RS01420;Dbxref=GenBank:WP_001164756.1;Name=WP_001164756.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459596.1;locus_tag=C9E97_RS01420;product=IbrB-like domain-containing protein;protein_id=WP_001164756.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	30986	32146	.	-	.	ID=gene-C9E97_RS01425;Name=C9E97_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01425;old_locus_tag=C9E97_01465
NZ_PYKA01000020.1	Protein Homology	CDS	30986	32146	.	-	0	ID=cds-WP_135369414.1;Parent=gene-C9E97_RS01425;Dbxref=GenBank:WP_135369414.1;Name=WP_135369414.1;Ontology_term=GO:0008483,GO:0016740;gbkey=CDS;go_function=transaminase activity|0008483||IEA,transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459595.1;locus_tag=C9E97_RS01425;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_135369414.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	32273	33361	.	+	.	ID=gene-C9E97_RS01430;Name=C9E97_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01430;old_locus_tag=C9E97_01470
NZ_PYKA01000020.1	Protein Homology	CDS	32273	33361	.	+	0	ID=cds-WP_001016849.1;Parent=gene-C9E97_RS01430;Dbxref=GenBank:WP_001016849.1;Name=WP_001016849.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459594.1;locus_tag=C9E97_RS01430;product=oxidoreductase;protein_id=WP_001016849.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	33397	33594	.	-	.	ID=gene-C9E97_RS01435;Name=C9E97_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01435;old_locus_tag=C9E97_01475
NZ_PYKA01000020.1	Protein Homology	CDS	33397	33594	.	-	0	ID=cds-WP_000460619.1;Parent=gene-C9E97_RS01435;Dbxref=GenBank:WP_000460619.1;Name=WP_000460619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=C9E97_RS01435;product=YbdD/YjiX family protein;protein_id=WP_000460619.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	33658	35763	.	-	.	ID=gene-C9E97_RS01440;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=C9E97_RS01440;old_locus_tag=C9E97_01480
NZ_PYKA01000020.1	Protein Homology	CDS	33658	35763	.	-	0	ID=cds-WP_001043108.1;Parent=gene-C9E97_RS01440;Dbxref=GenBank:WP_001043108.1;Name=WP_001043108.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459592.1;locus_tag=C9E97_RS01440;product=pyruvate/proton symporter CstA;protein_id=WP_001043108.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	35945	36358	.	-	.	ID=gene-C9E97_RS01445;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=C9E97_RS01445;old_locus_tag=C9E97_01485
NZ_PYKA01000020.1	Protein Homology	CDS	35945	36358	.	-	0	ID=cds-WP_000637966.1;Parent=gene-C9E97_RS01445;Dbxref=GenBank:WP_000637966.1;Name=WP_000637966.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459591.1;locus_tag=C9E97_RS01445;product=proofreading thioesterase EntH;protein_id=WP_000637966.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	36361	37116	.	-	.	ID=gene-C9E97_RS01450;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=C9E97_RS01450;old_locus_tag=C9E97_01490
NZ_PYKA01000020.1	Protein Homology	CDS	36361	37116	.	-	0	ID=cds-WP_135369413.1;Parent=gene-C9E97_RS01450;Dbxref=GenBank:WP_135369413.1;Name=WP_135369413.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459590.1;locus_tag=C9E97_RS01450;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_135369413.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	37116	37973	.	-	.	ID=gene-C9E97_RS01455;Name=C9E97_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01455;old_locus_tag=C9E97_01495
NZ_PYKA01000020.1	Protein Homology	CDS	37116	37973	.	-	0	ID=cds-WP_001007166.1;Parent=gene-C9E97_RS01455;Dbxref=GenBank:WP_001007166.1;Name=WP_001007166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459589.1;locus_tag=C9E97_RS01455;product=isochorismatase;protein_id=WP_001007166.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	37987	39597	.	-	.	ID=gene-C9E97_RS01460;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=C9E97_RS01460;old_locus_tag=C9E97_01500
NZ_PYKA01000020.1	Protein Homology	CDS	37987	39597	.	-	0	ID=cds-WP_135369419.1;Parent=gene-C9E97_RS01460;Dbxref=GenBank:WP_135369419.1;Name=WP_135369419.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459588.1;locus_tag=C9E97_RS01460;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_135369419.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	39607	40782	.	-	.	ID=gene-C9E97_RS01465;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=C9E97_RS01465;old_locus_tag=C9E97_01505
NZ_PYKA01000020.1	Protein Homology	CDS	39607	40782	.	-	0	ID=cds-WP_000367596.1;Parent=gene-C9E97_RS01465;Dbxref=GenBank:WP_000367596.1;Name=WP_000367596.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=C9E97_RS01465;product=isochorismate synthase EntC;protein_id=WP_000367596.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	41090	42046	.	+	.	ID=gene-C9E97_RS01470;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=C9E97_RS01470;old_locus_tag=C9E97_01510
NZ_PYKA01000020.1	Protein Homology	CDS	41090	42046	.	+	0	ID=cds-WP_001238985.1;Parent=gene-C9E97_RS01470;Dbxref=GenBank:WP_001238985.1;Name=WP_001238985.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459586.1;locus_tag=C9E97_RS01470;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_001238985.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	42109	43353	.	-	.	ID=gene-C9E97_RS01475;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=C9E97_RS01475;old_locus_tag=C9E97_01515
NZ_PYKA01000020.1	Protein Homology	CDS	42109	43353	.	-	0	ID=cds-WP_001081661.1;Parent=gene-C9E97_RS01475;Dbxref=GenBank:WP_001081661.1;Name=WP_001081661.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459585.1;locus_tag=C9E97_RS01475;product=enterobactin transporter EntS;protein_id=WP_001081661.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	43464	44471	.	+	.	ID=gene-C9E97_RS01480;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=C9E97_RS01480;old_locus_tag=C9E97_01520
NZ_PYKA01000020.1	Protein Homology	CDS	43464	44471	.	+	0	ID=cds-WP_001277879.1;Parent=gene-C9E97_RS01480;Dbxref=GenBank:WP_001277879.1;Name=WP_001277879.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459584.1;locus_tag=C9E97_RS01480;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_001277879.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	44471	45460	.	+	.	ID=gene-C9E97_RS01485;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=C9E97_RS01485;old_locus_tag=C9E97_01525
NZ_PYKA01000020.1	Protein Homology	CDS	44471	45460	.	+	0	ID=cds-WP_000480067.1;Parent=gene-C9E97_RS01485;Dbxref=GenBank:WP_000480067.1;Name=WP_000480067.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459583.1;locus_tag=C9E97_RS01485;product=iron-enterobactin ABC transporter permease;protein_id=WP_000480067.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	45457	46251	.	+	.	ID=gene-C9E97_RS01490;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=C9E97_RS01490;old_locus_tag=C9E97_01530
NZ_PYKA01000020.1	Protein Homology	CDS	45457	46251	.	+	0	ID=cds-WP_000140622.1;Parent=gene-C9E97_RS01490;Dbxref=GenBank:WP_000140622.1;Name=WP_000140622.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459582.1;locus_tag=C9E97_RS01490;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_000140622.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	46304	47440	.	-	.	ID=gene-C9E97_RS01495;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=C9E97_RS01495;old_locus_tag=C9E97_01535
NZ_PYKA01000020.1	Protein Homology	CDS	46304	47440	.	-	0	ID=cds-WP_135369278.1;Parent=gene-C9E97_RS01495;Dbxref=GenBank:WP_135369278.1;Name=WP_135369278.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=C9E97_RS01495;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WP_135369278.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	47690	51574	.	-	.	ID=gene-C9E97_RS01500;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=C9E97_RS01500;old_locus_tag=C9E97_01540
NZ_PYKA01000020.1	Protein Homology	CDS	47690	51574	.	-	0	ID=cds-WP_135369290.1;Parent=gene-C9E97_RS01500;Dbxref=GenBank:WP_135369290.1;Name=WP_135369290.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=C9E97_RS01500;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_135369290.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	51571	51789	.	-	.	ID=gene-C9E97_RS01505;Name=C9E97_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01505;old_locus_tag=C9E97_01545
NZ_PYKA01000020.1	Protein Homology	CDS	51571	51789	.	-	0	ID=cds-WP_000396006.1;Parent=gene-C9E97_RS01505;Dbxref=GenBank:WP_000396006.1;Name=WP_000396006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459579.1;locus_tag=C9E97_RS01505;product=MbtH family protein;protein_id=WP_000396006.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	51820	53034	.	-	.	ID=gene-C9E97_RS01510;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=C9E97_RS01510;old_locus_tag=C9E97_01550
NZ_PYKA01000020.1	Protein Homology	CDS	51820	53034	.	-	0	ID=cds-WP_000656600.1;Parent=gene-C9E97_RS01510;Dbxref=GenBank:WP_000656600.1;Name=WP_000656600.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459578.1;locus_tag=C9E97_RS01510;product=enterochelin esterase;protein_id=WP_000656600.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	53223	55478	.	+	.	ID=gene-C9E97_RS01515;Name=C9E97_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01515;old_locus_tag=C9E97_01555
NZ_PYKA01000020.1	Protein Homology	CDS	53223	55478	.	+	0	ID=cds-WP_017466026.1;Parent=gene-C9E97_RS01515;Dbxref=GenBank:WP_017466026.1;Name=WP_017466026.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459577.1;locus_tag=C9E97_RS01515;product=TonB-dependent siderophore receptor;protein_id=WP_017466026.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	55525	56229	.	+	.	ID=gene-C9E97_RS01520;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=C9E97_RS01520;old_locus_tag=C9E97_01560
NZ_PYKA01000020.1	Protein Homology	CDS	55525	56229	.	+	0	ID=cds-WP_135369289.1;Parent=gene-C9E97_RS01520;Dbxref=GenBank:WP_135369289.1;Name=WP_135369289.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459576.1;locus_tag=C9E97_RS01520;product=enterobactin synthase subunit EntD;protein_id=WP_135369289.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	56241	57359	.	+	.	ID=gene-C9E97_RS01525;Name=C9E97_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01525;old_locus_tag=C9E97_01565
NZ_PYKA01000020.1	Protein Homology	CDS	56241	57359	.	+	0	ID=cds-WP_135369288.1;Parent=gene-C9E97_RS01525;Dbxref=GenBank:WP_135369288.1;Name=WP_135369288.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459575.1;locus_tag=C9E97_RS01525;product=YbdK family carboxylate-amine ligase;protein_id=WP_135369288.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	57426	57674	.	+	.	ID=gene-C9E97_RS01530;Name=C9E97_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01530;old_locus_tag=C9E97_01570
NZ_PYKA01000020.1	Protein Homology	CDS	57426	57674	.	+	0	ID=cds-WP_000682497.1;Parent=gene-C9E97_RS01530;Dbxref=GenBank:WP_000682497.1;Name=WP_000682497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459574.1;locus_tag=C9E97_RS01530;product=DUF1158 family protein;protein_id=WP_000682497.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	57680	58021	.	-	.	ID=gene-C9E97_RS01535;Name=C9E97_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01535;old_locus_tag=C9E97_01575
NZ_PYKA01000020.1	Protein Homology	CDS	57680	58021	.	-	0	ID=cds-WP_000155633.1;Parent=gene-C9E97_RS01535;Dbxref=GenBank:WP_000155633.1;Name=WP_000155633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459573.1;locus_tag=C9E97_RS01535;product=RamA family antibiotic efflux transcriptional regulator;protein_id=WP_000155633.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	58310	58891	.	+	.	ID=gene-C9E97_RS01540;Name=C9E97_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01540;old_locus_tag=C9E97_01580
NZ_PYKA01000020.1	Protein Homology	CDS	58310	58891	.	+	0	ID=cds-WP_000113609.1;Parent=gene-C9E97_RS01540;Dbxref=GenBank:WP_000113609.1;Name=WP_000113609.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459572.1;locus_tag=C9E97_RS01540;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000113609.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	58891	59259	.	+	.	ID=gene-C9E97_RS01545;Name=C9E97_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01545;old_locus_tag=C9E97_01585
NZ_PYKA01000020.1	Protein Homology	CDS	58891	59259	.	+	0	ID=cds-WP_000348999.1;Parent=gene-C9E97_RS01545;Dbxref=GenBank:WP_000348999.1;Name=WP_000348999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459571.1;locus_tag=C9E97_RS01545;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000348999.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	59356	60009	.	+	.	ID=gene-C9E97_RS01550;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=C9E97_RS01550;old_locus_tag=C9E97_01590
NZ_PYKA01000020.1	Protein Homology	CDS	59356	60009	.	+	0	ID=cds-WP_000355869.1;Parent=gene-C9E97_RS01550;Dbxref=GenBank:WP_000355869.1;Name=WP_000355869.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459570.1;locus_tag=C9E97_RS01550;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_000355869.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	60209	60658	.	+	.	ID=gene-C9E97_RS01555;Name=C9E97_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01555;old_locus_tag=C9E97_01595
NZ_PYKA01000020.1	Protein Homology	CDS	60209	60658	.	+	0	ID=cds-WP_001216659.1;Parent=gene-C9E97_RS01555;Dbxref=GenBank:WP_001216659.1;Name=WP_001216659.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459569.1;locus_tag=C9E97_RS01555;product=PTS sugar transporter subunit IIA;protein_id=WP_001216659.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	60636	61106	.	+	.	ID=gene-C9E97_RS01560;Name=C9E97_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01560;old_locus_tag=C9E97_01600
NZ_PYKA01000020.1	Protein Homology	CDS	60636	61106	.	+	0	ID=cds-WP_000594177.1;Parent=gene-C9E97_RS01560;Dbxref=GenBank:WP_000594177.1;Name=WP_000594177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459568.1;locus_tag=C9E97_RS01560;product=PTS sugar transporter subunit IIB;protein_id=WP_000594177.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	61121	61864	.	+	.	ID=gene-C9E97_RS01565;Name=C9E97_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01565;old_locus_tag=C9E97_01605
NZ_PYKA01000020.1	Protein Homology	CDS	61121	61864	.	+	0	ID=cds-WP_000927522.1;Parent=gene-C9E97_RS01565;Dbxref=GenBank:WP_000927522.1;Name=WP_000927522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459567.1;locus_tag=C9E97_RS01565;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000927522.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	61867	62721	.	+	.	ID=gene-C9E97_RS01570;Name=C9E97_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01570;old_locus_tag=C9E97_01610
NZ_PYKA01000020.1	Protein Homology	CDS	61867	62721	.	+	0	ID=cds-WP_023233555.1;Parent=gene-C9E97_RS01570;Dbxref=GenBank:WP_023233555.1;Name=WP_023233555.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459566.1;locus_tag=C9E97_RS01570;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_023233555.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	62754	63797	.	+	.	ID=gene-C9E97_RS01575;Name=C9E97_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01575;old_locus_tag=C9E97_01615
NZ_PYKA01000020.1	Protein Homology	CDS	62754	63797	.	+	0	ID=cds-WP_023139453.1;Parent=gene-C9E97_RS01575;Dbxref=GenBank:WP_023139453.1;Name=WP_023139453.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459565.1;locus_tag=C9E97_RS01575;product=glutamine--fructose-6-phosphate aminotransferase;protein_id=WP_023139453.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	63864	64850	.	+	.	ID=gene-C9E97_RS01580;Name=C9E97_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01580;old_locus_tag=C9E97_01620
NZ_PYKA01000020.1	Protein Homology	CDS	63864	64850	.	+	0	ID=cds-WP_000109360.1;Parent=gene-C9E97_RS01580;Dbxref=GenBank:WP_000109360.1;Name=WP_000109360.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459564.1;locus_tag=C9E97_RS01580;product=SIS domain-containing protein;protein_id=WP_000109360.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	64978	67707	.	-	.	ID=gene-C9E97_RS01585;Name=C9E97_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01585;old_locus_tag=C9E97_01625
NZ_PYKA01000020.1	Protein Homology	CDS	64978	67707	.	-	0	ID=cds-WP_135369287.1;Parent=gene-C9E97_RS01585;Dbxref=GenBank:WP_135369287.1;Name=WP_135369287.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459563.1;locus_tag=C9E97_RS01585;product=sigma 54-interacting transcriptional regulator;protein_id=WP_135369287.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	67874	69844	.	-	.	ID=gene-C9E97_RS01590;Name=C9E97_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01590;old_locus_tag=C9E97_01630
NZ_PYKA01000020.1	Protein Homology	CDS	67874	69844	.	-	0	ID=cds-WP_135369286.1;Parent=gene-C9E97_RS01590;Dbxref=GenBank:WP_135369286.1;Name=WP_135369286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459562.1;locus_tag=C9E97_RS01590;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_135369286.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	70155	71402	.	+	.	ID=gene-C9E97_RS01595;Name=C9E97_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01595;old_locus_tag=C9E97_01640
NZ_PYKA01000020.1	Protein Homology	CDS	70155	71402	.	+	0	ID=cds-WP_079951149.1;Parent=gene-C9E97_RS01595;Dbxref=GenBank:WP_079951149.1;Name=WP_079951149.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459561.1;locus_tag=C9E97_RS01595;product=mechanosensitive ion channel family protein;protein_id=WP_079951149.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	71444	72838	.	-	.	ID=gene-C9E97_RS01600;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=C9E97_RS01600;old_locus_tag=C9E97_01645
NZ_PYKA01000020.1	Protein Homology	CDS	71444	72838	.	-	0	ID=cds-WP_000786288.1;Parent=gene-C9E97_RS01600;Dbxref=GenBank:WP_000786288.1;Name=WP_000786288.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459560.1;locus_tag=C9E97_RS01600;product=phenylalanine transporter;protein_id=WP_000786288.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	73164	74339	.	+	.	ID=gene-C9E97_RS01605;Name=C9E97_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01605;old_locus_tag=C9E97_01650
NZ_PYKA01000020.1	Protein Homology	CDS	73164	74339	.	+	0	ID=cds-WP_001033457.1;Parent=gene-C9E97_RS01605;Dbxref=GenBank:WP_001033457.1;Name=WP_001033457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=C9E97_RS01605;product=DnaJ family molecular chaperone;protein_id=WP_001033457.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	74418	74978	.	-	.	ID=gene-C9E97_RS01610;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=C9E97_RS01610;old_locus_tag=C9E97_01655
NZ_PYKA01000020.1	Protein Homology	CDS	74418	74978	.	-	0	ID=cds-WP_000362177.1;Parent=gene-C9E97_RS01610;Dbxref=GenBank:WP_000362177.1;Name=WP_000362177.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459558.1;locus_tag=C9E97_RS01610;product=reactive chlorine resistance membrane protein RclC;protein_id=WP_000362177.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	74991	75227	.	-	.	ID=gene-C9E97_RS01615;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=C9E97_RS01615;old_locus_tag=C9E97_01660
NZ_PYKA01000020.1	Protein Homology	CDS	74991	75227	.	-	0	ID=cds-WP_000922170.1;Parent=gene-C9E97_RS01615;Dbxref=GenBank:WP_000922170.1;Name=WP_000922170.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459557.1;locus_tag=C9E97_RS01615;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WP_000922170.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	75384	76709	.	-	.	ID=gene-C9E97_RS01620;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=C9E97_RS01620;old_locus_tag=C9E97_01665
NZ_PYKA01000020.1	Protein Homology	CDS	75384	76709	.	-	0	ID=cds-WP_000195929.1;Parent=gene-C9E97_RS01620;Dbxref=GenBank:WP_000195929.1;Name=WP_000195929.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459556.1;locus_tag=C9E97_RS01620;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WP_000195929.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	76925	77779	.	+	.	ID=gene-C9E97_RS01625;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=C9E97_RS01625;old_locus_tag=C9E97_01670
NZ_PYKA01000020.1	Protein Homology	CDS	76925	77779	.	+	0	ID=cds-WP_135369285.1;Parent=gene-C9E97_RS01625;Dbxref=GenBank:WP_135369285.1;Name=WP_135369285.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459555.1;locus_tag=C9E97_RS01625;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WP_135369285.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	pseudogene	77830	77943	.	-	.	ID=gene-C9E97_RS23430;Name=C9E97_RS23430;end_range=77943,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23430;partial=true;pseudo=true
NZ_PYKA01000020.1	Protein Homology	CDS	77830	77943	.	-	0	ID=cds-C9E97_RS23430;Parent=gene-C9E97_RS23430;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=77943,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000574020.1;locus_tag=C9E97_RS23430;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKA01000020.1	RefSeq	pseudogene	77937	78116	.	+	.	ID=gene-C9E97_RS01630;Name=C9E97_RS01630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS01630;old_locus_tag=C9E97_01675;partial=true;pseudo=true;start_range=.,77937
NZ_PYKA01000020.1	Protein Homology	CDS	77937	78116	.	+	0	ID=cds-C9E97_RS01630;Parent=gene-C9E97_RS01630;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635961.1;locus_tag=C9E97_RS01630;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,77937;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	78316	78561	.	+	.	ID=gene-C9E97_RS01635;Name=C9E97_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01635;old_locus_tag=C9E97_01680
NZ_PYKA01000020.1	Protein Homology	CDS	78316	78561	.	+	0	ID=cds-WP_061383624.1;Parent=gene-C9E97_RS01635;Dbxref=GenBank:WP_061383624.1;Name=WP_061383624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000230236.1;locus_tag=C9E97_RS01635;product=hypothetical protein;protein_id=WP_061383624.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	78985	79347	.	+	.	ID=gene-C9E97_RS01640;Name=C9E97_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01640;old_locus_tag=C9E97_01685
NZ_PYKA01000020.1	Protein Homology	CDS	78985	79347	.	+	0	ID=cds-WP_000915520.1;Parent=gene-C9E97_RS01640;Dbxref=GenBank:WP_000915520.1;Name=WP_000915520.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459552.1;locus_tag=C9E97_RS01640;product=GtrA family protein;protein_id=WP_000915520.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	79344	80270	.	+	.	ID=gene-C9E97_RS01645;Name=C9E97_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01645;old_locus_tag=C9E97_01690
NZ_PYKA01000020.1	Protein Homology	CDS	79344	80270	.	+	0	ID=cds-WP_135369284.1;Parent=gene-C9E97_RS01645;Dbxref=GenBank:WP_135369284.1;Name=WP_135369284.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459551.1;locus_tag=C9E97_RS01645;product=glycosyltransferase family 2 protein;protein_id=WP_135369284.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	80251	81903	.	+	.	ID=gene-C9E97_RS01650;Name=gtrC1;gbkey=Gene;gene=gtrC1;gene_biotype=protein_coding;locus_tag=C9E97_RS01650;old_locus_tag=C9E97_01695
NZ_PYKA01000020.1	Protein Homology	CDS	80251	81903	.	+	0	ID=cds-WP_010988978.1;Parent=gene-C9E97_RS01650;Dbxref=GenBank:WP_010988978.1;Name=WP_010988978.1;gbkey=CDS;gene=gtrC1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459550.1;locus_tag=C9E97_RS01650;product=putative glucosyltransferase GtrC1;protein_id=WP_010988978.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	82290	82508	.	+	.	ID=gene-C9E97_RS23640;Name=C9E97_RS23640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23640
NZ_PYKA01000020.1	Protein Homology	CDS	82290	82508	.	+	0	ID=cds-WP_240776455.1;Parent=gene-C9E97_RS23640;Dbxref=GenBank:WP_240776455.1;Name=WP_240776455.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.6;locus_tag=C9E97_RS23640;product=transposase;protein_id=WP_240776455.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	pseudogene	82543	82957	.	+	.	ID=gene-C9E97_RS23645;Name=C9E97_RS23645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23645;partial=true;pseudo=true;start_range=.,82543
NZ_PYKA01000020.1	Protein Homology	CDS	82543	82957	.	+	0	ID=cds-C9E97_RS23645;Parent=gene-C9E97_RS23645;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612006.1;locus_tag=C9E97_RS23645;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,82543;transl_table=11
NZ_PYKA01000020.1	RefSeq	pseudogene	82926	83024	.	+	.	ID=gene-C9E97_RS23650;Name=C9E97_RS23650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23650;partial=true;pseudo=true;start_range=.,82926
NZ_PYKA01000020.1	Protein Homology	CDS	82926	83024	.	+	0	ID=cds-C9E97_RS23650;Parent=gene-C9E97_RS23650;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415069.1;locus_tag=C9E97_RS23650;partial=true;product=hypothetical protein;pseudo=true;start_range=.,82926;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	83051	83127	.	-	.	ID=gene-C9E97_RS01660;Name=C9E97_RS01660;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS01660;old_locus_tag=C9E97_01705
NZ_PYKA01000020.1	tRNAscan-SE	tRNA	83051	83127	.	-	.	ID=rna-C9E97_RS01660;Parent=gene-C9E97_RS01660;anticodon=(pos:complement(83091..83093));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS01660;product=tRNA-Arg
NZ_PYKA01000020.1	tRNAscan-SE	exon	83051	83127	.	-	.	ID=exon-C9E97_RS01660-1;Parent=rna-C9E97_RS01660;anticodon=(pos:complement(83091..83093));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS01660;product=tRNA-Arg
NZ_PYKA01000020.1	RefSeq	gene	83382	83978	.	+	.	ID=gene-C9E97_RS01670;Name=fimW;gbkey=Gene;gene=fimW;gene_biotype=protein_coding;locus_tag=C9E97_RS01670;old_locus_tag=C9E97_01715
NZ_PYKA01000020.1	Protein Homology	CDS	83382	83978	.	+	0	ID=cds-WP_000948629.1;Parent=gene-C9E97_RS01670;Dbxref=GenBank:WP_000948629.1;Name=WP_000948629.1;gbkey=CDS;gene=fimW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459547.1;locus_tag=C9E97_RS01670;product=fimbria biosynthesis transcriptional regulator FimW;protein_id=WP_000948629.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	84140	84451	.	+	.	ID=gene-C9E97_RS01675;Name=C9E97_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01675;old_locus_tag=C9E97_01720
NZ_PYKA01000020.1	Protein Homology	CDS	84140	84451	.	+	0	ID=cds-WP_000226501.1;Parent=gene-C9E97_RS01675;Dbxref=GenBank:WP_000226501.1;Name=WP_000226501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459546.1;locus_tag=C9E97_RS01675;product=hypothetical protein;protein_id=WP_000226501.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	84470	85192	.	+	.	ID=gene-C9E97_RS01680;Name=fimY;gbkey=Gene;gene=fimY;gene_biotype=protein_coding;locus_tag=C9E97_RS01680;old_locus_tag=C9E97_01725
NZ_PYKA01000020.1	Protein Homology	CDS	84470	85192	.	+	0	ID=cds-WP_135369164.1;Parent=gene-C9E97_RS01680;Dbxref=GenBank:WP_135369164.1;Name=WP_135369164.1;gbkey=CDS;gene=fimY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459545.1;locus_tag=C9E97_RS01680;product=fimbria biosynthesis regulator FimY;protein_id=WP_135369164.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	85796	86428	.	+	.	ID=gene-C9E97_RS01685;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=C9E97_RS01685;old_locus_tag=C9E97_01730
NZ_PYKA01000020.1	Protein Homology	CDS	85796	86428	.	+	0	ID=cds-WP_000801272.1;Parent=gene-C9E97_RS01685;Dbxref=GenBank:WP_000801272.1;Name=WP_000801272.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459544.1;locus_tag=C9E97_RS01685;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WP_000801272.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	86474	86992	.	-	.	ID=gene-C9E97_RS01690;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=C9E97_RS01690;old_locus_tag=C9E97_01735
NZ_PYKA01000020.1	Protein Homology	CDS	86474	86992	.	-	0	ID=cds-WP_000603405.1;Parent=gene-C9E97_RS01690;Dbxref=GenBank:WP_000603405.1;Name=WP_000603405.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459543.1;locus_tag=C9E97_RS01690;product=fimbria assembly protein;protein_id=WP_000603405.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	87002	88009	.	-	.	ID=gene-C9E97_RS01695;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=C9E97_RS01695;old_locus_tag=C9E97_01740
NZ_PYKA01000020.1	Protein Homology	CDS	87002	88009	.	-	0	ID=cds-WP_094963764.1;Parent=gene-C9E97_RS01695;Dbxref=GenBank:WP_094963764.1;Name=WP_094963764.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459542.1;locus_tag=C9E97_RS01695;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_094963764.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	88024	90636	.	-	.	ID=gene-C9E97_RS01700;Name=C9E97_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01700;old_locus_tag=C9E97_01745
NZ_PYKA01000020.1	Protein Homology	CDS	88024	90636	.	-	0	ID=cds-WP_135369529.1;Parent=gene-C9E97_RS01700;Dbxref=GenBank:WP_135369529.1;Name=WP_135369529.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459541.1;locus_tag=C9E97_RS01700;product=fimbrial biogenesis usher protein;protein_id=WP_135369529.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	90667	91359	.	-	.	ID=gene-C9E97_RS01705;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=C9E97_RS01705;old_locus_tag=C9E97_01750
NZ_PYKA01000020.1	Protein Homology	CDS	90667	91359	.	-	0	ID=cds-WP_001531073.1;Parent=gene-C9E97_RS01705;Dbxref=GenBank:WP_001531073.1;Name=WP_001531073.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459540.1;locus_tag=C9E97_RS01705;product=type 1 fimbria chaperone FimC;protein_id=WP_001531073.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	91403	91936	.	-	.	ID=gene-C9E97_RS01710;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=C9E97_RS01710;old_locus_tag=C9E97_01755
NZ_PYKA01000020.1	Protein Homology	CDS	91403	91936	.	-	0	ID=cds-WP_080110530.1;Parent=gene-C9E97_RS01710;Dbxref=GenBank:WP_080110530.1;Name=WP_080110530.1;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459539.1;locus_tag=C9E97_RS01710;product=type 1 fimbrial protein subunit FimI;protein_id=WP_080110530.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	92011	92568	.	-	.	ID=gene-C9E97_RS01715;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=C9E97_RS01715;old_locus_tag=C9E97_01760
NZ_PYKA01000020.1	Protein Homology	CDS	92011	92568	.	-	0	ID=cds-WP_080222818.1;Parent=gene-C9E97_RS01715;Dbxref=GenBank:WP_080222818.1;Name=WP_080222818.1;gbkey=CDS;gene=fimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459538.3;locus_tag=C9E97_RS01715;product=type 1 fimbrial protein subunit FimA;protein_id=WP_080222818.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	93115	93981	.	+	.	ID=gene-C9E97_RS01725;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=C9E97_RS01725;old_locus_tag=C9E97_01770
NZ_PYKA01000020.1	Protein Homology	CDS	93115	93981	.	+	0	ID=cds-WP_000729165.1;Parent=gene-C9E97_RS01725;Dbxref=GenBank:WP_000729165.1;Name=WP_000729165.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459537.1;locus_tag=C9E97_RS01725;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_000729165.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	93983	94195	.	+	.	ID=gene-C9E97_RS01730;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=C9E97_RS01730;old_locus_tag=C9E97_01775
NZ_PYKA01000020.1	Protein Homology	CDS	93983	94195	.	+	0	ID=cds-WP_000190278.1;Parent=gene-C9E97_RS01730;Dbxref=GenBank:WP_000190278.1;Name=WP_000190278.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459536.1;locus_tag=C9E97_RS01730;product=ribosome-associated protein YbcJ;protein_id=WP_000190278.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	94322	94870	.	+	.	ID=gene-C9E97_RS01735;Name=C9E97_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01735;old_locus_tag=C9E97_01780
NZ_PYKA01000020.1	Protein Homology	CDS	94322	94870	.	+	0	ID=cds-WP_134938315.1;Parent=gene-C9E97_RS01735;Dbxref=GenBank:WP_134938315.1;Name=WP_134938315.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728132.1;locus_tag=C9E97_RS01735;product=metal-dependent hydrolase;protein_id=WP_134938315.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	94961	96346	.	-	.	ID=gene-C9E97_RS01740;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=C9E97_RS01740;old_locus_tag=C9E97_01785
NZ_PYKA01000020.1	Protein Homology	CDS	94961	96346	.	-	0	ID=cds-WP_000912376.1;Parent=gene-C9E97_RS01740;Dbxref=GenBank:WP_000912376.1;Name=WP_000912376.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=C9E97_RS01740;product=cysteine--tRNA ligase;protein_id=WP_000912376.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	96519	97013	.	+	.	ID=gene-C9E97_RS01745;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=C9E97_RS01745;old_locus_tag=C9E97_01790
NZ_PYKA01000020.1	Protein Homology	CDS	96519	97013	.	+	0	ID=cds-WP_000255991.1;Parent=gene-C9E97_RS01745;Dbxref=GenBank:WP_000255991.1;Name=WP_000255991.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=C9E97_RS01745;product=peptidylprolyl isomerase B;protein_id=WP_000255991.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	97016	97738	.	+	.	ID=gene-C9E97_RS01750;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=C9E97_RS01750;old_locus_tag=C9E97_01795
NZ_PYKA01000020.1	Protein Homology	CDS	97016	97738	.	+	0	ID=cds-WP_000212284.1;Parent=gene-C9E97_RS01750;Dbxref=GenBank:WP_000212284.1;Name=WP_000212284.1;Ontology_term=GO:0009245,GO:0008758,GO:0016462,GO:0005737;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||IEA;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459530.1;locus_tag=C9E97_RS01750;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_000212284.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	97856	98365	.	+	.	ID=gene-C9E97_RS01755;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=C9E97_RS01755;old_locus_tag=C9E97_01805
NZ_PYKA01000020.1	Protein Homology	CDS	97856	98365	.	+	0	ID=cds-WP_000098736.1;Parent=gene-C9E97_RS01755;Dbxref=GenBank:WP_000098736.1;Name=WP_000098736.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459529.1;locus_tag=C9E97_RS01755;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_000098736.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	98362	99429	.	+	.	ID=gene-C9E97_RS01760;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=C9E97_RS01760;old_locus_tag=C9E97_01810
NZ_PYKA01000020.1	Protein Homology	CDS	98362	99429	.	+	0	ID=cds-WP_000815599.1;Parent=gene-C9E97_RS01760;Dbxref=GenBank:WP_000815599.1;Name=WP_000815599.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459528.1;locus_tag=C9E97_RS01760;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_000815599.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	99470	100363	.	-	.	ID=gene-C9E97_RS01765;Name=C9E97_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01765;old_locus_tag=C9E97_01815
NZ_PYKA01000020.1	Protein Homology	CDS	99470	100363	.	-	0	ID=cds-WP_000855344.1;Parent=gene-C9E97_RS01765;Dbxref=GenBank:WP_000855344.1;Name=WP_000855344.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459527.1;locus_tag=C9E97_RS01765;product=carbamate kinase;protein_id=WP_000855344.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	100367	101176	.	-	.	ID=gene-C9E97_RS01770;Name=C9E97_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01770;old_locus_tag=C9E97_01820
NZ_PYKA01000020.1	Protein Homology	CDS	100367	101176	.	-	0	ID=cds-WP_135369527.1;Parent=gene-C9E97_RS01770;Dbxref=GenBank:WP_135369527.1;Name=WP_135369527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459526.1;locus_tag=C9E97_RS01770;product=DUF2877 domain-containing protein;protein_id=WP_135369527.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	101188	102447	.	-	.	ID=gene-C9E97_RS01775;Name=C9E97_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01775;old_locus_tag=C9E97_01825
NZ_PYKA01000020.1	Protein Homology	CDS	101188	102447	.	-	0	ID=cds-WP_000495330.1;Parent=gene-C9E97_RS01775;Dbxref=GenBank:WP_000495330.1;Name=WP_000495330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459525.1;locus_tag=C9E97_RS01775;product=DUF1116 domain-containing protein;protein_id=WP_000495330.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	102457	104121	.	-	.	ID=gene-C9E97_RS01780;Name=C9E97_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01780;old_locus_tag=C9E97_01830
NZ_PYKA01000020.1	Protein Homology	CDS	102457	104121	.	-	0	ID=cds-WP_079942828.1;Parent=gene-C9E97_RS01780;Dbxref=GenBank:WP_079942828.1;Name=WP_079942828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459524.1;locus_tag=C9E97_RS01780;product=acyl-CoA synthetase FdrA;protein_id=WP_079942828.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	104437	105486	.	+	.	ID=gene-C9E97_RS01785;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=C9E97_RS01785;old_locus_tag=C9E97_01835
NZ_PYKA01000020.1	Protein Homology	CDS	104437	105486	.	+	0	ID=cds-WP_023250795.1;Parent=gene-C9E97_RS01785;Dbxref=GenBank:WP_023250795.1;Name=WP_023250795.1;gbkey=CDS;gene=allD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459523.1;locus_tag=C9E97_RS01785;product=ureidoglycolate dehydrogenase AllD;protein_id=WP_023250795.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	105508	106743	.	+	.	ID=gene-C9E97_RS01790;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=C9E97_RS01790;old_locus_tag=C9E97_01840
NZ_PYKA01000020.1	Protein Homology	CDS	105508	106743	.	+	0	ID=cds-WP_000589759.1;Parent=gene-C9E97_RS01790;Dbxref=GenBank:WP_000589759.1;Name=WP_000589759.1;Ontology_term=GO:0000256,GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA,allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459522.1;locus_tag=C9E97_RS01790;product=allantoate deiminase;protein_id=WP_000589759.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	106754	107539	.	+	.	ID=gene-C9E97_RS01795;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=C9E97_RS01795;old_locus_tag=C9E97_01845
NZ_PYKA01000020.1	Protein Homology	CDS	106754	107539	.	+	0	ID=cds-WP_000540985.1;Parent=gene-C9E97_RS01795;Dbxref=GenBank:WP_000540985.1;Name=WP_000540985.1;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459521.1;locus_tag=C9E97_RS01795;product=(S)-ureidoglycine aminohydrolase;protein_id=WP_000540985.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	107619	108767	.	-	.	ID=gene-C9E97_RS01800;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=C9E97_RS01800;old_locus_tag=C9E97_01850
NZ_PYKA01000020.1	Protein Homology	CDS	107619	108767	.	-	0	ID=cds-WP_000706331.1;Parent=gene-C9E97_RS01800;Dbxref=GenBank:WP_000706331.1;Name=WP_000706331.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459520.1;locus_tag=C9E97_RS01800;product=glycerate 3-kinase;protein_id=WP_000706331.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	108790	110088	.	-	.	ID=gene-C9E97_RS01805;Name=C9E97_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01805;old_locus_tag=C9E97_01855
NZ_PYKA01000020.1	Protein Homology	CDS	108790	110088	.	-	0	ID=cds-WP_000484505.1;Parent=gene-C9E97_RS01805;Dbxref=GenBank:WP_000484505.1;Name=WP_000484505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459519.1;locus_tag=C9E97_RS01805;product=uracil/xanthine transporter;protein_id=WP_000484505.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	110147	111508	.	-	.	ID=gene-C9E97_RS01810;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=C9E97_RS01810;old_locus_tag=C9E97_01860
NZ_PYKA01000020.1	Protein Homology	CDS	110147	111508	.	-	0	ID=cds-WP_000006865.1;Parent=gene-C9E97_RS01810;Dbxref=GenBank:WP_000006865.1;Name=WP_000006865.1;Ontology_term=GO:0000256,GO:0004038;gbkey=CDS;gene=allB;go_function=allantoinase activity|0004038||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459518.1;locus_tag=C9E97_RS01810;product=allantoinase AllB;protein_id=WP_000006865.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	111587	113041	.	-	.	ID=gene-C9E97_RS01815;Name=C9E97_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01815;old_locus_tag=C9E97_01865
NZ_PYKA01000020.1	Protein Homology	CDS	111587	113041	.	-	0	ID=cds-WP_000401066.1;Parent=gene-C9E97_RS01815;Dbxref=GenBank:WP_000401066.1;Name=WP_000401066.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=C9E97_RS01815;product=allantoin transporter;protein_id=WP_000401066.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	113137	114384	.	-	.	ID=gene-C9E97_RS01820;Name=C9E97_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01820;old_locus_tag=C9E97_01870
NZ_PYKA01000020.1	Protein Homology	CDS	113137	114384	.	-	0	ID=cds-WP_000005063.1;Parent=gene-C9E97_RS01820;Dbxref=GenBank:WP_000005063.1;Name=WP_000005063.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459515.1;locus_tag=C9E97_RS01820;product=MFS transporter;protein_id=WP_000005063.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	114450	115328	.	-	.	ID=gene-C9E97_RS01825;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=C9E97_RS01825;old_locus_tag=C9E97_01875
NZ_PYKA01000020.1	Protein Homology	CDS	114450	115328	.	-	0	ID=cds-WP_000765815.1;Parent=gene-C9E97_RS01825;Dbxref=GenBank:WP_000765815.1;Name=WP_000765815.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459514.1;locus_tag=C9E97_RS01825;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000765815.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	115429	116205	.	-	.	ID=gene-C9E97_RS01830;Name=gip;gbkey=Gene;gene=gip;gene_biotype=protein_coding;locus_tag=C9E97_RS01830;old_locus_tag=C9E97_01880
NZ_PYKA01000020.1	Protein Homology	CDS	115429	116205	.	-	0	ID=cds-WP_000943591.1;Parent=gene-C9E97_RS01830;Dbxref=GenBank:WP_000943591.1;Name=WP_000943591.1;gbkey=CDS;gene=gip;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459513.1;locus_tag=C9E97_RS01830;product=hydroxypyruvate isomerase Gip;protein_id=WP_000943591.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	116218	117999	.	-	.	ID=gene-C9E97_RS01835;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=C9E97_RS01835;old_locus_tag=C9E97_01885
NZ_PYKA01000020.1	Protein Homology	CDS	116218	117999	.	-	0	ID=cds-WP_001096865.1;Parent=gene-C9E97_RS01835;Dbxref=GenBank:WP_001096865.1;Name=WP_001096865.1;Ontology_term=GO:0009436,GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;go_process=glyoxylate catabolic process|0009436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459512.1;locus_tag=C9E97_RS01835;product=glyoxylate carboligase;protein_id=WP_001096865.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	118084	118902	.	-	.	ID=gene-C9E97_RS01840;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=C9E97_RS01840;old_locus_tag=C9E97_01890
NZ_PYKA01000020.1	Protein Homology	CDS	118084	118902	.	-	0	ID=cds-WP_000141265.1;Parent=gene-C9E97_RS01840;Dbxref=GenBank:WP_000141265.1;Name=WP_000141265.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459511.1;locus_tag=C9E97_RS01840;product=HTH-type transcriptional repressor AllR;protein_id=WP_000141265.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	118981	119463	.	-	.	ID=gene-C9E97_RS01845;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=C9E97_RS01845;old_locus_tag=C9E97_01895
NZ_PYKA01000020.1	Protein Homology	CDS	118981	119463	.	-	0	ID=cds-WP_000764659.1;Parent=gene-C9E97_RS01845;Dbxref=GenBank:WP_000764659.1;Name=WP_000764659.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459510.1;locus_tag=C9E97_RS01845;product=ureidoglycolate lyase;protein_id=WP_000764659.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	119690	120616	.	+	.	ID=gene-C9E97_RS01850;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;locus_tag=C9E97_RS01850;old_locus_tag=C9E97_01900
NZ_PYKA01000020.1	Protein Homology	CDS	119690	120616	.	+	0	ID=cds-WP_000460169.1;Parent=gene-C9E97_RS01850;Dbxref=GenBank:WP_000460169.1;Name=WP_000460169.1;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459509.1;locus_tag=C9E97_RS01850;product=HTH-type transcriptional activator AllS;protein_id=WP_000460169.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	120686	121780	.	+	.	ID=gene-C9E97_RS01855;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=C9E97_RS01855;old_locus_tag=C9E97_01905
NZ_PYKA01000020.1	Protein Homology	CDS	120686	121780	.	+	0	ID=cds-WP_001154077.1;Parent=gene-C9E97_RS01855;Dbxref=GenBank:WP_001154077.1;Name=WP_001154077.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459508.1;locus_tag=C9E97_RS01855;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_001154077.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	121809	122468	.	-	.	ID=gene-C9E97_RS01860;Name=C9E97_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01860;old_locus_tag=C9E97_01910
NZ_PYKA01000020.1	Protein Homology	CDS	121809	122468	.	-	0	ID=cds-WP_000342247.1;Parent=gene-C9E97_RS01860;Dbxref=GenBank:WP_000342247.1;Name=WP_000342247.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459507.1;locus_tag=C9E97_RS01860;product=methionine ABC transporter permease;protein_id=WP_000342247.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	122461	123477	.	-	.	ID=gene-C9E97_RS01865;Name=sfbB;gbkey=Gene;gene=sfbB;gene_biotype=protein_coding;locus_tag=C9E97_RS01865;old_locus_tag=C9E97_01915
NZ_PYKA01000020.1	Protein Homology	CDS	122461	123477	.	-	0	ID=cds-WP_000569660.1;Parent=gene-C9E97_RS01865;Dbxref=GenBank:WP_000569660.1;Name=WP_000569660.1;gbkey=CDS;gene=sfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459506.1;locus_tag=C9E97_RS01865;product=virulence-associated ABC transporter ATP-binding protein SfbB;protein_id=WP_000569660.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	123514	124344	.	-	.	ID=gene-C9E97_RS01870;Name=C9E97_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01870;old_locus_tag=C9E97_01920
NZ_PYKA01000020.1	Protein Homology	CDS	123514	124344	.	-	0	ID=cds-WP_000524311.1;Parent=gene-C9E97_RS01870;Dbxref=GenBank:WP_000524311.1;Name=WP_000524311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459505.1;locus_tag=C9E97_RS01870;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_000524311.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	124601	125734	.	-	.	ID=gene-C9E97_RS01875;Name=C9E97_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01875;old_locus_tag=C9E97_01925
NZ_PYKA01000020.1	Protein Homology	CDS	124601	125734	.	-	0	ID=cds-WP_079801861.1;Parent=gene-C9E97_RS01875;Dbxref=GenBank:WP_079801861.1;Name=WP_079801861.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459504.1;locus_tag=C9E97_RS01875;product=porin;protein_id=WP_079801861.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	125921	128335	.	-	.	ID=gene-C9E97_RS01880;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=C9E97_RS01880;old_locus_tag=C9E97_01930
NZ_PYKA01000020.1	Protein Homology	CDS	125921	128335	.	-	0	ID=cds-WP_080222944.1;Parent=gene-C9E97_RS01880;Dbxref=GenBank:WP_080222944.1;Name=WP_080222944.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=C9E97_RS01880;product=putative ABC transporter permease subunit YbbP;protein_id=WP_080222944.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	128332	129018	.	-	.	ID=gene-C9E97_RS01885;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=C9E97_RS01885;old_locus_tag=C9E97_01935
NZ_PYKA01000020.1	Protein Homology	CDS	128332	129018	.	-	0	ID=cds-WP_001110598.1;Parent=gene-C9E97_RS01885;Dbxref=GenBank:WP_001110598.1;Name=WP_001110598.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459502.1;locus_tag=C9E97_RS01885;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_001110598.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	128989	129603	.	+	.	ID=gene-C9E97_RS01890;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=C9E97_RS01890;old_locus_tag=C9E97_01940
NZ_PYKA01000020.1	Protein Homology	CDS	128989	129603	.	+	0	ID=cds-WP_001010576.1;Parent=gene-C9E97_RS01890;Dbxref=GenBank:WP_001010576.1;Name=WP_001010576.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459501.1;locus_tag=C9E97_RS01890;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_001010576.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	129758	130528	.	+	.	ID=gene-C9E97_RS01895;Name=C9E97_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01895;old_locus_tag=C9E97_01945
NZ_PYKA01000020.1	Protein Homology	CDS	129758	130528	.	+	0	ID=cds-WP_001172804.1;Parent=gene-C9E97_RS01895;Dbxref=GenBank:WP_001172804.1;Name=WP_001172804.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459500.1;locus_tag=C9E97_RS01895;product=SDR family oxidoreductase;protein_id=WP_001172804.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	130588	131442	.	+	.	ID=gene-C9E97_RS01900;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=C9E97_RS01900;old_locus_tag=C9E97_01950
NZ_PYKA01000020.1	Protein Homology	CDS	130588	131442	.	+	0	ID=cds-WP_135369148.1;Parent=gene-C9E97_RS01900;Dbxref=GenBank:WP_135369148.1;Name=WP_135369148.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459499.1;locus_tag=C9E97_RS01900;product=chaperedoxin;protein_id=WP_135369148.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	131528	132307	.	-	.	ID=gene-C9E97_RS01905;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=C9E97_RS01905;old_locus_tag=C9E97_01955
NZ_PYKA01000020.1	Protein Homology	CDS	131528	132307	.	-	0	ID=cds-WP_001002130.1;Parent=gene-C9E97_RS01905;Dbxref=GenBank:WP_001002130.1;Name=WP_001002130.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459498.1;locus_tag=C9E97_RS01905;product=iron efflux ABC transporter permease subunit FetB;protein_id=WP_001002130.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	132294	132971	.	-	.	ID=gene-C9E97_RS01910;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=C9E97_RS01910;old_locus_tag=C9E97_01960
NZ_PYKA01000020.1	Protein Homology	CDS	132294	132971	.	-	0	ID=cds-WP_080154150.1;Parent=gene-C9E97_RS01910;Dbxref=GenBank:WP_080154150.1;Name=WP_080154150.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459497.1;locus_tag=C9E97_RS01910;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=WP_080154150.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	133118	134035	.	+	.	ID=gene-C9E97_RS01915;Name=C9E97_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01915;old_locus_tag=C9E97_01965
NZ_PYKA01000020.1	Protein Homology	CDS	133118	134035	.	+	0	ID=cds-WP_000906146.1;Parent=gene-C9E97_RS01915;Dbxref=GenBank:WP_000906146.1;Name=WP_000906146.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459496.1;locus_tag=C9E97_RS01915;product=SPFH domain-containing protein;protein_id=WP_000906146.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	134032	134484	.	+	.	ID=gene-C9E97_RS01920;Name=C9E97_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01920;old_locus_tag=C9E97_01970
NZ_PYKA01000020.1	Protein Homology	CDS	134032	134484	.	+	0	ID=cds-WP_000561177.1;Parent=gene-C9E97_RS01920;Dbxref=GenBank:WP_000561177.1;Name=WP_000561177.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459495.1;locus_tag=C9E97_RS01920;product=NfeD family protein;protein_id=WP_000561177.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	134485	134901	.	-	.	ID=gene-C9E97_RS01925;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=C9E97_RS01925;old_locus_tag=C9E97_01975
NZ_PYKA01000020.1	Protein Homology	CDS	134485	134901	.	-	0	ID=cds-WP_001026760.1;Parent=gene-C9E97_RS01925;Dbxref=GenBank:WP_001026760.1;Name=WP_001026760.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459494.1;locus_tag=C9E97_RS01925;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_001026760.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	135011	137512	.	+	.	ID=gene-C9E97_RS01930;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=C9E97_RS01930;old_locus_tag=C9E97_01980
NZ_PYKA01000020.1	Protein Homology	CDS	135011	137512	.	+	0	ID=cds-WP_000083913.1;Parent=gene-C9E97_RS01930;Dbxref=GenBank:WP_000083913.1;Name=WP_000083913.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459493.1;locus_tag=C9E97_RS01930;product=copper-exporting P-type ATPase CopA;protein_id=WP_000083913.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	137666	138493	.	+	.	ID=gene-C9E97_RS01935;Name=C9E97_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01935;old_locus_tag=C9E97_01985
NZ_PYKA01000020.1	Protein Homology	CDS	137666	138493	.	+	0	ID=cds-WP_080160062.1;Parent=gene-C9E97_RS01935;Dbxref=GenBank:WP_080160062.1;Name=WP_080160062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459492.1;locus_tag=C9E97_RS01935;product=lysozyme inhibitor LprI family protein;protein_id=WP_080160062.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	138579	139373	.	+	.	ID=gene-C9E97_RS01940;Name=C9E97_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01940;old_locus_tag=C9E97_01990
NZ_PYKA01000020.1	Protein Homology	CDS	138579	139373	.	+	0	ID=cds-WP_000421861.1;Parent=gene-C9E97_RS01940;Dbxref=GenBank:WP_000421861.1;Name=WP_000421861.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459491.1;locus_tag=C9E97_RS01940;product=TraB/GumN family protein;protein_id=WP_000421861.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	139575	140054	.	+	.	ID=gene-C9E97_RS01945;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=C9E97_RS01945;old_locus_tag=C9E97_01995
NZ_PYKA01000020.1	Protein Homology	CDS	139575	140054	.	+	0	ID=cds-WP_000186618.1;Parent=gene-C9E97_RS01945;Dbxref=GenBank:WP_000186618.1;Name=WP_000186618.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=C9E97_RS01945;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186618.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	140171	141823	.	-	.	ID=gene-C9E97_RS01950;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=C9E97_RS01950;old_locus_tag=C9E97_02000
NZ_PYKA01000020.1	Protein Homology	CDS	140171	141823	.	-	0	ID=cds-WP_000670398.1;Parent=gene-C9E97_RS01950;Dbxref=GenBank:WP_000670398.1;Name=WP_000670398.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459489.1;locus_tag=C9E97_RS01950;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_000670398.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	141996	143216	.	+	.	ID=gene-C9E97_RS01955;Name=C9E97_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01955;old_locus_tag=C9E97_02005
NZ_PYKA01000020.1	Protein Homology	CDS	141996	143216	.	+	0	ID=cds-WP_001251593.1;Parent=gene-C9E97_RS01955;Dbxref=GenBank:WP_001251593.1;Name=WP_001251593.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459488.1;locus_tag=C9E97_RS01955;product=MFS transporter;protein_id=WP_001251593.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	143431	145107	.	+	.	ID=gene-C9E97_RS01960;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=C9E97_RS01960;old_locus_tag=C9E97_02010
NZ_PYKA01000020.1	Protein Homology	CDS	143431	145107	.	+	0	ID=cds-WP_000546202.1;Parent=gene-C9E97_RS01960;Dbxref=GenBank:WP_000546202.1;Name=WP_000546202.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459487.1;locus_tag=C9E97_RS01960;product=YbaL family putative K(+) efflux transporter;protein_id=WP_000546202.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	145156	146460	.	-	.	ID=gene-C9E97_RS01965;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=C9E97_RS01965;old_locus_tag=C9E97_02015
NZ_PYKA01000020.1	Protein Homology	CDS	145156	146460	.	-	0	ID=cds-WP_000671592.1;Parent=gene-C9E97_RS01965;Dbxref=GenBank:WP_000671592.1;Name=WP_000671592.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459486.1;locus_tag=C9E97_RS01965;product=inosine/guanosine kinase;protein_id=WP_000671592.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	146613	147584	.	+	.	ID=gene-C9E97_RS01970;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=C9E97_RS01970;old_locus_tag=C9E97_02020
NZ_PYKA01000020.1	Protein Homology	CDS	146613	147584	.	+	0	ID=cds-WP_001539341.1;Parent=gene-C9E97_RS01970;Dbxref=GenBank:WP_001539341.1;Name=WP_001539341.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459485.1;locus_tag=C9E97_RS01970;product=acetyl esterase;protein_id=WP_001539341.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	147581	148543	.	-	.	ID=gene-C9E97_RS01975;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=C9E97_RS01975;old_locus_tag=C9E97_02025
NZ_PYKA01000020.1	Protein Homology	CDS	147581	148543	.	-	0	ID=cds-WP_079801863.1;Parent=gene-C9E97_RS01975;Dbxref=GenBank:WP_079801863.1;Name=WP_079801863.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459484.1;locus_tag=C9E97_RS01975;product=ferrochelatase;protein_id=WP_079801863.1;transl_table=11
NZ_PYKA01000020.1	RefSeq	gene	148772	149416	.	-	.	ID=gene-C9E97_RS01980;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=C9E97_RS01980;old_locus_tag=C9E97_02030
NZ_PYKA01000020.1	Protein Homology	CDS	148772	149416	.	-	0	ID=cds-WP_001220237.1;Parent=gene-C9E97_RS01980;Dbxref=GenBank:WP_001220237.1;Name=WP_001220237.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=C9E97_RS01980;product=adenylate kinase;protein_id=WP_001220237.1;transl_table=11
##sequence-region NZ_PYKA01000003.1 1 27740
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000003.1	RefSeq	region	1	27740	.	+	.	ID=NZ_PYKA01000003.1:1..27740;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000003.1	RefSeq	gene	84	842	.	-	.	ID=gene-C9E97_RS00010;Name=C9E97_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00010;old_locus_tag=C9E97_00010
NZ_PYKA01000003.1	Protein Homology	CDS	84	842	.	-	0	ID=cds-WP_000701824.1;Parent=gene-C9E97_RS00010;Dbxref=GenBank:WP_000701824.1;Name=WP_000701824.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461993.1;locus_tag=C9E97_RS00010;product=M48 family metallopeptidase;protein_id=WP_000701824.1;transl_table=11
NZ_PYKA01000003.1	RefSeq	gene	1118	3109	.	+	.	ID=gene-C9E97_RS00015;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=C9E97_RS00015;old_locus_tag=C9E97_00015
NZ_PYKA01000003.1	Protein Homology	CDS	1118	3109	.	+	0	ID=cds-WP_000098655.1;Parent=gene-C9E97_RS00015;Dbxref=GenBank:WP_000098655.1;Name=WP_000098655.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461992.1;locus_tag=C9E97_RS00015;product=transketolase;protein_id=WP_000098655.1;transl_table=11
NZ_PYKA01000003.1	RefSeq	gene	3153	3809	.	-	.	ID=gene-C9E97_RS00020;Name=C9E97_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00020;old_locus_tag=C9E97_00020
NZ_PYKA01000003.1	Protein Homology	CDS	3153	3809	.	-	0	ID=cds-WP_023244889.1;Parent=gene-C9E97_RS00020;Dbxref=GenBank:WP_023244889.1;Name=WP_023244889.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461991.1;locus_tag=C9E97_RS00020;product=ABC transporter ATP-binding protein;protein_id=WP_023244889.1;transl_table=11
NZ_PYKA01000003.1	RefSeq	gene	3803	4480	.	-	.	ID=gene-C9E97_RS00025;Name=C9E97_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00025;old_locus_tag=C9E97_00025
NZ_PYKA01000003.1	Protein Homology	CDS	3803	4480	.	-	0	ID=cds-WP_001517914.1;Parent=gene-C9E97_RS00025;Dbxref=GenBank:WP_001517914.1;Name=WP_001517914.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461990.1;locus_tag=C9E97_RS00025;product=ABC transporter ATP-binding protein;protein_id=WP_001517914.1;transl_table=11
NZ_PYKA01000003.1	RefSeq	gene	4468	5175	.	-	.	ID=gene-C9E97_RS00030;Name=C9E97_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00030;old_locus_tag=C9E97_00030
NZ_PYKA01000003.1	Protein Homology	CDS	4468	5175	.	-	0	ID=cds-WP_001524856.1;Parent=gene-C9E97_RS00030;Dbxref=GenBank:WP_001524856.1;Name=WP_001524856.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461989.1;locus_tag=C9E97_RS00030;product=energy-coupling factor transporter transmembrane component T;protein_id=WP_001524856.1;transl_table=11
NZ_PYKA01000003.1	RefSeq	gene	5176	5754	.	-	.	ID=gene-C9E97_RS00035;Name=C9E97_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00035;old_locus_tag=C9E97_00035
NZ_PYKA01000003.1	Protein Homology	CDS	5176	5754	.	-	0	ID=cds-WP_000124001.1;Parent=gene-C9E97_RS00035;Dbxref=GenBank:WP_000124001.1;Name=WP_000124001.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461988.1;locus_tag=C9E97_RS00035;product=ECF transporter S component;protein_id=WP_000124001.1;transl_table=11
NZ_PYKA01000003.1	RefSeq	gene	5780	6205	.	-	.	ID=gene-C9E97_RS00040;Name=C9E97_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00040;old_locus_tag=C9E97_00040
NZ_PYKA01000003.1	Protein Homology	CDS	5780	6205	.	-	0	ID=cds-WP_000218567.1;Parent=gene-C9E97_RS00040;Dbxref=GenBank:WP_000218567.1;Name=WP_000218567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461987.1;locus_tag=C9E97_RS00040;product=PPC domain-containing DNA-binding protein;protein_id=WP_000218567.1;transl_table=11
NZ_PYKA01000003.1	RefSeq	gene	6579	7625	.	+	.	ID=gene-C9E97_RS00050;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=C9E97_RS00050;old_locus_tag=C9E97_00050
NZ_PYKA01000003.1	Protein Homology	CDS	6579	7625	.	+	0	ID=cds-WP_000218338.1;Parent=gene-C9E97_RS00050;Dbxref=GenBank:WP_000218338.1;Name=WP_000218338.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461986.1;locus_tag=C9E97_RS00050;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_000218338.1;transl_table=11
NZ_PYKA01000003.1	RefSeq	gene	7647	8810	.	+	.	ID=gene-C9E97_RS00055;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=C9E97_RS00055;old_locus_tag=C9E97_00055
NZ_PYKA01000003.1	Protein Homology	CDS	7647	8810	.	+	0	ID=cds-WP_000111274.1;Parent=gene-C9E97_RS00055;Dbxref=GenBank:WP_000111274.1;Name=WP_000111274.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=C9E97_RS00055;product=phosphoglycerate kinase;protein_id=WP_000111274.1;transl_table=11
NZ_PYKA01000003.1	RefSeq	gene	8912	9991	.	+	.	ID=gene-C9E97_RS00060;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=C9E97_RS00060;old_locus_tag=C9E97_00060
NZ_PYKA01000003.1	Protein Homology	CDS	8912	9991	.	+	0	ID=cds-WP_000034386.1;Parent=gene-C9E97_RS00060;Dbxref=GenBank:WP_000034386.1;Name=WP_000034386.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=C9E97_RS00060;product=class II fructose-bisphosphate aldolase;protein_id=WP_000034386.1;transl_table=11
NZ_PYKA01000003.1	RefSeq	gene	10218	11078	.	+	.	ID=gene-C9E97_RS00065;Name=C9E97_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00065;old_locus_tag=C9E97_00065
NZ_PYKA01000003.1	Protein Homology	CDS	10218	11078	.	+	0	ID=cds-WP_000389833.1;Parent=gene-C9E97_RS00065;Dbxref=GenBank:WP_000389833.1;Name=WP_000389833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461983.1;locus_tag=C9E97_RS00065;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000389833.1;transl_table=11
NZ_PYKA01000003.1	RefSeq	gene	11278	11913	.	+	.	ID=gene-C9E97_RS00070;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=C9E97_RS00070;old_locus_tag=C9E97_00070
NZ_PYKA01000003.1	Protein Homology	CDS	11278	11913	.	+	0	ID=cds-WP_000626863.1;Parent=gene-C9E97_RS00070;Dbxref=GenBank:WP_000626863.1;Name=WP_000626863.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461982.1;locus_tag=C9E97_RS00070;product=arginine exporter ArgO;protein_id=WP_000626863.1;transl_table=11
NZ_PYKA01000003.1	RefSeq	gene	12007	12753	.	+	.	ID=gene-C9E97_RS00075;Name=C9E97_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00075;old_locus_tag=C9E97_00075
NZ_PYKA01000003.1	Protein Homology	CDS	12007	12753	.	+	0	ID=cds-WP_000669854.1;Parent=gene-C9E97_RS00075;Dbxref=GenBank:WP_000669854.1;Name=WP_000669854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461981.1;locus_tag=C9E97_RS00075;product=oxidative stress defense protein;protein_id=WP_000669854.1;transl_table=11
NZ_PYKA01000003.1	RefSeq	gene	13019	13912	.	-	.	ID=gene-C9E97_RS00085;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=C9E97_RS00085;old_locus_tag=C9E97_00085
NZ_PYKA01000003.1	Protein Homology	CDS	13019	13912	.	-	0	ID=cds-WP_000828345.1;Parent=gene-C9E97_RS00085;Dbxref=GenBank:WP_000828345.1;Name=WP_000828345.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461980.1;locus_tag=C9E97_RS00085;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_000828345.1;transl_table=11
NZ_PYKA01000003.1	RefSeq	gene	14066	14725	.	+	.	ID=gene-C9E97_RS00090;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=C9E97_RS00090;old_locus_tag=C9E97_00090
NZ_PYKA01000003.1	Protein Homology	CDS	14066	14725	.	+	0	ID=cds-WP_000189741.1;Parent=gene-C9E97_RS00090;Dbxref=GenBank:WP_000189741.1;Name=WP_000189741.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461979.1;locus_tag=C9E97_RS00090;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_000189741.1;transl_table=11
NZ_PYKA01000003.1	RefSeq	gene	14992	16224	.	+	.	ID=gene-C9E97_RS00095;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=C9E97_RS00095;old_locus_tag=C9E97_00095
NZ_PYKA01000003.1	Protein Homology	CDS	14992	16224	.	+	0	ID=cds-WP_001151627.1;Parent=gene-C9E97_RS00095;Dbxref=GenBank:WP_001151627.1;Name=WP_001151627.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461978.1;locus_tag=C9E97_RS00095;product=phosphoglycerate dehydrogenase;protein_id=WP_001151627.1;transl_table=11
NZ_PYKA01000003.1	RefSeq	gene	16605	17201	.	-	.	ID=gene-C9E97_RS00100;Name=C9E97_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00100;old_locus_tag=C9E97_00100
NZ_PYKA01000003.1	Protein Homology	CDS	16605	17201	.	-	0	ID=cds-WP_001536377.1;Parent=gene-C9E97_RS00100;Dbxref=GenBank:WP_001536377.1;Name=WP_001536377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=C9E97_RS00100;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_001536377.1;transl_table=11
NZ_PYKA01000003.1	RefSeq	gene	17222	17405	.	-	.	ID=gene-C9E97_RS00105;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=C9E97_RS00105;old_locus_tag=C9E97_00105
NZ_PYKA01000003.1	cmsearch	ncRNA	17222	17405	.	-	.	ID=rna-C9E97_RS00105;Parent=gene-C9E97_RS00105;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS00105;product=6S RNA
NZ_PYKA01000003.1	cmsearch	exon	17222	17405	.	-	.	ID=exon-C9E97_RS00105-1;Parent=rna-C9E97_RS00105;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS00105;product=6S RNA
NZ_PYKA01000003.1	RefSeq	gene	17447	17776	.	-	.	ID=gene-C9E97_RS00110;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=C9E97_RS00110;old_locus_tag=C9E97_00110
NZ_PYKA01000003.1	Protein Homology	CDS	17447	17776	.	-	0	ID=cds-WP_001276011.1;Parent=gene-C9E97_RS00110;Dbxref=GenBank:WP_001276011.1;Name=WP_001276011.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461976.1;locus_tag=C9E97_RS00110;product=cell division protein ZapA;protein_id=WP_001276011.1;transl_table=11
NZ_PYKA01000003.1	RefSeq	gene	17943	18521	.	+	.	ID=gene-C9E97_RS00115;Name=C9E97_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00115;old_locus_tag=C9E97_00120
NZ_PYKA01000003.1	Protein Homology	CDS	17943	18521	.	+	0	ID=cds-WP_000027236.1;Parent=gene-C9E97_RS00115;Dbxref=GenBank:WP_000027236.1;Name=WP_000027236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=C9E97_RS00115;product=YecA family protein;protein_id=WP_000027236.1;transl_table=11
NZ_PYKA01000003.1	RefSeq	gene	18547	19863	.	+	.	ID=gene-C9E97_RS00120;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=C9E97_RS00120;old_locus_tag=C9E97_00125
NZ_PYKA01000003.1	Protein Homology	CDS	18547	19863	.	+	0	ID=cds-WP_000193682.1;Parent=gene-C9E97_RS00120;Dbxref=GenBank:WP_000193682.1;Name=WP_000193682.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461974.1;locus_tag=C9E97_RS00120;product=Xaa-Pro aminopeptidase;protein_id=WP_000193682.1;transl_table=11
NZ_PYKA01000003.1	RefSeq	gene	19860	21038	.	+	.	ID=gene-C9E97_RS00125;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=C9E97_RS00125;old_locus_tag=C9E97_00130
NZ_PYKA01000003.1	Protein Homology	CDS	19860	21038	.	+	0	ID=cds-WP_000111140.1;Parent=gene-C9E97_RS00125;Dbxref=GenBank:WP_000111140.1;Name=WP_000111140.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461973.2;locus_tag=C9E97_RS00125;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_000111140.1;transl_table=11
NZ_PYKA01000003.1	RefSeq	gene	21164	22366	.	+	.	ID=gene-C9E97_RS00130;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=C9E97_RS00130;old_locus_tag=C9E97_00135
NZ_PYKA01000003.1	Protein Homology	CDS	21164	22366	.	+	0	ID=cds-WP_001192144.1;Parent=gene-C9E97_RS00130;Dbxref=GenBank:WP_001192144.1;Name=WP_001192144.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461972.1;locus_tag=C9E97_RS00130;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_001192144.1;transl_table=11
NZ_PYKA01000003.1	RefSeq	gene	22821	23915	.	+	.	ID=gene-C9E97_RS00135;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=C9E97_RS00135;old_locus_tag=C9E97_00140
NZ_PYKA01000003.1	Protein Homology	CDS	22821	23915	.	+	0	ID=cds-WP_000068738.1;Parent=gene-C9E97_RS00135;Dbxref=GenBank:WP_000068738.1;Name=WP_000068738.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461971.1;locus_tag=C9E97_RS00135;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_000068738.1;transl_table=11
NZ_PYKA01000003.1	RefSeq	gene	23941	24330	.	+	.	ID=gene-C9E97_RS00140;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=C9E97_RS00140;old_locus_tag=C9E97_00145
NZ_PYKA01000003.1	Protein Homology	CDS	23941	24330	.	+	0	ID=cds-WP_001295377.1;Parent=gene-C9E97_RS00140;Dbxref=GenBank:WP_001295377.1;Name=WP_001295377.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=C9E97_RS00140;product=glycine cleavage system protein GcvH;protein_id=WP_001295377.1;transl_table=11
NZ_PYKA01000003.1	RefSeq	gene	24493	27366	.	+	.	ID=gene-C9E97_RS00145;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=C9E97_RS00145;old_locus_tag=C9E97_00150
NZ_PYKA01000003.1	Protein Homology	CDS	24493	27366	.	+	0	ID=cds-WP_000194975.1;Parent=gene-C9E97_RS00145;Dbxref=GenBank:WP_000194975.1;Name=WP_000194975.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461969.1;locus_tag=C9E97_RS00145;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_000194975.1;transl_table=11
##sequence-region NZ_PYKA01000055.1 1 27047
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000055.1	RefSeq	region	1	27047	.	+	.	ID=NZ_PYKA01000055.1:1..27047;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000055.1	RefSeq	gene	212	676	.	+	.	ID=gene-C9E97_RS07470;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=C9E97_RS07470;old_locus_tag=C9E97_07645
NZ_PYKA01000055.1	Protein Homology	CDS	212	676	.	+	0	ID=cds-WP_001009173.1;Parent=gene-C9E97_RS07470;Dbxref=GenBank:WP_001009173.1;Name=WP_001009173.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=C9E97_RS07470;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_001009173.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	gene	680	964	.	-	.	ID=gene-C9E97_RS07475;Name=C9E97_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07475;old_locus_tag=C9E97_07650
NZ_PYKA01000055.1	Protein Homology	CDS	680	964	.	-	0	ID=cds-WP_000220578.1;Parent=gene-C9E97_RS07475;Dbxref=GenBank:WP_000220578.1;Name=WP_000220578.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463311.1;locus_tag=C9E97_RS07475;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_000220578.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	gene	954	1196	.	-	.	ID=gene-C9E97_RS07480;Name=C9E97_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07480;old_locus_tag=C9E97_07655
NZ_PYKA01000055.1	Protein Homology	CDS	954	1196	.	-	0	ID=cds-WP_000212724.1;Parent=gene-C9E97_RS07480;Dbxref=GenBank:WP_000212724.1;Name=WP_000212724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463310.1;locus_tag=C9E97_RS07480;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_000212724.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	gene	1274	3187	.	-	.	ID=gene-C9E97_RS07485;Name=C9E97_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07485;old_locus_tag=C9E97_07660
NZ_PYKA01000055.1	Protein Homology	CDS	1274	3187	.	-	0	ID=cds-WP_058108085.1;Parent=gene-C9E97_RS07485;Dbxref=GenBank:WP_058108085.1;Name=WP_058108085.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463309.1;locus_tag=C9E97_RS07485;product=BglG family transcription antiterminator;protein_id=WP_058108085.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	gene	3204	3944	.	-	.	ID=gene-C9E97_RS07490;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=C9E97_RS07490;old_locus_tag=C9E97_07665
NZ_PYKA01000055.1	Protein Homology	CDS	3204	3944	.	-	0	ID=cds-WP_135369739.1;Parent=gene-C9E97_RS07490;Dbxref=GenBank:WP_135369739.1;Name=WP_135369739.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463308.2;locus_tag=C9E97_RS07490;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_135369739.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	gene	3941	5059	.	-	.	ID=gene-C9E97_RS07495;Name=C9E97_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07495;old_locus_tag=C9E97_07670
NZ_PYKA01000055.1	Protein Homology	CDS	3941	5059	.	-	0	ID=cds-WP_001139171.1;Parent=gene-C9E97_RS07495;Dbxref=GenBank:WP_001139171.1;Name=WP_001139171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463307.1;locus_tag=C9E97_RS07495;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WP_001139171.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	gene	5043	6176	.	-	.	ID=gene-C9E97_RS07500;Name=C9E97_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07500;old_locus_tag=C9E97_07675
NZ_PYKA01000055.1	Protein Homology	CDS	5043	6176	.	-	0	ID=cds-WP_135369738.1;Parent=gene-C9E97_RS07500;Dbxref=GenBank:WP_135369738.1;Name=WP_135369738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463306.1;locus_tag=C9E97_RS07500;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WP_135369738.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	gene	6235	6879	.	-	.	ID=gene-C9E97_RS07505;Name=C9E97_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07505;old_locus_tag=C9E97_07680
NZ_PYKA01000055.1	Protein Homology	CDS	6235	6879	.	-	0	ID=cds-WP_000392127.1;Parent=gene-C9E97_RS07505;Dbxref=GenBank:WP_000392127.1;Name=WP_000392127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463305.1;locus_tag=C9E97_RS07505;product=DUF4310 family protein;protein_id=WP_000392127.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	gene	6891	7667	.	-	.	ID=gene-C9E97_RS07510;Name=C9E97_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07510;old_locus_tag=C9E97_07685
NZ_PYKA01000055.1	Protein Homology	CDS	6891	7667	.	-	0	ID=cds-WP_000478578.1;Parent=gene-C9E97_RS07510;Dbxref=GenBank:WP_000478578.1;Name=WP_000478578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463304.1;locus_tag=C9E97_RS07510;product=DUF4311 domain-containing protein;protein_id=WP_000478578.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	gene	7690	7992	.	-	.	ID=gene-C9E97_RS07515;Name=C9E97_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07515;old_locus_tag=C9E97_07690
NZ_PYKA01000055.1	Protein Homology	CDS	7690	7992	.	-	0	ID=cds-WP_000975187.1;Parent=gene-C9E97_RS07515;Dbxref=GenBank:WP_000975187.1;Name=WP_000975187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463303.1;locus_tag=C9E97_RS07515;product=DUF4312 family protein;protein_id=WP_000975187.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	gene	7992	8354	.	-	.	ID=gene-C9E97_RS07520;Name=C9E97_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07520;old_locus_tag=C9E97_07695
NZ_PYKA01000055.1	Protein Homology	CDS	7992	8354	.	-	0	ID=cds-WP_000435389.1;Parent=gene-C9E97_RS07520;Dbxref=GenBank:WP_000435389.1;Name=WP_000435389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463302.1;locus_tag=C9E97_RS07520;product=SFCGS family glycine-rich protein;protein_id=WP_000435389.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	gene	8365	8703	.	-	.	ID=gene-C9E97_RS07525;Name=C9E97_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07525;old_locus_tag=C9E97_07700
NZ_PYKA01000055.1	Protein Homology	CDS	8365	8703	.	-	0	ID=cds-WP_001255104.1;Parent=gene-C9E97_RS07525;Dbxref=GenBank:WP_001255104.1;Name=WP_001255104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463301.1;locus_tag=C9E97_RS07525;product=glycine dehydrogenase;protein_id=WP_001255104.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	gene	8981	9367	.	-	.	ID=gene-C9E97_RS07530;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=C9E97_RS07530;old_locus_tag=C9E97_07705
NZ_PYKA01000055.1	Protein Homology	CDS	8981	9367	.	-	0	ID=cds-WP_001232231.1;Parent=gene-C9E97_RS07530;Dbxref=GenBank:WP_001232231.1;Name=WP_001232231.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463300.1;locus_tag=C9E97_RS07530;product=cytochrome b562;protein_id=WP_001232231.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	gene	9466	10818	.	-	.	ID=gene-C9E97_RS07535;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=C9E97_RS07535;old_locus_tag=C9E97_07710
NZ_PYKA01000055.1	Protein Homology	CDS	9466	10818	.	-	0	ID=cds-WP_135369737.1;Parent=gene-C9E97_RS07535;Dbxref=GenBank:WP_135369737.1;Name=WP_135369737.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463299.1;locus_tag=C9E97_RS07535;product=metalloprotease PmbA;protein_id=WP_135369737.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	gene	10914	11465	.	+	.	ID=gene-C9E97_RS07540;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=C9E97_RS07540;old_locus_tag=C9E97_07715
NZ_PYKA01000055.1	Protein Homology	CDS	10914	11465	.	+	0	ID=cds-WP_000166287.1;Parent=gene-C9E97_RS07540;Dbxref=GenBank:WP_000166287.1;Name=WP_000166287.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463298.1;locus_tag=C9E97_RS07540;product=ribosome biogenesis factor YjgA;protein_id=WP_000166287.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	gene	11521	12405	.	-	.	ID=gene-C9E97_RS07545;Name=iolH;gbkey=Gene;gene=iolH;gene_biotype=protein_coding;locus_tag=C9E97_RS07545;old_locus_tag=C9E97_07720
NZ_PYKA01000055.1	Protein Homology	CDS	11521	12405	.	-	0	ID=cds-WP_000683955.1;Parent=gene-C9E97_RS07545;Dbxref=GenBank:WP_000683955.1;Name=WP_000683955.1;gbkey=CDS;gene=iolH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463297.1;locus_tag=C9E97_RS07545;product=sugar phosphate isomerase/epimerase IolH;protein_id=WP_000683955.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	gene	12458	13273	.	-	.	ID=gene-C9E97_RS07550;Name=iolI2;gbkey=Gene;gene=iolI2;gene_biotype=protein_coding;locus_tag=C9E97_RS07550;old_locus_tag=C9E97_07725
NZ_PYKA01000055.1	Protein Homology	CDS	12458	13273	.	-	0	ID=cds-WP_001019386.1;Parent=gene-C9E97_RS07550;Dbxref=GenBank:WP_001019386.1;Name=WP_001019386.1;gbkey=CDS;gene=iolI2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463296.1;locus_tag=C9E97_RS07550;product=2-keto-myo-inositol isomerase IolI2;protein_id=WP_001019386.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	gene	13434	14660	.	-	.	ID=gene-C9E97_RS07555;Name=C9E97_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07555;old_locus_tag=C9E97_07730
NZ_PYKA01000055.1	Protein Homology	CDS	13434	14660	.	-	0	ID=cds-WP_000661780.1;Parent=gene-C9E97_RS07555;Dbxref=GenBank:WP_000661780.1;Name=WP_000661780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463295.1;locus_tag=C9E97_RS07555;product=MFS transporter;protein_id=WP_000661780.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	gene	14733	15755	.	-	.	ID=gene-C9E97_RS07560;Name=iolG2;gbkey=Gene;gene=iolG2;gene_biotype=protein_coding;locus_tag=C9E97_RS07560;old_locus_tag=C9E97_07735
NZ_PYKA01000055.1	Protein Homology	CDS	14733	15755	.	-	0	ID=cds-WP_000736098.1;Parent=gene-C9E97_RS07560;Dbxref=GenBank:WP_000736098.1;Name=WP_000736098.1;gbkey=CDS;gene=iolG2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463294.1;locus_tag=C9E97_RS07560;product=D-chiro-inositol-2-dehydrogenase IolG2;protein_id=WP_000736098.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	gene	15936	17876	.	-	.	ID=gene-C9E97_RS07565;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=protein_coding;locus_tag=C9E97_RS07565;old_locus_tag=C9E97_07740
NZ_PYKA01000055.1	Protein Homology	CDS	15936	17876	.	-	0	ID=cds-WP_000849477.1;Parent=gene-C9E97_RS07565;Dbxref=GenBank:WP_000849477.1;Name=WP_000849477.1;Ontology_term=GO:0019310,GO:0016823,GO:0030976;gbkey=CDS;gene=iolD;go_function=hydrolase activity%2C acting on acid carbon-carbon bonds%2C in ketonic substances|0016823||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453702.1;locus_tag=C9E97_RS07565;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);protein_id=WP_000849477.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	gene	18293	20230	.	+	.	ID=gene-C9E97_RS07570;Name=C9E97_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07570;old_locus_tag=C9E97_07745
NZ_PYKA01000055.1	Protein Homology	CDS	18293	20230	.	+	0	ID=cds-WP_135369225.1;Parent=gene-C9E97_RS07570;Dbxref=GenBank:WP_135369225.1;Name=WP_135369225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453701.1;locus_tag=C9E97_RS07570;product=bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2-deoxyphosphogluconate aldolase;protein_id=WP_135369225.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	gene	20291	21457	.	+	.	ID=gene-C9E97_RS07575;Name=C9E97_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07575;old_locus_tag=C9E97_07750
NZ_PYKA01000055.1	Protein Homology	CDS	20291	21457	.	+	0	ID=cds-WP_001111174.1;Parent=gene-C9E97_RS07575;Dbxref=GenBank:WP_001111174.1;Name=WP_001111174.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463289.1;locus_tag=C9E97_RS07575;product=MFS transporter;protein_id=WP_001111174.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	gene	21454	22287	.	-	.	ID=gene-C9E97_RS07580;Name=iolI1;gbkey=Gene;gene=iolI1;gene_biotype=protein_coding;locus_tag=C9E97_RS07580;old_locus_tag=C9E97_07755
NZ_PYKA01000055.1	Protein Homology	CDS	21454	22287	.	-	0	ID=cds-WP_023224154.1;Parent=gene-C9E97_RS07580;Dbxref=GenBank:WP_023224154.1;Name=WP_023224154.1;gbkey=CDS;gene=iolI1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463288.1;locus_tag=C9E97_RS07580;product=2-keto-myo-inositol isomerase IolI1;protein_id=WP_023224154.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	gene	22288	23631	.	-	.	ID=gene-C9E97_RS07585;Name=srfJ;gbkey=Gene;gene=srfJ;gene_biotype=protein_coding;locus_tag=C9E97_RS07585;old_locus_tag=C9E97_07760
NZ_PYKA01000055.1	Protein Homology	CDS	22288	23631	.	-	0	ID=cds-WP_000678388.1;Parent=gene-C9E97_RS07585;Dbxref=GenBank:WP_000678388.1;Name=WP_000678388.1;gbkey=CDS;gene=srfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463287.1;locus_tag=C9E97_RS07585;product=lysosomal glucosyl ceramidase-like type III secretion effector SrfJ;protein_id=WP_000678388.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	gene	23729	24739	.	-	.	ID=gene-C9E97_RS07590;Name=iolG1;gbkey=Gene;gene=iolG1;gene_biotype=protein_coding;locus_tag=C9E97_RS07590;old_locus_tag=C9E97_07765
NZ_PYKA01000055.1	Protein Homology	CDS	23729	24739	.	-	0	ID=cds-WP_000172704.1;Parent=gene-C9E97_RS07590;Dbxref=GenBank:WP_000172704.1;Name=WP_000172704.1;gbkey=CDS;gene=iolG1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463286.1;locus_tag=C9E97_RS07590;product=inositol 2-dehydrogenase IolG1;protein_id=WP_000172704.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	gene	24758	25678	.	-	.	ID=gene-C9E97_RS07595;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=C9E97_RS07595;old_locus_tag=C9E97_07770
NZ_PYKA01000055.1	Protein Homology	CDS	24758	25678	.	-	0	ID=cds-WP_012601329.1;Parent=gene-C9E97_RS07595;Dbxref=GenBank:WP_012601329.1;Name=WP_012601329.1;Ontology_term=GO:0019310,GO:0050114;gbkey=CDS;gene=iolE;go_function=myo-inosose-2 dehydratase activity|0050114||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463285.3;locus_tag=C9E97_RS07595;product=myo-inosose-2 dehydratase;protein_id=WP_012601329.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	gene	25938	26762	.	-	.	ID=gene-C9E97_RS07600;Name=reiD;gbkey=Gene;gene=reiD;gene_biotype=protein_coding;locus_tag=C9E97_RS07600;old_locus_tag=C9E97_07775
NZ_PYKA01000055.1	Protein Homology	CDS	25938	26762	.	-	0	ID=cds-WP_000332219.1;Parent=gene-C9E97_RS07600;Dbxref=GenBank:WP_000332219.1;Name=WP_000332219.1;gbkey=CDS;gene=reiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000332219.1;locus_tag=C9E97_RS07600;product=myo-inositol utilization transcriptional regulator ReiD;protein_id=WP_000332219.1;transl_table=11
NZ_PYKA01000055.1	RefSeq	pseudogene	26885	27019	.	+	.	ID=gene-C9E97_RS23690;Name=C9E97_RS23690;end_range=27019,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23690;partial=true;pseudo=true
NZ_PYKA01000055.1	Protein Homology	CDS	26885	27019	.	+	0	ID=cds-C9E97_RS23690;Parent=gene-C9E97_RS23690;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=27019,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453693.1;locus_tag=C9E97_RS23690;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKA01000106.1 1 26108
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000106.1	RefSeq	region	1	26108	.	+	.	ID=NZ_PYKA01000106.1:1..26108;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000106.1	RefSeq	gene	247	441	.	+	.	ID=gene-C9E97_RS14490;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=C9E97_RS14490;old_locus_tag=C9E97_14810
NZ_PYKA01000106.1	Protein Homology	CDS	247	441	.	+	0	ID=cds-WP_000289082.1;Parent=gene-C9E97_RS14490;Dbxref=GenBank:WP_000289082.1;Name=WP_000289082.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462348.1;locus_tag=C9E97_RS14490;product=bacterioferritin-associated ferredoxin;protein_id=WP_000289082.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	514	990	.	+	.	ID=gene-C9E97_RS14495;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=C9E97_RS14495;old_locus_tag=C9E97_14815
NZ_PYKA01000106.1	Protein Homology	CDS	514	990	.	+	0	ID=cds-WP_000675530.1;Parent=gene-C9E97_RS14495;Dbxref=GenBank:WP_000675530.1;Name=WP_000675530.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462347.1;locus_tag=C9E97_RS14495;product=bacterioferritin;protein_id=WP_000675530.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	987	1454	.	-	.	ID=gene-C9E97_RS14500;Name=hopD;gbkey=Gene;gene=hopD;gene_biotype=protein_coding;locus_tag=C9E97_RS14500;old_locus_tag=C9E97_14820
NZ_PYKA01000106.1	Protein Homology	CDS	987	1454	.	-	0	ID=cds-WP_135369090.1;Parent=gene-C9E97_RS14500;Dbxref=GenBank:WP_135369090.1;Name=WP_135369090.1;gbkey=CDS;gene=hopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462346.1;locus_tag=C9E97_RS14500;product=prepilin peptidase;protein_id=WP_135369090.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	1834	2145	.	+	.	ID=gene-C9E97_RS14505;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=C9E97_RS14505;old_locus_tag=C9E97_14830
NZ_PYKA01000106.1	Protein Homology	CDS	1834	2145	.	+	0	ID=cds-WP_001181005.1;Parent=gene-C9E97_RS14505;Dbxref=GenBank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=C9E97_RS14505;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	2178	2807	.	+	.	ID=gene-C9E97_RS14510;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=C9E97_RS14510;old_locus_tag=C9E97_14835
NZ_PYKA01000106.1	Protein Homology	CDS	2178	2807	.	+	0	ID=cds-WP_000579838.1;Parent=gene-C9E97_RS14510;Dbxref=GenBank:WP_000579838.1;Name=WP_000579838.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=C9E97_RS14510;product=50S ribosomal protein L3;protein_id=WP_000579838.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	2818	3423	.	+	.	ID=gene-C9E97_RS14515;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=C9E97_RS14515;old_locus_tag=C9E97_14840
NZ_PYKA01000106.1	Protein Homology	CDS	2818	3423	.	+	0	ID=cds-WP_000424395.1;Parent=gene-C9E97_RS14515;Dbxref=GenBank:WP_000424395.1;Name=WP_000424395.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=C9E97_RS14515;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	3420	3722	.	+	.	ID=gene-C9E97_RS14520;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=C9E97_RS14520;old_locus_tag=C9E97_14845
NZ_PYKA01000106.1	Protein Homology	CDS	3420	3722	.	+	0	ID=cds-WP_000617546.1;Parent=gene-C9E97_RS14520;Dbxref=GenBank:WP_000617546.1;Name=WP_000617546.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=C9E97_RS14520;product=50S ribosomal protein L23;protein_id=WP_000617546.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	3740	4561	.	+	.	ID=gene-C9E97_RS14525;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=C9E97_RS14525;old_locus_tag=C9E97_14850
NZ_PYKA01000106.1	Protein Homology	CDS	3740	4561	.	+	0	ID=cds-WP_000301869.1;Parent=gene-C9E97_RS14525;Dbxref=GenBank:WP_000301869.1;Name=WP_000301869.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=C9E97_RS14525;product=50S ribosomal protein L2;protein_id=WP_000301869.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	4578	4856	.	+	.	ID=gene-C9E97_RS14530;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=C9E97_RS14530;old_locus_tag=C9E97_14855
NZ_PYKA01000106.1	Protein Homology	CDS	4578	4856	.	+	0	ID=cds-WP_001138115.1;Parent=gene-C9E97_RS14530;Dbxref=GenBank:WP_001138115.1;Name=WP_001138115.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=C9E97_RS14530;product=30S ribosomal protein S19;protein_id=WP_001138115.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	4871	5203	.	+	.	ID=gene-C9E97_RS14535;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=C9E97_RS14535;old_locus_tag=C9E97_14860
NZ_PYKA01000106.1	Protein Homology	CDS	4871	5203	.	+	0	ID=cds-WP_000447529.1;Parent=gene-C9E97_RS14535;Dbxref=GenBank:WP_000447529.1;Name=WP_000447529.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=C9E97_RS14535;product=50S ribosomal protein L22;protein_id=WP_000447529.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	5221	5922	.	+	.	ID=gene-C9E97_RS14540;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=C9E97_RS14540;old_locus_tag=C9E97_14865
NZ_PYKA01000106.1	Protein Homology	CDS	5221	5922	.	+	0	ID=cds-WP_000529945.1;Parent=gene-C9E97_RS14540;Dbxref=GenBank:WP_000529945.1;Name=WP_000529945.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=C9E97_RS14540;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	5935	6345	.	+	.	ID=gene-C9E97_RS14545;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=C9E97_RS14545;old_locus_tag=C9E97_14870
NZ_PYKA01000106.1	Protein Homology	CDS	5935	6345	.	+	0	ID=cds-WP_000941208.1;Parent=gene-C9E97_RS14545;Dbxref=GenBank:WP_000941208.1;Name=WP_000941208.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=C9E97_RS14545;product=50S ribosomal protein L16;protein_id=WP_000941208.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	6345	6536	.	+	.	ID=gene-C9E97_RS14550;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=C9E97_RS14550;old_locus_tag=C9E97_14875
NZ_PYKA01000106.1	Protein Homology	CDS	6345	6536	.	+	0	ID=cds-WP_000644742.1;Parent=gene-C9E97_RS14550;Dbxref=GenBank:WP_000644742.1;Name=WP_000644742.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=C9E97_RS14550;product=50S ribosomal protein L29;protein_id=WP_000644742.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	6536	6790	.	+	.	ID=gene-C9E97_RS14555;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=C9E97_RS14555;old_locus_tag=C9E97_14880
NZ_PYKA01000106.1	Protein Homology	CDS	6536	6790	.	+	0	ID=cds-WP_000130101.1;Parent=gene-C9E97_RS14555;Dbxref=GenBank:WP_000130101.1;Name=WP_000130101.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=C9E97_RS14555;product=30S ribosomal protein S17;protein_id=WP_000130101.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	6954	7325	.	+	.	ID=gene-C9E97_RS14560;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=C9E97_RS14560;old_locus_tag=C9E97_14885
NZ_PYKA01000106.1	Protein Homology	CDS	6954	7325	.	+	0	ID=cds-WP_000613954.1;Parent=gene-C9E97_RS14560;Dbxref=GenBank:WP_000613954.1;Name=WP_000613954.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=C9E97_RS14560;product=50S ribosomal protein L14;protein_id=WP_000613954.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	7336	7650	.	+	.	ID=gene-C9E97_RS14565;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=C9E97_RS14565;old_locus_tag=C9E97_14890
NZ_PYKA01000106.1	Protein Homology	CDS	7336	7650	.	+	0	ID=cds-WP_000729185.1;Parent=gene-C9E97_RS14565;Dbxref=GenBank:WP_000729185.1;Name=WP_000729185.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=C9E97_RS14565;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	7665	8204	.	+	.	ID=gene-C9E97_RS14570;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=C9E97_RS14570;old_locus_tag=C9E97_14895
NZ_PYKA01000106.1	Protein Homology	CDS	7665	8204	.	+	0	ID=cds-WP_001096206.1;Parent=gene-C9E97_RS14570;Dbxref=GenBank:WP_001096206.1;Name=WP_001096206.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=C9E97_RS14570;product=50S ribosomal protein L5;protein_id=WP_001096206.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	8219	8524	.	+	.	ID=gene-C9E97_RS14575;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=C9E97_RS14575;old_locus_tag=C9E97_14900
NZ_PYKA01000106.1	Protein Homology	CDS	8219	8524	.	+	0	ID=cds-WP_001118932.1;Parent=gene-C9E97_RS14575;Dbxref=GenBank:WP_001118932.1;Name=WP_001118932.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=C9E97_RS14575;product=30S ribosomal protein S14;protein_id=WP_001118932.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	8558	8950	.	+	.	ID=gene-C9E97_RS14580;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=C9E97_RS14580;old_locus_tag=C9E97_14905
NZ_PYKA01000106.1	Protein Homology	CDS	8558	8950	.	+	0	ID=cds-WP_000062611.1;Parent=gene-C9E97_RS14580;Dbxref=GenBank:WP_000062611.1;Name=WP_000062611.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=C9E97_RS14580;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	8963	9496	.	+	.	ID=gene-C9E97_RS14585;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=C9E97_RS14585;old_locus_tag=C9E97_14910
NZ_PYKA01000106.1	Protein Homology	CDS	8963	9496	.	+	0	ID=cds-WP_000091939.1;Parent=gene-C9E97_RS14585;Dbxref=GenBank:WP_000091939.1;Name=WP_000091939.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=C9E97_RS14585;product=50S ribosomal protein L6;protein_id=WP_000091939.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	9506	9859	.	+	.	ID=gene-C9E97_RS14590;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=C9E97_RS14590;old_locus_tag=C9E97_14915
NZ_PYKA01000106.1	Protein Homology	CDS	9506	9859	.	+	0	ID=cds-WP_000358956.1;Parent=gene-C9E97_RS14590;Dbxref=GenBank:WP_000358956.1;Name=WP_000358956.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=C9E97_RS14590;product=50S ribosomal protein L18;protein_id=WP_000358956.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	9874	10377	.	+	.	ID=gene-C9E97_RS14595;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=C9E97_RS14595;old_locus_tag=C9E97_14920
NZ_PYKA01000106.1	Protein Homology	CDS	9874	10377	.	+	0	ID=cds-WP_000940121.1;Parent=gene-C9E97_RS14595;Dbxref=GenBank:WP_000940121.1;Name=WP_000940121.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=C9E97_RS14595;product=30S ribosomal protein S5;protein_id=WP_000940121.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	10381	10560	.	+	.	ID=gene-C9E97_RS14600;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=C9E97_RS14600;old_locus_tag=C9E97_14925
NZ_PYKA01000106.1	Protein Homology	CDS	10381	10560	.	+	0	ID=cds-WP_001140434.1;Parent=gene-C9E97_RS14600;Dbxref=GenBank:WP_001140434.1;Name=WP_001140434.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=C9E97_RS14600;product=50S ribosomal protein L30;protein_id=WP_001140434.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	10564	10998	.	+	.	ID=gene-C9E97_RS14605;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=C9E97_RS14605;old_locus_tag=C9E97_14930
NZ_PYKA01000106.1	Protein Homology	CDS	10564	10998	.	+	0	ID=cds-WP_001238917.1;Parent=gene-C9E97_RS14605;Dbxref=GenBank:WP_001238917.1;Name=WP_001238917.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=C9E97_RS14605;product=50S ribosomal protein L15;protein_id=WP_001238917.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	11006	12337	.	+	.	ID=gene-C9E97_RS14610;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=C9E97_RS14610;old_locus_tag=C9E97_14935
NZ_PYKA01000106.1	Protein Homology	CDS	11006	12337	.	+	0	ID=cds-WP_001118864.1;Parent=gene-C9E97_RS14610;Dbxref=GenBank:WP_001118864.1;Name=WP_001118864.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=C9E97_RS14610;product=preprotein translocase subunit SecY;protein_id=WP_001118864.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	12369	12485	.	+	.	ID=gene-C9E97_RS14615;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=C9E97_RS14615;old_locus_tag=C9E97_14940
NZ_PYKA01000106.1	Protein Homology	CDS	12369	12485	.	+	0	ID=cds-WP_000868187.1;Parent=gene-C9E97_RS14615;Dbxref=GenBank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=C9E97_RS14615;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	12632	12988	.	+	.	ID=gene-C9E97_RS14620;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=C9E97_RS14620;old_locus_tag=C9E97_14945
NZ_PYKA01000106.1	Protein Homology	CDS	12632	12988	.	+	0	ID=cds-WP_000090780.1;Parent=gene-C9E97_RS14620;Dbxref=GenBank:WP_000090780.1;Name=WP_000090780.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=C9E97_RS14620;product=30S ribosomal protein S13;protein_id=WP_000090780.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	13005	13394	.	+	.	ID=gene-C9E97_RS14625;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=C9E97_RS14625;old_locus_tag=C9E97_14950
NZ_PYKA01000106.1	Protein Homology	CDS	13005	13394	.	+	0	ID=cds-WP_001029758.1;Parent=gene-C9E97_RS14625;Dbxref=GenBank:WP_001029758.1;Name=WP_001029758.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=C9E97_RS14625;product=30S ribosomal protein S11;protein_id=WP_001029758.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	13428	14048	.	+	.	ID=gene-C9E97_RS14630;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=C9E97_RS14630;old_locus_tag=C9E97_14955
NZ_PYKA01000106.1	Protein Homology	CDS	13428	14048	.	+	0	ID=cds-WP_000135226.1;Parent=gene-C9E97_RS14630;Dbxref=GenBank:WP_000135226.1;Name=WP_000135226.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=C9E97_RS14630;product=30S ribosomal protein S4;protein_id=WP_000135226.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	14074	15063	.	+	.	ID=gene-C9E97_RS14635;Name=C9E97_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14635;old_locus_tag=C9E97_14960
NZ_PYKA01000106.1	Protein Homology	CDS	14074	15063	.	+	0	ID=cds-WP_001162094.1;Parent=gene-C9E97_RS14635;Dbxref=GenBank:WP_001162094.1;Name=WP_001162094.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=C9E97_RS14635;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	15104	15487	.	+	.	ID=gene-C9E97_RS14640;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=C9E97_RS14640;old_locus_tag=C9E97_14965
NZ_PYKA01000106.1	Protein Homology	CDS	15104	15487	.	+	0	ID=cds-WP_001216370.1;Parent=gene-C9E97_RS14640;Dbxref=GenBank:WP_001216370.1;Name=WP_001216370.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462318.1;locus_tag=C9E97_RS14640;product=50S ribosomal protein L17;protein_id=WP_001216370.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	15595	15963	.	+	.	ID=gene-C9E97_RS14645;Name=C9E97_RS14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14645;old_locus_tag=C9E97_14970
NZ_PYKA01000106.1	Protein Homology	CDS	15595	15963	.	+	0	ID=cds-WP_000266515.1;Parent=gene-C9E97_RS14645;Dbxref=GenBank:WP_000266515.1;Name=WP_000266515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462317.1;locus_tag=C9E97_RS14645;product=DUF1992 domain-containing protein;protein_id=WP_000266515.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	15974	16399	.	+	.	ID=gene-C9E97_RS14650;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=C9E97_RS14650;old_locus_tag=C9E97_14975
NZ_PYKA01000106.1	Protein Homology	CDS	15974	16399	.	+	0	ID=cds-WP_000285585.1;Parent=gene-C9E97_RS14650;Dbxref=GenBank:WP_000285585.1;Name=WP_000285585.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462316.1;locus_tag=C9E97_RS14650;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_000285585.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	pseudogene	16457	16660	.	+	.	ID=gene-C9E97_RS14655;Name=C9E97_RS14655;end_range=16660,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS14655;old_locus_tag=C9E97_14980;partial=true;pseudo=true
NZ_PYKA01000106.1	Protein Homology	CDS	16457	16660	.	+	0	ID=cds-C9E97_RS14655;Parent=gene-C9E97_RS14655;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=16660,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588467.1;locus_tag=C9E97_RS14655;partial=true;product=alternative ribosome-rescue factor A;pseudo=true;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	16662	17075	.	-	.	ID=gene-C9E97_RS14660;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=C9E97_RS14660;old_locus_tag=C9E97_14985
NZ_PYKA01000106.1	Protein Homology	CDS	16662	17075	.	-	0	ID=cds-WP_000008119.1;Parent=gene-C9E97_RS14660;Dbxref=GenBank:WP_000008119.1;Name=WP_000008119.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462314.1;locus_tag=C9E97_RS14660;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_000008119.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	17217	18593	.	-	.	ID=gene-C9E97_RS14665;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=C9E97_RS14665;old_locus_tag=C9E97_14990
NZ_PYKA01000106.1	Protein Homology	CDS	17217	18593	.	-	0	ID=cds-WP_000691374.1;Parent=gene-C9E97_RS14665;Dbxref=GenBank:WP_000691374.1;Name=WP_000691374.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=C9E97_RS14665;product=Trk system potassium transporter TrkA;protein_id=WP_000691374.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	18615	19904	.	-	.	ID=gene-C9E97_RS14670;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=C9E97_RS14670;old_locus_tag=C9E97_14995
NZ_PYKA01000106.1	Protein Homology	CDS	18615	19904	.	-	0	ID=cds-WP_135369089.1;Parent=gene-C9E97_RS14670;Dbxref=GenBank:WP_135369089.1;Name=WP_135369089.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462312.1;locus_tag=C9E97_RS14670;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_135369089.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	19956	20903	.	-	.	ID=gene-C9E97_RS14675;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=C9E97_RS14675;old_locus_tag=C9E97_15000
NZ_PYKA01000106.1	Protein Homology	CDS	19956	20903	.	-	0	ID=cds-WP_135369088.1;Parent=gene-C9E97_RS14675;Dbxref=GenBank:WP_135369088.1;Name=WP_135369088.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462311.1;locus_tag=C9E97_RS14675;product=methionyl-tRNA formyltransferase;protein_id=WP_135369088.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	20919	21428	.	-	.	ID=gene-C9E97_RS14680;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=C9E97_RS14680;old_locus_tag=C9E97_15005
NZ_PYKA01000106.1	Protein Homology	CDS	20919	21428	.	-	0	ID=cds-WP_000114987.1;Parent=gene-C9E97_RS14680;Dbxref=GenBank:WP_000114987.1;Name=WP_000114987.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462310.1;locus_tag=C9E97_RS14680;product=peptide deformylase;protein_id=WP_000114987.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	21560	22684	.	+	.	ID=gene-C9E97_RS14685;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=C9E97_RS14685;old_locus_tag=C9E97_15010
NZ_PYKA01000106.1	Protein Homology	CDS	21560	22684	.	+	0	ID=cds-WP_135369087.1;Parent=gene-C9E97_RS14685;Dbxref=GenBank:WP_135369087.1;Name=WP_135369087.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462309.1;locus_tag=C9E97_RS14685;product=DNA-protecting protein DprA;protein_id=WP_135369087.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	22656	23129	.	+	.	ID=gene-C9E97_RS14690;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=C9E97_RS14690;old_locus_tag=C9E97_15015
NZ_PYKA01000106.1	Protein Homology	CDS	22656	23129	.	+	0	ID=cds-WP_000460663.1;Parent=gene-C9E97_RS14690;Dbxref=GenBank:WP_000460663.1;Name=WP_000460663.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=C9E97_RS14690;product=DUF494 family protein Smg;protein_id=WP_000460663.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	23156	23698	.	+	.	ID=gene-C9E97_RS14695;Name=C9E97_RS14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14695;old_locus_tag=C9E97_15020
NZ_PYKA01000106.1	Protein Homology	CDS	23156	23698	.	+	0	ID=cds-WP_135369086.1;Parent=gene-C9E97_RS14695;Dbxref=GenBank:WP_135369086.1;Name=WP_135369086.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462307.1;locus_tag=C9E97_RS14695;product=DNA topoisomerase family protein;protein_id=WP_135369086.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	23703	24275	.	+	.	ID=gene-C9E97_RS14700;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=C9E97_RS14700;old_locus_tag=C9E97_15025
NZ_PYKA01000106.1	Protein Homology	CDS	23703	24275	.	+	0	ID=cds-WP_135369085.1;Parent=gene-C9E97_RS14700;Dbxref=GenBank:WP_135369085.1;Name=WP_135369085.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462306.1;locus_tag=C9E97_RS14700;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_135369085.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	24280	25098	.	+	.	ID=gene-C9E97_RS14705;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=C9E97_RS14705;old_locus_tag=C9E97_15030
NZ_PYKA01000106.1	Protein Homology	CDS	24280	25098	.	+	0	ID=cds-WP_000451205.1;Parent=gene-C9E97_RS14705;Dbxref=GenBank:WP_000451205.1;Name=WP_000451205.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462305.1;locus_tag=C9E97_RS14705;product=shikimate dehydrogenase;protein_id=WP_000451205.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	25095	25352	.	+	.	ID=gene-C9E97_RS14710;Name=C9E97_RS14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14710;old_locus_tag=C9E97_15035
NZ_PYKA01000106.1	Protein Homology	CDS	25095	25352	.	+	0	ID=cds-WP_001070576.1;Parent=gene-C9E97_RS14710;Dbxref=GenBank:WP_001070576.1;Name=WP_001070576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462304.1;locus_tag=C9E97_RS14710;product=DUF1488 domain-containing protein;protein_id=WP_001070576.1;transl_table=11
NZ_PYKA01000106.1	RefSeq	gene	25328	25882	.	-	.	ID=gene-C9E97_RS14715;Name=C9E97_RS14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14715;old_locus_tag=C9E97_15040
NZ_PYKA01000106.1	Protein Homology	CDS	25328	25882	.	-	0	ID=cds-WP_061380289.1;Parent=gene-C9E97_RS14715;Dbxref=GenBank:WP_061380289.1;Name=WP_061380289.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462303.1;locus_tag=C9E97_RS14715;product=gamma carbonic anhydrase family protein;protein_id=WP_061380289.1;transl_table=11
##sequence-region NZ_PYKA01000084.1 1 26018
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000084.1	RefSeq	region	1	26018	.	+	.	ID=NZ_PYKA01000084.1:1..26018;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000084.1	RefSeq	gene	169	870	.	-	.	ID=gene-C9E97_RS11705;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=C9E97_RS11705;old_locus_tag=C9E97_11975
NZ_PYKA01000084.1	Protein Homology	CDS	169	870	.	-	0	ID=cds-WP_000209831.1;Parent=gene-C9E97_RS11705;Dbxref=GenBank:WP_000209831.1;Name=WP_000209831.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462864.1;locus_tag=C9E97_RS11705;product=NAD(P)H-flavin reductase;protein_id=WP_000209831.1;transl_table=11
NZ_PYKA01000084.1	RefSeq	gene	956	2434	.	-	.	ID=gene-C9E97_RS11710;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=C9E97_RS11710;old_locus_tag=C9E97_11980
NZ_PYKA01000084.1	Protein Homology	CDS	956	2434	.	-	0	ID=cds-WP_000339764.1;Parent=gene-C9E97_RS11710;Dbxref=GenBank:WP_000339764.1;Name=WP_000339764.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462863.1;locus_tag=C9E97_RS11710;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_000339764.1;transl_table=11
NZ_PYKA01000084.1	RefSeq	gene	2620	3108	.	+	.	ID=gene-C9E97_RS11715;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=C9E97_RS11715;old_locus_tag=C9E97_11985
NZ_PYKA01000084.1	Protein Homology	CDS	2620	3108	.	+	0	ID=cds-WP_001192410.1;Parent=gene-C9E97_RS11715;Dbxref=GenBank:WP_001192410.1;Name=WP_001192410.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462862.1;locus_tag=C9E97_RS11715;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_001192410.1;transl_table=11
NZ_PYKA01000084.1	RefSeq	gene	3116	3898	.	-	.	ID=gene-C9E97_RS11720;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=C9E97_RS11720;old_locus_tag=C9E97_11990
NZ_PYKA01000084.1	Protein Homology	CDS	3116	3898	.	-	0	ID=cds-WP_000459653.1;Parent=gene-C9E97_RS11720;Dbxref=GenBank:WP_000459653.1;Name=WP_000459653.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462861.3;locus_tag=C9E97_RS11720;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_000459653.1;transl_table=11
NZ_PYKA01000084.1	RefSeq	gene	3940	4719	.	-	.	ID=gene-C9E97_RS11725;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=C9E97_RS11725;old_locus_tag=C9E97_11995
NZ_PYKA01000084.1	Protein Homology	CDS	3940	4719	.	-	0	ID=cds-WP_000257554.1;Parent=gene-C9E97_RS11725;Dbxref=GenBank:WP_000257554.1;Name=WP_000257554.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462860.1;locus_tag=C9E97_RS11725;product=Sec-independent protein translocase subunit TatC;protein_id=WP_000257554.1;transl_table=11
NZ_PYKA01000084.1	RefSeq	gene	4722	5270	.	-	.	ID=gene-C9E97_RS11730;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=C9E97_RS11730;old_locus_tag=C9E97_12000
NZ_PYKA01000084.1	Protein Homology	CDS	4722	5270	.	-	0	ID=cds-WP_000459612.1;Parent=gene-C9E97_RS11730;Dbxref=GenBank:WP_000459612.1;Name=WP_000459612.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462859.1;locus_tag=C9E97_RS11730;product=Sec-independent protein translocase protein TatB;protein_id=WP_000459612.1;transl_table=11
NZ_PYKA01000084.1	RefSeq	gene	5274	5528	.	-	.	ID=gene-C9E97_RS11735;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=C9E97_RS11735;old_locus_tag=C9E97_12005
NZ_PYKA01000084.1	Protein Homology	CDS	5274	5528	.	-	0	ID=cds-WP_000508972.1;Parent=gene-C9E97_RS11735;Dbxref=GenBank:WP_000508972.1;Name=WP_000508972.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462858.1;locus_tag=C9E97_RS11735;product=Sec-independent protein translocase subunit TatA;protein_id=WP_000508972.1;transl_table=11
NZ_PYKA01000084.1	RefSeq	gene	5734	7374	.	-	.	ID=gene-C9E97_RS11740;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=C9E97_RS11740;old_locus_tag=C9E97_12010
NZ_PYKA01000084.1	Protein Homology	CDS	5734	7374	.	-	0	ID=cds-WP_000187559.1;Parent=gene-C9E97_RS11740;Dbxref=GenBank:WP_000187559.1;Name=WP_000187559.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462857.1;locus_tag=C9E97_RS11740;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_000187559.1;transl_table=11
NZ_PYKA01000084.1	RefSeq	gene	7371	7976	.	-	.	ID=gene-C9E97_RS11745;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=C9E97_RS11745;old_locus_tag=C9E97_12015
NZ_PYKA01000084.1	Protein Homology	CDS	7371	7976	.	-	0	ID=cds-WP_064012925.1;Parent=gene-C9E97_RS11745;Dbxref=GenBank:WP_064012925.1;Name=WP_064012925.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462856.1;locus_tag=C9E97_RS11745;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_064012925.1;transl_table=11
NZ_PYKA01000084.1	RefSeq	gene	7986	8741	.	-	.	ID=gene-C9E97_RS11750;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=C9E97_RS11750;old_locus_tag=C9E97_12020
NZ_PYKA01000084.1	Protein Homology	CDS	7986	8741	.	-	0	ID=cds-WP_000229009.1;Parent=gene-C9E97_RS11750;Dbxref=GenBank:WP_000229009.1;Name=WP_000229009.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462855.1;locus_tag=C9E97_RS11750;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_000229009.1;transl_table=11
NZ_PYKA01000084.1	RefSeq	gene	8837	10267	.	-	.	ID=gene-C9E97_RS11755;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=C9E97_RS11755;old_locus_tag=C9E97_12025
NZ_PYKA01000084.1	Protein Homology	CDS	8837	10267	.	-	0	ID=cds-WP_000355562.1;Parent=gene-C9E97_RS11755;Dbxref=GenBank:WP_000355562.1;Name=WP_000355562.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462854.1;locus_tag=C9E97_RS11755;product=DNA recombination protein RmuC;protein_id=WP_000355562.1;transl_table=11
NZ_PYKA01000084.1	RefSeq	gene	10407	11168	.	-	.	ID=gene-C9E97_RS11760;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=C9E97_RS11760;old_locus_tag=C9E97_12030
NZ_PYKA01000084.1	Protein Homology	CDS	10407	11168	.	-	0	ID=cds-WP_000045169.1;Parent=gene-C9E97_RS11760;Dbxref=GenBank:WP_000045169.1;Name=WP_000045169.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462853.1;locus_tag=C9E97_RS11760;product=uridine phosphorylase;protein_id=WP_000045169.1;transl_table=11
NZ_PYKA01000084.1	RefSeq	gene	11427	12239	.	+	.	ID=gene-C9E97_RS11765;Name=C9E97_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11765;old_locus_tag=C9E97_12035
NZ_PYKA01000084.1	Protein Homology	CDS	11427	12239	.	+	0	ID=cds-WP_000213959.1;Parent=gene-C9E97_RS11765;Dbxref=GenBank:WP_000213959.1;Name=WP_000213959.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462852.1;locus_tag=C9E97_RS11765;product=dienelactone hydrolase family protein;protein_id=WP_000213959.1;transl_table=11
NZ_PYKA01000084.1	RefSeq	gene	12319	13662	.	-	.	ID=gene-C9E97_RS11770;Name=C9E97_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11770;old_locus_tag=C9E97_12040
NZ_PYKA01000084.1	Protein Homology	CDS	12319	13662	.	-	0	ID=cds-WP_000017952.1;Parent=gene-C9E97_RS11770;Dbxref=GenBank:WP_000017952.1;Name=WP_000017952.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462851.1;locus_tag=C9E97_RS11770;product=anaerobic sulfatase maturase;protein_id=WP_000017952.1;transl_table=11
NZ_PYKA01000084.1	RefSeq	gene	13986	16250	.	-	.	ID=gene-C9E97_RS11775;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=C9E97_RS11775;old_locus_tag=C9E97_12045
NZ_PYKA01000084.1	Protein Homology	CDS	13986	16250	.	-	0	ID=cds-WP_135369281.1;Parent=gene-C9E97_RS11775;Dbxref=GenBank:WP_135369281.1;Name=WP_135369281.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462850.1;locus_tag=C9E97_RS11775;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_135369281.1;transl_table=11
NZ_PYKA01000084.1	RefSeq	gene	16499	17452	.	+	.	ID=gene-C9E97_RS11780;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=C9E97_RS11780;old_locus_tag=C9E97_12050
NZ_PYKA01000084.1	Protein Homology	CDS	16499	17452	.	+	0	ID=cds-WP_000569786.1;Parent=gene-C9E97_RS11780;Dbxref=GenBank:WP_000569786.1;Name=WP_000569786.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462849.1;locus_tag=C9E97_RS11780;product=HTH-type transcriptional regulator MetR;protein_id=WP_000569786.1;transl_table=11
NZ_PYKA01000084.1	RefSeq	gene	17340	18239	.	-	.	ID=gene-C9E97_RS11785;Name=C9E97_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11785;old_locus_tag=C9E97_12055
NZ_PYKA01000084.1	Protein Homology	CDS	17340	18239	.	-	0	ID=cds-WP_001196254.1;Parent=gene-C9E97_RS11785;Dbxref=GenBank:WP_001196254.1;Name=WP_001196254.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462848.1;locus_tag=C9E97_RS11785;product=carboxylate/amino acid/amine transporter;protein_id=WP_001196254.1;transl_table=11
NZ_PYKA01000084.1	RefSeq	gene	18320	19120	.	-	.	ID=gene-C9E97_RS11790;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=C9E97_RS11790;old_locus_tag=C9E97_12060
NZ_PYKA01000084.1	Protein Homology	CDS	18320	19120	.	-	0	ID=cds-WP_000285338.1;Parent=gene-C9E97_RS11790;Dbxref=GenBank:WP_000285338.1;Name=WP_000285338.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462847.1;locus_tag=C9E97_RS11790;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_000285338.1;transl_table=11
NZ_PYKA01000084.1	RefSeq	gene	19136	20152	.	-	.	ID=gene-C9E97_RS11795;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=C9E97_RS11795;old_locus_tag=C9E97_12065
NZ_PYKA01000084.1	Protein Homology	CDS	19136	20152	.	-	0	ID=cds-WP_000487685.1;Parent=gene-C9E97_RS11795;Dbxref=GenBank:WP_000487685.1;Name=WP_000487685.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462846.1;locus_tag=C9E97_RS11795;product=lysophospholipase L2;protein_id=WP_000487685.1;transl_table=11
NZ_PYKA01000084.1	RefSeq	gene	20263	20883	.	+	.	ID=gene-C9E97_RS11800;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=C9E97_RS11800;old_locus_tag=C9E97_12070
NZ_PYKA01000084.1	Protein Homology	CDS	20263	20883	.	+	0	ID=cds-WP_000142523.1;Parent=gene-C9E97_RS11800;Dbxref=GenBank:WP_000142523.1;Name=WP_000142523.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462845.1;locus_tag=C9E97_RS11800;product=homoserine/homoserine lactone efflux protein;protein_id=WP_000142523.1;transl_table=11
NZ_PYKA01000084.1	RefSeq	gene	20923	21543	.	-	.	ID=gene-C9E97_RS11805;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=C9E97_RS11805;old_locus_tag=C9E97_12075
NZ_PYKA01000084.1	Protein Homology	CDS	20923	21543	.	-	0	ID=cds-WP_000928814.1;Parent=gene-C9E97_RS11805;Dbxref=GenBank:WP_000928814.1;Name=WP_000928814.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462844.1;locus_tag=C9E97_RS11805;product=threonine export protein RhtC;protein_id=WP_000928814.1;transl_table=11
NZ_PYKA01000084.1	RefSeq	gene	21607	23436	.	-	.	ID=gene-C9E97_RS11810;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=C9E97_RS11810;old_locus_tag=C9E97_12080
NZ_PYKA01000084.1	Protein Homology	CDS	21607	23436	.	-	0	ID=cds-WP_001533487.1;Parent=gene-C9E97_RS11810;Dbxref=GenBank:WP_001533487.1;Name=WP_001533487.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=C9E97_RS11810;product=ATP-dependent DNA helicase RecQ;protein_id=WP_001533487.1;transl_table=11
NZ_PYKA01000084.1	RefSeq	gene	23520	24389	.	-	.	ID=gene-C9E97_RS11815;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=C9E97_RS11815;old_locus_tag=C9E97_12085
NZ_PYKA01000084.1	Protein Homology	CDS	23520	24389	.	-	0	ID=cds-WP_001201692.1;Parent=gene-C9E97_RS11815;Dbxref=GenBank:WP_001201692.1;Name=WP_001201692.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462842.1;locus_tag=C9E97_RS11815;product=phospholipase A;protein_id=WP_001201692.1;transl_table=11
NZ_PYKA01000084.1	RefSeq	gene	24554	25021	.	+	.	ID=gene-C9E97_RS11820;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=C9E97_RS11820;old_locus_tag=C9E97_12090
NZ_PYKA01000084.1	Protein Homology	CDS	24554	25021	.	+	0	ID=cds-WP_001277136.1;Parent=gene-C9E97_RS11820;Dbxref=GenBank:WP_001277136.1;Name=WP_001277136.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=C9E97_RS11820;product=acyl-CoA thioesterase YigI;protein_id=WP_001277136.1;transl_table=11
NZ_PYKA01000084.1	RefSeq	gene	25065	25952	.	+	.	ID=gene-C9E97_RS11825;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=C9E97_RS11825;old_locus_tag=C9E97_12095
NZ_PYKA01000084.1	Protein Homology	CDS	25065	25952	.	+	0	ID=cds-WP_000339076.1;Parent=gene-C9E97_RS11825;Dbxref=GenBank:WP_000339076.1;Name=WP_000339076.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000339076.1;locus_tag=C9E97_RS11825;product=EamA family transporter RarD;protein_id=WP_000339076.1;transl_table=11
##sequence-region NZ_PYKA01000107.1 1 25615
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000107.1	RefSeq	region	1	25615	.	+	.	ID=NZ_PYKA01000107.1:1..25615;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000107.1	RefSeq	gene	42	1838	.	+	.	ID=gene-C9E97_RS14720;Name=C9E97_RS14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14720;old_locus_tag=C9E97_15045
NZ_PYKA01000107.1	Protein Homology	CDS	42	1838	.	+	0	ID=cds-WP_135369370.1;Parent=gene-C9E97_RS14720;Dbxref=GenBank:WP_135369370.1;Name=WP_135369370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159766.1;locus_tag=C9E97_RS14720;product=aryl-sulfate sulfotransferase;protein_id=WP_135369370.1;transl_table=11
NZ_PYKA01000107.1	RefSeq	gene	1858	2529	.	+	.	ID=gene-C9E97_RS14725;Name=C9E97_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14725;old_locus_tag=C9E97_15050
NZ_PYKA01000107.1	Protein Homology	CDS	1858	2529	.	+	0	ID=cds-WP_000096230.1;Parent=gene-C9E97_RS14725;Dbxref=GenBank:WP_000096230.1;Name=WP_000096230.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462108.1;locus_tag=C9E97_RS14725;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_000096230.1;transl_table=11
NZ_PYKA01000107.1	RefSeq	gene	2544	3221	.	+	.	ID=gene-C9E97_RS14730;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=C9E97_RS14730;old_locus_tag=C9E97_15055
NZ_PYKA01000107.1	Protein Homology	CDS	2544	3221	.	+	0	ID=cds-WP_000345576.1;Parent=gene-C9E97_RS14730;Dbxref=GenBank:WP_000345576.1;Name=WP_000345576.1;gbkey=CDS;gene=dsbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462109.1;locus_tag=C9E97_RS14730;product=protein-disulfide oxidoreductase DsbI;protein_id=WP_000345576.1;transl_table=11
NZ_PYKA01000107.1	RefSeq	gene	3392	4045	.	-	.	ID=gene-C9E97_RS14735;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=C9E97_RS14735;old_locus_tag=C9E97_15060
NZ_PYKA01000107.1	Protein Homology	CDS	3392	4045	.	-	0	ID=cds-WP_001076978.1;Parent=gene-C9E97_RS14735;Dbxref=GenBank:WP_001076978.1;Name=WP_001076978.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462110.1;locus_tag=C9E97_RS14735;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_001076978.1;transl_table=11
NZ_PYKA01000107.1	cmsearch	riboswitch	4151	4349	.	-	.	ID=id-NZ_PYKA01000107.1:4151..4349;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PYKA01000107.1	RefSeq	gene	4482	4778	.	+	.	ID=gene-C9E97_RS14740;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=C9E97_RS14740;old_locus_tag=C9E97_15065
NZ_PYKA01000107.1	Protein Homology	CDS	4482	4778	.	+	0	ID=cds-WP_000566824.1;Parent=gene-C9E97_RS14740;Dbxref=GenBank:WP_000566824.1;Name=WP_000566824.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566826.1;locus_tag=C9E97_RS14740;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_000566824.1;transl_table=11
NZ_PYKA01000107.1	RefSeq	gene	4853	5062	.	-	.	ID=gene-C9E97_RS14745;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=C9E97_RS14745;old_locus_tag=C9E97_15070
NZ_PYKA01000107.1	Protein Homology	CDS	4853	5062	.	-	0	ID=cds-WP_000928927.1;Parent=gene-C9E97_RS14745;Dbxref=GenBank:WP_000928927.1;Name=WP_000928927.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462112.1;locus_tag=C9E97_RS14745;product=cell surface composition regulator GlgS;protein_id=WP_000928927.1;transl_table=11
NZ_PYKA01000107.1	RefSeq	gene	5320	5940	.	+	.	ID=gene-C9E97_RS14750;Name=C9E97_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14750;old_locus_tag=C9E97_15075
NZ_PYKA01000107.1	Protein Homology	CDS	5320	5940	.	+	0	ID=cds-WP_000171739.1;Parent=gene-C9E97_RS14750;Dbxref=GenBank:WP_000171739.1;Name=WP_000171739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462113.1;locus_tag=C9E97_RS14750;product=OB-fold-containig protein;protein_id=WP_000171739.1;transl_table=11
NZ_PYKA01000107.1	RefSeq	gene	5959	7638	.	+	.	ID=gene-C9E97_RS14755;Name=C9E97_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14755;old_locus_tag=C9E97_15080
NZ_PYKA01000107.1	Protein Homology	CDS	5959	7638	.	+	0	ID=cds-WP_135369369.1;Parent=gene-C9E97_RS14755;Dbxref=GenBank:WP_135369369.1;Name=WP_135369369.1;Ontology_term=GO:0016020,GO:0016600;gbkey=CDS;go_component=membrane|0016020||IEA,flotillin complex|0016600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=C9E97_RS14755;product=flotillin family protein;protein_id=WP_135369369.1;transl_table=11
NZ_PYKA01000107.1	RefSeq	gene	7878	7937	.	+	.	ID=gene-C9E97_RS23580;Name=C9E97_RS23580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23580
NZ_PYKA01000107.1	Protein Homology	CDS	7878	7937	.	+	0	ID=cds-WP_001804776.1;Parent=gene-C9E97_RS23580;Dbxref=GenBank:WP_001804776.1;Name=WP_001804776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=C9E97_RS23580;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001804776.1;transl_table=11
NZ_PYKA01000107.1	RefSeq	gene	8097	9530	.	-	.	ID=gene-C9E97_RS14765;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=C9E97_RS14765;old_locus_tag=C9E97_15090
NZ_PYKA01000107.1	Protein Homology	CDS	8097	9530	.	-	0	ID=cds-WP_000867680.1;Parent=gene-C9E97_RS14765;Dbxref=GenBank:WP_000867680.1;Name=WP_000867680.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462115.1;locus_tag=C9E97_RS14765;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_000867680.1;transl_table=11
NZ_PYKA01000107.1	RefSeq	gene	9578	12421	.	-	.	ID=gene-C9E97_RS14770;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=C9E97_RS14770;old_locus_tag=C9E97_15095
NZ_PYKA01000107.1	Protein Homology	CDS	9578	12421	.	-	0	ID=cds-WP_135369368.1;Parent=gene-C9E97_RS14770;Dbxref=GenBank:WP_135369368.1;Name=WP_135369368.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462116.1;locus_tag=C9E97_RS14770;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_135369368.1;transl_table=11
NZ_PYKA01000107.1	RefSeq	gene	12539	13840	.	-	.	ID=gene-C9E97_RS14775;Name=C9E97_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14775;old_locus_tag=C9E97_15100
NZ_PYKA01000107.1	Protein Homology	CDS	12539	13840	.	-	0	ID=cds-WP_000046211.1;Parent=gene-C9E97_RS14775;Dbxref=GenBank:WP_000046211.1;Name=WP_000046211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462117.1;locus_tag=C9E97_RS14775;product=inorganic triphosphatase;protein_id=WP_000046211.1;transl_table=11
NZ_PYKA01000107.1	RefSeq	gene	14082	14696	.	+	.	ID=gene-C9E97_RS14780;Name=C9E97_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14780;old_locus_tag=C9E97_15110
NZ_PYKA01000107.1	Protein Homology	CDS	14082	14696	.	+	0	ID=cds-WP_001125344.1;Parent=gene-C9E97_RS14780;Dbxref=GenBank:WP_001125344.1;Name=WP_001125344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462118.1;locus_tag=C9E97_RS14780;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_001125344.1;transl_table=11
NZ_PYKA01000107.1	RefSeq	gene	14759	16000	.	+	.	ID=gene-C9E97_RS14785;Name=C9E97_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14785;old_locus_tag=C9E97_15115
NZ_PYKA01000107.1	Protein Homology	CDS	14759	16000	.	+	0	ID=cds-WP_000708447.1;Parent=gene-C9E97_RS14785;Dbxref=GenBank:WP_000708447.1;Name=WP_000708447.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462119.1;locus_tag=C9E97_RS14785;product=multifunctional CCA addition/repair protein;protein_id=WP_000708447.1;transl_table=11
NZ_PYKA01000107.1	RefSeq	pseudogene	16021	16105	.	+	.	ID=gene-C9E97_RS24065;Name=C9E97_RS24065;end_range=16105,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS24065;partial=true;pseudo=true;start_range=.,16021
NZ_PYKA01000107.1	Protein Homology	CDS	16021	16105	.	+	0	ID=cds-C9E97_RS24065;Parent=gene-C9E97_RS24065;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=16105,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=C9E97_RS24065;partial=true;product=hypothetical protein;pseudo=true;start_range=.,16021;transl_table=11
NZ_PYKA01000107.1	RefSeq	gene	16104	16925	.	-	.	ID=gene-C9E97_RS14790;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=C9E97_RS14790;old_locus_tag=C9E97_15120
NZ_PYKA01000107.1	Protein Homology	CDS	16104	16925	.	-	0	ID=cds-WP_001281933.1;Parent=gene-C9E97_RS14790;Dbxref=GenBank:WP_001281933.1;Name=WP_001281933.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=C9E97_RS14790;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001281933.1;transl_table=11
NZ_PYKA01000107.1	RefSeq	gene	17023	17382	.	-	.	ID=gene-C9E97_RS14795;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=C9E97_RS14795;old_locus_tag=C9E97_15125
NZ_PYKA01000107.1	Protein Homology	CDS	17023	17382	.	-	0	ID=cds-WP_023195111.1;Parent=gene-C9E97_RS14795;Dbxref=GenBank:WP_023195111.1;Name=WP_023195111.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681574.1;locus_tag=C9E97_RS14795;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_023195111.1;transl_table=11
NZ_PYKA01000107.1	RefSeq	gene	17489	18100	.	+	.	ID=gene-C9E97_RS14800;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=C9E97_RS14800;old_locus_tag=C9E97_15130
NZ_PYKA01000107.1	Protein Homology	CDS	17489	18100	.	+	0	ID=cds-WP_001272784.1;Parent=gene-C9E97_RS14800;Dbxref=GenBank:WP_001272784.1;Name=WP_001272784.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462122.1;locus_tag=C9E97_RS14800;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_001272784.1;transl_table=11
NZ_PYKA01000107.1	RefSeq	pseudogene	18084	18227	.	+	.	ID=gene-C9E97_RS23500;Name=C9E97_RS23500;end_range=18227,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23500;partial=true;pseudo=true;start_range=.,18084
NZ_PYKA01000107.1	Protein Homology	CDS	18084	18227	.	+	0	ID=cds-C9E97_RS23500;Parent=gene-C9E97_RS23500;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016829;end_range=18227,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311971.1;locus_tag=C9E97_RS23500;partial=true;product=fumarate hydratase;pseudo=true;start_range=.,18084;transl_table=11
NZ_PYKA01000107.1	RefSeq	gene	18350	19363	.	-	.	ID=gene-C9E97_RS14810;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=C9E97_RS14810;old_locus_tag=C9E97_15140
NZ_PYKA01000107.1	Protein Homology	CDS	18350	19363	.	-	0	ID=cds-WP_001264389.1;Parent=gene-C9E97_RS14810;Dbxref=GenBank:WP_001264389.1;Name=WP_001264389.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=C9E97_RS14810;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_001264389.1;transl_table=11
NZ_PYKA01000107.1	RefSeq	gene	19591	19806	.	+	.	ID=gene-C9E97_RS14815;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=C9E97_RS14815;old_locus_tag=C9E97_15145
NZ_PYKA01000107.1	Protein Homology	CDS	19591	19806	.	+	0	ID=cds-WP_001144069.1;Parent=gene-C9E97_RS14815;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=C9E97_RS14815;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11
NZ_PYKA01000107.1	RefSeq	gene	20042	21787	.	+	.	ID=gene-C9E97_RS14820;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=C9E97_RS14820;old_locus_tag=C9E97_15150
NZ_PYKA01000107.1	Protein Homology	CDS	20042	21787	.	+	0	ID=cds-WP_000918865.1;Parent=gene-C9E97_RS14820;Dbxref=GenBank:WP_000918865.1;Name=WP_000918865.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462125.1;locus_tag=C9E97_RS14820;product=DNA primase;protein_id=WP_000918865.1;transl_table=11
NZ_PYKA01000107.1	RefSeq	gene	21802	23784	.	+	.	ID=gene-C9E97_RS14825;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=C9E97_RS14825;old_locus_tag=C9E97_15155
NZ_PYKA01000107.1	Protein Homology	CDS	21802	23784	.	+	0	ID=cds-WP_001120159.1;Parent=gene-C9E97_RS14825;Dbxref=GenBank:WP_001120159.1;Name=WP_001120159.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF004208.0;locus_tag=C9E97_RS14825;product=RNA polymerase sigma factor RpoD;protein_id=WP_001120159.1;transl_table=11
NZ_PYKA01000107.1	RefSeq	gene	23908	24414	.	-	.	ID=gene-C9E97_RS14830;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=C9E97_RS14830;old_locus_tag=C9E97_15160
NZ_PYKA01000107.1	Protein Homology	CDS	23908	24414	.	-	0	ID=cds-WP_000237776.1;Parent=gene-C9E97_RS14830;Dbxref=GenBank:WP_000237776.1;Name=WP_000237776.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462127.1;locus_tag=C9E97_RS14830;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_000237776.1;transl_table=11
NZ_PYKA01000107.1	RefSeq	gene	24540	24615	.	+	.	ID=gene-C9E97_RS14835;Name=C9E97_RS14835;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS14835;old_locus_tag=C9E97_15165
NZ_PYKA01000107.1	tRNAscan-SE	tRNA	24540	24615	.	+	.	ID=rna-C9E97_RS14835;Parent=gene-C9E97_RS14835;anticodon=(pos:24573..24575);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS14835;product=tRNA-Ile
NZ_PYKA01000107.1	tRNAscan-SE	exon	24540	24615	.	+	.	ID=exon-C9E97_RS14835-1;Parent=rna-C9E97_RS14835;anticodon=(pos:24573..24575);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS14835;product=tRNA-Ile
NZ_PYKA01000107.1	RefSeq	gene	24695	25462	.	-	.	ID=gene-C9E97_RS14840;Name=C9E97_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS14840;old_locus_tag=C9E97_15170
NZ_PYKA01000107.1	Protein Homology	CDS	24695	25462	.	-	0	ID=cds-WP_135369405.1;Parent=gene-C9E97_RS14840;Dbxref=GenBank:WP_135369405.1;Name=WP_135369405.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462128.1;locus_tag=C9E97_RS14840;product=siderophore-interacting protein;protein_id=WP_135369405.1;transl_table=11
##sequence-region NZ_PYKA01000138.1 1 25590
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000138.1	RefSeq	region	1	25590	.	+	.	ID=NZ_PYKA01000138.1:1..25590;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000138.1	RefSeq	pseudogene	1	79	.	-	.	ID=gene-C9E97_RS23145;Name=C9E97_RS23145;end_range=79,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23145;old_locus_tag=C9E97_23685;partial=true;pseudo=true;start_range=.,1
NZ_PYKA01000138.1	Protein Homology	CDS	1	79	.	-	0	ID=cds-C9E97_RS23145;Parent=gene-C9E97_RS23145;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=79,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308979.1;locus_tag=C9E97_RS23145;partial=true;product=heavy metal-binding domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKA01000138.1	RefSeq	gene	346	2694	.	+	.	ID=gene-C9E97_RS23150;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=C9E97_RS23150;old_locus_tag=C9E97_23695
NZ_PYKA01000138.1	Protein Homology	CDS	346	2694	.	+	0	ID=cds-WP_135369388.1;Parent=gene-C9E97_RS23150;Dbxref=GenBank:WP_135369388.1;Name=WP_135369388.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=C9E97_RS23150;product=SPI-1 type III secretion system effector HECT-type E3 ubiquitin transferase SopA;protein_id=WP_135369388.1;transl_table=11
NZ_PYKA01000138.1	RefSeq	pseudogene	2824	2901	.	-	.	ID=gene-C9E97_RS23915;Name=C9E97_RS23915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23915;partial=true;pseudo=true;start_range=.,2824
NZ_PYKA01000138.1	Protein Homology	CDS	2824	2901	.	-	0	ID=cds-C9E97_RS23915;Parent=gene-C9E97_RS23915;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226536.1;locus_tag=C9E97_RS23915;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2824;transl_table=11
NZ_PYKA01000138.1	RefSeq	gene	3061	4491	.	+	.	ID=gene-C9E97_RS23155;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=C9E97_RS23155;old_locus_tag=C9E97_23700
NZ_PYKA01000138.1	Protein Homology	CDS	3061	4491	.	+	0	ID=cds-WP_000216699.1;Parent=gene-C9E97_RS23155;Dbxref=GenBank:WP_000216699.1;Name=WP_000216699.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461012.1;locus_tag=C9E97_RS23155;product=exodeoxyribonuclease I;protein_id=WP_000216699.1;transl_table=11
NZ_PYKA01000138.1	RefSeq	gene	4627	5985	.	-	.	ID=gene-C9E97_RS23160;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=C9E97_RS23160;old_locus_tag=C9E97_23705
NZ_PYKA01000138.1	Protein Homology	CDS	4627	5985	.	-	0	ID=cds-WP_001519005.1;Parent=gene-C9E97_RS23160;Dbxref=GenBank:WP_001519005.1;Name=WP_001519005.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=C9E97_RS23160;product=putrescine/proton symporter PlaP;protein_id=WP_001519005.1;transl_table=11
NZ_PYKA01000138.1	RefSeq	gene	5975	6037	.	-	.	ID=gene-C9E97_RS23165;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=C9E97_RS23165;old_locus_tag=C9E97_23710
NZ_PYKA01000138.1	Protein Homology	CDS	5975	6037	.	-	0	ID=cds-WP_096335044.1;Parent=gene-C9E97_RS23165;Dbxref=GenBank:WP_096335044.1;Name=WP_096335044.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=C9E97_RS23165;product=membrane protein YoeI;protein_id=WP_096335044.1;transl_table=11
NZ_PYKA01000138.1	RefSeq	gene	6271	7185	.	-	.	ID=gene-C9E97_RS23170;Name=C9E97_RS23170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23170;old_locus_tag=C9E97_23715
NZ_PYKA01000138.1	Protein Homology	CDS	6271	7185	.	-	0	ID=cds-WP_000803316.1;Parent=gene-C9E97_RS23170;Dbxref=GenBank:WP_000803316.1;Name=WP_000803316.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461014.1;locus_tag=C9E97_RS23170;product=LysR family transcriptional regulator;protein_id=WP_000803316.1;transl_table=11
NZ_PYKA01000138.1	RefSeq	gene	7231	8055	.	-	.	ID=gene-C9E97_RS23175;Name=C9E97_RS23175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23175;old_locus_tag=C9E97_23720
NZ_PYKA01000138.1	Protein Homology	CDS	7231	8055	.	-	0	ID=cds-WP_000754712.1;Parent=gene-C9E97_RS23175;Dbxref=GenBank:WP_000754712.1;Name=WP_000754712.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461015.1;locus_tag=C9E97_RS23175;product=SDR family oxidoreductase;protein_id=WP_000754712.1;transl_table=11
NZ_PYKA01000138.1	RefSeq	gene	8218	8268	.	+	.	ID=gene-C9E97_RS23180;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=C9E97_RS23180;old_locus_tag=C9E97_23725
NZ_PYKA01000138.1	Protein Homology	CDS	8218	8268	.	+	0	ID=cds-WP_001364200.1;Parent=gene-C9E97_RS23180;Dbxref=GenBank:WP_001364200.1;Name=WP_001364200.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=C9E97_RS23180;product=his operon leader peptide;protein_id=WP_001364200.1;transl_table=11
NZ_PYKA01000138.1	cmsearch	sequence_feature	8244	8367	.	+	.	ID=id-NZ_PYKA01000138.1:8244..8367;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PYKA01000138.1	RefSeq	gene	8414	9313	.	+	.	ID=gene-C9E97_RS23185;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=C9E97_RS23185;old_locus_tag=C9E97_23730
NZ_PYKA01000138.1	Protein Homology	CDS	8414	9313	.	+	0	ID=cds-WP_000886604.1;Parent=gene-C9E97_RS23185;Dbxref=GenBank:WP_000886604.1;Name=WP_000886604.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=C9E97_RS23185;product=ATP phosphoribosyltransferase;protein_id=WP_000886604.1;transl_table=11
NZ_PYKA01000138.1	RefSeq	gene	9416	10720	.	+	.	ID=gene-C9E97_RS23190;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=C9E97_RS23190;old_locus_tag=C9E97_23735
NZ_PYKA01000138.1	Protein Homology	CDS	9416	10720	.	+	0	ID=cds-WP_000009618.1;Parent=gene-C9E97_RS23190;Dbxref=GenBank:WP_000009618.1;Name=WP_000009618.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461017.1;locus_tag=C9E97_RS23190;product=histidinol dehydrogenase;protein_id=WP_000009618.1;transl_table=11
NZ_PYKA01000138.1	RefSeq	gene	10717	11796	.	+	.	ID=gene-C9E97_RS23195;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=C9E97_RS23195;old_locus_tag=C9E97_23740
NZ_PYKA01000138.1	Protein Homology	CDS	10717	11796	.	+	0	ID=cds-WP_001580956.1;Parent=gene-C9E97_RS23195;Dbxref=GenBank:WP_001580956.1;Name=WP_001580956.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461018.1;locus_tag=C9E97_RS23195;product=histidinol-phosphate transaminase;protein_id=WP_001580956.1;transl_table=11
NZ_PYKA01000138.1	RefSeq	gene	11793	12860	.	+	.	ID=gene-C9E97_RS23200;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=C9E97_RS23200;old_locus_tag=C9E97_23745
NZ_PYKA01000138.1	Protein Homology	CDS	11793	12860	.	+	0	ID=cds-WP_000080050.1;Parent=gene-C9E97_RS23200;Dbxref=GenBank:WP_000080050.1;Name=WP_000080050.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461019.1;locus_tag=C9E97_RS23200;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_000080050.1;transl_table=11
NZ_PYKA01000138.1	RefSeq	gene	12860	13450	.	+	.	ID=gene-C9E97_RS23205;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=C9E97_RS23205;old_locus_tag=C9E97_23750
NZ_PYKA01000138.1	Protein Homology	CDS	12860	13450	.	+	0	ID=cds-WP_063809125.1;Parent=gene-C9E97_RS23205;Dbxref=GenBank:WP_063809125.1;Name=WP_063809125.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=C9E97_RS23205;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_063809125.1;transl_table=11
NZ_PYKA01000138.1	RefSeq	gene	13450	14187	.	+	.	ID=gene-C9E97_RS23210;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=C9E97_RS23210;old_locus_tag=C9E97_23755
NZ_PYKA01000138.1	Protein Homology	CDS	13450	14187	.	+	0	ID=cds-WP_000586406.1;Parent=gene-C9E97_RS23210;Dbxref=GenBank:WP_000586406.1;Name=WP_000586406.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461021.1;locus_tag=C9E97_RS23210;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_000586406.1;transl_table=11
NZ_PYKA01000138.1	RefSeq	gene	14169	14945	.	+	.	ID=gene-C9E97_RS23215;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=C9E97_RS23215;old_locus_tag=C9E97_23760
NZ_PYKA01000138.1	Protein Homology	CDS	14169	14945	.	+	0	ID=cds-WP_000880125.1;Parent=gene-C9E97_RS23215;Dbxref=GenBank:WP_000880125.1;Name=WP_000880125.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461022.1;locus_tag=C9E97_RS23215;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_000880125.1;transl_table=11
NZ_PYKA01000138.1	RefSeq	gene	14939	15550	.	+	.	ID=gene-C9E97_RS23220;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=C9E97_RS23220;old_locus_tag=C9E97_23765
NZ_PYKA01000138.1	Protein Homology	CDS	14939	15550	.	+	0	ID=cds-WP_000954846.1;Parent=gene-C9E97_RS23220;Dbxref=GenBank:WP_000954846.1;Name=WP_000954846.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461023.1;locus_tag=C9E97_RS23220;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_000954846.1;transl_table=11
NZ_PYKA01000138.1	RefSeq	gene	15631	16614	.	-	.	ID=gene-C9E97_RS23225;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=C9E97_RS23225;old_locus_tag=C9E97_23770
NZ_PYKA01000138.1	Protein Homology	CDS	15631	16614	.	-	0	ID=cds-WP_135369389.1;Parent=gene-C9E97_RS23225;Dbxref=GenBank:WP_135369389.1;Name=WP_135369389.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461024.1;locus_tag=C9E97_RS23225;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WP_135369389.1;transl_table=11
NZ_PYKA01000138.1	RefSeq	gene	16757	17923	.	-	.	ID=gene-C9E97_RS23230;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=C9E97_RS23230;old_locus_tag=C9E97_23775
NZ_PYKA01000138.1	Protein Homology	CDS	16757	17923	.	-	0	ID=cds-WP_135369390.1;Parent=gene-C9E97_RS23230;Dbxref=GenBank:WP_135369390.1;Name=WP_135369390.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461025.1;locus_tag=C9E97_RS23230;product=UDP-glucose 6-dehydrogenase;protein_id=WP_135369390.1;transl_table=11
NZ_PYKA01000138.1	RefSeq	gene	18160	19566	.	-	.	ID=gene-C9E97_RS23240;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=C9E97_RS23240;old_locus_tag=C9E97_23785
NZ_PYKA01000138.1	Protein Homology	CDS	18160	19566	.	-	0	ID=cds-WP_000043532.1;Parent=gene-C9E97_RS23240;Dbxref=GenBank:WP_000043532.1;Name=WP_000043532.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461026.1;locus_tag=C9E97_RS23240;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_000043532.1;transl_table=11
NZ_PYKA01000138.1	RefSeq	gene	19730	21160	.	-	.	ID=gene-C9E97_RS23245;Name=C9E97_RS23245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23245;old_locus_tag=C9E97_23790
NZ_PYKA01000138.1	Protein Homology	CDS	19730	21160	.	-	0	ID=cds-WP_000368703.1;Parent=gene-C9E97_RS23245;Dbxref=GenBank:WP_000368703.1;Name=WP_000368703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461027.1;locus_tag=C9E97_RS23245;product=undecaprenyl-phosphate galactose phosphotransferase;protein_id=WP_000368703.1;transl_table=11
NZ_PYKA01000138.1	RefSeq	gene	21232	22665	.	-	.	ID=gene-C9E97_RS23250;Name=rfbK;gbkey=Gene;gene=rfbK;gene_biotype=protein_coding;locus_tag=C9E97_RS23250;old_locus_tag=C9E97_23795
NZ_PYKA01000138.1	Protein Homology	CDS	21232	22665	.	-	0	ID=cds-WP_135369037.1;Parent=gene-C9E97_RS23250;Dbxref=GenBank:WP_135369037.1;Name=WP_135369037.1;gbkey=CDS;gene=rfbK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461028.1;locus_tag=C9E97_RS23250;product=O-antigen biosynthesis phosphomannomutase RfbK;protein_id=WP_135369037.1;transl_table=11
NZ_PYKA01000138.1	RefSeq	gene	22652	24091	.	-	.	ID=gene-C9E97_RS23255;Name=C9E97_RS23255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23255;old_locus_tag=C9E97_23800
NZ_PYKA01000138.1	Protein Homology	CDS	22652	24091	.	-	0	ID=cds-WP_000009016.1;Parent=gene-C9E97_RS23255;Dbxref=GenBank:WP_000009016.1;Name=WP_000009016.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461029.1;locus_tag=C9E97_RS23255;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_000009016.1;transl_table=11
NZ_PYKA01000138.1	RefSeq	gene	24092	25036	.	-	.	ID=gene-C9E97_RS23260;Name=rfbN;gbkey=Gene;gene=rfbN;gene_biotype=protein_coding;locus_tag=C9E97_RS23260;old_locus_tag=C9E97_23805
NZ_PYKA01000138.1	Protein Homology	CDS	24092	25036	.	-	0	ID=cds-WP_000705151.1;Parent=gene-C9E97_RS23260;Dbxref=GenBank:WP_000705151.1;Name=WP_000705151.1;gbkey=CDS;gene=rfbN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461030.1;locus_tag=C9E97_RS23260;product=O antigen biosynthesis rhamnosyltransferase RfbN;protein_id=WP_000705151.1;transl_table=11
NZ_PYKA01000138.1	RefSeq	pseudogene	25037	25590	.	-	.	ID=gene-C9E97_RS23265;Name=C9E97_RS23265;end_range=25590,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23265;old_locus_tag=C9E97_23810;partial=true;pseudo=true
NZ_PYKA01000138.1	Protein Homology	CDS	25037	25590	.	-	2	ID=cds-C9E97_RS23265;Parent=gene-C9E97_RS23265;Note=internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006486,GO:0016757;end_range=25590,.;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461031.1;locus_tag=C9E97_RS23265;partial=true;product=glycosyltransferase family 4 protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKA01000095.1 1 25329
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000095.1	RefSeq	region	1	25329	.	+	.	ID=NZ_PYKA01000095.1:1..25329;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000095.1	RefSeq	gene	142	624	.	-	.	ID=gene-C9E97_RS12580;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=C9E97_RS12580;old_locus_tag=C9E97_12870
NZ_PYKA01000095.1	Protein Homology	CDS	142	624	.	-	0	ID=cds-WP_001518569.1;Parent=gene-C9E97_RS12580;Dbxref=GenBank:WP_001518569.1;Name=WP_001518569.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461618.1;locus_tag=C9E97_RS12580;product=SsrA-binding protein SmpB;protein_id=WP_001518569.1;transl_table=11
NZ_PYKA01000095.1	RefSeq	gene	813	1250	.	+	.	ID=gene-C9E97_RS12585;Name=C9E97_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12585;old_locus_tag=C9E97_12875
NZ_PYKA01000095.1	Protein Homology	CDS	813	1250	.	+	0	ID=cds-WP_001537508.1;Parent=gene-C9E97_RS12585;Dbxref=GenBank:WP_001537508.1;Name=WP_001537508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543334.1;locus_tag=C9E97_RS12585;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_001537508.1;transl_table=11
NZ_PYKA01000095.1	RefSeq	gene	1240	1530	.	+	.	ID=gene-C9E97_RS12590;Name=C9E97_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12590;old_locus_tag=C9E97_12880
NZ_PYKA01000095.1	Protein Homology	CDS	1240	1530	.	+	0	ID=cds-WP_001112990.1;Parent=gene-C9E97_RS12590;Dbxref=GenBank:WP_001112990.1;Name=WP_001112990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461616.1;locus_tag=C9E97_RS12590;product=RnfH family protein;protein_id=WP_001112990.1;transl_table=11
NZ_PYKA01000095.1	RefSeq	gene	1696	2034	.	-	.	ID=gene-C9E97_RS12595;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=C9E97_RS12595;old_locus_tag=C9E97_12885
NZ_PYKA01000095.1	Protein Homology	CDS	1696	2034	.	-	0	ID=cds-WP_001203445.1;Parent=gene-C9E97_RS12595;Dbxref=GenBank:WP_001203445.1;Name=WP_001203445.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461615.1;locus_tag=C9E97_RS12595;product=outer membrane protein assembly factor BamE;protein_id=WP_001203445.1;transl_table=11
NZ_PYKA01000095.1	RefSeq	gene	2183	3844	.	-	.	ID=gene-C9E97_RS12600;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=C9E97_RS12600;old_locus_tag=C9E97_12890
NZ_PYKA01000095.1	Protein Homology	CDS	2183	3844	.	-	0	ID=cds-WP_000880965.1;Parent=gene-C9E97_RS12600;Dbxref=GenBank:WP_000880965.1;Name=WP_000880965.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461614.1;locus_tag=C9E97_RS12600;product=DNA repair protein RecN;protein_id=WP_000880965.1;transl_table=11
NZ_PYKA01000095.1	RefSeq	gene	3930	4808	.	-	.	ID=gene-C9E97_RS12605;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=C9E97_RS12605;old_locus_tag=C9E97_12895
NZ_PYKA01000095.1	Protein Homology	CDS	3930	4808	.	-	0	ID=cds-WP_001059155.1;Parent=gene-C9E97_RS12605;Dbxref=GenBank:WP_001059155.1;Name=WP_001059155.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=C9E97_RS12605;product=NAD(+) kinase;protein_id=WP_001059155.1;transl_table=11
NZ_PYKA01000095.1	RefSeq	gene	4931	5521	.	+	.	ID=gene-C9E97_RS12615;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=C9E97_RS12615;old_locus_tag=C9E97_12905
NZ_PYKA01000095.1	Protein Homology	CDS	4931	5521	.	+	0	ID=cds-WP_001518875.1;Parent=gene-C9E97_RS12615;Dbxref=GenBank:WP_001518875.1;Name=WP_001518875.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461611.1;locus_tag=C9E97_RS12615;product=nucleotide exchange factor GrpE;protein_id=WP_001518875.1;transl_table=11
NZ_PYKA01000095.1	RefSeq	gene	5556	6161	.	-	.	ID=gene-C9E97_RS12620;Name=C9E97_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12620;old_locus_tag=C9E97_12910
NZ_PYKA01000095.1	Protein Homology	CDS	5556	6161	.	-	0	ID=cds-WP_135369224.1;Parent=gene-C9E97_RS12620;Dbxref=GenBank:WP_135369224.1;Name=WP_135369224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461610.1;locus_tag=C9E97_RS12620;product=DUF6630 family protein;protein_id=WP_135369224.1;transl_table=11
NZ_PYKA01000095.1	RefSeq	gene	6282	7568	.	-	.	ID=gene-C9E97_RS12625;Name=C9E97_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12625;old_locus_tag=C9E97_12915
NZ_PYKA01000095.1	Protein Homology	CDS	6282	7568	.	-	0	ID=cds-WP_127172650.1;Parent=gene-C9E97_RS12625;Dbxref=GenBank:WP_127172650.1;Name=WP_127172650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=C9E97_RS12625;product=HlyC/CorC family transporter;protein_id=WP_127172650.1;transl_table=11
NZ_PYKA01000095.1	RefSeq	gene	7588	8379	.	-	.	ID=gene-C9E97_RS12630;Name=C9E97_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12630;old_locus_tag=C9E97_12920
NZ_PYKA01000095.1	Protein Homology	CDS	7588	8379	.	-	0	ID=cds-WP_001537507.1;Parent=gene-C9E97_RS12630;Dbxref=GenBank:WP_001537507.1;Name=WP_001537507.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461608.1;locus_tag=C9E97_RS12630;product=cytochrome C assembly family protein;protein_id=WP_001537507.1;transl_table=11
NZ_PYKA01000095.1	RefSeq	gene	8545	9906	.	+	.	ID=gene-C9E97_RS12640;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=C9E97_RS12640;old_locus_tag=C9E97_12930
NZ_PYKA01000095.1	Protein Homology	CDS	8545	9906	.	+	0	ID=cds-WP_000460052.1;Parent=gene-C9E97_RS12640;Dbxref=GenBank:WP_000460052.1;Name=WP_000460052.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=C9E97_RS12640;product=signal recognition particle protein;protein_id=WP_000460052.1;transl_table=11
NZ_PYKA01000095.1	RefSeq	gene	10250	10498	.	+	.	ID=gene-C9E97_RS12645;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=C9E97_RS12645;old_locus_tag=C9E97_12935
NZ_PYKA01000095.1	Protein Homology	CDS	10250	10498	.	+	0	ID=cds-WP_000256453.1;Parent=gene-C9E97_RS12645;Dbxref=GenBank:WP_000256453.1;Name=WP_000256453.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=C9E97_RS12645;product=30S ribosomal protein S16;protein_id=WP_000256453.1;transl_table=11
NZ_PYKA01000095.1	RefSeq	gene	10517	11065	.	+	.	ID=gene-C9E97_RS12650;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=C9E97_RS12650;old_locus_tag=C9E97_12940
NZ_PYKA01000095.1	Protein Homology	CDS	10517	11065	.	+	0	ID=cds-WP_000043266.1;Parent=gene-C9E97_RS12650;Dbxref=GenBank:WP_000043266.1;Name=WP_000043266.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=C9E97_RS12650;product=ribosome maturation factor RimM;protein_id=WP_000043266.1;transl_table=11
NZ_PYKA01000095.1	RefSeq	gene	11110	11877	.	+	.	ID=gene-C9E97_RS12655;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=C9E97_RS12655;old_locus_tag=C9E97_12945
NZ_PYKA01000095.1	Protein Homology	CDS	11110	11877	.	+	0	ID=cds-WP_000469804.1;Parent=gene-C9E97_RS12655;Dbxref=GenBank:WP_000469804.1;Name=WP_000469804.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461604.1;locus_tag=C9E97_RS12655;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000469804.1;transl_table=11
NZ_PYKA01000095.1	RefSeq	gene	11918	12265	.	+	.	ID=gene-C9E97_RS12660;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=C9E97_RS12660;old_locus_tag=C9E97_12950
NZ_PYKA01000095.1	Protein Homology	CDS	11918	12265	.	+	0	ID=cds-WP_000065257.1;Parent=gene-C9E97_RS12660;Dbxref=GenBank:WP_000065257.1;Name=WP_000065257.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=C9E97_RS12660;product=50S ribosomal protein L19;protein_id=WP_000065257.1;transl_table=11
NZ_PYKA01000095.1	RefSeq	gene	12422	13642	.	-	.	ID=gene-C9E97_RS12665;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=C9E97_RS12665;old_locus_tag=C9E97_12955
NZ_PYKA01000095.1	Protein Homology	CDS	12422	13642	.	-	0	ID=cds-WP_001030985.1;Parent=gene-C9E97_RS12665;Dbxref=GenBank:WP_001030985.1;Name=WP_001030985.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461602.1;locus_tag=C9E97_RS12665;product=diguanylate cyclase DgcN;protein_id=WP_001030985.1;transl_table=11
NZ_PYKA01000095.1	RefSeq	gene	13635	14153	.	-	.	ID=gene-C9E97_RS12670;Name=C9E97_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12670;old_locus_tag=C9E97_12960
NZ_PYKA01000095.1	Protein Homology	CDS	13635	14153	.	-	0	ID=cds-WP_001212379.1;Parent=gene-C9E97_RS12670;Dbxref=GenBank:WP_001212379.1;Name=WP_001212379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461601.1;locus_tag=C9E97_RS12670;product=YfiR family protein;protein_id=WP_001212379.1;transl_table=11
NZ_PYKA01000095.1	RefSeq	gene	14593	15663	.	+	.	ID=gene-C9E97_RS12675;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=C9E97_RS12675;old_locus_tag=C9E97_12965
NZ_PYKA01000095.1	Protein Homology	CDS	14593	15663	.	+	0	ID=cds-WP_135369223.1;Parent=gene-C9E97_RS12675;Dbxref=GenBank:WP_135369223.1;Name=WP_135369223.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461600.1;locus_tag=C9E97_RS12675;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_135369223.1;transl_table=11
NZ_PYKA01000095.1	RefSeq	gene	15673	16794	.	+	.	ID=gene-C9E97_RS12680;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=C9E97_RS12680;old_locus_tag=C9E97_12970
NZ_PYKA01000095.1	Protein Homology	CDS	15673	16794	.	+	0	ID=cds-WP_080151479.1;Parent=gene-C9E97_RS12680;Dbxref=GenBank:WP_080151479.1;Name=WP_080151479.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461599.1;locus_tag=C9E97_RS12680;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_080151479.1;transl_table=11
NZ_PYKA01000095.1	RefSeq	gene	16852	17760	.	+	.	ID=gene-C9E97_RS12685;Name=C9E97_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12685;old_locus_tag=C9E97_12975
NZ_PYKA01000095.1	Protein Homology	CDS	16852	17760	.	+	0	ID=cds-WP_000210993.1;Parent=gene-C9E97_RS12685;Dbxref=GenBank:WP_000210993.1;Name=WP_000210993.1;Ontology_term=GO:0005509,GO:0016787,GO:0046872;gbkey=CDS;go_function=calcium ion binding|0005509||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461598.1;locus_tag=C9E97_RS12685;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_000210993.1;transl_table=11
NZ_PYKA01000095.1	RefSeq	gene	17721	18881	.	-	.	ID=gene-C9E97_RS12690;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=C9E97_RS12690;old_locus_tag=C9E97_12980
NZ_PYKA01000095.1	Protein Homology	CDS	17721	18881	.	-	0	ID=cds-WP_000200080.1;Parent=gene-C9E97_RS12690;Dbxref=GenBank:WP_000200080.1;Name=WP_000200080.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461597.1;locus_tag=C9E97_RS12690;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_000200080.1;transl_table=11
NZ_PYKA01000095.1	cmsearch	sequence_feature	18904	19029	.	-	.	ID=id-NZ_PYKA01000095.1:18904..19029;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PYKA01000095.1	RefSeq	gene	18981	19028	.	-	.	ID=gene-C9E97_RS12695;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=C9E97_RS12695;old_locus_tag=C9E97_12985
NZ_PYKA01000095.1	Protein Homology	CDS	18981	19028	.	-	0	ID=cds-WP_010989056.1;Parent=gene-C9E97_RS12695;Dbxref=GenBank:WP_010989056.1;Name=WP_010989056.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449055.1;locus_tag=C9E97_RS12695;product=pheA operon leader peptide PheL;protein_id=WP_010989056.1;transl_table=11
NZ_PYKA01000095.1	RefSeq	gene	19132	19470	.	-	.	ID=gene-C9E97_RS12700;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=C9E97_RS12700;old_locus_tag=C9E97_12990
NZ_PYKA01000095.1	Protein Homology	CDS	19132	19470	.	-	0	ID=cds-WP_000178449.1;Parent=gene-C9E97_RS12700;Dbxref=GenBank:WP_000178449.1;Name=WP_000178449.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461595.1;locus_tag=C9E97_RS12700;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_000178449.1;transl_table=11
NZ_PYKA01000095.1	RefSeq	gene	19742	20479	.	-	.	ID=gene-C9E97_RS12710;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=C9E97_RS12710;old_locus_tag=C9E97_12995
NZ_PYKA01000095.1	Protein Homology	CDS	19742	20479	.	-	0	ID=cds-WP_000197660.1;Parent=gene-C9E97_RS12710;Dbxref=GenBank:WP_000197660.1;Name=WP_000197660.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461594.1;locus_tag=C9E97_RS12710;product=outer membrane protein assembly factor BamD;protein_id=WP_000197660.1;transl_table=11
NZ_PYKA01000095.1	RefSeq	gene	20611	21591	.	+	.	ID=gene-C9E97_RS12715;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=C9E97_RS12715;old_locus_tag=C9E97_13000
NZ_PYKA01000095.1	Protein Homology	CDS	20611	21591	.	+	0	ID=cds-WP_000079130.1;Parent=gene-C9E97_RS12715;Dbxref=GenBank:WP_000079130.1;Name=WP_000079130.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=C9E97_RS12715;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_000079130.1;transl_table=11
NZ_PYKA01000095.1	RefSeq	gene	21588	22319	.	+	.	ID=gene-C9E97_RS12720;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=C9E97_RS12720;old_locus_tag=C9E97_13005
NZ_PYKA01000095.1	Protein Homology	CDS	21588	22319	.	+	0	ID=cds-WP_000992634.1;Parent=gene-C9E97_RS12720;Dbxref=GenBank:WP_000992634.1;Name=WP_000992634.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461592.1;locus_tag=C9E97_RS12720;product=purine nucleoside phosphorylase YfiH;protein_id=WP_000992634.1;transl_table=11
NZ_PYKA01000095.1	RefSeq	gene	22449	25022	.	+	.	ID=gene-C9E97_RS12725;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=C9E97_RS12725;old_locus_tag=C9E97_13010
NZ_PYKA01000095.1	Protein Homology	CDS	22449	25022	.	+	0	ID=cds-WP_001235092.1;Parent=gene-C9E97_RS12725;Dbxref=GenBank:WP_001235092.1;Name=WP_001235092.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=C9E97_RS12725;product=ATP-dependent chaperone ClpB;protein_id=WP_001235092.1;transl_table=11
##sequence-region NZ_PYKA01000094.1 1 22123
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000094.1	RefSeq	region	1	22123	.	+	.	ID=NZ_PYKA01000094.1:1..22123;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000094.1	RefSeq	gene	263	553	.	+	.	ID=gene-C9E97_RS12480;Name=C9E97_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12480;old_locus_tag=C9E97_12770
NZ_PYKA01000094.1	Protein Homology	CDS	263	553	.	+	0	ID=cds-WP_077950939.1;Parent=gene-C9E97_RS12480;Dbxref=GenBank:WP_077950939.1;Name=WP_077950939.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF017717.6;locus_tag=C9E97_RS12480;product=helix-turn-helix transcriptional regulator;protein_id=WP_077950939.1;transl_table=11
NZ_PYKA01000094.1	RefSeq	gene	663	848	.	-	.	ID=gene-C9E97_RS23480;Name=C9E97_RS23480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23480
NZ_PYKA01000094.1	Protein Homology	CDS	663	848	.	-	0	ID=cds-WP_023258407.1;Parent=gene-C9E97_RS23480;Dbxref=GenBank:WP_023258407.1;Name=WP_023258407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000235891.1;locus_tag=C9E97_RS23480;product=YlcI/YnfO family protein;protein_id=WP_023258407.1;transl_table=11
NZ_PYKA01000094.1	RefSeq	gene	1036	1212	.	+	.	ID=gene-C9E97_RS23485;Name=C9E97_RS23485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23485
NZ_PYKA01000094.1	Protein Homology	CDS	1036	1212	.	+	0	ID=cds-WP_001118612.1;Parent=gene-C9E97_RS23485;Dbxref=GenBank:WP_001118612.1;Name=WP_001118612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120337.1;locus_tag=C9E97_RS23485;product=host cell division inhibitor Icd-like protein;protein_id=WP_001118612.1;transl_table=11
NZ_PYKA01000094.1	RefSeq	gene	1205	1564	.	+	.	ID=gene-C9E97_RS12490;Name=C9E97_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12490;old_locus_tag=C9E97_12780
NZ_PYKA01000094.1	Protein Homology	CDS	1205	1564	.	+	0	ID=cds-WP_135369719.1;Parent=gene-C9E97_RS12490;Dbxref=GenBank:WP_135369719.1;Name=WP_135369719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246999.1;locus_tag=C9E97_RS12490;product=hypothetical protein;protein_id=WP_135369719.1;transl_table=11
NZ_PYKA01000094.1	RefSeq	gene	1596	1880	.	+	.	ID=gene-C9E97_RS12495;Name=C9E97_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12495;old_locus_tag=C9E97_12785
NZ_PYKA01000094.1	Protein Homology	CDS	1596	1880	.	+	0	ID=cds-WP_135369718.1;Parent=gene-C9E97_RS12495;Dbxref=GenBank:WP_135369718.1;Name=WP_135369718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001027153.1;locus_tag=C9E97_RS12495;product=hypothetical protein;protein_id=WP_135369718.1;transl_table=11
NZ_PYKA01000094.1	RefSeq	gene	1877	2260	.	+	.	ID=gene-C9E97_RS12500;Name=C9E97_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12500;old_locus_tag=C9E97_12790
NZ_PYKA01000094.1	Protein Homology	CDS	1877	2260	.	+	0	ID=cds-WP_135369717.1;Parent=gene-C9E97_RS12500;Dbxref=GenBank:WP_135369717.1;Name=WP_135369717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001075579.1;locus_tag=C9E97_RS12500;product=DUF5375 family protein;protein_id=WP_135369717.1;transl_table=11
NZ_PYKA01000094.1	RefSeq	gene	2257	4929	.	+	.	ID=gene-C9E97_RS12505;Name=C9E97_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12505;old_locus_tag=C9E97_12795
NZ_PYKA01000094.1	Protein Homology	CDS	2257	4929	.	+	0	ID=cds-WP_135369716.1;Parent=gene-C9E97_RS12505;Dbxref=GenBank:WP_135369716.1;Name=WP_135369716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211874.1;locus_tag=C9E97_RS12505;product=TOPRIM and DUF927 domain-containing protein;protein_id=WP_135369716.1;transl_table=11
NZ_PYKA01000094.1	RefSeq	gene	5331	6092	.	+	.	ID=gene-C9E97_RS12510;Name=C9E97_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12510;old_locus_tag=C9E97_12800
NZ_PYKA01000094.1	Protein Homology	CDS	5331	6092	.	+	0	ID=cds-WP_135369715.1;Parent=gene-C9E97_RS12510;Dbxref=GenBank:WP_135369715.1;Name=WP_135369715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066197.1;locus_tag=C9E97_RS12510;product=septation initiation protein;protein_id=WP_135369715.1;transl_table=11
NZ_PYKA01000094.1	RefSeq	gene	6092	6364	.	+	.	ID=gene-C9E97_RS12515;Name=C9E97_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12515;old_locus_tag=C9E97_12805
NZ_PYKA01000094.1	Protein Homology	CDS	6092	6364	.	+	0	ID=cds-WP_001185339.1;Parent=gene-C9E97_RS12515;Dbxref=GenBank:WP_001185339.1;Name=WP_001185339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308323.1;locus_tag=C9E97_RS12515;product=ogr/Delta-like zinc finger family protein;protein_id=WP_001185339.1;transl_table=11
NZ_PYKA01000094.1	RefSeq	gene	6805	8826	.	+	.	ID=gene-C9E97_RS12520;Name=C9E97_RS12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12520;old_locus_tag=C9E97_12810
NZ_PYKA01000094.1	Protein Homology	CDS	6805	8826	.	+	0	ID=cds-WP_063808708.1;Parent=gene-C9E97_RS12520;Dbxref=GenBank:WP_063808708.1;Name=WP_063808708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000093896.1;locus_tag=C9E97_RS12520;product=DEAD/DEAH box helicase;protein_id=WP_063808708.1;transl_table=11
NZ_PYKA01000094.1	RefSeq	gene	8823	9452	.	+	.	ID=gene-C9E97_RS12525;Name=C9E97_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12525;old_locus_tag=C9E97_12815
NZ_PYKA01000094.1	GeneMarkS-2+	CDS	8823	9452	.	+	0	ID=cds-WP_063808707.1;Parent=gene-C9E97_RS12525;Dbxref=GenBank:WP_063808707.1;Name=WP_063808707.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E97_RS12525;product=hypothetical protein;protein_id=WP_063808707.1;transl_table=11
NZ_PYKA01000094.1	RefSeq	gene	10196	11134	.	-	.	ID=gene-C9E97_RS12530;Name=pgtE;gbkey=Gene;gene=pgtE;gene_biotype=protein_coding;locus_tag=C9E97_RS12530;old_locus_tag=C9E97_12820
NZ_PYKA01000094.1	Protein Homology	CDS	10196	11134	.	-	0	ID=cds-WP_023244699.1;Parent=gene-C9E97_RS12530;Dbxref=GenBank:WP_023244699.1;Name=WP_023244699.1;gbkey=CDS;gene=pgtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461336.1;locus_tag=C9E97_RS12530;product=omptin family outer membrane protease PgtE;protein_id=WP_023244699.1;transl_table=11
NZ_PYKA01000094.1	RefSeq	gene	11402	12649	.	-	.	ID=gene-C9E97_RS12535;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=protein_coding;locus_tag=C9E97_RS12535;old_locus_tag=C9E97_12825
NZ_PYKA01000094.1	Protein Homology	CDS	11402	12649	.	-	0	ID=cds-WP_052932207.1;Parent=gene-C9E97_RS12535;Dbxref=GenBank:WP_052932207.1;Name=WP_052932207.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;gene=pgtA;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461337.1;locus_tag=C9E97_RS12535;product=two-component system response regulator PgtA;protein_id=WP_052932207.1;transl_table=11
NZ_PYKA01000094.1	RefSeq	gene	12639	14645	.	-	.	ID=gene-C9E97_RS12540;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=C9E97_RS12540;old_locus_tag=C9E97_12830
NZ_PYKA01000094.1	Protein Homology	CDS	12639	14645	.	-	0	ID=cds-WP_000678495.1;Parent=gene-C9E97_RS12540;Dbxref=GenBank:WP_000678495.1;Name=WP_000678495.1;Ontology_term=GO:0000160,GO:0000155,GO:0005524;gbkey=CDS;gene=pgtB;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461338.1;locus_tag=C9E97_RS12540;product=two-component system sensor histidine kinase PgtB;protein_id=WP_000678495.1;transl_table=11
NZ_PYKA01000094.1	RefSeq	gene	14642	15835	.	-	.	ID=gene-C9E97_RS12545;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=C9E97_RS12545;old_locus_tag=C9E97_12835
NZ_PYKA01000094.1	Protein Homology	CDS	14642	15835	.	-	0	ID=cds-WP_000467983.1;Parent=gene-C9E97_RS12545;Dbxref=GenBank:WP_000467983.1;Name=WP_000467983.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461339.1;locus_tag=C9E97_RS12545;product=phosphoglycerate transport regulator PgtC;protein_id=WP_000467983.1;transl_table=11
NZ_PYKA01000094.1	RefSeq	gene	16271	17662	.	+	.	ID=gene-C9E97_RS12555;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=protein_coding;locus_tag=C9E97_RS12555;old_locus_tag=C9E97_12845
NZ_PYKA01000094.1	Protein Homology	CDS	16271	17662	.	+	0	ID=cds-WP_020437486.1;Parent=gene-C9E97_RS12555;Dbxref=GenBank:WP_020437486.1;Name=WP_020437486.1;Ontology_term=GO:0015760,GO:0035435,GO:0061513;gbkey=CDS;gene=pgtP;go_function=glucose 6-phosphate:phosphate antiporter activity|0061513||IEA;go_process=glucose-6-phosphate transport|0015760||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461340.1;locus_tag=C9E97_RS12555;product=phosphoglycerate transporter PgtP;protein_id=WP_020437486.1;transl_table=11
NZ_PYKA01000094.1	RefSeq	gene	17938	18180	.	-	.	ID=gene-C9E97_RS12560;Name=C9E97_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12560;old_locus_tag=C9E97_12850
NZ_PYKA01000094.1	Protein Homology	CDS	17938	18180	.	-	0	ID=cds-WP_000639889.1;Parent=gene-C9E97_RS12560;Dbxref=GenBank:WP_000639889.1;Name=WP_000639889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461341.1;locus_tag=C9E97_RS12560;product=YfdY family protein;protein_id=WP_000639889.1;transl_table=11
NZ_PYKA01000094.1	RefSeq	gene	18702	19622	.	+	.	ID=gene-C9E97_RS12565;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=C9E97_RS12565;old_locus_tag=C9E97_12855
NZ_PYKA01000094.1	Protein Homology	CDS	18702	19622	.	+	0	ID=cds-WP_000484428.1;Parent=gene-C9E97_RS12565;Dbxref=GenBank:WP_000484428.1;Name=WP_000484428.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461342.1;locus_tag=C9E97_RS12565;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_000484428.1;transl_table=11
NZ_PYKA01000094.1	RefSeq	gene	20025	20096	.	+	.	ID=gene-C9E97_RS12570;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=C9E97_RS12570;old_locus_tag=C9E97_12860
NZ_PYKA01000094.1	Protein Homology	CDS	20025	20096	.	+	0	ID=cds-WP_010723117.1;Parent=gene-C9E97_RS12570;Dbxref=GenBank:WP_010723117.1;Name=WP_010723117.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ypdK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=C9E97_RS12570;product=membrane protein YpdK;protein_id=WP_010723117.1;transl_table=11
NZ_PYKA01000094.1	RefSeq	gene	20146	21384	.	-	.	ID=gene-C9E97_RS12575;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=C9E97_RS12575;old_locus_tag=C9E97_12865
NZ_PYKA01000094.1	Protein Homology	CDS	20146	21384	.	-	0	ID=cds-WP_000763118.1;Parent=gene-C9E97_RS12575;Dbxref=GenBank:WP_000763118.1;Name=WP_000763118.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461343.1;locus_tag=C9E97_RS12575;product=alanine transaminase;protein_id=WP_000763118.1;transl_table=11
##sequence-region NZ_PYKA01000087.1 1 21539
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000087.1	RefSeq	region	1	21539	.	+	.	ID=NZ_PYKA01000087.1:1..21539;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000087.1	RefSeq	gene	287	724	.	-	.	ID=gene-C9E97_RS11990;Name=C9E97_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11990;old_locus_tag=C9E97_12270
NZ_PYKA01000087.1	Protein Homology	CDS	287	724	.	-	0	ID=cds-WP_000973248.1;Parent=gene-C9E97_RS11990;Dbxref=GenBank:WP_000973248.1;Name=WP_000973248.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463046.1;locus_tag=C9E97_RS11990;product=acetyltransferase;protein_id=WP_000973248.1;transl_table=11
NZ_PYKA01000087.1	RefSeq	gene	881	1810	.	+	.	ID=gene-C9E97_RS11995;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=C9E97_RS11995;old_locus_tag=C9E97_12275
NZ_PYKA01000087.1	Protein Homology	CDS	881	1810	.	+	0	ID=cds-WP_001122767.1;Parent=gene-C9E97_RS11995;Dbxref=GenBank:WP_001122767.1;Name=WP_001122767.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=C9E97_RS11995;product=homoserine O-acetyltransferase MetA;protein_id=WP_001122767.1;transl_table=11
NZ_PYKA01000087.1	RefSeq	gene	2079	3680	.	+	.	ID=gene-C9E97_RS12000;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=C9E97_RS12000;old_locus_tag=C9E97_12280
NZ_PYKA01000087.1	Protein Homology	CDS	2079	3680	.	+	0	ID=cds-WP_134938733.1;Parent=gene-C9E97_RS12000;Dbxref=GenBank:WP_134938733.1;Name=WP_134938733.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463048.1;locus_tag=C9E97_RS12000;product=malate synthase A;protein_id=WP_134938733.1;transl_table=11
NZ_PYKA01000087.1	RefSeq	gene	3712	5016	.	+	.	ID=gene-C9E97_RS12005;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=C9E97_RS12005;old_locus_tag=C9E97_12285
NZ_PYKA01000087.1	Protein Homology	CDS	3712	5016	.	+	0	ID=cds-WP_000857881.1;Parent=gene-C9E97_RS12005;Dbxref=GenBank:WP_000857881.1;Name=WP_000857881.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=C9E97_RS12005;product=isocitrate lyase;protein_id=WP_000857881.1;transl_table=11
NZ_PYKA01000087.1	RefSeq	gene	5118	6869	.	+	.	ID=gene-C9E97_RS12010;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=C9E97_RS12010;old_locus_tag=C9E97_12290
NZ_PYKA01000087.1	Protein Homology	CDS	5118	6869	.	+	0	ID=cds-WP_001137268.1;Parent=gene-C9E97_RS12010;Dbxref=GenBank:WP_001137268.1;Name=WP_001137268.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463050.1;locus_tag=C9E97_RS12010;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_001137268.1;transl_table=11
NZ_PYKA01000087.1	RefSeq	gene	6833	7240	.	-	.	ID=gene-C9E97_RS12015;Name=C9E97_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12015;old_locus_tag=C9E97_12295
NZ_PYKA01000087.1	Protein Homology	CDS	6833	7240	.	-	0	ID=cds-WP_010989091.1;Parent=gene-C9E97_RS12015;Dbxref=GenBank:WP_010989091.1;Name=WP_010989091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463051.1;locus_tag=C9E97_RS12015;product=ASCH domain-containing protein;protein_id=WP_010989091.1;transl_table=11
NZ_PYKA01000087.1	RefSeq	gene	7251	8075	.	-	.	ID=gene-C9E97_RS12020;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=C9E97_RS12020;old_locus_tag=C9E97_12300
NZ_PYKA01000087.1	Protein Homology	CDS	7251	8075	.	-	0	ID=cds-WP_000226434.1;Parent=gene-C9E97_RS12020;Dbxref=GenBank:WP_000226434.1;Name=WP_000226434.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463052.1;locus_tag=C9E97_RS12020;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_000226434.1;transl_table=11
NZ_PYKA01000087.1	RefSeq	gene	8380	12063	.	+	.	ID=gene-C9E97_RS12025;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=C9E97_RS12025;old_locus_tag=C9E97_12305
NZ_PYKA01000087.1	Protein Homology	CDS	8380	12063	.	+	0	ID=cds-WP_135369516.1;Parent=gene-C9E97_RS12025;Dbxref=GenBank:WP_135369516.1;Name=WP_135369516.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312964.1;locus_tag=C9E97_RS12025;product=methionine synthase;protein_id=WP_135369516.1;transl_table=11
NZ_PYKA01000087.1	RefSeq	gene	12330	13961	.	+	.	ID=gene-C9E97_RS12030;Name=C9E97_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12030;old_locus_tag=C9E97_12310
NZ_PYKA01000087.1	Protein Homology	CDS	12330	13961	.	+	0	ID=cds-WP_000956811.1;Parent=gene-C9E97_RS12030;Dbxref=GenBank:WP_000956811.1;Name=WP_000956811.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463054.1;locus_tag=C9E97_RS12030;product=Na/Pi cotransporter family protein;protein_id=WP_000956811.1;transl_table=11
NZ_PYKA01000087.1	RefSeq	gene	14036	14725	.	-	.	ID=gene-C9E97_RS12035;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=C9E97_RS12035;old_locus_tag=C9E97_12315
NZ_PYKA01000087.1	Protein Homology	CDS	14036	14725	.	-	0	ID=cds-WP_135369517.1;Parent=gene-C9E97_RS12035;Dbxref=GenBank:WP_135369517.1;Name=WP_135369517.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463055.1;locus_tag=C9E97_RS12035;product=dipeptidase PepE;protein_id=WP_135369517.1;transl_table=11
NZ_PYKA01000087.1	RefSeq	gene	14797	14898	.	+	.	ID=gene-C9E97_RS12040;Name=C9E97_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12040;old_locus_tag=C9E97_12320
NZ_PYKA01000087.1	Protein Homology	CDS	14797	14898	.	+	0	ID=cds-WP_031606091.1;Parent=gene-C9E97_RS12040;Dbxref=GenBank:WP_031606091.1;Name=WP_031606091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463056.1;locus_tag=C9E97_RS12040;product=hypothetical protein;protein_id=WP_031606091.1;transl_table=11
NZ_PYKA01000087.1	RefSeq	gene	14933	15472	.	+	.	ID=gene-C9E97_RS12045;Name=C9E97_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12045;old_locus_tag=C9E97_12325
NZ_PYKA01000087.1	Protein Homology	CDS	14933	15472	.	+	0	ID=cds-WP_001096724.1;Parent=gene-C9E97_RS12045;Dbxref=GenBank:WP_001096724.1;Name=WP_001096724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=C9E97_RS12045;product=DUF2058 domain-containing protein;protein_id=WP_001096724.1;transl_table=11
NZ_PYKA01000087.1	RefSeq	gene	15519	16388	.	+	.	ID=gene-C9E97_RS12050;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=C9E97_RS12050;old_locus_tag=C9E97_12330
NZ_PYKA01000087.1	Protein Homology	CDS	15519	16388	.	+	0	ID=cds-WP_000954611.1;Parent=gene-C9E97_RS12050;Dbxref=GenBank:WP_000954611.1;Name=WP_000954611.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463058.1;locus_tag=C9E97_RS12050;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_000954611.1;transl_table=11
NZ_PYKA01000087.1	RefSeq	gene	16385	16657	.	-	.	ID=gene-C9E97_RS12055;Name=C9E97_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12055;old_locus_tag=C9E97_12335
NZ_PYKA01000087.1	Protein Homology	CDS	16385	16657	.	-	0	ID=cds-WP_001207628.1;Parent=gene-C9E97_RS12055;Dbxref=GenBank:WP_001207628.1;Name=WP_001207628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463059.1;locus_tag=C9E97_RS12055;product=DUF3811 domain-containing protein;protein_id=WP_001207628.1;transl_table=11
NZ_PYKA01000087.1	RefSeq	gene	16755	17696	.	-	.	ID=gene-C9E97_RS12060;Name=panS;gbkey=Gene;gene=panS;gene_biotype=protein_coding;locus_tag=C9E97_RS12060;old_locus_tag=C9E97_12340
NZ_PYKA01000087.1	Protein Homology	CDS	16755	17696	.	-	0	ID=cds-WP_000881652.1;Parent=gene-C9E97_RS12060;Dbxref=GenBank:WP_000881652.1;Name=WP_000881652.1;gbkey=CDS;gene=panS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463060.1;locus_tag=C9E97_RS12060;product=ketopantoate/pantoate/pantothenate transporter PanS;protein_id=WP_000881652.1;transl_table=11
NZ_PYKA01000087.1	RefSeq	gene	17958	18686	.	-	.	ID=gene-C9E97_RS12065;Name=C9E97_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12065;old_locus_tag=C9E97_12345
NZ_PYKA01000087.1	Protein Homology	CDS	17958	18686	.	-	0	ID=cds-WP_000587738.1;Parent=gene-C9E97_RS12065;Dbxref=GenBank:WP_000587738.1;Name=WP_000587738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463061.1;locus_tag=C9E97_RS12065;product=hypothetical protein;protein_id=WP_000587738.1;transl_table=11
NZ_PYKA01000087.1	RefSeq	pseudogene	18883	19173	.	-	.	ID=gene-C9E97_RS12070;Name=C9E97_RS12070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS12070;old_locus_tag=C9E97_12350;pseudo=true
NZ_PYKA01000087.1	Protein Homology	CDS	18883	19173	.	-	0	ID=cds-C9E97_RS12070;Parent=gene-C9E97_RS12070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463062.1;locus_tag=C9E97_RS12070;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKA01000087.1	RefSeq	gene	19426	19881	.	-	.	ID=gene-C9E97_RS12075;Name=C9E97_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12075;old_locus_tag=C9E97_12355
NZ_PYKA01000087.1	Protein Homology	CDS	19426	19881	.	-	0	ID=cds-WP_135369174.1;Parent=gene-C9E97_RS12075;Dbxref=GenBank:WP_135369174.1;Name=WP_135369174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463063.1;locus_tag=C9E97_RS12075;product=hypothetical protein;protein_id=WP_135369174.1;transl_table=11
NZ_PYKA01000087.1	RefSeq	gene	19878	20441	.	-	.	ID=gene-C9E97_RS12080;Name=C9E97_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12080;old_locus_tag=C9E97_12360
NZ_PYKA01000087.1	Protein Homology	CDS	19878	20441	.	-	0	ID=cds-WP_135369175.1;Parent=gene-C9E97_RS12080;Dbxref=GenBank:WP_135369175.1;Name=WP_135369175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001520313.1;locus_tag=C9E97_RS12080;product=DUF4376 domain-containing protein;protein_id=WP_135369175.1;transl_table=11
NZ_PYKA01000087.1	RefSeq	gene	20493	21539	.	-	.	ID=gene-C9E97_RS23790;Name=C9E97_RS23790;end_range=21539,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23790;partial=true
NZ_PYKA01000087.1	Protein Homology	CDS	20493	21539	.	-	0	ID=cds-WP_245304074.1;Parent=gene-C9E97_RS23790;Dbxref=GenBank:WP_245304074.1;Name=WP_245304074.1;Ontology_term=GO:0019062,GO:0046718;end_range=21539,.;gbkey=CDS;go_process=virion attachment to host cell|0019062||IEA,symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894561.1;locus_tag=C9E97_RS23790;partial=true;product=tail fiber protein;protein_id=WP_245304074.1;transl_table=11
##sequence-region NZ_PYKA01000110.1 1 21105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000110.1	RefSeq	region	1	21105	.	+	.	ID=NZ_PYKA01000110.1:1..21105;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000110.1	RefSeq	pseudogene	1	379	.	-	.	ID=gene-C9E97_RS16250;Name=C9E97_RS16250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS16250;old_locus_tag=C9E97_16615;partial=true;pseudo=true;start_range=.,1
NZ_PYKA01000110.1	Protein Homology	CDS	1	379	.	-	0	ID=cds-C9E97_RS16250;Parent=gene-C9E97_RS16250;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461178.1;locus_tag=C9E97_RS16250;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	366	953	.	-	.	ID=gene-C9E97_RS16255;Name=C9E97_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16255;old_locus_tag=C9E97_16620
NZ_PYKA01000110.1	Protein Homology	CDS	366	953	.	-	0	ID=cds-WP_135369403.1;Parent=gene-C9E97_RS16255;Dbxref=GenBank:WP_135369403.1;Name=WP_135369403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001207831.1;locus_tag=C9E97_RS16255;product=YmfQ family protein;protein_id=WP_135369403.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	956	2035	.	-	.	ID=gene-C9E97_RS16260;Name=C9E97_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16260;old_locus_tag=C9E97_16625
NZ_PYKA01000110.1	Protein Homology	CDS	956	2035	.	-	0	ID=cds-WP_135369402.1;Parent=gene-C9E97_RS16260;Dbxref=GenBank:WP_135369402.1;Name=WP_135369402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000785580.1;locus_tag=C9E97_RS16260;product=baseplate J/gp47 family protein;protein_id=WP_135369402.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	2028	2441	.	-	.	ID=gene-C9E97_RS16265;Name=C9E97_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16265;old_locus_tag=C9E97_16630
NZ_PYKA01000110.1	Protein Homology	CDS	2028	2441	.	-	0	ID=cds-WP_000605051.1;Parent=gene-C9E97_RS16265;Dbxref=GenBank:WP_000605051.1;Name=WP_000605051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000605050.1;locus_tag=C9E97_RS16265;product=phage GP46 family protein;protein_id=WP_000605051.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	2446	2979	.	-	.	ID=gene-C9E97_RS16270;Name=C9E97_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16270;old_locus_tag=C9E97_16635
NZ_PYKA01000110.1	Protein Homology	CDS	2446	2979	.	-	0	ID=cds-WP_001273647.1;Parent=gene-C9E97_RS16270;Dbxref=GenBank:WP_001273647.1;Name=WP_001273647.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273649.1;locus_tag=C9E97_RS16270;product=phage baseplate assembly protein V;protein_id=WP_001273647.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	2979	4037	.	-	.	ID=gene-C9E97_RS16275;Name=C9E97_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16275;old_locus_tag=C9E97_16640
NZ_PYKA01000110.1	Protein Homology	CDS	2979	4037	.	-	0	ID=cds-WP_135369401.1;Parent=gene-C9E97_RS16275;Dbxref=GenBank:WP_135369401.1;Name=WP_135369401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066639.1;locus_tag=C9E97_RS16275;product=phage baseplate assembly protein;protein_id=WP_135369401.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	4034	5374	.	-	.	ID=gene-C9E97_RS16280;Name=C9E97_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16280;old_locus_tag=C9E97_16645
NZ_PYKA01000110.1	Protein Homology	CDS	4034	5374	.	-	0	ID=cds-WP_135369400.1;Parent=gene-C9E97_RS16280;Dbxref=GenBank:WP_135369400.1;Name=WP_135369400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742721.1;locus_tag=C9E97_RS16280;product=DNA circularization protein;protein_id=WP_135369400.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	5434	5883	.	-	.	ID=gene-C9E97_RS16285;Name=C9E97_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16285;old_locus_tag=C9E97_16650
NZ_PYKA01000110.1	Protein Homology	CDS	5434	5883	.	-	0	ID=cds-WP_001033736.1;Parent=gene-C9E97_RS16285;Dbxref=GenBank:WP_001033736.1;Name=WP_001033736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033736.1;locus_tag=C9E97_RS16285;product=hypothetical protein;protein_id=WP_001033736.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	5900	7825	.	-	.	ID=gene-C9E97_RS16290;Name=C9E97_RS16290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16290;old_locus_tag=C9E97_16655
NZ_PYKA01000110.1	Protein Homology	CDS	5900	7825	.	-	0	ID=cds-WP_135369399.1;Parent=gene-C9E97_RS16290;Dbxref=GenBank:WP_135369399.1;Name=WP_135369399.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000785382.1;locus_tag=C9E97_RS16290;product=phage tail tape measure protein;protein_id=WP_135369399.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	7910	8236	.	-	.	ID=gene-C9E97_RS16295;Name=C9E97_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16295;old_locus_tag=C9E97_16660
NZ_PYKA01000110.1	Protein Homology	CDS	7910	8236	.	-	0	ID=cds-WP_000588852.1;Parent=gene-C9E97_RS16295;Dbxref=GenBank:WP_000588852.1;Name=WP_000588852.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588853.1;locus_tag=C9E97_RS16295;product=phage tail assembly protein;protein_id=WP_000588852.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	8233	8589	.	-	.	ID=gene-C9E97_RS16300;Name=C9E97_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16300;old_locus_tag=C9E97_16665
NZ_PYKA01000110.1	Protein Homology	CDS	8233	8589	.	-	0	ID=cds-WP_000515952.1;Parent=gene-C9E97_RS16300;Dbxref=GenBank:WP_000515952.1;Name=WP_000515952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707866.1;locus_tag=C9E97_RS16300;product=phage tail tube protein;protein_id=WP_000515952.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	8589	10085	.	-	.	ID=gene-C9E97_RS16305;Name=C9E97_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16305;old_locus_tag=C9E97_16670
NZ_PYKA01000110.1	Protein Homology	CDS	8589	10085	.	-	0	ID=cds-WP_135369398.1;Parent=gene-C9E97_RS16305;Dbxref=GenBank:WP_135369398.1;Name=WP_135369398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707867.1;locus_tag=C9E97_RS16305;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_135369398.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	10075	10239	.	-	.	ID=gene-C9E97_RS16310;Name=C9E97_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16310;old_locus_tag=C9E97_16675
NZ_PYKA01000110.1	Protein Homology	CDS	10075	10239	.	-	0	ID=cds-WP_023210465.1;Parent=gene-C9E97_RS16310;Dbxref=GenBank:WP_023210465.1;Name=WP_023210465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000497754.1;locus_tag=C9E97_RS16310;product=DUF2635 domain-containing protein;protein_id=WP_023210465.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	10243	10803	.	-	.	ID=gene-C9E97_RS16315;Name=C9E97_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16315;old_locus_tag=C9E97_16680
NZ_PYKA01000110.1	Protein Homology	CDS	10243	10803	.	-	0	ID=cds-WP_023210466.1;Parent=gene-C9E97_RS16315;Dbxref=GenBank:WP_023210466.1;Name=WP_023210466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000779217.1;locus_tag=C9E97_RS16315;product=phage tail terminator protein;protein_id=WP_023210466.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	10800	11312	.	-	.	ID=gene-C9E97_RS16320;Name=C9E97_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16320;old_locus_tag=C9E97_16685
NZ_PYKA01000110.1	Protein Homology	CDS	10800	11312	.	-	0	ID=cds-WP_001135697.1;Parent=gene-C9E97_RS16320;Dbxref=GenBank:WP_001135697.1;Name=WP_001135697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135699.1;locus_tag=C9E97_RS16320;product=hypothetical protein;protein_id=WP_001135697.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	11284	11688	.	-	.	ID=gene-C9E97_RS16325;Name=C9E97_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16325;old_locus_tag=C9E97_16690
NZ_PYKA01000110.1	Protein Homology	CDS	11284	11688	.	-	0	ID=cds-WP_000702409.1;Parent=gene-C9E97_RS16325;Dbxref=GenBank:WP_000702409.1;Name=WP_000702409.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000702408.1;locus_tag=C9E97_RS16325;product=phage head closure protein;protein_id=WP_000702409.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	11685	12008	.	-	.	ID=gene-C9E97_RS16330;Name=C9E97_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16330;old_locus_tag=C9E97_16695
NZ_PYKA01000110.1	Protein Homology	CDS	11685	12008	.	-	0	ID=cds-WP_000927378.1;Parent=gene-C9E97_RS16330;Dbxref=GenBank:WP_000927378.1;Name=WP_000927378.1;Ontology_term=GO:0016032;gbkey=CDS;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001492759.1;locus_tag=C9E97_RS16330;product=head-tail connector protein;protein_id=WP_000927378.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	12011	12211	.	-	.	ID=gene-C9E97_RS16335;Name=C9E97_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16335;old_locus_tag=C9E97_16700
NZ_PYKA01000110.1	Protein Homology	CDS	12011	12211	.	-	0	ID=cds-WP_000601353.1;Parent=gene-C9E97_RS16335;Dbxref=GenBank:WP_000601353.1;Name=WP_000601353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001735262.1;locus_tag=C9E97_RS16335;product=hypothetical protein;protein_id=WP_000601353.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	12262	13467	.	-	.	ID=gene-C9E97_RS16340;Name=C9E97_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16340;old_locus_tag=C9E97_16705
NZ_PYKA01000110.1	Protein Homology	CDS	12262	13467	.	-	0	ID=cds-WP_080070877.1;Parent=gene-C9E97_RS16340;Dbxref=GenBank:WP_080070877.1;Name=WP_080070877.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559678.1;locus_tag=C9E97_RS16340;product=phage major capsid protein;protein_id=WP_080070877.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	13482	14132	.	-	.	ID=gene-C9E97_RS16345;Name=C9E97_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16345;old_locus_tag=C9E97_16710
NZ_PYKA01000110.1	Protein Homology	CDS	13482	14132	.	-	0	ID=cds-WP_001193639.1;Parent=gene-C9E97_RS16345;Dbxref=GenBank:WP_001193639.1;Name=WP_001193639.1;Ontology_term=GO:0019068,GO:0019082,GO:0005198,GO:0008233;gbkey=CDS;go_function=structural molecule activity|0005198||IEA,peptidase activity|0008233||IEA;go_process=virion assembly|0019068||IEA,viral protein processing|0019082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001193639.1;locus_tag=C9E97_RS16345;product=HK97 family phage prohead protease;protein_id=WP_001193639.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	14110	15351	.	-	.	ID=gene-C9E97_RS16350;Name=C9E97_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16350;old_locus_tag=C9E97_16715
NZ_PYKA01000110.1	Protein Homology	CDS	14110	15351	.	-	0	ID=cds-WP_135369397.1;Parent=gene-C9E97_RS16350;Dbxref=GenBank:WP_135369397.1;Name=WP_135369397.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000466237.1;locus_tag=C9E97_RS16350;product=phage portal protein;protein_id=WP_135369397.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	15351	15533	.	-	.	ID=gene-C9E97_RS16355;Name=ymfR;gbkey=Gene;gene=ymfR;gene_biotype=protein_coding;locus_tag=C9E97_RS16355;old_locus_tag=C9E97_16720
NZ_PYKA01000110.1	Protein Homology	CDS	15351	15533	.	-	0	ID=cds-WP_000605609.1;Parent=gene-C9E97_RS16355;Dbxref=GenBank:WP_000605609.1;Name=WP_000605609.1;gbkey=CDS;gene=ymfR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415668.1;locus_tag=C9E97_RS16355;product=protein YmfR;protein_id=WP_000605609.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	15545	17278	.	-	.	ID=gene-C9E97_RS16360;Name=C9E97_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16360;old_locus_tag=C9E97_16725
NZ_PYKA01000110.1	Protein Homology	CDS	15545	17278	.	-	0	ID=cds-WP_000088184.1;Parent=gene-C9E97_RS16360;Dbxref=GenBank:WP_000088184.1;Name=WP_000088184.1;Ontology_term=GO:0004519,GO:0005524,GO:0140657;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP-dependent activity|0140657||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000088170.1;locus_tag=C9E97_RS16360;product=terminase large subunit;protein_id=WP_000088184.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	17275	17769	.	-	.	ID=gene-C9E97_RS16365;Name=C9E97_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16365;old_locus_tag=C9E97_16730
NZ_PYKA01000110.1	Protein Homology	CDS	17275	17769	.	-	0	ID=cds-WP_000929191.1;Parent=gene-C9E97_RS16365;Dbxref=GenBank:WP_000929191.1;Name=WP_000929191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016249564.1;locus_tag=C9E97_RS16365;product=phage terminase small subunit P27 family;protein_id=WP_000929191.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	17894	18244	.	-	.	ID=gene-C9E97_RS16370;Name=C9E97_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16370;old_locus_tag=C9E97_16735
NZ_PYKA01000110.1	Protein Homology	CDS	17894	18244	.	-	0	ID=cds-WP_079810073.1;Parent=gene-C9E97_RS16370;Dbxref=GenBank:WP_079810073.1;Name=WP_079810073.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135225.1;locus_tag=C9E97_RS16370;product=HNH endonuclease;protein_id=WP_079810073.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	18291	18797	.	-	.	ID=gene-C9E97_RS16375;Name=C9E97_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16375;old_locus_tag=C9E97_16740
NZ_PYKA01000110.1	GeneMarkS-2+	CDS	18291	18797	.	-	0	ID=cds-WP_135369396.1;Parent=gene-C9E97_RS16375;Dbxref=GenBank:WP_135369396.1;Name=WP_135369396.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E97_RS16375;product=hypothetical protein;protein_id=WP_135369396.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	18863	19024	.	-	.	ID=gene-C9E97_RS24080;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=C9E97_RS24080
NZ_PYKA01000110.1	Protein Homology	CDS	18863	19024	.	-	0	ID=cds-WP_420197019.1;Parent=gene-C9E97_RS24080;Dbxref=GenBank:WP_420197019.1;Name=WP_420197019.1;gbkey=CDS;gene=lysC;inference=COORDINATES: protein motif:HMM:NF048206.1;locus_tag=C9E97_RS24080;product=Rz1-like lysis system protein LysC;protein_id=WP_420197019.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	18954	19388	.	-	.	ID=gene-C9E97_RS16380;Name=C9E97_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16380;old_locus_tag=C9E97_16745
NZ_PYKA01000110.1	Protein Homology	CDS	18954	19388	.	-	0	ID=cds-WP_079810071.1;Parent=gene-C9E97_RS16380;Dbxref=GenBank:WP_079810071.1;Name=WP_079810071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778467.1;locus_tag=C9E97_RS16380;product=DUF2570 domain-containing protein;protein_id=WP_079810071.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	19372	19848	.	-	.	ID=gene-C9E97_RS16385;Name=C9E97_RS16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16385;old_locus_tag=C9E97_16750
NZ_PYKA01000110.1	Protein Homology	CDS	19372	19848	.	-	0	ID=cds-WP_079810070.1;Parent=gene-C9E97_RS16385;Dbxref=GenBank:WP_079810070.1;Name=WP_079810070.1;Ontology_term=GO:0005975,GO:0003796,GO:0004553;gbkey=CDS;go_function=lysozyme activity|0003796||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159277.1;locus_tag=C9E97_RS16385;product=glycoside hydrolase family 24 protein;protein_id=WP_079810070.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	19852	20187	.	-	.	ID=gene-C9E97_RS16390;Name=C9E97_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16390;old_locus_tag=C9E97_16755
NZ_PYKA01000110.1	Protein Homology	CDS	19852	20187	.	-	0	ID=cds-WP_023219695.1;Parent=gene-C9E97_RS16390;Dbxref=GenBank:WP_023219695.1;Name=WP_023219695.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001120500.1;locus_tag=C9E97_RS16390;product=phage holin%2C lambda family;protein_id=WP_023219695.1;transl_table=11
NZ_PYKA01000110.1	RefSeq	gene	20484	21105	.	+	.	ID=gene-C9E97_RS16395;Name=C9E97_RS16395;end_range=21105,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS16395;old_locus_tag=C9E97_16760;partial=true
NZ_PYKA01000110.1	Protein Homology	CDS	20484	21105	.	+	0	ID=cds-WP_245304075.1;Parent=gene-C9E97_RS16395;Dbxref=GenBank:WP_245304075.1;Name=WP_245304075.1;end_range=21105,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461181.1;locus_tag=C9E97_RS16395;partial=true;product=P-loop NTPase fold protein;protein_id=WP_245304075.1;transl_table=11
##sequence-region NZ_PYKA01000121.1 1 145134
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000121.1	RefSeq	region	1	145134	.	+	.	ID=NZ_PYKA01000121.1:1..145134;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000121.1	RefSeq	pseudogene	238	439	.	-	.	ID=gene-C9E97_RS23875;Name=C9E97_RS23875;end_range=439,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23875;partial=true;pseudo=true;start_range=.,238
NZ_PYKA01000121.1	Protein Homology	CDS	238	439	.	-	0	ID=cds-C9E97_RS23875;Parent=gene-C9E97_RS23875;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=439,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=C9E97_RS23875;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,238;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	430	555	.	+	.	ID=gene-C9E97_RS23880;Name=C9E97_RS23880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23880;old_locus_tag=C9E97_19220
NZ_PYKA01000121.1	Protein Homology	CDS	430	555	.	+	0	ID=cds-WP_000457876.1;Parent=gene-C9E97_RS23880;Dbxref=GenBank:WP_000457876.1;Name=WP_000457876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457876.1;locus_tag=C9E97_RS23880;product=hypothetical protein;protein_id=WP_000457876.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	pseudogene	888	1764	.	+	.	ID=gene-C9E97_RS18805;Name=C9E97_RS18805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS18805;old_locus_tag=C9E97_19225;pseudo=true
NZ_PYKA01000121.1	Protein Homology	CDS	888	1764	.	+	0	ID=cds-C9E97_RS18805;Parent=gene-C9E97_RS18805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=C9E97_RS18805;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	1936	4047	.	+	.	ID=gene-C9E97_RS18810;Name=sspH1;gbkey=Gene;gene=sspH1;gene_biotype=protein_coding;locus_tag=C9E97_RS18810;old_locus_tag=C9E97_19230
NZ_PYKA01000121.1	Protein Homology	CDS	1936	4047	.	+	0	ID=cds-WP_135369392.1;Parent=gene-C9E97_RS18810;Dbxref=GenBank:WP_135369392.1;Name=WP_135369392.1;gbkey=CDS;gene=sspH1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000481981.1;locus_tag=C9E97_RS18810;product=type III secretion system effector E3 ubiquitin transferase SspH1;protein_id=WP_135369392.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	pseudogene	4147	4374	.	+	.	ID=gene-C9E97_RS18815;Name=C9E97_RS18815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS18815;old_locus_tag=C9E97_19240;partial=true;pseudo=true;start_range=.,4147
NZ_PYKA01000121.1	Protein Homology	CDS	4147	4374	.	+	0	ID=cds-C9E97_RS18815;Parent=gene-C9E97_RS18815;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807729.1;locus_tag=C9E97_RS18815;partial=true;product=DUF4113 domain-containing protein;pseudo=true;start_range=.,4147;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	4367	5038	.	-	.	ID=gene-C9E97_RS18820;Name=C9E97_RS18820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18820;old_locus_tag=C9E97_19245
NZ_PYKA01000121.1	Protein Homology	CDS	4367	5038	.	-	0	ID=cds-WP_045899726.1;Parent=gene-C9E97_RS18820;Dbxref=GenBank:WP_045899726.1;Name=WP_045899726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000334630.1;locus_tag=C9E97_RS18820;product=SOS response-associated peptidase;protein_id=WP_045899726.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	pseudogene	5261	5362	.	-	.	ID=gene-C9E97_RS23885;Name=C9E97_RS23885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23885;partial=true;pseudo=true;start_range=.,5261
NZ_PYKA01000121.1	Protein Homology	CDS	5261	5362	.	-	0	ID=cds-C9E97_RS23885;Parent=gene-C9E97_RS23885;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460860.1;locus_tag=C9E97_RS23885;partial=true;product=DUF72 domain-containing protein;pseudo=true;start_range=.,5261;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	5359	5925	.	-	.	ID=gene-C9E97_RS18830;Name=C9E97_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18830;old_locus_tag=C9E97_19255
NZ_PYKA01000121.1	Protein Homology	CDS	5359	5925	.	-	0	ID=cds-WP_024797679.1;Parent=gene-C9E97_RS18830;Dbxref=GenBank:WP_024797679.1;Name=WP_024797679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460859.1;locus_tag=C9E97_RS18830;product=hydrolase;protein_id=WP_024797679.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	6250	8022	.	+	.	ID=gene-C9E97_RS18835;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=C9E97_RS18835;old_locus_tag=C9E97_19260
NZ_PYKA01000121.1	Protein Homology	CDS	6250	8022	.	+	0	ID=cds-WP_001258633.1;Parent=gene-C9E97_RS18835;Dbxref=GenBank:WP_001258633.1;Name=WP_001258633.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460858.1;locus_tag=C9E97_RS18835;product=aspartate--tRNA ligase;protein_id=WP_001258633.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	8125	8577	.	+	.	ID=gene-C9E97_RS18840;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=C9E97_RS18840;old_locus_tag=C9E97_19265
NZ_PYKA01000121.1	Protein Homology	CDS	8125	8577	.	+	0	ID=cds-WP_000653693.1;Parent=gene-C9E97_RS18840;Dbxref=GenBank:WP_000653693.1;Name=WP_000653693.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460857.1;locus_tag=C9E97_RS18840;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_000653693.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	8607	9347	.	+	.	ID=gene-C9E97_RS18845;Name=C9E97_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18845;old_locus_tag=C9E97_19270
NZ_PYKA01000121.1	Protein Homology	CDS	8607	9347	.	+	0	ID=cds-WP_000907242.1;Parent=gene-C9E97_RS18845;Dbxref=GenBank:WP_000907242.1;Name=WP_000907242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=C9E97_RS18845;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000907242.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	9384	9905	.	+	.	ID=gene-C9E97_RS18850;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=C9E97_RS18850;old_locus_tag=C9E97_19275
NZ_PYKA01000121.1	Protein Homology	CDS	9384	9905	.	+	0	ID=cds-WP_000022510.1;Parent=gene-C9E97_RS18850;Dbxref=GenBank:WP_000022510.1;Name=WP_000022510.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=C9E97_RS18850;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_000022510.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	9936	11432	.	+	.	ID=gene-C9E97_RS18855;Name=C9E97_RS18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18855;old_locus_tag=C9E97_19280
NZ_PYKA01000121.1	Protein Homology	CDS	9936	11432	.	+	0	ID=cds-WP_135369393.1;Parent=gene-C9E97_RS18855;Dbxref=GenBank:WP_135369393.1;Name=WP_135369393.1;Ontology_term=GO:0006817,GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000974705.1;locus_tag=C9E97_RS18855;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_135369393.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	11532	12128	.	-	.	ID=gene-C9E97_RS18860;Name=C9E97_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18860;old_locus_tag=C9E97_19285
NZ_PYKA01000121.1	Protein Homology	CDS	11532	12128	.	-	0	ID=cds-WP_000716751.1;Parent=gene-C9E97_RS18860;Dbxref=GenBank:WP_000716751.1;Name=WP_000716751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716751.1;locus_tag=C9E97_RS18860;product=YebB family permuted papain-like enzyme;protein_id=WP_000716751.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	12338	13030	.	+	.	ID=gene-C9E97_RS18865;Name=C9E97_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18865;old_locus_tag=C9E97_19290
NZ_PYKA01000121.1	Protein Homology	CDS	12338	13030	.	+	0	ID=cds-WP_000227324.1;Parent=gene-C9E97_RS18865;Dbxref=GenBank:WP_000227324.1;Name=WP_000227324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227317.1;locus_tag=C9E97_RS18865;product=hypothetical protein;protein_id=WP_000227324.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	13390	14001	.	+	.	ID=gene-C9E97_RS18870;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=C9E97_RS18870;old_locus_tag=C9E97_19295
NZ_PYKA01000121.1	Protein Homology	CDS	13390	14001	.	+	0	ID=cds-WP_000580335.1;Parent=gene-C9E97_RS18870;Dbxref=GenBank:WP_000580335.1;Name=WP_000580335.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=C9E97_RS18870;product=Holliday junction branch migration protein RuvA;protein_id=WP_000580335.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	14010	15020	.	+	.	ID=gene-C9E97_RS18875;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=C9E97_RS18875;old_locus_tag=C9E97_19300
NZ_PYKA01000121.1	Protein Homology	CDS	14010	15020	.	+	0	ID=cds-WP_000568504.1;Parent=gene-C9E97_RS18875;Dbxref=GenBank:WP_000568504.1;Name=WP_000568504.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460851.1;locus_tag=C9E97_RS18875;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000568504.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	15099	15884	.	-	.	ID=gene-C9E97_RS18880;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=C9E97_RS18880;old_locus_tag=C9E97_19305
NZ_PYKA01000121.1	Protein Homology	CDS	15099	15884	.	-	0	ID=cds-WP_000571508.1;Parent=gene-C9E97_RS18880;Dbxref=GenBank:WP_000571508.1;Name=WP_000571508.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460850.1;locus_tag=C9E97_RS18880;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_000571508.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	15881	16636	.	-	.	ID=gene-C9E97_RS18885;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=C9E97_RS18885;old_locus_tag=C9E97_19310
NZ_PYKA01000121.1	Protein Homology	CDS	15881	16636	.	-	0	ID=cds-WP_000203013.1;Parent=gene-C9E97_RS18885;Dbxref=GenBank:WP_000203013.1;Name=WP_000203013.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=C9E97_RS18885;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_000203013.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	16715	17659	.	+	.	ID=gene-C9E97_RS18890;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=C9E97_RS18890;old_locus_tag=C9E97_19315
NZ_PYKA01000121.1	Protein Homology	CDS	16715	17659	.	+	0	ID=cds-WP_000939597.1;Parent=gene-C9E97_RS18890;Dbxref=GenBank:WP_000939597.1;Name=WP_000939597.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=C9E97_RS18890;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_000939597.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	17675	18994	.	+	.	ID=gene-C9E97_RS18895;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=C9E97_RS18895;old_locus_tag=C9E97_19320
NZ_PYKA01000121.1	Protein Homology	CDS	17675	18994	.	+	0	ID=cds-WP_001184028.1;Parent=gene-C9E97_RS18895;Dbxref=GenBank:WP_001184028.1;Name=WP_001184028.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=C9E97_RS18895;product=murein DD-endopeptidase MepM;protein_id=WP_001184028.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	19111	20082	.	+	.	ID=gene-C9E97_RS18900;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=C9E97_RS18900;old_locus_tag=C9E97_19330
NZ_PYKA01000121.1	Protein Homology	CDS	19111	20082	.	+	0	ID=cds-WP_000448401.1;Parent=gene-C9E97_RS18900;Dbxref=GenBank:WP_000448401.1;Name=WP_000448401.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460846.1;locus_tag=C9E97_RS18900;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_000448401.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	20155	21597	.	-	.	ID=gene-C9E97_RS18905;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=C9E97_RS18905;old_locus_tag=C9E97_19335
NZ_PYKA01000121.1	Protein Homology	CDS	20155	21597	.	-	0	ID=cds-WP_000091156.1;Parent=gene-C9E97_RS18905;Dbxref=GenBank:WP_000091156.1;Name=WP_000091156.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=C9E97_RS18905;product=pyruvate kinase;protein_id=WP_000091156.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	21721	22590	.	-	.	ID=gene-C9E97_RS18910;Name=C9E97_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18910;old_locus_tag=C9E97_19340
NZ_PYKA01000121.1	Protein Homology	CDS	21721	22590	.	-	0	ID=cds-WP_020898861.1;Parent=gene-C9E97_RS18910;Dbxref=GenBank:WP_020898861.1;Name=WP_020898861.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700,GO:0097367;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,carbohydrate derivative binding|0097367||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460844.1;locus_tag=C9E97_RS18910;product=MurR/RpiR family transcriptional regulator;protein_id=WP_020898861.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	22932	24407	.	+	.	ID=gene-C9E97_RS18920;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=C9E97_RS18920;old_locus_tag=C9E97_19350
NZ_PYKA01000121.1	Protein Homology	CDS	22932	24407	.	+	0	ID=cds-WP_000301711.1;Parent=gene-C9E97_RS18920;Dbxref=GenBank:WP_000301711.1;Name=WP_000301711.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=C9E97_RS18920;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000301711.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	24642	26453	.	+	.	ID=gene-C9E97_RS18925;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=C9E97_RS18925;old_locus_tag=C9E97_19355
NZ_PYKA01000121.1	Protein Homology	CDS	24642	26453	.	+	0	ID=cds-WP_001069124.1;Parent=gene-C9E97_RS18925;Dbxref=GenBank:WP_001069124.1;Name=WP_001069124.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460842.1;locus_tag=C9E97_RS18925;product=phosphogluconate dehydratase;protein_id=WP_001069124.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	26491	27132	.	+	.	ID=gene-C9E97_RS18930;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=C9E97_RS18930;old_locus_tag=C9E97_19360
NZ_PYKA01000121.1	Protein Homology	CDS	26491	27132	.	+	0	ID=cds-WP_023243915.1;Parent=gene-C9E97_RS18930;Dbxref=GenBank:WP_023243915.1;Name=WP_023243915.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460841.1;locus_tag=C9E97_RS18930;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_023243915.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	27232	28410	.	-	.	ID=gene-C9E97_RS18935;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=C9E97_RS18935;old_locus_tag=C9E97_19365
NZ_PYKA01000121.1	Protein Homology	CDS	27232	28410	.	-	0	ID=cds-WP_001524392.1;Parent=gene-C9E97_RS18935;Dbxref=GenBank:WP_001524392.1;Name=WP_001524392.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460840.1;locus_tag=C9E97_RS18935;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_001524392.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	28541	28831	.	+	.	ID=gene-C9E97_RS18940;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=C9E97_RS18940;old_locus_tag=C9E97_19370
NZ_PYKA01000121.1	Protein Homology	CDS	28541	28831	.	+	0	ID=cds-WP_000257726.1;Parent=gene-C9E97_RS18940;Dbxref=GenBank:WP_000257726.1;Name=WP_000257726.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460839.1;locus_tag=C9E97_RS18940;product=DNA damage-inducible protein YebG;protein_id=WP_000257726.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	28899	29252	.	+	.	ID=gene-C9E97_RS18945;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=C9E97_RS18945;old_locus_tag=C9E97_19375
NZ_PYKA01000121.1	Protein Homology	CDS	28899	29252	.	+	0	ID=cds-WP_001042123.1;Parent=gene-C9E97_RS18945;Dbxref=GenBank:WP_001042123.1;Name=WP_001042123.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460838.1;locus_tag=C9E97_RS18945;product=protein YebF;protein_id=WP_001042123.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	29346	30005	.	+	.	ID=gene-C9E97_RS18950;Name=C9E97_RS18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18950;old_locus_tag=C9E97_19380
NZ_PYKA01000121.1	Protein Homology	CDS	29346	30005	.	+	0	ID=cds-WP_000024707.1;Parent=gene-C9E97_RS18950;Dbxref=GenBank:WP_000024707.1;Name=WP_000024707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460837.1;locus_tag=C9E97_RS18950;product=tellurite resistance TerB family protein;protein_id=WP_000024707.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	30218	32269	.	+	.	ID=gene-C9E97_RS18955;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=C9E97_RS18955;old_locus_tag=C9E97_19385
NZ_PYKA01000121.1	Protein Homology	CDS	30218	32269	.	+	0	ID=cds-WP_000936999.1;Parent=gene-C9E97_RS18955;Dbxref=GenBank:WP_000936999.1;Name=WP_000936999.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460836.1;locus_tag=C9E97_RS18955;product=oligopeptidase B;protein_id=WP_000936999.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	32306	33004	.	-	.	ID=gene-C9E97_RS18960;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=C9E97_RS18960;old_locus_tag=C9E97_19390
NZ_PYKA01000121.1	Protein Homology	CDS	32306	33004	.	-	0	ID=cds-WP_135369098.1;Parent=gene-C9E97_RS18960;Dbxref=GenBank:WP_135369098.1;Name=WP_135369098.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460835.1;locus_tag=C9E97_RS18960;product=exodeoxyribonuclease X;protein_id=WP_135369098.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	33028	33684	.	-	.	ID=gene-C9E97_RS18965;Name=C9E97_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18965;old_locus_tag=C9E97_19395
NZ_PYKA01000121.1	Protein Homology	CDS	33028	33684	.	-	0	ID=cds-WP_000100257.1;Parent=gene-C9E97_RS18965;Dbxref=GenBank:WP_000100257.1;Name=WP_000100257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460834.1;locus_tag=C9E97_RS18965;product=carbon-nitrogen hydrolase family protein;protein_id=WP_000100257.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	33792	34022	.	-	.	ID=gene-C9E97_RS18970;Name=C9E97_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18970;old_locus_tag=C9E97_19400
NZ_PYKA01000121.1	Protein Homology	CDS	33792	34022	.	-	0	ID=cds-WP_000856224.1;Parent=gene-C9E97_RS18970;Dbxref=GenBank:WP_000856224.1;Name=WP_000856224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460833.1;locus_tag=C9E97_RS18970;product=DNA polymerase III subunit theta;protein_id=WP_000856224.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	34160	34534	.	+	.	ID=gene-C9E97_RS18975;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=C9E97_RS18975;old_locus_tag=C9E97_19405
NZ_PYKA01000121.1	Protein Homology	CDS	34160	34534	.	+	0	ID=cds-WP_000168393.1;Parent=gene-C9E97_RS18975;Dbxref=GenBank:WP_000168393.1;Name=WP_000168393.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460832.1;locus_tag=C9E97_RS18975;product=CopC domain-containing protein YobA;protein_id=WP_000168393.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	34535	35410	.	+	.	ID=gene-C9E97_RS18980;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=C9E97_RS18980;old_locus_tag=C9E97_19410
NZ_PYKA01000121.1	Protein Homology	CDS	34535	35410	.	+	0	ID=cds-WP_000979689.1;Parent=gene-C9E97_RS18980;Dbxref=GenBank:WP_000979689.1;Name=WP_000979689.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460831.1;locus_tag=C9E97_RS18980;product=copper homeostasis membrane protein CopD;protein_id=WP_000979689.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	35427	35780	.	+	.	ID=gene-C9E97_RS18985;Name=C9E97_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18985;old_locus_tag=C9E97_19415
NZ_PYKA01000121.1	Protein Homology	CDS	35427	35780	.	+	0	ID=cds-WP_000722368.1;Parent=gene-C9E97_RS18985;Dbxref=GenBank:WP_000722368.1;Name=WP_000722368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460830.1;locus_tag=C9E97_RS18985;product=YebY family protein;protein_id=WP_000722368.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	pseudogene	36163	36516	.	-	.	ID=gene-C9E97_RS18995;Name=C9E97_RS18995;end_range=36516,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS18995;old_locus_tag=C9E97_19430;partial=true;pseudo=true
NZ_PYKA01000121.1	Protein Homology	CDS	36163	36516	.	-	0	ID=cds-C9E97_RS18995;Parent=gene-C9E97_RS18995;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=36516,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=C9E97_RS18995;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	36778	39075	.	+	.	ID=gene-C9E97_RS19005;Name=C9E97_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19005;old_locus_tag=C9E97_19440
NZ_PYKA01000121.1	Protein Homology	CDS	36778	39075	.	+	0	ID=cds-WP_135495735.1;Parent=gene-C9E97_RS19005;Dbxref=GenBank:WP_135495735.1;Name=WP_135495735.1;Ontology_term=GO:0016567,GO:0004842;gbkey=CDS;go_function=ubiquitin-protein transferase activity|0004842||IEA;go_process=protein ubiquitination|0016567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_052938253.1;locus_tag=C9E97_RS19005;product=NEL-type E3 ubiquitin ligase domain-containing protein;protein_id=WP_135495735.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	pseudogene	39109	39207	.	+	.	ID=gene-C9E97_RS19010;Name=C9E97_RS19010;end_range=39207,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS19010;old_locus_tag=C9E97_19445;partial=true;pseudo=true;start_range=.,39109
NZ_PYKA01000121.1	Protein Homology	CDS	39109	39207	.	+	0	ID=cds-C9E97_RS19010;Parent=gene-C9E97_RS19010;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=39207,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=C9E97_RS19010;partial=true;product=DUF4113 domain-containing protein;pseudo=true;start_range=.,39109;transl_table=11
NZ_PYKA01000121.1	RefSeq	pseudogene	39217	39745	.	+	.	ID=gene-C9E97_RS19015;Name=C9E97_RS19015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS19015;old_locus_tag=C9E97_19450;partial=true;pseudo=true;start_range=.,39217
NZ_PYKA01000121.1	Protein Homology	CDS	39217	39745	.	+	0	ID=cds-C9E97_RS19015;Parent=gene-C9E97_RS19015;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=C9E97_RS19015;partial=true;product=transposase;pseudo=true;start_range=.,39217;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	39891	40031	.	-	.	ID=gene-C9E97_RS19020;Name=C9E97_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19020;old_locus_tag=C9E97_19455
NZ_PYKA01000121.1	Protein Homology	CDS	39891	40031	.	-	0	ID=cds-WP_045899713.1;Parent=gene-C9E97_RS19020;Dbxref=GenBank:WP_045899713.1;Name=WP_045899713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576018.1;locus_tag=C9E97_RS19020;product=hypothetical protein;protein_id=WP_045899713.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	pseudogene	40197	40465	.	-	.	ID=gene-C9E97_RS19025;Name=C9E97_RS19025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS19025;old_locus_tag=C9E97_19460;pseudo=true
NZ_PYKA01000121.1	Protein Homology	CDS	40197	40465	.	-	0	ID=cds-C9E97_RS19025;Parent=gene-C9E97_RS19025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460814.1;locus_tag=C9E97_RS19025;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	40835	41254	.	+	.	ID=gene-C9E97_RS19035;Name=C9E97_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19035;old_locus_tag=C9E97_19470
NZ_PYKA01000121.1	Protein Homology	CDS	40835	41254	.	+	0	ID=cds-WP_080211977.1;Parent=gene-C9E97_RS19035;Dbxref=GenBank:WP_080211977.1;Name=WP_080211977.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460813.1;locus_tag=C9E97_RS19035;product=GNAT family N-acetyltransferase;protein_id=WP_080211977.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	41642	42118	.	-	.	ID=gene-C9E97_RS19040;Name=C9E97_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19040;old_locus_tag=C9E97_19475
NZ_PYKA01000121.1	Protein Homology	CDS	41642	42118	.	-	0	ID=cds-WP_023194965.1;Parent=gene-C9E97_RS19040;Dbxref=GenBank:WP_023194965.1;Name=WP_023194965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000030934.1;locus_tag=C9E97_RS19040;product=hypothetical protein;protein_id=WP_023194965.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	42447	42842	.	-	.	ID=gene-C9E97_RS19045;Name=C9E97_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19045;old_locus_tag=C9E97_19480
NZ_PYKA01000121.1	Protein Homology	CDS	42447	42842	.	-	0	ID=cds-WP_000422887.1;Parent=gene-C9E97_RS19045;Dbxref=GenBank:WP_000422887.1;Name=WP_000422887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460812.1;locus_tag=C9E97_RS19045;product=DUF1398 domain-containing protein;protein_id=WP_000422887.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	43527	44249	.	+	.	ID=gene-C9E97_RS19050;Name=sopE2;gbkey=Gene;gene=sopE2;gene_biotype=protein_coding;locus_tag=C9E97_RS19050;old_locus_tag=C9E97_19485
NZ_PYKA01000121.1	Protein Homology	CDS	43527	44249	.	+	0	ID=cds-WP_135369185.1;Parent=gene-C9E97_RS19050;Dbxref=GenBank:WP_135369185.1;Name=WP_135369185.1;gbkey=CDS;gene=sopE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460811.1;locus_tag=C9E97_RS19050;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE2;protein_id=WP_135369185.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	44534	44698	.	+	.	ID=gene-C9E97_RS19055;Name=C9E97_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19055;old_locus_tag=C9E97_19490
NZ_PYKA01000121.1	Protein Homology	CDS	44534	44698	.	+	0	ID=cds-WP_001134853.1;Parent=gene-C9E97_RS19055;Dbxref=GenBank:WP_001134853.1;Name=WP_001134853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460810.1;locus_tag=C9E97_RS19055;product=hypothetical protein;protein_id=WP_001134853.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	44689	44904	.	+	.	ID=gene-C9E97_RS24115;Name=C9E97_RS24115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS24115
NZ_PYKA01000121.1	Protein Homology	CDS	44689	44904	.	+	0	ID=cds-WP_001662415.1;Parent=gene-C9E97_RS24115;Dbxref=GenBank:WP_001662415.1;Name=WP_001662415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764306.1;locus_tag=C9E97_RS24115;product=hypothetical protein;protein_id=WP_001662415.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	44922	45572	.	+	.	ID=gene-C9E97_RS19060;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=C9E97_RS19060;old_locus_tag=C9E97_19495
NZ_PYKA01000121.1	Protein Homology	CDS	44922	45572	.	+	0	ID=cds-WP_023226864.1;Parent=gene-C9E97_RS19060;Dbxref=GenBank:WP_023226864.1;Name=WP_023226864.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460809.1;locus_tag=C9E97_RS19060;product=protein-serine/threonine phosphatase;protein_id=WP_023226864.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	45591	45782	.	-	.	ID=gene-C9E97_RS19065;Name=C9E97_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19065;old_locus_tag=C9E97_19500
NZ_PYKA01000121.1	Protein Homology	CDS	45591	45782	.	-	0	ID=cds-WP_000457838.1;Parent=gene-C9E97_RS19065;Dbxref=GenBank:WP_000457838.1;Name=WP_000457838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460808.1;locus_tag=C9E97_RS19065;product=YebW family protein;protein_id=WP_000457838.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	45893	46129	.	-	.	ID=gene-C9E97_RS19070;Name=C9E97_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19070;old_locus_tag=C9E97_19505
NZ_PYKA01000121.1	Protein Homology	CDS	45893	46129	.	-	0	ID=cds-WP_024131167.1;Parent=gene-C9E97_RS19070;Dbxref=GenBank:WP_024131167.1;Name=WP_024131167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=C9E97_RS19070;product=YebV family protein;protein_id=WP_024131167.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	46247	47686	.	-	.	ID=gene-C9E97_RS19075;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=C9E97_RS19075;old_locus_tag=C9E97_19510
NZ_PYKA01000121.1	Protein Homology	CDS	46247	47686	.	-	0	ID=cds-WP_135369493.1;Parent=gene-C9E97_RS19075;Dbxref=GenBank:WP_135369493.1;Name=WP_135369493.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460806.1;locus_tag=C9E97_RS19075;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_135369493.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	47764	50397	.	-	.	ID=gene-C9E97_RS19080;Name=C9E97_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19080;old_locus_tag=C9E97_19515
NZ_PYKA01000121.1	Protein Homology	CDS	47764	50397	.	-	0	ID=cds-WP_001521100.1;Parent=gene-C9E97_RS19080;Dbxref=GenBank:WP_001521100.1;Name=WP_001521100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=C9E97_RS19080;product=PqiB family protein;protein_id=WP_001521100.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	50366	51649	.	-	.	ID=gene-C9E97_RS19085;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=C9E97_RS19085;old_locus_tag=C9E97_19520
NZ_PYKA01000121.1	Protein Homology	CDS	50366	51649	.	-	0	ID=cds-WP_001207294.1;Parent=gene-C9E97_RS19085;Dbxref=GenBank:WP_001207294.1;Name=WP_001207294.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460804.1;locus_tag=C9E97_RS19085;product=membrane integrity lipid transport subunit YebS;protein_id=WP_001207294.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	51778	52275	.	+	.	ID=gene-C9E97_RS19090;Name=C9E97_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19090;old_locus_tag=C9E97_19525
NZ_PYKA01000121.1	Protein Homology	CDS	51778	52275	.	+	0	ID=cds-WP_001518229.1;Parent=gene-C9E97_RS19090;Dbxref=GenBank:WP_001518229.1;Name=WP_001518229.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=C9E97_RS19090;product=GAF domain-containing protein;protein_id=WP_001518229.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	52373	53059	.	+	.	ID=gene-C9E97_RS19095;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=C9E97_RS19095;old_locus_tag=C9E97_19530
NZ_PYKA01000121.1	Protein Homology	CDS	52373	53059	.	+	0	ID=cds-WP_000431401.1;Parent=gene-C9E97_RS19095;Dbxref=GenBank:WP_000431401.1;Name=WP_000431401.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460802.1;locus_tag=C9E97_RS19095;product=RNA chaperone ProQ;protein_id=WP_000431401.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	53079	55127	.	+	.	ID=gene-C9E97_RS19100;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=C9E97_RS19100;old_locus_tag=C9E97_19535
NZ_PYKA01000121.1	Protein Homology	CDS	53079	55127	.	+	0	ID=cds-WP_001525059.1;Parent=gene-C9E97_RS19100;Dbxref=GenBank:WP_001525059.1;Name=WP_001525059.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460801.1;locus_tag=C9E97_RS19100;product=carboxy terminal-processing peptidase;protein_id=WP_001525059.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	55321	56202	.	+	.	ID=gene-C9E97_RS19105;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=C9E97_RS19105;old_locus_tag=C9E97_19540
NZ_PYKA01000121.1	Protein Homology	CDS	55321	56202	.	+	0	ID=cds-WP_000984498.1;Parent=gene-C9E97_RS19105;Dbxref=GenBank:WP_000984498.1;Name=WP_000984498.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=C9E97_RS19105;product=protease HtpX;protein_id=WP_000984498.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	56250	57623	.	-	.	ID=gene-C9E97_RS19110;Name=C9E97_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19110;old_locus_tag=C9E97_19545
NZ_PYKA01000121.1	Protein Homology	CDS	56250	57623	.	-	0	ID=cds-WP_135369492.1;Parent=gene-C9E97_RS19110;Dbxref=GenBank:WP_135369492.1;Name=WP_135369492.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460799.1;locus_tag=C9E97_RS19110;product=MFS transporter;protein_id=WP_135369492.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	57799	58590	.	+	.	ID=gene-C9E97_RS19115;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=C9E97_RS19115;old_locus_tag=C9E97_19550
NZ_PYKA01000121.1	Protein Homology	CDS	57799	58590	.	+	0	ID=cds-WP_001262195.1;Parent=gene-C9E97_RS19115;Dbxref=GenBank:WP_001262195.1;Name=WP_001262195.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460798.1;locus_tag=C9E97_RS19115;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_001262195.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	58802	59041	.	-	.	ID=gene-C9E97_RS19120;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=C9E97_RS19120;old_locus_tag=C9E97_19555
NZ_PYKA01000121.1	Protein Homology	CDS	58802	59041	.	-	0	ID=cds-WP_001236776.1;Parent=gene-C9E97_RS19120;Dbxref=GenBank:WP_001236776.1;Name=WP_001236776.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460797.1;locus_tag=C9E97_RS19120;product=invasion protein YobH;protein_id=WP_001236776.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	59199	59342	.	+	.	ID=gene-C9E97_RS19125;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=C9E97_RS19125;old_locus_tag=C9E97_19560
NZ_PYKA01000121.1	Protein Homology	CDS	59199	59342	.	+	0	ID=cds-WP_000714547.1;Parent=gene-C9E97_RS19125;Dbxref=GenBank:WP_000714547.1;Name=WP_000714547.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460796.1;locus_tag=C9E97_RS19125;product=PhoP/PhoQ regulator MgrB;protein_id=WP_000714547.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	59413	59700	.	+	.	ID=gene-C9E97_RS19130;Name=C9E97_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19130;old_locus_tag=C9E97_19565
NZ_PYKA01000121.1	Protein Homology	CDS	59413	59700	.	+	0	ID=cds-WP_001000660.1;Parent=gene-C9E97_RS19130;Dbxref=GenBank:WP_001000660.1;Name=WP_001000660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460795.1;locus_tag=C9E97_RS19130;product=YebO family protein;protein_id=WP_001000660.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	60349	60519	.	+	.	ID=gene-C9E97_RS19135;Name=C9E97_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19135;old_locus_tag=C9E97_19570
NZ_PYKA01000121.1	Protein Homology	CDS	60349	60519	.	+	0	ID=cds-WP_135369514.1;Parent=gene-C9E97_RS19135;Dbxref=GenBank:WP_135369514.1;Name=WP_135369514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460794.1;locus_tag=C9E97_RS19135;product=DUF2627 domain-containing protein;protein_id=WP_135369514.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	60506	60715	.	+	.	ID=gene-C9E97_RS19140;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=C9E97_RS19140;old_locus_tag=C9E97_19575
NZ_PYKA01000121.1	Protein Homology	CDS	60506	60715	.	+	0	ID=cds-WP_001062678.1;Parent=gene-C9E97_RS19140;Dbxref=GenBank:WP_001062678.1;Name=WP_001062678.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=C9E97_RS19140;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	60935	62680	.	+	.	ID=gene-C9E97_RS19145;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=C9E97_RS19145;old_locus_tag=C9E97_19580
NZ_PYKA01000121.1	Protein Homology	CDS	60935	62680	.	+	0	ID=cds-WP_000730322.1;Parent=gene-C9E97_RS19145;Dbxref=GenBank:WP_000730322.1;Name=WP_000730322.1;Ontology_term=GO:0009252,GO:0051301,GO:0008658,GO:0008955,GO:0005886;gbkey=CDS;gene=ftsI;go_component=plasma membrane|0005886||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460792.1;locus_tag=C9E97_RS19145;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000730322.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	62746	63555	.	+	.	ID=gene-C9E97_RS19150;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=C9E97_RS19150;old_locus_tag=C9E97_19585
NZ_PYKA01000121.1	Protein Homology	CDS	62746	63555	.	+	0	ID=cds-WP_000010923.1;Parent=gene-C9E97_RS19150;Dbxref=GenBank:WP_000010923.1;Name=WP_000010923.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460791.1;locus_tag=C9E97_RS19150;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_000010923.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	63552	64118	.	-	.	ID=gene-C9E97_RS19155;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=C9E97_RS19155;old_locus_tag=C9E97_19590
NZ_PYKA01000121.1	Protein Homology	CDS	63552	64118	.	-	0	ID=cds-WP_001518359.1;Parent=gene-C9E97_RS19155;Dbxref=GenBank:WP_001518359.1;Name=WP_001518359.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=C9E97_RS19155;product=manganese efflux pump MntP;protein_id=WP_001518359.1;transl_table=11
NZ_PYKA01000121.1	cmsearch	riboswitch	64230	64331	.	-	.	ID=id-NZ_PYKA01000121.1:64230..64331;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PYKA01000121.1	RefSeq	gene	64528	64986	.	-	.	ID=gene-C9E97_RS19160;Name=C9E97_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19160;old_locus_tag=C9E97_19600
NZ_PYKA01000121.1	Protein Homology	CDS	64528	64986	.	-	0	ID=cds-WP_000156280.1;Parent=gene-C9E97_RS19160;Dbxref=GenBank:WP_000156280.1;Name=WP_000156280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=C9E97_RS19160;product=DUF986 family protein;protein_id=WP_000156280.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	65045	65896	.	-	.	ID=gene-C9E97_RS19165;Name=C9E97_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19165;old_locus_tag=C9E97_19605
NZ_PYKA01000121.1	Protein Homology	CDS	65045	65896	.	-	0	ID=cds-WP_001518647.1;Parent=gene-C9E97_RS19165;Dbxref=GenBank:WP_001518647.1;Name=WP_001518647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228151.1;locus_tag=C9E97_RS19165;product=PTS mannose transporter subunit IID;protein_id=WP_001518647.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	65909	66709	.	-	.	ID=gene-C9E97_RS19170;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=C9E97_RS19170;old_locus_tag=C9E97_19610
NZ_PYKA01000121.1	Protein Homology	CDS	65909	66709	.	-	0	ID=cds-WP_000406920.1;Parent=gene-C9E97_RS19170;Dbxref=GenBank:WP_000406920.1;Name=WP_000406920.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=C9E97_RS19170;product=PTS mannose transporter subunit IIC;protein_id=WP_000406920.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	66762	67730	.	-	.	ID=gene-C9E97_RS19175;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=C9E97_RS19175;old_locus_tag=C9E97_19615
NZ_PYKA01000121.1	Protein Homology	CDS	66762	67730	.	-	0	ID=cds-WP_000150521.1;Parent=gene-C9E97_RS19175;Dbxref=GenBank:WP_000150521.1;Name=WP_000150521.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460786.1;locus_tag=C9E97_RS19175;product=PTS mannose transporter subunit IIAB;protein_id=WP_000150521.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	68048	68215	.	+	.	ID=gene-C9E97_RS24120;Name=C9E97_RS24120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS24120
NZ_PYKA01000121.1	Protein Homology	CDS	68048	68215	.	+	0	ID=cds-WP_371061794.1;Parent=gene-C9E97_RS24120;Dbxref=GenBank:WP_371061794.1;Name=WP_371061794.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046943.2;locus_tag=C9E97_RS24120;product=protein YoaL;protein_id=WP_371061794.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	68203	69762	.	+	.	ID=gene-C9E97_RS19180;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=C9E97_RS19180;old_locus_tag=C9E97_19625
NZ_PYKA01000121.1	Protein Homology	CDS	68203	69762	.	+	0	ID=cds-WP_000421820.1;Parent=gene-C9E97_RS19180;Dbxref=GenBank:WP_000421820.1;Name=WP_000421820.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460784.2;locus_tag=C9E97_RS19180;product=CNNM family cation transport protein YoaE;protein_id=WP_000421820.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	69784	71385	.	-	.	ID=gene-C9E97_RS19185;Name=C9E97_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19185;old_locus_tag=C9E97_19630
NZ_PYKA01000121.1	Protein Homology	CDS	69784	71385	.	-	0	ID=cds-WP_001192535.1;Parent=gene-C9E97_RS19185;Dbxref=GenBank:WP_001192535.1;Name=WP_001192535.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192512.1;locus_tag=C9E97_RS19185;product=EAL domain-containing protein;protein_id=WP_001192535.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	71523	72887	.	-	.	ID=gene-C9E97_RS19190;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=C9E97_RS19190;old_locus_tag=C9E97_19635
NZ_PYKA01000121.1	Protein Homology	CDS	71523	72887	.	-	0	ID=cds-WP_000624277.1;Parent=gene-C9E97_RS19190;Dbxref=GenBank:WP_000624277.1;Name=WP_000624277.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460782.1;locus_tag=C9E97_RS19190;product=L-serine ammonia-lyase;protein_id=WP_000624277.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	73151	73729	.	-	.	ID=gene-C9E97_RS19195;Name=C9E97_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19195;old_locus_tag=C9E97_19640
NZ_PYKA01000121.1	Protein Homology	CDS	73151	73729	.	-	0	ID=cds-WP_000381544.1;Parent=gene-C9E97_RS19195;Dbxref=GenBank:WP_000381544.1;Name=WP_000381544.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460781.1;locus_tag=C9E97_RS19195;product=CoA pyrophosphatase;protein_id=WP_000381544.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	73733	75097	.	-	.	ID=gene-C9E97_RS19200;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=C9E97_RS19200;old_locus_tag=C9E97_19645
NZ_PYKA01000121.1	Protein Homology	CDS	73733	75097	.	-	0	ID=cds-WP_079980658.1;Parent=gene-C9E97_RS19200;Dbxref=GenBank:WP_079980658.1;Name=WP_079980658.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460780.1;locus_tag=C9E97_RS19200;product=aminodeoxychorismate synthase component 1;protein_id=WP_079980658.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	75178	75357	.	+	.	ID=gene-C9E97_RS19205;Name=C9E97_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19205;old_locus_tag=C9E97_19650
NZ_PYKA01000121.1	Protein Homology	CDS	75178	75357	.	+	0	ID=cds-WP_000457328.1;Parent=gene-C9E97_RS19205;Dbxref=GenBank:WP_000457328.1;Name=WP_000457328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460779.1;locus_tag=C9E97_RS19205;product=YoaH family protein;protein_id=WP_000457328.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	75363	75707	.	-	.	ID=gene-C9E97_RS19210;Name=C9E97_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19210;old_locus_tag=C9E97_19655
NZ_PYKA01000121.1	Protein Homology	CDS	75363	75707	.	-	0	ID=cds-WP_000029550.1;Parent=gene-C9E97_RS19210;Dbxref=GenBank:WP_000029550.1;Name=WP_000029550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460778.1;locus_tag=C9E97_RS19210;product=RidA family protein;protein_id=WP_000029550.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	75838	77748	.	+	.	ID=gene-C9E97_RS19215;Name=C9E97_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19215;old_locus_tag=C9E97_19660
NZ_PYKA01000121.1	Protein Homology	CDS	75838	77748	.	+	0	ID=cds-WP_000128807.1;Parent=gene-C9E97_RS19215;Dbxref=GenBank:WP_000128807.1;Name=WP_000128807.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460777.1;locus_tag=C9E97_RS19215;product=ATP-dependent DNA helicase;protein_id=WP_000128807.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	77806	78501	.	+	.	ID=gene-C9E97_RS19220;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=C9E97_RS19220;old_locus_tag=C9E97_19665
NZ_PYKA01000121.1	Protein Homology	CDS	77806	78501	.	+	0	ID=cds-WP_001221017.1;Parent=gene-C9E97_RS19220;Dbxref=GenBank:WP_001221017.1;Name=WP_001221017.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460776.1;locus_tag=C9E97_RS19220;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_001221017.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	78573	79154	.	+	.	ID=gene-C9E97_RS19225;Name=C9E97_RS19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19225;old_locus_tag=C9E97_19670
NZ_PYKA01000121.1	Protein Homology	CDS	78573	79154	.	+	0	ID=cds-WP_135369661.1;Parent=gene-C9E97_RS19225;Dbxref=GenBank:WP_135369661.1;Name=WP_135369661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460775.1;locus_tag=C9E97_RS19225;product=Slp family lipoprotein;protein_id=WP_135369661.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	79359	81044	.	+	.	ID=gene-C9E97_RS19230;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=C9E97_RS19230;old_locus_tag=C9E97_19680
NZ_PYKA01000121.1	Protein Homology	CDS	79359	81044	.	+	0	ID=cds-WP_000758418.1;Parent=gene-C9E97_RS19230;Dbxref=GenBank:WP_000758418.1;Name=WP_000758418.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460774.1;locus_tag=C9E97_RS19230;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_000758418.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	81117	82244	.	+	.	ID=gene-C9E97_RS19235;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=C9E97_RS19235;old_locus_tag=C9E97_19685
NZ_PYKA01000121.1	Protein Homology	CDS	81117	82244	.	+	0	ID=cds-WP_062946333.1;Parent=gene-C9E97_RS19235;Dbxref=GenBank:WP_062946333.1;Name=WP_062946333.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416318.1;locus_tag=C9E97_RS19235;product=ribonuclease D;protein_id=WP_062946333.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	82365	82631	.	-	.	ID=gene-C9E97_RS19240;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=C9E97_RS19240;old_locus_tag=C9E97_19690
NZ_PYKA01000121.1	Protein Homology	CDS	82365	82631	.	-	0	ID=cds-WP_001185666.1;Parent=gene-C9E97_RS19240;Dbxref=GenBank:WP_001185666.1;Name=WP_001185666.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460772.1;locus_tag=C9E97_RS19240;product=cell division topological specificity factor MinE;protein_id=WP_001185666.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	82635	83447	.	-	.	ID=gene-C9E97_RS19245;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=C9E97_RS19245;old_locus_tag=C9E97_19695
NZ_PYKA01000121.1	Protein Homology	CDS	82635	83447	.	-	0	ID=cds-WP_000101047.1;Parent=gene-C9E97_RS19245;Dbxref=GenBank:WP_000101047.1;Name=WP_000101047.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=C9E97_RS19245;product=septum site-determining protein MinD;protein_id=WP_000101047.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	83471	84178	.	-	.	ID=gene-C9E97_RS19250;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=C9E97_RS19250;old_locus_tag=C9E97_19700
NZ_PYKA01000121.1	Protein Homology	CDS	83471	84178	.	-	0	ID=cds-WP_000072527.1;Parent=gene-C9E97_RS19250;Dbxref=GenBank:WP_000072527.1;Name=WP_000072527.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460770.1;locus_tag=C9E97_RS19250;product=septum site-determining protein MinC;protein_id=WP_000072527.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	84304	84597	.	+	.	ID=gene-C9E97_RS19255;Name=C9E97_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19255;old_locus_tag=C9E97_19705
NZ_PYKA01000121.1	Protein Homology	CDS	84304	84597	.	+	0	ID=cds-WP_001670513.1;Parent=gene-C9E97_RS19255;Dbxref=GenBank:WP_001670513.1;Name=WP_001670513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=C9E97_RS19255;product=YcgL domain-containing protein;protein_id=WP_001670513.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	84647	85306	.	+	.	ID=gene-C9E97_RS19260;Name=C9E97_RS19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19260;old_locus_tag=C9E97_19710
NZ_PYKA01000121.1	Protein Homology	CDS	84647	85306	.	+	0	ID=cds-WP_001519895.1;Parent=gene-C9E97_RS19260;Dbxref=GenBank:WP_001519895.1;Name=WP_001519895.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460768.1;locus_tag=C9E97_RS19260;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_001519895.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	85399	85845	.	+	.	ID=gene-C9E97_RS19265;Name=C9E97_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19265;old_locus_tag=C9E97_19715
NZ_PYKA01000121.1	Protein Homology	CDS	85399	85845	.	+	0	ID=cds-WP_001285703.1;Parent=gene-C9E97_RS19265;Dbxref=GenBank:WP_001285703.1;Name=WP_001285703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=C9E97_RS19265;product=YcgN family cysteine cluster protein;protein_id=WP_001285703.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	86197	86334	.	+	.	ID=gene-C9E97_RS19270;Name=C9E97_RS19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19270;old_locus_tag=C9E97_19720
NZ_PYKA01000121.1	Protein Homology	CDS	86197	86334	.	+	0	ID=cds-WP_001519337.1;Parent=gene-C9E97_RS19270;Dbxref=GenBank:WP_001519337.1;Name=WP_001519337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460766.1;locus_tag=C9E97_RS19270;product=hypothetical protein;protein_id=WP_001519337.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	86526	86699	.	+	.	ID=gene-C9E97_RS19275;Name=C9E97_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19275;old_locus_tag=C9E97_19725
NZ_PYKA01000121.1	Protein Homology	CDS	86526	86699	.	+	0	ID=cds-WP_001083582.1;Parent=gene-C9E97_RS19275;Dbxref=GenBank:WP_001083582.1;Name=WP_001083582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460765.1;locus_tag=C9E97_RS19275;product=GnsA/GnsB family addiction module toxin;protein_id=WP_001083582.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	86771	87112	.	-	.	ID=gene-C9E97_RS19280;Name=C9E97_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19280;old_locus_tag=C9E97_19730
NZ_PYKA01000121.1	Protein Homology	CDS	86771	87112	.	-	0	ID=cds-WP_000018967.1;Parent=gene-C9E97_RS19280;Dbxref=GenBank:WP_000018967.1;Name=WP_000018967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460764.1;locus_tag=C9E97_RS19280;product=DUF1971 domain-containing protein;protein_id=WP_000018967.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	87221	87751	.	-	.	ID=gene-C9E97_RS19285;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=C9E97_RS19285;old_locus_tag=C9E97_19735
NZ_PYKA01000121.1	Protein Homology	CDS	87221	87751	.	-	0	ID=cds-WP_000943475.1;Parent=gene-C9E97_RS19285;Dbxref=GenBank:WP_000943475.1;Name=WP_000943475.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460763.1;locus_tag=C9E97_RS19285;product=disulfide bond formation protein DsbB;protein_id=WP_000943475.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	87893	89437	.	-	.	ID=gene-C9E97_RS19290;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=C9E97_RS19290;old_locus_tag=C9E97_19740
NZ_PYKA01000121.1	Protein Homology	CDS	87893	89437	.	-	0	ID=cds-WP_000406438.1;Parent=gene-C9E97_RS19290;Dbxref=GenBank:WP_000406438.1;Name=WP_000406438.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460762.1;locus_tag=C9E97_RS19290;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_000406438.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	89657	90376	.	+	.	ID=gene-C9E97_RS19295;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=C9E97_RS19295;old_locus_tag=C9E97_19745
NZ_PYKA01000121.1	Protein Homology	CDS	89657	90376	.	+	0	ID=cds-WP_000234826.1;Parent=gene-C9E97_RS19295;Dbxref=GenBank:WP_000234826.1;Name=WP_000234826.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460761.1;locus_tag=C9E97_RS19295;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_000234826.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	90423	91955	.	-	.	ID=gene-C9E97_RS19300;Name=C9E97_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19300;old_locus_tag=C9E97_19750
NZ_PYKA01000121.1	Protein Homology	CDS	90423	91955	.	-	0	ID=cds-WP_001240762.1;Parent=gene-C9E97_RS19300;Dbxref=GenBank:WP_001240762.1;Name=WP_001240762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460760.3;locus_tag=C9E97_RS19300;product=SpoVR family protein;protein_id=WP_001240762.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	92278	93576	.	+	.	ID=gene-C9E97_RS19305;Name=C9E97_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19305;old_locus_tag=C9E97_19755
NZ_PYKA01000121.1	Protein Homology	CDS	92278	93576	.	+	0	ID=cds-WP_001266938.1;Parent=gene-C9E97_RS19305;Dbxref=GenBank:WP_001266938.1;Name=WP_001266938.1;Ontology_term=GO:0055130,GO:0008718,GO:0016491,GO:0071949;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;go_process=D-alanine catabolic process|0055130||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460759.1;locus_tag=C9E97_RS19305;product=D-amino acid dehydrogenase;protein_id=WP_001266938.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	93590	94660	.	+	.	ID=gene-C9E97_RS19310;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=C9E97_RS19310;old_locus_tag=C9E97_19760
NZ_PYKA01000121.1	Protein Homology	CDS	93590	94660	.	+	0	ID=cds-WP_023138816.1;Parent=gene-C9E97_RS19310;Dbxref=GenBank:WP_023138816.1;Name=WP_023138816.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460758.1;locus_tag=C9E97_RS19310;product=catabolic alanine racemase DadX;protein_id=WP_023138816.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	pseudogene	94665	94784	.	+	.	ID=gene-C9E97_RS24125;Name=C9E97_RS24125;end_range=94784,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS24125;partial=true;pseudo=true
NZ_PYKA01000121.1	Protein Homology	CDS	94665	94784	.	+	0	ID=cds-C9E97_RS24125;Parent=gene-C9E97_RS24125;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=94784,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049075.1;locus_tag=C9E97_RS24125;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKA01000121.1	RefSeq	pseudogene	94740	96455	.	-	.	ID=gene-C9E97_RS19315;Name=C9E97_RS19315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS19315;old_locus_tag=C9E97_19765;partial=true;pseudo=true;start_range=.,94740
NZ_PYKA01000121.1	Protein Homology	CDS	94740	96455	.	-	0	ID=cds-C9E97_RS19315;Parent=gene-C9E97_RS19315;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF003714.0;locus_tag=C9E97_RS19315;partial=true;product=potassium/proton antiporter;pseudo=true;start_range=.,94740;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	96552	97466	.	-	.	ID=gene-C9E97_RS19320;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=C9E97_RS19320;old_locus_tag=C9E97_19770
NZ_PYKA01000121.1	Protein Homology	CDS	96552	97466	.	-	0	ID=cds-WP_023260327.1;Parent=gene-C9E97_RS19320;Dbxref=GenBank:WP_023260327.1;Name=WP_023260327.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460756.1;locus_tag=C9E97_RS19320;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_023260327.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	97637	98248	.	+	.	ID=gene-C9E97_RS19325;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=C9E97_RS19325;old_locus_tag=C9E97_19775
NZ_PYKA01000121.1	Protein Homology	CDS	97637	98248	.	+	0	ID=cds-WP_000776974.1;Parent=gene-C9E97_RS19325;Dbxref=GenBank:WP_000776974.1;Name=WP_000776974.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460755.1;locus_tag=C9E97_RS19325;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_000776974.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	98262	98996	.	-	.	ID=gene-C9E97_RS19330;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=C9E97_RS19330;old_locus_tag=C9E97_19780
NZ_PYKA01000121.1	Protein Homology	CDS	98262	98996	.	-	0	ID=cds-WP_000017414.1;Parent=gene-C9E97_RS19330;Dbxref=GenBank:WP_000017414.1;Name=WP_000017414.1;Ontology_term=GO:0071945,GO:0035438;gbkey=CDS;gene=ycgR;go_function=cyclic-di-GMP binding|0035438||IEA;go_process=regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed|0071945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=C9E97_RS19330;product=flagellar brake protein YcgR;protein_id=WP_000017414.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	99165	99419	.	+	.	ID=gene-C9E97_RS19335;Name=C9E97_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19335;old_locus_tag=C9E97_19785
NZ_PYKA01000121.1	Protein Homology	CDS	99165	99419	.	+	0	ID=cds-WP_000511323.1;Parent=gene-C9E97_RS19335;Dbxref=GenBank:WP_000511323.1;Name=WP_000511323.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460753.1;locus_tag=C9E97_RS19335;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000511323.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	99482	101194	.	-	.	ID=gene-C9E97_RS19340;Name=C9E97_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19340;old_locus_tag=C9E97_19790
NZ_PYKA01000121.1	Protein Homology	CDS	99482	101194	.	-	0	ID=cds-WP_064047394.1;Parent=gene-C9E97_RS19340;Dbxref=GenBank:WP_064047394.1;Name=WP_064047394.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=C9E97_RS19340;product=alpha%2Calpha-trehalase;protein_id=WP_064047394.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	101408	102682	.	-	.	ID=gene-C9E97_RS19345;Name=C9E97_RS19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19345;old_locus_tag=C9E97_19795
NZ_PYKA01000121.1	Protein Homology	CDS	101408	102682	.	-	0	ID=cds-WP_001519734.1;Parent=gene-C9E97_RS19345;Dbxref=GenBank:WP_001519734.1;Name=WP_001519734.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=C9E97_RS19345;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_001519734.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	103077	103166	.	-	.	ID=gene-C9E97_RS19350;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=C9E97_RS19350;old_locus_tag=C9E97_19800
NZ_PYKA01000121.1	Protein Homology	CDS	103077	103166	.	-	0	ID=cds-WP_000270301.1;Parent=gene-C9E97_RS19350;Dbxref=GenBank:WP_000270301.1;Name=WP_000270301.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460750.1;locus_tag=C9E97_RS19350;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WP_000270301.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	103179	104315	.	-	.	ID=gene-C9E97_RS19355;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=C9E97_RS19355;old_locus_tag=C9E97_19805
NZ_PYKA01000121.1	Protein Homology	CDS	103179	104315	.	-	0	ID=cds-WP_000888110.1;Parent=gene-C9E97_RS19355;Dbxref=GenBank:WP_000888110.1;Name=WP_000888110.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460749.1;locus_tag=C9E97_RS19355;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000888110.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	104327	105871	.	-	.	ID=gene-C9E97_RS19360;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=C9E97_RS19360;old_locus_tag=C9E97_19810
NZ_PYKA01000121.1	Protein Homology	CDS	104327	105871	.	-	0	ID=cds-WP_000263615.1;Parent=gene-C9E97_RS19360;Dbxref=GenBank:WP_000263615.1;Name=WP_000263615.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460748.1;locus_tag=C9E97_RS19360;product=cytochrome bd-II oxidase subunit 1;protein_id=WP_000263615.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	105946	106794	.	-	.	ID=gene-C9E97_RS19365;Name=C9E97_RS19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19365;old_locus_tag=C9E97_19815
NZ_PYKA01000121.1	Protein Homology	CDS	105946	106794	.	-	0	ID=cds-WP_000063377.1;Parent=gene-C9E97_RS19365;Dbxref=GenBank:WP_000063377.1;Name=WP_000063377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460747.1;locus_tag=C9E97_RS19365;product=hydrogenase expression/formation protein;protein_id=WP_000063377.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	106791	107195	.	-	.	ID=gene-C9E97_RS19370;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=C9E97_RS19370;old_locus_tag=C9E97_19820
NZ_PYKA01000121.1	Protein Homology	CDS	106791	107195	.	-	0	ID=cds-WP_001262580.1;Parent=gene-C9E97_RS19370;Dbxref=GenBank:WP_001262580.1;Name=WP_001262580.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460746.1;locus_tag=C9E97_RS19370;product=hydrogenase-1 operon protein HyaE;protein_id=WP_001262580.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	107185	107781	.	-	.	ID=gene-C9E97_RS19375;Name=hyaD;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;locus_tag=C9E97_RS19375;old_locus_tag=C9E97_19825
NZ_PYKA01000121.1	Protein Homology	CDS	107185	107781	.	-	0	ID=cds-WP_135369660.1;Parent=gene-C9E97_RS19375;Dbxref=GenBank:WP_135369660.1;Name=WP_135369660.1;gbkey=CDS;gene=hyaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460745.1;locus_tag=C9E97_RS19375;product=hydrogenase 1 maturation protease;protein_id=WP_135369660.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	107778	108509	.	-	.	ID=gene-C9E97_RS19380;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=C9E97_RS19380;old_locus_tag=C9E97_19830
NZ_PYKA01000121.1	Protein Homology	CDS	107778	108509	.	-	0	ID=cds-WP_000147036.1;Parent=gene-C9E97_RS19380;Dbxref=GenBank:WP_000147036.1;Name=WP_000147036.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460744.1;locus_tag=C9E97_RS19380;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_000147036.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	108528	110321	.	-	.	ID=gene-C9E97_RS19385;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=C9E97_RS19385;old_locus_tag=C9E97_19835
NZ_PYKA01000121.1	Protein Homology	CDS	108528	110321	.	-	0	ID=cds-WP_000070982.1;Parent=gene-C9E97_RS19385;Dbxref=GenBank:WP_000070982.1;Name=WP_000070982.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460743.1;locus_tag=C9E97_RS19385;product=Ni/Fe-hydrogenase large subunit;protein_id=WP_000070982.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	110318	111436	.	-	.	ID=gene-C9E97_RS19390;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=C9E97_RS19390;old_locus_tag=C9E97_19840
NZ_PYKA01000121.1	Protein Homology	CDS	110318	111436	.	-	0	ID=cds-WP_001058312.1;Parent=gene-C9E97_RS19390;Dbxref=GenBank:WP_001058312.1;Name=WP_001058312.1;gbkey=CDS;gene=hyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460742.1;locus_tag=C9E97_RS19390;product=hydrogenase 1 small subunit;protein_id=WP_001058312.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	111931	113196	.	+	.	ID=gene-C9E97_RS19395;Name=C9E97_RS19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19395;old_locus_tag=C9E97_19845
NZ_PYKA01000121.1	Protein Homology	CDS	111931	113196	.	+	0	ID=cds-WP_135420034.1;Parent=gene-C9E97_RS19395;Dbxref=GenBank:WP_135420034.1;Name=WP_135420034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460741.1;locus_tag=C9E97_RS19395;product=DUF4427 domain-containing protein;protein_id=WP_135420034.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	113680	114135	.	-	.	ID=gene-C9E97_RS19400;Name=C9E97_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19400;old_locus_tag=C9E97_19855
NZ_PYKA01000121.1	Protein Homology	CDS	113680	114135	.	-	0	ID=cds-WP_000487337.1;Parent=gene-C9E97_RS19400;Dbxref=GenBank:WP_000487337.1;Name=WP_000487337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487332.1;locus_tag=C9E97_RS19400;product=hypothetical protein;protein_id=WP_000487337.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	114174	114794	.	-	.	ID=gene-C9E97_RS19405;Name=C9E97_RS19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19405;old_locus_tag=C9E97_19860
NZ_PYKA01000121.1	Protein Homology	CDS	114174	114794	.	-	0	ID=cds-WP_186799079.1;Parent=gene-C9E97_RS19405;Dbxref=GenBank:WP_186799079.1;Name=WP_186799079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376822.1;locus_tag=C9E97_RS19405;product=hypothetical protein;protein_id=WP_186799079.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	115551	116642	.	-	.	ID=gene-C9E97_RS19410;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=C9E97_RS19410;old_locus_tag=C9E97_19865
NZ_PYKA01000121.1	Protein Homology	CDS	115551	116642	.	-	0	ID=cds-WP_000505850.1;Parent=gene-C9E97_RS19410;Dbxref=GenBank:WP_000505850.1;Name=WP_000505850.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=C9E97_RS19410;product=redox-regulated ATPase YchF;protein_id=WP_000505850.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	116759	117343	.	-	.	ID=gene-C9E97_RS19415;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=C9E97_RS19415;old_locus_tag=C9E97_19870
NZ_PYKA01000121.1	Protein Homology	CDS	116759	117343	.	-	0	ID=cds-WP_000985595.1;Parent=gene-C9E97_RS19415;Dbxref=GenBank:WP_000985595.1;Name=WP_000985595.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=C9E97_RS19415;product=aminoacyl-tRNA hydrolase;protein_id=WP_000985595.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	117619	117897	.	+	.	ID=gene-C9E97_RS19420;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=C9E97_RS19420;old_locus_tag=C9E97_19875
NZ_PYKA01000121.1	Protein Homology	CDS	117619	117897	.	+	0	ID=cds-WP_000823879.1;Parent=gene-C9E97_RS19420;Dbxref=GenBank:WP_000823879.1;Name=WP_000823879.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460738.1;locus_tag=C9E97_RS19420;product=stress-induced protein YchH;protein_id=WP_000823879.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	117942	119627	.	-	.	ID=gene-C9E97_RS19425;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=C9E97_RS19425;old_locus_tag=C9E97_19880
NZ_PYKA01000121.1	Protein Homology	CDS	117942	119627	.	-	0	ID=cds-WP_001037181.1;Parent=gene-C9E97_RS19425;Dbxref=GenBank:WP_001037181.1;Name=WP_001037181.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525165.1;locus_tag=C9E97_RS19425;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_001037181.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	119752	120699	.	-	.	ID=gene-C9E97_RS19430;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=C9E97_RS19430;old_locus_tag=C9E97_19885
NZ_PYKA01000121.1	Protein Homology	CDS	119752	120699	.	-	0	ID=cds-WP_001518537.1;Parent=gene-C9E97_RS19430;Dbxref=GenBank:WP_001518537.1;Name=WP_001518537.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=C9E97_RS19430;product=ribose-phosphate diphosphokinase;protein_id=WP_001518537.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	120965	121816	.	-	.	ID=gene-C9E97_RS19435;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=C9E97_RS19435;old_locus_tag=C9E97_19890
NZ_PYKA01000121.1	Protein Homology	CDS	120965	121816	.	-	0	ID=cds-WP_000988246.1;Parent=gene-C9E97_RS19435;Dbxref=GenBank:WP_000988246.1;Name=WP_000988246.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460735.1;locus_tag=C9E97_RS19435;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_000988246.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	121813	122436	.	-	.	ID=gene-C9E97_RS19440;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=C9E97_RS19440;old_locus_tag=C9E97_19895
NZ_PYKA01000121.1	Protein Homology	CDS	121813	122436	.	-	0	ID=cds-WP_000174484.1;Parent=gene-C9E97_RS19440;Dbxref=GenBank:WP_000174484.1;Name=WP_000174484.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460734.1;locus_tag=C9E97_RS19440;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_000174484.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	122750	124006	.	+	.	ID=gene-C9E97_RS19445;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=C9E97_RS19445;old_locus_tag=C9E97_19900
NZ_PYKA01000121.1	Protein Homology	CDS	122750	124006	.	+	0	ID=cds-WP_000173208.1;Parent=gene-C9E97_RS19445;Dbxref=GenBank:WP_000173208.1;Name=WP_000173208.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=C9E97_RS19445;product=glutamyl-tRNA reductase;protein_id=WP_000173208.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	124047	125129	.	+	.	ID=gene-C9E97_RS19450;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=C9E97_RS19450;old_locus_tag=C9E97_19905
NZ_PYKA01000121.1	Protein Homology	CDS	124047	125129	.	+	0	ID=cds-WP_000804703.1;Parent=gene-C9E97_RS19450;Dbxref=GenBank:WP_000804703.1;Name=WP_000804703.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=C9E97_RS19450;product=peptide chain release factor 1;protein_id=WP_000804703.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	125129	125962	.	+	.	ID=gene-C9E97_RS19455;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=C9E97_RS19455;old_locus_tag=C9E97_19910
NZ_PYKA01000121.1	Protein Homology	CDS	125129	125962	.	+	0	ID=cds-WP_000347310.1;Parent=gene-C9E97_RS19455;Dbxref=GenBank:WP_000347310.1;Name=WP_000347310.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460731.1;locus_tag=C9E97_RS19455;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_000347310.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	125959	126348	.	+	.	ID=gene-C9E97_RS19460;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=C9E97_RS19460;old_locus_tag=C9E97_19915
NZ_PYKA01000121.1	Protein Homology	CDS	125959	126348	.	+	0	ID=cds-WP_135369433.1;Parent=gene-C9E97_RS19460;Dbxref=GenBank:WP_135369433.1;Name=WP_135369433.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460730.1;locus_tag=C9E97_RS19460;product=invasion regulator SirB2;protein_id=WP_135369433.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	126352	127161	.	+	.	ID=gene-C9E97_RS19465;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=C9E97_RS19465;old_locus_tag=C9E97_19920
NZ_PYKA01000121.1	Protein Homology	CDS	126352	127161	.	+	0	ID=cds-WP_001257065.1;Parent=gene-C9E97_RS19465;Dbxref=GenBank:WP_001257065.1;Name=WP_001257065.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460729.1;locus_tag=C9E97_RS19465;product=invasion regulator SirB1;protein_id=WP_001257065.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	127199	128053	.	+	.	ID=gene-C9E97_RS19470;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=C9E97_RS19470;old_locus_tag=C9E97_19925
NZ_PYKA01000121.1	Protein Homology	CDS	127199	128053	.	+	0	ID=cds-WP_000811046.1;Parent=gene-C9E97_RS19470;Dbxref=GenBank:WP_000811046.1;Name=WP_000811046.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460728.1;locus_tag=C9E97_RS19470;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_000811046.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	128107	129207	.	-	.	ID=gene-C9E97_RS19475;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=C9E97_RS19475;old_locus_tag=C9E97_19930
NZ_PYKA01000121.1	Protein Homology	CDS	128107	129207	.	-	0	ID=cds-WP_000148418.1;Parent=gene-C9E97_RS19475;Dbxref=GenBank:WP_000148418.1;Name=WP_000148418.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460727.1;locus_tag=C9E97_RS19475;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_000148418.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	129474	129704	.	+	.	ID=gene-C9E97_RS19480;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=C9E97_RS19480;old_locus_tag=C9E97_19935
NZ_PYKA01000121.1	Protein Homology	CDS	129474	129704	.	+	0	ID=cds-WP_001146392.1;Parent=gene-C9E97_RS19480;Dbxref=GenBank:WP_001146392.1;Name=WP_001146392.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460726.1;locus_tag=C9E97_RS19480;product=putative cation transport regulator ChaB;protein_id=WP_001146392.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	129784	130137	.	-	.	ID=gene-C9E97_RS19485;Name=C9E97_RS19485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19485;old_locus_tag=C9E97_19940
NZ_PYKA01000121.1	Protein Homology	CDS	129784	130137	.	-	0	ID=cds-WP_001179794.1;Parent=gene-C9E97_RS19485;Dbxref=GenBank:WP_001179794.1;Name=WP_001179794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460725.1;locus_tag=C9E97_RS19485;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WP_001179794.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	130314	131738	.	+	.	ID=gene-C9E97_RS19490;Name=C9E97_RS19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19490;old_locus_tag=C9E97_19945
NZ_PYKA01000121.1	Protein Homology	CDS	130314	131738	.	+	0	ID=cds-WP_001116350.1;Parent=gene-C9E97_RS19490;Dbxref=GenBank:WP_001116350.1;Name=WP_001116350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460724.3;locus_tag=C9E97_RS19490;product=YchO/YchP family invasin;protein_id=WP_001116350.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	131739	132389	.	-	.	ID=gene-C9E97_RS19495;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=C9E97_RS19495;old_locus_tag=C9E97_19950
NZ_PYKA01000121.1	Protein Homology	CDS	131739	132389	.	-	0	ID=cds-WP_001064598.1;Parent=gene-C9E97_RS19495;Dbxref=GenBank:WP_001064598.1;Name=WP_001064598.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460723.1;locus_tag=C9E97_RS19495;product=two-component system response regulator NarL;protein_id=WP_001064598.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	132382	134178	.	-	.	ID=gene-C9E97_RS19500;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=C9E97_RS19500;old_locus_tag=C9E97_19955
NZ_PYKA01000121.1	Protein Homology	CDS	132382	134178	.	-	0	ID=cds-WP_000476244.1;Parent=gene-C9E97_RS19500;Dbxref=GenBank:WP_000476244.1;Name=WP_000476244.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460722.1;locus_tag=C9E97_RS19500;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_000476244.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	134519	135916	.	+	.	ID=gene-C9E97_RS19510;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=C9E97_RS19510;old_locus_tag=C9E97_19965
NZ_PYKA01000121.1	Protein Homology	CDS	134519	135916	.	+	0	ID=cds-WP_000019848.1;Parent=gene-C9E97_RS19510;Dbxref=GenBank:WP_000019848.1;Name=WP_000019848.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460721.1;locus_tag=C9E97_RS19510;product=nitrate transporter NarK;protein_id=WP_000019848.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	136304	140047	.	+	.	ID=gene-C9E97_RS19515;Name=C9E97_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19515;old_locus_tag=C9E97_19970
NZ_PYKA01000121.1	Protein Homology	CDS	136304	140047	.	+	0	ID=cds-WP_000032887.1;Parent=gene-C9E97_RS19515;Dbxref=GenBank:WP_000032887.1;Name=WP_000032887.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=C9E97_RS19515;product=nitrate reductase subunit alpha;protein_id=WP_000032887.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	140044	141579	.	+	.	ID=gene-C9E97_RS19520;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=C9E97_RS19520;old_locus_tag=C9E97_19975
NZ_PYKA01000121.1	Protein Homology	CDS	140044	141579	.	+	0	ID=cds-WP_000702629.1;Parent=gene-C9E97_RS19520;Dbxref=GenBank:WP_000702629.1;Name=WP_000702629.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460719.1;locus_tag=C9E97_RS19520;product=nitrate reductase subunit beta;protein_id=WP_000702629.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	141576	142286	.	+	.	ID=gene-C9E97_RS19525;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=C9E97_RS19525;old_locus_tag=C9E97_19980
NZ_PYKA01000121.1	Protein Homology	CDS	141576	142286	.	+	0	ID=cds-WP_000571668.1;Parent=gene-C9E97_RS19525;Dbxref=GenBank:WP_000571668.1;Name=WP_000571668.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460718.1;locus_tag=C9E97_RS19525;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_000571668.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	142286	142963	.	+	.	ID=gene-C9E97_RS19530;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=C9E97_RS19530;old_locus_tag=C9E97_19985
NZ_PYKA01000121.1	Protein Homology	CDS	142286	142963	.	+	0	ID=cds-WP_000545594.1;Parent=gene-C9E97_RS19530;Dbxref=GenBank:WP_000545594.1;Name=WP_000545594.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460717.1;locus_tag=C9E97_RS19530;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000545594.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	143205	144734	.	+	.	ID=gene-C9E97_RS19540;Name=C9E97_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19540;old_locus_tag=C9E97_19995
NZ_PYKA01000121.1	Protein Homology	CDS	143205	144734	.	+	0	ID=cds-WP_135369435.1;Parent=gene-C9E97_RS19540;Dbxref=GenBank:WP_135369435.1;Name=WP_135369435.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460716.1;locus_tag=C9E97_RS19540;product=tetratricopeptide repeat protein;protein_id=WP_135369435.1;transl_table=11
NZ_PYKA01000121.1	RefSeq	gene	144837	144967	.	-	.	ID=gene-C9E97_RS19545;Name=C9E97_RS19545;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E97_RS19545;old_locus_tag=C9E97_20000
NZ_PYKA01000121.1	cmsearch	ncRNA	144837	144967	.	-	.	ID=rna-C9E97_RS19545;Parent=gene-C9E97_RS19545;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS19545;product=RtT sRNA
NZ_PYKA01000121.1	cmsearch	exon	144837	144967	.	-	.	ID=exon-C9E97_RS19545-1;Parent=rna-C9E97_RS19545;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS19545;product=RtT sRNA
NZ_PYKA01000121.1	RefSeq	gene	145018	145134	.	-	.	ID=gene-C9E97_RS19550;Name=C9E97_RS19550;end_range=145134,.;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E97_RS19550;old_locus_tag=C9E97_20005;partial=true
NZ_PYKA01000121.1	cmsearch	ncRNA	145018	145134	.	-	.	ID=rna-C9E97_RS19550;Parent=gene-C9E97_RS19550;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;end_range=145134,.;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS19550;partial=true;product=RtT sRNA
NZ_PYKA01000121.1	cmsearch	exon	145018	145134	.	-	.	ID=exon-C9E97_RS19550-1;Parent=rna-C9E97_RS19550;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;end_range=145134,.;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS19550;partial=true;product=RtT sRNA
##sequence-region NZ_PYKA01000005.1 1 20693
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000005.1	RefSeq	region	1	20693	.	+	.	ID=NZ_PYKA01000005.1:1..20693;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000005.1	RefSeq	gene	88	1221	.	-	.	ID=gene-C9E97_RS00200;Name=C9E97_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00200;old_locus_tag=C9E97_00205
NZ_PYKA01000005.1	Protein Homology	CDS	88	1221	.	-	0	ID=cds-WP_000824901.1;Parent=gene-C9E97_RS00200;Dbxref=GenBank:WP_000824901.1;Name=WP_000824901.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459706.1;locus_tag=C9E97_RS00200;product=glycosyltransferase family 4 protein;protein_id=WP_000824901.1;transl_table=11
NZ_PYKA01000005.1	RefSeq	gene	1234	2130	.	-	.	ID=gene-C9E97_RS00205;Name=C9E97_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00205;old_locus_tag=C9E97_00210
NZ_PYKA01000005.1	Protein Homology	CDS	1234	2130	.	-	0	ID=cds-WP_000973919.1;Parent=gene-C9E97_RS00205;Dbxref=GenBank:WP_000973919.1;Name=WP_000973919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459705.1;locus_tag=C9E97_RS00205;product=glycosyltransferase;protein_id=WP_000973919.1;transl_table=11
NZ_PYKA01000005.1	RefSeq	gene	2127	3278	.	-	.	ID=gene-C9E97_RS00210;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=C9E97_RS00210;old_locus_tag=C9E97_00215
NZ_PYKA01000005.1	Protein Homology	CDS	2127	3278	.	-	0	ID=cds-WP_135369283.1;Parent=gene-C9E97_RS00210;Dbxref=GenBank:WP_135369283.1;Name=WP_135369283.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459704.1;locus_tag=C9E97_RS00210;product=UDP-galactopyranose mutase;protein_id=WP_135369283.1;transl_table=11
NZ_PYKA01000005.1	RefSeq	gene	3564	4304	.	-	.	ID=gene-C9E97_RS00215;Name=C9E97_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00215;old_locus_tag=C9E97_00220
NZ_PYKA01000005.1	Protein Homology	CDS	3564	4304	.	-	0	ID=cds-WP_080110501.1;Parent=gene-C9E97_RS00215;Dbxref=GenBank:WP_080110501.1;Name=WP_080110501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459703.1;locus_tag=C9E97_RS00215;product=transport protein;protein_id=WP_080110501.1;transl_table=11
NZ_PYKA01000005.1	RefSeq	gene	4306	4641	.	-	.	ID=gene-C9E97_RS00220;Name=C9E97_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00220;old_locus_tag=C9E97_00225
NZ_PYKA01000005.1	Protein Homology	CDS	4306	4641	.	-	0	ID=cds-WP_010988980.1;Parent=gene-C9E97_RS00220;Dbxref=GenBank:WP_010988980.1;Name=WP_010988980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459702.1;locus_tag=C9E97_RS00220;product=membrane protein;protein_id=WP_010988980.1;transl_table=11
NZ_PYKA01000005.1	RefSeq	gene	4819	5385	.	-	.	ID=gene-C9E97_RS00225;Name=C9E97_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00225;old_locus_tag=C9E97_00230
NZ_PYKA01000005.1	Protein Homology	CDS	4819	5385	.	-	0	ID=cds-WP_000824704.1;Parent=gene-C9E97_RS00225;Dbxref=GenBank:WP_000824704.1;Name=WP_000824704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459701.1;locus_tag=C9E97_RS00225;product=tyrosine-type DNA invertase;protein_id=WP_000824704.1;transl_table=11
NZ_PYKA01000005.1	RefSeq	gene	5445	5576	.	-	.	ID=gene-C9E97_RS00230;Name=C9E97_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00230;old_locus_tag=C9E97_00235
NZ_PYKA01000005.1	Protein Homology	CDS	5445	5576	.	-	0	ID=cds-WP_001521652.1;Parent=gene-C9E97_RS00230;Dbxref=GenBank:WP_001521652.1;Name=WP_001521652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459700.1;locus_tag=C9E97_RS00230;product=hypothetical protein;protein_id=WP_001521652.1;transl_table=11
NZ_PYKA01000005.1	RefSeq	gene	5900	6634	.	-	.	ID=gene-C9E97_RS00235;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=C9E97_RS00235;old_locus_tag=C9E97_00240
NZ_PYKA01000005.1	Protein Homology	CDS	5900	6634	.	-	0	ID=cds-WP_001017918.1;Parent=gene-C9E97_RS00235;Dbxref=GenBank:WP_001017918.1;Name=WP_001017918.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459699.1;locus_tag=C9E97_RS00235;product=5-oxoprolinase subunit PxpA;protein_id=WP_001017918.1;transl_table=11
NZ_PYKA01000005.1	RefSeq	gene	6624	7556	.	-	.	ID=gene-C9E97_RS00240;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=C9E97_RS00240;old_locus_tag=C9E97_00245
NZ_PYKA01000005.1	Protein Homology	CDS	6624	7556	.	-	0	ID=cds-WP_000932039.1;Parent=gene-C9E97_RS00240;Dbxref=GenBank:WP_000932039.1;Name=WP_000932039.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpC;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459698.1;locus_tag=C9E97_RS00240;product=5-oxoprolinase subunit PxpC;protein_id=WP_000932039.1;transl_table=11
NZ_PYKA01000005.1	RefSeq	gene	7550	8206	.	-	.	ID=gene-C9E97_RS00245;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=C9E97_RS00245;old_locus_tag=C9E97_00250
NZ_PYKA01000005.1	Protein Homology	CDS	7550	8206	.	-	0	ID=cds-WP_001188371.1;Parent=gene-C9E97_RS00245;Dbxref=GenBank:WP_001188371.1;Name=WP_001188371.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459697.1;locus_tag=C9E97_RS00245;product=5-oxoprolinase subunit PxpB;protein_id=WP_001188371.1;transl_table=11
NZ_PYKA01000005.1	RefSeq	gene	8222	8965	.	-	.	ID=gene-C9E97_RS00250;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=C9E97_RS00250;old_locus_tag=C9E97_00255
NZ_PYKA01000005.1	Protein Homology	CDS	8222	8965	.	-	0	ID=cds-WP_000798844.1;Parent=gene-C9E97_RS00250;Dbxref=GenBank:WP_000798844.1;Name=WP_000798844.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=C9E97_RS00250;product=radiation resistance protein YbgI;protein_id=WP_000798844.1;transl_table=11
NZ_PYKA01000005.1	RefSeq	gene	9294	10775	.	+	.	ID=gene-C9E97_RS00255;Name=C9E97_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00255;old_locus_tag=C9E97_00265
NZ_PYKA01000005.1	Protein Homology	CDS	9294	10775	.	+	0	ID=cds-WP_001041123.1;Parent=gene-C9E97_RS00255;Dbxref=GenBank:WP_001041123.1;Name=WP_001041123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459695.1;locus_tag=C9E97_RS00255;product=MFS transporter;protein_id=WP_001041123.1;transl_table=11
NZ_PYKA01000005.1	RefSeq	gene	10814	12235	.	-	.	ID=gene-C9E97_RS00260;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=C9E97_RS00260;old_locus_tag=C9E97_00270
NZ_PYKA01000005.1	Protein Homology	CDS	10814	12235	.	-	0	ID=cds-WP_001142022.1;Parent=gene-C9E97_RS00260;Dbxref=GenBank:WP_001142022.1;Name=WP_001142022.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459694.1;locus_tag=C9E97_RS00260;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_001142022.1;transl_table=11
NZ_PYKA01000005.1	RefSeq	gene	12346	12552	.	-	.	ID=gene-C9E97_RS00265;Name=C9E97_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00265;old_locus_tag=C9E97_00275
NZ_PYKA01000005.1	Protein Homology	CDS	12346	12552	.	-	0	ID=cds-WP_000401433.1;Parent=gene-C9E97_RS00265;Dbxref=GenBank:WP_000401433.1;Name=WP_000401433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459693.1;locus_tag=C9E97_RS00265;product=YbfA family protein;protein_id=WP_000401433.1;transl_table=11
NZ_PYKA01000005.1	RefSeq	gene	12889	12978	.	+	.	ID=gene-C9E97_RS00270;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=C9E97_RS00270;old_locus_tag=C9E97_00280
NZ_PYKA01000005.1	Protein Homology	CDS	12889	12978	.	+	0	ID=cds-WP_001670793.1;Parent=gene-C9E97_RS00270;Dbxref=GenBank:WP_001670793.1;Name=WP_001670793.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=C9E97_RS00270;product=K(+)-transporting ATPase subunit F;protein_id=WP_001670793.1;transl_table=11
NZ_PYKA01000005.1	RefSeq	gene	12978	14657	.	+	.	ID=gene-C9E97_RS00275;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=C9E97_RS00275;old_locus_tag=C9E97_00285
NZ_PYKA01000005.1	Protein Homology	CDS	12978	14657	.	+	0	ID=cds-WP_135369079.1;Parent=gene-C9E97_RS00275;Dbxref=GenBank:WP_135369079.1;Name=WP_135369079.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459691.1;locus_tag=C9E97_RS00275;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_135369079.1;transl_table=11
NZ_PYKA01000005.1	RefSeq	gene	14678	16726	.	+	.	ID=gene-C9E97_RS00280;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=C9E97_RS00280;old_locus_tag=C9E97_00290
NZ_PYKA01000005.1	Protein Homology	CDS	14678	16726	.	+	0	ID=cds-WP_000088026.1;Parent=gene-C9E97_RS00280;Dbxref=GenBank:WP_000088026.1;Name=WP_000088026.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459690.1;locus_tag=C9E97_RS00280;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_000088026.1;transl_table=11
NZ_PYKA01000005.1	RefSeq	gene	16735	17319	.	+	.	ID=gene-C9E97_RS00285;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=C9E97_RS00285;old_locus_tag=C9E97_00295
NZ_PYKA01000005.1	Protein Homology	CDS	16735	17319	.	+	0	ID=cds-WP_000579804.1;Parent=gene-C9E97_RS00285;Dbxref=GenBank:WP_000579804.1;Name=WP_000579804.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459689.1;locus_tag=C9E97_RS00285;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_000579804.1;transl_table=11
NZ_PYKA01000005.1	RefSeq	gene	17316	20000	.	+	.	ID=gene-C9E97_RS00290;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=C9E97_RS00290;old_locus_tag=C9E97_00300
NZ_PYKA01000005.1	Protein Homology	CDS	17316	20000	.	+	0	ID=cds-WP_135419935.1;Parent=gene-C9E97_RS00290;Dbxref=GenBank:WP_135419935.1;Name=WP_135419935.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459688.1;locus_tag=C9E97_RS00290;product=two-component system sensor histidine kinase KdpD;protein_id=WP_135419935.1;transl_table=11
NZ_PYKA01000005.1	RefSeq	gene	19997	20674	.	+	.	ID=gene-C9E97_RS00295;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=C9E97_RS00295;old_locus_tag=C9E97_00305
NZ_PYKA01000005.1	Protein Homology	CDS	19997	20674	.	+	0	ID=cds-WP_000186059.1;Parent=gene-C9E97_RS00295;Dbxref=GenBank:WP_000186059.1;Name=WP_000186059.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459687.1;locus_tag=C9E97_RS00295;product=two-component system response regulator KdpE;protein_id=WP_000186059.1;transl_table=11
##sequence-region NZ_PYKA01000030.1 1 20410
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000030.1	RefSeq	region	1	20410	.	+	.	ID=NZ_PYKA01000030.1:1..20410;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000030.1	RefSeq	gene	1	703	.	-	.	ID=gene-C9E97_RS03665;Name=C9E97_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03665;old_locus_tag=C9E97_03775;partial=true;start_range=.,1
NZ_PYKA01000030.1	Protein Homology	CDS	1	703	.	-	0	ID=cds-WP_210115371.1;Parent=gene-C9E97_RS03665;Dbxref=GenBank:WP_210115371.1;Name=WP_210115371.1;Ontology_term=GO:0098024;gbkey=CDS;go_component=virus tail%2C fiber|0098024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463065.1;locus_tag=C9E97_RS03665;partial=true;product=phage tail protein;protein_id=WP_210115371.1;start_range=.,1;transl_table=11
NZ_PYKA01000030.1	RefSeq	gene	706	1338	.	-	.	ID=gene-C9E97_RS03670;Name=C9E97_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03670;old_locus_tag=C9E97_03780
NZ_PYKA01000030.1	Protein Homology	CDS	706	1338	.	-	0	ID=cds-WP_000359503.1;Parent=gene-C9E97_RS03670;Dbxref=GenBank:WP_000359503.1;Name=WP_000359503.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463066.1;locus_tag=C9E97_RS03670;product=phage tail protein I;protein_id=WP_000359503.1;transl_table=11
NZ_PYKA01000030.1	RefSeq	gene	1331	2446	.	-	.	ID=gene-C9E97_RS03675;Name=C9E97_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03675;old_locus_tag=C9E97_03785
NZ_PYKA01000030.1	Protein Homology	CDS	1331	2446	.	-	0	ID=cds-WP_135369172.1;Parent=gene-C9E97_RS03675;Dbxref=GenBank:WP_135369172.1;Name=WP_135369172.1;Ontology_term=GO:0098045,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_process=virus baseplate assembly|0098045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463067.1;locus_tag=C9E97_RS03675;product=baseplate assembly protein;protein_id=WP_135369172.1;transl_table=11
NZ_PYKA01000030.1	RefSeq	gene	2437	2796	.	-	.	ID=gene-C9E97_RS03680;Name=C9E97_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03680;old_locus_tag=C9E97_03790
NZ_PYKA01000030.1	Protein Homology	CDS	2437	2796	.	-	0	ID=cds-WP_001093501.1;Parent=gene-C9E97_RS03680;Dbxref=GenBank:WP_001093501.1;Name=WP_001093501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463068.1;locus_tag=C9E97_RS03680;product=GPW/gp25 family protein;protein_id=WP_001093501.1;transl_table=11
NZ_PYKA01000030.1	RefSeq	gene	2960	4507	.	-	.	ID=gene-C9E97_RS03685;Name=C9E97_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03685;old_locus_tag=C9E97_03795
NZ_PYKA01000030.1	Protein Homology	CDS	2960	4507	.	-	0	ID=cds-WP_079971588.1;Parent=gene-C9E97_RS03685;Dbxref=GenBank:WP_079971588.1;Name=WP_079971588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463069.1;locus_tag=C9E97_RS03685;product=DUF6056 family protein;protein_id=WP_079971588.1;transl_table=11
NZ_PYKA01000030.1	RefSeq	gene	4507	5436	.	-	.	ID=gene-C9E97_RS03690;Name=C9E97_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03690;old_locus_tag=C9E97_03800
NZ_PYKA01000030.1	Protein Homology	CDS	4507	5436	.	-	0	ID=cds-WP_023137582.1;Parent=gene-C9E97_RS03690;Dbxref=GenBank:WP_023137582.1;Name=WP_023137582.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463070.1;locus_tag=C9E97_RS03690;product=glycosyltransferase family 2 protein;protein_id=WP_023137582.1;transl_table=11
NZ_PYKA01000030.1	RefSeq	gene	5433	5795	.	-	.	ID=gene-C9E97_RS03695;Name=C9E97_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03695;old_locus_tag=C9E97_03805
NZ_PYKA01000030.1	Protein Homology	CDS	5433	5795	.	-	0	ID=cds-WP_000593184.1;Parent=gene-C9E97_RS03695;Dbxref=GenBank:WP_000593184.1;Name=WP_000593184.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463071.1;locus_tag=C9E97_RS03695;product=GtrA family protein;protein_id=WP_000593184.1;transl_table=11
NZ_PYKA01000030.1	RefSeq	gene	6119	6841	.	-	.	ID=gene-C9E97_RS03705;Name=C9E97_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03705;old_locus_tag=C9E97_03815
NZ_PYKA01000030.1	Protein Homology	CDS	6119	6841	.	-	0	ID=cds-WP_135369171.1;Parent=gene-C9E97_RS03705;Dbxref=GenBank:WP_135369171.1;Name=WP_135369171.1;Ontology_term=GO:0098003,GO:0046872,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_function=metal ion binding|0046872||IEA;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463072.1;locus_tag=C9E97_RS03705;product=phage baseplate assembly protein V;protein_id=WP_135369171.1;transl_table=11
NZ_PYKA01000030.1	RefSeq	gene	6851	7894	.	-	.	ID=gene-C9E97_RS03710;Name=C9E97_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03710;old_locus_tag=C9E97_03820
NZ_PYKA01000030.1	Protein Homology	CDS	6851	7894	.	-	0	ID=cds-WP_135369170.1;Parent=gene-C9E97_RS03710;Dbxref=GenBank:WP_135369170.1;Name=WP_135369170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463073.1;locus_tag=C9E97_RS03710;product=phage late control D family protein;protein_id=WP_135369170.1;transl_table=11
NZ_PYKA01000030.1	RefSeq	gene	7882	8091	.	-	.	ID=gene-C9E97_RS03715;Name=C9E97_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03715;old_locus_tag=C9E97_03825
NZ_PYKA01000030.1	Protein Homology	CDS	7882	8091	.	-	0	ID=cds-WP_001269716.1;Parent=gene-C9E97_RS03715;Dbxref=GenBank:WP_001269716.1;Name=WP_001269716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463074.1;locus_tag=C9E97_RS03715;product=tail protein X;protein_id=WP_001269716.1;transl_table=11
NZ_PYKA01000030.1	RefSeq	gene	8091	9044	.	-	.	ID=gene-C9E97_RS03720;Name=C9E97_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03720;old_locus_tag=C9E97_03830
NZ_PYKA01000030.1	Protein Homology	CDS	8091	9044	.	-	0	ID=cds-WP_135369169.1;Parent=gene-C9E97_RS03720;Dbxref=GenBank:WP_135369169.1;Name=WP_135369169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463075.1;locus_tag=C9E97_RS03720;product=phage tail protein;protein_id=WP_135369169.1;transl_table=11
NZ_PYKA01000030.1	RefSeq	gene	9044	11395	.	-	.	ID=gene-C9E97_RS03725;Name=C9E97_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03725;old_locus_tag=C9E97_03835
NZ_PYKA01000030.1	Protein Homology	CDS	9044	11395	.	-	0	ID=cds-WP_135369168.1;Parent=gene-C9E97_RS03725;Dbxref=GenBank:WP_135369168.1;Name=WP_135369168.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463076.1;locus_tag=C9E97_RS03725;product=phage tail tape measure protein;protein_id=WP_135369168.1;transl_table=11
NZ_PYKA01000030.1	RefSeq	gene	11492	11620	.	-	.	ID=gene-C9E97_RS23960;Name=C9E97_RS23960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23960;old_locus_tag=C9E97_03840
NZ_PYKA01000030.1	Protein Homology	CDS	11492	11620	.	-	0	ID=cds-WP_001185655.1;Parent=gene-C9E97_RS23960;Dbxref=GenBank:WP_001185655.1;Name=WP_001185655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728452.1;locus_tag=C9E97_RS23960;product=GpE family phage tail protein;protein_id=WP_001185655.1;transl_table=11
NZ_PYKA01000030.1	RefSeq	gene	11580	11897	.	-	.	ID=gene-C9E97_RS03735;Name=C9E97_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03735;old_locus_tag=C9E97_03845
NZ_PYKA01000030.1	Protein Homology	CDS	11580	11897	.	-	0	ID=cds-WP_001003642.1;Parent=gene-C9E97_RS03735;Dbxref=GenBank:WP_001003642.1;Name=WP_001003642.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001003637.1;locus_tag=C9E97_RS03735;product=phage tail assembly protein;protein_id=WP_001003642.1;transl_table=11
NZ_PYKA01000030.1	RefSeq	gene	11949	12473	.	-	.	ID=gene-C9E97_RS03740;Name=C9E97_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03740;old_locus_tag=C9E97_03850
NZ_PYKA01000030.1	Protein Homology	CDS	11949	12473	.	-	0	ID=cds-WP_086811333.1;Parent=gene-C9E97_RS03740;Dbxref=GenBank:WP_086811333.1;Name=WP_086811333.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463077.1;locus_tag=C9E97_RS03740;product=phage major tail tube protein;protein_id=WP_086811333.1;transl_table=11
NZ_PYKA01000030.1	RefSeq	gene	12473	13897	.	-	.	ID=gene-C9E97_RS03745;Name=C9E97_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03745;old_locus_tag=C9E97_03855
NZ_PYKA01000030.1	Protein Homology	CDS	12473	13897	.	-	0	ID=cds-WP_000729842.1;Parent=gene-C9E97_RS03745;Dbxref=GenBank:WP_000729842.1;Name=WP_000729842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729842.1;locus_tag=C9E97_RS03745;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_000729842.1;transl_table=11
NZ_PYKA01000030.1	RefSeq	gene	13887	14084	.	-	.	ID=gene-C9E97_RS03750;Name=C9E97_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03750;old_locus_tag=C9E97_03860
NZ_PYKA01000030.1	Protein Homology	CDS	13887	14084	.	-	0	ID=cds-WP_000875314.1;Parent=gene-C9E97_RS03750;Dbxref=GenBank:WP_000875314.1;Name=WP_000875314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463079.1;locus_tag=C9E97_RS03750;product=hypothetical protein;protein_id=WP_000875314.1;transl_table=11
NZ_PYKA01000030.1	RefSeq	gene	14081	14536	.	-	.	ID=gene-C9E97_RS03755;Name=C9E97_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03755;old_locus_tag=C9E97_03865
NZ_PYKA01000030.1	Protein Homology	CDS	14081	14536	.	-	0	ID=cds-WP_000449434.1;Parent=gene-C9E97_RS03755;Dbxref=GenBank:WP_000449434.1;Name=WP_000449434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463080.1;locus_tag=C9E97_RS03755;product=Gp37 family protein;protein_id=WP_000449434.1;transl_table=11
NZ_PYKA01000030.1	RefSeq	gene	14696	15010	.	-	.	ID=gene-C9E97_RS03760;Name=C9E97_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03760;old_locus_tag=C9E97_03870
NZ_PYKA01000030.1	Protein Homology	CDS	14696	15010	.	-	0	ID=cds-WP_000777267.1;Parent=gene-C9E97_RS03760;Dbxref=GenBank:WP_000777267.1;Name=WP_000777267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463081.1;locus_tag=C9E97_RS03760;product=hypothetical protein;protein_id=WP_000777267.1;transl_table=11
NZ_PYKA01000030.1	RefSeq	gene	15023	15628	.	-	.	ID=gene-C9E97_RS03765;Name=C9E97_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03765;old_locus_tag=C9E97_03875
NZ_PYKA01000030.1	Protein Homology	CDS	15023	15628	.	-	0	ID=cds-WP_135369167.1;Parent=gene-C9E97_RS03765;Dbxref=GenBank:WP_135369167.1;Name=WP_135369167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463082.1;locus_tag=C9E97_RS03765;product=lytic transglycosylase domain-containing protein;protein_id=WP_135369167.1;transl_table=11
NZ_PYKA01000030.1	RefSeq	gene	15631	15918	.	-	.	ID=gene-C9E97_RS03770;Name=C9E97_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03770;old_locus_tag=C9E97_03880
NZ_PYKA01000030.1	Protein Homology	CDS	15631	15918	.	-	0	ID=cds-WP_001226439.1;Parent=gene-C9E97_RS03770;Dbxref=GenBank:WP_001226439.1;Name=WP_001226439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463083.1;locus_tag=C9E97_RS03770;product=putative holin;protein_id=WP_001226439.1;transl_table=11
NZ_PYKA01000030.1	RefSeq	gene	16495	16842	.	+	.	ID=gene-C9E97_RS03775;Name=C9E97_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03775;old_locus_tag=C9E97_03885
NZ_PYKA01000030.1	Protein Homology	CDS	16495	16842	.	+	0	ID=cds-WP_000615248.1;Parent=gene-C9E97_RS03775;Dbxref=GenBank:WP_000615248.1;Name=WP_000615248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615246.1;locus_tag=C9E97_RS03775;product=Mor transcription activator family protein;protein_id=WP_000615248.1;transl_table=11
NZ_PYKA01000030.1	RefSeq	gene	16973	18322	.	-	.	ID=gene-C9E97_RS03780;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=C9E97_RS03780;old_locus_tag=C9E97_03890
NZ_PYKA01000030.1	Protein Homology	CDS	16973	18322	.	-	0	ID=cds-WP_000136394.1;Parent=gene-C9E97_RS03780;Dbxref=GenBank:WP_000136394.1;Name=WP_000136394.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463085.1;locus_tag=C9E97_RS03780;product=lysine-sensitive aspartokinase 3;protein_id=WP_000136394.1;transl_table=11
NZ_PYKA01000030.1	RefSeq	gene	18667	20316	.	+	.	ID=gene-C9E97_RS03785;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=C9E97_RS03785;old_locus_tag=C9E97_03895
NZ_PYKA01000030.1	Protein Homology	CDS	18667	20316	.	+	0	ID=cds-WP_000790028.1;Parent=gene-C9E97_RS03785;Dbxref=GenBank:WP_000790028.1;Name=WP_000790028.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463086.1;locus_tag=C9E97_RS03785;product=glucose-6-phosphate isomerase;protein_id=WP_000790028.1;transl_table=11
##sequence-region NZ_PYKA01000127.1 1 19488
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000127.1	RefSeq	region	1	19488	.	+	.	ID=NZ_PYKA01000127.1:1..19488;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000127.1	RefSeq	pseudogene	1	115	.	-	.	ID=gene-C9E97_RS20700;Name=C9E97_RS20700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS20700;old_locus_tag=C9E97_21175;partial=true;pseudo=true;start_range=.,1
NZ_PYKA01000127.1	Protein Homology	CDS	1	115	.	-	0	ID=cds-C9E97_RS20700;Parent=gene-C9E97_RS20700;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=C9E97_RS20700;partial=true;product=GntR family transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKA01000127.1	RefSeq	gene	165	1490	.	+	.	ID=gene-C9E97_RS20705;Name=C9E97_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20705;old_locus_tag=C9E97_21180
NZ_PYKA01000127.1	Protein Homology	CDS	165	1490	.	+	0	ID=cds-WP_000098078.1;Parent=gene-C9E97_RS20705;Dbxref=GenBank:WP_000098078.1;Name=WP_000098078.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=C9E97_RS20705;product=MFS transporter;protein_id=WP_000098078.1;transl_table=11
NZ_PYKA01000127.1	RefSeq	gene	1505	2707	.	+	.	ID=gene-C9E97_RS20710;Name=C9E97_RS20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20710;old_locus_tag=C9E97_21185
NZ_PYKA01000127.1	Protein Homology	CDS	1505	2707	.	+	0	ID=cds-WP_135369376.1;Parent=gene-C9E97_RS20710;Dbxref=GenBank:WP_135369376.1;Name=WP_135369376.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461215.1;locus_tag=C9E97_RS20710;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_135369376.1;transl_table=11
NZ_PYKA01000127.1	RefSeq	gene	3117	5753	.	+	.	ID=gene-C9E97_RS20715;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=C9E97_RS20715;old_locus_tag=C9E97_21195
NZ_PYKA01000127.1	Protein Homology	CDS	3117	5753	.	+	0	ID=cds-WP_001281271.1;Parent=gene-C9E97_RS20715;Dbxref=GenBank:WP_001281271.1;Name=WP_001281271.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=C9E97_RS20715;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_001281271.1;transl_table=11
NZ_PYKA01000127.1	RefSeq	gene	5871	8717	.	+	.	ID=gene-C9E97_RS20720;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=C9E97_RS20720;old_locus_tag=C9E97_21200
NZ_PYKA01000127.1	Protein Homology	CDS	5871	8717	.	+	0	ID=cds-WP_000876075.1;Parent=gene-C9E97_RS20720;Dbxref=GenBank:WP_000876075.1;Name=WP_000876075.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461213.1;locus_tag=C9E97_RS20720;product=two-component system sensor histidine kinase RcsC;protein_id=WP_000876075.1;transl_table=11
NZ_PYKA01000127.1	RefSeq	gene	8820	9470	.	-	.	ID=gene-C9E97_RS20725;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=C9E97_RS20725;old_locus_tag=C9E97_21205
NZ_PYKA01000127.1	Protein Homology	CDS	8820	9470	.	-	0	ID=cds-WP_001061919.1;Parent=gene-C9E97_RS20725;Dbxref=GenBank:WP_001061919.1;Name=WP_001061919.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461212.1;locus_tag=C9E97_RS20725;product=response regulator transcription factor RcsB;protein_id=WP_001061919.1;transl_table=11
NZ_PYKA01000127.1	RefSeq	gene	9487	12156	.	-	.	ID=gene-C9E97_RS20730;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=C9E97_RS20730;old_locus_tag=C9E97_21210
NZ_PYKA01000127.1	Protein Homology	CDS	9487	12156	.	-	0	ID=cds-WP_135369377.1;Parent=gene-C9E97_RS20730;Dbxref=GenBank:WP_135369377.1;Name=WP_135369377.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=C9E97_RS20730;product=phosphotransferase RcsD;protein_id=WP_135369377.1;transl_table=11
NZ_PYKA01000127.1	RefSeq	gene	12885	14021	.	+	.	ID=gene-C9E97_RS20735;Name=C9E97_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20735;old_locus_tag=C9E97_21220
NZ_PYKA01000127.1	Protein Homology	CDS	12885	14021	.	+	0	ID=cds-WP_000865521.1;Parent=gene-C9E97_RS20735;Dbxref=GenBank:WP_000865521.1;Name=WP_000865521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461210.1;locus_tag=C9E97_RS20735;product=porin OmpC;protein_id=WP_000865521.1;transl_table=11
NZ_PYKA01000127.1	RefSeq	gene	14136	15188	.	+	.	ID=gene-C9E97_RS20740;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=C9E97_RS20740;old_locus_tag=C9E97_21225
NZ_PYKA01000127.1	Protein Homology	CDS	14136	15188	.	+	0	ID=cds-WP_000784304.1;Parent=gene-C9E97_RS20740;Dbxref=GenBank:WP_000784304.1;Name=WP_000784304.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461209.1;locus_tag=C9E97_RS20740;product=FAD:protein FMN transferase ApbE;protein_id=WP_000784304.1;transl_table=11
NZ_PYKA01000127.1	RefSeq	gene	15269	16330	.	+	.	ID=gene-C9E97_RS20745;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=C9E97_RS20745;old_locus_tag=C9E97_21230
NZ_PYKA01000127.1	Protein Homology	CDS	15269	16330	.	+	0	ID=cds-WP_047605511.1;Parent=gene-C9E97_RS20745;Dbxref=GenBank:WP_047605511.1;Name=WP_047605511.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461208.1;locus_tag=C9E97_RS20745;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_047605511.1;transl_table=11
NZ_PYKA01000127.1	RefSeq	gene	16333	16983	.	+	.	ID=gene-C9E97_RS20750;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=C9E97_RS20750;old_locus_tag=C9E97_21235
NZ_PYKA01000127.1	Protein Homology	CDS	16333	16983	.	+	0	ID=cds-WP_000884991.1;Parent=gene-C9E97_RS20750;Dbxref=GenBank:WP_000884991.1;Name=WP_000884991.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461207.1;locus_tag=C9E97_RS20750;product=DNA oxidative demethylase AlkB;protein_id=WP_000884991.1;transl_table=11
NZ_PYKA01000127.1	RefSeq	gene	17059	18702	.	+	.	ID=gene-C9E97_RS20755;Name=C9E97_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS20755;old_locus_tag=C9E97_21240
NZ_PYKA01000127.1	Protein Homology	CDS	17059	18702	.	+	0	ID=cds-WP_135369554.1;Parent=gene-C9E97_RS20755;Dbxref=GenBank:WP_135369554.1;Name=WP_135369554.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461206.1;locus_tag=C9E97_RS20755;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_135369554.1;transl_table=11
NZ_PYKA01000127.1	RefSeq	gene	18902	19396	.	-	.	ID=gene-C9E97_RS20760;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=C9E97_RS20760;old_locus_tag=C9E97_21245
NZ_PYKA01000127.1	Protein Homology	CDS	18902	19396	.	-	0	ID=cds-WP_135369555.1;Parent=gene-C9E97_RS20760;Dbxref=GenBank:WP_135369555.1;Name=WP_135369555.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461205.1;locus_tag=C9E97_RS20760;product=serine protease inhibitor ecotin;protein_id=WP_135369555.1;transl_table=11
##sequence-region NZ_PYKA01000081.1 1 18623
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000081.1	RefSeq	region	1	18623	.	+	.	ID=NZ_PYKA01000081.1:1..18623;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000081.1	RefSeq	pseudogene	1	123	.	+	.	ID=gene-C9E97_RS23775;Name=C9E97_RS23775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23775;partial=true;pseudo=true;start_range=.,1
NZ_PYKA01000081.1	Protein Homology	CDS	1	123	.	+	0	ID=cds-C9E97_RS23775;Parent=gene-C9E97_RS23775;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001110920.1;locus_tag=C9E97_RS23775;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKA01000081.1	RefSeq	gene	125	469	.	-	.	ID=gene-C9E97_RS11375;Name=C9E97_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11375;old_locus_tag=C9E97_11640
NZ_PYKA01000081.1	Protein Homology	CDS	125	469	.	-	0	ID=cds-WP_135420100.1;Parent=gene-C9E97_RS11375;Dbxref=GenBank:WP_135420100.1;Name=WP_135420100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463025.1;locus_tag=C9E97_RS11375;product=cytoplasmic protein;protein_id=WP_135420100.1;transl_table=11
NZ_PYKA01000081.1	RefSeq	pseudogene	880	1064	.	+	.	ID=gene-C9E97_RS11380;Name=C9E97_RS11380;end_range=1064,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS11380;old_locus_tag=C9E97_11645;partial=true;pseudo=true
NZ_PYKA01000081.1	Protein Homology	CDS	880	1064	.	+	0	ID=cds-C9E97_RS11380;Parent=gene-C9E97_RS11380;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1064,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463027.1;locus_tag=C9E97_RS11380;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PYKA01000081.1	RefSeq	gene	1218	2351	.	-	.	ID=gene-C9E97_RS11385;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=C9E97_RS11385;old_locus_tag=C9E97_11650
NZ_PYKA01000081.1	Protein Homology	CDS	1218	2351	.	-	0	ID=cds-WP_135369424.1;Parent=gene-C9E97_RS11385;Dbxref=GenBank:WP_135369424.1;Name=WP_135369424.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463028.1;locus_tag=C9E97_RS11385;product=2-iminoacetate synthase ThiH;protein_id=WP_135369424.1;transl_table=11
NZ_PYKA01000081.1	RefSeq	gene	2348	3118	.	-	.	ID=gene-C9E97_RS11390;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=C9E97_RS11390;old_locus_tag=C9E97_11655
NZ_PYKA01000081.1	Protein Homology	CDS	2348	3118	.	-	0	ID=cds-WP_052932743.1;Parent=gene-C9E97_RS11390;Dbxref=GenBank:WP_052932743.1;Name=WP_052932743.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463029.1;locus_tag=C9E97_RS11390;product=thiazole synthase;protein_id=WP_052932743.1;transl_table=11
NZ_PYKA01000081.1	RefSeq	gene	3120	3320	.	-	.	ID=gene-C9E97_RS11395;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=C9E97_RS11395;old_locus_tag=C9E97_11660
NZ_PYKA01000081.1	Protein Homology	CDS	3120	3320	.	-	0	ID=cds-WP_001166842.1;Parent=gene-C9E97_RS11395;Dbxref=GenBank:WP_001166842.1;Name=WP_001166842.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463030.1;locus_tag=C9E97_RS11395;product=sulfur carrier protein ThiS;protein_id=WP_001166842.1;transl_table=11
NZ_PYKA01000081.1	RefSeq	gene	3301	4059	.	-	.	ID=gene-C9E97_RS11400;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=C9E97_RS11400;old_locus_tag=C9E97_11665
NZ_PYKA01000081.1	Protein Homology	CDS	3301	4059	.	-	0	ID=cds-WP_135369425.1;Parent=gene-C9E97_RS11400;Dbxref=GenBank:WP_135369425.1;Name=WP_135369425.1;Ontology_term=GO:0009228,GO:0016779;gbkey=CDS;gene=thiF;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463031.1;locus_tag=C9E97_RS11400;product=thiazole biosynthesis adenylyltransferase ThiF;protein_id=WP_135369425.1;transl_table=11
NZ_PYKA01000081.1	RefSeq	gene	4052	4687	.	-	.	ID=gene-C9E97_RS11405;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=C9E97_RS11405;old_locus_tag=C9E97_11670
NZ_PYKA01000081.1	Protein Homology	CDS	4052	4687	.	-	0	ID=cds-WP_135369426.1;Parent=gene-C9E97_RS11405;Dbxref=GenBank:WP_135369426.1;Name=WP_135369426.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463032.1;locus_tag=C9E97_RS11405;product=thiamine phosphate synthase;protein_id=WP_135369426.1;transl_table=11
NZ_PYKA01000081.1	RefSeq	gene	4687	6582	.	-	.	ID=gene-C9E97_RS11410;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=C9E97_RS11410;old_locus_tag=C9E97_11675
NZ_PYKA01000081.1	Protein Homology	CDS	4687	6582	.	-	0	ID=cds-WP_135369427.1;Parent=gene-C9E97_RS11410;Dbxref=GenBank:WP_135369427.1;Name=WP_135369427.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541272.1;locus_tag=C9E97_RS11410;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_135369427.1;transl_table=11
NZ_PYKA01000081.1	RefSeq	gene	6947	7435	.	-	.	ID=gene-C9E97_RS11415;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=C9E97_RS11415;old_locus_tag=C9E97_11680
NZ_PYKA01000081.1	Protein Homology	CDS	6947	7435	.	-	0	ID=cds-WP_000934315.1;Parent=gene-C9E97_RS11415;Dbxref=GenBank:WP_000934315.1;Name=WP_000934315.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463034.1;locus_tag=C9E97_RS11415;product=sigma D regulator;protein_id=WP_000934315.1;transl_table=11
NZ_PYKA01000081.1	RefSeq	gene	7528	8301	.	+	.	ID=gene-C9E97_RS11420;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=C9E97_RS11420;old_locus_tag=C9E97_11685
NZ_PYKA01000081.1	Protein Homology	CDS	7528	8301	.	+	0	ID=cds-WP_135369428.1;Parent=gene-C9E97_RS11420;Dbxref=GenBank:WP_135369428.1;Name=WP_135369428.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463035.1;locus_tag=C9E97_RS11420;product=NAD(+) diphosphatase;protein_id=WP_135369428.1;transl_table=11
NZ_PYKA01000081.1	RefSeq	gene	8342	9406	.	+	.	ID=gene-C9E97_RS11425;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=C9E97_RS11425;old_locus_tag=C9E97_11690
NZ_PYKA01000081.1	Protein Homology	CDS	8342	9406	.	+	0	ID=cds-WP_135369429.1;Parent=gene-C9E97_RS11425;Dbxref=GenBank:WP_135369429.1;Name=WP_135369429.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463036.2;locus_tag=C9E97_RS11425;product=uroporphyrinogen decarboxylase;protein_id=WP_135369429.1;transl_table=11
NZ_PYKA01000081.1	RefSeq	gene	9416	10087	.	+	.	ID=gene-C9E97_RS11430;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=C9E97_RS11430;old_locus_tag=C9E97_11695
NZ_PYKA01000081.1	Protein Homology	CDS	9416	10087	.	+	0	ID=cds-WP_000362363.1;Parent=gene-C9E97_RS11430;Dbxref=GenBank:WP_000362363.1;Name=WP_000362363.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463037.1;locus_tag=C9E97_RS11430;product=deoxyribonuclease V;protein_id=WP_000362363.1;transl_table=11
NZ_PYKA01000081.1	RefSeq	gene	10129	10719	.	+	.	ID=gene-C9E97_RS11435;Name=C9E97_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11435;old_locus_tag=C9E97_11700
NZ_PYKA01000081.1	Protein Homology	CDS	10129	10719	.	+	0	ID=cds-WP_000940092.1;Parent=gene-C9E97_RS11435;Dbxref=GenBank:WP_000940092.1;Name=WP_000940092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463038.1;locus_tag=C9E97_RS11435;product=YjaG family protein;protein_id=WP_000940092.1;transl_table=11
NZ_PYKA01000081.1	RefSeq	gene	10906	11178	.	+	.	ID=gene-C9E97_RS11440;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=C9E97_RS11440;old_locus_tag=C9E97_11705
NZ_PYKA01000081.1	Protein Homology	CDS	10906	11178	.	+	0	ID=cds-WP_001044509.1;Parent=gene-C9E97_RS11440;Dbxref=GenBank:WP_001044509.1;Name=WP_001044509.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=C9E97_RS11440;product=nucleoid-associated protein HU-alpha;protein_id=WP_001044509.1;transl_table=11
NZ_PYKA01000081.1	RefSeq	gene	11190	11882	.	+	.	ID=gene-C9E97_RS11445;Name=C9E97_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS11445;old_locus_tag=C9E97_11710
NZ_PYKA01000081.1	Protein Homology	CDS	11190	11882	.	+	0	ID=cds-WP_001083940.1;Parent=gene-C9E97_RS11445;Dbxref=GenBank:WP_001083940.1;Name=WP_001083940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463040.1;locus_tag=C9E97_RS11445;product=DUF1481 domain-containing protein;protein_id=WP_001083940.1;transl_table=11
NZ_PYKA01000081.1	RefSeq	gene	11924	12379	.	-	.	ID=gene-C9E97_RS11450;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=C9E97_RS11450;old_locus_tag=C9E97_11715
NZ_PYKA01000081.1	Protein Homology	CDS	11924	12379	.	-	0	ID=cds-WP_135369430.1;Parent=gene-C9E97_RS11450;Dbxref=GenBank:WP_135369430.1;Name=WP_135369430.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463041.1;locus_tag=C9E97_RS11450;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_135369430.1;transl_table=11
NZ_PYKA01000081.1	RefSeq	gene	12633	14030	.	+	.	ID=gene-C9E97_RS11455;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=C9E97_RS11455;old_locus_tag=C9E97_11720
NZ_PYKA01000081.1	Protein Homology	CDS	12633	14030	.	+	0	ID=cds-WP_001621492.1;Parent=gene-C9E97_RS11455;Dbxref=GenBank:WP_001621492.1;Name=WP_001621492.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463042.1;locus_tag=C9E97_RS11455;product=two-component system sensor histidine kinase ZraS;protein_id=WP_001621492.1;transl_table=11
NZ_PYKA01000081.1	RefSeq	gene	14036	15361	.	+	.	ID=gene-C9E97_RS11460;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=C9E97_RS11460;old_locus_tag=C9E97_11725
NZ_PYKA01000081.1	Protein Homology	CDS	14036	15361	.	+	0	ID=cds-WP_135369431.1;Parent=gene-C9E97_RS11460;Dbxref=GenBank:WP_135369431.1;Name=WP_135369431.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463043.1;locus_tag=C9E97_RS11460;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_135369431.1;transl_table=11
NZ_PYKA01000081.1	RefSeq	gene	15358	16647	.	-	.	ID=gene-C9E97_RS11465;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=C9E97_RS11465;old_locus_tag=C9E97_11730
NZ_PYKA01000081.1	Protein Homology	CDS	15358	16647	.	-	0	ID=cds-WP_079950073.1;Parent=gene-C9E97_RS11465;Dbxref=GenBank:WP_079950073.1;Name=WP_079950073.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463044.1;locus_tag=C9E97_RS11465;product=phosphoribosylamine--glycine ligase;protein_id=WP_079950073.1;transl_table=11
NZ_PYKA01000081.1	RefSeq	gene	16659	18248	.	-	.	ID=gene-C9E97_RS11470;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=C9E97_RS11470;old_locus_tag=C9E97_11735
NZ_PYKA01000081.1	Protein Homology	CDS	16659	18248	.	-	0	ID=cds-WP_135369432.1;Parent=gene-C9E97_RS11470;Dbxref=GenBank:WP_135369432.1;Name=WP_135369432.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=C9E97_RS11470;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_135369432.1;transl_table=11
##sequence-region NZ_PYKA01000091.1 1 16543
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000091.1	RefSeq	region	1	16543	.	+	.	ID=NZ_PYKA01000091.1:1..16543;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000091.1	RefSeq	pseudogene	1	251	.	+	.	ID=gene-C9E97_RS12160;Name=C9E97_RS12160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS12160;old_locus_tag=C9E97_12445;partial=true;pseudo=true;start_range=.,1
NZ_PYKA01000091.1	Protein Homology	CDS	1	251	.	+	2	ID=cds-C9E97_RS12160;Parent=gene-C9E97_RS12160;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461178.1;locus_tag=C9E97_RS12160;partial=true;product=phage tail protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKA01000091.1	RefSeq	gene	254	781	.	+	.	ID=gene-C9E97_RS12165;Name=C9E97_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12165;old_locus_tag=C9E97_12450
NZ_PYKA01000091.1	Protein Homology	CDS	254	781	.	+	0	ID=cds-WP_000680167.1;Parent=gene-C9E97_RS12165;Dbxref=GenBank:WP_000680167.1;Name=WP_000680167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461177.1;locus_tag=C9E97_RS12165;product=tail fiber assembly protein;protein_id=WP_000680167.1;transl_table=11
NZ_PYKA01000091.1	RefSeq	gene	912	2084	.	+	.	ID=gene-C9E97_RS12170;Name=C9E97_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12170;old_locus_tag=C9E97_12455
NZ_PYKA01000091.1	Protein Homology	CDS	912	2084	.	+	0	ID=cds-WP_094914708.1;Parent=gene-C9E97_RS12170;Dbxref=GenBank:WP_094914708.1;Name=WP_094914708.1;Ontology_term=GO:0099000,GO:0098027;gbkey=CDS;go_component=virus tail%2C sheath|0098027||IEA;go_process=symbiont genome ejection through host cell envelope%2C contractile tail mechanism|0099000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461629.1;locus_tag=C9E97_RS12170;product=phage tail sheath protein;protein_id=WP_094914708.1;transl_table=11
NZ_PYKA01000091.1	RefSeq	gene	2094	2609	.	+	.	ID=gene-C9E97_RS12175;Name=C9E97_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12175;old_locus_tag=C9E97_12460
NZ_PYKA01000091.1	Protein Homology	CDS	2094	2609	.	+	0	ID=cds-WP_001207653.1;Parent=gene-C9E97_RS12175;Dbxref=GenBank:WP_001207653.1;Name=WP_001207653.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461628.1;locus_tag=C9E97_RS12175;product=phage major tail tube protein;protein_id=WP_001207653.1;transl_table=11
NZ_PYKA01000091.1	RefSeq	gene	2664	2966	.	+	.	ID=gene-C9E97_RS12180;Name=C9E97_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12180;old_locus_tag=C9E97_12465
NZ_PYKA01000091.1	Protein Homology	CDS	2664	2966	.	+	0	ID=cds-WP_001280962.1;Parent=gene-C9E97_RS12180;Dbxref=GenBank:WP_001280962.1;Name=WP_001280962.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461627.1;locus_tag=C9E97_RS12180;product=phage tail assembly protein;protein_id=WP_001280962.1;transl_table=11
NZ_PYKA01000091.1	RefSeq	gene	2981	3100	.	+	.	ID=gene-C9E97_RS12185;Name=C9E97_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12185;old_locus_tag=C9E97_12470
NZ_PYKA01000091.1	Protein Homology	CDS	2981	3100	.	+	0	ID=cds-WP_000763317.1;Parent=gene-C9E97_RS12185;Dbxref=GenBank:WP_000763317.1;Name=WP_000763317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461626.1;locus_tag=C9E97_RS12185;product=GpE family phage tail protein;protein_id=WP_000763317.1;transl_table=11
NZ_PYKA01000091.1	RefSeq	gene	3093	5900	.	+	.	ID=gene-C9E97_RS12190;Name=C9E97_RS12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12190;old_locus_tag=C9E97_12475
NZ_PYKA01000091.1	Protein Homology	CDS	3093	5900	.	+	0	ID=cds-WP_023226825.1;Parent=gene-C9E97_RS12190;Dbxref=GenBank:WP_023226825.1;Name=WP_023226825.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461625.1;locus_tag=C9E97_RS12190;product=phage tail tape measure protein;protein_id=WP_023226825.1;transl_table=11
NZ_PYKA01000091.1	RefSeq	gene	5897	6382	.	+	.	ID=gene-C9E97_RS12195;Name=C9E97_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12195;old_locus_tag=C9E97_12480
NZ_PYKA01000091.1	Protein Homology	CDS	5897	6382	.	+	0	ID=cds-WP_000980409.1;Parent=gene-C9E97_RS12195;Dbxref=GenBank:WP_000980409.1;Name=WP_000980409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461624.1;locus_tag=C9E97_RS12195;product=phage tail protein;protein_id=WP_000980409.1;transl_table=11
NZ_PYKA01000091.1	RefSeq	gene	6379	7479	.	+	.	ID=gene-C9E97_RS12200;Name=C9E97_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12200;old_locus_tag=C9E97_12485
NZ_PYKA01000091.1	Protein Homology	CDS	6379	7479	.	+	0	ID=cds-WP_023226826.1;Parent=gene-C9E97_RS12200;Dbxref=GenBank:WP_023226826.1;Name=WP_023226826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461623.1;locus_tag=C9E97_RS12200;product=phage late control D family protein;protein_id=WP_023226826.1;transl_table=11
NZ_PYKA01000091.1	RefSeq	gene	7548	7766	.	+	.	ID=gene-C9E97_RS12205;Name=C9E97_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12205;old_locus_tag=C9E97_12490
NZ_PYKA01000091.1	Protein Homology	CDS	7548	7766	.	+	0	ID=cds-WP_000980498.1;Parent=gene-C9E97_RS12205;Dbxref=GenBank:WP_000980498.1;Name=WP_000980498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461622.1;locus_tag=C9E97_RS12205;product=ogr/Delta-like zinc finger family protein;protein_id=WP_000980498.1;transl_table=11
NZ_PYKA01000091.1	RefSeq	gene	8016	8858	.	-	.	ID=gene-C9E97_RS12210;Name=C9E97_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12210;old_locus_tag=C9E97_12495
NZ_PYKA01000091.1	Protein Homology	CDS	8016	8858	.	-	0	ID=cds-WP_186799053.1;Parent=gene-C9E97_RS12210;Dbxref=GenBank:WP_186799053.1;Name=WP_186799053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227719.1;locus_tag=C9E97_RS12210;product=DUF4942 domain-containing protein;protein_id=WP_186799053.1;transl_table=11
NZ_PYKA01000091.1	RefSeq	gene	8974	9315	.	-	.	ID=gene-C9E97_RS12215;Name=C9E97_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12215;old_locus_tag=C9E97_12500
NZ_PYKA01000091.1	Protein Homology	CDS	8974	9315	.	-	0	ID=cds-WP_135369458.1;Parent=gene-C9E97_RS12215;Dbxref=GenBank:WP_135369458.1;Name=WP_135369458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001194750.1;locus_tag=C9E97_RS12215;product=TA system toxin CbtA family protein;protein_id=WP_135369458.1;transl_table=11
NZ_PYKA01000091.1	RefSeq	gene	9358	9699	.	-	.	ID=gene-C9E97_RS12220;Name=C9E97_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12220;old_locus_tag=C9E97_12505
NZ_PYKA01000091.1	Protein Homology	CDS	9358	9699	.	-	0	ID=cds-WP_135369459.1;Parent=gene-C9E97_RS12220;Dbxref=GenBank:WP_135369459.1;Name=WP_135369459.1;Ontology_term=GO:0051495;gbkey=CDS;go_process=positive regulation of cytoskeleton organization|0051495||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380486.1;locus_tag=C9E97_RS12220;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_135369459.1;transl_table=11
NZ_PYKA01000091.1	RefSeq	gene	9732	9953	.	-	.	ID=gene-C9E97_RS12225;Name=C9E97_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12225;old_locus_tag=C9E97_12510
NZ_PYKA01000091.1	Protein Homology	CDS	9732	9953	.	-	0	ID=cds-WP_135369460.1;Parent=gene-C9E97_RS12225;Dbxref=GenBank:WP_135369460.1;Name=WP_135369460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246875.1;locus_tag=C9E97_RS12225;product=DUF987 family protein;protein_id=WP_135369460.1;transl_table=11
NZ_PYKA01000091.1	RefSeq	gene	9950	10453	.	-	.	ID=gene-C9E97_RS12230;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=C9E97_RS12230;old_locus_tag=C9E97_12515
NZ_PYKA01000091.1	Protein Homology	CDS	9950	10453	.	-	0	ID=cds-WP_135369461.1;Parent=gene-C9E97_RS12230;Dbxref=GenBank:WP_135369461.1;Name=WP_135369461.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694582.1;locus_tag=C9E97_RS12230;product=RadC family protein;protein_id=WP_135369461.1;transl_table=11
NZ_PYKA01000091.1	RefSeq	gene	10465	10932	.	-	.	ID=gene-C9E97_RS12235;Name=C9E97_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12235;old_locus_tag=C9E97_12520
NZ_PYKA01000091.1	Protein Homology	CDS	10465	10932	.	-	0	ID=cds-WP_135369462.1;Parent=gene-C9E97_RS12235;Dbxref=GenBank:WP_135369462.1;Name=WP_135369462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239282.1;locus_tag=C9E97_RS12235;product=antirestriction protein;protein_id=WP_135369462.1;transl_table=11
NZ_PYKA01000091.1	RefSeq	gene	11001	11819	.	-	.	ID=gene-C9E97_RS12240;Name=C9E97_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12240;old_locus_tag=C9E97_12525
NZ_PYKA01000091.1	Protein Homology	CDS	11001	11819	.	-	0	ID=cds-WP_135369463.1;Parent=gene-C9E97_RS12240;Dbxref=GenBank:WP_135369463.1;Name=WP_135369463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234406.1;locus_tag=C9E97_RS12240;product=DUF932 domain-containing protein;protein_id=WP_135369463.1;transl_table=11
NZ_PYKA01000091.1	RefSeq	gene	11928	12158	.	-	.	ID=gene-C9E97_RS12245;Name=C9E97_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12245;old_locus_tag=C9E97_12530
NZ_PYKA01000091.1	GeneMarkS-2+	CDS	11928	12158	.	-	0	ID=cds-WP_135369464.1;Parent=gene-C9E97_RS12245;Dbxref=GenBank:WP_135369464.1;Name=WP_135369464.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E97_RS12245;product=hypothetical protein;protein_id=WP_135369464.1;transl_table=11
NZ_PYKA01000091.1	RefSeq	gene	12155	12388	.	-	.	ID=gene-C9E97_RS12250;Name=C9E97_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12250;old_locus_tag=C9E97_12535
NZ_PYKA01000091.1	Protein Homology	CDS	12155	12388	.	-	0	ID=cds-WP_135369465.1;Parent=gene-C9E97_RS12250;Dbxref=GenBank:WP_135369465.1;Name=WP_135369465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000194654.1;locus_tag=C9E97_RS12250;product=DUF905 domain-containing protein;protein_id=WP_135369465.1;transl_table=11
NZ_PYKA01000091.1	RefSeq	gene	12463	13407	.	-	.	ID=gene-C9E97_RS12255;Name=C9E97_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12255;old_locus_tag=C9E97_12540
NZ_PYKA01000091.1	Protein Homology	CDS	12463	13407	.	-	0	ID=cds-WP_240776469.1;Parent=gene-C9E97_RS12255;Dbxref=GenBank:WP_240776469.1;Name=WP_240776469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000480477.1;locus_tag=C9E97_RS12255;product=Ivy family c-type lysozyme inhibitor;protein_id=WP_240776469.1;transl_table=11
NZ_PYKA01000091.1	RefSeq	gene	13473	13676	.	-	.	ID=gene-C9E97_RS12260;Name=C9E97_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12260;old_locus_tag=C9E97_12545
NZ_PYKA01000091.1	Protein Homology	CDS	13473	13676	.	-	0	ID=cds-WP_135369466.1;Parent=gene-C9E97_RS12260;Dbxref=GenBank:WP_135369466.1;Name=WP_135369466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001585291.1;locus_tag=C9E97_RS12260;product=transposase;protein_id=WP_135369466.1;transl_table=11
NZ_PYKA01000091.1	RefSeq	gene	13693	13839	.	-	.	ID=gene-C9E97_RS23475;Name=C9E97_RS23475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23475
NZ_PYKA01000091.1	Protein Homology	CDS	13693	13839	.	-	0	ID=cds-WP_023892166.1;Parent=gene-C9E97_RS23475;Dbxref=GenBank:WP_023892166.1;Name=WP_023892166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001383016.1;locus_tag=C9E97_RS23475;product=hypothetical protein;protein_id=WP_023892166.1;transl_table=11
NZ_PYKA01000091.1	RefSeq	gene	13912	14625	.	-	.	ID=gene-C9E97_RS12265;Name=C9E97_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12265;old_locus_tag=C9E97_12550
NZ_PYKA01000091.1	Protein Homology	CDS	13912	14625	.	-	0	ID=cds-WP_135369467.1;Parent=gene-C9E97_RS12265;Dbxref=GenBank:WP_135369467.1;Name=WP_135369467.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083853.1;locus_tag=C9E97_RS12265;product=helix-turn-helix transcriptional regulator;protein_id=WP_135369467.1;transl_table=11
NZ_PYKA01000091.1	RefSeq	gene	14979	15284	.	-	.	ID=gene-C9E97_RS12270;Name=C9E97_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12270;old_locus_tag=C9E97_12555
NZ_PYKA01000091.1	GeneMarkS-2+	CDS	14979	15284	.	-	0	ID=cds-WP_135369468.1;Parent=gene-C9E97_RS12270;Dbxref=GenBank:WP_135369468.1;Name=WP_135369468.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E97_RS12270;product=hypothetical protein;protein_id=WP_135369468.1;transl_table=11
NZ_PYKA01000091.1	RefSeq	gene	15850	16485	.	+	.	ID=gene-C9E97_RS12275;Name=C9E97_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12275;old_locus_tag=C9E97_12560
NZ_PYKA01000091.1	Protein Homology	CDS	15850	16485	.	+	0	ID=cds-WP_135369469.1;Parent=gene-C9E97_RS12275;Dbxref=GenBank:WP_135369469.1;Name=WP_135369469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015366922.1;locus_tag=C9E97_RS12275;product=CatA-like O-acetyltransferase%2C family 1;protein_id=WP_135369469.1;transl_table=11
##sequence-region NZ_PYKA01000088.1 1 16342
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000088.1	RefSeq	region	1	16342	.	+	.	ID=NZ_PYKA01000088.1:1..16342;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000088.1	RefSeq	gene	61	1461	.	-	.	ID=gene-C9E97_RS12090;Name=C9E97_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12090;old_locus_tag=C9E97_12375
NZ_PYKA01000088.1	Protein Homology	CDS	61	1461	.	-	0	ID=cds-WP_000724476.1;Parent=gene-C9E97_RS12090;Dbxref=GenBank:WP_000724476.1;Name=WP_000724476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462720.1;locus_tag=C9E97_RS12090;product=cytochrome-c peroxidase;protein_id=WP_000724476.1;transl_table=11
NZ_PYKA01000088.1	RefSeq	gene	1651	2283	.	-	.	ID=gene-C9E97_RS12095;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=C9E97_RS12095;old_locus_tag=C9E97_12380
NZ_PYKA01000088.1	Protein Homology	CDS	1651	2283	.	-	0	ID=cds-WP_000595416.1;Parent=gene-C9E97_RS12095;Dbxref=GenBank:WP_000595416.1;Name=WP_000595416.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462721.1;locus_tag=C9E97_RS12095;product=molecular chaperone TorD;protein_id=WP_000595416.1;transl_table=11
NZ_PYKA01000088.1	RefSeq	gene	2276	4828	.	-	.	ID=gene-C9E97_RS12100;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=C9E97_RS12100;old_locus_tag=C9E97_12385
NZ_PYKA01000088.1	Protein Homology	CDS	2276	4828	.	-	0	ID=cds-WP_052938651.1;Parent=gene-C9E97_RS12100;Dbxref=GenBank:WP_052938651.1;Name=WP_052938651.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462722.1;locus_tag=C9E97_RS12100;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_052938651.1;transl_table=11
NZ_PYKA01000088.1	RefSeq	gene	4818	6002	.	-	.	ID=gene-C9E97_RS12105;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=C9E97_RS12105;old_locus_tag=C9E97_12390
NZ_PYKA01000088.1	Protein Homology	CDS	4818	6002	.	-	0	ID=cds-WP_001230255.1;Parent=gene-C9E97_RS12105;Dbxref=GenBank:WP_001230255.1;Name=WP_001230255.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462723.1;locus_tag=C9E97_RS12105;product=pentaheme c-type cytochrome TorC;protein_id=WP_001230255.1;transl_table=11
NZ_PYKA01000088.1	RefSeq	gene	6132	6824	.	+	.	ID=gene-C9E97_RS12110;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=C9E97_RS12110;old_locus_tag=C9E97_12395
NZ_PYKA01000088.1	Protein Homology	CDS	6132	6824	.	+	0	ID=cds-WP_001562512.1;Parent=gene-C9E97_RS12110;Dbxref=GenBank:WP_001562512.1;Name=WP_001562512.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462724.1;locus_tag=C9E97_RS12110;product=two-component system response regulator TorR;protein_id=WP_001562512.1;transl_table=11
NZ_PYKA01000088.1	RefSeq	gene	6797	7837	.	-	.	ID=gene-C9E97_RS12115;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=C9E97_RS12115;old_locus_tag=C9E97_12400
NZ_PYKA01000088.1	Protein Homology	CDS	6797	7837	.	-	0	ID=cds-WP_045901455.1;Parent=gene-C9E97_RS12115;Dbxref=GenBank:WP_045901455.1;Name=WP_045901455.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462725.1;locus_tag=C9E97_RS12115;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_045901455.1;transl_table=11
NZ_PYKA01000088.1	RefSeq	gene	7917	10652	.	+	.	ID=gene-C9E97_RS12120;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=C9E97_RS12120;old_locus_tag=C9E97_12405
NZ_PYKA01000088.1	Protein Homology	CDS	7917	10652	.	+	0	ID=cds-WP_135369182.1;Parent=gene-C9E97_RS12120;Dbxref=GenBank:WP_135369182.1;Name=WP_135369182.1;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=C9E97_RS12120;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=WP_135369182.1;transl_table=11
NZ_PYKA01000088.1	RefSeq	gene	10757	11884	.	-	.	ID=gene-C9E97_RS12125;Name=C9E97_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12125;old_locus_tag=C9E97_12410
NZ_PYKA01000088.1	Protein Homology	CDS	10757	11884	.	-	0	ID=cds-WP_023224010.1;Parent=gene-C9E97_RS12125;Dbxref=GenBank:WP_023224010.1;Name=WP_023224010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762570.1;locus_tag=C9E97_RS12125;product=DUF4056 domain-containing protein;protein_id=WP_023224010.1;transl_table=11
NZ_PYKA01000088.1	RefSeq	gene	11881	13020	.	-	.	ID=gene-C9E97_RS12130;Name=C9E97_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12130;old_locus_tag=C9E97_12415
NZ_PYKA01000088.1	Protein Homology	CDS	11881	13020	.	-	0	ID=cds-WP_050067751.1;Parent=gene-C9E97_RS12130;Dbxref=GenBank:WP_050067751.1;Name=WP_050067751.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528293.1;locus_tag=C9E97_RS12130;product=BamA/TamA family outer membrane protein;protein_id=WP_050067751.1;transl_table=11
NZ_PYKA01000088.1	RefSeq	gene	13017	14039	.	-	.	ID=gene-C9E97_RS12135;Name=C9E97_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12135;old_locus_tag=C9E97_12420
NZ_PYKA01000088.1	Protein Homology	CDS	13017	14039	.	-	0	ID=cds-WP_135369183.1;Parent=gene-C9E97_RS12135;Dbxref=GenBank:WP_135369183.1;Name=WP_135369183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528257.1;locus_tag=C9E97_RS12135;product=hypothetical protein;protein_id=WP_135369183.1;transl_table=11
NZ_PYKA01000088.1	RefSeq	gene	14241	15053	.	-	.	ID=gene-C9E97_RS12140;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=C9E97_RS12140;old_locus_tag=C9E97_12425
NZ_PYKA01000088.1	Protein Homology	CDS	14241	15053	.	-	0	ID=cds-WP_000985571.1;Parent=gene-C9E97_RS12140;Dbxref=GenBank:WP_000985571.1;Name=WP_000985571.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418152.1;locus_tag=C9E97_RS12140;product=sugar-phosphatase;protein_id=WP_000985571.1;transl_table=11
NZ_PYKA01000088.1	RefSeq	gene	15493	16185	.	+	.	ID=gene-C9E97_RS12145;Name=C9E97_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS12145;old_locus_tag=C9E97_12430
NZ_PYKA01000088.1	Protein Homology	CDS	15493	16185	.	+	0	ID=cds-WP_080220794.1;Parent=gene-C9E97_RS12145;Dbxref=GenBank:WP_080220794.1;Name=WP_080220794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000691472.1;locus_tag=C9E97_RS12145;product=hypothetical protein;protein_id=WP_080220794.1;transl_table=11
##sequence-region NZ_PYKA01000032.1 1 15344
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000032.1	RefSeq	region	1	15344	.	+	.	ID=NZ_PYKA01000032.1:1..15344;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000032.1	RefSeq	gene	399	854	.	+	.	ID=gene-C9E97_RS03800;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=C9E97_RS03800;old_locus_tag=C9E97_03915
NZ_PYKA01000032.1	Protein Homology	CDS	399	854	.	+	0	ID=cds-WP_000791655.1;Parent=gene-C9E97_RS03800;Dbxref=GenBank:WP_000791655.1;Name=WP_000791655.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460114.1;locus_tag=C9E97_RS03800;product=curli minor subunit CsgB;protein_id=WP_000791655.1;transl_table=11
NZ_PYKA01000032.1	RefSeq	gene	896	1351	.	+	.	ID=gene-C9E97_RS03805;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=C9E97_RS03805;old_locus_tag=C9E97_03920
NZ_PYKA01000032.1	Protein Homology	CDS	896	1351	.	+	0	ID=cds-WP_000771416.1;Parent=gene-C9E97_RS03805;Dbxref=GenBank:WP_000771416.1;Name=WP_000771416.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460115.1;locus_tag=C9E97_RS03805;product=curli major subunit CsgA;protein_id=WP_000771416.1;transl_table=11
NZ_PYKA01000032.1	RefSeq	gene	1413	1739	.	+	.	ID=gene-C9E97_RS03810;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=C9E97_RS03810;old_locus_tag=C9E97_03925
NZ_PYKA01000032.1	Protein Homology	CDS	1413	1739	.	+	0	ID=cds-WP_000557256.1;Parent=gene-C9E97_RS03810;Dbxref=GenBank:WP_000557256.1;Name=WP_000557256.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460116.1;locus_tag=C9E97_RS03810;product=curli assembly chaperone CsgC;protein_id=WP_000557256.1;transl_table=11
NZ_PYKA01000032.1	RefSeq	gene	1870	2190	.	+	.	ID=gene-C9E97_RS03815;Name=C9E97_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03815;old_locus_tag=C9E97_03930
NZ_PYKA01000032.1	Protein Homology	CDS	1870	2190	.	+	0	ID=cds-WP_000111254.1;Parent=gene-C9E97_RS03815;Dbxref=GenBank:WP_000111254.1;Name=WP_000111254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460117.1;locus_tag=C9E97_RS03815;product=type 1 fimbrial protein;protein_id=WP_000111254.1;transl_table=11
NZ_PYKA01000032.1	RefSeq	gene	2279	2818	.	+	.	ID=gene-C9E97_RS03820;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=C9E97_RS03820;old_locus_tag=C9E97_03935
NZ_PYKA01000032.1	Protein Homology	CDS	2279	2818	.	+	0	ID=cds-WP_135369045.1;Parent=gene-C9E97_RS03820;Dbxref=GenBank:WP_135369045.1;Name=WP_135369045.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460118.1;locus_tag=C9E97_RS03820;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_135369045.1;transl_table=11
NZ_PYKA01000032.1	RefSeq	gene	2754	4241	.	+	.	ID=gene-C9E97_RS03825;Name=C9E97_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03825;old_locus_tag=C9E97_03940
NZ_PYKA01000032.1	Protein Homology	CDS	2754	4241	.	+	0	ID=cds-WP_001736196.1;Parent=gene-C9E97_RS03825;Dbxref=GenBank:WP_001736196.1;Name=WP_001736196.1;Ontology_term=GO:0032049,GO:0090483;gbkey=CDS;go_function=phosphatidylglycerol-phosphatidylethanolamine phosphatidyltransferase activity|0090483||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=C9E97_RS03825;product=phospholipase D family protein;protein_id=WP_001736196.1;transl_table=11
NZ_PYKA01000032.1	RefSeq	gene	4258	5412	.	-	.	ID=gene-C9E97_RS03830;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=C9E97_RS03830;old_locus_tag=C9E97_03945
NZ_PYKA01000032.1	Protein Homology	CDS	4258	5412	.	-	0	ID=cds-WP_135369044.1;Parent=gene-C9E97_RS03830;Dbxref=GenBank:WP_135369044.1;Name=WP_135369044.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460120.1;locus_tag=C9E97_RS03830;product=glucans biosynthesis protein MdoC;protein_id=WP_135369044.1;transl_table=11
NZ_PYKA01000032.1	RefSeq	gene	5684	7219	.	+	.	ID=gene-C9E97_RS03840;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=C9E97_RS03840;old_locus_tag=C9E97_03950
NZ_PYKA01000032.1	Protein Homology	CDS	5684	7219	.	+	0	ID=cds-WP_001562609.1;Parent=gene-C9E97_RS03840;Dbxref=GenBank:WP_001562609.1;Name=WP_001562609.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460121.1;locus_tag=C9E97_RS03840;product=glucans biosynthesis protein MdoG;protein_id=WP_001562609.1;transl_table=11
NZ_PYKA01000032.1	RefSeq	gene	7212	9755	.	+	.	ID=gene-C9E97_RS03845;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=C9E97_RS03845;old_locus_tag=C9E97_03955
NZ_PYKA01000032.1	Protein Homology	CDS	7212	9755	.	+	0	ID=cds-WP_001044614.1;Parent=gene-C9E97_RS03845;Dbxref=GenBank:WP_001044614.1;Name=WP_001044614.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460122.1;locus_tag=C9E97_RS03845;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_001044614.1;transl_table=11
NZ_PYKA01000032.1	RefSeq	gene	9829	10056	.	+	.	ID=gene-C9E97_RS03850;Name=C9E97_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03850;old_locus_tag=C9E97_03960
NZ_PYKA01000032.1	Protein Homology	CDS	9829	10056	.	+	0	ID=cds-WP_001217832.1;Parent=gene-C9E97_RS03850;Dbxref=GenBank:WP_001217832.1;Name=WP_001217832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460123.1;locus_tag=C9E97_RS03850;product=YceK/YidQ family lipoprotein;protein_id=WP_001217832.1;transl_table=11
NZ_PYKA01000032.1	RefSeq	gene	10057	10431	.	-	.	ID=gene-C9E97_RS03855;Name=C9E97_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03855;old_locus_tag=C9E97_03965
NZ_PYKA01000032.1	Protein Homology	CDS	10057	10431	.	-	0	ID=cds-WP_135369043.1;Parent=gene-C9E97_RS03855;Dbxref=GenBank:WP_135369043.1;Name=WP_135369043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460124.1;locus_tag=C9E97_RS03855;product=MysB family protein;protein_id=WP_135369043.1;transl_table=11
NZ_PYKA01000032.1	RefSeq	gene	10513	11727	.	-	.	ID=gene-C9E97_RS03860;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=C9E97_RS03860;old_locus_tag=C9E97_03970
NZ_PYKA01000032.1	Protein Homology	CDS	10513	11727	.	-	0	ID=cds-WP_000075053.1;Parent=gene-C9E97_RS03860;Dbxref=GenBank:WP_000075053.1;Name=WP_000075053.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460125.1;locus_tag=C9E97_RS03860;product=multidrug efflux MFS transporter MdtG;protein_id=WP_000075053.1;transl_table=11
NZ_PYKA01000032.1	RefSeq	gene	11882	12802	.	-	.	ID=gene-C9E97_RS03865;Name=C9E97_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03865;old_locus_tag=C9E97_03980
NZ_PYKA01000032.1	Protein Homology	CDS	11882	12802	.	-	0	ID=cds-WP_000163977.1;Parent=gene-C9E97_RS03865;Dbxref=GenBank:WP_000163977.1;Name=WP_000163977.1;Ontology_term=GO:0036104,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460126.1;locus_tag=C9E97_RS03865;product=Kdo(2)-lipid IV(A) acyltransferase;protein_id=WP_000163977.1;transl_table=11
NZ_PYKA01000032.1	RefSeq	gene	13022	14074	.	+	.	ID=gene-C9E97_RS03870;Name=C9E97_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03870;old_locus_tag=C9E97_03985
NZ_PYKA01000032.1	Protein Homology	CDS	13022	14074	.	+	0	ID=cds-WP_135369042.1;Parent=gene-C9E97_RS03870;Dbxref=GenBank:WP_135369042.1;Name=WP_135369042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460127.1;locus_tag=C9E97_RS03870;product=rhodanese-related sulfurtransferase;protein_id=WP_135369042.1;transl_table=11
NZ_PYKA01000032.1	RefSeq	gene	14126	14701	.	-	.	ID=gene-C9E97_RS03875;Name=C9E97_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03875;old_locus_tag=C9E97_03990
NZ_PYKA01000032.1	Protein Homology	CDS	14126	14701	.	-	0	ID=cds-WP_076735729.1;Parent=gene-C9E97_RS03875;Dbxref=GenBank:WP_076735729.1;Name=WP_076735729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460128.1;locus_tag=C9E97_RS03875;product=YceI family protein;protein_id=WP_076735729.1;transl_table=11
NZ_PYKA01000032.1	RefSeq	gene	14698	15270	.	-	.	ID=gene-C9E97_RS03880;Name=C9E97_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03880;old_locus_tag=C9E97_03995
NZ_PYKA01000032.1	Protein Homology	CDS	14698	15270	.	-	0	ID=cds-WP_076735728.1;Parent=gene-C9E97_RS03880;Dbxref=GenBank:WP_076735728.1;Name=WP_076735728.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460129.1;locus_tag=C9E97_RS03880;product=cytochrome b;protein_id=WP_076735728.1;transl_table=11
##sequence-region NZ_PYKA01000019.1 1 15231
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000019.1	RefSeq	region	1	15231	.	+	.	ID=NZ_PYKA01000019.1:1..15231;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000019.1	RefSeq	gene	380	1570	.	-	.	ID=gene-C9E97_RS01210;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=C9E97_RS01210;old_locus_tag=C9E97_01230
NZ_PYKA01000019.1	Protein Homology	CDS	380	1570	.	-	0	ID=cds-WP_001285724.1;Parent=gene-C9E97_RS01210;Dbxref=GenBank:WP_001285724.1;Name=WP_001285724.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461228.1;locus_tag=C9E97_RS01210;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_001285724.1;transl_table=11
NZ_PYKA01000019.1	RefSeq	gene	1567	2826	.	-	.	ID=gene-C9E97_RS01215;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=C9E97_RS01215;old_locus_tag=C9E97_01235
NZ_PYKA01000019.1	Protein Homology	CDS	1567	2826	.	-	0	ID=cds-WP_000667148.1;Parent=gene-C9E97_RS01215;Dbxref=GenBank:WP_000667148.1;Name=WP_000667148.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461227.1;locus_tag=C9E97_RS01215;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_000667148.1;transl_table=11
NZ_PYKA01000019.1	RefSeq	gene	2816	4444	.	-	.	ID=gene-C9E97_RS01220;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=C9E97_RS01220;old_locus_tag=C9E97_01240
NZ_PYKA01000019.1	Protein Homology	CDS	2816	4444	.	-	0	ID=cds-WP_000857205.1;Parent=gene-C9E97_RS01220;Dbxref=GenBank:WP_000857205.1;Name=WP_000857205.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461226.1;locus_tag=C9E97_RS01220;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_000857205.1;transl_table=11
NZ_PYKA01000019.1	RefSeq	gene	4717	6075	.	+	.	ID=gene-C9E97_RS01225;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=C9E97_RS01225;old_locus_tag=C9E97_01245
NZ_PYKA01000019.1	Protein Homology	CDS	4717	6075	.	+	0	ID=cds-WP_000948739.1;Parent=gene-C9E97_RS01225;Dbxref=GenBank:WP_000948739.1;Name=WP_000948739.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461225.1;locus_tag=C9E97_RS01225;product=glycerol-3-phosphate transporter;protein_id=WP_000948739.1;transl_table=11
NZ_PYKA01000019.1	RefSeq	gene	6080	7150	.	+	.	ID=gene-C9E97_RS01230;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=C9E97_RS01230;old_locus_tag=C9E97_01250
NZ_PYKA01000019.1	Protein Homology	CDS	6080	7150	.	+	0	ID=cds-WP_000858952.1;Parent=gene-C9E97_RS01230;Dbxref=GenBank:WP_000858952.1;Name=WP_000858952.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461224.1;locus_tag=C9E97_RS01230;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000858952.1;transl_table=11
NZ_PYKA01000019.1	RefSeq	gene	7266	8144	.	-	.	ID=gene-C9E97_RS01235;Name=C9E97_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01235;old_locus_tag=C9E97_01255
NZ_PYKA01000019.1	Protein Homology	CDS	7266	8144	.	-	0	ID=cds-WP_000176719.1;Parent=gene-C9E97_RS01235;Dbxref=GenBank:WP_000176719.1;Name=WP_000176719.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461223.1;locus_tag=C9E97_RS01235;product=LysR family transcriptional regulator;protein_id=WP_000176719.1;transl_table=11
NZ_PYKA01000019.1	RefSeq	gene	8306	9496	.	+	.	ID=gene-C9E97_RS01240;Name=C9E97_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01240;old_locus_tag=C9E97_01260
NZ_PYKA01000019.1	Protein Homology	CDS	8306	9496	.	+	0	ID=cds-WP_023205619.1;Parent=gene-C9E97_RS01240;Dbxref=GenBank:WP_023205619.1;Name=WP_023205619.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461222.1;locus_tag=C9E97_RS01240;product=MFS transporter;protein_id=WP_023205619.1;transl_table=11
NZ_PYKA01000019.1	RefSeq	gene	9498	9752	.	-	.	ID=gene-C9E97_RS01245;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=C9E97_RS01245;old_locus_tag=C9E97_01265
NZ_PYKA01000019.1	Protein Homology	CDS	9498	9752	.	-	0	ID=cds-WP_000533921.1;Parent=gene-C9E97_RS01245;Dbxref=GenBank:WP_000533921.1;Name=WP_000533921.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461221.1;locus_tag=C9E97_RS01245;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000533921.1;transl_table=11
NZ_PYKA01000019.1	RefSeq	gene	9752	10882	.	-	.	ID=gene-C9E97_RS01250;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=C9E97_RS01250;old_locus_tag=C9E97_01270
NZ_PYKA01000019.1	Protein Homology	CDS	9752	10882	.	-	0	ID=cds-WP_000332026.1;Parent=gene-C9E97_RS01250;Dbxref=GenBank:WP_000332026.1;Name=WP_000332026.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=C9E97_RS01250;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000332026.1;transl_table=11
NZ_PYKA01000019.1	RefSeq	gene	10995	13280	.	-	.	ID=gene-C9E97_RS01255;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=C9E97_RS01255;old_locus_tag=C9E97_01275
NZ_PYKA01000019.1	Protein Homology	CDS	10995	13280	.	-	0	ID=cds-WP_001076487.1;Parent=gene-C9E97_RS01255;Dbxref=GenBank:WP_001076487.1;Name=WP_001076487.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=C9E97_RS01255;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_001076487.1;transl_table=11
NZ_PYKA01000019.1	RefSeq	gene	13636	14364	.	-	.	ID=gene-C9E97_RS01260;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=C9E97_RS01260;old_locus_tag=C9E97_01280
NZ_PYKA01000019.1	Protein Homology	CDS	13636	14364	.	-	0	ID=cds-WP_001091009.1;Parent=gene-C9E97_RS01260;Dbxref=GenBank:WP_001091009.1;Name=WP_001091009.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461218.1;locus_tag=C9E97_RS01260;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_001091009.1;transl_table=11
NZ_PYKA01000019.1	RefSeq	gene	14447	15231	.	-	.	ID=gene-C9E97_RS01265;Name=C9E97_RS01265;end_range=15231,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS01265;old_locus_tag=C9E97_01285;partial=true
NZ_PYKA01000019.1	Protein Homology	CDS	14447	15231	.	-	2	ID=cds-WP_245304071.1;Parent=gene-C9E97_RS01265;Dbxref=GenBank:WP_245304071.1;Name=WP_245304071.1;Ontology_term=GO:0003677,GO:0003700;end_range=15231,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=C9E97_RS01265;partial=true;product=GntR family transcriptional regulator;protein_id=WP_245304071.1;transl_table=11
##sequence-region NZ_PYKA01000116.1 1 15045
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000116.1	RefSeq	region	1	15045	.	+	.	ID=NZ_PYKA01000116.1:1..15045;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000116.1	RefSeq	gene	118	525	.	+	.	ID=gene-C9E97_RS17940;Name=C9E97_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17940;old_locus_tag=C9E97_18335
NZ_PYKA01000116.1	Protein Homology	CDS	118	525	.	+	0	ID=cds-WP_000788200.1;Parent=gene-C9E97_RS17940;Dbxref=GenBank:WP_000788200.1;Name=WP_000788200.1;Ontology_term=GO:0061077,GO:0044183,GO:0051082;gbkey=CDS;go_function=protein folding chaperone|0044183||IEA,unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459305.1;locus_tag=C9E97_RS17940;product=Spy/CpxP family protein refolding chaperone;protein_id=WP_000788200.1;transl_table=11
NZ_PYKA01000116.1	RefSeq	gene	871	1590	.	+	.	ID=gene-C9E97_RS17945;Name=pagN;gbkey=Gene;gene=pagN;gene_biotype=protein_coding;locus_tag=C9E97_RS17945;old_locus_tag=C9E97_18340
NZ_PYKA01000116.1	Protein Homology	CDS	871	1590	.	+	0	ID=cds-WP_000787603.1;Parent=gene-C9E97_RS17945;Dbxref=GenBank:WP_000787603.1;Name=WP_000787603.1;gbkey=CDS;gene=pagN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459304.1;locus_tag=C9E97_RS17945;product=adhesin/invasin protein PagN;protein_id=WP_000787603.1;transl_table=11
NZ_PYKA01000116.1	RefSeq	gene	1594	1809	.	-	.	ID=gene-C9E97_RS17950;Name=C9E97_RS17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17950;old_locus_tag=C9E97_18345
NZ_PYKA01000116.1	Protein Homology	CDS	1594	1809	.	-	0	ID=cds-WP_135369203.1;Parent=gene-C9E97_RS17950;Dbxref=GenBank:WP_135369203.1;Name=WP_135369203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459303.1;locus_tag=C9E97_RS17950;product=hypothetical protein;protein_id=WP_135369203.1;transl_table=11
NZ_PYKA01000116.1	RefSeq	gene	1929	2876	.	-	.	ID=gene-C9E97_RS17955;Name=C9E97_RS17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17955;old_locus_tag=C9E97_18350
NZ_PYKA01000116.1	Protein Homology	CDS	1929	2876	.	-	0	ID=cds-WP_000970302.1;Parent=gene-C9E97_RS17955;Dbxref=GenBank:WP_000970302.1;Name=WP_000970302.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459302.1;locus_tag=C9E97_RS17955;product=LysR family transcriptional regulator;protein_id=WP_000970302.1;transl_table=11
NZ_PYKA01000116.1	RefSeq	pseudogene	3373	3610	.	-	.	ID=gene-C9E97_RS17960;Name=C9E97_RS17960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS17960;old_locus_tag=C9E97_18355;partial=true;pseudo=true;start_range=.,3373
NZ_PYKA01000116.1	Protein Homology	CDS	3373	3610	.	-	0	ID=cds-C9E97_RS17960;Parent=gene-C9E97_RS17960;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602066.1;locus_tag=C9E97_RS17960;partial=true;product=PerC family transcriptional regulator;pseudo=true;start_range=.,3373;transl_table=11
NZ_PYKA01000116.1	RefSeq	gene	3693	4514	.	-	.	ID=gene-C9E97_RS17965;Name=C9E97_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17965;old_locus_tag=C9E97_18360
NZ_PYKA01000116.1	Protein Homology	CDS	3693	4514	.	-	0	ID=cds-WP_000119391.1;Parent=gene-C9E97_RS17965;Dbxref=GenBank:WP_000119391.1;Name=WP_000119391.1;Ontology_term=GO:0005975,GO:0016787,GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459301.1;locus_tag=C9E97_RS17965;product=polysaccharide deacetylase family protein;protein_id=WP_000119391.1;transl_table=11
NZ_PYKA01000116.1	RefSeq	gene	4921	5391	.	-	.	ID=gene-C9E97_RS17970;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=C9E97_RS17970;old_locus_tag=C9E97_18365
NZ_PYKA01000116.1	Protein Homology	CDS	4921	5391	.	-	0	ID=cds-WP_135369204.1;Parent=gene-C9E97_RS17970;Dbxref=GenBank:WP_135369204.1;Name=WP_135369204.1;gbkey=CDS;gene=afaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000266935.1;locus_tag=C9E97_RS17970;product=AfaD family invasin;protein_id=WP_135369204.1;transl_table=11
NZ_PYKA01000116.1	RefSeq	gene	5413	7923	.	-	.	ID=gene-C9E97_RS17975;Name=C9E97_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17975;old_locus_tag=C9E97_18370
NZ_PYKA01000116.1	Protein Homology	CDS	5413	7923	.	-	0	ID=cds-WP_080164206.1;Parent=gene-C9E97_RS17975;Dbxref=GenBank:WP_080164206.1;Name=WP_080164206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459299.1;locus_tag=C9E97_RS17975;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_080164206.1;transl_table=11
NZ_PYKA01000116.1	RefSeq	gene	7947	8687	.	-	.	ID=gene-C9E97_RS17980;Name=safB;gbkey=Gene;gene=safB;gene_biotype=protein_coding;locus_tag=C9E97_RS17980;old_locus_tag=C9E97_18375
NZ_PYKA01000116.1	Protein Homology	CDS	7947	8687	.	-	0	ID=cds-WP_135369205.1;Parent=gene-C9E97_RS17980;Dbxref=GenBank:WP_135369205.1;Name=WP_135369205.1;gbkey=CDS;gene=safB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465813.1;locus_tag=C9E97_RS17980;product=pili assembly chaperone SafB;protein_id=WP_135369205.1;transl_table=11
NZ_PYKA01000116.1	RefSeq	gene	8762	9259	.	-	.	ID=gene-C9E97_RS17985;Name=C9E97_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17985;old_locus_tag=C9E97_18380
NZ_PYKA01000116.1	Protein Homology	CDS	8762	9259	.	-	0	ID=cds-WP_135369206.1;Parent=gene-C9E97_RS17985;Dbxref=GenBank:WP_135369206.1;Name=WP_135369206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789648.1;locus_tag=C9E97_RS17985;product=Saf-pilin pilus formation protein SafA;protein_id=WP_135369206.1;transl_table=11
NZ_PYKA01000116.1	RefSeq	pseudogene	10011	10581	.	-	.	ID=gene-C9E97_RS24100;Name=C9E97_RS24100;end_range=10581,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS24100;old_locus_tag=C9E97_18385;partial=true;pseudo=true
NZ_PYKA01000116.1	Protein Homology	CDS	10011	10581	.	-	0	ID=cds-C9E97_RS24100;Parent=gene-C9E97_RS24100;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=10581,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611501.1;locus_tag=C9E97_RS24100;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11
NZ_PYKA01000116.1	RefSeq	gene	10515	10712	.	-	.	ID=gene-C9E97_RS24005;Name=C9E97_RS24005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS24005
NZ_PYKA01000116.1	Protein Homology	CDS	10515	10712	.	-	0	ID=cds-WP_001224041.1;Parent=gene-C9E97_RS24005;Dbxref=GenBank:WP_001224041.1;Name=WP_001224041.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.6;locus_tag=C9E97_RS24005;product=transposase;protein_id=WP_001224041.1;transl_table=11
NZ_PYKA01000116.1	RefSeq	gene	10765	11079	.	+	.	ID=gene-C9E97_RS17995;Name=C9E97_RS17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17995;old_locus_tag=C9E97_18390
NZ_PYKA01000116.1	Protein Homology	CDS	10765	11079	.	+	0	ID=cds-WP_023892102.1;Parent=gene-C9E97_RS17995;Dbxref=GenBank:WP_023892102.1;Name=WP_023892102.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632802.1;locus_tag=C9E97_RS17995;product=SymE family type I addiction module toxin;protein_id=WP_023892102.1;transl_table=11
NZ_PYKA01000116.1	RefSeq	gene	11146	11424	.	-	.	ID=gene-C9E97_RS18000;Name=C9E97_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18000;old_locus_tag=C9E97_18395
NZ_PYKA01000116.1	Protein Homology	CDS	11146	11424	.	-	0	ID=cds-WP_012543321.1;Parent=gene-C9E97_RS18000;Dbxref=GenBank:WP_012543321.1;Name=WP_012543321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459293.1;locus_tag=C9E97_RS18000;product=hypothetical protein;protein_id=WP_012543321.1;transl_table=11
NZ_PYKA01000116.1	RefSeq	pseudogene	11555	11712	.	-	.	ID=gene-C9E97_RS24105;Name=C9E97_RS24105;end_range=11712,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS24105;old_locus_tag=C9E97_18400;partial=true;pseudo=true;start_range=.,11555
NZ_PYKA01000116.1	Protein Homology	CDS	11555	11712	.	-	0	ID=cds-C9E97_RS24105;Parent=gene-C9E97_RS24105;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=11712,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238642.1;locus_tag=C9E97_RS24105;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,11555;transl_table=11
NZ_PYKA01000116.1	RefSeq	gene	11742	12209	.	-	.	ID=gene-C9E97_RS18010;Name=C9E97_RS18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18010;old_locus_tag=C9E97_18405
NZ_PYKA01000116.1	Protein Homology	CDS	11742	12209	.	-	0	ID=cds-WP_063809038.1;Parent=gene-C9E97_RS18010;Dbxref=GenBank:WP_063809038.1;Name=WP_063809038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828176.1;locus_tag=C9E97_RS18010;product=hypothetical protein;protein_id=WP_063809038.1;transl_table=11
NZ_PYKA01000116.1	RefSeq	gene	12302	12577	.	-	.	ID=gene-C9E97_RS23590;Name=C9E97_RS23590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23590;old_locus_tag=C9E97_18410
NZ_PYKA01000116.1	GeneMarkS-2+	CDS	12302	12577	.	-	0	ID=cds-WP_223229629.1;Parent=gene-C9E97_RS23590;Dbxref=GenBank:WP_223229629.1;Name=WP_223229629.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E97_RS23590;product=hypothetical protein;protein_id=WP_223229629.1;transl_table=11
NZ_PYKA01000116.1	RefSeq	gene	13027	13320	.	-	.	ID=gene-C9E97_RS18025;Name=C9E97_RS18025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18025
NZ_PYKA01000116.1	GeneMarkS-2+	CDS	13027	13320	.	-	0	ID=cds-WP_125854225.1;Parent=gene-C9E97_RS18025;Dbxref=GenBank:WP_125854225.1;Name=WP_125854225.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=C9E97_RS18025;product=hypothetical protein;protein_id=WP_125854225.1;transl_table=11
NZ_PYKA01000116.1	RefSeq	pseudogene	13345	13517	.	-	.	ID=gene-C9E97_RS24110;Name=C9E97_RS24110;end_range=13517,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS24110;partial=true;pseudo=true;start_range=.,13345
NZ_PYKA01000116.1	Protein Homology	CDS	13345	13517	.	-	0	ID=cds-C9E97_RS24110;Parent=gene-C9E97_RS24110;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=13517,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=C9E97_RS24110;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,13345;transl_table=11
NZ_PYKA01000116.1	RefSeq	gene	13654	13899	.	+	.	ID=gene-C9E97_RS18030;Name=C9E97_RS18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18030;old_locus_tag=C9E97_18420
NZ_PYKA01000116.1	Protein Homology	CDS	13654	13899	.	+	0	ID=cds-WP_135369777.1;Parent=gene-C9E97_RS18030;Dbxref=GenBank:WP_135369777.1;Name=WP_135369777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000994230.1;locus_tag=C9E97_RS18030;product=hypothetical protein;protein_id=WP_135369777.1;transl_table=11
NZ_PYKA01000116.1	RefSeq	gene	13971	14396	.	-	.	ID=gene-C9E97_RS18035;Name=C9E97_RS18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18035;old_locus_tag=C9E97_18425
NZ_PYKA01000116.1	Protein Homology	CDS	13971	14396	.	-	0	ID=cds-WP_001805083.1;Parent=gene-C9E97_RS18035;Dbxref=GenBank:WP_001805083.1;Name=WP_001805083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001805083.1;locus_tag=C9E97_RS18035;product=hypothetical protein;protein_id=WP_001805083.1;transl_table=11
NZ_PYKA01000116.1	RefSeq	pseudogene	14371	14820	.	-	.	ID=gene-C9E97_RS18040;Name=C9E97_RS18040;end_range=14820,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS18040;old_locus_tag=C9E97_18430;partial=true;pseudo=true
NZ_PYKA01000116.1	Protein Homology	CDS	14371	14820	.	-	0	ID=cds-C9E97_RS18040;Parent=gene-C9E97_RS18040;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=14820,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000503220.1;locus_tag=C9E97_RS18040;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKA01000139.1 1 13062
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000139.1	RefSeq	region	1	13062	.	+	.	ID=NZ_PYKA01000139.1:1..13062;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000139.1	RefSeq	gene	78	395	.	+	.	ID=gene-C9E97_RS23270;Name=C9E97_RS23270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23270;old_locus_tag=C9E97_23815
NZ_PYKA01000139.1	Protein Homology	CDS	78	395	.	+	0	ID=cds-WP_135369526.1;Parent=gene-C9E97_RS23270;Dbxref=GenBank:WP_135369526.1;Name=WP_135369526.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF044473.3;locus_tag=C9E97_RS23270;product=PAAR domain-containing protein;protein_id=WP_135369526.1;transl_table=11
NZ_PYKA01000139.1	RefSeq	gene	392	658	.	+	.	ID=gene-C9E97_RS23275;Name=C9E97_RS23275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23275;old_locus_tag=C9E97_23820
NZ_PYKA01000139.1	Protein Homology	CDS	392	658	.	+	0	ID=cds-WP_000768133.1;Parent=gene-C9E97_RS23275;Dbxref=GenBank:WP_000768133.1;Name=WP_000768133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768134.1;locus_tag=C9E97_RS23275;product=STY3281 family bacteriocin immunity protein;protein_id=WP_000768133.1;transl_table=11
NZ_PYKA01000139.1	RefSeq	pseudogene	680	886	.	+	.	ID=gene-C9E97_RS24020;Name=C9E97_RS24020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS24020;old_locus_tag=C9E97_23825;partial=true;pseudo=true;start_range=.,680
NZ_PYKA01000139.1	Protein Homology	CDS	680	886	.	+	0	ID=cds-C9E97_RS24020;Parent=gene-C9E97_RS24020;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF044473.3;locus_tag=C9E97_RS24020;partial=true;product=type VI secretion system tube protein TssD;pseudo=true;start_range=.,680;transl_table=11
NZ_PYKA01000139.1	RefSeq	gene	901	1179	.	+	.	ID=gene-C9E97_RS23285;Name=C9E97_RS23285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23285;old_locus_tag=C9E97_23830
NZ_PYKA01000139.1	Protein Homology	CDS	901	1179	.	+	0	ID=cds-WP_000421096.1;Parent=gene-C9E97_RS23285;Dbxref=GenBank:WP_000421096.1;Name=WP_000421096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001729069.1;locus_tag=C9E97_RS23285;product=bacteriocin immunity protein;protein_id=WP_000421096.1;transl_table=11
NZ_PYKA01000139.1	RefSeq	gene	1568	2071	.	+	.	ID=gene-C9E97_RS23290;Name=C9E97_RS23290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23290;old_locus_tag=C9E97_23835
NZ_PYKA01000139.1	Protein Homology	CDS	1568	2071	.	+	0	ID=cds-WP_135420218.1;Parent=gene-C9E97_RS23290;Dbxref=GenBank:WP_135420218.1;Name=WP_135420218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151807.1;locus_tag=C9E97_RS23290;product=hypothetical protein;protein_id=WP_135420218.1;transl_table=11
NZ_PYKA01000139.1	RefSeq	pseudogene	2293	2514	.	+	.	ID=gene-C9E97_RS23300;Name=C9E97_RS23300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23300;old_locus_tag=C9E97_23840;pseudo=true
NZ_PYKA01000139.1	Protein Homology	CDS	2293	2514	.	+	0	ID=cds-C9E97_RS23300;Parent=gene-C9E97_RS23300;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023120.6;locus_tag=C9E97_RS23300;product=DUF3289 family protein;pseudo=true;transl_table=11
NZ_PYKA01000139.1	RefSeq	gene	2717	3241	.	+	.	ID=gene-C9E97_RS23305;Name=C9E97_RS23305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23305;old_locus_tag=C9E97_23845
NZ_PYKA01000139.1	Protein Homology	CDS	2717	3241	.	+	0	ID=cds-WP_001805649.1;Parent=gene-C9E97_RS23305;Dbxref=GenBank:WP_001805649.1;Name=WP_001805649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504929.1;locus_tag=C9E97_RS23305;product=DUF943 family protein;protein_id=WP_001805649.1;transl_table=11
NZ_PYKA01000139.1	RefSeq	gene	3219	3869	.	+	.	ID=gene-C9E97_RS23310;Name=C9E97_RS23310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23310;old_locus_tag=C9E97_23850
NZ_PYKA01000139.1	Protein Homology	CDS	3219	3869	.	+	0	ID=cds-WP_039518521.1;Parent=gene-C9E97_RS23310;Dbxref=GenBank:WP_039518521.1;Name=WP_039518521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000724403.1;locus_tag=C9E97_RS23310;product=hypothetical protein;protein_id=WP_039518521.1;transl_table=11
NZ_PYKA01000139.1	RefSeq	gene	5303	5986	.	+	.	ID=gene-C9E97_RS23325;Name=C9E97_RS23325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23325;old_locus_tag=C9E97_23865
NZ_PYKA01000139.1	Protein Homology	CDS	5303	5986	.	+	0	ID=cds-WP_001275354.1;Parent=gene-C9E97_RS23325;Dbxref=GenBank:WP_001275354.1;Name=WP_001275354.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462039.1;locus_tag=C9E97_RS23325;product=helix-turn-helix transcriptional regulator;protein_id=WP_001275354.1;transl_table=11
NZ_PYKA01000139.1	RefSeq	gene	6091	6648	.	-	.	ID=gene-C9E97_RS23330;Name=C9E97_RS23330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23330;old_locus_tag=C9E97_23870
NZ_PYKA01000139.1	Protein Homology	CDS	6091	6648	.	-	0	ID=cds-WP_023237540.1;Parent=gene-C9E97_RS23330;Dbxref=GenBank:WP_023237540.1;Name=WP_023237540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462040.1;locus_tag=C9E97_RS23330;product=DUF3156 family protein;protein_id=WP_023237540.1;transl_table=11
NZ_PYKA01000139.1	RefSeq	gene	6626	8125	.	-	.	ID=gene-C9E97_RS23335;Name=C9E97_RS23335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23335;old_locus_tag=C9E97_23875
NZ_PYKA01000139.1	Protein Homology	CDS	6626	8125	.	-	0	ID=cds-WP_000475960.1;Parent=gene-C9E97_RS23335;Dbxref=GenBank:WP_000475960.1;Name=WP_000475960.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462041.1;locus_tag=C9E97_RS23335;product=APC family permease;protein_id=WP_000475960.1;transl_table=11
NZ_PYKA01000139.1	RefSeq	gene	8334	8708	.	-	.	ID=gene-C9E97_RS23340;Name=C9E97_RS23340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23340;old_locus_tag=C9E97_23880
NZ_PYKA01000139.1	Protein Homology	CDS	8334	8708	.	-	0	ID=cds-WP_000542980.1;Parent=gene-C9E97_RS23340;Dbxref=GenBank:WP_000542980.1;Name=WP_000542980.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462042.1;locus_tag=C9E97_RS23340;product=cupin domain-containing protein;protein_id=WP_000542980.1;transl_table=11
NZ_PYKA01000139.1	RefSeq	gene	8723	10024	.	-	.	ID=gene-C9E97_RS23345;Name=C9E97_RS23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23345;old_locus_tag=C9E97_23885
NZ_PYKA01000139.1	Protein Homology	CDS	8723	10024	.	-	0	ID=cds-WP_001092827.1;Parent=gene-C9E97_RS23345;Dbxref=GenBank:WP_001092827.1;Name=WP_001092827.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462043.1;locus_tag=C9E97_RS23345;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_001092827.1;transl_table=11
NZ_PYKA01000139.1	RefSeq	gene	10186	11670	.	+	.	ID=gene-C9E97_RS23350;Name=C9E97_RS23350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23350;old_locus_tag=C9E97_23890
NZ_PYKA01000139.1	Protein Homology	CDS	10186	11670	.	+	0	ID=cds-WP_135369722.1;Parent=gene-C9E97_RS23350;Dbxref=GenBank:WP_135369722.1;Name=WP_135369722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462044.1;locus_tag=C9E97_RS23350;product=NAD-dependent phenylacetaldehyde dehydrogenase;protein_id=WP_135369722.1;transl_table=11
NZ_PYKA01000139.1	RefSeq	gene	11806	12186	.	-	.	ID=gene-C9E97_RS23355;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=C9E97_RS23355;old_locus_tag=C9E97_23895
NZ_PYKA01000139.1	Protein Homology	CDS	11806	12186	.	-	0	ID=cds-WP_000988938.1;Parent=gene-C9E97_RS23355;Dbxref=GenBank:WP_000988938.1;Name=WP_000988938.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462045.1;locus_tag=C9E97_RS23355;product=anti-adapter protein IraD;protein_id=WP_000988938.1;transl_table=11
NZ_PYKA01000139.1	RefSeq	gene	12186	12671	.	-	.	ID=gene-C9E97_RS23360;Name=C9E97_RS23360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23360;old_locus_tag=C9E97_23900
NZ_PYKA01000139.1	Protein Homology	CDS	12186	12671	.	-	0	ID=cds-WP_135369721.1;Parent=gene-C9E97_RS23360;Dbxref=GenBank:WP_135369721.1;Name=WP_135369721.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462046.1;locus_tag=C9E97_RS23360;product=Hcp family type VI secretion system effector;protein_id=WP_135369721.1;transl_table=11
##sequence-region NZ_PYKA01000044.1 1 106706
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000044.1	RefSeq	region	1	106706	.	+	.	ID=NZ_PYKA01000044.1:1..106706;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000044.1	RefSeq	gene	252	707	.	+	.	ID=gene-C9E97_RS05975;Name=C9E97_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05975;old_locus_tag=C9E97_06120
NZ_PYKA01000044.1	Protein Homology	CDS	252	707	.	+	0	ID=cds-WP_000985653.1;Parent=gene-C9E97_RS05975;Dbxref=GenBank:WP_000985653.1;Name=WP_000985653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461590.1;locus_tag=C9E97_RS05975;product=DUF4385 domain-containing protein;protein_id=WP_000985653.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	811	2112	.	+	.	ID=gene-C9E97_RS05980;Name=C9E97_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05980;old_locus_tag=C9E97_06125
NZ_PYKA01000044.1	Protein Homology	CDS	811	2112	.	+	0	ID=cds-WP_000807818.1;Parent=gene-C9E97_RS05980;Dbxref=GenBank:WP_000807818.1;Name=WP_000807818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461589.1;locus_tag=C9E97_RS05980;product=MFS transporter;protein_id=WP_000807818.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	2109	2432	.	-	.	ID=gene-C9E97_RS05985;Name=C9E97_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS05985;old_locus_tag=C9E97_06130
NZ_PYKA01000044.1	Protein Homology	CDS	2109	2432	.	-	0	ID=cds-WP_001264467.1;Parent=gene-C9E97_RS05985;Dbxref=GenBank:WP_001264467.1;Name=WP_001264467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461588.1;locus_tag=C9E97_RS05985;product=YfiM family lipoprotein;protein_id=WP_001264467.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	2475	3830	.	-	.	ID=gene-C9E97_RS05990;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=C9E97_RS05990;old_locus_tag=C9E97_06135
NZ_PYKA01000044.1	Protein Homology	CDS	2475	3830	.	-	0	ID=cds-WP_000949286.1;Parent=gene-C9E97_RS05990;Dbxref=GenBank:WP_000949286.1;Name=WP_000949286.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=C9E97_RS05990;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_000949286.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	3945	6605	.	-	.	ID=gene-C9E97_RS05995;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=C9E97_RS05995;old_locus_tag=C9E97_06140
NZ_PYKA01000044.1	Protein Homology	CDS	3945	6605	.	-	0	ID=cds-WP_000082643.1;Parent=gene-C9E97_RS05995;Dbxref=GenBank:WP_000082643.1;Name=WP_000082643.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=C9E97_RS05995;product=protein lysine acetyltransferase;protein_id=WP_000082643.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	6659	7339	.	-	.	ID=gene-C9E97_RS06000;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=C9E97_RS06000;old_locus_tag=C9E97_06145
NZ_PYKA01000044.1	Protein Homology	CDS	6659	7339	.	-	0	ID=cds-WP_000183641.1;Parent=gene-C9E97_RS06000;Dbxref=GenBank:WP_000183641.1;Name=WP_000183641.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461585.1;locus_tag=C9E97_RS06000;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_000183641.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	7412	7831	.	-	.	ID=gene-C9E97_RS06005;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=C9E97_RS06005;old_locus_tag=C9E97_06150
NZ_PYKA01000044.1	Protein Homology	CDS	7412	7831	.	-	0	ID=cds-WP_001098732.1;Parent=gene-C9E97_RS06005;Dbxref=GenBank:WP_001098732.1;Name=WP_001098732.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461584.1;locus_tag=C9E97_RS06005;product=thioredoxin TrxC;protein_id=WP_001098732.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	8035	9072	.	+	.	ID=gene-C9E97_RS06010;Name=C9E97_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06010;old_locus_tag=C9E97_06155
NZ_PYKA01000044.1	Protein Homology	CDS	8035	9072	.	+	0	ID=cds-WP_000997368.1;Parent=gene-C9E97_RS06010;Dbxref=GenBank:WP_000997368.1;Name=WP_000997368.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461583.1;locus_tag=C9E97_RS06010;product=tRNA/rRNA methyltransferase;protein_id=WP_000997368.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	9188	9877	.	-	.	ID=gene-C9E97_RS06015;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=C9E97_RS06015;old_locus_tag=C9E97_06160
NZ_PYKA01000044.1	Protein Homology	CDS	9188	9877	.	-	0	ID=cds-WP_000179978.1;Parent=gene-C9E97_RS06015;Dbxref=GenBank:WP_000179978.1;Name=WP_000179978.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461582.1;locus_tag=C9E97_RS06015;product=uracil-DNA glycosylase;protein_id=WP_000179978.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	10196	10579	.	+	.	ID=gene-C9E97_RS06020;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=C9E97_RS06020;old_locus_tag=C9E97_06165
NZ_PYKA01000044.1	Protein Homology	CDS	10196	10579	.	+	0	ID=cds-WP_000627811.1;Parent=gene-C9E97_RS06020;Dbxref=GenBank:WP_000627811.1;Name=WP_000627811.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=C9E97_RS06020;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627811.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	10641	11228	.	-	.	ID=gene-C9E97_RS06025;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=C9E97_RS06025;old_locus_tag=C9E97_06170
NZ_PYKA01000044.1	Protein Homology	CDS	10641	11228	.	-	0	ID=cds-WP_000188410.1;Parent=gene-C9E97_RS06025;Dbxref=GenBank:WP_000188410.1;Name=WP_000188410.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461580.1;locus_tag=C9E97_RS06025;product=cysteine/O-acetylserine transporter;protein_id=WP_000188410.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	11331	12230	.	+	.	ID=gene-C9E97_RS06030;Name=C9E97_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06030;old_locus_tag=C9E97_06175
NZ_PYKA01000044.1	Protein Homology	CDS	11331	12230	.	+	0	ID=cds-WP_001670786.1;Parent=gene-C9E97_RS06030;Dbxref=GenBank:WP_001670786.1;Name=WP_001670786.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461579.1;locus_tag=C9E97_RS06030;product=LysR family transcriptional regulator;protein_id=WP_001670786.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	12248	13582	.	-	.	ID=gene-C9E97_RS06035;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=C9E97_RS06035;old_locus_tag=C9E97_06180
NZ_PYKA01000044.1	Protein Homology	CDS	12248	13582	.	-	0	ID=cds-WP_135369047.1;Parent=gene-C9E97_RS06035;Dbxref=GenBank:WP_135369047.1;Name=WP_135369047.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461578.1;locus_tag=C9E97_RS06035;product=ATP-dependent RNA helicase SrmB;protein_id=WP_135369047.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	13713	14450	.	+	.	ID=gene-C9E97_RS06040;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=C9E97_RS06040;old_locus_tag=C9E97_06185
NZ_PYKA01000044.1	Protein Homology	CDS	13713	14450	.	+	0	ID=cds-WP_135369048.1;Parent=gene-C9E97_RS06040;Dbxref=GenBank:WP_135369048.1;Name=WP_135369048.1;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461577.1;locus_tag=C9E97_RS06040;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_135369048.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	14435	16057	.	-	.	ID=gene-C9E97_RS06045;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=C9E97_RS06045;old_locus_tag=C9E97_06190
NZ_PYKA01000044.1	Protein Homology	CDS	14435	16057	.	-	0	ID=cds-WP_000989184.1;Parent=gene-C9E97_RS06045;Dbxref=GenBank:WP_000989184.1;Name=WP_000989184.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461576.1;locus_tag=C9E97_RS06045;product=L-aspartate oxidase;protein_id=WP_000989184.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	16321	16485	.	+	.	ID=gene-C9E97_RS06055;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=C9E97_RS06055
NZ_PYKA01000044.1	Protein Homology	CDS	16321	16485	.	+	0	ID=cds-WP_014344135.1;Parent=gene-C9E97_RS06055;Dbxref=GenBank:WP_014344135.1;Name=WP_014344135.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344135.1;locus_tag=C9E97_RS06055;product=rpoE leader peptide RseD;protein_id=WP_014344135.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	16482	17057	.	+	.	ID=gene-C9E97_RS06060;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=C9E97_RS06060;old_locus_tag=C9E97_06200
NZ_PYKA01000044.1	Protein Homology	CDS	16482	17057	.	+	0	ID=cds-WP_000003307.1;Parent=gene-C9E97_RS06060;Dbxref=GenBank:WP_000003307.1;Name=WP_000003307.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=C9E97_RS06060;product=RNA polymerase sigma factor RpoE;protein_id=WP_000003307.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	17089	17739	.	+	.	ID=gene-C9E97_RS06065;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=C9E97_RS06065;old_locus_tag=C9E97_06205
NZ_PYKA01000044.1	Protein Homology	CDS	17089	17739	.	+	0	ID=cds-WP_020839156.1;Parent=gene-C9E97_RS06065;Dbxref=GenBank:WP_020839156.1;Name=WP_020839156.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461574.1;locus_tag=C9E97_RS06065;product=anti-sigma-E factor RseA;protein_id=WP_020839156.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	17739	18695	.	+	.	ID=gene-C9E97_RS06070;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=C9E97_RS06070;old_locus_tag=C9E97_06210
NZ_PYKA01000044.1	Protein Homology	CDS	17739	18695	.	+	0	ID=cds-WP_000812021.1;Parent=gene-C9E97_RS06070;Dbxref=GenBank:WP_000812021.1;Name=WP_000812021.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461573.1;locus_tag=C9E97_RS06070;product=sigma-E factor regulatory protein RseB;protein_id=WP_000812021.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	18692	19171	.	+	.	ID=gene-C9E97_RS06075;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=C9E97_RS06075;old_locus_tag=C9E97_06215
NZ_PYKA01000044.1	Protein Homology	CDS	18692	19171	.	+	0	ID=cds-WP_000589088.1;Parent=gene-C9E97_RS06075;Dbxref=GenBank:WP_000589088.1;Name=WP_000589088.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461572.1;locus_tag=C9E97_RS06075;product=SoxR-reducing system protein RseC;protein_id=WP_000589088.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	19423	21222	.	+	.	ID=gene-C9E97_RS06085;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=C9E97_RS06085;old_locus_tag=C9E97_06225
NZ_PYKA01000044.1	Protein Homology	CDS	19423	21222	.	+	0	ID=cds-WP_000790154.1;Parent=gene-C9E97_RS06085;Dbxref=GenBank:WP_000790154.1;Name=WP_000790154.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461518.1;locus_tag=C9E97_RS06085;product=translation elongation factor 4;protein_id=WP_000790154.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	21239	22213	.	+	.	ID=gene-C9E97_RS06090;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=C9E97_RS06090;old_locus_tag=C9E97_06230
NZ_PYKA01000044.1	Protein Homology	CDS	21239	22213	.	+	0	ID=cds-WP_000002559.1;Parent=gene-C9E97_RS06090;Dbxref=GenBank:WP_000002559.1;Name=WP_000002559.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461517.1;locus_tag=C9E97_RS06090;product=signal peptidase I;protein_id=WP_000002559.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	22487	23167	.	+	.	ID=gene-C9E97_RS06095;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=C9E97_RS06095;old_locus_tag=C9E97_06240
NZ_PYKA01000044.1	Protein Homology	CDS	22487	23167	.	+	0	ID=cds-WP_001068341.1;Parent=gene-C9E97_RS06095;Dbxref=GenBank:WP_001068341.1;Name=WP_001068341.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=C9E97_RS06095;product=ribonuclease III;protein_id=WP_001068341.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	23164	24069	.	+	.	ID=gene-C9E97_RS06100;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=C9E97_RS06100;old_locus_tag=C9E97_06245
NZ_PYKA01000044.1	Protein Homology	CDS	23164	24069	.	+	0	ID=cds-WP_000102230.1;Parent=gene-C9E97_RS06100;Dbxref=GenBank:WP_000102230.1;Name=WP_000102230.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461515.1;locus_tag=C9E97_RS06100;product=GTPase Era;protein_id=WP_000102230.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	24081	24809	.	+	.	ID=gene-C9E97_RS06105;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=C9E97_RS06105;old_locus_tag=C9E97_06250
NZ_PYKA01000044.1	Protein Homology	CDS	24081	24809	.	+	0	ID=cds-WP_000399380.1;Parent=gene-C9E97_RS06105;Dbxref=GenBank:WP_000399380.1;Name=WP_000399380.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461514.1;locus_tag=C9E97_RS06105;product=DNA repair protein RecO;protein_id=WP_000399380.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	24821	25552	.	+	.	ID=gene-C9E97_RS06110;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=C9E97_RS06110;old_locus_tag=C9E97_06255
NZ_PYKA01000044.1	Protein Homology	CDS	24821	25552	.	+	0	ID=cds-WP_000818969.1;Parent=gene-C9E97_RS06110;Dbxref=GenBank:WP_000818969.1;Name=WP_000818969.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461513.1;locus_tag=C9E97_RS06110;product=pyridoxine 5'-phosphate synthase;protein_id=WP_000818969.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	25552	25932	.	+	.	ID=gene-C9E97_RS06115;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=C9E97_RS06115;old_locus_tag=C9E97_06260
NZ_PYKA01000044.1	Protein Homology	CDS	25552	25932	.	+	0	ID=cds-WP_000986042.1;Parent=gene-C9E97_RS06115;Dbxref=GenBank:WP_000986042.1;Name=WP_000986042.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461512.1;locus_tag=C9E97_RS06115;product=holo-ACP synthase;protein_id=WP_000986042.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	26044	26304	.	-	.	ID=gene-C9E97_RS06120;Name=C9E97_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06120;old_locus_tag=C9E97_06265
NZ_PYKA01000044.1	Protein Homology	CDS	26044	26304	.	-	0	ID=cds-WP_001196290.1;Parent=gene-C9E97_RS06120;Dbxref=GenBank:WP_001196290.1;Name=WP_001196290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461511.1;locus_tag=C9E97_RS06120;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_001196290.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	26342	27268	.	-	.	ID=gene-C9E97_RS06125;Name=C9E97_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06125;old_locus_tag=C9E97_06270
NZ_PYKA01000044.1	Protein Homology	CDS	26342	27268	.	-	0	ID=cds-WP_001022463.1;Parent=gene-C9E97_RS06125;Dbxref=GenBank:WP_001022463.1;Name=WP_001022463.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461510.1;locus_tag=C9E97_RS06125;product=LysR family transcriptional regulator;protein_id=WP_001022463.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	27384	28580	.	+	.	ID=gene-C9E97_RS06130;Name=C9E97_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06130;old_locus_tag=C9E97_06275
NZ_PYKA01000044.1	Protein Homology	CDS	27384	28580	.	+	0	ID=cds-WP_001276364.1;Parent=gene-C9E97_RS06130;Dbxref=GenBank:WP_001276364.1;Name=WP_001276364.1;Ontology_term=GO:0015129;gbkey=CDS;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461509.1;locus_tag=C9E97_RS06130;product=L-lactate MFS transporter;protein_id=WP_001276364.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	28602	29519	.	+	.	ID=gene-C9E97_RS06135;Name=C9E97_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06135;old_locus_tag=C9E97_06280
NZ_PYKA01000044.1	Protein Homology	CDS	28602	29519	.	+	0	ID=cds-WP_000684022.1;Parent=gene-C9E97_RS06135;Dbxref=GenBank:WP_000684022.1;Name=WP_000684022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461508.1;locus_tag=C9E97_RS06135;product=oxidoreductase;protein_id=WP_000684022.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	29558	30406	.	-	.	ID=gene-C9E97_RS06140;Name=C9E97_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06140;old_locus_tag=C9E97_06285
NZ_PYKA01000044.1	Protein Homology	CDS	29558	30406	.	-	0	ID=cds-WP_000995703.1;Parent=gene-C9E97_RS06140;Dbxref=GenBank:WP_000995703.1;Name=WP_000995703.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461507.1;locus_tag=C9E97_RS06140;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000995703.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	30522	31415	.	+	.	ID=gene-C9E97_RS06145;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=C9E97_RS06145;old_locus_tag=C9E97_06290
NZ_PYKA01000044.1	Protein Homology	CDS	30522	31415	.	+	0	ID=cds-WP_061582385.1;Parent=gene-C9E97_RS06145;Dbxref=GenBank:WP_061582385.1;Name=WP_061582385.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461506.1;locus_tag=C9E97_RS06145;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_061582385.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	31426	32787	.	+	.	ID=gene-C9E97_RS06150;Name=C9E97_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06150;old_locus_tag=C9E97_06295
NZ_PYKA01000044.1	Protein Homology	CDS	31426	32787	.	+	0	ID=cds-WP_000361660.1;Parent=gene-C9E97_RS06150;Dbxref=GenBank:WP_000361660.1;Name=WP_000361660.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461505.1;locus_tag=C9E97_RS06150;product=PTS transporter subunit EIIC;protein_id=WP_000361660.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	32791	33426	.	+	.	ID=gene-C9E97_RS06155;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=C9E97_RS06155;old_locus_tag=C9E97_06300
NZ_PYKA01000044.1	Protein Homology	CDS	32791	33426	.	+	0	ID=cds-WP_000253558.1;Parent=gene-C9E97_RS06155;Dbxref=GenBank:WP_000253558.1;Name=WP_000253558.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=C9E97_RS06155;product=phosphatidylglycerophosphatase C;protein_id=WP_000253558.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	33451	34002	.	+	.	ID=gene-C9E97_RS06160;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=C9E97_RS06160;old_locus_tag=C9E97_06305
NZ_PYKA01000044.1	Protein Homology	CDS	33451	34002	.	+	0	ID=cds-WP_001134566.1;Parent=gene-C9E97_RS06160;Dbxref=GenBank:WP_001134566.1;Name=WP_001134566.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461503.1;locus_tag=C9E97_RS06160;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_001134566.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	34053	35597	.	-	.	ID=gene-C9E97_RS06165;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=C9E97_RS06165;old_locus_tag=C9E97_06310
NZ_PYKA01000044.1	Protein Homology	CDS	34053	35597	.	-	0	ID=cds-WP_000734249.1;Parent=gene-C9E97_RS06165;Dbxref=GenBank:WP_000734249.1;Name=WP_000734249.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=C9E97_RS06165;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_000734249.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	35598	35828	.	-	.	ID=gene-C9E97_RS06170;Name=C9E97_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06170;old_locus_tag=C9E97_06315
NZ_PYKA01000044.1	Protein Homology	CDS	35598	35828	.	-	0	ID=cds-WP_001667771.1;Parent=gene-C9E97_RS06170;Dbxref=GenBank:WP_001667771.1;Name=WP_001667771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669324.1;locus_tag=C9E97_RS06170;product=hypothetical protein;protein_id=WP_001667771.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	35853	39740	.	+	.	ID=gene-C9E97_RS06175;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=C9E97_RS06175;old_locus_tag=C9E97_06320
NZ_PYKA01000044.1	Protein Homology	CDS	35853	39740	.	+	0	ID=cds-WP_135369049.1;Parent=gene-C9E97_RS06175;Dbxref=GenBank:WP_135369049.1;Name=WP_135369049.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461500.1;locus_tag=C9E97_RS06175;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_135369049.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	40390	41820	.	+	.	ID=gene-C9E97_RS06180;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=C9E97_RS06180;old_locus_tag=C9E97_06325
NZ_PYKA01000044.1	Protein Homology	CDS	40390	41820	.	+	0	ID=cds-WP_001670672.1;Parent=gene-C9E97_RS06180;Dbxref=GenBank:WP_001670672.1;Name=WP_001670672.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001676035.1;locus_tag=C9E97_RS06180;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_001670672.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	41822	42586	.	+	.	ID=gene-C9E97_RS06185;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=C9E97_RS06185;old_locus_tag=C9E97_06330
NZ_PYKA01000044.1	Protein Homology	CDS	41822	42586	.	+	0	ID=cds-WP_135369556.1;Parent=gene-C9E97_RS06185;Dbxref=GenBank:WP_135369556.1;Name=WP_135369556.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461498.1;locus_tag=C9E97_RS06185;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_135369556.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	42586	43920	.	+	.	ID=gene-C9E97_RS06190;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=C9E97_RS06190;old_locus_tag=C9E97_06335
NZ_PYKA01000044.1	Protein Homology	CDS	42586	43920	.	+	0	ID=cds-WP_024131115.1;Parent=gene-C9E97_RS06190;Dbxref=GenBank:WP_024131115.1;Name=WP_024131115.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311447.1;locus_tag=C9E97_RS06190;product=two-component system response regulator GlrR;protein_id=WP_024131115.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	43997	44335	.	+	.	ID=gene-C9E97_RS06195;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=C9E97_RS06195;old_locus_tag=C9E97_06340
NZ_PYKA01000044.1	Protein Homology	CDS	43997	44335	.	+	0	ID=cds-WP_000717694.1;Parent=gene-C9E97_RS06195;Dbxref=GenBank:WP_000717694.1;Name=WP_000717694.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=C9E97_RS06195;product=nitrogen regulatory protein P-II;protein_id=WP_000717694.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	44384	45844	.	-	.	ID=gene-C9E97_RS06200;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=C9E97_RS06200;old_locus_tag=C9E97_06345
NZ_PYKA01000044.1	Protein Homology	CDS	44384	45844	.	-	0	ID=cds-WP_000856793.1;Parent=gene-C9E97_RS06200;Dbxref=GenBank:WP_000856793.1;Name=WP_000856793.1;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461495.1;locus_tag=C9E97_RS06200;product=dipeptide permease DtpD;protein_id=WP_000856793.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	45900	48044	.	-	.	ID=gene-C9E97_RS06205;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=C9E97_RS06205;old_locus_tag=C9E97_06350
NZ_PYKA01000044.1	Protein Homology	CDS	45900	48044	.	-	0	ID=cds-WP_001100652.1;Parent=gene-C9E97_RS06205;Dbxref=GenBank:WP_001100652.1;Name=WP_001100652.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461494.1;locus_tag=C9E97_RS06205;product=lysine decarboxylase CadA;protein_id=WP_001100652.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	48127	49458	.	-	.	ID=gene-C9E97_RS06210;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=C9E97_RS06210;old_locus_tag=C9E97_06355
NZ_PYKA01000044.1	Protein Homology	CDS	48127	49458	.	-	0	ID=cds-WP_000100008.1;Parent=gene-C9E97_RS06210;Dbxref=GenBank:WP_000100008.1;Name=WP_000100008.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461493.1;locus_tag=C9E97_RS06210;product=cadaverine/lysine antiporter;protein_id=WP_000100008.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	49819	51363	.	-	.	ID=gene-C9E97_RS06215;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=C9E97_RS06215;old_locus_tag=C9E97_06360
NZ_PYKA01000044.1	Protein Homology	CDS	49819	51363	.	-	0	ID=cds-WP_001187151.1;Parent=gene-C9E97_RS06215;Dbxref=GenBank:WP_001187151.1;Name=WP_001187151.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=cadC;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461492.1;locus_tag=C9E97_RS06215;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_001187151.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	51545	52735	.	-	.	ID=gene-C9E97_RS06220;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=C9E97_RS06220;old_locus_tag=C9E97_06365
NZ_PYKA01000044.1	Protein Homology	CDS	51545	52735	.	-	0	ID=cds-WP_000883151.1;Parent=gene-C9E97_RS06220;Dbxref=GenBank:WP_000883151.1;Name=WP_000883151.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461491.1;locus_tag=C9E97_RS06220;product=NO-inducible flavohemoprotein;protein_id=WP_000883151.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	53060	54313	.	+	.	ID=gene-C9E97_RS06225;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=C9E97_RS06225;old_locus_tag=C9E97_06370
NZ_PYKA01000044.1	Protein Homology	CDS	53060	54313	.	+	0	ID=cds-WP_000919178.1;Parent=gene-C9E97_RS06225;Dbxref=GenBank:WP_000919178.1;Name=WP_000919178.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=C9E97_RS06225;product=serine hydroxymethyltransferase;protein_id=WP_000919178.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	54509	55648	.	+	.	ID=gene-C9E97_RS06230;Name=C9E97_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06230;old_locus_tag=C9E97_06375
NZ_PYKA01000044.1	Protein Homology	CDS	54509	55648	.	+	0	ID=cds-WP_052944199.1;Parent=gene-C9E97_RS06230;Dbxref=GenBank:WP_052944199.1;Name=WP_052944199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461489.1;locus_tag=C9E97_RS06230;product=3-phenylpropionate MFS transporter;protein_id=WP_052944199.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	55643	56920	.	-	.	ID=gene-C9E97_RS06235;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=C9E97_RS06235;old_locus_tag=C9E97_06380
NZ_PYKA01000044.1	Protein Homology	CDS	55643	56920	.	-	0	ID=cds-WP_000982961.1;Parent=gene-C9E97_RS06235;Dbxref=GenBank:WP_000982961.1;Name=WP_000982961.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461488.1;locus_tag=C9E97_RS06235;product=stationary phase inducible protein CsiE;protein_id=WP_000982961.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	57046	57684	.	+	.	ID=gene-C9E97_RS06240;Name=C9E97_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06240;old_locus_tag=C9E97_06385
NZ_PYKA01000044.1	Protein Homology	CDS	57046	57684	.	+	0	ID=cds-WP_135369075.1;Parent=gene-C9E97_RS06240;Dbxref=GenBank:WP_135369075.1;Name=WP_135369075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461487.1;locus_tag=C9E97_RS06240;product=DUF1007 family protein;protein_id=WP_135369075.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	57675	58661	.	+	.	ID=gene-C9E97_RS06245;Name=C9E97_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06245;old_locus_tag=C9E97_06390
NZ_PYKA01000044.1	Protein Homology	CDS	57675	58661	.	+	0	ID=cds-WP_135369074.1;Parent=gene-C9E97_RS06245;Dbxref=GenBank:WP_135369074.1;Name=WP_135369074.1;Ontology_term=GO:0035444,GO:0015099,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=nickel cation transmembrane transport|0035444||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461486.1;locus_tag=C9E97_RS06245;product=nickel/cobalt transporter;protein_id=WP_135369074.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	58662	59675	.	-	.	ID=gene-C9E97_RS06250;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=protein_coding;locus_tag=C9E97_RS06250;old_locus_tag=C9E97_06395
NZ_PYKA01000044.1	Protein Homology	CDS	58662	59675	.	-	0	ID=cds-WP_000020685.1;Parent=gene-C9E97_RS06250;Dbxref=GenBank:WP_000020685.1;Name=WP_000020685.1;Ontology_term=GO:0006790,GO:0016002;gbkey=CDS;gene=asrC;go_function=sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461485.1;locus_tag=C9E97_RS06250;product=sulfite reductase subunit C;protein_id=WP_000020685.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	59686	60504	.	-	.	ID=gene-C9E97_RS06255;Name=asrB;gbkey=Gene;gene=asrB;gene_biotype=protein_coding;locus_tag=C9E97_RS06255;old_locus_tag=C9E97_06400
NZ_PYKA01000044.1	Protein Homology	CDS	59686	60504	.	-	0	ID=cds-WP_000017587.1;Parent=gene-C9E97_RS06255;Dbxref=GenBank:WP_000017587.1;Name=WP_000017587.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrB;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461484.1;locus_tag=C9E97_RS06255;product=anaerobic sulfite reductase subunit AsrB;protein_id=WP_000017587.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	60508	61551	.	-	.	ID=gene-C9E97_RS06260;Name=asrA;gbkey=Gene;gene=asrA;gene_biotype=protein_coding;locus_tag=C9E97_RS06260;old_locus_tag=C9E97_06405
NZ_PYKA01000044.1	Protein Homology	CDS	60508	61551	.	-	0	ID=cds-WP_000985205.1;Parent=gene-C9E97_RS06260;Dbxref=GenBank:WP_000985205.1;Name=WP_000985205.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrA;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461483.1;locus_tag=C9E97_RS06260;product=anaerobic sulfite reductase subunit AsrA;protein_id=WP_000985205.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	61733	62611	.	-	.	ID=gene-C9E97_RS06265;Name=C9E97_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06265;old_locus_tag=C9E97_06410
NZ_PYKA01000044.1	Protein Homology	CDS	61733	62611	.	-	0	ID=cds-WP_000174944.1;Parent=gene-C9E97_RS06265;Dbxref=GenBank:WP_000174944.1;Name=WP_000174944.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461482.1;locus_tag=C9E97_RS06265;product=alpha/beta hydrolase;protein_id=WP_000174944.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	62756	63559	.	-	.	ID=gene-C9E97_RS06270;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=C9E97_RS06270;old_locus_tag=C9E97_06415
NZ_PYKA01000044.1	Protein Homology	CDS	62756	63559	.	-	0	ID=cds-WP_000553467.1;Parent=gene-C9E97_RS06270;Dbxref=GenBank:WP_000553467.1;Name=WP_000553467.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=C9E97_RS06270;product=inositol-1-monophosphatase;protein_id=WP_000553467.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	63678	64409	.	+	.	ID=gene-C9E97_RS06275;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=C9E97_RS06275;old_locus_tag=C9E97_06420
NZ_PYKA01000044.1	Protein Homology	CDS	63678	64409	.	+	0	ID=cds-WP_000940032.1;Parent=gene-C9E97_RS06275;Dbxref=GenBank:WP_000940032.1;Name=WP_000940032.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461480.1;locus_tag=C9E97_RS06275;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_000940032.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	64569	65063	.	+	.	ID=gene-C9E97_RS06280;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=C9E97_RS06280;old_locus_tag=C9E97_06425
NZ_PYKA01000044.1	Protein Homology	CDS	64569	65063	.	+	0	ID=cds-WP_001241346.1;Parent=gene-C9E97_RS06280;Dbxref=GenBank:WP_001241346.1;Name=WP_001241346.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241352.1;locus_tag=C9E97_RS06280;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241346.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	65244	66458	.	+	.	ID=gene-C9E97_RS06285;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=C9E97_RS06285;old_locus_tag=C9E97_06430
NZ_PYKA01000044.1	Protein Homology	CDS	65244	66458	.	+	0	ID=cds-WP_000775263.1;Parent=gene-C9E97_RS06285;Dbxref=GenBank:WP_000775263.1;Name=WP_000775263.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=C9E97_RS06285;product=cysteine desulfurase;protein_id=WP_000775263.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	66486	66872	.	+	.	ID=gene-C9E97_RS06290;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=C9E97_RS06290;old_locus_tag=C9E97_06435
NZ_PYKA01000044.1	Protein Homology	CDS	66486	66872	.	+	0	ID=cds-WP_000331704.1;Parent=gene-C9E97_RS06290;Dbxref=GenBank:WP_000331704.1;Name=WP_000331704.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=C9E97_RS06290;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_000331704.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	66901	67224	.	+	.	ID=gene-C9E97_RS06295;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=C9E97_RS06295;old_locus_tag=C9E97_06440
NZ_PYKA01000044.1	Protein Homology	CDS	66901	67224	.	+	0	ID=cds-WP_000028952.1;Parent=gene-C9E97_RS06295;Dbxref=GenBank:WP_000028952.1;Name=WP_000028952.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461476.1;locus_tag=C9E97_RS06295;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_000028952.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	67420	67935	.	+	.	ID=gene-C9E97_RS06300;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=C9E97_RS06300;old_locus_tag=C9E97_06445
NZ_PYKA01000044.1	Protein Homology	CDS	67420	67935	.	+	0	ID=cds-WP_000384398.1;Parent=gene-C9E97_RS06300;Dbxref=GenBank:WP_000384398.1;Name=WP_000384398.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461475.1;locus_tag=C9E97_RS06300;product=co-chaperone HscB;protein_id=WP_000384398.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	67948	69798	.	+	.	ID=gene-C9E97_RS06305;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=C9E97_RS06305;old_locus_tag=C9E97_06450
NZ_PYKA01000044.1	Protein Homology	CDS	67948	69798	.	+	0	ID=cds-WP_135369305.1;Parent=gene-C9E97_RS06305;Dbxref=GenBank:WP_135369305.1;Name=WP_135369305.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=C9E97_RS06305;product=Fe-S protein assembly chaperone HscA;protein_id=WP_135369305.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	69800	70135	.	+	.	ID=gene-C9E97_RS06310;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=C9E97_RS06310;old_locus_tag=C9E97_06455
NZ_PYKA01000044.1	Protein Homology	CDS	69800	70135	.	+	0	ID=cds-WP_001124466.1;Parent=gene-C9E97_RS06310;Dbxref=GenBank:WP_001124466.1;Name=WP_001124466.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=C9E97_RS06310;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_001124466.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	70147	70347	.	+	.	ID=gene-C9E97_RS06315;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=C9E97_RS06315;old_locus_tag=C9E97_06460
NZ_PYKA01000044.1	Protein Homology	CDS	70147	70347	.	+	0	ID=cds-WP_000523621.1;Parent=gene-C9E97_RS06315;Dbxref=GenBank:WP_000523621.1;Name=WP_000523621.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=C9E97_RS06315;product=Fe-S cluster assembly protein IscX;protein_id=WP_000523621.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	70401	71684	.	+	.	ID=gene-C9E97_RS06320;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=C9E97_RS06320;old_locus_tag=C9E97_06465
NZ_PYKA01000044.1	Protein Homology	CDS	70401	71684	.	+	0	ID=cds-WP_000133541.1;Parent=gene-C9E97_RS06320;Dbxref=GenBank:WP_000133541.1;Name=WP_000133541.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461471.1;locus_tag=C9E97_RS06320;product=aminopeptidase PepB;protein_id=WP_000133541.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	71794	72570	.	+	.	ID=gene-C9E97_RS06325;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=C9E97_RS06325;old_locus_tag=C9E97_06475
NZ_PYKA01000044.1	Protein Homology	CDS	71794	72570	.	+	0	ID=cds-WP_001522413.1;Parent=gene-C9E97_RS06325;Dbxref=GenBank:WP_001522413.1;Name=WP_001522413.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311415.2;locus_tag=C9E97_RS06325;product=enhanced serine sensitivity protein SseB;protein_id=WP_001522413.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	72607	72723	.	-	.	ID=gene-C9E97_RS24040;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=C9E97_RS24040
NZ_PYKA01000044.1	Protein Homology	CDS	72607	72723	.	-	0	ID=cds-WP_350028759.1;Parent=gene-C9E97_RS24040;Dbxref=GenBank:WP_350028759.1;Name=WP_350028759.1;gbkey=CDS;gene=timP;inference=COORDINATES: protein motif:HMM:NF040796.1;locus_tag=C9E97_RS24040;product=small toxic inner membrane protein TimP;protein_id=WP_350028759.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	73139	73807	.	-	.	ID=gene-C9E97_RS06335;Name=C9E97_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06335;old_locus_tag=C9E97_06485
NZ_PYKA01000044.1	Protein Homology	CDS	73139	73807	.	-	0	ID=cds-WP_000355298.1;Parent=gene-C9E97_RS06335;Dbxref=GenBank:WP_000355298.1;Name=WP_000355298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461469.1;locus_tag=C9E97_RS06335;product=DUF5066 family protein;protein_id=WP_000355298.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	73850	74074	.	+	.	ID=gene-C9E97_RS23450;Name=C9E97_RS23450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23450
NZ_PYKA01000044.1	Protein Homology	CDS	73850	74074	.	+	0	ID=cds-WP_000851099.1;Parent=gene-C9E97_RS23450;Dbxref=GenBank:WP_000851099.1;Name=WP_000851099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344128.1;locus_tag=C9E97_RS23450;product=hypothetical protein;protein_id=WP_000851099.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	74054	74896	.	-	.	ID=gene-C9E97_RS06340;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=C9E97_RS06340;old_locus_tag=C9E97_06490
NZ_PYKA01000044.1	Protein Homology	CDS	74054	74896	.	-	0	ID=cds-WP_135369304.1;Parent=gene-C9E97_RS06340;Dbxref=GenBank:WP_135369304.1;Name=WP_135369304.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461468.1;locus_tag=C9E97_RS06340;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_135369304.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	75105	80039	.	+	.	ID=gene-C9E97_RS06345;Name=C9E97_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06345;old_locus_tag=C9E97_06495
NZ_PYKA01000044.1	Protein Homology	CDS	75105	80039	.	+	0	ID=cds-WP_135369303.1;Parent=gene-C9E97_RS06345;Dbxref=GenBank:WP_135369303.1;Name=WP_135369303.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461467.1;locus_tag=C9E97_RS06345;product=alpha-2-macroglobulin family protein;protein_id=WP_135369303.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	80040	82355	.	+	.	ID=gene-C9E97_RS06350;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=C9E97_RS06350;old_locus_tag=C9E97_06500
NZ_PYKA01000044.1	Protein Homology	CDS	80040	82355	.	+	0	ID=cds-WP_135420176.1;Parent=gene-C9E97_RS06350;Dbxref=GenBank:WP_135420176.1;Name=WP_135420176.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=C9E97_RS06350;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_135420176.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	82510	84888	.	+	.	ID=gene-C9E97_RS06355;Name=C9E97_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06355;old_locus_tag=C9E97_06505
NZ_PYKA01000044.1	Protein Homology	CDS	82510	84888	.	+	0	ID=cds-WP_348628781.1;Parent=gene-C9E97_RS06355;Dbxref=GenBank:WP_348628781.1;Name=WP_348628781.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664463.1;locus_tag=C9E97_RS06355;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_348628781.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	84885	85514	.	+	.	ID=gene-C9E97_RS06360;Name=C9E97_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06360;old_locus_tag=C9E97_06510
NZ_PYKA01000044.1	Protein Homology	CDS	84885	85514	.	+	0	ID=cds-WP_135369744.1;Parent=gene-C9E97_RS06360;Dbxref=GenBank:WP_135369744.1;Name=WP_135369744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461464.1;locus_tag=C9E97_RS06360;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_135369744.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	85507	86316	.	+	.	ID=gene-C9E97_RS06365;Name=C9E97_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06365;old_locus_tag=C9E97_06515
NZ_PYKA01000044.1	Protein Homology	CDS	85507	86316	.	+	0	ID=cds-WP_135369743.1;Parent=gene-C9E97_RS06365;Dbxref=GenBank:WP_135369743.1;Name=WP_135369743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461463.2;locus_tag=C9E97_RS06365;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_135369743.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	86316	87179	.	+	.	ID=gene-C9E97_RS06370;Name=C9E97_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06370;old_locus_tag=C9E97_06520
NZ_PYKA01000044.1	Protein Homology	CDS	86316	87179	.	+	0	ID=cds-WP_135369742.1;Parent=gene-C9E97_RS06370;Dbxref=GenBank:WP_135369742.1;Name=WP_135369742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461462.1;locus_tag=C9E97_RS06370;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_135369742.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	87300	87731	.	+	.	ID=gene-C9E97_RS06375;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=C9E97_RS06375;old_locus_tag=C9E97_06525
NZ_PYKA01000044.1	Protein Homology	CDS	87300	87731	.	+	0	ID=cds-WP_000963846.1;Parent=gene-C9E97_RS06375;Dbxref=GenBank:WP_000963846.1;Name=WP_000963846.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=C9E97_RS06375;product=nucleoside-diphosphate kinase;protein_id=WP_000963846.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	87937	89103	.	+	.	ID=gene-C9E97_RS06380;Name=C9E97_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06380;old_locus_tag=C9E97_06530
NZ_PYKA01000044.1	Protein Homology	CDS	87937	89103	.	+	0	ID=cds-WP_000003206.1;Parent=gene-C9E97_RS06380;Dbxref=GenBank:WP_000003206.1;Name=WP_000003206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461460.1;locus_tag=C9E97_RS06380;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_000003206.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	89395	90399	.	+	.	ID=gene-C9E97_RS06385;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=C9E97_RS06385;old_locus_tag=C9E97_06540
NZ_PYKA01000044.1	Protein Homology	CDS	89395	90399	.	+	0	ID=cds-WP_135369741.1;Parent=gene-C9E97_RS06385;Dbxref=GenBank:WP_135369741.1;Name=WP_135369741.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461459.1;locus_tag=C9E97_RS06385;product=cytoskeleton protein RodZ;protein_id=WP_135369741.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	90426	91544	.	+	.	ID=gene-C9E97_RS06390;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=C9E97_RS06390;old_locus_tag=C9E97_06545
NZ_PYKA01000044.1	Protein Homology	CDS	90426	91544	.	+	0	ID=cds-WP_000551804.1;Parent=gene-C9E97_RS06390;Dbxref=GenBank:WP_000551804.1;Name=WP_000551804.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461458.1;locus_tag=C9E97_RS06390;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_000551804.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	91655	92929	.	+	.	ID=gene-C9E97_RS06395;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=C9E97_RS06395;old_locus_tag=C9E97_06550
NZ_PYKA01000044.1	Protein Homology	CDS	91655	92929	.	+	0	ID=cds-WP_001107139.1;Parent=gene-C9E97_RS06395;Dbxref=GenBank:WP_001107139.1;Name=WP_001107139.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461457.1;locus_tag=C9E97_RS06395;product=histidine--tRNA ligase;protein_id=WP_001107139.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	92943	93563	.	+	.	ID=gene-C9E97_RS06400;Name=C9E97_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06400;old_locus_tag=C9E97_06555
NZ_PYKA01000044.1	Protein Homology	CDS	92943	93563	.	+	0	ID=cds-WP_000409190.1;Parent=gene-C9E97_RS06400;Dbxref=GenBank:WP_000409190.1;Name=WP_000409190.1;Ontology_term=GO:0005515,GO:0044877;gbkey=CDS;go_function=protein binding|0005515||IEA,protein-containing complex binding|0044877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461456.1;locus_tag=C9E97_RS06400;product=YfgM family protein;protein_id=WP_000409190.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	93574	94752	.	+	.	ID=gene-C9E97_RS06405;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=C9E97_RS06405;old_locus_tag=C9E97_06560
NZ_PYKA01000044.1	Protein Homology	CDS	93574	94752	.	+	0	ID=cds-WP_135369740.1;Parent=gene-C9E97_RS06405;Dbxref=GenBank:WP_135369740.1;Name=WP_135369740.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461455.1;locus_tag=C9E97_RS06405;product=outer membrane protein assembly factor BamB;protein_id=WP_135369740.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	94869	96341	.	+	.	ID=gene-C9E97_RS06410;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=C9E97_RS06410;old_locus_tag=C9E97_06565
NZ_PYKA01000044.1	Protein Homology	CDS	94869	96341	.	+	0	ID=cds-WP_050068376.1;Parent=gene-C9E97_RS06410;Dbxref=GenBank:WP_050068376.1;Name=WP_050068376.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=C9E97_RS06410;product=ribosome biogenesis GTPase Der;protein_id=WP_050068376.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	96430	96651	.	+	.	ID=gene-C9E97_RS06415;Name=C9E97_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06415;old_locus_tag=C9E97_06570
NZ_PYKA01000044.1	Protein Homology	CDS	96430	96651	.	+	0	ID=cds-WP_000406465.1;Parent=gene-C9E97_RS06415;Dbxref=GenBank:WP_000406465.1;Name=WP_000406465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461453.1;locus_tag=C9E97_RS06415;product=zinc ribbon domain-containing protein;protein_id=WP_000406465.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	96997	99189	.	+	.	ID=gene-C9E97_RS06420;Name=sinH;gbkey=Gene;gene=sinH;gene_biotype=protein_coding;locus_tag=C9E97_RS06420;old_locus_tag=C9E97_06575
NZ_PYKA01000044.1	Protein Homology	CDS	96997	99189	.	+	0	ID=cds-WP_135369315.1;Parent=gene-C9E97_RS06420;Dbxref=GenBank:WP_135369315.1;Name=WP_135369315.1;gbkey=CDS;gene=sinH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=C9E97_RS06420;product=intimin-like inverse autotransporter SinH;protein_id=WP_135369315.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	99247	100212	.	+	.	ID=gene-C9E97_RS06425;Name=C9E97_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06425;old_locus_tag=C9E97_06580
NZ_PYKA01000044.1	Protein Homology	CDS	99247	100212	.	+	0	ID=cds-WP_135369314.1;Parent=gene-C9E97_RS06425;Dbxref=GenBank:WP_135369314.1;Name=WP_135369314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461451.1;locus_tag=C9E97_RS06425;product=SinI family autotransporter-associated protein;protein_id=WP_135369314.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	gene	100332	105932	.	+	.	ID=gene-C9E97_RS06430;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=C9E97_RS06430;old_locus_tag=C9E97_06585
NZ_PYKA01000044.1	Protein Homology	CDS	100332	105932	.	+	0	ID=cds-WP_135369313.1;Parent=gene-C9E97_RS06430;Dbxref=GenBank:WP_135369313.1;Name=WP_135369313.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461450.1;locus_tag=C9E97_RS06430;product=DUF823/DUF824 repeat adhesin RatA;protein_id=WP_135369313.1;transl_table=11
NZ_PYKA01000044.1	RefSeq	pseudogene	106091	106309	.	+	.	ID=gene-C9E97_RS06435;Name=C9E97_RS06435;end_range=106309,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS06435;old_locus_tag=C9E97_06590;partial=true;pseudo=true
NZ_PYKA01000044.1	Protein Homology	CDS	106091	106309	.	+	0	ID=cds-C9E97_RS06435;Parent=gene-C9E97_RS06435;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=106309,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=C9E97_RS06435;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PYKA01000140.1 1 12745
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000140.1	RefSeq	region	1	12745	.	+	.	ID=NZ_PYKA01000140.1:1..12745;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000140.1	RefSeq	pseudogene	1	193	.	-	.	ID=gene-C9E97_RS23365;Name=C9E97_RS23365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23365;old_locus_tag=C9E97_23905;partial=true;pseudo=true;start_range=.,1
NZ_PYKA01000140.1	Protein Homology	CDS	1	193	.	-	0	ID=cds-C9E97_RS23365;Parent=gene-C9E97_RS23365;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463024.1;locus_tag=C9E97_RS23365;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKA01000140.1	RefSeq	gene	235	4458	.	-	.	ID=gene-C9E97_RS23370;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=C9E97_RS23370;old_locus_tag=C9E97_23910
NZ_PYKA01000140.1	Protein Homology	CDS	235	4458	.	-	0	ID=cds-WP_000653965.1;Parent=gene-C9E97_RS23370;Dbxref=GenBank:WP_000653965.1;Name=WP_000653965.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463023.1;locus_tag=C9E97_RS23370;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_000653965.1;transl_table=11
NZ_PYKA01000140.1	RefSeq	gene	4535	8563	.	-	.	ID=gene-C9E97_RS23375;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=C9E97_RS23375;old_locus_tag=C9E97_23915
NZ_PYKA01000140.1	Protein Homology	CDS	4535	8563	.	-	0	ID=cds-WP_000263105.1;Parent=gene-C9E97_RS23375;Dbxref=GenBank:WP_000263105.1;Name=WP_000263105.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=C9E97_RS23375;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_000263105.1;transl_table=11
NZ_PYKA01000140.1	RefSeq	gene	8881	9246	.	-	.	ID=gene-C9E97_RS23380;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=C9E97_RS23380;old_locus_tag=C9E97_23920
NZ_PYKA01000140.1	Protein Homology	CDS	8881	9246	.	-	0	ID=cds-WP_000028882.1;Parent=gene-C9E97_RS23380;Dbxref=GenBank:WP_000028882.1;Name=WP_000028882.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=C9E97_RS23380;product=50S ribosomal protein L7/L12;protein_id=WP_000028882.1;transl_table=11
NZ_PYKA01000140.1	RefSeq	gene	9313	9810	.	-	.	ID=gene-C9E97_RS23385;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=C9E97_RS23385;old_locus_tag=C9E97_23925
NZ_PYKA01000140.1	Protein Homology	CDS	9313	9810	.	-	0	ID=cds-WP_001207203.1;Parent=gene-C9E97_RS23385;Dbxref=GenBank:WP_001207203.1;Name=WP_001207203.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=C9E97_RS23385;product=50S ribosomal protein L10;protein_id=WP_001207203.1;transl_table=11
NZ_PYKA01000140.1	RefSeq	gene	10230	10934	.	-	.	ID=gene-C9E97_RS23390;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=C9E97_RS23390;old_locus_tag=C9E97_23935
NZ_PYKA01000140.1	Protein Homology	CDS	10230	10934	.	-	0	ID=cds-WP_001096676.1;Parent=gene-C9E97_RS23390;Dbxref=GenBank:WP_001096676.1;Name=WP_001096676.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463019.1;locus_tag=C9E97_RS23390;product=50S ribosomal protein L1;protein_id=WP_001096676.1;transl_table=11
NZ_PYKA01000140.1	RefSeq	gene	10938	11366	.	-	.	ID=gene-C9E97_RS23395;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=C9E97_RS23395;old_locus_tag=C9E97_23940
NZ_PYKA01000140.1	Protein Homology	CDS	10938	11366	.	-	0	ID=cds-WP_001085926.1;Parent=gene-C9E97_RS23395;Dbxref=GenBank:WP_001085926.1;Name=WP_001085926.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=C9E97_RS23395;product=50S ribosomal protein L11;protein_id=WP_001085926.1;transl_table=11
NZ_PYKA01000140.1	RefSeq	gene	11524	12069	.	-	.	ID=gene-C9E97_RS23400;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=C9E97_RS23400;old_locus_tag=C9E97_23945
NZ_PYKA01000140.1	Protein Homology	CDS	11524	12069	.	-	0	ID=cds-WP_001287521.1;Parent=gene-C9E97_RS23400;Dbxref=GenBank:WP_001287521.1;Name=WP_001287521.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=C9E97_RS23400;product=transcription termination/antitermination protein NusG;protein_id=WP_001287521.1;transl_table=11
NZ_PYKA01000140.1	RefSeq	gene	12071	12454	.	-	.	ID=gene-C9E97_RS23405;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=C9E97_RS23405;old_locus_tag=C9E97_23950
NZ_PYKA01000140.1	Protein Homology	CDS	12071	12454	.	-	0	ID=cds-WP_001275691.1;Parent=gene-C9E97_RS23405;Dbxref=GenBank:WP_001275691.1;Name=WP_001275691.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=C9E97_RS23405;product=preprotein translocase subunit SecE;protein_id=WP_001275691.1;transl_table=11
##sequence-region NZ_PYKA01000029.1 1 12346
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000029.1	RefSeq	region	1	12346	.	+	.	ID=NZ_PYKA01000029.1:1..12346;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000029.1	RefSeq	gene	318	2594	.	+	.	ID=gene-C9E97_RS03600;Name=phsA;gbkey=Gene;gene=phsA;gene_biotype=protein_coding;locus_tag=C9E97_RS03600;old_locus_tag=C9E97_03710
NZ_PYKA01000029.1	Protein Homology	CDS	318	2594	.	+	0	ID=cds-WP_076937135.1;Parent=gene-C9E97_RS03600;Dbxref=GenBank:WP_076937135.1;Name=WP_076937135.1;Ontology_term=GO:0016491,GO:0043546,GO:0051539;gbkey=CDS;gene=phsA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461010.1;locus_tag=C9E97_RS03600;product=thiosulfate reductase PhsA;protein_id=WP_076937135.1;transl_table=11
NZ_PYKA01000029.1	RefSeq	gene	2609	3187	.	+	.	ID=gene-C9E97_RS03605;Name=phsB;gbkey=Gene;gene=phsB;gene_biotype=protein_coding;locus_tag=C9E97_RS03605;old_locus_tag=C9E97_03715
NZ_PYKA01000029.1	Protein Homology	CDS	2609	3187	.	+	0	ID=cds-WP_001016236.1;Parent=gene-C9E97_RS03605;Dbxref=GenBank:WP_001016236.1;Name=WP_001016236.1;gbkey=CDS;gene=phsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461009.1;locus_tag=C9E97_RS03605;product=thiosulfate reductase electron transport protein PhsB;protein_id=WP_001016236.1;transl_table=11
NZ_PYKA01000029.1	RefSeq	gene	3184	3948	.	+	.	ID=gene-C9E97_RS03610;Name=phsC;gbkey=Gene;gene=phsC;gene_biotype=protein_coding;locus_tag=C9E97_RS03610;old_locus_tag=C9E97_03720
NZ_PYKA01000029.1	Protein Homology	CDS	3184	3948	.	+	0	ID=cds-WP_001092553.1;Parent=gene-C9E97_RS03610;Dbxref=GenBank:WP_001092553.1;Name=WP_001092553.1;gbkey=CDS;gene=phsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461008.1;locus_tag=C9E97_RS03610;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_001092553.1;transl_table=11
NZ_PYKA01000029.1	RefSeq	gene	4072	5244	.	+	.	ID=gene-C9E97_RS03615;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=C9E97_RS03615;old_locus_tag=C9E97_03725
NZ_PYKA01000029.1	Protein Homology	CDS	4072	5244	.	+	0	ID=cds-WP_000925044.1;Parent=gene-C9E97_RS03615;Dbxref=GenBank:WP_000925044.1;Name=WP_000925044.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=C9E97_RS03615;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_000925044.1;transl_table=11
NZ_PYKA01000029.1	RefSeq	gene	5395	5862	.	+	.	ID=gene-C9E97_RS03620;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=C9E97_RS03620;old_locus_tag=C9E97_03730
NZ_PYKA01000029.1	Protein Homology	CDS	5395	5862	.	+	0	ID=cds-WP_000384326.1;Parent=gene-C9E97_RS03620;Dbxref=GenBank:WP_000384326.1;Name=WP_000384326.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461006.1;locus_tag=C9E97_RS03620;product=DNA gyrase inhibitor SbmC;protein_id=WP_000384326.1;transl_table=11
NZ_PYKA01000029.1	RefSeq	gene	5981	7039	.	+	.	ID=gene-C9E97_RS03625;Name=C9E97_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03625;old_locus_tag=C9E97_03735
NZ_PYKA01000029.1	Protein Homology	CDS	5981	7039	.	+	0	ID=cds-WP_001200854.1;Parent=gene-C9E97_RS03625;Dbxref=GenBank:WP_001200854.1;Name=WP_001200854.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461005.1;locus_tag=C9E97_RS03625;product=FUSC family protein;protein_id=WP_001200854.1;transl_table=11
NZ_PYKA01000029.1	RefSeq	gene	7284	7619	.	+	.	ID=gene-C9E97_RS03630;Name=C9E97_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS03630;old_locus_tag=C9E97_03740
NZ_PYKA01000029.1	Protein Homology	CDS	7284	7619	.	+	0	ID=cds-WP_000450405.1;Parent=gene-C9E97_RS03630;Dbxref=GenBank:WP_000450405.1;Name=WP_000450405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461004.1;locus_tag=C9E97_RS03630;product=DUF496 family protein;protein_id=WP_000450405.1;transl_table=11
NZ_PYKA01000029.1	RefSeq	gene	7653	8519	.	-	.	ID=gene-C9E97_RS03635;Name=pduX;gbkey=Gene;gene=pduX;gene_biotype=protein_coding;locus_tag=C9E97_RS03635;old_locus_tag=C9E97_03745
NZ_PYKA01000029.1	Protein Homology	CDS	7653	8519	.	-	0	ID=cds-WP_001808089.1;Parent=gene-C9E97_RS03635;Dbxref=GenBank:WP_001808089.1;Name=WP_001808089.1;gbkey=CDS;gene=pduX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632997.1;locus_tag=C9E97_RS03635;product=L-threonine kinase PduX;protein_id=WP_001808089.1;transl_table=11
NZ_PYKA01000029.1	RefSeq	gene	8613	9827	.	-	.	ID=gene-C9E97_RS03640;Name=pduW;gbkey=Gene;gene=pduW;gene_biotype=protein_coding;locus_tag=C9E97_RS03640;old_locus_tag=C9E97_03750
NZ_PYKA01000029.1	Protein Homology	CDS	8613	9827	.	-	0	ID=cds-WP_000120647.1;Parent=gene-C9E97_RS03640;Dbxref=GenBank:WP_000120647.1;Name=WP_000120647.1;gbkey=CDS;gene=pduW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=C9E97_RS03640;product=propanediol utilization propionate kinase PduW;protein_id=WP_000120647.1;transl_table=11
NZ_PYKA01000029.1	RefSeq	gene	9812	10264	.	-	.	ID=gene-C9E97_RS03645;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=C9E97_RS03645;old_locus_tag=C9E97_03755
NZ_PYKA01000029.1	Protein Homology	CDS	9812	10264	.	-	0	ID=cds-WP_023201213.1;Parent=gene-C9E97_RS03645;Dbxref=GenBank:WP_023201213.1;Name=WP_023201213.1;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461001.1;locus_tag=C9E97_RS03645;product=propanediol utilization protein PduV;protein_id=WP_023201213.1;transl_table=11
NZ_PYKA01000029.1	RefSeq	gene	10269	10619	.	-	.	ID=gene-C9E97_RS03650;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=C9E97_RS03650;old_locus_tag=C9E97_03760
NZ_PYKA01000029.1	Protein Homology	CDS	10269	10619	.	-	0	ID=cds-WP_000441103.1;Parent=gene-C9E97_RS03650;Dbxref=GenBank:WP_000441103.1;Name=WP_000441103.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461000.1;locus_tag=C9E97_RS03650;product=propanediol utilization microcompartment protein PduU;protein_id=WP_000441103.1;transl_table=11
NZ_PYKA01000029.1	RefSeq	gene	10619	11173	.	-	.	ID=gene-C9E97_RS03655;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=C9E97_RS03655;old_locus_tag=C9E97_03765
NZ_PYKA01000029.1	Protein Homology	CDS	10619	11173	.	-	0	ID=cds-WP_000075772.1;Parent=gene-C9E97_RS03655;Dbxref=GenBank:WP_000075772.1;Name=WP_000075772.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=C9E97_RS03655;product=propanediol utilization microcompartment protein PduT;protein_id=WP_000075772.1;transl_table=11
NZ_PYKA01000029.1	RefSeq	gene	11176	12346	.	-	.	ID=gene-C9E97_RS03660;Name=pduS;end_range=12346,.;gbkey=Gene;gene=pduS;gene_biotype=protein_coding;locus_tag=C9E97_RS03660;old_locus_tag=C9E97_03770;partial=true
NZ_PYKA01000029.1	Protein Homology	CDS	11176	12346	.	-	1	ID=cds-WP_135495698.1;Parent=gene-C9E97_RS03660;Dbxref=GenBank:WP_135495698.1;Name=WP_135495698.1;end_range=12346,.;gbkey=CDS;gene=pduS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=C9E97_RS03660;partial=true;product=cobalamin reductase PduS;protein_id=WP_135495698.1;transl_table=11
##sequence-region NZ_PYKA01000134.1 1 12337
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000134.1	RefSeq	region	1	12337	.	+	.	ID=NZ_PYKA01000134.1:1..12337;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000134.1	RefSeq	pseudogene	1	267	.	-	.	ID=gene-C9E97_RS22050;Name=C9E97_RS22050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS22050;old_locus_tag=C9E97_22580;partial=true;pseudo=true;start_range=.,1
NZ_PYKA01000134.1	Protein Homology	CDS	1	267	.	-	0	ID=cds-C9E97_RS22050;Parent=gene-C9E97_RS22050;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=C9E97_RS22050;partial=true;product=electron transport complex protein RnfC;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKA01000134.1	RefSeq	gene	264	1376	.	-	.	ID=gene-C9E97_RS22055;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=C9E97_RS22055;old_locus_tag=C9E97_22585
NZ_PYKA01000134.1	Protein Homology	CDS	264	1376	.	-	0	ID=cds-WP_001091455.1;Parent=gene-C9E97_RS22055;Dbxref=GenBank:WP_001091455.1;Name=WP_001091455.1;gbkey=CDS;gene=pduQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460997.1;locus_tag=C9E97_RS22055;product=1-propanol dehydrogenase PduQ;protein_id=WP_001091455.1;transl_table=11
NZ_PYKA01000134.1	RefSeq	gene	1388	2782	.	-	.	ID=gene-C9E97_RS22060;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=C9E97_RS22060;old_locus_tag=C9E97_22590
NZ_PYKA01000134.1	Protein Homology	CDS	1388	2782	.	-	0	ID=cds-WP_023137998.1;Parent=gene-C9E97_RS22060;Dbxref=GenBank:WP_023137998.1;Name=WP_023137998.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460996.1;locus_tag=C9E97_RS22060;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=WP_023137998.1;transl_table=11
NZ_PYKA01000134.1	RefSeq	gene	2779	3789	.	-	.	ID=gene-C9E97_RS22065;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=protein_coding;locus_tag=C9E97_RS22065;old_locus_tag=C9E97_22595
NZ_PYKA01000134.1	Protein Homology	CDS	2779	3789	.	-	0	ID=cds-WP_001029486.1;Parent=gene-C9E97_RS22065;Dbxref=GenBank:WP_001029486.1;Name=WP_001029486.1;gbkey=CDS;gene=pduO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460995.1;locus_tag=C9E97_RS22065;product=two-domain cob(I)yrinic acid a%2Cc-diamide adenosyltransferase PduO;protein_id=WP_001029486.1;transl_table=11
NZ_PYKA01000134.1	RefSeq	gene	3799	4074	.	-	.	ID=gene-C9E97_RS22070;Name=pduN;gbkey=Gene;gene=pduN;gene_biotype=protein_coding;locus_tag=C9E97_RS22070;old_locus_tag=C9E97_22600
NZ_PYKA01000134.1	Protein Homology	CDS	3799	4074	.	-	0	ID=cds-WP_000549825.1;Parent=gene-C9E97_RS22070;Dbxref=GenBank:WP_000549825.1;Name=WP_000549825.1;gbkey=CDS;gene=pduN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228577.1;locus_tag=C9E97_RS22070;product=propanediol utilization microcompartment protein PduN;protein_id=WP_000549825.1;transl_table=11
NZ_PYKA01000134.1	RefSeq	gene	4078	4569	.	-	.	ID=gene-C9E97_RS22075;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=C9E97_RS22075;old_locus_tag=C9E97_22605
NZ_PYKA01000134.1	Protein Homology	CDS	4078	4569	.	-	0	ID=cds-WP_058214707.1;Parent=gene-C9E97_RS22075;Dbxref=GenBank:WP_058214707.1;Name=WP_058214707.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460993.1;locus_tag=C9E97_RS22075;product=propanediol utilization microcompartment protein PduM;protein_id=WP_058214707.1;transl_table=11
NZ_PYKA01000134.1	RefSeq	gene	4566	5198	.	-	.	ID=gene-C9E97_RS22080;Name=C9E97_RS22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22080;old_locus_tag=C9E97_22610
NZ_PYKA01000134.1	Protein Homology	CDS	4566	5198	.	-	0	ID=cds-WP_000356732.1;Parent=gene-C9E97_RS22080;Dbxref=GenBank:WP_000356732.1;Name=WP_000356732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460992.1;locus_tag=C9E97_RS22080;product=phosphate propanoyltransferase;protein_id=WP_000356732.1;transl_table=11
NZ_PYKA01000134.1	RefSeq	gene	5198	5680	.	-	.	ID=gene-C9E97_RS22085;Name=pduK;gbkey=Gene;gene=pduK;gene_biotype=protein_coding;locus_tag=C9E97_RS22085;old_locus_tag=C9E97_22615
NZ_PYKA01000134.1	Protein Homology	CDS	5198	5680	.	-	0	ID=cds-WP_078054881.1;Parent=gene-C9E97_RS22085;Dbxref=GenBank:WP_078054881.1;Name=WP_078054881.1;gbkey=CDS;gene=pduK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460991.3;locus_tag=C9E97_RS22085;product=propanediol utilization microcompartment protein PduK;protein_id=WP_078054881.1;transl_table=11
NZ_PYKA01000134.1	RefSeq	gene	5684	5959	.	-	.	ID=gene-C9E97_RS22090;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=C9E97_RS22090;old_locus_tag=C9E97_22620
NZ_PYKA01000134.1	Protein Homology	CDS	5684	5959	.	-	0	ID=cds-WP_001057755.1;Parent=gene-C9E97_RS22090;Dbxref=GenBank:WP_001057755.1;Name=WP_001057755.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460990.1;locus_tag=C9E97_RS22090;product=propanediol utilization microcompartment protein PduJ;protein_id=WP_001057755.1;transl_table=11
NZ_PYKA01000134.1	RefSeq	gene	5978	6328	.	-	.	ID=gene-C9E97_RS22095;Name=pduH;gbkey=Gene;gene=pduH;gene_biotype=protein_coding;locus_tag=C9E97_RS22095;old_locus_tag=C9E97_22625
NZ_PYKA01000134.1	Protein Homology	CDS	5978	6328	.	-	0	ID=cds-WP_000377965.1;Parent=gene-C9E97_RS22095;Dbxref=GenBank:WP_000377965.1;Name=WP_000377965.1;gbkey=CDS;gene=pduH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460989.1;locus_tag=C9E97_RS22095;product=propanediol dehydratase reactivase beta subunit PduH;protein_id=WP_000377965.1;transl_table=11
NZ_PYKA01000134.1	RefSeq	gene	6318	8150	.	-	.	ID=gene-C9E97_RS22100;Name=pduG;gbkey=Gene;gene=pduG;gene_biotype=protein_coding;locus_tag=C9E97_RS22100;old_locus_tag=C9E97_22630
NZ_PYKA01000134.1	Protein Homology	CDS	6318	8150	.	-	0	ID=cds-WP_023202810.1;Parent=gene-C9E97_RS22100;Dbxref=GenBank:WP_023202810.1;Name=WP_023202810.1;gbkey=CDS;gene=pduG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=C9E97_RS22100;product=propanediol dehydratase reactivase alpha subunit PduG;protein_id=WP_023202810.1;transl_table=11
NZ_PYKA01000134.1	RefSeq	gene	8166	8687	.	-	.	ID=gene-C9E97_RS22105;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=C9E97_RS22105;old_locus_tag=C9E97_22635
NZ_PYKA01000134.1	Protein Homology	CDS	8166	8687	.	-	0	ID=cds-WP_001090600.1;Parent=gene-C9E97_RS22105;Dbxref=GenBank:WP_001090600.1;Name=WP_001090600.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460987.1;locus_tag=C9E97_RS22105;product=propanediol dehydratase small subunit PduE;protein_id=WP_001090600.1;transl_table=11
NZ_PYKA01000134.1	RefSeq	gene	8702	9376	.	-	.	ID=gene-C9E97_RS22110;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=C9E97_RS22110;old_locus_tag=C9E97_22640
NZ_PYKA01000134.1	Protein Homology	CDS	8702	9376	.	-	0	ID=cds-WP_000405049.1;Parent=gene-C9E97_RS22110;Dbxref=GenBank:WP_000405049.1;Name=WP_000405049.1;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460986.1;locus_tag=C9E97_RS22110;product=propanediol dehydratase medium subunit PduD;protein_id=WP_000405049.1;transl_table=11
NZ_PYKA01000134.1	RefSeq	gene	9387	11051	.	-	.	ID=gene-C9E97_RS22115;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=C9E97_RS22115;old_locus_tag=C9E97_22645
NZ_PYKA01000134.1	Protein Homology	CDS	9387	11051	.	-	0	ID=cds-WP_001256896.1;Parent=gene-C9E97_RS22115;Dbxref=GenBank:WP_001256896.1;Name=WP_001256896.1;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460985.1;locus_tag=C9E97_RS22115;product=propanediol dehydratase large subunit PduC;protein_id=WP_001256896.1;transl_table=11
NZ_PYKA01000134.1	RefSeq	gene	11070	11882	.	-	.	ID=gene-C9E97_RS22120;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=C9E97_RS22120;old_locus_tag=C9E97_22650
NZ_PYKA01000134.1	Protein Homology	CDS	11070	11882	.	-	0	ID=cds-WP_000097500.1;Parent=gene-C9E97_RS22120;Dbxref=GenBank:WP_000097500.1;Name=WP_000097500.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=pduB;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228567.1;locus_tag=C9E97_RS22120;product=propanediol utilization microcompartment protein PduB;protein_id=WP_000097500.1;transl_table=11
NZ_PYKA01000134.1	RefSeq	gene	11879	12163	.	-	.	ID=gene-C9E97_RS22125;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=C9E97_RS22125;old_locus_tag=C9E97_22655
NZ_PYKA01000134.1	Protein Homology	CDS	11879	12163	.	-	0	ID=cds-WP_001183618.1;Parent=gene-C9E97_RS22125;Dbxref=GenBank:WP_001183618.1;Name=WP_001183618.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460983.1;locus_tag=C9E97_RS22125;product=propanediol utilization microcompartment protein PduA;protein_id=WP_001183618.1;transl_table=11
##sequence-region NZ_PYKA01000075.1 1 12203
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000075.1	RefSeq	region	1	12203	.	+	.	ID=NZ_PYKA01000075.1:1..12203;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000075.1	RefSeq	gene	118	1098	.	-	.	ID=gene-C9E97_RS10765;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=C9E97_RS10765;old_locus_tag=C9E97_11010
NZ_PYKA01000075.1	Protein Homology	CDS	118	1098	.	-	0	ID=cds-WP_000874176.1;Parent=gene-C9E97_RS10765;Dbxref=GenBank:WP_000874176.1;Name=WP_000874176.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461964.1;locus_tag=C9E97_RS10765;product=tRNA-modifying protein YgfZ;protein_id=WP_000874176.1;transl_table=11
NZ_PYKA01000075.1	RefSeq	gene	1348	1614	.	+	.	ID=gene-C9E97_RS10775;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=C9E97_RS10775;old_locus_tag=C9E97_11020
NZ_PYKA01000075.1	Protein Homology	CDS	1348	1614	.	+	0	ID=cds-WP_000351186.1;Parent=gene-C9E97_RS10775;Dbxref=GenBank:WP_000351186.1;Name=WP_000351186.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=C9E97_RS10775;product=FAD assembly factor SdhE;protein_id=WP_000351186.1;transl_table=11
NZ_PYKA01000075.1	RefSeq	gene	1595	2008	.	+	.	ID=gene-C9E97_RS10780;Name=C9E97_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10780;old_locus_tag=C9E97_11025
NZ_PYKA01000075.1	Protein Homology	CDS	1595	2008	.	+	0	ID=cds-WP_000244756.1;Parent=gene-C9E97_RS10780;Dbxref=GenBank:WP_000244756.1;Name=WP_000244756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461962.1;locus_tag=C9E97_RS10780;product=protein YgfX;protein_id=WP_000244756.1;transl_table=11
NZ_PYKA01000075.1	RefSeq	gene	2061	2582	.	-	.	ID=gene-C9E97_RS10785;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=C9E97_RS10785;old_locus_tag=C9E97_11030
NZ_PYKA01000075.1	Protein Homology	CDS	2061	2582	.	-	0	ID=cds-WP_001055885.1;Parent=gene-C9E97_RS10785;Dbxref=GenBank:WP_001055885.1;Name=WP_001055885.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461961.1;locus_tag=C9E97_RS10785;product=flavodoxin FldB;protein_id=WP_001055885.1;transl_table=11
NZ_PYKA01000075.1	RefSeq	gene	2695	3591	.	+	.	ID=gene-C9E97_RS10790;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=C9E97_RS10790;old_locus_tag=C9E97_11035
NZ_PYKA01000075.1	Protein Homology	CDS	2695	3591	.	+	0	ID=cds-WP_000434302.1;Parent=gene-C9E97_RS10790;Dbxref=GenBank:WP_000434302.1;Name=WP_000434302.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461960.1;locus_tag=C9E97_RS10790;product=site-specific tyrosine recombinase XerD;protein_id=WP_000434302.1;transl_table=11
NZ_PYKA01000075.1	RefSeq	gene	3615	4328	.	+	.	ID=gene-C9E97_RS10795;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=C9E97_RS10795;old_locus_tag=C9E97_11040
NZ_PYKA01000075.1	Protein Homology	CDS	3615	4328	.	+	0	ID=cds-WP_000745614.1;Parent=gene-C9E97_RS10795;Dbxref=GenBank:WP_000745614.1;Name=WP_000745614.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461959.1;locus_tag=C9E97_RS10795;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_000745614.1;transl_table=11
NZ_PYKA01000075.1	RefSeq	gene	4334	6067	.	+	.	ID=gene-C9E97_RS10800;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=C9E97_RS10800;old_locus_tag=C9E97_11045
NZ_PYKA01000075.1	Protein Homology	CDS	4334	6067	.	+	0	ID=cds-WP_000813392.1;Parent=gene-C9E97_RS10800;Dbxref=GenBank:WP_000813392.1;Name=WP_000813392.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461958.1;locus_tag=C9E97_RS10800;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_000813392.1;transl_table=11
NZ_PYKA01000075.1	RefSeq	gene	6172	7270	.	+	.	ID=gene-C9E97_RS10805;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=C9E97_RS10805;old_locus_tag=C9E97_11050
NZ_PYKA01000075.1	Protein Homology	CDS	6172	6246	.	+	0	ID=cds-WP_096059418.1;Parent=gene-C9E97_RS10805;Dbxref=GenBank:WP_096059418.1;Name=WP_096059418.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=C9E97_RS10805;product=peptide chain release factor 2;protein_id=WP_096059418.1;transl_table=11
NZ_PYKA01000075.1	Protein Homology	CDS	6248	7270	.	+	0	ID=cds-WP_096059418.1;Parent=gene-C9E97_RS10805;Dbxref=GenBank:WP_096059418.1;Name=WP_096059418.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=C9E97_RS10805;product=peptide chain release factor 2;protein_id=WP_096059418.1;transl_table=11
NZ_PYKA01000075.1	RefSeq	gene	7280	8797	.	+	.	ID=gene-C9E97_RS10810;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=C9E97_RS10810;old_locus_tag=C9E97_11055
NZ_PYKA01000075.1	Protein Homology	CDS	7280	8797	.	+	0	ID=cds-WP_000003339.1;Parent=gene-C9E97_RS10810;Dbxref=GenBank:WP_000003339.1;Name=WP_000003339.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=C9E97_RS10810;product=lysine--tRNA ligase;protein_id=WP_000003339.1;transl_table=11
NZ_PYKA01000075.1	RefSeq	gene	8873	9418	.	-	.	ID=gene-C9E97_RS10815;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=C9E97_RS10815;old_locus_tag=C9E97_11060
NZ_PYKA01000075.1	Protein Homology	CDS	8873	9418	.	-	0	ID=cds-WP_000134000.1;Parent=gene-C9E97_RS10815;Dbxref=GenBank:WP_000134000.1;Name=WP_000134000.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461955.1;locus_tag=C9E97_RS10815;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_000134000.1;transl_table=11
NZ_PYKA01000075.1	RefSeq	gene	9683	10441	.	+	.	ID=gene-C9E97_RS10820;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=C9E97_RS10820;old_locus_tag=C9E97_11070
NZ_PYKA01000075.1	Protein Homology	CDS	9683	10441	.	+	0	ID=cds-WP_000244328.1;Parent=gene-C9E97_RS10820;Dbxref=GenBank:WP_000244328.1;Name=WP_000244328.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461954.1;locus_tag=C9E97_RS10820;product=amidase activator ActS;protein_id=WP_000244328.1;transl_table=11
NZ_PYKA01000075.1	RefSeq	gene	10521	10594	.	+	.	ID=gene-C9E97_RS10825;Name=C9E97_RS10825;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS10825;old_locus_tag=C9E97_11075
NZ_PYKA01000075.1	tRNAscan-SE	tRNA	10521	10594	.	+	.	ID=rna-C9E97_RS10825;Parent=gene-C9E97_RS10825;anticodon=(pos:10553..10555);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS10825;product=tRNA-Gly
NZ_PYKA01000075.1	tRNAscan-SE	exon	10521	10594	.	+	.	ID=exon-C9E97_RS10825-1;Parent=rna-C9E97_RS10825;anticodon=(pos:10553..10555);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS10825;product=tRNA-Gly
NZ_PYKA01000075.1	RefSeq	gene	10687	10899	.	-	.	ID=gene-C9E97_RS10830;Name=C9E97_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10830;old_locus_tag=C9E97_11080
NZ_PYKA01000075.1	Protein Homology	CDS	10687	10899	.	-	0	ID=cds-WP_063808845.1;Parent=gene-C9E97_RS10830;Dbxref=GenBank:WP_063808845.1;Name=WP_063808845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449411.1;locus_tag=C9E97_RS10830;product=hypothetical protein;protein_id=WP_063808845.1;transl_table=11
NZ_PYKA01000075.1	RefSeq	gene	11108	11335	.	+	.	ID=gene-C9E97_RS10835;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=C9E97_RS10835;old_locus_tag=C9E97_11085
NZ_PYKA01000075.1	Protein Homology	CDS	11108	11335	.	+	0	ID=cds-WP_000557545.1;Parent=gene-C9E97_RS10835;Dbxref=GenBank:WP_000557545.1;Name=WP_000557545.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461951.1;locus_tag=C9E97_RS10835;product=toxin-antitoxin system antitoxin VapB;protein_id=WP_000557545.1;transl_table=11
NZ_PYKA01000075.1	RefSeq	gene	11335	11733	.	+	.	ID=gene-C9E97_RS10840;Name=vapC;gbkey=Gene;gene=vapC;gene_biotype=protein_coding;locus_tag=C9E97_RS10840;old_locus_tag=C9E97_11090
NZ_PYKA01000075.1	Protein Homology	CDS	11335	11733	.	+	0	ID=cds-WP_000911337.1;Parent=gene-C9E97_RS10840;Dbxref=GenBank:WP_000911337.1;Name=WP_000911337.1;gbkey=CDS;gene=vapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461950.1;locus_tag=C9E97_RS10840;product=tRNA(fMet)-specific endonuclease VapC;protein_id=WP_000911337.1;transl_table=11
##sequence-region NZ_PYKA01000060.1 1 12110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000060.1	RefSeq	region	1	12110	.	+	.	ID=NZ_PYKA01000060.1:1..12110;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000060.1	RefSeq	gene	393	1427	.	+	.	ID=gene-C9E97_RS09095;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=C9E97_RS09095;old_locus_tag=C9E97_09285
NZ_PYKA01000060.1	Protein Homology	CDS	393	1427	.	+	0	ID=cds-WP_000063533.1;Parent=gene-C9E97_RS09095;Dbxref=GenBank:WP_000063533.1;Name=WP_000063533.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=C9E97_RS09095;product=L-rhamnose/proton symporter RhaT;protein_id=WP_000063533.1;transl_table=11
NZ_PYKA01000060.1	RefSeq	gene	1424	2272	.	-	.	ID=gene-C9E97_RS09100;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=C9E97_RS09100;old_locus_tag=C9E97_09290
NZ_PYKA01000060.1	Protein Homology	CDS	1424	2272	.	-	0	ID=cds-WP_000013292.1;Parent=gene-C9E97_RS09100;Dbxref=GenBank:WP_000013292.1;Name=WP_000013292.1;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462930.1;locus_tag=C9E97_RS09100;product=HTH-type transcriptional activator RhaR;protein_id=WP_000013292.1;transl_table=11
NZ_PYKA01000060.1	RefSeq	gene	2425	3261	.	-	.	ID=gene-C9E97_RS09105;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=C9E97_RS09105;old_locus_tag=C9E97_09295
NZ_PYKA01000060.1	Protein Homology	CDS	2425	3261	.	-	0	ID=cds-WP_000217108.1;Parent=gene-C9E97_RS09105;Dbxref=GenBank:WP_000217108.1;Name=WP_000217108.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462929.1;locus_tag=C9E97_RS09105;product=HTH-type transcriptional activator RhaS;protein_id=WP_000217108.1;transl_table=11
NZ_PYKA01000060.1	RefSeq	gene	3549	5018	.	+	.	ID=gene-C9E97_RS09110;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=C9E97_RS09110;old_locus_tag=C9E97_09300
NZ_PYKA01000060.1	Protein Homology	CDS	3549	5018	.	+	0	ID=cds-WP_061375796.1;Parent=gene-C9E97_RS09110;Dbxref=GenBank:WP_061375796.1;Name=WP_061375796.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462928.1;locus_tag=C9E97_RS09110;product=rhamnulokinase;protein_id=WP_061375796.1;transl_table=11
NZ_PYKA01000060.1	RefSeq	gene	5015	6274	.	+	.	ID=gene-C9E97_RS09115;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=C9E97_RS09115;old_locus_tag=C9E97_09305
NZ_PYKA01000060.1	Protein Homology	CDS	5015	6274	.	+	0	ID=cds-WP_000211471.1;Parent=gene-C9E97_RS09115;Dbxref=GenBank:WP_000211471.1;Name=WP_000211471.1;Ontology_term=GO:0019299,GO:0008740,GO:0030145;gbkey=CDS;gene=rhaA;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462927.1;locus_tag=C9E97_RS09115;product=L-rhamnose isomerase;protein_id=WP_000211471.1;transl_table=11
NZ_PYKA01000060.1	RefSeq	gene	6417	7244	.	+	.	ID=gene-C9E97_RS09120;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=C9E97_RS09120;old_locus_tag=C9E97_09310
NZ_PYKA01000060.1	Protein Homology	CDS	6417	7244	.	+	0	ID=cds-WP_001179685.1;Parent=gene-C9E97_RS09120;Dbxref=GenBank:WP_001179685.1;Name=WP_001179685.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462926.1;locus_tag=C9E97_RS09120;product=rhamnulose-1-phosphate aldolase;protein_id=WP_001179685.1;transl_table=11
NZ_PYKA01000060.1	RefSeq	gene	7371	8519	.	+	.	ID=gene-C9E97_RS09125;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=C9E97_RS09125;old_locus_tag=C9E97_09315
NZ_PYKA01000060.1	Protein Homology	CDS	7371	8519	.	+	0	ID=cds-WP_000009253.1;Parent=gene-C9E97_RS09125;Dbxref=GenBank:WP_000009253.1;Name=WP_000009253.1;Ontology_term=GO:0008912;gbkey=CDS;gene=fucO;go_function=lactaldehyde reductase activity|0008912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462925.1;locus_tag=C9E97_RS09125;product=lactaldehyde reductase;protein_id=WP_000009253.1;transl_table=11
NZ_PYKA01000060.1	RefSeq	gene	8516	8830	.	+	.	ID=gene-C9E97_RS09130;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=C9E97_RS09130;old_locus_tag=C9E97_09320
NZ_PYKA01000060.1	Protein Homology	CDS	8516	8830	.	+	0	ID=cds-WP_000619477.1;Parent=gene-C9E97_RS09130;Dbxref=GenBank:WP_000619477.1;Name=WP_000619477.1;Ontology_term=GO:0019299,GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462924.1;locus_tag=C9E97_RS09130;product=L-rhamnose mutarotase;protein_id=WP_000619477.1;transl_table=11
NZ_PYKA01000060.1	RefSeq	gene	8919	9467	.	-	.	ID=gene-C9E97_RS09135;Name=C9E97_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09135;old_locus_tag=C9E97_09325
NZ_PYKA01000060.1	Protein Homology	CDS	8919	9467	.	-	0	ID=cds-WP_001517951.1;Parent=gene-C9E97_RS09135;Dbxref=GenBank:WP_001517951.1;Name=WP_001517951.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1;locus_tag=C9E97_RS09135;product=helix-turn-helix domain-containing protein;protein_id=WP_001517951.1;transl_table=11
NZ_PYKA01000060.1	RefSeq	gene	9568	10227	.	+	.	ID=gene-C9E97_RS09140;Name=C9E97_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09140;old_locus_tag=C9E97_09330
NZ_PYKA01000060.1	Protein Homology	CDS	9568	10227	.	+	0	ID=cds-WP_000683586.1;Parent=gene-C9E97_RS09140;Dbxref=GenBank:WP_000683586.1;Name=WP_000683586.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462922.1;locus_tag=C9E97_RS09140;product=AzlC family ABC transporter permease;protein_id=WP_000683586.1;transl_table=11
NZ_PYKA01000060.1	RefSeq	gene	10227	10550	.	+	.	ID=gene-C9E97_RS09145;Name=C9E97_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09145;old_locus_tag=C9E97_09335
NZ_PYKA01000060.1	Protein Homology	CDS	10227	10550	.	+	0	ID=cds-WP_000527676.1;Parent=gene-C9E97_RS09145;Dbxref=GenBank:WP_000527676.1;Name=WP_000527676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=C9E97_RS09145;product=AzlD domain-containing protein;protein_id=WP_000527676.1;transl_table=11
NZ_PYKA01000060.1	RefSeq	gene	10905	12005	.	-	.	ID=gene-C9E97_RS09150;Name=C9E97_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS09150;old_locus_tag=C9E97_09340
NZ_PYKA01000060.1	Protein Homology	CDS	10905	12005	.	-	0	ID=cds-WP_000828048.1;Parent=gene-C9E97_RS09150;Dbxref=GenBank:WP_000828048.1;Name=WP_000828048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828052.1;locus_tag=C9E97_RS09150;product=YiiG family protein;protein_id=WP_000828048.1;transl_table=11
##sequence-region NZ_PYKA01000052.1 1 11260
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000052.1	RefSeq	region	1	11260	.	+	.	ID=NZ_PYKA01000052.1:1..11260;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000052.1	RefSeq	pseudogene	1	158	.	+	.	ID=gene-C9E97_RS23685;Name=C9E97_RS23685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23685;partial=true;pseudo=true;start_range=.,1
NZ_PYKA01000052.1	Protein Homology	CDS	1	158	.	+	2	ID=cds-C9E97_RS23685;Parent=gene-C9E97_RS23685;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453693.1;locus_tag=C9E97_RS23685;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKA01000052.1	RefSeq	gene	174	1679	.	+	.	ID=gene-C9E97_RS07120;Name=iolA;gbkey=Gene;gene=iolA;gene_biotype=protein_coding;locus_tag=C9E97_RS07120;old_locus_tag=C9E97_07295
NZ_PYKA01000052.1	Protein Homology	CDS	174	1679	.	+	0	ID=cds-WP_000450729.1;Parent=gene-C9E97_RS07120;Dbxref=GenBank:WP_000450729.1;Name=WP_000450729.1;gbkey=CDS;gene=iolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463282.1;locus_tag=C9E97_RS07120;product=malonate-semialdehyde dehydrogenase IolA;protein_id=WP_000450729.1;transl_table=11
NZ_PYKA01000052.1	RefSeq	gene	1704	2513	.	+	.	ID=gene-C9E97_RS07125;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=protein_coding;locus_tag=C9E97_RS07125;old_locus_tag=C9E97_07300
NZ_PYKA01000052.1	Protein Homology	CDS	1704	2513	.	+	0	ID=cds-WP_000002010.1;Parent=gene-C9E97_RS07125;Dbxref=GenBank:WP_000002010.1;Name=WP_000002010.1;Ontology_term=GO:0019310,GO:0016861;gbkey=CDS;gene=iolB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463281.1;locus_tag=C9E97_RS07125;product=5-deoxy-glucuronate isomerase;protein_id=WP_000002010.1;transl_table=11
NZ_PYKA01000052.1	RefSeq	gene	2853	4289	.	-	.	ID=gene-C9E97_RS07130;Name=iolT2;gbkey=Gene;gene=iolT2;gene_biotype=protein_coding;locus_tag=C9E97_RS07130;old_locus_tag=C9E97_07305
NZ_PYKA01000052.1	Protein Homology	CDS	2853	4289	.	-	0	ID=cds-WP_000083108.1;Parent=gene-C9E97_RS07130;Dbxref=GenBank:WP_000083108.1;Name=WP_000083108.1;gbkey=CDS;gene=iolT2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463280.1;locus_tag=C9E97_RS07130;product=myo-inositol import MFS transporter IolT2;protein_id=WP_000083108.1;transl_table=11
NZ_PYKA01000052.1	RefSeq	gene	4748	6181	.	+	.	ID=gene-C9E97_RS07140;Name=iolT1;gbkey=Gene;gene=iolT1;gene_biotype=protein_coding;locus_tag=C9E97_RS07140;old_locus_tag=C9E97_07315
NZ_PYKA01000052.1	Protein Homology	CDS	4748	6181	.	+	0	ID=cds-WP_000107710.1;Parent=gene-C9E97_RS07140;Dbxref=GenBank:WP_000107710.1;Name=WP_000107710.1;gbkey=CDS;gene=iolT1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463279.1;locus_tag=C9E97_RS07140;product=myo-inositol import MFS transporter IolT1;protein_id=WP_000107710.1;transl_table=11
NZ_PYKA01000052.1	RefSeq	gene	6232	7065	.	-	.	ID=gene-C9E97_RS07145;Name=iolR;gbkey=Gene;gene=iolR;gene_biotype=protein_coding;locus_tag=C9E97_RS07145;old_locus_tag=C9E97_07320
NZ_PYKA01000052.1	Protein Homology	CDS	6232	7065	.	-	0	ID=cds-WP_000033840.1;Parent=gene-C9E97_RS07145;Dbxref=GenBank:WP_000033840.1;Name=WP_000033840.1;gbkey=CDS;gene=iolR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463278.1;locus_tag=C9E97_RS07145;product=myo-inositol utilization transcriptional regulator IolR;protein_id=WP_000033840.1;transl_table=11
NZ_PYKA01000052.1	RefSeq	gene	7556	8935	.	-	.	ID=gene-C9E97_RS07155;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=C9E97_RS07155;old_locus_tag=C9E97_07330
NZ_PYKA01000052.1	Protein Homology	CDS	7556	8935	.	-	0	ID=cds-WP_001219833.1;Parent=gene-C9E97_RS07155;Dbxref=GenBank:WP_001219833.1;Name=WP_001219833.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463277.1;locus_tag=C9E97_RS07155;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_001219833.1;transl_table=11
NZ_PYKA01000052.1	RefSeq	gene	9110	10108	.	+	.	ID=gene-C9E97_RS07160;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=C9E97_RS07160;old_locus_tag=C9E97_07335
NZ_PYKA01000052.1	Protein Homology	CDS	9110	10108	.	+	0	ID=cds-WP_000853764.1;Parent=gene-C9E97_RS07160;Dbxref=GenBank:WP_000853764.1;Name=WP_000853764.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=C9E97_RS07160;product=class 1 fructose-bisphosphatase;protein_id=WP_000853764.1;transl_table=11
NZ_PYKA01000052.1	RefSeq	gene	10335	10865	.	+	.	ID=gene-C9E97_RS07165;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=C9E97_RS07165;old_locus_tag=C9E97_07340
NZ_PYKA01000052.1	Protein Homology	CDS	10335	10865	.	+	0	ID=cds-WP_000055079.1;Parent=gene-C9E97_RS07165;Dbxref=GenBank:WP_000055079.1;Name=WP_000055079.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=C9E97_RS07165;product=inorganic diphosphatase;protein_id=WP_000055079.1;transl_table=11
##sequence-region NZ_PYKA01000114.1 1 11216
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000114.1	RefSeq	region	1	11216	.	+	.	ID=NZ_PYKA01000114.1:1..11216;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000114.1	RefSeq	gene	97	172	.	+	.	ID=gene-C9E97_RS17210;Name=C9E97_RS17210;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS17210;old_locus_tag=C9E97_17575
NZ_PYKA01000114.1	tRNAscan-SE	tRNA	97	172	.	+	.	ID=rna-C9E97_RS17210;Parent=gene-C9E97_RS17210;anticodon=(pos:130..132);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS17210;product=tRNA-Ala
NZ_PYKA01000114.1	tRNAscan-SE	exon	97	172	.	+	.	ID=exon-C9E97_RS17210-1;Parent=rna-C9E97_RS17210;anticodon=(pos:130..132);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS17210;product=tRNA-Ala
NZ_PYKA01000114.1	RefSeq	gene	363	2552	.	+	.	ID=gene-C9E97_RS17215;Name=C9E97_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17215;old_locus_tag=C9E97_17580
NZ_PYKA01000114.1	Protein Homology	CDS	363	2552	.	+	0	ID=cds-WP_001112947.1;Parent=gene-C9E97_RS17215;Dbxref=GenBank:WP_001112947.1;Name=WP_001112947.1;Ontology_term=GO:0000160,GO:0007165,GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461351.1;locus_tag=C9E97_RS17215;product=EAL domain-containing protein;protein_id=WP_001112947.1;transl_table=11
NZ_PYKA01000114.1	RefSeq	gene	2605	3807	.	-	.	ID=gene-C9E97_RS17220;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=C9E97_RS17220;old_locus_tag=C9E97_17585
NZ_PYKA01000114.1	Protein Homology	CDS	2605	3807	.	-	0	ID=cds-WP_000376347.1;Parent=gene-C9E97_RS17220;Dbxref=GenBank:WP_000376347.1;Name=WP_000376347.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461350.1;locus_tag=C9E97_RS17220;product=nucleoside permease NupC;protein_id=WP_000376347.1;transl_table=11
NZ_PYKA01000114.1	RefSeq	gene	4113	4157	.	+	.	ID=gene-C9E97_RS24090;Name=C9E97_RS24090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS24090
NZ_PYKA01000114.1	Protein Homology	CDS	4113	4157	.	+	0	ID=cds-WP_418338175.1;Parent=gene-C9E97_RS24090;Dbxref=GenBank:WP_418338175.1;Name=WP_418338175.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049535.1;locus_tag=C9E97_RS24090;product=hypothetical protein;protein_id=WP_418338175.1;transl_table=11
NZ_PYKA01000114.1	RefSeq	gene	4150	5391	.	+	.	ID=gene-C9E97_RS17225;Name=C9E97_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17225;old_locus_tag=C9E97_17590
NZ_PYKA01000114.1	Protein Homology	CDS	4150	5391	.	+	0	ID=cds-WP_000131734.1;Parent=gene-C9E97_RS17225;Dbxref=GenBank:WP_000131734.1;Name=WP_000131734.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461349.1;locus_tag=C9E97_RS17225;product=Nramp family divalent metal transporter;protein_id=WP_000131734.1;transl_table=11
NZ_PYKA01000114.1	RefSeq	gene	5452	5778	.	-	.	ID=gene-C9E97_RS17230;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=C9E97_RS17230;old_locus_tag=C9E97_17595
NZ_PYKA01000114.1	Protein Homology	CDS	5452	5778	.	-	0	ID=cds-WP_135369210.1;Parent=gene-C9E97_RS17230;Dbxref=GenBank:WP_135369210.1;Name=WP_135369210.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461348.1;locus_tag=C9E97_RS17230;product=DUF2502 domain-containing protein YpeC;protein_id=WP_135369210.1;transl_table=11
NZ_PYKA01000114.1	RefSeq	gene	5892	6890	.	-	.	ID=gene-C9E97_RS17235;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=C9E97_RS17235;old_locus_tag=C9E97_17600
NZ_PYKA01000114.1	Protein Homology	CDS	5892	6890	.	-	0	ID=cds-WP_135369209.1;Parent=gene-C9E97_RS17235;Dbxref=GenBank:WP_135369209.1;Name=WP_135369209.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461347.1;locus_tag=C9E97_RS17235;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_135369209.1;transl_table=11
NZ_PYKA01000114.1	RefSeq	gene	7070	8722	.	+	.	ID=gene-C9E97_RS17245;Name=C9E97_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17245;old_locus_tag=C9E97_17610
NZ_PYKA01000114.1	Protein Homology	CDS	7070	8722	.	+	0	ID=cds-WP_135369208.1;Parent=gene-C9E97_RS17245;Dbxref=GenBank:WP_135369208.1;Name=WP_135369208.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461346.1;locus_tag=C9E97_RS17245;product=alpha-keto acid decarboxylase family protein;protein_id=WP_135369208.1;transl_table=11
NZ_PYKA01000114.1	RefSeq	gene	8742	9977	.	-	.	ID=gene-C9E97_RS17250;Name=C9E97_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS17250;old_locus_tag=C9E97_17615
NZ_PYKA01000114.1	Protein Homology	CDS	8742	9977	.	-	0	ID=cds-WP_000468920.1;Parent=gene-C9E97_RS17250;Dbxref=GenBank:WP_000468920.1;Name=WP_000468920.1;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461345.1;locus_tag=C9E97_RS17250;product=ion channel protein;protein_id=WP_000468920.1;transl_table=11
NZ_PYKA01000114.1	RefSeq	gene	10181	11146	.	+	.	ID=gene-C9E97_RS17255;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=C9E97_RS17255;old_locus_tag=C9E97_17620
NZ_PYKA01000114.1	Protein Homology	CDS	10181	11146	.	+	0	ID=cds-WP_135369207.1;Parent=gene-C9E97_RS17255;Dbxref=GenBank:WP_135369207.1;Name=WP_135369207.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461344.1;locus_tag=C9E97_RS17255;product=glucokinase;protein_id=WP_135369207.1;transl_table=11
##sequence-region NZ_PYKA01000045.1 1 10414
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000045.1	RefSeq	region	1	10414	.	+	.	ID=NZ_PYKA01000045.1:1..10414;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000045.1	RefSeq	gene	1	153	.	+	.	ID=gene-C9E97_RS06440;Name=C9E97_RS06440;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E97_RS06440;old_locus_tag=C9E97_06595;partial=true;start_range=.,1
NZ_PYKA01000045.1	cmsearch	ncRNA	1	153	.	+	.	ID=rna-C9E97_RS06440;Parent=gene-C9E97_RS06440;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS06440;partial=true;product=RtT sRNA;start_range=.,1
NZ_PYKA01000045.1	cmsearch	exon	1	153	.	+	.	ID=exon-C9E97_RS06440-1;Parent=rna-C9E97_RS06440;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS06440;partial=true;product=RtT sRNA;start_range=.,1
NZ_PYKA01000045.1	RefSeq	gene	188	263	.	+	.	ID=gene-C9E97_RS06445;Name=C9E97_RS06445;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS06445;old_locus_tag=C9E97_06600
NZ_PYKA01000045.1	tRNAscan-SE	tRNA	188	263	.	+	.	ID=rna-C9E97_RS06445;Parent=gene-C9E97_RS06445;anticodon=(pos:221..223);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS06445;product=tRNA-Lys
NZ_PYKA01000045.1	tRNAscan-SE	exon	188	263	.	+	.	ID=exon-C9E97_RS06445-1;Parent=rna-C9E97_RS06445;anticodon=(pos:221..223);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS06445;product=tRNA-Lys
NZ_PYKA01000045.1	RefSeq	gene	712	1755	.	+	.	ID=gene-C9E97_RS06450;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=C9E97_RS06450;old_locus_tag=C9E97_06610
NZ_PYKA01000045.1	Protein Homology	CDS	712	1755	.	+	0	ID=cds-WP_135369336.1;Parent=gene-C9E97_RS06450;Dbxref=GenBank:WP_135369336.1;Name=WP_135369336.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=C9E97_RS06450;product=quinolinate synthase NadA;protein_id=WP_135369336.1;transl_table=11
NZ_PYKA01000045.1	RefSeq	gene	1780	2499	.	+	.	ID=gene-C9E97_RS06455;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=C9E97_RS06455;old_locus_tag=C9E97_06615
NZ_PYKA01000045.1	Protein Homology	CDS	1780	2499	.	+	0	ID=cds-WP_000345361.1;Parent=gene-C9E97_RS06455;Dbxref=GenBank:WP_000345361.1;Name=WP_000345361.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459737.1;locus_tag=C9E97_RS06455;product=nicotinamide riboside transporter PnuC;protein_id=WP_000345361.1;transl_table=11
NZ_PYKA01000045.1	RefSeq	gene	2496	3434	.	-	.	ID=gene-C9E97_RS06460;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=C9E97_RS06460;old_locus_tag=C9E97_06620
NZ_PYKA01000045.1	Protein Homology	CDS	2496	3434	.	-	0	ID=cds-WP_000951250.1;Parent=gene-C9E97_RS06460;Dbxref=GenBank:WP_000951250.1;Name=WP_000951250.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459738.1;locus_tag=C9E97_RS06460;product=CDF family zinc transporter ZitB;protein_id=WP_000951250.1;transl_table=11
NZ_PYKA01000045.1	RefSeq	gene	3545	3931	.	-	.	ID=gene-C9E97_RS06465;Name=C9E97_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06465;old_locus_tag=C9E97_06625
NZ_PYKA01000045.1	Protein Homology	CDS	3545	3931	.	-	0	ID=cds-WP_080193232.1;Parent=gene-C9E97_RS06465;Dbxref=GenBank:WP_080193232.1;Name=WP_080193232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459739.1;locus_tag=C9E97_RS06465;product=YbgS-like family protein;protein_id=WP_080193232.1;transl_table=11
NZ_PYKA01000045.1	RefSeq	gene	4251	5303	.	+	.	ID=gene-C9E97_RS06470;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=C9E97_RS06470;old_locus_tag=C9E97_06630
NZ_PYKA01000045.1	Protein Homology	CDS	4251	5303	.	+	0	ID=cds-WP_001109233.1;Parent=gene-C9E97_RS06470;Dbxref=GenBank:WP_001109233.1;Name=WP_001109233.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=C9E97_RS06470;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_001109233.1;transl_table=11
NZ_PYKA01000045.1	RefSeq	gene	5397	5942	.	-	.	ID=gene-C9E97_RS06475;Name=C9E97_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06475;old_locus_tag=C9E97_06635
NZ_PYKA01000045.1	Protein Homology	CDS	5397	5942	.	-	0	ID=cds-WP_000970374.1;Parent=gene-C9E97_RS06475;Dbxref=GenBank:WP_000970374.1;Name=WP_000970374.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459741.1;locus_tag=C9E97_RS06475;product=FumA C-terminus/TtdB family hydratase beta subunit;protein_id=WP_000970374.1;transl_table=11
NZ_PYKA01000045.1	RefSeq	gene	5957	6802	.	-	.	ID=gene-C9E97_RS06480;Name=C9E97_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06480;old_locus_tag=C9E97_06640
NZ_PYKA01000045.1	Protein Homology	CDS	5957	6802	.	-	0	ID=cds-WP_000086831.1;Parent=gene-C9E97_RS06480;Dbxref=GenBank:WP_000086831.1;Name=WP_000086831.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459742.1;locus_tag=C9E97_RS06480;product=fumarate hydratase;protein_id=WP_000086831.1;transl_table=11
NZ_PYKA01000045.1	RefSeq	gene	6932	7822	.	+	.	ID=gene-C9E97_RS06485;Name=C9E97_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06485;old_locus_tag=C9E97_06645
NZ_PYKA01000045.1	Protein Homology	CDS	6932	7822	.	+	0	ID=cds-WP_000405927.1;Parent=gene-C9E97_RS06485;Dbxref=GenBank:WP_000405927.1;Name=WP_000405927.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539513.1;locus_tag=C9E97_RS06485;product=LysR family transcriptional regulator;protein_id=WP_000405927.1;transl_table=11
NZ_PYKA01000045.1	RefSeq	gene	7823	8806	.	-	.	ID=gene-C9E97_RS06490;Name=C9E97_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06490;old_locus_tag=C9E97_06650
NZ_PYKA01000045.1	Protein Homology	CDS	7823	8806	.	-	0	ID=cds-WP_000282119.1;Parent=gene-C9E97_RS06490;Dbxref=GenBank:WP_000282119.1;Name=WP_000282119.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459744.1;locus_tag=C9E97_RS06490;product=LysR family transcriptional regulator;protein_id=WP_000282119.1;transl_table=11
NZ_PYKA01000045.1	RefSeq	gene	9029	10297	.	+	.	ID=gene-C9E97_RS06495;Name=C9E97_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS06495;old_locus_tag=C9E97_06655
NZ_PYKA01000045.1	Protein Homology	CDS	9029	10297	.	+	0	ID=cds-WP_023193244.1;Parent=gene-C9E97_RS06495;Dbxref=GenBank:WP_023193244.1;Name=WP_023193244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074132.1;locus_tag=C9E97_RS06495;product=SLC13 family permease;protein_id=WP_023193244.1;transl_table=11
NZ_PYKA01000045.1	RefSeq	pseudogene	10347	10414	.	+	.	ID=gene-C9E97_RS06500;Name=C9E97_RS06500;end_range=10414,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS06500;old_locus_tag=C9E97_06660;partial=true;pseudo=true
NZ_PYKA01000045.1	Protein Homology	CDS	10347	10414	.	+	0	ID=cds-C9E97_RS06500;Parent=gene-C9E97_RS06500;Note=catalyzes the decarboxylation of oxaloacetate to form pyruvate and carbon dioxide%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=10414,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459746.1;locus_tag=C9E97_RS06500;partial=true;product=oxaloacetate decarboxylase subunit gamma;pseudo=true;transl_table=11
##sequence-region NZ_PYKA01000103.1 1 10138
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000103.1	RefSeq	region	1	10138	.	+	.	ID=NZ_PYKA01000103.1:1..10138;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000103.1	RefSeq	gene	221	1078	.	+	.	ID=gene-C9E97_RS13890;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=C9E97_RS13890;old_locus_tag=C9E97_14190
NZ_PYKA01000103.1	Protein Homology	CDS	221	1078	.	+	0	ID=cds-WP_000642539.1;Parent=gene-C9E97_RS13890;Dbxref=GenBank:WP_000642539.1;Name=WP_000642539.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459949.1;locus_tag=C9E97_RS13890;product=formate transporter FocA;protein_id=WP_000642539.1;transl_table=11
NZ_PYKA01000103.1	RefSeq	gene	1138	3420	.	+	.	ID=gene-C9E97_RS13895;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=C9E97_RS13895;old_locus_tag=C9E97_14195
NZ_PYKA01000103.1	Protein Homology	CDS	1138	3420	.	+	0	ID=cds-WP_001292799.1;Parent=gene-C9E97_RS13895;Dbxref=GenBank:WP_001292799.1;Name=WP_001292799.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=C9E97_RS13895;product=formate C-acetyltransferase;protein_id=WP_001292799.1;transl_table=11
NZ_PYKA01000103.1	RefSeq	gene	3492	4445	.	-	.	ID=gene-C9E97_RS13900;Name=sopD2;gbkey=Gene;gene=sopD2;gene_biotype=protein_coding;locus_tag=C9E97_RS13900;old_locus_tag=C9E97_14200
NZ_PYKA01000103.1	Protein Homology	CDS	3492	4445	.	-	0	ID=cds-WP_135369409.1;Parent=gene-C9E97_RS13900;Dbxref=GenBank:WP_135369409.1;Name=WP_135369409.1;gbkey=CDS;gene=sopD2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001145575.1;locus_tag=C9E97_RS13900;product=type III secretion system effector SopD2;protein_id=WP_135369409.1;transl_table=11
NZ_PYKA01000103.1	RefSeq	pseudogene	4576	4901	.	+	.	ID=gene-C9E97_RS23815;Name=C9E97_RS23815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23815;pseudo=true
NZ_PYKA01000103.1	Protein Homology	CDS	4576	4901	.	+	0	ID=cds-C9E97_RS23815;Parent=gene-C9E97_RS23815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459946.1;locus_tag=C9E97_RS23815;product=cytoplasmic protein;pseudo=true;transl_table=11
NZ_PYKA01000103.1	RefSeq	gene	5020	5817	.	+	.	ID=gene-C9E97_RS13905;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=C9E97_RS13905;old_locus_tag=C9E97_14205
NZ_PYKA01000103.1	Protein Homology	CDS	5020	5817	.	+	0	ID=cds-WP_000067928.1;Parent=gene-C9E97_RS13905;Dbxref=GenBank:WP_000067928.1;Name=WP_000067928.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015696619.1;locus_tag=C9E97_RS13905;product=pyruvate formate lyase 1-activating protein;protein_id=WP_000067928.1;transl_table=11
NZ_PYKA01000103.1	RefSeq	gene	6110	7531	.	-	.	ID=gene-C9E97_RS13910;Name=C9E97_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13910;old_locus_tag=C9E97_14210
NZ_PYKA01000103.1	Protein Homology	CDS	6110	7531	.	-	0	ID=cds-WP_135369408.1;Parent=gene-C9E97_RS13910;Dbxref=GenBank:WP_135369408.1;Name=WP_135369408.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459944.1;locus_tag=C9E97_RS13910;product=APC family permease;protein_id=WP_135369408.1;transl_table=11
NZ_PYKA01000103.1	RefSeq	gene	7749	8897	.	-	.	ID=gene-C9E97_RS13915;Name=C9E97_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13915;old_locus_tag=C9E97_14215
NZ_PYKA01000103.1	Protein Homology	CDS	7749	8897	.	-	0	ID=cds-WP_000109274.1;Parent=gene-C9E97_RS13915;Dbxref=GenBank:WP_000109274.1;Name=WP_000109274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459943.1;locus_tag=C9E97_RS13915;product=MFS transporter;protein_id=WP_000109274.1;transl_table=11
NZ_PYKA01000103.1	RefSeq	gene	9247	10110	.	-	.	ID=gene-C9E97_RS13920;Name=C9E97_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13920;old_locus_tag=C9E97_14220
NZ_PYKA01000103.1	Protein Homology	CDS	9247	10110	.	-	0	ID=cds-WP_000534681.1;Parent=gene-C9E97_RS13920;Dbxref=GenBank:WP_000534681.1;Name=WP_000534681.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459942.1;locus_tag=C9E97_RS13920;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000534681.1;transl_table=11
##sequence-region NZ_PYKA01000051.1 1 9778
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000051.1	RefSeq	region	1	9778	.	+	.	ID=NZ_PYKA01000051.1:1..9778;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000051.1	RefSeq	gene	99	1922	.	+	.	ID=gene-C9E97_RS07085;Name=C9E97_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07085;old_locus_tag=C9E97_07260
NZ_PYKA01000051.1	Protein Homology	CDS	99	1922	.	+	0	ID=cds-WP_000669901.1;Parent=gene-C9E97_RS07085;Dbxref=GenBank:WP_000669901.1;Name=WP_000669901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669888.1;locus_tag=C9E97_RS07085;product=aryl-sulfate sulfotransferase;protein_id=WP_000669901.1;transl_table=11
NZ_PYKA01000051.1	RefSeq	gene	2119	3282	.	-	.	ID=gene-C9E97_RS07090;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=C9E97_RS07090;old_locus_tag=C9E97_07265
NZ_PYKA01000051.1	Protein Homology	CDS	2119	3282	.	-	0	ID=cds-WP_031606086.1;Parent=gene-C9E97_RS07090;Dbxref=GenBank:WP_031606086.1;Name=WP_031606086.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadA;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462867.1;locus_tag=C9E97_RS07090;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_031606086.1;transl_table=11
NZ_PYKA01000051.1	RefSeq	gene	3292	5481	.	-	.	ID=gene-C9E97_RS07095;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=C9E97_RS07095;old_locus_tag=C9E97_07270
NZ_PYKA01000051.1	Protein Homology	CDS	3292	5481	.	-	0	ID=cds-WP_000966001.1;Parent=gene-C9E97_RS07095;Dbxref=GenBank:WP_000966001.1;Name=WP_000966001.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692,GO:0036125;gbkey=CDS;gene=fadB;go_component=fatty acid beta-oxidation multienzyme complex|0036125||IEA;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462868.1;locus_tag=C9E97_RS07095;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_000966001.1;transl_table=11
NZ_PYKA01000051.1	RefSeq	gene	5671	7002	.	+	.	ID=gene-C9E97_RS07100;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=C9E97_RS07100;old_locus_tag=C9E97_07275
NZ_PYKA01000051.1	Protein Homology	CDS	5671	7002	.	+	0	ID=cds-WP_000444529.1;Parent=gene-C9E97_RS07100;Dbxref=GenBank:WP_000444529.1;Name=WP_000444529.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=C9E97_RS07100;product=Xaa-Pro dipeptidase;protein_id=WP_000444529.1;transl_table=11
NZ_PYKA01000051.1	RefSeq	gene	7002	7616	.	+	.	ID=gene-C9E97_RS07105;Name=C9E97_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS07105;old_locus_tag=C9E97_07280
NZ_PYKA01000051.1	Protein Homology	CDS	7002	7616	.	+	0	ID=cds-WP_000378898.1;Parent=gene-C9E97_RS07105;Dbxref=GenBank:WP_000378898.1;Name=WP_000378898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462870.1;locus_tag=C9E97_RS07105;product=IMPACT family protein;protein_id=WP_000378898.1;transl_table=11
NZ_PYKA01000051.1	RefSeq	gene	7655	9106	.	+	.	ID=gene-C9E97_RS07110;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=C9E97_RS07110;old_locus_tag=C9E97_07285
NZ_PYKA01000051.1	Protein Homology	CDS	7655	9106	.	+	0	ID=cds-WP_000545688.1;Parent=gene-C9E97_RS07110;Dbxref=GenBank:WP_000545688.1;Name=WP_000545688.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=C9E97_RS07110;product=Trk system potassium transporter TrkH;protein_id=WP_000545688.1;transl_table=11
NZ_PYKA01000051.1	RefSeq	gene	9118	9663	.	+	.	ID=gene-C9E97_RS07115;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=C9E97_RS07115;old_locus_tag=C9E97_07290
NZ_PYKA01000051.1	Protein Homology	CDS	9118	9663	.	+	0	ID=cds-WP_000853982.1;Parent=gene-C9E97_RS07115;Dbxref=GenBank:WP_000853982.1;Name=WP_000853982.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462872.1;locus_tag=C9E97_RS07115;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_000853982.1;transl_table=11
##sequence-region NZ_PYKA01000133.1 1 103920
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000133.1	RefSeq	region	1	103920	.	+	.	ID=NZ_PYKA01000133.1:1..103920;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000133.1	RefSeq	gene	1	407	.	+	.	ID=gene-C9E97_RS21510;Name=C9E97_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21510;old_locus_tag=C9E97_22035;partial=true;start_range=.,1
NZ_PYKA01000133.1	Protein Homology	CDS	1	407	.	+	2	ID=cds-WP_080103764.1;Parent=gene-C9E97_RS21510;Dbxref=GenBank:WP_080103764.1;Name=WP_080103764.1;Ontology_term=GO:0006814,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=C9E97_RS21510;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_080103764.1;start_range=.,1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	427	1158	.	+	.	ID=gene-C9E97_RS21515;Name=C9E97_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21515;old_locus_tag=C9E97_22040
NZ_PYKA01000133.1	Protein Homology	CDS	427	1158	.	+	0	ID=cds-WP_024792581.1;Parent=gene-C9E97_RS21515;Dbxref=GenBank:WP_024792581.1;Name=WP_024792581.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462260.1;locus_tag=C9E97_RS21515;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_024792581.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	1192	2262	.	-	.	ID=gene-C9E97_RS21520;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=C9E97_RS21520;old_locus_tag=C9E97_22045
NZ_PYKA01000133.1	Protein Homology	CDS	1192	2262	.	-	0	ID=cds-WP_000497705.1;Parent=gene-C9E97_RS21520;Dbxref=GenBank:WP_000497705.1;Name=WP_000497705.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462259.1;locus_tag=C9E97_RS21520;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_000497705.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	2355	3722	.	-	.	ID=gene-C9E97_RS21525;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=C9E97_RS21525;old_locus_tag=C9E97_22050
NZ_PYKA01000133.1	Protein Homology	CDS	2355	3722	.	-	0	ID=cds-WP_000716690.1;Parent=gene-C9E97_RS21525;Dbxref=GenBank:WP_000716690.1;Name=WP_000716690.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462258.1;locus_tag=C9E97_RS21525;product=serine endoprotease DegQ;protein_id=WP_000716690.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	3879	4277	.	-	.	ID=gene-C9E97_RS21530;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=C9E97_RS21530;old_locus_tag=C9E97_22055
NZ_PYKA01000133.1	Protein Homology	CDS	3879	4277	.	-	0	ID=cds-WP_001519074.1;Parent=gene-C9E97_RS21530;Dbxref=GenBank:WP_001519074.1;Name=WP_001519074.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=C9E97_RS21530;product=Z-ring associated protein ZapG;protein_id=WP_001519074.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	4470	5594	.	+	.	ID=gene-C9E97_RS21535;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=C9E97_RS21535;old_locus_tag=C9E97_22060
NZ_PYKA01000133.1	Protein Homology	CDS	4470	5594	.	+	0	ID=cds-WP_115408944.1;Parent=gene-C9E97_RS21535;Dbxref=GenBank:WP_115408944.1;Name=WP_115408944.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462256.1;locus_tag=C9E97_RS21535;product=cell division protein ZapE;protein_id=WP_115408944.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	5895	6323	.	+	.	ID=gene-C9E97_RS21540;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=C9E97_RS21540;old_locus_tag=C9E97_22065
NZ_PYKA01000133.1	Protein Homology	CDS	5895	6323	.	+	0	ID=cds-WP_000847559.1;Parent=gene-C9E97_RS21540;Dbxref=GenBank:WP_000847559.1;Name=WP_000847559.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=C9E97_RS21540;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	6339	6731	.	+	.	ID=gene-C9E97_RS21545;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=C9E97_RS21545;old_locus_tag=C9E97_22070
NZ_PYKA01000133.1	Protein Homology	CDS	6339	6731	.	+	0	ID=cds-WP_000829815.1;Parent=gene-C9E97_RS21545;Dbxref=GenBank:WP_000829815.1;Name=WP_000829815.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=C9E97_RS21545;product=30S ribosomal protein S9;protein_id=WP_000829815.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	7044	7682	.	+	.	ID=gene-C9E97_RS21550;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=C9E97_RS21550;old_locus_tag=C9E97_22075
NZ_PYKA01000133.1	Protein Homology	CDS	7044	7682	.	+	0	ID=cds-WP_135369548.1;Parent=gene-C9E97_RS21550;Dbxref=GenBank:WP_135369548.1;Name=WP_135369548.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=C9E97_RS21550;product=stringent starvation protein SspA;protein_id=WP_135369548.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	7688	8188	.	+	.	ID=gene-C9E97_RS21555;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=C9E97_RS21555;old_locus_tag=C9E97_22080
NZ_PYKA01000133.1	Protein Homology	CDS	7688	8188	.	+	0	ID=cds-WP_000366112.1;Parent=gene-C9E97_RS21555;Dbxref=GenBank:WP_000366112.1;Name=WP_000366112.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462251.1;locus_tag=C9E97_RS21555;product=ClpXP protease specificity-enhancing factor;protein_id=WP_000366112.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	8297	9088	.	+	.	ID=gene-C9E97_RS21560;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=C9E97_RS21560;old_locus_tag=C9E97_22085
NZ_PYKA01000133.1	Protein Homology	CDS	8297	9088	.	+	0	ID=cds-WP_000382926.1;Parent=gene-C9E97_RS21560;Dbxref=GenBank:WP_000382926.1;Name=WP_000382926.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462250.1;locus_tag=C9E97_RS21560;product=transcriptional regulator NanR;protein_id=WP_000382926.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	9223	10116	.	+	.	ID=gene-C9E97_RS21565;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=C9E97_RS21565;old_locus_tag=C9E97_22090
NZ_PYKA01000133.1	Protein Homology	CDS	9223	10116	.	+	0	ID=cds-WP_001029665.1;Parent=gene-C9E97_RS21565;Dbxref=GenBank:WP_001029665.1;Name=WP_001029665.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462249.1;locus_tag=C9E97_RS21565;product=N-acetylneuraminate lyase;protein_id=WP_001029665.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	10232	11722	.	+	.	ID=gene-C9E97_RS21570;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=C9E97_RS21570;old_locus_tag=C9E97_22095
NZ_PYKA01000133.1	Protein Homology	CDS	10232	11722	.	+	0	ID=cds-WP_000108071.1;Parent=gene-C9E97_RS21570;Dbxref=GenBank:WP_000108071.1;Name=WP_000108071.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462248.1;locus_tag=C9E97_RS21570;product=sialic acid transporter NanT;protein_id=WP_000108071.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	11769	12458	.	+	.	ID=gene-C9E97_RS21575;Name=C9E97_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21575;old_locus_tag=C9E97_22100
NZ_PYKA01000133.1	Protein Homology	CDS	11769	12458	.	+	0	ID=cds-WP_094963812.1;Parent=gene-C9E97_RS21575;Dbxref=GenBank:WP_094963812.1;Name=WP_094963812.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462247.1;locus_tag=C9E97_RS21575;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_094963812.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	12455	13330	.	+	.	ID=gene-C9E97_RS21580;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=C9E97_RS21580;old_locus_tag=C9E97_22105
NZ_PYKA01000133.1	Protein Homology	CDS	12455	13330	.	+	0	ID=cds-WP_000208970.1;Parent=gene-C9E97_RS21580;Dbxref=GenBank:WP_000208970.1;Name=WP_000208970.1;Ontology_term=GO:0019262,GO:0005524,GO:0009384;gbkey=CDS;gene=nanK;go_function=ATP binding|0005524||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462246.1;locus_tag=C9E97_RS21580;product=N-acetylmannosamine kinase;protein_id=WP_000208970.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	13327	13794	.	+	.	ID=gene-C9E97_RS21585;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=C9E97_RS21585;old_locus_tag=C9E97_22110
NZ_PYKA01000133.1	Protein Homology	CDS	13327	13794	.	+	0	ID=cds-WP_000979900.1;Parent=gene-C9E97_RS21585;Dbxref=GenBank:WP_000979900.1;Name=WP_000979900.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462245.1;locus_tag=C9E97_RS21585;product=N-acetylneuraminate anomerase;protein_id=WP_000979900.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	13876	15156	.	-	.	ID=gene-C9E97_RS21590;Name=C9E97_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21590;old_locus_tag=C9E97_22115
NZ_PYKA01000133.1	Protein Homology	CDS	13876	15156	.	-	0	ID=cds-WP_135369549.1;Parent=gene-C9E97_RS21590;Dbxref=GenBank:WP_135369549.1;Name=WP_135369549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462244.1;locus_tag=C9E97_RS21590;product=cytosine deaminase;protein_id=WP_135369549.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	15143	16396	.	-	.	ID=gene-C9E97_RS21595;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=C9E97_RS21595;old_locus_tag=C9E97_22120
NZ_PYKA01000133.1	Protein Homology	CDS	15143	16396	.	-	0	ID=cds-WP_023232445.1;Parent=gene-C9E97_RS21595;Dbxref=GenBank:WP_023232445.1;Name=WP_023232445.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462243.1;locus_tag=C9E97_RS21595;product=cytosine permease;protein_id=WP_023232445.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	16513	17616	.	-	.	ID=gene-C9E97_RS21600;Name=C9E97_RS21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21600;old_locus_tag=C9E97_22125
NZ_PYKA01000133.1	Protein Homology	CDS	16513	17616	.	-	0	ID=cds-WP_135369550.1;Parent=gene-C9E97_RS21600;Dbxref=GenBank:WP_135369550.1;Name=WP_135369550.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462242.1;locus_tag=C9E97_RS21600;product=PDDEXK nuclease domain-containing protein;protein_id=WP_135369550.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	17823	19241	.	-	.	ID=gene-C9E97_RS21605;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=C9E97_RS21605;old_locus_tag=C9E97_22130
NZ_PYKA01000133.1	Protein Homology	CDS	17823	19241	.	-	0	ID=cds-WP_000081642.1;Parent=gene-C9E97_RS21605;Dbxref=GenBank:WP_000081642.1;Name=WP_000081642.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=C9E97_RS21605;product=glutamate synthase subunit GltD;protein_id=WP_000081642.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	19251	23711	.	-	.	ID=gene-C9E97_RS21610;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=C9E97_RS21610;old_locus_tag=C9E97_22135
NZ_PYKA01000133.1	Protein Homology	CDS	19251	23711	.	-	0	ID=cds-WP_135369551.1;Parent=gene-C9E97_RS21610;Dbxref=GenBank:WP_135369551.1;Name=WP_135369551.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=C9E97_RS21610;product=glutamate synthase large subunit;protein_id=WP_135369551.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	24383	25312	.	+	.	ID=gene-C9E97_RS21615;Name=C9E97_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21615;old_locus_tag=C9E97_22145
NZ_PYKA01000133.1	Protein Homology	CDS	24383	25312	.	+	0	ID=cds-WP_080244715.1;Parent=gene-C9E97_RS21615;Dbxref=GenBank:WP_080244715.1;Name=WP_080244715.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462239.1;locus_tag=C9E97_RS21615;product=TIGR01212 family radical SAM protein;protein_id=WP_080244715.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	25406	27742	.	+	.	ID=gene-C9E97_RS21620;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=C9E97_RS21620;old_locus_tag=C9E97_22150
NZ_PYKA01000133.1	Protein Homology	CDS	25406	27742	.	+	0	ID=cds-WP_000809813.1;Parent=gene-C9E97_RS21620;Dbxref=GenBank:WP_000809813.1;Name=WP_000809813.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462238.1;locus_tag=C9E97_RS21620;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_000809813.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	27969	28622	.	+	.	ID=gene-C9E97_RS21625;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=C9E97_RS21625;old_locus_tag=C9E97_22155
NZ_PYKA01000133.1	Protein Homology	CDS	27969	28622	.	+	0	ID=cds-WP_000719811.1;Parent=gene-C9E97_RS21625;Dbxref=GenBank:WP_000719811.1;Name=WP_000719811.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462237.1;locus_tag=C9E97_RS21625;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_000719811.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	28619	29347	.	+	.	ID=gene-C9E97_RS21630;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=C9E97_RS21630;old_locus_tag=C9E97_22160
NZ_PYKA01000133.1	Protein Homology	CDS	28619	29347	.	+	0	ID=cds-WP_000044651.1;Parent=gene-C9E97_RS21630;Dbxref=GenBank:WP_000044651.1;Name=WP_000044651.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462236.1;locus_tag=C9E97_RS21630;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_000044651.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	29422	30054	.	-	.	ID=gene-C9E97_RS21635;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=C9E97_RS21635;old_locus_tag=C9E97_22165
NZ_PYKA01000133.1	Protein Homology	CDS	29422	30054	.	-	0	ID=cds-WP_135369552.1;Parent=gene-C9E97_RS21635;Dbxref=GenBank:WP_135369552.1;Name=WP_135369552.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462235.1;locus_tag=C9E97_RS21635;product=PhoP regulatory network protein YrbL;protein_id=WP_135369552.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	30305	30577	.	-	.	ID=gene-C9E97_RS21645;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=C9E97_RS21645;old_locus_tag=C9E97_22175
NZ_PYKA01000133.1	Protein Homology	CDS	30305	30577	.	-	0	ID=cds-WP_000216797.1;Parent=gene-C9E97_RS21645;Dbxref=GenBank:WP_000216797.1;Name=WP_000216797.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=C9E97_RS21645;product=PTS phosphocarrier protein NPr;protein_id=WP_000216797.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	30574	31428	.	-	.	ID=gene-C9E97_RS21650;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=C9E97_RS21650;old_locus_tag=C9E97_22180
NZ_PYKA01000133.1	Protein Homology	CDS	30574	31428	.	-	0	ID=cds-WP_000243749.1;Parent=gene-C9E97_RS21650;Dbxref=GenBank:WP_000243749.1;Name=WP_000243749.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462233.1;locus_tag=C9E97_RS21650;product=RNase adapter RapZ;protein_id=WP_000243749.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	31474	31965	.	-	.	ID=gene-C9E97_RS21655;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=C9E97_RS21655;old_locus_tag=C9E97_22185
NZ_PYKA01000133.1	Protein Homology	CDS	31474	31965	.	-	0	ID=cds-WP_000609332.1;Parent=gene-C9E97_RS21655;Dbxref=GenBank:WP_000609332.1;Name=WP_000609332.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462232.1;locus_tag=C9E97_RS21655;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_000609332.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	32083	32370	.	-	.	ID=gene-C9E97_RS21660;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=C9E97_RS21660;old_locus_tag=C9E97_22190
NZ_PYKA01000133.1	Protein Homology	CDS	32083	32370	.	-	0	ID=cds-WP_001176589.1;Parent=gene-C9E97_RS21660;Dbxref=GenBank:WP_001176589.1;Name=WP_001176589.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462231.1;locus_tag=C9E97_RS21660;product=ribosome hibernation promoting factor;protein_id=WP_001176589.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	32393	33826	.	-	.	ID=gene-C9E97_RS21665;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=C9E97_RS21665;old_locus_tag=C9E97_22195
NZ_PYKA01000133.1	Protein Homology	CDS	32393	33826	.	-	0	ID=cds-WP_000809020.1;Parent=gene-C9E97_RS21665;Dbxref=GenBank:WP_000809020.1;Name=WP_000809020.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462230.1;locus_tag=C9E97_RS21665;product=RNA polymerase factor sigma-54;protein_id=WP_000809020.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	33874	34599	.	-	.	ID=gene-C9E97_RS21670;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=C9E97_RS21670;old_locus_tag=C9E97_22200
NZ_PYKA01000133.1	Protein Homology	CDS	33874	34599	.	-	0	ID=cds-WP_000224104.1;Parent=gene-C9E97_RS21670;Dbxref=GenBank:WP_000224104.1;Name=WP_000224104.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=C9E97_RS21670;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_000224104.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	34606	35160	.	-	.	ID=gene-C9E97_RS21675;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=C9E97_RS21675;old_locus_tag=C9E97_22205
NZ_PYKA01000133.1	Protein Homology	CDS	34606	35160	.	-	0	ID=cds-WP_000669770.1;Parent=gene-C9E97_RS21675;Dbxref=GenBank:WP_000669770.1;Name=WP_000669770.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462228.1;locus_tag=C9E97_RS21675;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_000669770.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	35129	35704	.	-	.	ID=gene-C9E97_RS21680;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=C9E97_RS21680;old_locus_tag=C9E97_22210
NZ_PYKA01000133.1	Protein Homology	CDS	35129	35704	.	-	0	ID=cds-WP_000047845.1;Parent=gene-C9E97_RS21680;Dbxref=GenBank:WP_000047845.1;Name=WP_000047845.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462227.1;locus_tag=C9E97_RS21680;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000047845.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	35701	36267	.	-	.	ID=gene-C9E97_RS21685;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=C9E97_RS21685;old_locus_tag=C9E97_22215
NZ_PYKA01000133.1	Protein Homology	CDS	35701	36267	.	-	0	ID=cds-WP_000030029.1;Parent=gene-C9E97_RS21685;Dbxref=GenBank:WP_000030029.1;Name=WP_000030029.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462226.1;locus_tag=C9E97_RS21685;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_000030029.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	36288	37274	.	-	.	ID=gene-C9E97_RS21690;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=C9E97_RS21690;old_locus_tag=C9E97_22220
NZ_PYKA01000133.1	Protein Homology	CDS	36288	37274	.	-	0	ID=cds-WP_000018617.1;Parent=gene-C9E97_RS21690;Dbxref=GenBank:WP_000018617.1;Name=WP_000018617.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462225.1;locus_tag=C9E97_RS21690;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_000018617.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	37288	38265	.	-	.	ID=gene-C9E97_RS21695;Name=C9E97_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21695;old_locus_tag=C9E97_22225
NZ_PYKA01000133.1	Protein Homology	CDS	37288	38265	.	-	0	ID=cds-WP_000922736.1;Parent=gene-C9E97_RS21695;Dbxref=GenBank:WP_000922736.1;Name=WP_000922736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462224.1;locus_tag=C9E97_RS21695;product=calcium/sodium antiporter;protein_id=WP_000922736.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	38478	39290	.	+	.	ID=gene-C9E97_RS21700;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=C9E97_RS21700;old_locus_tag=C9E97_22230
NZ_PYKA01000133.1	Protein Homology	CDS	38478	39290	.	+	0	ID=cds-WP_000531566.1;Parent=gene-C9E97_RS21700;Dbxref=GenBank:WP_000531566.1;Name=WP_000531566.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462223.1;locus_tag=C9E97_RS21700;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_000531566.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	39298	40080	.	+	.	ID=gene-C9E97_RS21705;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=C9E97_RS21705;old_locus_tag=C9E97_22235
NZ_PYKA01000133.1	Protein Homology	CDS	39298	40080	.	+	0	ID=cds-WP_000925786.1;Parent=gene-C9E97_RS21705;Dbxref=GenBank:WP_000925786.1;Name=WP_000925786.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=C9E97_RS21705;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_000925786.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	40085	40636	.	+	.	ID=gene-C9E97_RS21710;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=C9E97_RS21710;old_locus_tag=C9E97_22240
NZ_PYKA01000133.1	Protein Homology	CDS	40085	40636	.	+	0	ID=cds-WP_001193589.1;Parent=gene-C9E97_RS21710;Dbxref=GenBank:WP_001193589.1;Name=WP_001193589.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462221.1;locus_tag=C9E97_RS21710;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_001193589.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	40655	41290	.	+	.	ID=gene-C9E97_RS21715;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=C9E97_RS21715;old_locus_tag=C9E97_22245
NZ_PYKA01000133.1	Protein Homology	CDS	40655	41290	.	+	0	ID=cds-WP_000476467.1;Parent=gene-C9E97_RS21715;Dbxref=GenBank:WP_000476467.1;Name=WP_000476467.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462220.1;locus_tag=C9E97_RS21715;product=phospholipid-binding protein MlaC;protein_id=WP_000476467.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	41290	41586	.	+	.	ID=gene-C9E97_RS21720;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=C9E97_RS21720;old_locus_tag=C9E97_22250
NZ_PYKA01000133.1	Protein Homology	CDS	41290	41586	.	+	0	ID=cds-WP_000188844.1;Parent=gene-C9E97_RS21720;Dbxref=GenBank:WP_000188844.1;Name=WP_000188844.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462219.1;locus_tag=C9E97_RS21720;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_000188844.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	41774	42028	.	+	.	ID=gene-C9E97_RS21725;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=C9E97_RS21725;old_locus_tag=C9E97_22255
NZ_PYKA01000133.1	Protein Homology	CDS	41774	42028	.	+	0	ID=cds-WP_001518349.1;Parent=gene-C9E97_RS21725;Dbxref=GenBank:WP_001518349.1;Name=WP_001518349.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=C9E97_RS21725;product=BolA family iron metabolism protein IbaG;protein_id=WP_001518349.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	42082	43341	.	+	.	ID=gene-C9E97_RS21730;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=C9E97_RS21730;old_locus_tag=C9E97_22260
NZ_PYKA01000133.1	Protein Homology	CDS	42082	43341	.	+	0	ID=cds-WP_000357288.1;Parent=gene-C9E97_RS21730;Dbxref=GenBank:WP_000357288.1;Name=WP_000357288.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462217.1;locus_tag=C9E97_RS21730;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357288.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	43400	43687	.	-	.	ID=gene-C9E97_RS21735;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=C9E97_RS21735;old_locus_tag=C9E97_22265
NZ_PYKA01000133.1	Protein Homology	CDS	43400	43687	.	-	0	ID=cds-WP_000444167.1;Parent=gene-C9E97_RS21735;Dbxref=GenBank:WP_000444167.1;Name=WP_000444167.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462216.1;locus_tag=C9E97_RS21735;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_000444167.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	43919	44890	.	-	.	ID=gene-C9E97_RS21740;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=C9E97_RS21740;old_locus_tag=C9E97_22270
NZ_PYKA01000133.1	Protein Homology	CDS	43919	44890	.	-	0	ID=cds-WP_001047354.1;Parent=gene-C9E97_RS21740;Dbxref=GenBank:WP_001047354.1;Name=WP_001047354.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462215.1;locus_tag=C9E97_RS21740;product=octaprenyl diphosphate synthase;protein_id=WP_001047354.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	45148	45459	.	+	.	ID=gene-C9E97_RS21745;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=C9E97_RS21745;old_locus_tag=C9E97_22275
NZ_PYKA01000133.1	Protein Homology	CDS	45148	45459	.	+	0	ID=cds-WP_000271396.1;Parent=gene-C9E97_RS21745;Dbxref=GenBank:WP_000271396.1;Name=WP_000271396.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=C9E97_RS21745;product=50S ribosomal protein L21;protein_id=WP_000271396.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	45479	45736	.	+	.	ID=gene-C9E97_RS21750;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=C9E97_RS21750;old_locus_tag=C9E97_22280
NZ_PYKA01000133.1	Protein Homology	CDS	45479	45736	.	+	0	ID=cds-WP_000940593.1;Parent=gene-C9E97_RS21750;Dbxref=GenBank:WP_000940593.1;Name=WP_000940593.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=C9E97_RS21750;product=50S ribosomal protein L27;protein_id=WP_000940593.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	45866	46831	.	+	.	ID=gene-C9E97_RS21755;Name=C9E97_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21755;old_locus_tag=C9E97_22285
NZ_PYKA01000133.1	Protein Homology	CDS	45866	46831	.	+	0	ID=cds-WP_000813052.1;Parent=gene-C9E97_RS21755;Dbxref=GenBank:WP_000813052.1;Name=WP_000813052.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=C9E97_RS21755;product=DMT family transporter;protein_id=WP_000813052.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	46847	48019	.	+	.	ID=gene-C9E97_RS21760;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=C9E97_RS21760;old_locus_tag=C9E97_22290
NZ_PYKA01000133.1	Protein Homology	CDS	46847	48019	.	+	0	ID=cds-WP_000673556.1;Parent=gene-C9E97_RS21760;Dbxref=GenBank:WP_000673556.1;Name=WP_000673556.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462212.1;locus_tag=C9E97_RS21760;product=Obg family GTPase CgtA;protein_id=WP_000673556.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	48150	49583	.	-	.	ID=gene-C9E97_RS21765;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=C9E97_RS21765;old_locus_tag=C9E97_22295
NZ_PYKA01000133.1	Protein Homology	CDS	48150	49583	.	-	0	ID=cds-WP_023195695.1;Parent=gene-C9E97_RS21765;Dbxref=GenBank:WP_023195695.1;Name=WP_023195695.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462211.1;locus_tag=C9E97_RS21765;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_023195695.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	49831	50307	.	+	.	ID=gene-C9E97_RS21770;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=C9E97_RS21770;old_locus_tag=C9E97_22300
NZ_PYKA01000133.1	Protein Homology	CDS	49831	50307	.	+	0	ID=cds-WP_001148008.1;Parent=gene-C9E97_RS21770;Dbxref=GenBank:WP_001148008.1;Name=WP_001148008.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=C9E97_RS21770;product=transcription elongation factor GreA;protein_id=WP_001148008.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	50463	50756	.	-	.	ID=gene-C9E97_RS21775;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=C9E97_RS21775;old_locus_tag=C9E97_22305
NZ_PYKA01000133.1	Protein Homology	CDS	50463	50756	.	-	0	ID=cds-WP_001592995.1;Parent=gene-C9E97_RS21775;Dbxref=GenBank:WP_001592995.1;Name=WP_001592995.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=C9E97_RS21775;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001592995.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	50883	51509	.	+	.	ID=gene-C9E97_RS21780;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=C9E97_RS21780;old_locus_tag=C9E97_22310
NZ_PYKA01000133.1	Protein Homology	CDS	50883	51509	.	+	0	ID=cds-WP_000145974.1;Parent=gene-C9E97_RS21780;Dbxref=GenBank:WP_000145974.1;Name=WP_000145974.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462208.1;locus_tag=C9E97_RS21780;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_000145974.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	51613	53547	.	+	.	ID=gene-C9E97_RS21785;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=C9E97_RS21785;old_locus_tag=C9E97_22320
NZ_PYKA01000133.1	Protein Homology	CDS	51613	53547	.	+	0	ID=cds-WP_001107481.1;Parent=gene-C9E97_RS21785;Dbxref=GenBank:WP_001107481.1;Name=WP_001107481.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=C9E97_RS21785;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001107481.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	53652	54500	.	+	.	ID=gene-C9E97_RS21790;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=C9E97_RS21790;old_locus_tag=C9E97_22325
NZ_PYKA01000133.1	Protein Homology	CDS	53652	54500	.	+	0	ID=cds-WP_000764711.1;Parent=gene-C9E97_RS21790;Dbxref=GenBank:WP_000764711.1;Name=WP_000764711.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462206.1;locus_tag=C9E97_RS21790;product=dihydropteroate synthase;protein_id=WP_000764711.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	54493	55830	.	+	.	ID=gene-C9E97_RS21795;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=C9E97_RS21795;old_locus_tag=C9E97_22330
NZ_PYKA01000133.1	Protein Homology	CDS	54493	55830	.	+	0	ID=cds-WP_000071169.1;Parent=gene-C9E97_RS21795;Dbxref=GenBank:WP_000071169.1;Name=WP_000071169.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462205.1;locus_tag=C9E97_RS21795;product=phosphoglucosamine mutase;protein_id=WP_000071169.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	56053	56385	.	+	.	ID=gene-C9E97_RS21800;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=C9E97_RS21800;old_locus_tag=C9E97_22335
NZ_PYKA01000133.1	Protein Homology	CDS	56053	56385	.	+	0	ID=cds-WP_000272680.1;Parent=gene-C9E97_RS21800;Dbxref=GenBank:WP_000272680.1;Name=WP_000272680.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462204.1;locus_tag=C9E97_RS21800;product=preprotein translocase subunit SecG;protein_id=WP_000272680.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	56399	56485	.	+	.	ID=gene-C9E97_RS21805;Name=C9E97_RS21805;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS21805;old_locus_tag=C9E97_22340
NZ_PYKA01000133.1	tRNAscan-SE	tRNA	56399	56485	.	+	.	ID=rna-C9E97_RS21805;Parent=gene-C9E97_RS21805;anticodon=(pos:56433..56435);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS21805;product=tRNA-Leu
NZ_PYKA01000133.1	tRNAscan-SE	exon	56399	56485	.	+	.	ID=exon-C9E97_RS21805-1;Parent=rna-C9E97_RS21805;anticodon=(pos:56433..56435);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS21805;product=tRNA-Leu
NZ_PYKA01000133.1	RefSeq	gene	56821	57885	.	+	.	ID=gene-C9E97_RS21810;Name=C9E97_RS21810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21810;old_locus_tag=C9E97_22345
NZ_PYKA01000133.1	Protein Homology	CDS	56821	57885	.	+	0	ID=cds-WP_000051504.1;Parent=gene-C9E97_RS21810;Dbxref=GenBank:WP_000051504.1;Name=WP_000051504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462203.1;locus_tag=C9E97_RS21810;product=DUF1963 domain-containing protein;protein_id=WP_000051504.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	57971	59314	.	-	.	ID=gene-C9E97_RS21815;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=C9E97_RS21815;old_locus_tag=C9E97_22350
NZ_PYKA01000133.1	Protein Homology	CDS	57971	59314	.	-	0	ID=cds-WP_000207648.1;Parent=gene-C9E97_RS21815;Dbxref=GenBank:WP_000207648.1;Name=WP_000207648.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=C9E97_RS21815;product=argininosuccinate synthase;protein_id=WP_000207648.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	59658	59734	.	+	.	ID=gene-C9E97_RS21820;Name=C9E97_RS21820;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS21820;old_locus_tag=C9E97_22355
NZ_PYKA01000133.1	tRNAscan-SE	tRNA	59658	59734	.	+	.	ID=rna-C9E97_RS21820;Parent=gene-C9E97_RS21820;anticodon=(pos:59692..59694);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS21820;product=tRNA-Met
NZ_PYKA01000133.1	tRNAscan-SE	exon	59658	59734	.	+	.	ID=exon-C9E97_RS21820-1;Parent=rna-C9E97_RS21820;anticodon=(pos:59692..59694);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS21820;product=tRNA-Met
NZ_PYKA01000133.1	RefSeq	gene	59942	60394	.	+	.	ID=gene-C9E97_RS21825;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=C9E97_RS21825;old_locus_tag=C9E97_22360
NZ_PYKA01000133.1	Protein Homology	CDS	59942	60394	.	+	0	ID=cds-WP_000105461.1;Parent=gene-C9E97_RS21825;Dbxref=GenBank:WP_000105461.1;Name=WP_000105461.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=C9E97_RS21825;product=ribosome maturation factor RimP;protein_id=WP_000105461.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	60422	61924	.	+	.	ID=gene-C9E97_RS21830;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=C9E97_RS21830;old_locus_tag=C9E97_22365
NZ_PYKA01000133.1	Protein Homology	CDS	60422	61924	.	+	0	ID=cds-WP_001031038.1;Parent=gene-C9E97_RS21830;Dbxref=GenBank:WP_001031038.1;Name=WP_001031038.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=C9E97_RS21830;product=transcription termination factor NusA;protein_id=WP_001031038.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	61949	64627	.	+	.	ID=gene-C9E97_RS21835;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=C9E97_RS21835;old_locus_tag=C9E97_22370
NZ_PYKA01000133.1	Protein Homology	CDS	61949	64627	.	+	0	ID=cds-WP_000133064.1;Parent=gene-C9E97_RS21835;Dbxref=GenBank:WP_000133064.1;Name=WP_000133064.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462199.1;locus_tag=C9E97_RS21835;product=translation initiation factor IF-2;protein_id=WP_000133064.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	64848	65249	.	+	.	ID=gene-C9E97_RS21840;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=C9E97_RS21840;old_locus_tag=C9E97_22375
NZ_PYKA01000133.1	Protein Homology	CDS	64848	65249	.	+	0	ID=cds-WP_001040208.1;Parent=gene-C9E97_RS21840;Dbxref=GenBank:WP_001040208.1;Name=WP_001040208.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=C9E97_RS21840;product=30S ribosome-binding factor RbfA;protein_id=WP_001040208.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	65249	66193	.	+	.	ID=gene-C9E97_RS21845;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=C9E97_RS21845;old_locus_tag=C9E97_22380
NZ_PYKA01000133.1	Protein Homology	CDS	65249	66193	.	+	0	ID=cds-WP_135369572.1;Parent=gene-C9E97_RS21845;Dbxref=GenBank:WP_135369572.1;Name=WP_135369572.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462197.1;locus_tag=C9E97_RS21845;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_135369572.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	66344	66613	.	+	.	ID=gene-C9E97_RS21850;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=C9E97_RS21850;old_locus_tag=C9E97_22385
NZ_PYKA01000133.1	Protein Homology	CDS	66344	66613	.	+	0	ID=cds-WP_000059465.1;Parent=gene-C9E97_RS21850;Dbxref=GenBank:WP_000059465.1;Name=WP_000059465.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=C9E97_RS21850;product=30S ribosomal protein S15;protein_id=WP_000059465.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	66855	68990	.	+	.	ID=gene-C9E97_RS21855;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=C9E97_RS21855;old_locus_tag=C9E97_22390
NZ_PYKA01000133.1	Protein Homology	CDS	66855	68990	.	+	0	ID=cds-WP_001670767.1;Parent=gene-C9E97_RS21855;Dbxref=GenBank:WP_001670767.1;Name=WP_001670767.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462195.1;locus_tag=C9E97_RS21855;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_001670767.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	69100	69984	.	+	.	ID=gene-C9E97_RS21860;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=C9E97_RS21860;old_locus_tag=C9E97_22395
NZ_PYKA01000133.1	Protein Homology	CDS	69100	69984	.	+	0	ID=cds-WP_000802069.1;Parent=gene-C9E97_RS21860;Dbxref=GenBank:WP_000802069.1;Name=WP_000802069.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=C9E97_RS21860;product=lipoprotein NlpI;protein_id=WP_000802069.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	70090	70170	.	+	.	ID=gene-C9E97_RS21865;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=C9E97_RS21865
NZ_PYKA01000133.1	Protein Homology	CDS	70090	70170	.	+	0	ID=cds-WP_010723222.1;Parent=gene-C9E97_RS21865;Dbxref=GenBank:WP_010723222.1;Name=WP_010723222.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=C9E97_RS21865;product=protein YrbN;protein_id=WP_010723222.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	70163	72052	.	+	.	ID=gene-C9E97_RS21870;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=C9E97_RS21870;old_locus_tag=C9E97_22400
NZ_PYKA01000133.1	Protein Homology	CDS	70163	72052	.	+	0	ID=cds-WP_000807248.1;Parent=gene-C9E97_RS21870;Dbxref=GenBank:WP_000807248.1;Name=WP_000807248.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312070.2;locus_tag=C9E97_RS21870;product=ATP-dependent RNA helicase DeaD;protein_id=WP_000807248.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	72206	73450	.	+	.	ID=gene-C9E97_RS21875;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=C9E97_RS21875;old_locus_tag=C9E97_22405
NZ_PYKA01000133.1	Protein Homology	CDS	72206	73450	.	+	0	ID=cds-WP_000224372.1;Parent=gene-C9E97_RS21875;Dbxref=GenBank:WP_000224372.1;Name=WP_000224372.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462192.1;locus_tag=C9E97_RS21875;product=tryptophan permease;protein_id=WP_000224372.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	73511	74041	.	-	.	ID=gene-C9E97_RS21880;Name=C9E97_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21880;old_locus_tag=C9E97_22410
NZ_PYKA01000133.1	Protein Homology	CDS	73511	74041	.	-	0	ID=cds-WP_001294027.1;Parent=gene-C9E97_RS21880;Dbxref=GenBank:WP_001294027.1;Name=WP_001294027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462191.1;locus_tag=C9E97_RS21880;product=hypothetical protein;protein_id=WP_001294027.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	74200	74919	.	+	.	ID=gene-C9E97_RS21885;Name=C9E97_RS21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21885;old_locus_tag=C9E97_22415
NZ_PYKA01000133.1	Protein Homology	CDS	74200	74919	.	+	0	ID=cds-WP_000532745.1;Parent=gene-C9E97_RS21885;Dbxref=GenBank:WP_000532745.1;Name=WP_000532745.1;Ontology_term=GO:0018104,GO:0071972;gbkey=CDS;go_function=peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462190.1;locus_tag=C9E97_RS21885;product=L%2CD-transpeptidase family protein;protein_id=WP_000532745.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	74897	75904	.	-	.	ID=gene-C9E97_RS21890;Name=C9E97_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21890;old_locus_tag=C9E97_22420
NZ_PYKA01000133.1	Protein Homology	CDS	74897	75904	.	-	0	ID=cds-WP_135369571.1;Parent=gene-C9E97_RS21890;Dbxref=GenBank:WP_135369571.1;Name=WP_135369571.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462189.1;locus_tag=C9E97_RS21890;product=luciferase-like monooxygenase;protein_id=WP_135369571.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	76082	76960	.	-	.	ID=gene-C9E97_RS21895;Name=C9E97_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21895;old_locus_tag=C9E97_22425
NZ_PYKA01000133.1	Protein Homology	CDS	76082	76960	.	-	0	ID=cds-WP_431194530.1;Parent=gene-C9E97_RS21895;Dbxref=GenBank:WP_431194530.1;Name=WP_431194530.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312067.2;locus_tag=C9E97_RS21895;product=U32 family peptidase;protein_id=WP_431194530.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	76969	77964	.	-	.	ID=gene-C9E97_RS21900;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=C9E97_RS21900;old_locus_tag=C9E97_22430
NZ_PYKA01000133.1	Protein Homology	CDS	76969	77964	.	-	0	ID=cds-WP_000421309.1;Parent=gene-C9E97_RS21900;Dbxref=GenBank:WP_000421309.1;Name=WP_000421309.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=C9E97_RS21900;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_000421309.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	78181	78705	.	+	.	ID=gene-C9E97_RS21905;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=C9E97_RS21905;old_locus_tag=C9E97_22435
NZ_PYKA01000133.1	Protein Homology	CDS	78181	78705	.	+	0	ID=cds-WP_000884721.1;Parent=gene-C9E97_RS21905;Dbxref=GenBank:WP_000884721.1;Name=WP_000884721.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462186.1;locus_tag=C9E97_RS21905;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_000884721.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	78699	79202	.	+	.	ID=gene-C9E97_RS21910;Name=C9E97_RS21910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21910;old_locus_tag=C9E97_22440
NZ_PYKA01000133.1	Protein Homology	CDS	78699	79202	.	+	0	ID=cds-WP_000908562.1;Parent=gene-C9E97_RS21910;Dbxref=GenBank:WP_000908562.1;Name=WP_000908562.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462185.1;locus_tag=C9E97_RS21910;product=GNAT family N-acetyltransferase;protein_id=WP_000908562.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	79189	79506	.	-	.	ID=gene-C9E97_RS21915;Name=C9E97_RS21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21915;old_locus_tag=C9E97_22445
NZ_PYKA01000133.1	Protein Homology	CDS	79189	79506	.	-	0	ID=cds-WP_000928379.1;Parent=gene-C9E97_RS21915;Dbxref=GenBank:WP_000928379.1;Name=WP_000928379.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462184.3;locus_tag=C9E97_RS21915;product=GIY-YIG nuclease family protein;protein_id=WP_000928379.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	79544	79987	.	+	.	ID=gene-C9E97_RS21920;Name=C9E97_RS21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21920;old_locus_tag=C9E97_22450
NZ_PYKA01000133.1	Protein Homology	CDS	79544	79987	.	+	0	ID=cds-WP_000380404.1;Parent=gene-C9E97_RS21920;Dbxref=GenBank:WP_000380404.1;Name=WP_000380404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462183.1;locus_tag=C9E97_RS21920;product=YhbP family protein;protein_id=WP_000380404.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	79967	80485	.	-	.	ID=gene-C9E97_RS21925;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=C9E97_RS21925;old_locus_tag=C9E97_22455
NZ_PYKA01000133.1	Protein Homology	CDS	79967	80485	.	-	0	ID=cds-WP_000037599.1;Parent=gene-C9E97_RS21925;Dbxref=GenBank:WP_000037599.1;Name=WP_000037599.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462182.1;locus_tag=C9E97_RS21925;product=protein/nucleic acid deglycase;protein_id=WP_000037599.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	80616	81251	.	+	.	ID=gene-C9E97_RS21930;Name=C9E97_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21930;old_locus_tag=C9E97_22460
NZ_PYKA01000133.1	Protein Homology	CDS	80616	81251	.	+	0	ID=cds-WP_001537613.1;Parent=gene-C9E97_RS21930;Dbxref=GenBank:WP_001537613.1;Name=WP_001537613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084527.1;locus_tag=C9E97_RS21930;product=NAD(P)H-binding protein;protein_id=WP_001537613.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	81318	81893	.	-	.	ID=gene-C9E97_RS21935;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=C9E97_RS21935;old_locus_tag=C9E97_22465
NZ_PYKA01000133.1	Protein Homology	CDS	81318	81893	.	-	0	ID=cds-WP_000643280.1;Parent=gene-C9E97_RS21935;Dbxref=GenBank:WP_000643280.1;Name=WP_000643280.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462180.1;locus_tag=C9E97_RS21935;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_000643280.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	81903	82493	.	-	.	ID=gene-C9E97_RS21940;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=C9E97_RS21940;old_locus_tag=C9E97_22470
NZ_PYKA01000133.1	Protein Homology	CDS	81903	82493	.	-	0	ID=cds-WP_000893481.1;Parent=gene-C9E97_RS21940;Dbxref=GenBank:WP_000893481.1;Name=WP_000893481.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462179.1;locus_tag=C9E97_RS21940;product=DnaA initiator-associating protein DiaA;protein_id=WP_000893481.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	82515	82910	.	-	.	ID=gene-C9E97_RS21945;Name=C9E97_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21945;old_locus_tag=C9E97_22475
NZ_PYKA01000133.1	Protein Homology	CDS	82515	82910	.	-	0	ID=cds-WP_000057285.1;Parent=gene-C9E97_RS21945;Dbxref=GenBank:WP_000057285.1;Name=WP_000057285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462178.1;locus_tag=C9E97_RS21945;product=YraN family protein;protein_id=WP_000057285.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	82868	84910	.	-	.	ID=gene-C9E97_RS21950;Name=C9E97_RS21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21950;old_locus_tag=C9E97_22480
NZ_PYKA01000133.1	Protein Homology	CDS	82868	84910	.	-	0	ID=cds-WP_135369569.1;Parent=gene-C9E97_RS21950;Dbxref=GenBank:WP_135369569.1;Name=WP_135369569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=C9E97_RS21950;product=penicillin-binding protein activator;protein_id=WP_135369569.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	84974	85837	.	+	.	ID=gene-C9E97_RS21955;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=C9E97_RS21955;old_locus_tag=C9E97_22485
NZ_PYKA01000133.1	Protein Homology	CDS	84974	85837	.	+	0	ID=cds-WP_135369568.1;Parent=gene-C9E97_RS21955;Dbxref=GenBank:WP_135369568.1;Name=WP_135369568.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462176.1;locus_tag=C9E97_RS21955;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_135369568.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	85994	86767	.	-	.	ID=gene-C9E97_RS21960;Name=C9E97_RS21960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21960;old_locus_tag=C9E97_22490
NZ_PYKA01000133.1	Protein Homology	CDS	85994	86767	.	-	0	ID=cds-WP_001083896.1;Parent=gene-C9E97_RS21960;Dbxref=GenBank:WP_001083896.1;Name=WP_001083896.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462175.1;locus_tag=C9E97_RS21960;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001083896.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	86878	87921	.	-	.	ID=gene-C9E97_RS21965;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=C9E97_RS21965;old_locus_tag=C9E97_22495
NZ_PYKA01000133.1	Protein Homology	CDS	86878	87921	.	-	0	ID=cds-WP_000844173.1;Parent=gene-C9E97_RS21965;Dbxref=GenBank:WP_000844173.1;Name=WP_000844173.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462174.1;locus_tag=C9E97_RS21965;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_000844173.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	87965	89338	.	-	.	ID=gene-C9E97_RS21970;Name=C9E97_RS21970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21970;old_locus_tag=C9E97_22500
NZ_PYKA01000133.1	Protein Homology	CDS	87965	89338	.	-	0	ID=cds-WP_000490601.1;Parent=gene-C9E97_RS21970;Dbxref=GenBank:WP_000490601.1;Name=WP_000490601.1;Ontology_term=GO:0009401,GO:0015796,GO:0015577,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=galactitol transmembrane transporter activity|0015577||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,galactitol transmembrane transport|0015796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462173.1;locus_tag=C9E97_RS21970;product=galactitol-specific PTS transporter subunit IIC;protein_id=WP_000490601.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	89342	89626	.	-	.	ID=gene-C9E97_RS21975;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=C9E97_RS21975;old_locus_tag=C9E97_22505
NZ_PYKA01000133.1	Protein Homology	CDS	89342	89626	.	-	0	ID=cds-WP_000824292.1;Parent=gene-C9E97_RS21975;Dbxref=GenBank:WP_000824292.1;Name=WP_000824292.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462172.1;locus_tag=C9E97_RS21975;product=PTS galactitol transporter subunit IIB;protein_id=WP_000824292.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	89657	90121	.	-	.	ID=gene-C9E97_RS21980;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=C9E97_RS21980;old_locus_tag=C9E97_22510
NZ_PYKA01000133.1	Protein Homology	CDS	89657	90121	.	-	0	ID=cds-WP_000080445.1;Parent=gene-C9E97_RS21980;Dbxref=GenBank:WP_000080445.1;Name=WP_000080445.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462171.1;locus_tag=C9E97_RS21980;product=PTS galactitol transporter subunit IIA;protein_id=WP_000080445.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	90136	91407	.	-	.	ID=gene-C9E97_RS21985;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=C9E97_RS21985;old_locus_tag=C9E97_22515
NZ_PYKA01000133.1	Protein Homology	CDS	90136	91407	.	-	0	ID=cds-WP_000658627.1;Parent=gene-C9E97_RS21985;Dbxref=GenBank:WP_000658627.1;Name=WP_000658627.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462170.1;locus_tag=C9E97_RS21985;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WP_000658627.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	91605	92411	.	-	.	ID=gene-C9E97_RS21990;Name=C9E97_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21990;old_locus_tag=C9E97_22520
NZ_PYKA01000133.1	Protein Homology	CDS	91605	92411	.	-	0	ID=cds-WP_001175241.1;Parent=gene-C9E97_RS21990;Dbxref=GenBank:WP_001175241.1;Name=WP_001175241.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462169.1;locus_tag=C9E97_RS21990;product=HPr family phosphocarrier protein;protein_id=WP_001175241.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	92398	93825	.	-	.	ID=gene-C9E97_RS21995;Name=C9E97_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21995;old_locus_tag=C9E97_22525
NZ_PYKA01000133.1	Protein Homology	CDS	92398	93825	.	-	0	ID=cds-WP_023204541.1;Parent=gene-C9E97_RS21995;Dbxref=GenBank:WP_023204541.1;Name=WP_023204541.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462168.1;locus_tag=C9E97_RS21995;product=PTS fructose transporter subunit IIC;protein_id=WP_023204541.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	93852	94766	.	-	.	ID=gene-C9E97_RS22000;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=C9E97_RS22000;old_locus_tag=C9E97_22530
NZ_PYKA01000133.1	Protein Homology	CDS	93852	94766	.	-	0	ID=cds-WP_001748603.1;Parent=gene-C9E97_RS22000;Dbxref=GenBank:WP_001748603.1;Name=WP_001748603.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462167.1;locus_tag=C9E97_RS22000;product=1-phosphofructokinase;protein_id=WP_001748603.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	94777	95631	.	-	.	ID=gene-C9E97_RS22005;Name=C9E97_RS22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22005;old_locus_tag=C9E97_22535
NZ_PYKA01000133.1	Protein Homology	CDS	94777	95631	.	-	0	ID=cds-WP_000469985.1;Parent=gene-C9E97_RS22005;Dbxref=GenBank:WP_000469985.1;Name=WP_000469985.1;Ontology_term=GO:0005975,GO:0008270,GO:0009025;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462166.1;locus_tag=C9E97_RS22005;product=tagatose bisphosphate family class II aldolase;protein_id=WP_000469985.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	95965	96798	.	+	.	ID=gene-C9E97_RS22010;Name=C9E97_RS22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22010;old_locus_tag=C9E97_22540
NZ_PYKA01000133.1	Protein Homology	CDS	95965	96798	.	+	0	ID=cds-WP_001118363.1;Parent=gene-C9E97_RS22010;Dbxref=GenBank:WP_001118363.1;Name=WP_001118363.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462165.1;locus_tag=C9E97_RS22010;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001118363.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	96809	97756	.	+	.	ID=gene-C9E97_RS22015;Name=C9E97_RS22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS22015;old_locus_tag=C9E97_22545
NZ_PYKA01000133.1	Protein Homology	CDS	96809	97756	.	+	0	ID=cds-WP_001027807.1;Parent=gene-C9E97_RS22015;Dbxref=GenBank:WP_001027807.1;Name=WP_001027807.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462164.1;locus_tag=C9E97_RS22015;product=sugar kinase;protein_id=WP_001027807.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	97996	99567	.	-	.	ID=gene-C9E97_RS22020;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=C9E97_RS22020;old_locus_tag=C9E97_22550
NZ_PYKA01000133.1	Protein Homology	CDS	97996	99567	.	-	0	ID=cds-WP_001273723.1;Parent=gene-C9E97_RS22020;Dbxref=GenBank:WP_001273723.1;Name=WP_001273723.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462163.1;locus_tag=C9E97_RS22020;product=galactarate dehydratase;protein_id=WP_001273723.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	100097	100867	.	+	.	ID=gene-C9E97_RS22025;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=C9E97_RS22025;old_locus_tag=C9E97_22555
NZ_PYKA01000133.1	Protein Homology	CDS	100097	100867	.	+	0	ID=cds-WP_001057715.1;Parent=gene-C9E97_RS22025;Dbxref=GenBank:WP_001057715.1;Name=WP_001057715.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462162.1;locus_tag=C9E97_RS22025;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_001057715.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	100893	101783	.	+	.	ID=gene-C9E97_RS22030;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=C9E97_RS22030;old_locus_tag=C9E97_22560
NZ_PYKA01000133.1	Protein Homology	CDS	100893	101783	.	+	0	ID=cds-WP_000178106.1;Parent=gene-C9E97_RS22030;Dbxref=GenBank:WP_000178106.1;Name=WP_000178106.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=C9E97_RS22030;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000178106.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	101881	103026	.	+	.	ID=gene-C9E97_RS22035;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=C9E97_RS22035;old_locus_tag=C9E97_22565
NZ_PYKA01000133.1	Protein Homology	CDS	101881	103026	.	+	0	ID=cds-WP_000706458.1;Parent=gene-C9E97_RS22035;Dbxref=GenBank:WP_000706458.1;Name=WP_000706458.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462160.1;locus_tag=C9E97_RS22035;product=glycerate 2-kinase;protein_id=WP_000706458.1;transl_table=11
NZ_PYKA01000133.1	RefSeq	gene	103059	103433	.	+	.	ID=gene-C9E97_RS22040;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=C9E97_RS22040;old_locus_tag=C9E97_22570
NZ_PYKA01000133.1	cmsearch	RNase_P_RNA	103059	103433	.	+	.	ID=rna-C9E97_RS22040;Parent=gene-C9E97_RS22040;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS22040;product=RNase P RNA component class A
NZ_PYKA01000133.1	cmsearch	exon	103059	103433	.	+	.	ID=exon-C9E97_RS22040-1;Parent=rna-C9E97_RS22040;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS22040;product=RNase P RNA component class A
##sequence-region NZ_PYKA01000076.1 1 9101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000076.1	RefSeq	region	1	9101	.	+	.	ID=NZ_PYKA01000076.1:1..9101;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000076.1	RefSeq	pseudogene	1	367	.	-	.	ID=gene-C9E97_RS10845;Name=C9E97_RS10845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS10845;old_locus_tag=C9E97_11095;partial=true;pseudo=true;start_range=.,1
NZ_PYKA01000076.1	Protein Homology	CDS	1	367	.	-	0	ID=cds-C9E97_RS10845;Parent=gene-C9E97_RS10845;Note=catalyzes the formation of pyruvate from oxaloacetate%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9E97_RS10845;partial=true;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKA01000076.1	RefSeq	gene	384	623	.	-	.	ID=gene-C9E97_RS10850;Name=C9E97_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS10850;old_locus_tag=C9E97_11100
NZ_PYKA01000076.1	Protein Homology	CDS	384	623	.	-	0	ID=cds-WP_001001154.1;Parent=gene-C9E97_RS10850;Dbxref=GenBank:WP_001001154.1;Name=WP_001001154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459061.1;locus_tag=C9E97_RS10850;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_001001154.1;transl_table=11
NZ_PYKA01000076.1	RefSeq	gene	782	2122	.	-	.	ID=gene-C9E97_RS10855;Name=citS;gbkey=Gene;gene=citS;gene_biotype=protein_coding;locus_tag=C9E97_RS10855;old_locus_tag=C9E97_11105
NZ_PYKA01000076.1	Protein Homology	CDS	782	2122	.	-	0	ID=cds-WP_000183602.1;Parent=gene-C9E97_RS10855;Dbxref=GenBank:WP_000183602.1;Name=WP_000183602.1;Ontology_term=GO:0006101,GO:0006814,GO:0008514,GO:0015293;gbkey=CDS;gene=citS;go_function=organic anion transmembrane transporter activity|0008514||IEA,symporter activity|0015293||IEA;go_process=citrate metabolic process|0006101||IEA,sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459062.1;locus_tag=C9E97_RS10855;product=citrate/sodium symporter CitS;protein_id=WP_000183602.1;transl_table=11
NZ_PYKA01000076.1	RefSeq	gene	2367	3410	.	+	.	ID=gene-C9E97_RS10860;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=C9E97_RS10860;old_locus_tag=C9E97_11110
NZ_PYKA01000076.1	Protein Homology	CDS	2367	3410	.	+	0	ID=cds-WP_072095630.1;Parent=gene-C9E97_RS10860;Dbxref=GenBank:WP_072095630.1;Name=WP_072095630.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459063.1;locus_tag=C9E97_RS10860;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_072095630.1;transl_table=11
NZ_PYKA01000076.1	RefSeq	gene	3440	3733	.	+	.	ID=gene-C9E97_RS10865;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=C9E97_RS10865;old_locus_tag=C9E97_11115
NZ_PYKA01000076.1	Protein Homology	CDS	3440	3733	.	+	0	ID=cds-WP_000691461.1;Parent=gene-C9E97_RS10865;Dbxref=GenBank:WP_000691461.1;Name=WP_000691461.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459064.1;locus_tag=C9E97_RS10865;product=citrate lyase acyl carrier protein;protein_id=WP_000691461.1;transl_table=11
NZ_PYKA01000076.1	RefSeq	gene	3730	4599	.	+	.	ID=gene-C9E97_RS10870;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=C9E97_RS10870;old_locus_tag=C9E97_11120
NZ_PYKA01000076.1	Protein Homology	CDS	3730	4599	.	+	0	ID=cds-WP_001247811.1;Parent=gene-C9E97_RS10870;Dbxref=GenBank:WP_001247811.1;Name=WP_001247811.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459065.1;locus_tag=C9E97_RS10870;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_001247811.1;transl_table=11
NZ_PYKA01000076.1	RefSeq	gene	4610	6130	.	+	.	ID=gene-C9E97_RS10875;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=C9E97_RS10875;old_locus_tag=C9E97_11125
NZ_PYKA01000076.1	Protein Homology	CDS	4610	6130	.	+	0	ID=cds-WP_000665575.1;Parent=gene-C9E97_RS10875;Dbxref=GenBank:WP_000665575.1;Name=WP_000665575.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459066.1;locus_tag=C9E97_RS10875;product=citrate lyase subunit alpha;protein_id=WP_000665575.1;transl_table=11
NZ_PYKA01000076.1	RefSeq	gene	6130	6681	.	+	.	ID=gene-C9E97_RS10880;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=C9E97_RS10880;old_locus_tag=C9E97_11130
NZ_PYKA01000076.1	Protein Homology	CDS	6130	6681	.	+	0	ID=cds-WP_135369436.1;Parent=gene-C9E97_RS10880;Dbxref=GenBank:WP_135369436.1;Name=WP_135369436.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459067.1;locus_tag=C9E97_RS10880;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_135369436.1;transl_table=11
NZ_PYKA01000076.1	RefSeq	gene	6659	7567	.	+	.	ID=gene-C9E97_RS10885;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=C9E97_RS10885;old_locus_tag=C9E97_11135
NZ_PYKA01000076.1	Protein Homology	CDS	6659	7567	.	+	0	ID=cds-WP_000117014.1;Parent=gene-C9E97_RS10885;Dbxref=GenBank:WP_000117014.1;Name=WP_000117014.1;Ontology_term=GO:0016310,GO:0019361,GO:0005524,GO:0046917;gbkey=CDS;gene=citG;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA,2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|0019361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459068.1;locus_tag=C9E97_RS10885;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_000117014.1;transl_table=11
NZ_PYKA01000076.1	RefSeq	gene	7747	8568	.	+	.	ID=gene-C9E97_RS10890;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=C9E97_RS10890;old_locus_tag=C9E97_11140
NZ_PYKA01000076.1	Protein Homology	CDS	7747	8568	.	+	0	ID=cds-WP_000544032.1;Parent=gene-C9E97_RS10890;Dbxref=GenBank:WP_000544032.1;Name=WP_000544032.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459069.1;locus_tag=C9E97_RS10890;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_000544032.1;transl_table=11
##sequence-region NZ_PYKA01000119.1 1 8027
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000119.1	RefSeq	region	1	8027	.	+	.	ID=NZ_PYKA01000119.1:1..8027;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000119.1	RefSeq	pseudogene	1	1655	.	+	.	ID=gene-C9E97_RS18720;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=pseudogene;locus_tag=C9E97_RS18720;old_locus_tag=C9E97_19135;partial=true;pseudo=true;start_range=.,1
NZ_PYKA01000119.1	Protein Homology	CDS	1	1655	.	+	2	ID=cds-C9E97_RS18720;Parent=gene-C9E97_RS18720;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=ftsK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=C9E97_RS18720;partial=true;product=DNA translocase FtsK;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKA01000119.1	RefSeq	gene	1798	2409	.	+	.	ID=gene-C9E97_RS18725;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=C9E97_RS18725;old_locus_tag=C9E97_19140
NZ_PYKA01000119.1	Protein Homology	CDS	1798	2409	.	+	0	ID=cds-WP_001519746.1;Parent=gene-C9E97_RS18725;Dbxref=GenBank:WP_001519746.1;Name=WP_001519746.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=C9E97_RS18725;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_001519746.1;transl_table=11
NZ_PYKA01000119.1	RefSeq	gene	2419	3762	.	+	.	ID=gene-C9E97_RS18730;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=C9E97_RS18730;old_locus_tag=C9E97_19145
NZ_PYKA01000119.1	Protein Homology	CDS	2419	3762	.	+	0	ID=cds-WP_000067785.1;Parent=gene-C9E97_RS18730;Dbxref=GenBank:WP_000067785.1;Name=WP_000067785.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459938.1;locus_tag=C9E97_RS18730;product=replication-associated recombination protein RarA;protein_id=WP_000067785.1;transl_table=11
NZ_PYKA01000119.1	RefSeq	gene	4021	5313	.	+	.	ID=gene-C9E97_RS18735;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=C9E97_RS18735;old_locus_tag=C9E97_19155
NZ_PYKA01000119.1	Protein Homology	CDS	4021	5313	.	+	0	ID=cds-WP_000886697.1;Parent=gene-C9E97_RS18735;Dbxref=GenBank:WP_000886697.1;Name=WP_000886697.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=C9E97_RS18735;product=serine--tRNA ligase;protein_id=WP_000886697.1;transl_table=11
NZ_PYKA01000119.1	RefSeq	gene	5549	7993	.	+	.	ID=gene-C9E97_RS18740;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=C9E97_RS18740;old_locus_tag=C9E97_19160
NZ_PYKA01000119.1	Protein Homology	CDS	5549	7993	.	+	0	ID=cds-WP_023209544.1;Parent=gene-C9E97_RS18740;Dbxref=GenBank:WP_023209544.1;Name=WP_023209544.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459940.1;locus_tag=C9E97_RS18740;product=dimethylsulfoxide reductase subunit A;protein_id=WP_023209544.1;transl_table=11
##sequence-region NZ_PYKA01000098.1 1 7368
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000098.1	RefSeq	region	1	7368	.	+	.	ID=NZ_PYKA01000098.1:1..7368;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000098.1	RefSeq	pseudogene	177	432	.	-	.	ID=gene-C9E97_RS13795;Name=C9E97_RS13795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS13795;old_locus_tag=C9E97_14095;partial=true;pseudo=true;start_range=.,177
NZ_PYKA01000098.1	Protein Homology	CDS	177	432	.	-	0	ID=cds-C9E97_RS13795;Parent=gene-C9E97_RS13795;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=C9E97_RS13795;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,177;transl_table=11
NZ_PYKA01000098.1	RefSeq	pseudogene	1072	1182	.	+	.	ID=gene-C9E97_RS23805;Name=C9E97_RS23805;end_range=1182,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23805;partial=true;pseudo=true
NZ_PYKA01000098.1	Protein Homology	CDS	1072	1182	.	+	0	ID=cds-C9E97_RS23805;Parent=gene-C9E97_RS23805;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1182,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539895.1;locus_tag=C9E97_RS23805;partial=true;product=transposase;pseudo=true;transl_table=11
NZ_PYKA01000098.1	RefSeq	gene	1939	2556	.	+	.	ID=gene-C9E97_RS13800;Name=C9E97_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13800;old_locus_tag=C9E97_14100
NZ_PYKA01000098.1	Protein Homology	CDS	1939	2556	.	+	0	ID=cds-WP_000984812.1;Parent=gene-C9E97_RS13800;Dbxref=GenBank:WP_000984812.1;Name=WP_000984812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462655.1;locus_tag=C9E97_RS13800;product=helix-turn-helix transcriptional regulator;protein_id=WP_000984812.1;transl_table=11
NZ_PYKA01000098.1	RefSeq	gene	2631	5483	.	+	.	ID=gene-C9E97_RS13805;Name=misL;gbkey=Gene;gene=misL;gene_biotype=protein_coding;locus_tag=C9E97_RS13805;old_locus_tag=C9E97_14105
NZ_PYKA01000098.1	Protein Homology	CDS	2631	5483	.	+	0	ID=cds-WP_135369317.1;Parent=gene-C9E97_RS13805;Dbxref=GenBank:WP_135369317.1;Name=WP_135369317.1;gbkey=CDS;gene=misL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462656.1;locus_tag=C9E97_RS13805;product=intestinal colonization autotransporter adhesin MisL;protein_id=WP_135369317.1;transl_table=11
NZ_PYKA01000098.1	RefSeq	gene	5578	6042	.	-	.	ID=gene-C9E97_RS13810;Name=C9E97_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13810;old_locus_tag=C9E97_14110
NZ_PYKA01000098.1	Protein Homology	CDS	5578	6042	.	-	0	ID=cds-WP_001521985.1;Parent=gene-C9E97_RS13810;Dbxref=GenBank:WP_001521985.1;Name=WP_001521985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462657.1;locus_tag=C9E97_RS13810;product=hypothetical protein;protein_id=WP_001521985.1;transl_table=11
NZ_PYKA01000098.1	RefSeq	gene	6053	6910	.	-	.	ID=gene-C9E97_RS13815;Name=C9E97_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13815;old_locus_tag=C9E97_14115
NZ_PYKA01000098.1	Protein Homology	CDS	6053	6910	.	-	0	ID=cds-WP_135369318.1;Parent=gene-C9E97_RS13815;Dbxref=GenBank:WP_135369318.1;Name=WP_135369318.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462658.4;locus_tag=C9E97_RS13815;product=winged helix-turn-helix domain-containing protein;protein_id=WP_135369318.1;transl_table=11
##sequence-region NZ_PYKA01000004.1 1 7186
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000004.1	RefSeq	region	1	7186	.	+	.	ID=NZ_PYKA01000004.1:1..7186;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000004.1	RefSeq	gene	83	224	.	-	.	ID=gene-C9E97_RS00155;Name=C9E97_RS00155;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9E97_RS00155;old_locus_tag=C9E97_00160
NZ_PYKA01000004.1	cmsearch	ncRNA	83	224	.	-	.	ID=rna-C9E97_RS00155;Parent=gene-C9E97_RS00155;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS00155;product=RtT sRNA
NZ_PYKA01000004.1	cmsearch	exon	83	224	.	-	.	ID=exon-C9E97_RS00155-1;Parent=rna-C9E97_RS00155;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=C9E97_RS00155;product=RtT sRNA
NZ_PYKA01000004.1	RefSeq	gene	395	1237	.	-	.	ID=gene-C9E97_RS00160;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=C9E97_RS00160;old_locus_tag=C9E97_00165
NZ_PYKA01000004.1	Protein Homology	CDS	395	1237	.	-	0	ID=cds-WP_001191156.1;Parent=gene-C9E97_RS00160;Dbxref=GenBank:WP_001191156.1;Name=WP_001191156.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460715.1;locus_tag=C9E97_RS00160;product=formyltetrahydrofolate deformylase;protein_id=WP_001191156.1;transl_table=11
NZ_PYKA01000004.1	RefSeq	gene	1288	1746	.	-	.	ID=gene-C9E97_RS00165;Name=C9E97_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00165;old_locus_tag=C9E97_00170
NZ_PYKA01000004.1	Protein Homology	CDS	1288	1746	.	-	0	ID=cds-WP_001540172.1;Parent=gene-C9E97_RS00165;Dbxref=GenBank:WP_001540172.1;Name=WP_001540172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460714.1;locus_tag=C9E97_RS00165;product=YchJ family protein;protein_id=WP_001540172.1;transl_table=11
NZ_PYKA01000004.1	RefSeq	gene	1857	2762	.	+	.	ID=gene-C9E97_RS00170;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=C9E97_RS00170;old_locus_tag=C9E97_00175
NZ_PYKA01000004.1	Protein Homology	CDS	1857	2762	.	+	0	ID=cds-WP_001230575.1;Parent=gene-C9E97_RS00170;Dbxref=GenBank:WP_001230575.1;Name=WP_001230575.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460713.1;locus_tag=C9E97_RS00170;product=patatin-like phospholipase RssA;protein_id=WP_001230575.1;transl_table=11
NZ_PYKA01000004.1	RefSeq	gene	2853	3866	.	+	.	ID=gene-C9E97_RS00175;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=C9E97_RS00175;old_locus_tag=C9E97_00180
NZ_PYKA01000004.1	Protein Homology	CDS	2853	3866	.	+	0	ID=cds-WP_000193432.1;Parent=gene-C9E97_RS00175;Dbxref=GenBank:WP_000193432.1;Name=WP_000193432.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460712.1;locus_tag=C9E97_RS00175;product=two-component system response regulator RssB;protein_id=WP_000193432.1;transl_table=11
NZ_PYKA01000004.1	RefSeq	gene	4069	4977	.	+	.	ID=gene-C9E97_RS00180;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=C9E97_RS00180;old_locus_tag=C9E97_00185
NZ_PYKA01000004.1	Protein Homology	CDS	4069	4977	.	+	0	ID=cds-WP_135369082.1;Parent=gene-C9E97_RS00180;Dbxref=GenBank:WP_135369082.1;Name=WP_135369082.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460711.1;locus_tag=C9E97_RS00180;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_135369082.1;transl_table=11
NZ_PYKA01000004.1	RefSeq	gene	5109	5522	.	-	.	ID=gene-C9E97_RS00185;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=C9E97_RS00185;old_locus_tag=C9E97_00190
NZ_PYKA01000004.1	Protein Homology	CDS	5109	5522	.	-	0	ID=cds-WP_001287383.1;Parent=gene-C9E97_RS00185;Dbxref=GenBank:WP_001287383.1;Name=WP_001287383.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460710.1;locus_tag=C9E97_RS00185;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_001287383.1;transl_table=11
NZ_PYKA01000004.1	RefSeq	gene	6185	6802	.	+	.	ID=gene-C9E97_RS00190;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=C9E97_RS00190;old_locus_tag=C9E97_00195
NZ_PYKA01000004.1	Protein Homology	CDS	6185	6802	.	+	0	ID=cds-WP_000068097.1;Parent=gene-C9E97_RS00190;Dbxref=GenBank:WP_000068097.1;Name=WP_000068097.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460709.1;locus_tag=C9E97_RS00190;product=thymidine kinase;protein_id=WP_000068097.1;transl_table=11
NZ_PYKA01000004.1	RefSeq	gene	6999	7186	.	-	.	ID=gene-C9E97_RS00195;Name=C9E97_RS00195;end_range=7186,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS00195;old_locus_tag=C9E97_00200;partial=true
NZ_PYKA01000004.1	Protein Homology	CDS	6999	7186	.	-	2	ID=cds-WP_135369081.1;Parent=gene-C9E97_RS00195;Dbxref=GenBank:WP_135369081.1;Name=WP_135369081.1;end_range=7186,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=C9E97_RS00195;partial=true;product=hypothetical protein;protein_id=WP_135369081.1;transl_table=11
##sequence-region NZ_PYKA01000099.1 1 6559
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000099.1	RefSeq	region	1	6559	.	+	.	ID=NZ_PYKA01000099.1:1..6559;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000099.1	RefSeq	gene	147	1145	.	+	.	ID=gene-C9E97_RS13825;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=C9E97_RS13825;old_locus_tag=C9E97_14125
NZ_PYKA01000099.1	Protein Homology	CDS	147	1145	.	+	0	ID=cds-WP_021000516.1;Parent=gene-C9E97_RS13825;Dbxref=GenBank:WP_021000516.1;Name=WP_021000516.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461135.1;locus_tag=C9E97_RS13825;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_021000516.1;transl_table=11
NZ_PYKA01000099.1	RefSeq	gene	1279	2799	.	+	.	ID=gene-C9E97_RS13830;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=C9E97_RS13830;old_locus_tag=C9E97_14130
NZ_PYKA01000099.1	Protein Homology	CDS	1279	2799	.	+	0	ID=cds-WP_079943696.1;Parent=gene-C9E97_RS13830;Dbxref=GenBank:WP_079943696.1;Name=WP_079943696.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=C9E97_RS13830;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_079943696.1;transl_table=11
NZ_PYKA01000099.1	RefSeq	gene	2815	3825	.	+	.	ID=gene-C9E97_RS13835;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=C9E97_RS13835;old_locus_tag=C9E97_14135
NZ_PYKA01000099.1	Protein Homology	CDS	2815	3825	.	+	0	ID=cds-WP_001275101.1;Parent=gene-C9E97_RS13835;Dbxref=GenBank:WP_001275101.1;Name=WP_001275101.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=C9E97_RS13835;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_001275101.1;transl_table=11
NZ_PYKA01000099.1	RefSeq	gene	3900	5135	.	-	.	ID=gene-C9E97_RS13840;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=C9E97_RS13840;old_locus_tag=C9E97_14140
NZ_PYKA01000099.1	Protein Homology	CDS	3900	5135	.	-	0	ID=cds-WP_080193537.1;Parent=gene-C9E97_RS13840;Dbxref=GenBank:WP_080193537.1;Name=WP_080193537.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=C9E97_RS13840;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_080193537.1;transl_table=11
NZ_PYKA01000099.1	RefSeq	gene	5129	6370	.	-	.	ID=gene-C9E97_RS13845;Name=C9E97_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS13845;old_locus_tag=C9E97_14145
NZ_PYKA01000099.1	Protein Homology	CDS	5129	6370	.	-	0	ID=cds-WP_001660461.1;Parent=gene-C9E97_RS13845;Dbxref=GenBank:WP_001660461.1;Name=WP_001660461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461131.1;locus_tag=C9E97_RS13845;product=NAD(P)-dependent oxidoreductase;protein_id=WP_001660461.1;transl_table=11
##sequence-region NZ_PYKA01000131.1 1 6421
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000131.1	RefSeq	region	1	6421	.	+	.	ID=NZ_PYKA01000131.1:1..6421;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000131.1	RefSeq	pseudogene	1	251	.	+	.	ID=gene-C9E97_RS21145;Name=C9E97_RS21145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS21145;old_locus_tag=C9E97_21640;partial=true;pseudo=true;start_range=.,1
NZ_PYKA01000131.1	Protein Homology	CDS	1	251	.	+	2	ID=cds-C9E97_RS21145;Parent=gene-C9E97_RS21145;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461178.1;locus_tag=C9E97_RS21145;partial=true;product=phage tail protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKA01000131.1	RefSeq	gene	254	772	.	+	.	ID=gene-C9E97_RS21150;Name=C9E97_RS21150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21150;old_locus_tag=C9E97_21645
NZ_PYKA01000131.1	Protein Homology	CDS	254	772	.	+	0	ID=cds-WP_080198124.1;Parent=gene-C9E97_RS21150;Dbxref=GenBank:WP_080198124.1;Name=WP_080198124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006675316.1;locus_tag=C9E97_RS21150;product=tail fiber assembly protein;protein_id=WP_080198124.1;transl_table=11
NZ_PYKA01000131.1	RefSeq	gene	847	1089	.	-	.	ID=gene-C9E97_RS21155;Name=C9E97_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21155;old_locus_tag=C9E97_21650
NZ_PYKA01000131.1	Protein Homology	CDS	847	1089	.	-	0	ID=cds-WP_080198125.1;Parent=gene-C9E97_RS21155;Dbxref=GenBank:WP_080198125.1;Name=WP_080198125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003840043.1;locus_tag=C9E97_RS21155;product=DinI-like family protein;protein_id=WP_080198125.1;transl_table=11
NZ_PYKA01000131.1	RefSeq	gene	1167	1586	.	+	.	ID=gene-C9E97_RS21160;Name=C9E97_RS21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21160;old_locus_tag=C9E97_21655
NZ_PYKA01000131.1	Protein Homology	CDS	1167	1586	.	+	0	ID=cds-WP_080198126.1;Parent=gene-C9E97_RS21160;Dbxref=GenBank:WP_080198126.1;Name=WP_080198126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460949.1;locus_tag=C9E97_RS21160;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_080198126.1;transl_table=11
NZ_PYKA01000131.1	RefSeq	gene	1588	2856	.	+	.	ID=gene-C9E97_RS21165;Name=C9E97_RS21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21165;old_locus_tag=C9E97_21660
NZ_PYKA01000131.1	Protein Homology	CDS	1588	2856	.	+	0	ID=cds-WP_135369587.1;Parent=gene-C9E97_RS21165;Dbxref=GenBank:WP_135369587.1;Name=WP_135369587.1;Ontology_term=GO:0006974,GO:0009432,GO:0019985,GO:0042276,GO:0003684,GO:0003887;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA damage response|0006974||IEA,SOS response|0009432||IEA,translesion synthesis|0019985||IEA,error-prone translesion synthesis|0042276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415702.1;locus_tag=C9E97_RS21165;product=Y-family DNA polymerase;protein_id=WP_135369587.1;transl_table=11
NZ_PYKA01000131.1	RefSeq	gene	2829	3299	.	-	.	ID=gene-C9E97_RS21170;Name=C9E97_RS21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21170;old_locus_tag=C9E97_21665
NZ_PYKA01000131.1	Protein Homology	CDS	2829	3299	.	-	0	ID=cds-WP_134949631.1;Parent=gene-C9E97_RS21170;Dbxref=GenBank:WP_134949631.1;Name=WP_134949631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000374058.1;locus_tag=C9E97_RS21170;product=hypothetical protein;protein_id=WP_134949631.1;transl_table=11
NZ_PYKA01000131.1	RefSeq	gene	3318	3989	.	-	.	ID=gene-C9E97_RS21175;Name=C9E97_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS21175;old_locus_tag=C9E97_21670
NZ_PYKA01000131.1	Protein Homology	CDS	3318	3989	.	-	0	ID=cds-WP_134949632.1;Parent=gene-C9E97_RS21175;Dbxref=GenBank:WP_134949632.1;Name=WP_134949632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807727.1;locus_tag=C9E97_RS21175;product=SOS response-associated peptidase;protein_id=WP_134949632.1;transl_table=11
NZ_PYKA01000131.1	RefSeq	pseudogene	4288	4455	.	+	.	ID=gene-C9E97_RS21180;Name=C9E97_RS21180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS21180;old_locus_tag=C9E97_21675;partial=true;pseudo=true;start_range=.,4288
NZ_PYKA01000131.1	Protein Homology	CDS	4288	4455	.	+	0	ID=cds-C9E97_RS21180;Parent=gene-C9E97_RS21180;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=C9E97_RS21180;partial=true;product=isocitrate/isopropylmalate family dehydrogenase;pseudo=true;start_range=.,4288;transl_table=11
NZ_PYKA01000131.1	RefSeq	gene	4915	6039	.	+	.	ID=gene-C9E97_RS21185;Name=sopF;gbkey=Gene;gene=sopF;gene_biotype=protein_coding;locus_tag=C9E97_RS21185;old_locus_tag=C9E97_21680
NZ_PYKA01000131.1	Protein Homology	CDS	4915	6039	.	+	0	ID=cds-WP_135369588.1;Parent=gene-C9E97_RS21185;Dbxref=GenBank:WP_135369588.1;Name=WP_135369588.1;gbkey=CDS;gene=sopF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460209.1;locus_tag=C9E97_RS21185;product=type III secretion system effector SopF;protein_id=WP_135369588.1;transl_table=11
NZ_PYKA01000131.1	RefSeq	pseudogene	6160	6225	.	+	.	ID=gene-C9E97_RS24130;Name=C9E97_RS24130;end_range=6225,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS24130;partial=true;pseudo=true;start_range=.,6160
NZ_PYKA01000131.1	Protein Homology	CDS	6160	6225	.	+	0	ID=cds-C9E97_RS24130;Parent=gene-C9E97_RS24130;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=6225,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264264.1;locus_tag=C9E97_RS24130;partial=true;product=phage tail protein;pseudo=true;start_range=.,6160;transl_table=11
NZ_PYKA01000131.1	RefSeq	pseudogene	6332	6421	.	-	.	ID=gene-C9E97_RS23895;Name=C9E97_RS23895;end_range=6421,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS23895;partial=true;pseudo=true;start_range=.,6332
NZ_PYKA01000131.1	Protein Homology	CDS	6332	6421	.	-	0	ID=cds-C9E97_RS23895;Parent=gene-C9E97_RS23895;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=6421,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=C9E97_RS23895;partial=true;product=hypothetical protein;pseudo=true;start_range=.,6332;transl_table=11
##sequence-region NZ_PYKA01000026.1 1 6373
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000026.1	RefSeq	region	1	6373	.	+	.	ID=NZ_PYKA01000026.1:1..6373;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000026.1	RefSeq	gene	76	678	.	-	.	ID=gene-C9E97_RS03270;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=C9E97_RS03270;old_locus_tag=C9E97_03370
NZ_PYKA01000026.1	Protein Homology	CDS	76	678	.	-	0	ID=cds-WP_000431778.1;Parent=gene-C9E97_RS03270;Dbxref=GenBank:WP_000431778.1;Name=WP_000431778.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461198.1;locus_tag=C9E97_RS03270;product=cytochrome c-type protein NapC;protein_id=WP_000431778.1;transl_table=11
NZ_PYKA01000026.1	RefSeq	gene	688	1137	.	-	.	ID=gene-C9E97_RS03275;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=C9E97_RS03275;old_locus_tag=C9E97_03375
NZ_PYKA01000026.1	Protein Homology	CDS	688	1137	.	-	0	ID=cds-WP_000835182.1;Parent=gene-C9E97_RS03275;Dbxref=GenBank:WP_000835182.1;Name=WP_000835182.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461199.1;locus_tag=C9E97_RS03275;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_000835182.1;transl_table=11
NZ_PYKA01000026.1	RefSeq	gene	1253	2122	.	-	.	ID=gene-C9E97_RS03280;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=C9E97_RS03280;old_locus_tag=C9E97_03385
NZ_PYKA01000026.1	Protein Homology	CDS	1253	2122	.	-	0	ID=cds-WP_135369222.1;Parent=gene-C9E97_RS03280;Dbxref=GenBank:WP_135369222.1;Name=WP_135369222.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461200.1;locus_tag=C9E97_RS03280;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_135369222.1;transl_table=11
NZ_PYKA01000026.1	RefSeq	gene	2109	2804	.	-	.	ID=gene-C9E97_RS03285;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=C9E97_RS03285;old_locus_tag=C9E97_03390
NZ_PYKA01000026.1	Protein Homology	CDS	2109	2804	.	-	0	ID=cds-WP_000091673.1;Parent=gene-C9E97_RS03285;Dbxref=GenBank:WP_000091673.1;Name=WP_000091673.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461201.1;locus_tag=C9E97_RS03285;product=ferredoxin-type protein NapG;protein_id=WP_000091673.1;transl_table=11
NZ_PYKA01000026.1	RefSeq	gene	2811	5297	.	-	.	ID=gene-C9E97_RS03290;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=C9E97_RS03290;old_locus_tag=C9E97_03395
NZ_PYKA01000026.1	Protein Homology	CDS	2811	5297	.	-	0	ID=cds-WP_000778097.1;Parent=gene-C9E97_RS03290;Dbxref=GenBank:WP_000778097.1;Name=WP_000778097.1;Ontology_term=GO:0008940,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;gene=napA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461202.1;locus_tag=C9E97_RS03290;product=nitrate reductase catalytic subunit NapA;protein_id=WP_000778097.1;transl_table=11
NZ_PYKA01000026.1	RefSeq	gene	5294	5557	.	-	.	ID=gene-C9E97_RS03295;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=C9E97_RS03295;old_locus_tag=C9E97_03400
NZ_PYKA01000026.1	Protein Homology	CDS	5294	5557	.	-	0	ID=cds-WP_001260058.1;Parent=gene-C9E97_RS03295;Dbxref=GenBank:WP_001260058.1;Name=WP_001260058.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461203.1;locus_tag=C9E97_RS03295;product=chaperone NapD;protein_id=WP_001260058.1;transl_table=11
NZ_PYKA01000026.1	RefSeq	gene	5547	6038	.	-	.	ID=gene-C9E97_RS03300;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=C9E97_RS03300;old_locus_tag=C9E97_03405
NZ_PYKA01000026.1	Protein Homology	CDS	5547	6038	.	-	0	ID=cds-WP_000228066.1;Parent=gene-C9E97_RS03300;Dbxref=GenBank:WP_000228066.1;Name=WP_000228066.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461204.1;locus_tag=C9E97_RS03300;product=ferredoxin-type protein NapF;protein_id=WP_000228066.1;transl_table=11
##sequence-region NZ_PYKA01000123.1 1 6291
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000123.1	RefSeq	region	1	6291	.	+	.	ID=NZ_PYKA01000123.1:1..6291;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000123.1	RefSeq	gene	22	1065	.	-	.	ID=gene-C9E97_RS19860;Name=C9E97_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19860;old_locus_tag=C9E97_20330
NZ_PYKA01000123.1	Protein Homology	CDS	22	1065	.	-	0	ID=cds-WP_135490109.1;Parent=gene-C9E97_RS19860;Dbxref=GenBank:WP_135490109.1;Name=WP_135490109.1;Ontology_term=GO:0017004,GO:0015035,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=protein-disulfide reductase activity|0015035||IEA,metal ion binding|0046872||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=C9E97_RS19860;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_135490109.1;transl_table=11
NZ_PYKA01000123.1	RefSeq	gene	1062	1619	.	-	.	ID=gene-C9E97_RS19865;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=C9E97_RS19865;old_locus_tag=C9E97_20335
NZ_PYKA01000123.1	Protein Homology	CDS	1062	1619	.	-	0	ID=cds-WP_000828295.1;Parent=gene-C9E97_RS19865;Dbxref=GenBank:WP_000828295.1;Name=WP_000828295.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=C9E97_RS19865;product=thiol:disulfide interchange protein DsbE;protein_id=WP_000828295.1;transl_table=11
NZ_PYKA01000123.1	RefSeq	gene	1616	3547	.	-	.	ID=gene-C9E97_RS19870;Name=C9E97_RS19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19870;old_locus_tag=C9E97_20340
NZ_PYKA01000123.1	Protein Homology	CDS	1616	3547	.	-	0	ID=cds-WP_023201831.1;Parent=gene-C9E97_RS19870;Dbxref=GenBank:WP_023201831.1;Name=WP_023201831.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=C9E97_RS19870;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_023201831.1;transl_table=11
NZ_PYKA01000123.1	RefSeq	gene	3544	4023	.	-	.	ID=gene-C9E97_RS19875;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=C9E97_RS19875;old_locus_tag=C9E97_20345
NZ_PYKA01000123.1	Protein Homology	CDS	3544	4023	.	-	0	ID=cds-WP_001053600.1;Parent=gene-C9E97_RS19875;Dbxref=GenBank:WP_001053600.1;Name=WP_001053600.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=C9E97_RS19875;product=cytochrome c maturation protein CcmE;protein_id=WP_001053600.1;transl_table=11
NZ_PYKA01000123.1	RefSeq	gene	4020	4232	.	-	.	ID=gene-C9E97_RS19880;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=C9E97_RS19880;old_locus_tag=C9E97_20350
NZ_PYKA01000123.1	Protein Homology	CDS	4020	4232	.	-	0	ID=cds-WP_000074110.1;Parent=gene-C9E97_RS19880;Dbxref=GenBank:WP_000074110.1;Name=WP_000074110.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=C9E97_RS19880;product=heme exporter protein CcmD;protein_id=WP_000074110.1;transl_table=11
NZ_PYKA01000123.1	RefSeq	gene	4229	4966	.	-	.	ID=gene-C9E97_RS19885;Name=C9E97_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS19885;old_locus_tag=C9E97_20355
NZ_PYKA01000123.1	Protein Homology	CDS	4229	4966	.	-	0	ID=cds-WP_000265995.1;Parent=gene-C9E97_RS19885;Dbxref=GenBank:WP_000265995.1;Name=WP_000265995.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=C9E97_RS19885;product=heme ABC transporter permease;protein_id=WP_000265995.1;transl_table=11
NZ_PYKA01000123.1	RefSeq	gene	5018	5677	.	-	.	ID=gene-C9E97_RS19890;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=C9E97_RS19890;old_locus_tag=C9E97_20360
NZ_PYKA01000123.1	Protein Homology	CDS	5018	5677	.	-	0	ID=cds-WP_020838447.1;Parent=gene-C9E97_RS19890;Dbxref=GenBank:WP_020838447.1;Name=WP_020838447.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=C9E97_RS19890;product=heme exporter protein CcmB;protein_id=WP_020838447.1;transl_table=11
NZ_PYKA01000123.1	RefSeq	gene	5674	6291	.	-	.	ID=gene-C9E97_RS19895;Name=ccmA;end_range=6291,.;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=C9E97_RS19895;old_locus_tag=C9E97_20365;partial=true
NZ_PYKA01000123.1	Protein Homology	CDS	5674	6291	.	-	0	ID=cds-WP_000888526.1;Parent=gene-C9E97_RS19895;Dbxref=GenBank:WP_000888526.1;Name=WP_000888526.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;end_range=6291,.;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=C9E97_RS19895;partial=true;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_000888526.1;transl_table=11
##sequence-region NZ_PYKA01000111.1 1 6081
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000111.1	RefSeq	region	1	6081	.	+	.	ID=NZ_PYKA01000111.1:1..6081;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000111.1	RefSeq	pseudogene	1	502	.	+	.	ID=gene-C9E97_RS16400;Name=C9E97_RS16400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS16400;partial=true;pseudo=true;start_range=.,1
NZ_PYKA01000111.1	Protein Homology	CDS	1	502	.	+	1	ID=cds-C9E97_RS16400;Parent=gene-C9E97_RS16400;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406820.1;locus_tag=C9E97_RS16400;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PYKA01000111.1	RefSeq	gene	505	1362	.	+	.	ID=gene-C9E97_RS16405;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=C9E97_RS16405;old_locus_tag=C9E97_16770
NZ_PYKA01000111.1	Protein Homology	CDS	505	1362	.	+	0	ID=cds-WP_000398249.1;Parent=gene-C9E97_RS16405;Dbxref=GenBank:WP_000398249.1;Name=WP_000398249.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462983.1;locus_tag=C9E97_RS16405;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000398249.1;transl_table=11
NZ_PYKA01000111.1	RefSeq	gene	1478	3910	.	-	.	ID=gene-C9E97_RS16410;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;locus_tag=C9E97_RS16410;old_locus_tag=C9E97_16775
NZ_PYKA01000111.1	Protein Homology	CDS	1478	3910	.	-	0	ID=cds-WP_000110811.1;Parent=gene-C9E97_RS16410;Dbxref=GenBank:WP_000110811.1;Name=WP_000110811.1;gbkey=CDS;gene=metL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=C9E97_RS16410;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_000110811.1;transl_table=11
NZ_PYKA01000111.1	RefSeq	gene	3913	5073	.	-	.	ID=gene-C9E97_RS16415;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=C9E97_RS16415;old_locus_tag=C9E97_16780
NZ_PYKA01000111.1	Protein Homology	CDS	3913	5073	.	-	0	ID=cds-WP_000197216.1;Parent=gene-C9E97_RS16415;Dbxref=GenBank:WP_000197216.1;Name=WP_000197216.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462981.1;locus_tag=C9E97_RS16415;product=cystathionine gamma-synthase;protein_id=WP_000197216.1;transl_table=11
NZ_PYKA01000111.1	RefSeq	gene	5338	5655	.	+	.	ID=gene-C9E97_RS16420;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=C9E97_RS16420;old_locus_tag=C9E97_16785
NZ_PYKA01000111.1	Protein Homology	CDS	5338	5655	.	+	0	ID=cds-WP_000852811.1;Parent=gene-C9E97_RS16420;Dbxref=GenBank:WP_000852811.1;Name=WP_000852811.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=C9E97_RS16420;product=met regulon transcriptional regulator MetJ;protein_id=WP_000852811.1;transl_table=11
##sequence-region NZ_PYKA01000120.1 1 4305
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000120.1	RefSeq	region	1	4305	.	+	.	ID=NZ_PYKA01000120.1:1..4305;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000120.1	RefSeq	gene	1	190	.	-	.	ID=gene-C9E97_RS18745;Name=C9E97_RS18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18745;old_locus_tag=C9E97_19165;partial=true;start_range=.,1
NZ_PYKA01000120.1	Protein Homology	CDS	1	190	.	-	0	ID=cds-WP_021498352.1-2;Parent=gene-C9E97_RS18745;Dbxref=GenBank:WP_021498352.1;Name=WP_021498352.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=C9E97_RS18745;partial=true;product=GTP-binding protein;protein_id=WP_021498352.1;start_range=.,1;transl_table=11
NZ_PYKA01000120.1	RefSeq	gene	306	381	.	-	.	ID=gene-C9E97_RS18750;Name=C9E97_RS18750;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS18750;old_locus_tag=C9E97_19170
NZ_PYKA01000120.1	tRNAscan-SE	tRNA	306	381	.	-	.	ID=rna-C9E97_RS18750;Parent=gene-C9E97_RS18750;anticodon=(pos:complement(346..348));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS18750;product=tRNA-Thr
NZ_PYKA01000120.1	tRNAscan-SE	exon	306	381	.	-	.	ID=exon-C9E97_RS18750-1;Parent=rna-C9E97_RS18750;anticodon=(pos:complement(346..348));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS18750;product=tRNA-Thr
NZ_PYKA01000120.1	RefSeq	gene	388	462	.	-	.	ID=gene-C9E97_RS18755;Name=C9E97_RS18755;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS18755;old_locus_tag=C9E97_19175
NZ_PYKA01000120.1	tRNAscan-SE	tRNA	388	462	.	-	.	ID=rna-C9E97_RS18755;Parent=gene-C9E97_RS18755;anticodon=(pos:complement(427..429));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS18755;product=tRNA-Gly
NZ_PYKA01000120.1	tRNAscan-SE	exon	388	462	.	-	.	ID=exon-C9E97_RS18755-1;Parent=rna-C9E97_RS18755;anticodon=(pos:complement(427..429));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS18755;product=tRNA-Gly
NZ_PYKA01000120.1	RefSeq	gene	579	663	.	-	.	ID=gene-C9E97_RS18760;Name=C9E97_RS18760;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS18760;old_locus_tag=C9E97_19180
NZ_PYKA01000120.1	tRNAscan-SE	tRNA	579	663	.	-	.	ID=rna-C9E97_RS18760;Parent=gene-C9E97_RS18760;anticodon=(pos:complement(627..629));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS18760;product=tRNA-Tyr
NZ_PYKA01000120.1	tRNAscan-SE	exon	579	663	.	-	.	ID=exon-C9E97_RS18760-1;Parent=rna-C9E97_RS18760;anticodon=(pos:complement(627..629));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS18760;product=tRNA-Tyr
NZ_PYKA01000120.1	RefSeq	gene	672	747	.	-	.	ID=gene-C9E97_RS18765;Name=C9E97_RS18765;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS18765;old_locus_tag=C9E97_19185
NZ_PYKA01000120.1	tRNAscan-SE	tRNA	672	747	.	-	.	ID=rna-C9E97_RS18765;Parent=gene-C9E97_RS18765;anticodon=(pos:complement(712..714));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS18765;product=tRNA-Thr
NZ_PYKA01000120.1	tRNAscan-SE	exon	672	747	.	-	.	ID=exon-C9E97_RS18765-1;Parent=rna-C9E97_RS18765;anticodon=(pos:complement(712..714));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS18765;product=tRNA-Thr
NZ_PYKA01000120.1	RefSeq	gene	767	940	.	+	.	ID=gene-C9E97_RS18770;Name=C9E97_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS18770;old_locus_tag=C9E97_19190
NZ_PYKA01000120.1	Protein Homology	CDS	767	940	.	+	0	ID=cds-WP_001541267.1;Parent=gene-C9E97_RS18770;Dbxref=GenBank:WP_001541267.1;Name=WP_001541267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463014.1;locus_tag=C9E97_RS18770;product=hypothetical protein;protein_id=WP_001541267.1;transl_table=11
NZ_PYKA01000120.1	RefSeq	gene	1149	2099	.	+	.	ID=gene-C9E97_RS18775;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=C9E97_RS18775;old_locus_tag=C9E97_19200
NZ_PYKA01000120.1	Protein Homology	CDS	1149	2099	.	+	0	ID=cds-WP_000023068.1;Parent=gene-C9E97_RS18775;Dbxref=GenBank:WP_000023068.1;Name=WP_000023068.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=C9E97_RS18775;product=type I pantothenate kinase;protein_id=WP_000023068.1;transl_table=11
NZ_PYKA01000120.1	RefSeq	gene	2135	3097	.	-	.	ID=gene-C9E97_RS18780;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=C9E97_RS18780;old_locus_tag=C9E97_19205
NZ_PYKA01000120.1	Protein Homology	CDS	2135	3097	.	-	0	ID=cds-WP_000655746.1;Parent=gene-C9E97_RS18780;Dbxref=GenBank:WP_000655746.1;Name=WP_000655746.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463012.1;locus_tag=C9E97_RS18780;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_000655746.1;transl_table=11
NZ_PYKA01000120.1	RefSeq	gene	3094	4122	.	-	.	ID=gene-C9E97_RS18785;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=C9E97_RS18785;old_locus_tag=C9E97_19210
NZ_PYKA01000120.1	Protein Homology	CDS	3094	4122	.	-	0	ID=cds-WP_135369316.1;Parent=gene-C9E97_RS18785;Dbxref=GenBank:WP_135369316.1;Name=WP_135369316.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463011.1;locus_tag=C9E97_RS18785;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_135369316.1;transl_table=11
##sequence-region NZ_PYKA01000021.1 1 101405
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126
NZ_PYKA01000021.1	RefSeq	region	1	101405	.	+	.	ID=NZ_PYKA01000021.1:1..101405;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;genome=genomic;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35deb;sub-species=enterica
NZ_PYKA01000021.1	RefSeq	gene	1	122	.	+	.	ID=gene-C9E97_RS24025;Name=C9E97_RS24025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS24025;partial=true;start_range=.,1
NZ_PYKA01000021.1	Protein Homology	CDS	1	122	.	+	2	ID=cds-WP_426457366.1;Parent=gene-C9E97_RS24025;Dbxref=GenBank:WP_426457366.1;Name=WP_426457366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920270.1;locus_tag=C9E97_RS24025;partial=true;product=hypothetical protein;protein_id=WP_426457366.1;start_range=.,1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	304	1665	.	+	.	ID=gene-C9E97_RS01985;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=C9E97_RS01985;old_locus_tag=C9E97_02040
NZ_PYKA01000021.1	Protein Homology	CDS	304	1665	.	+	0	ID=cds-WP_000007065.1;Parent=gene-C9E97_RS01985;Dbxref=GenBank:WP_000007065.1;Name=WP_000007065.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459798.1;locus_tag=C9E97_RS01985;product=ATP-dependent RNA helicase RhlE;protein_id=WP_000007065.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	1873	4017	.	+	.	ID=gene-C9E97_RS01990;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=C9E97_RS01990;old_locus_tag=C9E97_02045
NZ_PYKA01000021.1	Protein Homology	CDS	1873	4017	.	+	0	ID=cds-WP_001218630.1;Parent=gene-C9E97_RS01990;Dbxref=GenBank:WP_001218630.1;Name=WP_001218630.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=C9E97_RS01990;product=ATP-dependent DNA helicase DinG;protein_id=WP_001218630.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	4047	5021	.	+	.	ID=gene-C9E97_RS01995;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=C9E97_RS01995;old_locus_tag=C9E97_02050
NZ_PYKA01000021.1	Protein Homology	CDS	4047	5021	.	+	0	ID=cds-WP_135369515.1;Parent=gene-C9E97_RS01995;Dbxref=GenBank:WP_135369515.1;Name=WP_135369515.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459800.1;locus_tag=C9E97_RS01995;product=DNA-binding protein YbiB;protein_id=WP_135369515.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	5177	5437	.	-	.	ID=gene-C9E97_RS02000;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=C9E97_RS02000;old_locus_tag=C9E97_02055
NZ_PYKA01000021.1	Protein Homology	CDS	5177	5437	.	-	0	ID=cds-WP_000849092.1;Parent=gene-C9E97_RS02000;Dbxref=GenBank:WP_000849092.1;Name=WP_000849092.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459801.1;locus_tag=C9E97_RS02000;product=DUF1471 family protein YbiJ;protein_id=WP_000849092.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	5722	5988	.	-	.	ID=gene-C9E97_RS02005;Name=C9E97_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02005;old_locus_tag=C9E97_02060
NZ_PYKA01000021.1	Protein Homology	CDS	5722	5988	.	-	0	ID=cds-WP_000146330.1;Parent=gene-C9E97_RS02005;Dbxref=GenBank:WP_000146330.1;Name=WP_000146330.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459802.1;locus_tag=C9E97_RS02005;product=DksA/TraR family C4-type zinc finger protein;protein_id=WP_000146330.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	6193	7119	.	+	.	ID=gene-C9E97_RS02010;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=C9E97_RS02010;old_locus_tag=C9E97_02065
NZ_PYKA01000021.1	Protein Homology	CDS	6193	7119	.	+	0	ID=cds-WP_001275962.1;Parent=gene-C9E97_RS02010;Dbxref=GenBank:WP_001275962.1;Name=WP_001275962.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459803.1;locus_tag=C9E97_RS02010;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_001275962.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	7116	9338	.	-	.	ID=gene-C9E97_RS02015;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=C9E97_RS02015;old_locus_tag=C9E97_02070
NZ_PYKA01000021.1	Protein Homology	CDS	7116	9338	.	-	0	ID=cds-WP_052931901.1;Parent=gene-C9E97_RS02015;Dbxref=GenBank:WP_052931901.1;Name=WP_052931901.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459804.1;locus_tag=C9E97_RS02015;product=mechanosensitive channel protein;protein_id=WP_052931901.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	9457	10179	.	-	.	ID=gene-C9E97_RS02020;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=C9E97_RS02020;old_locus_tag=C9E97_02075
NZ_PYKA01000021.1	Protein Homology	CDS	9457	10179	.	-	0	ID=cds-WP_000569093.1;Parent=gene-C9E97_RS02020;Dbxref=GenBank:WP_000569093.1;Name=WP_000569093.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=C9E97_RS02020;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_000569093.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	10176	10835	.	-	.	ID=gene-C9E97_RS02025;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=C9E97_RS02025;old_locus_tag=C9E97_02080
NZ_PYKA01000021.1	Protein Homology	CDS	10176	10835	.	-	0	ID=cds-WP_001159076.1;Parent=gene-C9E97_RS02025;Dbxref=GenBank:WP_001159076.1;Name=WP_001159076.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=C9E97_RS02025;product=glutamine ABC transporter permease GlnP;protein_id=WP_001159076.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	10979	11725	.	-	.	ID=gene-C9E97_RS02030;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=C9E97_RS02030;old_locus_tag=C9E97_02085
NZ_PYKA01000021.1	Protein Homology	CDS	10979	11725	.	-	0	ID=cds-WP_000838671.1;Parent=gene-C9E97_RS02030;Dbxref=GenBank:WP_000838671.1;Name=WP_000838671.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=C9E97_RS02030;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_000838671.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	12202	12705	.	-	.	ID=gene-C9E97_RS02035;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=C9E97_RS02035;old_locus_tag=C9E97_02090
NZ_PYKA01000021.1	Protein Homology	CDS	12202	12705	.	-	0	ID=cds-WP_000100805.1;Parent=gene-C9E97_RS02035;Dbxref=GenBank:WP_000100805.1;Name=WP_000100805.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=C9E97_RS02035;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100805.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	13008	13895	.	-	.	ID=gene-C9E97_RS02040;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=C9E97_RS02040;old_locus_tag=C9E97_02095
NZ_PYKA01000021.1	Protein Homology	CDS	13008	13895	.	-	0	ID=cds-WP_058653246.1;Parent=gene-C9E97_RS02040;Dbxref=GenBank:WP_058653246.1;Name=WP_058653246.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459809.1;locus_tag=C9E97_RS02040;product=threonine/homoserine exporter RhtA;protein_id=WP_058653246.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	14249	14764	.	+	.	ID=gene-C9E97_RS02045;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=C9E97_RS02045;old_locus_tag=C9E97_02100
NZ_PYKA01000021.1	Protein Homology	CDS	14249	14764	.	+	0	ID=cds-WP_000716763.1;Parent=gene-C9E97_RS02045;Dbxref=GenBank:WP_000716763.1;Name=WP_000716763.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459810.1;locus_tag=C9E97_RS02045;product=outer membrane protein OmpX;protein_id=WP_000716763.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	14827	16407	.	-	.	ID=gene-C9E97_RS02050;Name=C9E97_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02050;old_locus_tag=C9E97_02105
NZ_PYKA01000021.1	Protein Homology	CDS	14827	16407	.	-	0	ID=cds-WP_135369606.1;Parent=gene-C9E97_RS02050;Dbxref=GenBank:WP_135369606.1;Name=WP_135369606.1;Ontology_term=GO:0009244,GO:1900727,GO:0016776;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459811.1;locus_tag=C9E97_RS02050;product=phosphoethanolamine transferase;protein_id=WP_135369606.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	16672	16800	.	-	.	ID=gene-C9E97_RS02055;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=C9E97_RS02055;old_locus_tag=C9E97_02110
NZ_PYKA01000021.1	Protein Homology	CDS	16672	16800	.	-	0	ID=cds-WP_001001755.1;Parent=gene-C9E97_RS02055;Dbxref=GenBank:WP_001001755.1;Name=WP_001001755.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=C9E97_RS02055;product=manganase accumulation protein MntS;protein_id=WP_001001755.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	16986	17459	.	+	.	ID=gene-C9E97_RS02060;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=C9E97_RS02060;old_locus_tag=C9E97_02115
NZ_PYKA01000021.1	Protein Homology	CDS	16986	17459	.	+	0	ID=cds-WP_000533542.1;Parent=gene-C9E97_RS02060;Dbxref=GenBank:WP_000533542.1;Name=WP_000533542.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459812.1;locus_tag=C9E97_RS02060;product=manganese-binding transcriptional regulator MntR;protein_id=WP_000533542.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	17456	18568	.	+	.	ID=gene-C9E97_RS02065;Name=C9E97_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02065;old_locus_tag=C9E97_02120
NZ_PYKA01000021.1	Protein Homology	CDS	17456	18568	.	+	0	ID=cds-WP_001046521.1;Parent=gene-C9E97_RS02065;Dbxref=GenBank:WP_001046521.1;Name=WP_001046521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459813.1;locus_tag=C9E97_RS02065;product=anion transporter;protein_id=WP_001046521.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	18612	19532	.	-	.	ID=gene-C9E97_RS02070;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=C9E97_RS02070;old_locus_tag=C9E97_02125
NZ_PYKA01000021.1	Protein Homology	CDS	18612	19532	.	-	0	ID=cds-WP_001056404.1;Parent=gene-C9E97_RS02070;Dbxref=GenBank:WP_001056404.1;Name=WP_001056404.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459814.1;locus_tag=C9E97_RS02070;product=L%2CD-transpeptidase;protein_id=WP_001056404.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	19752	21344	.	+	.	ID=gene-C9E97_RS02075;Name=C9E97_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02075;old_locus_tag=C9E97_02130
NZ_PYKA01000021.1	Protein Homology	CDS	19752	21344	.	+	0	ID=cds-WP_135420068.1;Parent=gene-C9E97_RS02075;Dbxref=GenBank:WP_135420068.1;Name=WP_135420068.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459815.1;locus_tag=C9E97_RS02075;product=ABC-F family ATPase;protein_id=WP_135420068.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	21744	22487	.	+	.	ID=gene-C9E97_RS02080;Name=C9E97_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02080;old_locus_tag=C9E97_02135
NZ_PYKA01000021.1	Protein Homology	CDS	21744	22487	.	+	0	ID=cds-WP_079961633.1;Parent=gene-C9E97_RS02080;Dbxref=GenBank:WP_079961633.1;Name=WP_079961633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459816.1;locus_tag=C9E97_RS02080;product=DUF4261 domain-containing protein;protein_id=WP_079961633.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	pseudogene	22516	23244	.	-	.	ID=gene-C9E97_RS02085;Name=C9E97_RS02085;end_range=23244,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS02085;old_locus_tag=C9E97_02140;partial=true;pseudo=true
NZ_PYKA01000021.1	Protein Homology	CDS	22516	23244	.	-	0	ID=cds-C9E97_RS02085;Parent=gene-C9E97_RS02085;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016787;end_range=23244,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000114249.1;locus_tag=C9E97_RS02085;partial=true;product=Cof-type HAD-IIB family hydrolase;pseudo=true;transl_table=11
NZ_PYKA01000021.1	RefSeq	pseudogene	23235	23318	.	+	.	ID=gene-C9E97_RS24030;Name=C9E97_RS24030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9E97_RS24030;old_locus_tag=C9E97_02145;partial=true;pseudo=true;start_range=.,23235
NZ_PYKA01000021.1	Protein Homology	CDS	23235	23318	.	+	0	ID=cds-C9E97_RS24030;Parent=gene-C9E97_RS24030;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961428.1;locus_tag=C9E97_RS24030;partial=true;product=hypothetical protein;pseudo=true;start_range=.,23235;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	23439	24704	.	-	.	ID=gene-C9E97_RS02090;Name=C9E97_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02090;old_locus_tag=C9E97_02150
NZ_PYKA01000021.1	Protein Homology	CDS	23439	24704	.	-	0	ID=cds-WP_001623289.1;Parent=gene-C9E97_RS02090;Dbxref=GenBank:WP_001623289.1;Name=WP_001623289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459818.1;locus_tag=C9E97_RS02090;product=DUF1479 domain-containing protein;protein_id=WP_001623289.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	24966	25775	.	+	.	ID=gene-C9E97_RS02095;Name=C9E97_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02095;old_locus_tag=C9E97_02155
NZ_PYKA01000021.1	Protein Homology	CDS	24966	25775	.	+	0	ID=cds-WP_000217910.1;Parent=gene-C9E97_RS02095;Dbxref=GenBank:WP_000217910.1;Name=WP_000217910.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459819.1;locus_tag=C9E97_RS02095;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000217910.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	25853	28285	.	-	.	ID=gene-C9E97_RS02100;Name=C9E97_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02100;old_locus_tag=C9E97_02160
NZ_PYKA01000021.1	Protein Homology	CDS	25853	28285	.	-	0	ID=cds-WP_135369350.1;Parent=gene-C9E97_RS02100;Dbxref=GenBank:WP_135369350.1;Name=WP_135369350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459820.1;locus_tag=C9E97_RS02100;product=glycyl radical protein;protein_id=WP_135369350.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	28291	29190	.	-	.	ID=gene-C9E97_RS02105;Name=C9E97_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02105;old_locus_tag=C9E97_02165
NZ_PYKA01000021.1	Protein Homology	CDS	28291	29190	.	-	0	ID=cds-WP_135369349.1;Parent=gene-C9E97_RS02105;Dbxref=GenBank:WP_135369349.1;Name=WP_135369349.1;Ontology_term=GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459821.1;locus_tag=C9E97_RS02105;product=glycyl-radical enzyme activating protein;protein_id=WP_135369349.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	29468	30217	.	-	.	ID=gene-C9E97_RS02110;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=C9E97_RS02110;old_locus_tag=C9E97_02170
NZ_PYKA01000021.1	Protein Homology	CDS	29468	30217	.	-	0	ID=cds-WP_001623292.1;Parent=gene-C9E97_RS02110;Dbxref=GenBank:WP_001623292.1;Name=WP_001623292.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459822.1;locus_tag=C9E97_RS02110;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_001623292.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	30217	31452	.	-	.	ID=gene-C9E97_RS02115;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=C9E97_RS02115;old_locus_tag=C9E97_02175
NZ_PYKA01000021.1	Protein Homology	CDS	30217	31452	.	-	0	ID=cds-WP_167850414.1;Parent=gene-C9E97_RS02115;Dbxref=GenBank:WP_167850414.1;Name=WP_167850414.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308932.1;locus_tag=C9E97_RS02115;product=molybdopterin molybdotransferase MoeA;protein_id=WP_167850414.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	31656	32597	.	+	.	ID=gene-C9E97_RS02120;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=C9E97_RS02120;old_locus_tag=C9E97_02180
NZ_PYKA01000021.1	Protein Homology	CDS	31656	32597	.	+	0	ID=cds-WP_001030503.1;Parent=gene-C9E97_RS02120;Dbxref=GenBank:WP_001030503.1;Name=WP_001030503.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459824.1;locus_tag=C9E97_RS02120;product=beta-aspartyl-peptidase;protein_id=WP_001030503.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	32608	34479	.	+	.	ID=gene-C9E97_RS02125;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=C9E97_RS02125;old_locus_tag=C9E97_02185
NZ_PYKA01000021.1	Protein Homology	CDS	32608	34479	.	+	0	ID=cds-WP_001120599.1;Parent=gene-C9E97_RS02125;Dbxref=GenBank:WP_001120599.1;Name=WP_001120599.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459825.1;locus_tag=C9E97_RS02125;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_001120599.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	34512	36050	.	+	.	ID=gene-C9E97_RS02130;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=C9E97_RS02130;old_locus_tag=C9E97_02190
NZ_PYKA01000021.1	Protein Homology	CDS	34512	36050	.	+	0	ID=cds-WP_000191427.1;Parent=gene-C9E97_RS02130;Dbxref=GenBank:WP_000191427.1;Name=WP_000191427.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459826.1;locus_tag=C9E97_RS02130;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_000191427.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	36111	37031	.	+	.	ID=gene-C9E97_RS02135;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=C9E97_RS02135;old_locus_tag=C9E97_02195
NZ_PYKA01000021.1	Protein Homology	CDS	36111	37031	.	+	0	ID=cds-WP_000936067.1;Parent=gene-C9E97_RS02135;Dbxref=GenBank:WP_000936067.1;Name=WP_000936067.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459827.1;locus_tag=C9E97_RS02135;product=glutathione ABC transporter permease GsiC;protein_id=WP_000936067.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	37034	37945	.	+	.	ID=gene-C9E97_RS02140;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=C9E97_RS02140;old_locus_tag=C9E97_02200
NZ_PYKA01000021.1	Protein Homology	CDS	37034	37945	.	+	0	ID=cds-WP_001236024.1;Parent=gene-C9E97_RS02140;Dbxref=GenBank:WP_001236024.1;Name=WP_001236024.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459828.1;locus_tag=C9E97_RS02140;product=glutathione ABC transporter permease GsiD;protein_id=WP_001236024.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	38036	39361	.	-	.	ID=gene-C9E97_RS02145;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=C9E97_RS02145;old_locus_tag=C9E97_02205
NZ_PYKA01000021.1	Protein Homology	CDS	38036	39361	.	-	0	ID=cds-WP_000073317.1;Parent=gene-C9E97_RS02145;Dbxref=GenBank:WP_000073317.1;Name=WP_000073317.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459829.1;locus_tag=C9E97_RS02145;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_000073317.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	39592	39975	.	+	.	ID=gene-C9E97_RS02150;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=C9E97_RS02150;old_locus_tag=C9E97_02210
NZ_PYKA01000021.1	Protein Homology	CDS	39592	39975	.	+	0	ID=cds-WP_000259648.1;Parent=gene-C9E97_RS02150;Dbxref=GenBank:WP_000259648.1;Name=WP_000259648.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459830.1;locus_tag=C9E97_RS02150;product=biofilm formation regulator BssR;protein_id=WP_000259648.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	40094	41215	.	+	.	ID=gene-C9E97_RS02155;Name=C9E97_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02155;old_locus_tag=C9E97_02215
NZ_PYKA01000021.1	Protein Homology	CDS	40094	41215	.	+	0	ID=cds-WP_135369347.1;Parent=gene-C9E97_RS02155;Dbxref=GenBank:WP_135369347.1;Name=WP_135369347.1;Ontology_term=GO:0016901,GO:0070968;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA,pyrroloquinoline quinone binding|0070968||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252732.1;locus_tag=C9E97_RS02155;product=PQQ-dependent sugar dehydrogenase;protein_id=WP_135369347.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	41212	41838	.	-	.	ID=gene-C9E97_RS02160;Name=C9E97_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02160;old_locus_tag=C9E97_02220
NZ_PYKA01000021.1	Protein Homology	CDS	41212	41838	.	-	0	ID=cds-WP_000631907.1;Parent=gene-C9E97_RS02160;Dbxref=GenBank:WP_000631907.1;Name=WP_000631907.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459839.1;locus_tag=C9E97_RS02160;product=glutathione S-transferase family protein;protein_id=WP_000631907.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	42082	43284	.	+	.	ID=gene-C9E97_RS02165;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=C9E97_RS02165;old_locus_tag=C9E97_02225
NZ_PYKA01000021.1	Protein Homology	CDS	42082	43284	.	+	0	ID=cds-WP_000195712.1;Parent=gene-C9E97_RS02165;Dbxref=GenBank:WP_000195712.1;Name=WP_000195712.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459840.1;locus_tag=C9E97_RS02165;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_000195712.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	43330	44088	.	-	.	ID=gene-C9E97_RS02170;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=C9E97_RS02170;old_locus_tag=C9E97_02230
NZ_PYKA01000021.1	Protein Homology	CDS	43330	44088	.	-	0	ID=cds-WP_000450106.1;Parent=gene-C9E97_RS02170;Dbxref=GenBank:WP_000450106.1;Name=WP_000450106.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459841.1;locus_tag=C9E97_RS02170;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_000450106.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	44160	44768	.	-	.	ID=gene-C9E97_RS02175;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=C9E97_RS02175;old_locus_tag=C9E97_02235
NZ_PYKA01000021.1	Protein Homology	CDS	44160	44768	.	-	0	ID=cds-WP_001531378.1;Parent=gene-C9E97_RS02175;Dbxref=GenBank:WP_001531378.1;Name=WP_001531378.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459842.1;locus_tag=C9E97_RS02175;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001531378.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	45081	46313	.	+	.	ID=gene-C9E97_RS02180;Name=C9E97_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02180;old_locus_tag=C9E97_02240
NZ_PYKA01000021.1	Protein Homology	CDS	45081	46313	.	+	0	ID=cds-WP_001181284.1;Parent=gene-C9E97_RS02180;Dbxref=GenBank:WP_001181284.1;Name=WP_001181284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459843.1;locus_tag=C9E97_RS02180;product=MFS transporter;protein_id=WP_001181284.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	46367	47182	.	-	.	ID=gene-C9E97_RS02185;Name=C9E97_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02185;old_locus_tag=C9E97_02245
NZ_PYKA01000021.1	Protein Homology	CDS	46367	47182	.	-	0	ID=cds-WP_079841890.1;Parent=gene-C9E97_RS02185;Dbxref=GenBank:WP_079841890.1;Name=WP_079841890.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459844.1;locus_tag=C9E97_RS02185;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_079841890.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	47179	48390	.	-	.	ID=gene-C9E97_RS02190;Name=C9E97_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02190;old_locus_tag=C9E97_02250
NZ_PYKA01000021.1	Protein Homology	CDS	47179	48390	.	-	0	ID=cds-WP_000217420.1;Parent=gene-C9E97_RS02190;Dbxref=GenBank:WP_000217420.1;Name=WP_000217420.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459845.1;locus_tag=C9E97_RS02190;product=MFS transporter;protein_id=WP_000217420.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	48558	49178	.	+	.	ID=gene-C9E97_RS02195;Name=C9E97_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02195;old_locus_tag=C9E97_02255
NZ_PYKA01000021.1	Protein Homology	CDS	48558	49178	.	+	0	ID=cds-WP_000661870.1;Parent=gene-C9E97_RS02195;Dbxref=GenBank:WP_000661870.1;Name=WP_000661870.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459846.1;locus_tag=C9E97_RS02195;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000661870.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	49295	50980	.	-	.	ID=gene-C9E97_RS02205;Name=C9E97_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02205;old_locus_tag=C9E97_02265
NZ_PYKA01000021.1	Protein Homology	CDS	49295	50980	.	-	0	ID=cds-WP_001024853.1;Parent=gene-C9E97_RS02205;Dbxref=GenBank:WP_001024853.1;Name=WP_001024853.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=C9E97_RS02205;product=aspartate:alanine antiporter;protein_id=WP_001024853.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	51251	51628	.	+	.	ID=gene-C9E97_RS02210;Name=C9E97_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02210;old_locus_tag=C9E97_02275
NZ_PYKA01000021.1	Protein Homology	CDS	51251	51628	.	+	0	ID=cds-WP_000680850.1;Parent=gene-C9E97_RS02210;Dbxref=GenBank:WP_000680850.1;Name=WP_000680850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459848.1;locus_tag=C9E97_RS02210;product=inner membrane protein YbjM;protein_id=WP_000680850.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	51660	51923	.	-	.	ID=gene-C9E97_RS02215;Name=C9E97_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02215;old_locus_tag=C9E97_02280
NZ_PYKA01000021.1	Protein Homology	CDS	51660	51923	.	-	0	ID=cds-WP_000495513.1;Parent=gene-C9E97_RS02215;Dbxref=GenBank:WP_000495513.1;Name=WP_000495513.1;Ontology_term=GO:0045454,GO:0009055,GO:0015035;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459849.1;locus_tag=C9E97_RS02215;product=GrxA family glutaredoxin;protein_id=WP_000495513.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	52093	52383	.	+	.	ID=gene-C9E97_RS02220;Name=C9E97_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02220;old_locus_tag=C9E97_02285
NZ_PYKA01000021.1	Protein Homology	CDS	52093	52383	.	+	0	ID=cds-WP_001259137.1;Parent=gene-C9E97_RS02220;Dbxref=GenBank:WP_001259137.1;Name=WP_001259137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459850.1;locus_tag=C9E97_RS02220;product=YbjC family protein;protein_id=WP_001259137.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	52367	53089	.	+	.	ID=gene-C9E97_RS02225;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=C9E97_RS02225;old_locus_tag=C9E97_02290
NZ_PYKA01000021.1	Protein Homology	CDS	52367	53089	.	+	0	ID=cds-WP_000075300.1;Parent=gene-C9E97_RS02225;Dbxref=GenBank:WP_000075300.1;Name=WP_000075300.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459851.1;locus_tag=C9E97_RS02225;product=nitroreductase NfsA;protein_id=WP_000075300.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	53147	54049	.	+	.	ID=gene-C9E97_RS02230;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=C9E97_RS02230;old_locus_tag=C9E97_02295
NZ_PYKA01000021.1	Protein Homology	CDS	53147	54049	.	+	0	ID=cds-WP_000684361.1;Parent=gene-C9E97_RS02230;Dbxref=GenBank:WP_000684361.1;Name=WP_000684361.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459852.1;locus_tag=C9E97_RS02230;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_000684361.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	54145	54621	.	+	.	ID=gene-C9E97_RS02235;Name=C9E97_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02235;old_locus_tag=C9E97_02300
NZ_PYKA01000021.1	Protein Homology	CDS	54145	54621	.	+	0	ID=cds-WP_001578844.1;Parent=gene-C9E97_RS02235;Dbxref=GenBank:WP_001578844.1;Name=WP_001578844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459853.1;locus_tag=C9E97_RS02235;product=YbjN domain-containing protein;protein_id=WP_001578844.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	54970	56082	.	+	.	ID=gene-C9E97_RS02240;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=C9E97_RS02240;old_locus_tag=C9E97_02305
NZ_PYKA01000021.1	Protein Homology	CDS	54970	56082	.	+	0	ID=cds-WP_135369351.1;Parent=gene-C9E97_RS02240;Dbxref=GenBank:WP_135369351.1;Name=WP_135369351.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459854.1;locus_tag=C9E97_RS02240;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_135369351.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	56170	57303	.	+	.	ID=gene-C9E97_RS02245;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=C9E97_RS02245;old_locus_tag=C9E97_02310
NZ_PYKA01000021.1	Protein Homology	CDS	56170	57303	.	+	0	ID=cds-WP_001000698.1;Parent=gene-C9E97_RS02245;Dbxref=GenBank:WP_001000698.1;Name=WP_001000698.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=C9E97_RS02245;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_001000698.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	57313	58266	.	+	.	ID=gene-C9E97_RS02250;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=C9E97_RS02250;old_locus_tag=C9E97_02315
NZ_PYKA01000021.1	Protein Homology	CDS	57313	58266	.	+	0	ID=cds-WP_135369346.1;Parent=gene-C9E97_RS02250;Dbxref=GenBank:WP_135369346.1;Name=WP_135369346.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459856.1;locus_tag=C9E97_RS02250;product=putrescine ABC transporter permease PotH;protein_id=WP_135369346.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	58263	59108	.	+	.	ID=gene-C9E97_RS02255;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=C9E97_RS02255;old_locus_tag=C9E97_02320
NZ_PYKA01000021.1	Protein Homology	CDS	58263	59108	.	+	0	ID=cds-WP_001061629.1;Parent=gene-C9E97_RS02255;Dbxref=GenBank:WP_001061629.1;Name=WP_001061629.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459857.1;locus_tag=C9E97_RS02255;product=putrescine ABC transporter permease PotI;protein_id=WP_001061629.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	59182	59655	.	+	.	ID=gene-C9E97_RS02260;Name=C9E97_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02260;old_locus_tag=C9E97_02325
NZ_PYKA01000021.1	Protein Homology	CDS	59182	59655	.	+	0	ID=cds-WP_000505788.1;Parent=gene-C9E97_RS02260;Dbxref=GenBank:WP_000505788.1;Name=WP_000505788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459858.1;locus_tag=C9E97_RS02260;product=YbjO family protein;protein_id=WP_000505788.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	59698	60825	.	+	.	ID=gene-C9E97_RS02265;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=C9E97_RS02265;old_locus_tag=C9E97_02330
NZ_PYKA01000021.1	Protein Homology	CDS	59698	60825	.	+	0	ID=cds-WP_061376480.1;Parent=gene-C9E97_RS02265;Dbxref=GenBank:WP_061376480.1;Name=WP_061376480.1;Ontology_term=GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149796.1;locus_tag=C9E97_RS02265;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_061376480.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	61120	62463	.	+	.	ID=gene-C9E97_RS02270;Name=C9E97_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02270;old_locus_tag=C9E97_02335
NZ_PYKA01000021.1	Protein Homology	CDS	61120	62463	.	+	0	ID=cds-WP_000399323.1;Parent=gene-C9E97_RS02270;Dbxref=GenBank:WP_000399323.1;Name=WP_000399323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459860.1;locus_tag=C9E97_RS02270;product=PTS sugar transporter subunit IIC;protein_id=WP_000399323.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	62493	62813	.	+	.	ID=gene-C9E97_RS02275;Name=C9E97_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02275;old_locus_tag=C9E97_02340
NZ_PYKA01000021.1	Protein Homology	CDS	62493	62813	.	+	0	ID=cds-WP_000655399.1;Parent=gene-C9E97_RS02275;Dbxref=GenBank:WP_000655399.1;Name=WP_000655399.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459861.1;locus_tag=C9E97_RS02275;product=PTS sugar transporter subunit IIB;protein_id=WP_000655399.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	62823	64310	.	+	.	ID=gene-C9E97_RS02280;Name=C9E97_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02280;old_locus_tag=C9E97_02345
NZ_PYKA01000021.1	Protein Homology	CDS	62823	64310	.	+	0	ID=cds-WP_000644018.1;Parent=gene-C9E97_RS02280;Dbxref=GenBank:WP_000644018.1;Name=WP_000644018.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459862.1;locus_tag=C9E97_RS02280;product=sulfatase;protein_id=WP_000644018.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	64529	65260	.	-	.	ID=gene-C9E97_RS02285;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=C9E97_RS02285;old_locus_tag=C9E97_02355
NZ_PYKA01000021.1	Protein Homology	CDS	64529	65260	.	-	0	ID=cds-WP_000737538.1;Parent=gene-C9E97_RS02285;Dbxref=GenBank:WP_000737538.1;Name=WP_000737538.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459863.1;locus_tag=C9E97_RS02285;product=arginine ABC transporter substrate-binding protein ArtJ;protein_id=WP_000737538.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	65497	66165	.	-	.	ID=gene-C9E97_RS02290;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=C9E97_RS02290;old_locus_tag=C9E97_02360
NZ_PYKA01000021.1	Protein Homology	CDS	65497	66165	.	-	0	ID=cds-WP_000895396.1;Parent=gene-C9E97_RS02290;Dbxref=GenBank:WP_000895396.1;Name=WP_000895396.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459864.1;locus_tag=C9E97_RS02290;product=arginine ABC transporter permease ArtM;protein_id=WP_000895396.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	66165	66881	.	-	.	ID=gene-C9E97_RS02295;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=C9E97_RS02295;old_locus_tag=C9E97_02365
NZ_PYKA01000021.1	Protein Homology	CDS	66165	66881	.	-	0	ID=cds-WP_001001677.1;Parent=gene-C9E97_RS02295;Dbxref=GenBank:WP_001001677.1;Name=WP_001001677.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459865.1;locus_tag=C9E97_RS02295;product=arginine ABC transporter permease ArtQ;protein_id=WP_001001677.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	66888	67619	.	-	.	ID=gene-C9E97_RS02300;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=C9E97_RS02300;old_locus_tag=C9E97_02370
NZ_PYKA01000021.1	Protein Homology	CDS	66888	67619	.	-	0	ID=cds-WP_000756586.1;Parent=gene-C9E97_RS02300;Dbxref=GenBank:WP_000756586.1;Name=WP_000756586.1;Ontology_term=GO:0015424,GO:0043190;gbkey=CDS;gene=artI;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type amino acid transporter activity|0015424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459866.1;locus_tag=C9E97_RS02300;product=arginine ABC transporter substrate-binding protein ArtI;protein_id=WP_000756586.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	67637	68365	.	-	.	ID=gene-C9E97_RS02305;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=C9E97_RS02305;old_locus_tag=C9E97_02375
NZ_PYKA01000021.1	Protein Homology	CDS	67637	68365	.	-	0	ID=cds-WP_000027186.1;Parent=gene-C9E97_RS02305;Dbxref=GenBank:WP_000027186.1;Name=WP_000027186.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=C9E97_RS02305;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_000027186.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	68595	69110	.	-	.	ID=gene-C9E97_RS02310;Name=C9E97_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02310;old_locus_tag=C9E97_02380
NZ_PYKA01000021.1	Protein Homology	CDS	68595	69110	.	-	0	ID=cds-WP_001270724.1;Parent=gene-C9E97_RS02310;Dbxref=GenBank:WP_001270724.1;Name=WP_001270724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459868.1;locus_tag=C9E97_RS02310;product=lipoprotein;protein_id=WP_001270724.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	69238	69561	.	+	.	ID=gene-C9E97_RS02315;Name=C9E97_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02315;old_locus_tag=C9E97_02385
NZ_PYKA01000021.1	Protein Homology	CDS	69238	69561	.	+	0	ID=cds-WP_001160725.1;Parent=gene-C9E97_RS02315;Dbxref=GenBank:WP_001160725.1;Name=WP_001160725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=C9E97_RS02315;product=heavy metal-binding domain-containing protein;protein_id=WP_001160725.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	69558	70388	.	+	.	ID=gene-C9E97_RS02320;Name=C9E97_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02320;old_locus_tag=C9E97_02390
NZ_PYKA01000021.1	Protein Homology	CDS	69558	70388	.	+	0	ID=cds-WP_000645850.1;Parent=gene-C9E97_RS02320;Dbxref=GenBank:WP_000645850.1;Name=WP_000645850.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745,GO:0042834,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459908.1;locus_tag=C9E97_RS02320;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_000645850.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	70385	71398	.	-	.	ID=gene-C9E97_RS02325;Name=C9E97_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02325;old_locus_tag=C9E97_02395
NZ_PYKA01000021.1	Protein Homology	CDS	70385	71398	.	-	0	ID=cds-WP_000866905.1;Parent=gene-C9E97_RS02325;Dbxref=GenBank:WP_000866905.1;Name=WP_000866905.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459909.1;locus_tag=C9E97_RS02325;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_000866905.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	71494	72927	.	-	.	ID=gene-C9E97_RS02330;Name=C9E97_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02330;old_locus_tag=C9E97_02400
NZ_PYKA01000021.1	Protein Homology	CDS	71494	72927	.	-	0	ID=cds-WP_135369248.1;Parent=gene-C9E97_RS02330;Dbxref=GenBank:WP_135369248.1;Name=WP_135369248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459910.1;locus_tag=C9E97_RS02330;product=SDR family oxidoreductase;protein_id=WP_135369248.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	72938	73939	.	-	.	ID=gene-C9E97_RS02335;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=C9E97_RS02335;old_locus_tag=C9E97_02405
NZ_PYKA01000021.1	Protein Homology	CDS	72938	73939	.	-	0	ID=cds-WP_000566346.1;Parent=gene-C9E97_RS02335;Dbxref=GenBank:WP_000566346.1;Name=WP_000566346.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459911.1;locus_tag=C9E97_RS02335;product=low-specificity L-threonine aldolase;protein_id=WP_000566346.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	73978	75696	.	-	.	ID=gene-C9E97_RS02340;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=C9E97_RS02340;old_locus_tag=C9E97_02410
NZ_PYKA01000021.1	Protein Homology	CDS	73978	75696	.	-	0	ID=cds-WP_000815324.1;Parent=gene-C9E97_RS02340;Dbxref=GenBank:WP_000815324.1;Name=WP_000815324.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459912.1;locus_tag=C9E97_RS02340;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_000815324.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	75854	76822	.	-	.	ID=gene-C9E97_RS02345;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=C9E97_RS02345;old_locus_tag=C9E97_02415
NZ_PYKA01000021.1	Protein Homology	CDS	75854	76822	.	-	0	ID=cds-WP_023216393.1;Parent=gene-C9E97_RS02345;Dbxref=GenBank:WP_023216393.1;Name=WP_023216393.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308985.1;locus_tag=C9E97_RS02345;product=NADH oxidoreductase;protein_id=WP_023216393.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	76834	78486	.	-	.	ID=gene-C9E97_RS02350;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=C9E97_RS02350;old_locus_tag=C9E97_02420
NZ_PYKA01000021.1	Protein Homology	CDS	76834	78486	.	-	0	ID=cds-WP_000458785.1;Parent=gene-C9E97_RS02350;Dbxref=GenBank:WP_000458785.1;Name=WP_000458785.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=C9E97_RS02350;product=hydroxylamine reductase;protein_id=WP_000458785.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	78630	79529	.	-	.	ID=gene-C9E97_RS02355;Name=C9E97_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02355;old_locus_tag=C9E97_02425
NZ_PYKA01000021.1	Protein Homology	CDS	78630	79529	.	-	0	ID=cds-WP_135369247.1;Parent=gene-C9E97_RS02355;Dbxref=GenBank:WP_135369247.1;Name=WP_135369247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459915.1;locus_tag=C9E97_RS02355;product=lysine exporter LysO family protein;protein_id=WP_135369247.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	79731	81389	.	+	.	ID=gene-C9E97_RS02360;Name=C9E97_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02360;old_locus_tag=C9E97_02435
NZ_PYKA01000021.1	Protein Homology	CDS	79731	81389	.	+	0	ID=cds-WP_000599770.1;Parent=gene-C9E97_RS02360;Dbxref=GenBank:WP_000599770.1;Name=WP_000599770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459916.2;locus_tag=C9E97_RS02360;product=ATP-dependent endonuclease;protein_id=WP_000599770.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	81386	82336	.	-	.	ID=gene-C9E97_RS02365;Name=C9E97_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02365;old_locus_tag=C9E97_02440
NZ_PYKA01000021.1	Protein Homology	CDS	81386	82336	.	-	0	ID=cds-WP_001537300.1;Parent=gene-C9E97_RS02365;Dbxref=GenBank:WP_001537300.1;Name=WP_001537300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519667.1;locus_tag=C9E97_RS02365;product=VirK/YbjX family protein;protein_id=WP_001537300.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	82482	83600	.	+	.	ID=gene-C9E97_RS02370;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=C9E97_RS02370;old_locus_tag=C9E97_02445
NZ_PYKA01000021.1	Protein Homology	CDS	82482	83600	.	+	0	ID=cds-WP_001201750.1;Parent=gene-C9E97_RS02370;Dbxref=GenBank:WP_001201750.1;Name=WP_001201750.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459918.1;locus_tag=C9E97_RS02370;product=macrolide transporter subunit MacA;protein_id=WP_001201750.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	83597	85543	.	+	.	ID=gene-C9E97_RS02375;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=C9E97_RS02375;old_locus_tag=C9E97_02450
NZ_PYKA01000021.1	Protein Homology	CDS	83597	85543	.	+	0	ID=cds-WP_080232592.1;Parent=gene-C9E97_RS02375;Dbxref=GenBank:WP_080232592.1;Name=WP_080232592.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459919.1;locus_tag=C9E97_RS02375;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_080232592.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	85673	85894	.	-	.	ID=gene-C9E97_RS02380;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=C9E97_RS02380;old_locus_tag=C9E97_02460
NZ_PYKA01000021.1	Protein Homology	CDS	85673	85894	.	-	0	ID=cds-WP_000447499.1;Parent=gene-C9E97_RS02380;Dbxref=GenBank:WP_000447499.1;Name=WP_000447499.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459920.1;locus_tag=C9E97_RS02380;product=cold shock-like protein CspD;protein_id=WP_000447499.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	86045	86122	.	+	.	ID=gene-C9E97_RS23655;Name=C9E97_RS23655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS23655
NZ_PYKA01000021.1	Protein Homology	CDS	86045	86122	.	+	0	ID=cds-WP_212742690.1;Parent=gene-C9E97_RS23655;Dbxref=GenBank:WP_212742690.1;Name=WP_212742690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=C9E97_RS23655;product=hypothetical protein;protein_id=WP_212742690.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	86218	86538	.	+	.	ID=gene-C9E97_RS02385;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=C9E97_RS02385;old_locus_tag=C9E97_02465
NZ_PYKA01000021.1	Protein Homology	CDS	86218	86538	.	+	0	ID=cds-WP_000520789.1;Parent=gene-C9E97_RS02385;Dbxref=GenBank:WP_000520789.1;Name=WP_000520789.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=C9E97_RS02385;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_000520789.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	86569	88845	.	+	.	ID=gene-C9E97_RS02390;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=C9E97_RS02390;old_locus_tag=C9E97_02470
NZ_PYKA01000021.1	Protein Homology	CDS	86569	88845	.	+	0	ID=cds-WP_000934064.1;Parent=gene-C9E97_RS02390;Dbxref=GenBank:WP_000934064.1;Name=WP_000934064.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459922.1;locus_tag=C9E97_RS02390;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_000934064.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	89034	89121	.	-	.	ID=gene-C9E97_RS02395;Name=C9E97_RS02395;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9E97_RS02395;old_locus_tag=C9E97_02475
NZ_PYKA01000021.1	tRNAscan-SE	tRNA	89034	89121	.	-	.	ID=rna-C9E97_RS02395;Parent=gene-C9E97_RS02395;anticodon=(pos:complement(89085..89087));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS02395;product=tRNA-Ser
NZ_PYKA01000021.1	tRNAscan-SE	exon	89034	89121	.	-	.	ID=exon-C9E97_RS02395-1;Parent=rna-C9E97_RS02395;anticodon=(pos:complement(89085..89087));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=C9E97_RS02395;product=tRNA-Ser
NZ_PYKA01000021.1	RefSeq	gene	89269	89946	.	-	.	ID=gene-C9E97_RS02400;Name=C9E97_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02400;old_locus_tag=C9E97_02480
NZ_PYKA01000021.1	Protein Homology	CDS	89269	89946	.	-	0	ID=cds-WP_000097893.1;Parent=gene-C9E97_RS02400;Dbxref=GenBank:WP_000097893.1;Name=WP_000097893.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459926.1;locus_tag=C9E97_RS02400;product=hydrolase;protein_id=WP_000097893.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	89966	90826	.	-	.	ID=gene-C9E97_RS02405;Name=C9E97_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02405;old_locus_tag=C9E97_02485
NZ_PYKA01000021.1	Protein Homology	CDS	89966	90826	.	-	0	ID=cds-WP_000809969.1;Parent=gene-C9E97_RS02405;Dbxref=GenBank:WP_000809969.1;Name=WP_000809969.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459927.1;locus_tag=C9E97_RS02405;product=pirin family protein;protein_id=WP_000809969.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	90935	91846	.	+	.	ID=gene-C9E97_RS02410;Name=C9E97_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9E97_RS02410;old_locus_tag=C9E97_02490
NZ_PYKA01000021.1	Protein Homology	CDS	90935	91846	.	+	0	ID=cds-WP_000597928.1;Parent=gene-C9E97_RS02410;Dbxref=GenBank:WP_000597928.1;Name=WP_000597928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459928.1;locus_tag=C9E97_RS02410;product=LysR family transcriptional regulator;protein_id=WP_000597928.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	91937	92155	.	-	.	ID=gene-C9E97_RS02415;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=C9E97_RS02415;old_locus_tag=C9E97_02495
NZ_PYKA01000021.1	Protein Homology	CDS	91937	92155	.	-	0	ID=cds-WP_001040187.1;Parent=gene-C9E97_RS02415;Dbxref=GenBank:WP_001040187.1;Name=WP_001040187.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=C9E97_RS02415;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	92467	93171	.	-	.	ID=gene-C9E97_RS02425;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=C9E97_RS02425;old_locus_tag=C9E97_02505
NZ_PYKA01000021.1	Protein Homology	CDS	92467	93171	.	-	0	ID=cds-WP_023218059.1;Parent=gene-C9E97_RS02425;Dbxref=GenBank:WP_023218059.1;Name=WP_023218059.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459931.1;locus_tag=C9E97_RS02425;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_023218059.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	93216	94937	.	-	.	ID=gene-C9E97_RS02430;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=C9E97_RS02430;old_locus_tag=C9E97_02510
NZ_PYKA01000021.1	Protein Homology	CDS	93216	94937	.	-	0	ID=cds-WP_001202257.1;Parent=gene-C9E97_RS02430;Dbxref=GenBank:WP_001202257.1;Name=WP_001202257.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459932.1;locus_tag=C9E97_RS02430;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_001202257.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	94938	96704	.	-	.	ID=gene-C9E97_RS02435;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=C9E97_RS02435;old_locus_tag=C9E97_02515
NZ_PYKA01000021.1	Protein Homology	CDS	94938	96704	.	-	0	ID=cds-WP_001044545.1;Parent=gene-C9E97_RS02435;Dbxref=GenBank:WP_001044545.1;Name=WP_001044545.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459933.1;locus_tag=C9E97_RS02435;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_001044545.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	96818	97786	.	-	.	ID=gene-C9E97_RS02440;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=C9E97_RS02440;old_locus_tag=C9E97_02520
NZ_PYKA01000021.1	Protein Homology	CDS	96818	97786	.	-	0	ID=cds-WP_000537407.1;Parent=gene-C9E97_RS02440;Dbxref=GenBank:WP_000537407.1;Name=WP_000537407.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459934.1;locus_tag=C9E97_RS02440;product=thioredoxin-disulfide reductase;protein_id=WP_000537407.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	98333	98827	.	+	.	ID=gene-C9E97_RS02445;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=C9E97_RS02445;old_locus_tag=C9E97_02530
NZ_PYKA01000021.1	Protein Homology	CDS	98333	98827	.	+	0	ID=cds-WP_000228469.1;Parent=gene-C9E97_RS02445;Dbxref=GenBank:WP_000228469.1;Name=WP_000228469.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=C9E97_RS02445;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228469.1;transl_table=11
NZ_PYKA01000021.1	RefSeq	gene	98962	101405	.	+	.	ID=gene-C9E97_RS02450;Name=ftsK;end_range=101405,.;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=C9E97_RS02450;old_locus_tag=C9E97_02535;partial=true
NZ_PYKA01000021.1	Protein Homology	CDS	98962	101405	.	+	0	ID=cds-WP_135495692.1;Parent=gene-C9E97_RS02450;Dbxref=GenBank:WP_135495692.1;Name=WP_135495692.1;Ontology_term=GO:0003677,GO:0005524;end_range=101405,.;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=C9E97_RS02450;partial=true;product=DNA translocase FtsK;protein_id=WP_135495692.1;transl_table=11
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